BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015370
(408 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255563224|ref|XP_002522615.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538091|gb|EEF39702.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 426
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 289/407 (71%), Positives = 342/407 (84%), Gaps = 4/407 (0%)
Query: 1 MAARSFFLGLRRAS--NTKIKNRPNSDYECFFYSRFLSSGSSQNECLDEETSNSDGKDDL 58
MA+RSF L+R N+ I + NS + + ++ FLSSG+ +NE L EE+S+ + +DDL
Sbjct: 19 MASRSFLFNLQRICRINSGIGSLSNS--KKWEFNHFLSSGTLRNEVLAEESSSKEIEDDL 76
Query: 59 KSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHK 118
KSRIFR+ LPKRSATN+I WVSEGN T SELR+I ELRK QRYKHALEISEWMVT+K
Sbjct: 77 KSRIFRLRLPKRSATNIIHNWVSEGNTVTASELRNISNELRKLQRYKHALEISEWMVTNK 136
Query: 119 EFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEE 178
EF L D DYATRIDLMTKVFGI + ERYFEGLP++ KTSETYTALLH YAG K KAEE
Sbjct: 137 EFELMDFDYATRIDLMTKVFGIDAAERYFEGLPITVKTSETYTALLHSYAGVKQLGKAEE 196
Query: 179 LFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCA 238
L+ER+K SNLSF AL YNEMMTLYMSVGQVEKV+LVVEE+KR+ + PDIFTYNLWISSCA
Sbjct: 197 LYERIKGSNLSFTALTYNEMMTLYMSVGQVEKVSLVVEELKRQKIAPDIFTYNLWISSCA 256
Query: 239 ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQ 298
A LNIDQV + LDEM DSG +DDW++Y+++ NIY+ A HLVN ESS +VEAEKSITQR+
Sbjct: 257 AILNIDQVTRILDEMKHDSGCNDDWLRYIDIANIYVKAGHLVNTESSAVVEAEKSITQRE 316
Query: 299 WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 358
WITYDFLIILYAGL +KDK+DQIWKSLRMTKQKMT+RN++CILSSY+MLGHLKE GE++D
Sbjct: 317 WITYDFLIILYAGLRDKDKVDQIWKSLRMTKQKMTNRNFVCILSSYMMLGHLKEAGEVLD 376
Query: 359 QWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 405
QWK+S T+DFD+SAC+RLL AFS GLTE AN+FHMLL+++NC PTN
Sbjct: 377 QWKKSTTTDFDLSACSRLLDAFSGSGLTEIANDFHMLLIERNCDPTN 423
>gi|224141193|ref|XP_002323959.1| predicted protein [Populus trichocarpa]
gi|222866961|gb|EEF04092.1| predicted protein [Populus trichocarpa]
Length = 355
Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust.
Identities = 266/351 (75%), Positives = 308/351 (87%), Gaps = 2/351 (0%)
Query: 53 DGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISE 112
+ +DDLK RIFR+ LPKRS TNVI +WV EGN + SELRHI KELRKSQR+KHALEISE
Sbjct: 5 ENEDDLKGRIFRLRLPKRSVTNVIDKWVREGNTVSSSELRHISKELRKSQRFKHALEISE 64
Query: 113 WMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKW 172
WMV H+EF LSD+D+A+RIDLMTKVFG+ + ERYF+GLPL+AKT+ETYTALLH YA AK
Sbjct: 65 WMVAHEEFELSDTDHASRIDLMTKVFGVDAAERYFDGLPLAAKTTETYTALLHSYAAAKL 124
Query: 173 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 232
EKAEE ++R+K SNL F ALMYNEMMTLYMSVGQ+EKV+ VVEE+K + V PDIFTYNL
Sbjct: 125 IEKAEEFYKRIKGSNLPFTALMYNEMMTLYMSVGQLEKVSQVVEELKHQKVAPDIFTYNL 184
Query: 233 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESST--LVEA 290
WISSCAA LNID+V++ LDEMS DSG +DDW++Y+ +VNIY+TA HLVNAESST +VEA
Sbjct: 185 WISSCAAALNIDKVRRILDEMSQDSGVNDDWMRYIKIVNIYVTAGHLVNAESSTAAVVEA 244
Query: 291 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 350
EK ITQR+WITYDFL+ILYAGLG KDKIDQIWKSLRMT QKMTSRN++CILSSYLMLGHL
Sbjct: 245 EKKITQREWITYDFLVILYAGLGKKDKIDQIWKSLRMTNQKMTSRNFVCILSSYLMLGHL 304
Query: 351 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 401
KEVGEI+DQWKQS T+DFDISACNRLL A S +GLTE AN FHMLL+++NC
Sbjct: 305 KEVGEIVDQWKQSTTTDFDISACNRLLDAISCLGLTEIANNFHMLLIERNC 355
>gi|356554749|ref|XP_003545705.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Glycine max]
Length = 399
Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust.
Identities = 268/403 (66%), Positives = 330/403 (81%), Gaps = 9/403 (2%)
Query: 1 MAARSFFLGLRRASNTKIKNRPNSDYECFF-YSRFLSSGSSQNECLDEETSNSDGKDDLK 59
MA RS FL LRR S+ + NS C +RF+SSG+ ++ ++E +G DDL+
Sbjct: 1 MAHRSLFLSLRRFSSCR-----NSGLACVLNRTRFVSSGAVSSDLVEESV---EGDDDLR 52
Query: 60 SRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKE 119
SRIFR+ LPKRSATNV+Q+WV +GN T+S+LR I KELR+SQRYKHALEISEWMV+++E
Sbjct: 53 SRIFRLRLPKRSATNVLQKWVLQGNPITLSQLRDISKELRRSQRYKHALEISEWMVSNEE 112
Query: 120 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEEL 179
+ LSDSDYA RIDLMT+VFGI + ERYFEGLPL+ KT+ETYTALLH YAGAK TEKAEEL
Sbjct: 113 YELSDSDYAVRIDLMTQVFGIDAAERYFEGLPLATKTTETYTALLHSYAGAKLTEKAEEL 172
Query: 180 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 239
++R+K SNLSF+AL YNEMMTLYMSVGQ EKV +VVEE+K++ V PDIFTYNLWISSCAA
Sbjct: 173 YQRIKDSNLSFDALTYNEMMTLYMSVGQFEKVPIVVEELKQQKVSPDIFTYNLWISSCAA 232
Query: 240 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 299
LNID+V++ LDEMS +G ++ W++Y+NL NIYI+ +HL NA S+TLVE EK ITQRQW
Sbjct: 233 ILNIDEVRRILDEMSHGAGSNESWIRYLNLANIYISVAHLDNASSNTLVETEKRITQRQW 292
Query: 300 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 359
ITYDFLIILY GLG+KDK+DQIW SL MTKQKM SRNY+CI+SSYLMLG KEVGE+IDQ
Sbjct: 293 ITYDFLIILYGGLGSKDKLDQIWNSLGMTKQKMISRNYMCIISSYLMLGLTKEVGEVIDQ 352
Query: 360 WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCA 402
WKQS T+DFD+ AC ++L AF D+GL E AN +++L++KN +
Sbjct: 353 WKQSTTTDFDMLACKKILVAFRDIGLAEIANNLNVILIEKNLS 395
>gi|356525847|ref|XP_003531533.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Glycine max]
Length = 395
Score = 556 bits (1434), Expect = e-156, Method: Compositional matrix adjust.
Identities = 268/403 (66%), Positives = 323/403 (80%), Gaps = 13/403 (3%)
Query: 1 MAARSFFLGLRRASNTKIKNRPNSDYECFF-YSRFLSSGSSQNECLDEETSNSDGKDDLK 59
MA S FL LRR NS C +RF+SSG+ ++ ++E D DDL+
Sbjct: 1 MAHCSLFLSLRR----------NSGLACLLNRTRFVSSGAVSSDLVEESVEGVD--DDLR 48
Query: 60 SRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKE 119
SRIFR+ LPKRSATNV+Q+WV +GN T+S+LR I KELR+SQRYKHALEISEWMV+H+E
Sbjct: 49 SRIFRLRLPKRSATNVLQKWVLQGNPVTLSQLRDISKELRRSQRYKHALEISEWMVSHEE 108
Query: 120 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEEL 179
+ LSDSDYA RIDL TKVFGI + ERYFEGLPL+ KT+ETYTALLH YAGAK T+KAEEL
Sbjct: 109 YELSDSDYAARIDLTTKVFGIDAAERYFEGLPLATKTAETYTALLHSYAGAKLTKKAEEL 168
Query: 180 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 239
++R+K SNLSF+AL YNEMMTLYMSVGQ EKV VVEE+K++ V PDIFTYNLWIS CAA
Sbjct: 169 YQRIKDSNLSFDALTYNEMMTLYMSVGQFEKVPSVVEELKQQKVSPDIFTYNLWISYCAA 228
Query: 240 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 299
LNID+V++ LDEMS +G ++ W++Y+NL NIYI+ HL NA S+TLVE EK ITQRQW
Sbjct: 229 ILNIDEVRRILDEMSHGAGSNESWIRYLNLANIYISVGHLDNASSNTLVETEKRITQRQW 288
Query: 300 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 359
ITYDFLIILY GLG+KDK+DQIW SLRMTKQKM SRNYICI+SSYLMLGH KEVGE+IDQ
Sbjct: 289 ITYDFLIILYGGLGSKDKLDQIWNSLRMTKQKMISRNYICIISSYLMLGHTKEVGEVIDQ 348
Query: 360 WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCA 402
WKQS T+DFD+ AC +++ AF D+GL E AN +M+L++KN +
Sbjct: 349 WKQSTTTDFDMLACKKIMVAFRDMGLAEIANNLNMILIEKNLS 391
>gi|359484901|ref|XP_002268952.2| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial [Vitis vinifera]
Length = 396
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 270/410 (65%), Positives = 327/410 (79%), Gaps = 18/410 (4%)
Query: 1 MAARSFFLGLRRASNTKIKNRPNSDYECF---FYSRFLSSGSSQNECLDEETSNSDGKDD 57
M RS FLGL R +C F R LSS + ++E L EE+ NS DD
Sbjct: 1 MGTRSLFLGLTR--------------QCISEKFAFRLLSSRTLRSEVL-EESPNSPENDD 45
Query: 58 LKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTH 117
LKSRIF++ LPKRS TNV+QRW+ EGNQ +SELR+I KELR++QRYKHALEISEWMV+H
Sbjct: 46 LKSRIFKLRLPKRSVTNVLQRWLGEGNQVHISELRNISKELRRAQRYKHALEISEWMVSH 105
Query: 118 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 177
EF LSDSD A RIDLMT+VFGI + ERYFEGLP +AKTSETYTALLH YAGAK EKAE
Sbjct: 106 DEFELSDSDNAVRIDLMTRVFGIDAAERYFEGLPSAAKTSETYTALLHSYAGAKLAEKAE 165
Query: 178 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 237
EL+ER+K+SN+ N L+YNEMMTLYMSVGQVEKV+LVVEE+KR+ VVPD+FTYNLW+SSC
Sbjct: 166 ELYERIKESNVPLNILLYNEMMTLYMSVGQVEKVSLVVEELKRQKVVPDLFTYNLWVSSC 225
Query: 238 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 297
AATL+ID V++ L EMS +S +D WV+Y NL NIYI A HLVN+ S+++VEA + TQR
Sbjct: 226 AATLDIDGVRRILKEMSNNSSANDGWVRYRNLANIYIMAGHLVNSASNSVVEAGTNTTQR 285
Query: 298 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 357
WITYDFLIILYAGLGNKDKIDQIWKSL+MTKQK+ SR+Y+CILSSY+MLGH+K+VG +I
Sbjct: 286 DWITYDFLIILYAGLGNKDKIDQIWKSLKMTKQKIKSRSYVCILSSYVMLGHIKDVGIVI 345
Query: 358 DQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
D+WK+S T+DFDIS RLL AF+++ L E+A FH LL++K+C PT+ S
Sbjct: 346 DEWKKSTTTDFDISVFYRLLDAFAELRLIEEAETFHKLLIRKSCLPTDES 395
>gi|449438238|ref|XP_004136896.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Cucumis sativus]
gi|449478839|ref|XP_004155431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Cucumis sativus]
Length = 406
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 249/409 (60%), Positives = 323/409 (78%), Gaps = 6/409 (1%)
Query: 1 MAARSFFLGLRRAS---NTKIKNRPNSDYECFFYSRFLSSGSSQNECLDEETSNSDGKDD 57
MA+R+ FL R N K+ P + S + S G+ ++E DE + N + +D
Sbjct: 1 MASRALFLAFSRNRGFLNQSFKSTP--VFNEANVSNYCSHGALRSESFDE-SVNYEEFND 57
Query: 58 LKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTH 117
LKSRIF++ LPKRSA V++RW SEGNQ T++ELR+I KELRK QRYKHALEI EWMV+H
Sbjct: 58 LKSRIFQLRLPKRSAIRVLERWTSEGNQVTIAELRNISKELRKIQRYKHALEILEWMVSH 117
Query: 118 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 177
+ LSDSD+A RIDLMTKVFG+ + ERYFEGLP+ AKT ETYTALLH +AG+K T+KAE
Sbjct: 118 NQSELSDSDFAIRIDLMTKVFGVDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTDKAE 177
Query: 178 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 237
L+E++K+S++ AL +NEMMTLY S+GQVEKV+ +V+++K++ V PDIFTYNLWISS
Sbjct: 178 TLYEKMKESDIPLTALPFNEMMTLYTSIGQVEKVSSIVDDLKQRMVHPDIFTYNLWISSL 237
Query: 238 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 297
AA LNID VK+ L+EM+ + +++WV+Y+ LVNIY+ +++L+++ES+++VE+ I+QR
Sbjct: 238 AAALNIDGVKQILNEMNHNPNSNENWVRYIELVNIYVKSANLLHSESNSVVESVSGISQR 297
Query: 298 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 357
+WITYD LIILYAGLGNKDKIDQIW+SLRMTKQKMTSRNYICI+S YLML LKE+GE+I
Sbjct: 298 EWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICIVSCYLMLDDLKEIGEVI 357
Query: 358 DQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNA 406
DQWKQS T+DFDIS+CNRL+ AF + GL EKAN F +L+QKNC PT A
Sbjct: 358 DQWKQSTTTDFDISSCNRLVNAFIEAGLHEKANSFVNVLIQKNCEPTEA 406
>gi|297806979|ref|XP_002871373.1| hypothetical protein ARALYDRAFT_487758 [Arabidopsis lyrata subsp.
lyrata]
gi|297317210|gb|EFH47632.1| hypothetical protein ARALYDRAFT_487758 [Arabidopsis lyrata subsp.
lyrata]
Length = 410
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 243/413 (58%), Positives = 318/413 (76%), Gaps = 15/413 (3%)
Query: 1 MAARSFFLGLR-RASNTK------IKNRPNSDYECFFYSRFLSSGSSQNECLDEETSNSD 53
MA RS F LR R +N I+N +S +S+ ++ ++ L EE S+
Sbjct: 1 MATRSLFHSLRCRLTNNGVVGSNFIRNAESSS----GFSKSYNADAAIGGSLVEE---SE 53
Query: 54 GKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEW 113
KDDLKSRIFR+ LPKRSAT V++RWV EGNQ T++ELR I KELR+++R+KHALE++EW
Sbjct: 54 EKDDLKSRIFRLRLPKRSATTVLERWVGEGNQITINELREISKELRRTRRHKHALEVTEW 113
Query: 114 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 173
MV H+E +SD+DYA+RIDL++KVFGI + ERYFEGL + AKT+ETYT+LLH YAG+K T
Sbjct: 114 MVQHEELKVSDADYASRIDLISKVFGIDAAERYFEGLHIDAKTTETYTSLLHAYAGSKQT 173
Query: 174 EKAEELFERVKQSN-LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 232
E+AE LF+R+ +++ LSF A+ YNEMMTLYMSVGQVEKV V++ +K K V PDIFTYNL
Sbjct: 174 ERAEALFKRIIETDSLSFGAITYNEMMTLYMSVGQVEKVPEVIQVLKHKKVSPDIFTYNL 233
Query: 233 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 292
W+SSCAAT NID++++ L+EM D+ ++ WV+Y+NL +IYI +S + NAES++ VEAEK
Sbjct: 234 WLSSCAATFNIDELRRILEEMRHDASSNEGWVRYINLTSIYINSSRVTNAESTSPVEAEK 293
Query: 293 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 352
SI+QR+WITYDFL+IL+ GLGNK IDQIWKSL T QK++SR+YIC+LSSYLMLGHL+E
Sbjct: 294 SISQREWITYDFLMILHTGLGNKVMIDQIWKSLGNTNQKLSSRSYICVLSSYLMLGHLRE 353
Query: 353 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 405
EII QWK+S T++FD SAC R+L AF DVGL A+ FH+LL+ C+ N
Sbjct: 354 AEEIIHQWKESKTTEFDASACLRILNAFRDVGLEGVASGFHLLLVYNKCSLEN 406
>gi|18415979|ref|NP_568214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75165070|sp|Q94B59.1|PP372_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g09450, mitochondrial; Flags: Precursor
gi|14596093|gb|AAK68774.1| putative protein [Arabidopsis thaliana]
gi|27311913|gb|AAO00922.1| putative protein [Arabidopsis thaliana]
gi|332004012|gb|AED91395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 409
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 240/413 (58%), Positives = 317/413 (76%), Gaps = 16/413 (3%)
Query: 1 MAARSFFLGLR-RASNTK------IKNRPNSDYECFFYSRFLSSGSSQNECLDEETSNSD 53
MA RS F LR R +N I+N +S + S+ ++ ++ L EE S+
Sbjct: 1 MATRSLFHSLRCRLTNNGVLGSNFIRNAESSRF-----SKSYNADAAIGNSLVEE---SE 52
Query: 54 GKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEW 113
KDDLKSRIFR+ LPKRSAT V+++W+ EGNQ T++ELR I KELR+++RYKHALE++EW
Sbjct: 53 EKDDLKSRIFRLRLPKRSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALEVTEW 112
Query: 114 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 173
MV H+E +SD+DYA+RIDL++KVFGI + ERYFEGL + +KT+ETYT+LLH YA +K T
Sbjct: 113 MVQHEESKISDADYASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQT 172
Query: 174 EKAEELFERVKQSN-LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 232
E+AE LF+R+ +S+ L+F A+ YNEMMTLYMSVGQVEKV V+E +K+K V PDIFTYNL
Sbjct: 173 ERAEALFKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNL 232
Query: 233 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 292
W+SSCAAT NID+++K L+EM D+ ++ WV+Y++L +IYI +S + NAES+ VEAEK
Sbjct: 233 WLSSCAATFNIDELRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEK 292
Query: 293 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 352
SI+QR+WITYDFL+IL+ GLGNK IDQIWKSLR T Q ++SR+YIC+LSSYLMLGHL+E
Sbjct: 293 SISQREWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLRE 352
Query: 353 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 405
EII QWK+S T++FD SAC R+L AF DVGL A+ FH++L+ C+ N
Sbjct: 353 AEEIIHQWKESKTTEFDASACLRILNAFRDVGLEGIASGFHLILVHNKCSLEN 405
>gi|21592522|gb|AAM64472.1| unknown [Arabidopsis thaliana]
Length = 409
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 240/413 (58%), Positives = 317/413 (76%), Gaps = 16/413 (3%)
Query: 1 MAARSFFLGLR-RASNTK------IKNRPNSDYECFFYSRFLSSGSSQNECLDEETSNSD 53
MA RS F LR R +N I+N +S + S+ ++ ++ L EE S+
Sbjct: 1 MATRSLFHSLRCRLTNNGVLGSNFIRNAESSRF-----SKSYNADAAIGNSLVEE---SE 52
Query: 54 GKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEW 113
KDDLKSRIFR+ LPKRSAT V+++W+ EGNQ T++ELR I KELR+++RYKHALE++EW
Sbjct: 53 EKDDLKSRIFRLRLPKRSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALEVTEW 112
Query: 114 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 173
MV H+E +SD+DYA+RIDL++KVFGI + ERYFEGL + +KT+ETYT+LLH YA +K T
Sbjct: 113 MVQHEESKISDADYASRIDLISKVFGIDAAERYFEGLHIDSKTAETYTSLLHAYAASKQT 172
Query: 174 EKAEELFERVKQSN-LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 232
E+AE LF+R+ +S+ L+F A+ YNEMMTLYMSVGQVEKV V+E +K+K V PDIFTYNL
Sbjct: 173 ERAEALFKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNL 232
Query: 233 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 292
W+SSCAAT NID+++K L+EM D+ ++ WV+Y++L +IYI +S + NAES+ VEAEK
Sbjct: 233 WLSSCAATFNIDELRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEK 292
Query: 293 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 352
SI+QR+WITYDFL+IL+ GLGNK IDQIWKSLR T Q ++SR+YIC+LSSYLMLGHL+E
Sbjct: 293 SISQREWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLRE 352
Query: 353 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 405
EII QWK+S T++FD SAC R+L AF DVGL A+ FH++L+ C+ N
Sbjct: 353 AEEIIHQWKESKTTEFDASACLRILNAFRDVGLEGIASGFHLILVHNKCSLEN 405
>gi|388490914|gb|AFK33523.1| unknown [Lotus japonicus]
Length = 358
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 239/358 (66%), Positives = 286/358 (79%), Gaps = 8/358 (2%)
Query: 1 MAARSFFLGLRRASNTKIKNRPNSDYECFF-YSRFLSSGSSQNECLDEETSNSDGKDDLK 59
MA RS FL LRR S N + C +RF+SSG+ + ++ + DDL+
Sbjct: 1 MAYRSLFLSLRRNSGFISTNSHHHQSRCLLNRARFVSSGAVSTDFVESD-------DDLR 53
Query: 60 SRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKE 119
SRI R+ LPKRSATN++ +WV EGN TVSELR I KELR+SQRYKHALEISEWM+TH+E
Sbjct: 54 SRILRLRLPKRSATNILHKWVLEGNSVTVSELRDIAKELRRSQRYKHALEISEWMITHEE 113
Query: 120 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEEL 179
LSDSDYA RIDLMTKVFGI + ERYFE LP++AKTSETYTALLH YAGAK TEKAEEL
Sbjct: 114 HGLSDSDYAMRIDLMTKVFGIDAAERYFEALPVAAKTSETYTALLHSYAGAKMTEKAEEL 173
Query: 180 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 239
++R+K SNLSF+AL YNEMMTLYMSVGQVEKV VVEE+K++NV PDIFTYNLWISSCAA
Sbjct: 174 YQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAA 233
Query: 240 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 299
TLNID+V++ LDEMS + ++ W +Y+NL N+Y+TAS L N+ S++L E EK ITQ QW
Sbjct: 234 TLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVTASRLDNSSSNSLAETEKRITQSQW 293
Query: 300 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 357
ITYDFLIILYAGLG+KDK+DQIW SLRMTKQKM +RNY CI+S+YLMLGH+KEV ++
Sbjct: 294 ITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINRNYSCIISAYLMLGHVKEVVRLL 351
>gi|9955532|emb|CAC05471.1| putative protein [Arabidopsis thaliana]
Length = 402
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 236/413 (57%), Positives = 311/413 (75%), Gaps = 23/413 (5%)
Query: 1 MAARSFFLGLR-RASNTK------IKNRPNSDYECFFYSRFLSSGSSQNECLDEETSNSD 53
MA RS F LR R +N I+N +S + S+ ++ ++ L EE S+
Sbjct: 1 MATRSLFHSLRCRLTNNGVLGSNFIRNAESSRF-----SKSYNADAAIGNSLVEE---SE 52
Query: 54 GKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEW 113
KDDLKSRIFR+ LPKRSAT V+++W+ EGNQ T++ELR I KELR+++RYKHALE
Sbjct: 53 EKDDLKSRIFRLRLPKRSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALE---- 108
Query: 114 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 173
H+E +SD+DYA+RIDL++KVFGI + ERYFEGL + +KT+ETYT+LLH YA +K T
Sbjct: 109 ---HEESKISDADYASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQT 165
Query: 174 EKAEELFERVKQSN-LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 232
E+AE LF+R+ +S+ L+F A+ YNEMMTLYMSVGQVEKV V+E +K+K V PDIFTYNL
Sbjct: 166 ERAEALFKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNL 225
Query: 233 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 292
W+SSCAAT NID+++K L+EM D+ ++ WV+Y++L +IYI +S + NAES+ VEAEK
Sbjct: 226 WLSSCAATFNIDELRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEK 285
Query: 293 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 352
SI+QR+WITYDFL+IL+ GLGNK IDQIWKSLR T Q ++SR+YIC+LSSYLMLGHL+E
Sbjct: 286 SISQREWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLRE 345
Query: 353 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 405
EII QWK+S T++FD SAC R+L AF DVGL A+ FH++L+ C+ N
Sbjct: 346 AEEIIHQWKESKTTEFDASACLRILNAFRDVGLEGIASGFHLILVHNKCSLEN 398
>gi|242073288|ref|XP_002446580.1| hypothetical protein SORBIDRAFT_06g018360 [Sorghum bicolor]
gi|241937763|gb|EES10908.1| hypothetical protein SORBIDRAFT_06g018360 [Sorghum bicolor]
Length = 415
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 203/357 (56%), Positives = 269/357 (75%), Gaps = 2/357 (0%)
Query: 49 TSNSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHAL 108
T DG DDL+SRIFR+ L KRSAT + +W EG A +ELR I ++L + +RYKHAL
Sbjct: 55 TGEEDG-DDLRSRIFRLGLAKRSATAALDKWSGEGRAAPAAELRRIARDLSRVRRYKHAL 113
Query: 109 EISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYA 168
E+++WM TH E LS+SDY RIDL+TKVFG + E +FE LP AK+ E YTALLH Y
Sbjct: 114 EVADWMKTHHESDLSESDYGMRIDLITKVFGASAAEDFFEKLPPGAKSLEAYTALLHSYG 173
Query: 169 GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIF 228
+K T+KAE LFER+K +NLS +AL+YNEMMTLY+SVG+++KV ++ EE+KR+NV PD+F
Sbjct: 174 RSKMTDKAERLFERMKDANLSMDALVYNEMMTLYISVGELDKVEIIAEELKRQNVSPDLF 233
Query: 229 TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV 288
TYNL +S+ AA+++++ K LDEMS D + W Y NL ++Y+ AS LV + +S LV
Sbjct: 234 TYNLRVSAAAASMDLEGFKGILDEMSKDPNSKEGWTLYRNLASVYVDASQLVGSGNS-LV 292
Query: 289 EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLG 348
EAE I+QR+WITYDFL+IL+AGLGN+++I IWKS+ MT Q+MTSRNYIC++SSYLM G
Sbjct: 293 EAEAKISQREWITYDFLVILHAGLGNQERIKDIWKSMVMTSQRMTSRNYICVISSYLMCG 352
Query: 349 HLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 405
LK+ GEI+DQW++S +FDISACNRLL A GLT+ A+ F L+LQK+C T+
Sbjct: 353 QLKDAGEIVDQWQRSKAPEFDISACNRLLDALLSAGLTDTADRFRELMLQKSCILTS 409
>gi|125548508|gb|EAY94330.1| hypothetical protein OsI_16098 [Oryza sativa Indica Group]
Length = 430
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 201/376 (53%), Positives = 273/376 (72%), Gaps = 4/376 (1%)
Query: 33 RFLSSGSSQNECLDEETSNSD---GKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVS 89
R ++G C + +D +DDL+SR+FR+ L KRSAT ++RW EG A+ +
Sbjct: 50 RAAAAGDGDEGCAAAAATPADVGGDEDDLRSRVFRLRLAKRSATAALERWAGEGRAASAA 109
Query: 90 ELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEG 149
ELR I ++L ++ RYKHALE++EWM TH E LS++DY RIDL+T+VFG ++ E +FE
Sbjct: 110 ELRGIARDLSRAGRYKHALEVAEWMKTHHESDLSENDYGMRIDLITRVFGANAAEDFFEK 169
Query: 150 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 209
LP ++ E YTALLH YA +K T+KAE LF+R+K +NLS N L+YNEMMTLY+SVG+++
Sbjct: 170 LPACVQSLEAYTALLHSYARSKMTDKAERLFKRMKDANLSMNILVYNEMMTLYISVGELD 229
Query: 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
KV ++ EE+KR+ PD+FTYNL IS+ AA+++++ K LDEMS D ++ W Y NL
Sbjct: 230 KVPVIAEELKRQKFSPDLFTYNLRISASAASMDLEGFKGILDEMSKDPNSNEGWKLYQNL 289
Query: 270 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
IY+ A LV + +S LVEAE I+QR+WITYDFL+IL+ GLGN+D+I IWKS+ MT
Sbjct: 290 AVIYVDAGQLVGSGNS-LVEAEAKISQREWITYDFLVILHTGLGNRDRIKDIWKSMLMTS 348
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
Q+MTSRNYIC+LSSYLM G LK+ GE+IDQW++S +FDISACNRL AF + G T+ A
Sbjct: 349 QRMTSRNYICVLSSYLMCGQLKDAGEVIDQWQRSKAPEFDISACNRLFDAFLNAGFTDTA 408
Query: 390 NEFHMLLLQKNCAPTN 405
N F L+LQK+C T+
Sbjct: 409 NSFRELMLQKSCILTS 424
>gi|125590560|gb|EAZ30910.1| hypothetical protein OsJ_14991 [Oryza sativa Japonica Group]
Length = 471
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 199/372 (53%), Positives = 270/372 (72%), Gaps = 4/372 (1%)
Query: 33 RFLSSGSSQNECLDEETSNSD---GKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVS 89
R ++G C +D +DDL+SR+FR+ L KRSAT ++RW EG A+ +
Sbjct: 91 RAAAAGDGDEGCAAAAAKPADVGGDEDDLRSRVFRLRLAKRSATAALERWAGEGRAASAA 150
Query: 90 ELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEG 149
ELR I ++L ++ RYKHALE++EWM TH E LS++DY RIDL+T+VFG ++ E +FE
Sbjct: 151 ELRGIARDLSRAGRYKHALEVAEWMKTHHESDLSENDYGMRIDLITRVFGANAAEDFFEK 210
Query: 150 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 209
LP ++ E YTALLH YA +K T+KAE LF+R+K +NLS N L+YNEMMTLY+SVG+++
Sbjct: 211 LPACVQSLEAYTALLHSYARSKMTDKAERLFKRMKDANLSMNILVYNEMMTLYISVGELD 270
Query: 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
KV ++ EE+KR+ PD+FTYNL IS+ AA+++++ K LDEMS D ++ W Y NL
Sbjct: 271 KVPVIAEELKRQKFSPDLFTYNLRISASAASMDLEGFKGILDEMSKDPNSNEGWKLYQNL 330
Query: 270 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
IY+ A LV + +S LVEAE I++R+WITYDFL+IL+ GLGN+D+I IWKS+ MT
Sbjct: 331 AVIYVDAGQLVGSGNS-LVEAEAKISRREWITYDFLVILHTGLGNRDRIKDIWKSMLMTS 389
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
Q+MTSRNYIC+LSSYLM G LK+ GE+IDQW++S +FDISACNRL AF + G T+ A
Sbjct: 390 QRMTSRNYICVLSSYLMCGQLKDAGEVIDQWQRSKAPEFDISACNRLFDAFLNAGFTDTA 449
Query: 390 NEFHMLLLQKNC 401
N F L+LQK+C
Sbjct: 450 NSFRELMLQKSC 461
>gi|21740710|emb|CAD40831.1| OSJNBa0086B14.3 [Oryza sativa Japonica Group]
gi|116310079|emb|CAH67100.1| H0818E04.17 [Oryza sativa Indica Group]
Length = 430
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 200/376 (53%), Positives = 273/376 (72%), Gaps = 4/376 (1%)
Query: 33 RFLSSGSSQNECLDEETSNSD---GKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVS 89
R ++G C + +D +DDL+SR+FR+ L KRSAT ++RW EG A+ +
Sbjct: 50 RAAAAGDGDEGCAAAAATPADVGGDEDDLRSRVFRLRLAKRSATAALERWAGEGRAASAA 109
Query: 90 ELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEG 149
ELR I ++L ++ RYKHALE++EWM TH E LS++DY RIDL+T+VFG ++ E +FE
Sbjct: 110 ELRGIARDLSRAGRYKHALEVAEWMKTHHESDLSENDYGMRIDLITRVFGANAAEDFFEK 169
Query: 150 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 209
LP ++ E YTALLH YA +K T+KAE LF+R+K +NLS N L+YNEMMTLY+SVG+++
Sbjct: 170 LPACVQSLEAYTALLHSYARSKMTDKAERLFKRMKDANLSMNILVYNEMMTLYISVGELD 229
Query: 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
KV ++ EE+KR+ PD+FTYNL IS+ AA+++++ K LDEMS D ++ W Y NL
Sbjct: 230 KVPVIAEELKRQKFSPDLFTYNLRISASAASMDLEGFKGILDEMSKDPNSNEGWKLYQNL 289
Query: 270 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
IY+ A LV + +S LVEAE I++R+WITYDFL+IL+ GLGN+D+I IWKS+ MT
Sbjct: 290 AVIYVDAGQLVGSGNS-LVEAEAKISRREWITYDFLVILHTGLGNRDRIKDIWKSMLMTS 348
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
Q+MTSRNYIC+LSSYLM G LK+ GE+IDQW++S +FDISACNRL AF + G T+ A
Sbjct: 349 QRMTSRNYICVLSSYLMCGQLKDAGEVIDQWQRSKAPEFDISACNRLFDAFLNAGFTDTA 408
Query: 390 NEFHMLLLQKNCAPTN 405
N F L+LQK+C T+
Sbjct: 409 NSFRELMLQKSCILTS 424
>gi|357163843|ref|XP_003579864.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Brachypodium distachyon]
Length = 422
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 198/353 (56%), Positives = 264/353 (74%), Gaps = 1/353 (0%)
Query: 56 DDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMV 115
DDL+S IFR+ L KRSAT + RW EG A ELR + ++L +++RYKHALE++EWM
Sbjct: 68 DDLRSLIFRLRLAKRSATEALDRWAGEGRAAPAPELRRVARDLSRARRYKHALEVAEWMK 127
Query: 116 THKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEK 175
TH E LS++DY RIDL+TKVFG ++ E +FE LP AK+ E YTALLH YA +K T+K
Sbjct: 128 THHESDLSENDYGVRIDLITKVFGANAAEDFFEKLPSEAKSLEAYTALLHSYARSKMTDK 187
Query: 176 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
AE LFER+K ++LS + L+YNEMMTLY+SVG+++KV V EE+KR+NV PD+FTYNL IS
Sbjct: 188 AERLFERMKDADLSIDVLVYNEMMTLYISVGELDKVPAVAEELKRQNVSPDLFTYNLRIS 247
Query: 236 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 295
+ AA+++++ K LDEMS D ++ W Y NL IY+ AS LV++ +S LVEAE I+
Sbjct: 248 ASAASMDLEIFKGILDEMSKDPNSNEGWTLYRNLATIYVNASQLVSSGNS-LVEAEAKIS 306
Query: 296 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 355
QR+WITYDFLI+L+ GLGN +++ IWKS++MT Q+MTSRNYIC+LSSYLM G LK+ E
Sbjct: 307 QREWITYDFLILLHTGLGNLERVKDIWKSMQMTSQRMTSRNYICVLSSYLMCGQLKDAKE 366
Query: 356 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNASG 408
I+DQW++S +FDISACNRL A G T+ A+ F L+LQK+C T+ +G
Sbjct: 367 IVDQWQRSKAPEFDISACNRLFDALLGAGFTDTADSFRELMLQKSCILTSMAG 419
>gi|326504724|dbj|BAK06653.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326523789|dbj|BAJ93065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 186/344 (54%), Positives = 260/344 (75%), Gaps = 1/344 (0%)
Query: 58 LKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTH 117
L+S IFR+ L KRSAT +++W EG A ELR I ++L +++RYKHALE++EWM TH
Sbjct: 67 LRSHIFRLRLAKRSATEALEKWAGEGRAAPAPELRRIARDLSRARRYKHALEVAEWMKTH 126
Query: 118 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 177
E LS++DY RIDL+TKVFG ++ E +FE LP +AK+ E YTALLH YA +K +KAE
Sbjct: 127 HESDLSENDYGVRIDLITKVFGANAAEDFFEKLPPAAKSLEAYTALLHSYARSKMIDKAE 186
Query: 178 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 237
LF+R+K ++L + L+YNEMMTLY+SVG+++KV ++ EE+KR+NV PD+FTYNL IS+
Sbjct: 187 RLFQRMKDADLPIDVLVYNEMMTLYISVGELDKVPILAEELKRQNVSPDLFTYNLRISAS 246
Query: 238 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 297
A+++++ K LDEMS D ++ W+ Y NL +IY+ AS LV++ +S LVEAE I+QR
Sbjct: 247 VASMDLEAFKGILDEMSKDPNSNEGWMLYRNLASIYVDASQLVSSGNS-LVEAEAKISQR 305
Query: 298 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 357
+WITYD L+IL+AGLGN D++ IWKS++MT Q+MTSRNY+C+LS+YLM G LK+ E++
Sbjct: 306 EWITYDLLVILHAGLGNLDRVKDIWKSMQMTAQRMTSRNYVCVLSAYLMCGQLKDAAEVV 365
Query: 358 DQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 401
DQW++S +FD+SACNRL A G T+ A+ F L+LQK+C
Sbjct: 366 DQWQRSKVPEFDVSACNRLFDALLAAGFTDTADSFRELMLQKSC 409
>gi|326520694|dbj|BAJ92710.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 185/344 (53%), Positives = 259/344 (75%), Gaps = 1/344 (0%)
Query: 58 LKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTH 117
L+S IFR+ L KRSAT +++W EG A ELR I ++L +++RYKHALE++EWM TH
Sbjct: 67 LRSHIFRLRLAKRSATEALEKWAGEGRAAPAPELRRIARDLSRARRYKHALEVAEWMKTH 126
Query: 118 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 177
E LS++DY RIDL+TKVFG ++ E +FE LP +AK+ E YTALLH YA +K +KAE
Sbjct: 127 HESDLSENDYGVRIDLITKVFGANAAEDFFEKLPPAAKSLEAYTALLHSYARSKMIDKAE 186
Query: 178 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 237
LF+R+K ++L + L+YNEMMTLY+SVG+++KV ++ EE+KR+NV PD+FTYNL IS+
Sbjct: 187 RLFQRMKDADLPIDVLVYNEMMTLYISVGELDKVPILAEELKRQNVSPDLFTYNLRISAS 246
Query: 238 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 297
A+++++ K LDEMS D ++ W+ Y NL +IY+ AS LV++ +S LVEAE I+QR
Sbjct: 247 VASMDLEAFKGILDEMSKDPNSNEGWMLYRNLASIYVDASQLVSSGNS-LVEAEAKISQR 305
Query: 298 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 357
+WITYD L+IL+AGLGN D++ IWKS++MT Q+MTSRNY+C+LS+YLM G LK+ ++
Sbjct: 306 EWITYDLLVILHAGLGNLDRVKDIWKSMQMTAQRMTSRNYVCVLSAYLMCGQLKDAAGVV 365
Query: 358 DQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 401
DQW++S +FD+SACNRL A G T+ A+ F L+LQK+C
Sbjct: 366 DQWQRSKVPEFDVSACNRLFDALLAAGFTDTADSFRELMLQKSC 409
>gi|226528511|ref|NP_001143788.1| uncharacterized protein LOC100276555 [Zea mays]
gi|195627038|gb|ACG35349.1| hypothetical protein [Zea mays]
Length = 422
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/369 (51%), Positives = 261/369 (70%), Gaps = 11/369 (2%)
Query: 49 TSNSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHAL 108
T DG DDL+SRIFR+ L KRSAT +++W SEG A +ELR I ++L + +RYKHAL
Sbjct: 48 TGEHDG-DDLRSRIFRLGLAKRSATAALEKWSSEGRDAPAAELRRIARDLTRVRRYKHAL 106
Query: 109 EISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYA 168
E+++WM TH E LS++DY RIDL+TKVFG + E +FE LP AK+ E YTALLH Y
Sbjct: 107 EVADWMKTHHESDLSENDYGMRIDLITKVFGASAAEDFFEKLPAGAKSLEAYTALLHSYG 166
Query: 169 GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIF 228
+K T++AE LFER+K ++L +AL+YNEMMTLY+SVG++ KV V EE+KR+NV PD+F
Sbjct: 167 RSKMTDRAERLFERMKGASLPMDALVYNEMMTLYISVGELGKVEAVAEELKRQNVSPDLF 226
Query: 229 TYNLWISSCAATLNIDQVKKFLDEMSCD--SGGSDDWVKYVNLVNIYITASHLVNAESST 286
TYNL S+ AA+++++ + LDEMS D S W Y +L ++Y+ A L+ + +S
Sbjct: 227 TYNLRASAAAASMDLEGFRAVLDEMSRDLKSSTEGGWALYRDLASVYVDAGQLLGSVNSP 286
Query: 287 LVEA-EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT-------KQKMTSRNYI 338
VEA E I+QR+WITYDFL+IL+AGLG ++I IW+S+ T +Q+MTSRNY+
Sbjct: 287 PVEAGEARISQREWITYDFLVILHAGLGRPERIRDIWRSMVATSQSQSQSQQRMTSRNYV 346
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
C++SSYL G L++ GE++DQW++S +FD+SACNRLL A GL + A F L+LQ
Sbjct: 347 CVVSSYLACGRLEDAGEVVDQWQRSKAPEFDVSACNRLLDALLRAGLADAAGRFRELMLQ 406
Query: 399 KNCAPTNAS 407
K C T++S
Sbjct: 407 KRCILTSSS 415
>gi|414586983|tpg|DAA37554.1| TPA: hypothetical protein ZEAMMB73_139718 [Zea mays]
Length = 423
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 258/363 (71%), Gaps = 11/363 (3%)
Query: 49 TSNSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHAL 108
T DG DDL+SRIFR+ L KRSAT +++W SEG A +ELR I ++L + +RYKHAL
Sbjct: 48 TGEHDG-DDLRSRIFRLGLAKRSATAALEKWSSEGRDAPTAELRRIARDLTRVRRYKHAL 106
Query: 109 EISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYA 168
E+++WM TH E LS++DY RIDL+TKVFG + E +FE LP AK+ E YTALLH Y
Sbjct: 107 EVADWMKTHHESDLSENDYGMRIDLITKVFGASAAEDFFEKLPPGAKSLEAYTALLHSYG 166
Query: 169 GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIF 228
+K T++AE LFER+K ++L +AL+YNEMMTLY+SVG++ KV V EE+KR+NV PD+F
Sbjct: 167 RSKMTDRAERLFERMKDASLPMDALVYNEMMTLYISVGELGKVEAVAEELKRQNVSPDLF 226
Query: 229 TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD--WVKYVNLVNIYITASHLVNAESST 286
TYNL S+ AA+++++ + LDEMS D S + W Y +L ++Y+ A L+ + +S
Sbjct: 227 TYNLRASAAAASMDLEGFRAVLDEMSRDPKSSTEGGWALYRDLASVYVDAGQLLGSVNSP 286
Query: 287 LVEA-EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT-------KQKMTSRNYI 338
VEA E I+QR+WITYDFL+IL+AGLG ++I IW+S+ T +Q+MTSRNY+
Sbjct: 287 PVEAGEARISQREWITYDFLVILHAGLGRPERIRDIWRSMVATSQSQSQQQQRMTSRNYV 346
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
C++SSYL G L++ GE++DQW++S +FD+SACNRLL A GL + A F L+LQ
Sbjct: 347 CVVSSYLACGRLEDAGEVVDQWQRSKAPEFDVSACNRLLDALLRAGLADAAGRFRELMLQ 406
Query: 399 KNC 401
K C
Sbjct: 407 KRC 409
>gi|296090465|emb|CBI40661.3| unnamed protein product [Vitis vinifera]
Length = 287
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 174/249 (69%), Positives = 207/249 (83%), Gaps = 1/249 (0%)
Query: 30 FYSRFLSSGSSQNECLDEETSNSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVS 89
F R LSS + ++E L EE+ NS DDLKSRIF++ LPKRS TNV+QRW+ EGNQ +S
Sbjct: 26 FAFRLLSSRTLRSEVL-EESPNSPENDDLKSRIFKLRLPKRSVTNVLQRWLGEGNQVHIS 84
Query: 90 ELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEG 149
ELR+I KELR++QRYKHALEISEWMV+H EF LSDSD A RIDLMT+VFGI + ERYFEG
Sbjct: 85 ELRNISKELRRAQRYKHALEISEWMVSHDEFELSDSDNAVRIDLMTRVFGIDAAERYFEG 144
Query: 150 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 209
LP +AKTSETYTALLH YAGAK EKAEEL+ER+K+SN+ N L+YNEMMTLYMSVGQVE
Sbjct: 145 LPSAAKTSETYTALLHSYAGAKLAEKAEELYERIKESNVPLNILLYNEMMTLYMSVGQVE 204
Query: 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
KV+LVVEE+KR+ VVPD+FTYNLW+SSCAATL+ID V++ L EMS +S +D WV+Y NL
Sbjct: 205 KVSLVVEELKRQKVVPDLFTYNLWVSSCAATLDIDGVRRILKEMSNNSSANDGWVRYRNL 264
Query: 270 VNIYITASH 278
NIYI A +
Sbjct: 265 ANIYIMADY 273
>gi|115458674|ref|NP_001052937.1| Os04g0450200 [Oryza sativa Japonica Group]
gi|113564508|dbj|BAF14851.1| Os04g0450200, partial [Oryza sativa Japonica Group]
Length = 292
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 160/284 (56%), Positives = 215/284 (75%), Gaps = 1/284 (0%)
Query: 122 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFE 181
LS++DY RIDL+T+VFG ++ E +FE LP ++ E YTALLH YA +K T+KAE LF+
Sbjct: 4 LSENDYGMRIDLITRVFGANAAEDFFEKLPACVQSLEAYTALLHSYARSKMTDKAERLFK 63
Query: 182 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL 241
R+K +NLS N L+YNEMMTLY+SVG+++KV ++ EE+KR+ PD+FTYNL IS+ AA++
Sbjct: 64 RMKDANLSMNILVYNEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYNLRISASAASM 123
Query: 242 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWIT 301
+++ K LDEMS D ++ W Y NL IY+ A LV + +S LVEAE I++R+WIT
Sbjct: 124 DLEGFKGILDEMSKDPNSNEGWKLYQNLAVIYVDAGQLVGSGNS-LVEAEAKISRREWIT 182
Query: 302 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 361
YDFL+IL+ GLGN+D+I IWKS+ MT Q+MTSRNYIC+LSSYLM G LK+ GE+IDQW+
Sbjct: 183 YDFLVILHTGLGNRDRIKDIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKDAGEVIDQWQ 242
Query: 362 QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 405
+S +FDISACNRL AF + G T+ AN F L+LQK+C T+
Sbjct: 243 RSKAPEFDISACNRLFDAFLNAGFTDTANSFRELMLQKSCILTS 286
>gi|356536769|ref|XP_003536907.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Glycine max]
Length = 516
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 127/349 (36%), Positives = 206/349 (59%), Gaps = 5/349 (1%)
Query: 56 DDLKSRIFRISLPKRSATNVIQRWVSEGNQATVS-ELRHILKELRKSQRYKHALEISEWM 114
D L R+ + PKRSA I +W EG++ +L I++ELRK +RYKHALE+ EWM
Sbjct: 44 DTLGRRLLSLVYPKRSAVVAINKWKEEGHEPPRKYQLNRIVRELRKDKRYKHALEVCEWM 103
Query: 115 VTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE 174
K+ L DYA +DL+TKV G++S E++FE LP + +T +ALLH Y +
Sbjct: 104 TLQKDMKLVQGDYAVHLDLITKVRGLNSAEKFFEDLPDRMRGKQTCSALLHAYVQNNLVD 163
Query: 175 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 234
KAE L ++ + +L N L YN M++LY+S G++EKV +++E+K N PDI T+NLW+
Sbjct: 164 KAEALMLKMSECDLLINPLPYNHMISLYISNGKLEKVPKIIQELKM-NTSPDIVTFNLWL 222
Query: 235 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 294
++CA+ +++ ++ L E+ + DWV Y L N+YI + L A +T+ E E
Sbjct: 223 AACASQNDVETAERVLLELK-KAKIDPDWVTYSTLTNLYIKNASLEKA-GATVKEMENRT 280
Query: 295 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 354
+++ + Y L+ L+ +GNKD +++IW+ ++ + +KM YIC++SS L LG
Sbjct: 281 SRKTRVAYSSLLSLHTNMGNKDDVNRIWEKMKASFRKMNDNEYICMISSLLKLGDFAGAE 340
Query: 355 EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
++ +W +S + D+ N LLG++ + E A +F ++QK P
Sbjct: 341 DLYREW-ESVSGTNDVRVSNILLGSYINQDQMEMAEDFCNQIVQKGVIP 388
>gi|359490027|ref|XP_002279399.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 135/355 (38%), Positives = 202/355 (56%), Gaps = 4/355 (1%)
Query: 50 SNSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALE 109
S S G+D L R+ + KRSA IQRW EG+ EL I++ELRK +RYKHALE
Sbjct: 163 STSSGRDTLGRRLLSLVYAKRSAVIAIQRWREEGHTVRKYELNRIVRELRKLKRYKHALE 222
Query: 110 ISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAG 169
I EWM + L DYA +DL+ K+ G+ S E++FE L K T TALLH Y
Sbjct: 223 ICEWMTKQHDIKLLAGDYAVHLDLIAKIRGLASAEKFFEDLSDKMKGQPTCTALLHTYVQ 282
Query: 170 AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFT 229
K +EKAE L E++ + L YN M++LY+S GQ+EKV +++E+K KN PD+ T
Sbjct: 283 NKVSEKAEALMEKMSECGFLKCPLPYNHMISLYISDGQLEKVPGMIQELK-KNTSPDVVT 341
Query: 230 YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVE 289
YNLW++ CA+ +++ +K L E+ + DWV Y +L N+YI L++ ++TL E
Sbjct: 342 YNLWLTVCASQNDVETAEKVLLEIK-KAKIDPDWVTYSSLTNLYIKKG-LLDKAATTLNE 399
Query: 290 AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGH 349
EK +++ I Y LI L+ + +KD + +IWK L+ KM Y C++SS + LG
Sbjct: 400 MEKRTSRKGRIAYSSLISLHTNMQDKDGVHRIWKKLKSIFHKMNDAEYTCMISSLVKLGE 459
Query: 350 LKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 404
+E + +W S + D N LL A+ + E A +F+ ++++ P+
Sbjct: 460 FEEAENLYSEW-TSVSPTGDSRVPNILLAAYINKNEMEMAEKFYNQMVERGITPS 513
>gi|297737393|emb|CBI26594.3| unnamed protein product [Vitis vinifera]
Length = 529
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 135/355 (38%), Positives = 202/355 (56%), Gaps = 4/355 (1%)
Query: 50 SNSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALE 109
S S G+D L R+ + KRSA IQRW EG+ EL I++ELRK +RYKHALE
Sbjct: 50 STSSGRDTLGRRLLSLVYAKRSAVIAIQRWREEGHTVRKYELNRIVRELRKLKRYKHALE 109
Query: 110 ISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAG 169
I EWM + L DYA +DL+ K+ G+ S E++FE L K T TALLH Y
Sbjct: 110 ICEWMTKQHDIKLLAGDYAVHLDLIAKIRGLASAEKFFEDLSDKMKGQPTCTALLHTYVQ 169
Query: 170 AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFT 229
K +EKAE L E++ + L YN M++LY+S GQ+EKV +++E+K KN PD+ T
Sbjct: 170 NKVSEKAEALMEKMSECGFLKCPLPYNHMISLYISDGQLEKVPGMIQELK-KNTSPDVVT 228
Query: 230 YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVE 289
YNLW++ CA+ +++ +K L E+ + DWV Y +L N+YI L++ ++TL E
Sbjct: 229 YNLWLTVCASQNDVETAEKVLLEIK-KAKIDPDWVTYSSLTNLYIKKG-LLDKAATTLNE 286
Query: 290 AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGH 349
EK +++ I Y LI L+ + +KD + +IWK L+ KM Y C++SS + LG
Sbjct: 287 MEKRTSRKGRIAYSSLISLHTNMQDKDGVHRIWKKLKSIFHKMNDAEYTCMISSLVKLGE 346
Query: 350 LKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 404
+E + +W S + D N LL A+ + E A +F+ ++++ P+
Sbjct: 347 FEEAENLYSEW-TSVSPTGDSRVPNILLAAYINKNEMEMAEKFYNQMVERGITPS 400
>gi|147804811|emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]
Length = 1111
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 135/355 (38%), Positives = 202/355 (56%), Gaps = 4/355 (1%)
Query: 50 SNSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALE 109
S S G+D L R+ + KRSA IQRW EG+ EL I++ELRK +RYKHALE
Sbjct: 50 STSSGRDTLGRRLLSLVYAKRSAVIAIQRWREEGHTVRKYELNRIVRELRKLKRYKHALE 109
Query: 110 ISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAG 169
I EWM + L DYA +DL+ K+ G+ S E++FE L K T TALLH Y
Sbjct: 110 ICEWMTKQHDIKLLAGDYAVHLDLIAKIRGLASAEKFFEDLSDKMKGQPTCTALLHTYVQ 169
Query: 170 AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFT 229
K +EKAE L E++ + L YN M++LY+S GQ+EKV +++E+K KN PD+ T
Sbjct: 170 NKVSEKAEALMEKMSECGFLKCPLPYNHMISLYISDGQLEKVPGMIQELK-KNTSPDVVT 228
Query: 230 YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVE 289
YNLW++ CA+ +++ +K L E+ + DWV Y +L N+YI L++ ++TL E
Sbjct: 229 YNLWLTVCASQNDVETAEKVLLEIK-KAKIDPDWVTYSSLTNLYIKKG-LLDKAATTLNE 286
Query: 290 AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGH 349
EK +++ I Y LI L+ + +KD + +IWK L+ KM Y C++SS + LG
Sbjct: 287 MEKRTSRKGRIAYSSLISLHTNMQDKDGVHRIWKKLKSIFHKMNDAEYTCMISSLVKLGE 346
Query: 350 LKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 404
+E + +W S + D N LL A+ + E A +F+ ++++ P+
Sbjct: 347 FEEAENLYSEW-TSVSPTGDSRVPNILLAAYINKNEMEMAEKFYNQMVERGITPS 400
>gi|302142021|emb|CBI19224.3| unnamed protein product [Vitis vinifera]
Length = 560
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 129/384 (33%), Positives = 211/384 (54%), Gaps = 9/384 (2%)
Query: 26 YECFFYS--RFLSSG----SSQNECLDEETSNSDGKDDLKSRIFRISLPKRSATNVIQRW 79
+ C F++ R+ S SS+ +DE +DDL SR+ ++ P+RSAT V+Q W
Sbjct: 3 FRCLFFTLRRYAYSSRRSISSKTTPMDEAACTCK-RDDLTSRMLKLVFPRRSATAVLQNW 61
Query: 80 VSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFG 139
+ +G++ T S+LR++ ++L KS+R+KHALEI WM F +S +D+A R++L+ K+
Sbjct: 62 IDQGHKVTASDLRNVSRQLLKSKRHKHALEILAWMEAQNRFQMSAADHAIRLELIIKIQS 121
Query: 140 IHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMM 199
+ E YFE LP S+ LLH Y + EKAE L ++ L+ + +NEMM
Sbjct: 122 LAEAEEYFEHLPNSSSRKAACLPLLHAYVKERAIEKAEALMLKLNDLGLTVSPHPFNEMM 181
Query: 200 TLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG 259
LYM+ Q E+V V+ ++K+ + ++ +YNLW+S+C+ + + +M D
Sbjct: 182 KLYMATSQFERVPTVILQMKQNKIPLNVLSYNLWMSACSEVSGLASAEMVYKDMVDDKNV 241
Query: 260 SDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID 319
W L NIY+ S L+ + L AEK ++ + Y FLI +YA L NK+++
Sbjct: 242 EVGWSTLSTLANIYLK-SGLIKKANLALKNAEKKLSAHNRLGYFFLITMYASLSNKEEVL 300
Query: 320 QIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGA 379
++W++ + ++TS NY+CIL + LG + E I +W +S +DI N LLGA
Sbjct: 301 RLWEASKKVGGRITSTNYMCILLCLVKLGDIAEAERIFREW-ESKCWKYDIRVSNVLLGA 359
Query: 380 FSDVGLTEKANEFHMLLLQKNCAP 403
+ G +KA H+ L++ P
Sbjct: 360 YMRTGSMDKAESLHLHTLERGGCP 383
>gi|225459164|ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Vitis vinifera]
Length = 475
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 122/357 (34%), Positives = 201/357 (56%), Gaps = 2/357 (0%)
Query: 47 EETSNSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKH 106
+E + + +DDL SR+ ++ P+RSAT V+Q W+ +G++ T S+LR++ ++L KS+R+KH
Sbjct: 2 DEAACTCKRDDLTSRMLKLVFPRRSATAVLQNWIDQGHKVTASDLRNVSRQLLKSKRHKH 61
Query: 107 ALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHL 166
ALEI WM F +S +D+A R++L+ K+ + E YFE LP S+ LLH
Sbjct: 62 ALEILAWMEAQNRFQMSAADHAIRLELIIKIQSLAEAEEYFEHLPNSSSRKAACLPLLHA 121
Query: 167 YAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPD 226
Y + EKAE L ++ L+ + +NEMM LYM+ Q E+V V+ ++K+ + +
Sbjct: 122 YVKERAIEKAEALMLKLNDLGLTVSPHPFNEMMKLYMATSQFERVPTVILQMKQNKIPLN 181
Query: 227 IFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESST 286
+ +YNLW+S+C+ + + +M D W L NIY+ S L+ +
Sbjct: 182 VLSYNLWMSACSEVSGLASAEMVYKDMVDDKNVEVGWSTLSTLANIYLK-SGLIKKANLA 240
Query: 287 LVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLM 346
L AEK ++ + Y FLI +YA L NK+++ ++W++ + ++TS NY+CIL +
Sbjct: 241 LKNAEKKLSAHNRLGYFFLITMYASLSNKEEVLRLWEASKKVGGRITSTNYMCILLCLVK 300
Query: 347 LGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
LG + E I +W +S +DI N LLGA+ G +KA H+ L++ P
Sbjct: 301 LGDIAEAERIFREW-ESKCWKYDIRVSNVLLGAYMRTGSMDKAESLHLHTLERGGCP 356
>gi|148909871|gb|ABR18022.1| unknown [Picea sitchensis]
Length = 561
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 147/392 (37%), Positives = 213/392 (54%), Gaps = 13/392 (3%)
Query: 21 RPNSDYECFFY--SRFLSSG---SSQNECLDEETSNSDGKDDLKSRIFRISLPKRSATNV 75
R S + F Y SR G + E + + ++ D+L RI R+ PKRSA
Sbjct: 54 RDISSHGIFLYEDSRVCKMGIFRTVSTEAVATQKTSESLPDNLYRRISRLGDPKRSAVEE 113
Query: 76 IQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMT 135
++RW++EG + LR I++ELRK R+KHALE+ EWM K+F S D A + L+
Sbjct: 114 LERWITEGREVKKWVLREIVRELRKYYRHKHALEVFEWM--SKKFPCSVGDRAMHLGLIA 171
Query: 136 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 195
KV GI S E+Y+ L K TY ALL+ Y K EK+E + E +K A Y
Sbjct: 172 KVHGIASAEKYYVDLHHYEKNHLTYFALLNCYVQEKNIEKSEAIMEELKDLGFIKTAFPY 231
Query: 196 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 255
EMMTLYM+ Q EKV LV++E+K+K + DI YN+W+ S AA ++DQV + +E+
Sbjct: 232 TEMMTLYMNTEQFEKVPLVIQEMKKKGISLDIHCYNIWMRSYAALSDMDQVAEVFNEIER 291
Query: 256 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI----TQRQWITYDFLIILYAG 311
D + DW Y L NIYI A L A S L E E + T++ + Y+ LI L+
Sbjct: 292 DDNINTDWSIYSTLANIYINAKVLDKA-GSALKEMENKMKEIETKKDQLAYNHLISLHGR 350
Query: 312 LGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDIS 371
LGNKD++ +IW+S + KMT+R+Y+C+LSS + +G ++ I +W+ T D D
Sbjct: 351 LGNKDEVYRIWQSFELAFPKMTNRSYVCLLSSLVGMGDIEGAEVFIKKWESMKTFD-DSR 409
Query: 372 ACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
LL A+ + G +KA ++ K P
Sbjct: 410 IYYALLNAYIEKGWLQKAELLLERVVDKGGKP 441
>gi|326505170|dbj|BAK02972.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 510
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 131/376 (34%), Positives = 205/376 (54%), Gaps = 7/376 (1%)
Query: 31 YSRFLSSGSSQNECLDEETSNS-DGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVS 89
Y+R LS+ + S S G D L R+ ++ PKRSA V++RW EG
Sbjct: 12 YARLLSASAPAASTGGAGGSISVGGGDTLGKRLLKLIYPKRSAVVVLRRWAEEGRAVHKY 71
Query: 90 ELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEG 149
+L +++ELRK +R+KHALEI EWM T E L D+A +DL+ KV G+ S E++FE
Sbjct: 72 QLNRVVRELRKYRRFKHALEICEWMRTQPEIRLLPGDHAVHLDLVAKVRGLASAEKFFED 131
Query: 150 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 209
+P AK T +LLH Y +KAE + + + + AL +N MM+LYMSVG++E
Sbjct: 132 VPERAKGPSTCNSLLHAYVQHGARDKAEAMLKEMADAGYLTCALPFNHMMSLYMSVGELE 191
Query: 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
KV +++E+ R+ +PD+ TYN+W++ C+ ++ +K D M D DW+ + L
Sbjct: 192 KVPEMIKEL-RRYTIPDLVTYNIWLTYCSRKNSVKSAEKVFDLMK-DDRVVPDWMTFSLL 249
Query: 270 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
+IYI A V + LVE EK ++++ Y L+ +YA L ++ +D++W +R T
Sbjct: 250 ASIYINAGLHVKGRDA-LVEMEKRASRKERAAYSSLLTMYASLSDRGNLDRVWSKMRQTF 308
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWK-QSATSDFDISACNRLLGAFSDVGLTEK 388
+K + Y C+L+S G + + +W+ QS T D I N +L + G EK
Sbjct: 309 RKFSDAEYKCMLTSLTRFGDIAAAEFVYGEWESQSGTKDSRIP--NTILSFYIKNGEMEK 366
Query: 389 ANEFHMLLLQKNCAPT 404
A F ++QK P+
Sbjct: 367 AESFLQYIVQKGVKPS 382
>gi|108862755|gb|ABA99305.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215704853|dbj|BAG94881.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215712260|dbj|BAG94387.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 514
Score = 231 bits (588), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 125/352 (35%), Positives = 198/352 (56%), Gaps = 4/352 (1%)
Query: 56 DDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMV 115
D L R+ ++ PKRSA V++RW EG +L +++ELRK +R+KHALEI EWM
Sbjct: 43 DTLGRRLLKLIYPKRSAAVVLRRWAEEGRTVQKYQLNRVVRELRKYRRFKHALEICEWMR 102
Query: 116 THKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEK 175
T E L D+A +DL+ KV G+ S E++FE +P AK T ALLH Y +K
Sbjct: 103 TQPEMRLLPGDHAVHLDLVAKVRGLPSAEKFFEDMPERAKGPSTCNALLHAYVQHGRRDK 162
Query: 176 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
AE + E + ++ AL +N MM+LYMS G++EKV +++E+ R+ +PD+ TYN+W++
Sbjct: 163 AEAMLEEMAKAGYLTCALPFNHMMSLYMSSGELEKVPEMIKEL-RRYTIPDLVTYNIWLT 221
Query: 236 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 295
C+ ++ +K D M D DW+ + L +IYI A V + LVE EK +
Sbjct: 222 YCSKKNSVKAAEKVYDLMK-DERVVPDWMTFSLLGSIYINAGLHVKGRDA-LVEMEKRAS 279
Query: 296 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 355
+++ Y L+ LYA L ++ +D++W+ +R T +K + Y C+L+S G + E
Sbjct: 280 RKERAAYSSLLTLYASLSDRGNLDRVWRKMRETFRKFSDTEYKCMLTSLTRFGDIAEAES 339
Query: 356 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
+W +SA+ D N +L + G+ EKA F ++QK P+ ++
Sbjct: 340 FYSEW-ESASGTRDSRIPNTILAFYIKNGMMEKAEGFLDHIVQKGVKPSYST 390
>gi|255545872|ref|XP_002513996.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547082|gb|EEF48579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 496
Score = 231 bits (588), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 134/373 (35%), Positives = 203/373 (54%), Gaps = 5/373 (1%)
Query: 34 FLSSGSSQ--NECLDEETSNSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSEL 91
F SG Q N L N +LK++I ++ P + T+++Q+W+ G++ TVS+L
Sbjct: 5 FDRSGDIQFKNRSLSTSPKNGYTNSNLKNQIMKLKSPGLNITSILQKWIDNGHKVTVSQL 64
Query: 92 RHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLP 151
R+I L KS+RYKHALEI WM T K F +S SDYA R++L+ KV GI E YF +P
Sbjct: 65 RYINGLLVKSKRYKHALEIFTWMETQKNFRMSVSDYALRLELIIKVNGIEEAEEYFNFIP 124
Query: 152 LSAKTSETYT-ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 210
+ T + + ALLH Y K KAE L ++ L N +NEMM LYM+ Q EK
Sbjct: 125 HDSVTRKAASFALLHGYVKVKDVVKAEALMMKLYNLGLIVNCYPFNEMMKLYMATSQYEK 184
Query: 211 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 270
VALV++++KR + ++ +YNLW+SS + +V+ EM D W L
Sbjct: 185 VALVIDQMKRNKIALNLLSYNLWMSSYGEVSKVVKVELVYKEMVNDDNVEVGWSTLATLA 244
Query: 271 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 330
NIY T + +V+ L AEK ++ + Y FL+ Y+ L NK+ + ++W++ +
Sbjct: 245 NIY-TKAGIVDKALLALKNAEKILSTSHLLGYFFLMTQYSSLKNKEGVQRLWEACKGVNG 303
Query: 331 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 390
++T NY+C+LS + +G L E ++ W+ + +DI N LLGA+ GL KA
Sbjct: 304 RITCANYMCVLSCLVKVGDLLEAEKVFRDWELNCRK-YDIRVSNVLLGAYVRKGLMNKAE 362
Query: 391 EFHMLLLQKNCAP 403
H+ L + P
Sbjct: 363 SLHLHTLDRGGCP 375
>gi|224085447|ref|XP_002307578.1| predicted protein [Populus trichocarpa]
gi|222857027|gb|EEE94574.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 230 bits (587), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 125/349 (35%), Positives = 200/349 (57%), Gaps = 6/349 (1%)
Query: 56 DDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMV 115
D L R+F + KRSA I++W EG+ EL I++ELRK +RYKHALE+ EWM
Sbjct: 40 DTLGRRLFSLVYGKRSAVITIRKWKEEGHNVRKYELNRIVRELRKLKRYKHALEVCEWMT 99
Query: 116 THKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEK 175
+ L DYA +DL+ K+ G++S E++FE +P + + +ALLH+Y K K
Sbjct: 100 KQSDIKLVPGDYAVHLDLIAKIRGLNSAEKFFEDIPDKMRDYQACSALLHVYVQNKSISK 159
Query: 176 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
AE L E++ + NAL YN M+++Y++ GQ+EKVA +++E+K+K PD+ TYN+W++
Sbjct: 160 AEALMEKMSECGFLKNALPYNHMLSVYVANGQLEKVAEIIQELKKK-TSPDVVTYNMWLT 218
Query: 236 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 295
+CA+ +++ +K E+ S DWV Y L N+YI L A + TL E EK +
Sbjct: 219 ACASQNDVETAEKVFMELK-KSKLDPDWVTYSTLTNLYIKKECLEKA-AYTLKEVEKRAS 276
Query: 296 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 355
++ +TY L+ L+A + +KD + + W ++ KM Y C++SS + LG
Sbjct: 277 KKNRVTYSSLLSLHANMKDKDGLHRTWNKMKSVFNKMNDAEYNCMISSLVKLGEFGGAEN 336
Query: 356 IIDQWKQ-SATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
+ ++W+ SAT D +S N +L ++ + E A F ++QK P
Sbjct: 337 LYNEWESVSATRDSRVS--NIVLASYINRNQMEDAENFCQRMVQKGITP 383
>gi|357440753|ref|XP_003590654.1| WD repeat-containing protein [Medicago truncatula]
gi|355479702|gb|AES60905.1| WD repeat-containing protein [Medicago truncatula]
Length = 562
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 126/354 (35%), Positives = 203/354 (57%), Gaps = 7/354 (1%)
Query: 50 SNSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVS-ELRHILKELRKSQRYKHAL 108
S+S G D L R+ + PKRSA I +W EG+ +L +++ELRK++RYKHAL
Sbjct: 30 SSSSGGDTLGRRLLSLVYPKRSAVIAINKWKEEGHTLPRKYQLNRMIRELRKNKRYKHAL 89
Query: 109 EISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYA 168
E+ EWM + L + DYA ++DL+TKV G++S E++FE LP + T TALLH Y
Sbjct: 90 EVCEWMKLQNDIKLVEGDYAVQLDLITKVRGLNSAEKFFEDLPDKMRGQPTCTALLHAYV 149
Query: 169 GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIF 228
T KAE L ++ + + + YN MM+LY+S G++EKV + EE+K N PD+
Sbjct: 150 QNNLTNKAEALMSKMSECGFLRSPVPYNRMMSLYISNGKLEKVPKLFEELK-VNTSPDVV 208
Query: 229 TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI---TASHLVNAESS 285
T+NL +++CA+ +++ ++ L ++ + DWV Y L N+YI + + +S
Sbjct: 209 TFNLLLTACASENDVETAERVLLQLK-KAKVDPDWVTYSTLTNLYIRNASVDDCLEKAAS 267
Query: 286 TLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYL 345
TL E EK ++ + Y L+ L+A +GN D++++IW ++ KM+ Y+C++SS +
Sbjct: 268 TLKEMEKRTSRETRVAYSSLLSLHANMGNVDEVNRIWGKMKACFCKMSDDEYVCMISSLV 327
Query: 346 MLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 399
LG V + +W +S + D+ N LL ++ D G E A F L++K
Sbjct: 328 KLGDFAGVENLYKEW-ESVSGTNDVRVSNLLLTSYVDQGQMEMAEIFCNQLVEK 380
>gi|255559466|ref|XP_002520753.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540138|gb|EEF41715.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 551
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 127/350 (36%), Positives = 196/350 (56%), Gaps = 4/350 (1%)
Query: 54 GKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEW 113
G D L RIF + KRSA I++W +EG++ +L I++ELRK +RYKHALE+ EW
Sbjct: 34 GGDTLGRRIFSLVYSKRSAVIAIRKWKTEGHKVQKYQLNRIVRELRKMKRYKHALEVCEW 93
Query: 114 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 173
M +E L DYA +DL+ KV G+ S E++FE LP + +T TALLH Y K
Sbjct: 94 MTQERELKLLPGDYAVHLDLVAKVRGLTSAEKFFEDLPDEMRGWQTCTALLHTYVKCKDV 153
Query: 174 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 233
KAE L E+++ + N L YN M++LY++ G+ +K +VEE+K K+ PD+ T+NLW
Sbjct: 154 VKAEALMEKMRDCSFVKNPLPYNHMISLYIADGEFDKAKRIVEELK-KSTTPDVVTFNLW 212
Query: 234 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 293
+S C A+LN + K + DW+ Y L N+Y+ L +A STL E EK
Sbjct: 213 LSMC-ASLNDVESAKKVLLELKKLKIEADWITYSTLTNLYLKNKLLEDA-VSTLKEMEKR 270
Query: 294 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 353
+++ + Y L+ LY +G+KD + +IW ++ KM Y C+LSS + L +++
Sbjct: 271 ASRKNRLAYSSLLSLYTNMGDKDAVHRIWNKMKSLFCKMNDAEYTCMLSSLIKLEEIEKA 330
Query: 354 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
+ +W +S + D N LL A+ + E + F+ +++K P
Sbjct: 331 ENLYTEW-ESVSGTGDPQVANILLAAYINRNQIEDSENFYRRMVEKGVCP 379
>gi|297814019|ref|XP_002874893.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297320730|gb|EFH51152.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 525
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 121/351 (34%), Positives = 206/351 (58%), Gaps = 4/351 (1%)
Query: 54 GKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEW 113
G+D L R+ + KRSA I++W EG+ EL I++ELRK +RYKHALEI EW
Sbjct: 52 GRDTLGGRLLSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEW 111
Query: 114 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 173
MV ++ L DYA +DL++K+ G++S E++FE LP + T+LLH Y K +
Sbjct: 112 MVLQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDLPDQMRGHAACTSLLHSYVQNKLS 171
Query: 174 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 233
+KAE LFE++ + + L YN M+++++S GQ EKV+++++E+K K PDI TYNLW
Sbjct: 172 DKAEALFEKMGECGFLKSCLPYNHMLSMFISKGQFEKVSVLIKELKMKT-SPDIVTYNLW 230
Query: 234 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 293
+++ A+ +++ +K + +S + DWV Y L N+Y +L A+ + L E EK
Sbjct: 231 LTAFASGNDVEGAEKVYLKAK-ESKLNPDWVTYSVLTNLYAKTDNLEKAKLA-LKEMEKL 288
Query: 294 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 353
++++ + Y LI L+A LG+KD ++ WK +R + +KM Y+ ++S+ + LG ++
Sbjct: 289 VSKKNRVAYASLISLHANLGDKDGVNLTWKKVRSSFKKMNDAEYLSMISAVVKLGEFEQA 348
Query: 354 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 404
+ D+W +S + D N +L + + +F+ +++K P+
Sbjct: 349 KGLYDEW-ESVSGTGDARIPNLILAEYMNRDEILLGEKFYERIVEKGINPS 398
>gi|15235508|ref|NP_192191.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213327|sp|Q9SY07.1|PP302_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g02820, mitochondrial; Flags: Precursor
gi|4263527|gb|AAD15353.1| hypothetical protein [Arabidopsis thaliana]
gi|7269767|emb|CAB77767.1| hypothetical protein [Arabidopsis thaliana]
gi|332656833|gb|AEE82233.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 532
Score = 220 bits (561), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 120/369 (32%), Positives = 211/369 (57%), Gaps = 4/369 (1%)
Query: 36 SSGSSQNECLDEETSNSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHIL 95
S G E +++ + G+D L R+ + KRSA I++W EG+ EL I+
Sbjct: 41 SGGGKGGESANKKETVVGGRDTLGGRLLSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIV 100
Query: 96 KELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAK 155
+ELRK +RYKHALEI EWMV ++ L DYA +DL++K+ G++S E++FE +P +
Sbjct: 101 RELRKIKRYKHALEICEWMVVQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMR 160
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
T+LLH Y K ++KAE LFE++ + + L YN M+++Y+S GQ EKV +++
Sbjct: 161 GHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLI 220
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275
+E+K + PDI TYNLW+++ A+ +++ +K + + + + DWV Y L N+Y
Sbjct: 221 KELKIRT-SPDIVTYNLWLTAFASGNDVEGAEKVYLK-AKEEKLNPDWVTYSVLTNLYAK 278
Query: 276 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
++ A + L E EK ++++ + Y LI L+A LG+KD ++ WK ++ + +KM
Sbjct: 279 TDNVEKARLA-LKEMEKLVSKKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDA 337
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 395
Y+ ++S+ + LG ++ + D+W +S + D N +L + + +F+
Sbjct: 338 EYLSMISAVVKLGEFEQAKGLYDEW-ESVSGTGDARIPNLILAEYMNRDEVLLGEKFYER 396
Query: 396 LLQKNCAPT 404
+++K P+
Sbjct: 397 IVEKGINPS 405
>gi|17064738|gb|AAL32523.1| Unknown protein [Arabidopsis thaliana]
gi|27311917|gb|AAO00924.1| Unknown protein [Arabidopsis thaliana]
Length = 532
Score = 220 bits (561), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 120/369 (32%), Positives = 211/369 (57%), Gaps = 4/369 (1%)
Query: 36 SSGSSQNECLDEETSNSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHIL 95
S G E +++ + G+D L R+ + KRSA I++W EG+ EL I+
Sbjct: 41 SGGGKGGESANKKETVVGGRDTLGGRLLSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIV 100
Query: 96 KELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAK 155
+ELRK +RYKHALEI EWMV ++ L DYA +DL++K+ G++S E++FE +P +
Sbjct: 101 RELRKIKRYKHALEICEWMVVQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMR 160
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
T+LLH Y K ++KAE LFE++ + + L YN M+++Y+S GQ EKV +++
Sbjct: 161 GHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLI 220
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275
+E+K + PDI TYNLW+++ A+ +++ +K + + + + DWV Y L N+Y
Sbjct: 221 KELKIRT-SPDIVTYNLWLTAFASGNDVEGAEKVYLK-AKEEKLNPDWVTYSVLTNLYAK 278
Query: 276 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
++ A + L E EK ++++ + Y LI L+A LG+KD ++ WK ++ + +KM
Sbjct: 279 TDNVEKARLA-LREMEKLVSKKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDA 337
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 395
Y+ ++S+ + LG ++ + D+W +S + D N +L + + +F+
Sbjct: 338 EYLSMISAVVKLGEFEQAKGLYDEW-ESVSGTGDARIPNLILAEYMNRDEVLLGEKFYER 396
Query: 396 LLQKNCAPT 404
+++K P+
Sbjct: 397 IVEKGINPS 405
>gi|449462348|ref|XP_004148903.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Cucumis sativus]
gi|449491586|ref|XP_004158945.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Cucumis sativus]
Length = 531
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 122/351 (34%), Positives = 196/351 (55%), Gaps = 4/351 (1%)
Query: 54 GKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEW 113
G+D L R+ + PKRSA I++W EG EL ++ELRK +RYKHALE+ EW
Sbjct: 46 GRDTLGRRLMSLIFPKRSAVTAIRKWQEEGRTVRKYELNRNVRELRKLKRYKHALEVCEW 105
Query: 114 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 173
M K+ L DYA +DL+ K+ G++ E++FE LP + T+LLH Y +
Sbjct: 106 MTLQKDMRLVPGDYAVHLDLICKIRGLNRAEKFFEDLPDKIREQSVCTSLLHAYVQNNLS 165
Query: 174 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 233
EKAE L E++ + + L +N M++L++S Q+EKV ++E +K KN PD+ TYNL
Sbjct: 166 EKAEALMEKMSECGFLKSPLSFNHMLSLHISNKQLEKVPALIEGLK-KNTKPDVVTYNLL 224
Query: 234 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 293
++ C + + + EM + DWV + L N+Y + L ++TL E EK
Sbjct: 225 LNVCTLQNDTEAAENIFLEMK-KTKIQPDWVSFSTLANLYC-KNQLTEKAAATLKEMEKM 282
Query: 294 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 353
+ ++ L+ LY LG+K+++ +IWK L+ + +KM+ R Y+C++SS + L L+E
Sbjct: 283 AFKSNRLSLSSLLSLYTNLGDKNEVYRIWKKLKSSFRKMSDREYMCMISSLVKLNELEEA 342
Query: 354 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 404
++ +W +S + D N +LGA+ E+A F+ +LQK P+
Sbjct: 343 EKLYTEW-ESVSGTRDTRVSNVMLGAYIKKNQIEQAESFYNRMLQKGTVPS 392
>gi|226530677|ref|NP_001151760.1| tetratricopeptide-like helical [Zea mays]
gi|195649553|gb|ACG44244.1| tetratricopeptide-like helical [Zea mays]
gi|223942137|gb|ACN25152.1| unknown [Zea mays]
gi|413916645|gb|AFW56577.1| Tetratricopeptide-like helical [Zea mays]
Length = 501
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 120/351 (34%), Positives = 191/351 (54%), Gaps = 4/351 (1%)
Query: 54 GKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEW 113
G D L R+ ++ PKRSA V+QRW EG +L +++ELRK R+KHALEI EW
Sbjct: 29 GGDTLGKRLLKLIYPKRSAVVVLQRWADEGRTVQKYQLNRVVRELRKYGRFKHALEICEW 88
Query: 114 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 173
M T E L D+A +DL+ KV G+ S ++FE +P AK T ALLH Y
Sbjct: 89 MRTQPEMRLLPGDHAVHLDLVAKVRGLASATKFFEDMPERAKGPSTCNALLHAYVQNGAR 148
Query: 174 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 233
EKAE + + + AL +N MM+LYM+ G++E+V +++E+ R+ +PD+ TYN+W
Sbjct: 149 EKAEAMLAEMARVGYLTCALPFNHMMSLYMATGELERVPEMIKEL-RRYTLPDLVTYNIW 207
Query: 234 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 293
++ C+ ++ +K M D DW+ + L +IYI A V ++ LVE EK
Sbjct: 208 LTYCSKKDSVKSAEKVFGLMK-DDCVVPDWMTFSLLGSIYINAGLHVEGRNA-LVEMEKR 265
Query: 294 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 353
++++ Y L+ LYA L ++ +D++W +R T +K + Y C+L+S L +
Sbjct: 266 ASRKERAAYSSLLTLYASLSDRGNLDRVWNKMRGTFRKFSDTEYKCMLTSLLRFDDIAAA 325
Query: 354 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 404
I +W +S + D N +L + G+ +KA F +++K P+
Sbjct: 326 ESIFSEW-ESTSGTRDSRIPNTILSYYIKNGMIKKAESFLDHIVEKGVKPS 375
>gi|357151797|ref|XP_003575907.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Brachypodium distachyon]
Length = 501
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 120/353 (33%), Positives = 192/353 (54%), Gaps = 6/353 (1%)
Query: 56 DDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMV 115
D L R+ ++ PKRSA V++RW EG +L +++ELRK +R+KHALEI EWM
Sbjct: 30 DTLGKRLLKLMYPKRSAVVVLRRWTEEGRTVQKYQLNRVVRELRKYRRFKHALEICEWMR 89
Query: 116 THKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEK 175
T E L D+A +DL+ KV G+ S E++FE +P AK T ALLH Y +K
Sbjct: 90 TQPEMKLLPGDHAVHLDLVAKVRGLASAEKFFEDVPERAKGPSTCNALLHAYVQNGVRDK 149
Query: 176 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
AE + + + AL +N MM++YMS G++EKV +++E+ R+ +PD+ TYN+W++
Sbjct: 150 AEAMLREMADAGYLTCALPFNHMMSMYMSSGELEKVPEMIKEL-RRYTIPDLVTYNIWLT 208
Query: 236 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 295
C+ ++ +K D M D DW+ + + +IYI A V + LVE EK +
Sbjct: 209 YCSRKNSVKTAEKVFDLMK-DDKVFPDWMTFSLMASIYINAGLHVKGRDA-LVEMEKRAS 266
Query: 296 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 355
+++ Y L+ LYA L ++ +D++W +R +K + Y C+L+S G +
Sbjct: 267 RKERTAYSSLLTLYASLSDRGNLDRVWSKMREIFRKFSDTEYKCMLTSLTRFGDITAAES 326
Query: 356 IIDQWK-QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
+ +W+ +S T D I N +L G E A F ++QK P+ ++
Sbjct: 327 VYSEWESESGTRDSRIP--NTILSFHIKNGKMEMAESFLQHIMQKGVKPSYST 377
>gi|242083618|ref|XP_002442234.1| hypothetical protein SORBIDRAFT_08g016710 [Sorghum bicolor]
gi|241942927|gb|EES16072.1| hypothetical protein SORBIDRAFT_08g016710 [Sorghum bicolor]
Length = 501
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 119/349 (34%), Positives = 191/349 (54%), Gaps = 4/349 (1%)
Query: 56 DDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMV 115
D L R+ ++ PKRSA V++RW EG +L +++ELRK R+KHALEI EWM
Sbjct: 30 DTLGKRLLKLIYPKRSAVVVLRRWAEEGRTVEKYQLNRVVRELRKYGRFKHALEICEWMR 89
Query: 116 THKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEK 175
T E L D+A +DL+ KV G+ S ++FE +P AK T ALLH Y EK
Sbjct: 90 TRPEMRLLPGDHAVHLDLVAKVRGLASAVKFFEDMPERAKAPSTCNALLHAYVQHGAREK 149
Query: 176 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
AE + + ++ AL +N MM+LYM+ G++E+V +++E+ R+ VPD+ TYN+W++
Sbjct: 150 AEAMMAEMARAGYLTCALPFNHMMSLYMASGELERVPEMIKEL-RRYTVPDLVTYNMWLT 208
Query: 236 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 295
C+ ++ +K M D DW+ + L +IYI A V ++ LVE EK +
Sbjct: 209 YCSKKKSVKSAEKVFALMK-DDRVVPDWMTFSLLGSIYINAGLHVEGRNA-LVEMEKMAS 266
Query: 296 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 355
+++ Y L+ LYA L ++ +D++W +R T +K + Y C+L+S +
Sbjct: 267 RKERAAYSSLLTLYASLSDRGNLDRVWNKMRETFRKFSDTEYKCMLTSLTRFNDIAAAEG 326
Query: 356 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 404
+ +W +SA+ D N +L + G+ EKA F +++K P+
Sbjct: 327 LYREW-ESASGTRDSRIPNTILSYYIKNGMIEKAESFLGQIVEKGVKPS 374
>gi|224114960|ref|XP_002316903.1| predicted protein [Populus trichocarpa]
gi|222859968|gb|EEE97515.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 122/343 (35%), Positives = 194/343 (56%), Gaps = 3/343 (0%)
Query: 57 DLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVT 116
+L SRI + P+ S V+ +WV EG + ELR I+K LR+ +R+K ALE+S+WM +
Sbjct: 1 NLYSRISPLGDPRISLAPVLDQWVEEGKKVKDYELRTIVKGLRERKRFKQALEVSQWMSS 60
Query: 117 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKA 176
++ S SD A R+DL+ KV G+ S E YF+ L K +TY ALL+ Y EK+
Sbjct: 61 NRLCNFSPSDDAVRLDLIGKVHGLESAESYFKNLDEKDKIHKTYGALLNCYVRGGLVEKS 120
Query: 177 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 236
+++K+ AL YN++M LY++ G +EKV V+ ++K + PD+F+Y + + S
Sbjct: 121 LSHVQKMKELGFFSTALNYNDLMCLYVNTGLLEKVPDVLSDMKENGISPDLFSYRICLKS 180
Query: 237 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 296
+ D V+K L EM S S DW + + NIY+ A L L + E+ + +
Sbjct: 181 YGERSDFDNVEKILREMESQSHISMDWRTFATVANIYLEAG-LKEKALVYLKKCEEKVNK 239
Query: 297 RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 356
+ Y+ LI LYA LGNKD++ ++W+ + +K +R+YI IL S + LGHL+E ++
Sbjct: 240 NA-LGYNHLISLYASLGNKDEMMRLWELAKANCKKQLNRDYITILGSLVKLGHLEEAEKL 298
Query: 357 IDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 399
+ W +S+ +D N +L +S GL EKA +++K
Sbjct: 299 LQDW-ESSCQYYDFRVPNVVLIGYSRKGLPEKAEAMLQDIIEK 340
>gi|255556039|ref|XP_002519054.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541717|gb|EEF43265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 485
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 120/358 (33%), Positives = 204/358 (56%), Gaps = 2/358 (0%)
Query: 50 SNSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALE 109
+N K L S+I + P S + WV +GN+ V EL+ I+++LRK R+ ALE
Sbjct: 8 ANRTKKVTLYSKISPLGDPNTSLVPELDNWVQDGNKVRVGELQRIIRDLRKRNRFTQALE 67
Query: 110 ISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAG 169
+SEWM + S +++A ++DL+ KV G S E YF L KT +TY ALL+ Y
Sbjct: 68 VSEWMNKKGICIFSSTEHAVQLDLIGKVRGFLSAENYFNNLMDHDKTDKTYGALLNCYVR 127
Query: 170 AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFT 229
+ T+++ ++++K+ L+ + L YN++M LY+++G EKV V+ E+K + PD F+
Sbjct: 128 QRQTDRSISHWQKMKEMGLASSPLAYNDIMCLYINLGLYEKVLHVLTEMKENKISPDNFS 187
Query: 230 YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVE 289
Y + I+S A +I ++K L+EM C G + DW Y + N YI A L + L +
Sbjct: 188 YRICINSYGARSDIQGMEKVLNEMECRLGNAMDWNTYAVVANFYIKAG-LADKAVDALRK 246
Query: 290 AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGH 349
+E+ + ++ I Y+ LI LYA LG K ++ +IW + ++ +R+++ +L S + LG
Sbjct: 247 SEEKLDKKDGIGYNHLISLYATLGIKSEVLRIWDLQKSVCKRRINRDFVTMLESLVKLGD 306
Query: 350 LKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
L+E +++ +W +S+ + +D+ N ++ +S GL EKA L++K A T S
Sbjct: 307 LEEAEKVLKEW-ESSGNFYDVRIPNIVVVGYSKNGLHEKAEASLEALMEKGRATTPNS 363
>gi|225453344|ref|XP_002270492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02150
[Vitis vinifera]
Length = 527
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 121/338 (35%), Positives = 189/338 (55%), Gaps = 11/338 (3%)
Query: 64 RISL---PKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKE- 119
RISL P+ + +V+ +W +EG + T EL ++KELRK +R+K ALE+ EWM E
Sbjct: 63 RISLMENPEMGSASVLNQWENEGKRLTKWELCRVVKELRKFKRFKMALEVYEWMNNRGER 122
Query: 120 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEEL 179
F LS SD A ++DL+ KV G+ S E YF LP + K Y ALL+ Y AK +KAE L
Sbjct: 123 FRLSSSDAAIQLDLIAKVCGVSSAEDYFSRLPDTLKDKRIYGALLNAYVQAKMRDKAEIL 182
Query: 180 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 239
E+++ + L +N MMTLYM++ +++KV ++ E+ KN+ DI++YN+W+SSC +
Sbjct: 183 IEKLRNKGYATTPLPFNVMMTLYMNLKELDKVQSMISEMMNKNIQLDIYSYNIWLSSCES 242
Query: 240 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 299
T ++QV ++M + + +W + + +YI AE L + E IT R
Sbjct: 243 TERMEQV---FEQMKLERTINPNWTTFSTMATMYIKLGQFEKAE-ECLKKVESRITNRDR 298
Query: 300 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 359
+ Y +LI LY GNK ++ + W + + + Y ++SS + +G L+ +I ++
Sbjct: 299 MPYHYLISLYGSTGNKAEVYRAWNIYKSKFPNIPNLGYHALISSLVRVGDLEGAEKIYEE 358
Query: 360 WKQSATSDFDISACNRLLGAFSDVGLTEKANEF--HML 395
W S S +D N LLG + G EKA F HM+
Sbjct: 359 W-LSVKSSYDPRIGNLLLGCYVKEGFLEKAEGFLDHMI 395
>gi|297837423|ref|XP_002886593.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332434|gb|EFH62852.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 491
Score = 204 bits (518), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 115/303 (37%), Positives = 178/303 (58%), Gaps = 3/303 (0%)
Query: 90 ELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEG 149
E+ +K+LR Y AL++SE M + + SD A +DL+ K GI +GE YF
Sbjct: 57 EVGDTIKKLRNRGLYYPALKLSEVM-EERGMNKTVSDQAIHLDLVAKARGITAGENYFVD 115
Query: 150 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 209
LP ++KT TY +LL+ Y TEKAE L ++K+ N++ +++ YN +MTLY GQ E
Sbjct: 116 LPETSKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGQTE 175
Query: 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
KV +++E+K +NV+PD +TYN+W+ + AAT +I V++ ++EM+ D + DW Y N+
Sbjct: 176 KVPAMIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNM 235
Query: 270 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
+IY+ A AE + L E E TQR + Y FLI LY LG ++ +IW+SLR+
Sbjct: 236 ASIYVDAGLSQKAEKA-LQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAM 294
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
K ++ Y+ ++ + L L + +W Q+ S +DI N L+GA++ GL EKA
Sbjct: 295 PKTSNVAYLNMIQVLVKLNDLPGAETLFKEW-QANCSTYDIRIVNVLIGAYAKEGLIEKA 353
Query: 390 NEF 392
E
Sbjct: 354 KEL 356
>gi|147807263|emb|CAN64166.1| hypothetical protein VITISV_006333 [Vitis vinifera]
Length = 506
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 120/346 (34%), Positives = 194/346 (56%), Gaps = 2/346 (0%)
Query: 54 GKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEW 113
GK L ++I + P S + WV GN+ V+EL+ I+ +LRK +R+ ALEISEW
Sbjct: 37 GKISLYNKISPLGDPNTSVVPELDNWVQNGNKVWVAELQRIIHDLRKRKRFSQALEISEW 96
Query: 114 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 173
M S +++A ++DL+ +V G S E YF L KT +TY ALL+ Y + T
Sbjct: 97 MSKKGICAFSPTEHAVQLDLIGRVRGFLSAESYFNSLQNHDKTDKTYGALLNCYVRQRQT 156
Query: 174 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 233
+K+ +++K+ + + L YN++M LY +VGQ EKV V+ E+K+ +V PD F+Y +
Sbjct: 157 DKSLSHLQKMKEMGFASSPLTYNDIMCLYTNVGQHEKVPDVLTEMKQSHVYPDNFSYRIC 216
Query: 234 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 293
I+S AA +I ++K L EM DW Y N YI A L + L ++E+
Sbjct: 217 INSYAAQSDIQGMEKVLKEMERQPHIVMDWNTYAVAANFYIKAG-LPDKAIEALKKSEER 275
Query: 294 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 353
+ +R + Y+ LI LYA LGNK ++ ++W + ++ +R+YI +L S + LG L+E
Sbjct: 276 LDKRDGLGYNHLISLYASLGNKAEVLRLWSLEKSACKRNINRDYITMLESLVRLGELEEA 335
Query: 354 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 399
+++ +W+ S +D N ++ +S+ GL EKA L++K
Sbjct: 336 EKVLREWESSGNC-YDFRVPNIVIIGYSEKGLFEKAEAMLKELMEK 380
>gi|449470082|ref|XP_004152747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Cucumis sativus]
Length = 439
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/378 (32%), Positives = 198/378 (52%), Gaps = 16/378 (4%)
Query: 33 RFLSSGSSQNECLDEETSNS-----DGKDD--LKSRIFRISLPKRSATNVIQRWVSEGNQ 85
R LSS +S+ + L + S +G DD K ++ LP+ S V+QR
Sbjct: 37 RSLSSPTSRVDSLATTSVVSSKILQNGGDDGKFKQEFMKLKLPRSSVNTVLQR------- 89
Query: 86 ATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGER 145
++++LR ++K+ KS+R++ ALE M T F + +++A R++L K G+ E
Sbjct: 90 TSITKLRRVVKKFCKSKRFERALEALILMETRDNFRMYPAEHALRLELTIKAHGLLKAEE 149
Query: 146 YFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSV 205
YF LP A + LLH Y + TEKAE +++ S L N +YNEMM LY++
Sbjct: 150 YFNQLPTIASQKASSLPLLHGYVKERNTEKAEAFMVKLRDSGLVVNHHLYNEMMKLYVAT 209
Query: 206 GQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVK 265
Q EKV LV++++K+ + ++ +YNLW+++C+ + ++ +EM D W
Sbjct: 210 YQNEKVPLVIKDMKQNQIPRNVLSYNLWMNACSELYGVGSIELVFEEMLTDKNVQVGWST 269
Query: 266 YVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 325
L N+YI LV + L EAEK ++ + + Y FLI LYA L +K+ + ++W++
Sbjct: 270 MCTLANVYIQEG-LVEKAFAALKEAEKKLSPCKRLGYFFLITLYASLKDKEGVFRVWRAS 328
Query: 326 RMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGL 385
+ T NYICIL + LG + + ++ +W+ + ++DI N LLGA+ GL
Sbjct: 329 KAVSGNPTCANYICILLCLVKLGEIDKAEKVFKEWELNC-RNYDIRVSNVLLGAYVRNGL 387
Query: 386 TEKANEFHMLLLQKNCAP 403
EKA H L + P
Sbjct: 388 LEKAESLHRHTLGRGGNP 405
>gi|224063635|ref|XP_002301239.1| predicted protein [Populus trichocarpa]
gi|222842965|gb|EEE80512.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/348 (33%), Positives = 194/348 (55%), Gaps = 6/348 (1%)
Query: 64 RISL---PKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKE- 119
RISL P+ + +V+ +W ++G + T EL ++KELRK +RY+ ALE+ +WM +E
Sbjct: 74 RISLMENPELGSGSVLNQWENDGKRLTKWELCRVVKELRKYKRYQQALEVYDWMNNRQER 133
Query: 120 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEEL 179
F LS SD A ++DL+ KV G+ S E +F LP + K Y ALL+ Y + EKAE L
Sbjct: 134 FGLSPSDAAIQLDLIAKVRGVSSAEDFFLRLPNTFKDRRIYGALLNAYVRNRMREKAESL 193
Query: 180 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 239
+ ++ + +AL YN MMTLYM++ + +KV L++ E+ KN+ DI++YN+W+SSC
Sbjct: 194 IDEMRGKDYVTHALPYNVMMTLYMNINEYDKVDLIISEMNEKNIKLDIYSYNIWLSSCGL 253
Query: 240 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 299
+ D++++ ++M D + +W + + +YI AE L E IT R
Sbjct: 254 QGSADKMEQVFEQMKSDGSINPNWTTFSTMATMYIKMGKFEKAE-DCLRRVESRITGRDR 312
Query: 300 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 359
I Y +L+ LY +GNK+++ ++W + + + Y ++SS + + ++ +I ++
Sbjct: 313 IPYHYLLSLYGNVGNKEEVYRVWNIYKSIFPSIPNLGYHAMISSLVRMDDIEGAEKIYEE 372
Query: 360 WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
W TS +D N + AF G +KA F +L++ P + S
Sbjct: 373 WLSIKTS-YDPRIANLFMAAFVYQGNLDKAESFFDHMLEEGGKPNSHS 419
>gi|15240937|ref|NP_198098.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214236|sp|Q3E911.1|PP400_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27460
gi|332006308|gb|AED93691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 491
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/362 (33%), Positives = 193/362 (53%), Gaps = 11/362 (3%)
Query: 48 ETSNSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHA 107
+TS+ ++ LK I R + P+RS T+++Q + G+ ++SELR I K L +S RY A
Sbjct: 31 DTSSVANRNSLKE-ILRKNGPRRSVTSLLQERIDSGHAVSLSELRLISKRLIRSNRYDLA 89
Query: 108 LEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGL---PLSAKTSET-YTAL 163
L++ EWM K+ S D A R+DL+ K G+ GE YFE L +S + +++ Y L
Sbjct: 90 LQMMEWMENQKDIEFSVYDIALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLPL 149
Query: 164 LHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNV 223
L Y K ++AE L E++ +NEMM LY + GQ EKV +VV +K +
Sbjct: 150 LRAYVKNKMVKEAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKI 209
Query: 224 VPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAE 283
++ +YNLW+++C + V+ EM D W L N+YI + E
Sbjct: 210 PRNVLSYNLWMNACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSGF---DE 266
Query: 284 SSTLV--EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICIL 341
+ LV +AEK + + + Y FLI LYA LGNK+ + ++W+ + +++ NYIC+L
Sbjct: 267 KARLVLEDAEKMLNRSNRLGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVL 326
Query: 342 SSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 401
SS + G L+E + +W ++ ++D+ N LLGA+ G KA H +L++
Sbjct: 327 SSLVKTGDLEEAERVFSEW-EAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGG 385
Query: 402 AP 403
P
Sbjct: 386 TP 387
>gi|449515498|ref|XP_004164786.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Cucumis sativus]
Length = 439
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/379 (32%), Positives = 200/379 (52%), Gaps = 18/379 (4%)
Query: 33 RFLSSGSSQNECLDEETSNS-----DGKDD--LKSRIFRISLPKRSATNVIQRWVSEGNQ 85
R LSS +S + L + S +G DD K ++ LP+ S V+QR
Sbjct: 37 RSLSSPTSPVDSLATTSVVSSKILQNGGDDGKFKQEFMKLKLPRSSVNTVLQR------- 89
Query: 86 ATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGER 145
++++LR ++K+ KS+RY+ ALE M T F + +++A R++L K G+ E
Sbjct: 90 TSITKLRRVVKKFCKSKRYERALEALILMETRDNFRMYPAEHALRLELTIKAHGLLKAEE 149
Query: 146 YFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSV 205
YF LP A + LLH Y + TEKAE +++ S L N +YNEMM LY++
Sbjct: 150 YFNQLPTIASQKASSLPLLHGYVKERNTEKAEAFMVKLRDSGLVVNHHLYNEMMKLYVAT 209
Query: 206 GQVEKVALVVEEIKRKNVVP-DIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWV 264
Q EKV LV++++K +N++P ++ +YNLW+++C+ + ++ +EM D W
Sbjct: 210 YQNEKVPLVIKDMK-QNLIPRNVLSYNLWMNACSELYGVGSIELVFEEMLTDKNVQVGWS 268
Query: 265 KYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS 324
L N+YI LV + L EAEK ++ + + Y FLI LYA L +K+ + ++W++
Sbjct: 269 TMCTLANVYIQEG-LVEKAFAALKEAEKKLSPCKRLGYFFLITLYASLKDKEGVFRVWRA 327
Query: 325 LRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 384
+ T NYICIL + LG + + ++ +W+ + ++DI N LLGA+ G
Sbjct: 328 SKAVSGNPTCANYICILLCLVKLGEIDKAEKVFKEWELNC-RNYDIRVSNVLLGAYVRNG 386
Query: 385 LTEKANEFHMLLLQKNCAP 403
L EKA H L + P
Sbjct: 387 LLEKAESLHRHTLGRGGNP 405
>gi|359483464|ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Vitis vinifera]
Length = 506
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 119/346 (34%), Positives = 192/346 (55%), Gaps = 2/346 (0%)
Query: 54 GKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEW 113
GK L ++I + P S + WV GN+ V+EL+ I+ +LRK +R+ ALEISEW
Sbjct: 37 GKISLYNKISPLGDPNTSVVPELDNWVQNGNKVWVAELQRIIHDLRKRKRFSQALEISEW 96
Query: 114 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 173
M S +++A ++DL+ +V G S E YF L KT +TY ALL+ Y + T
Sbjct: 97 MSKKGICAFSPTEHAVQLDLIGRVRGFLSAESYFNSLQNHDKTDKTYGALLNCYVRQRQT 156
Query: 174 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 233
+K+ +++K+ + + L YN++M LY +VGQ EKV V+ E+K+ NV PD F+Y +
Sbjct: 157 DKSLSHLQKMKEMGFASSPLTYNDIMCLYTNVGQHEKVPDVLTEMKQSNVYPDNFSYRIC 216
Query: 234 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 293
I+S A +I ++ L EM DW Y N YI A L + L ++E+
Sbjct: 217 INSYGAQSDIQGMENVLKEMERQPHIVMDWNTYAVAANFYIKAG-LPDKAIEALKKSEER 275
Query: 294 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 353
+ +R + Y+ LI LYA LGNK ++ ++W + ++ +R+YI +L S + LG L+E
Sbjct: 276 LDKRDGLGYNHLISLYASLGNKAEVLRLWSLEKSACKRNINRDYITMLESLVRLGELEEA 335
Query: 354 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 399
+++ +W+ S +D N ++ +S+ GL EKA L++K
Sbjct: 336 EKVLREWESSGNC-YDFRVPNIVIIGYSEKGLFEKAEAMLKELMEK 380
>gi|297734632|emb|CBI16683.3| unnamed protein product [Vitis vinifera]
Length = 423
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 117/331 (35%), Positives = 185/331 (55%), Gaps = 8/331 (2%)
Query: 68 PKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKE-FVLSDSD 126
P+ + +V+ +W +EG + T EL ++KELRK +R+K ALE+ EWM E F LS SD
Sbjct: 4 PEMGSASVLNQWENEGKRLTKWELCRVVKELRKFKRFKMALEVYEWMNNRGERFRLSSSD 63
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQS 186
A ++DL+ KV G+ S E YF LP + K Y ALL+ Y AK +KAE L E+++
Sbjct: 64 AAIQLDLIAKVCGVSSAEDYFSRLPDTLKDKRIYGALLNAYVQAKMRDKAEILIEKLRNK 123
Query: 187 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 246
+ L +N MMTLYM++ +++KV ++ E+ KN+ DI++YN+W+SSC +T ++QV
Sbjct: 124 GYATTPLPFNVMMTLYMNLKELDKVQSMISEMMNKNIQLDIYSYNIWLSSCESTERMEQV 183
Query: 247 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI 306
++M + + +W + + +YI AE L + E IT R + Y +LI
Sbjct: 184 ---FEQMKLERTINPNWTTFSTMATMYIKLGQFEKAE-ECLKKVESRITNRDRMPYHYLI 239
Query: 307 ILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATS 366
LY GNK ++ + W + + + Y ++SS + +G L+ +I ++W S S
Sbjct: 240 SLYGSTGNKAEVYRAWNIYKSKFPNIPNLGYHALISSLVRVGDLEGAEKIYEEW-LSVKS 298
Query: 367 DFDISACNRLLGAFSDVGLTEKANEF--HML 395
+D N LLG + G EKA F HM+
Sbjct: 299 SYDPRIGNLLLGCYVKEGFLEKAEGFLDHMI 329
>gi|224137116|ref|XP_002327026.1| predicted protein [Populus trichocarpa]
gi|222835341|gb|EEE73776.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 114/344 (33%), Positives = 191/344 (55%), Gaps = 6/344 (1%)
Query: 64 RISL---PKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKE- 119
RISL P+ + +V+ RW +EG + T EL ++KELRK +RY+ ALE+ +WM +E
Sbjct: 74 RISLMENPELGSGSVLNRWENEGKRLTKWELCRVVKELRKYKRYQQALEVYDWMKNRQER 133
Query: 120 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEEL 179
F LS SD A ++DL+ KV G+ + E +F LP + K Y ALL+ Y + EKAE L
Sbjct: 134 FRLSPSDAAIQLDLIAKVRGVSTAEDFFLSLPNTFKDRRVYGALLNAYVQNRMREKAETL 193
Query: 180 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 239
F+ ++ +AL +N MTLYM++ + +KV L++ E+ KN+ DI++YN+W+SSC +
Sbjct: 194 FDEMRDKGYVTHALPFNVTMTLYMNIKEYDKVDLMISEMNEKNIKLDIYSYNIWLSSCGS 253
Query: 240 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 299
+ D++++ ++M D + +W + + +YI AE L E IT R
Sbjct: 254 QGSADKMEQVYEQMKSDRSINPNWTTFSTMATMYIKMGQFEKAE-DCLRRVESRITGRDR 312
Query: 300 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 359
I Y +L+ LY +GNK+++ ++W + + + Y I+SS + L ++ +I ++
Sbjct: 313 IPYHYLLSLYGNVGNKEEVYRVWNIYKSIFPSIPNLGYHAIISSLVRLDDIEGAEKIYEE 372
Query: 360 WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
W TS +D N + A+ G ++A F +L+ P
Sbjct: 373 WLSIKTS-YDPRIANLFIAAYVYQGNLDEAKSFFDHMLEDGGKP 415
>gi|224084592|ref|XP_002307350.1| predicted protein [Populus trichocarpa]
gi|222856799|gb|EEE94346.1| predicted protein [Populus trichocarpa]
Length = 511
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 111/353 (31%), Positives = 183/353 (51%), Gaps = 6/353 (1%)
Query: 51 NSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEI 110
+S L++ I R+ P R V+Q W++ GN+ +S+L I K+L KS+RYK ALEI
Sbjct: 45 HSSSSSRLETEILRLKSPSR----VLQDWINNGNKVKLSQLNLISKQLLKSKRYKQALEI 100
Query: 111 SEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGA 170
+WM F ++ +A ++L+ KV G++ YFE +P S LLH Y
Sbjct: 101 LQWMENQNNFRITPGHHALMMELIVKVNGLNKAGEYFERIPGSGSKKAASLPLLHGYVKE 160
Query: 171 KWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 230
+ KAE ++ S L YNEMM LYM++ Q EKV LV+ E+KR + ++ +Y
Sbjct: 161 RDISKAESFMIKLSSSGLLVTPHPYNEMMKLYMALSQYEKVPLVIAEMKRNKLCRNVLSY 220
Query: 231 NLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 290
NLW+ + + + + EM D W +L N+YI A V+ L +A
Sbjct: 221 NLWMGAFGEVFEVAKAEMVYKEMVSDENVGVGWSTLASLANVYIKAG-FVDKALLVLKDA 279
Query: 291 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 350
E ++ + Y FLI LY+ L NK+ + ++W++ + ++ +Y+C++S + +G L
Sbjct: 280 EMKLSTNGRLGYFFLITLYSSLKNKEGVLRLWEASKAVGGRIPCADYMCVISCLVKVGDL 339
Query: 351 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
++ +W ++ +DI N LLGA+ GL KA FH+ +++ P
Sbjct: 340 VAAEQVFAEW-ETNCFKYDIRVSNVLLGAYVRNGLMGKAESFHLHTVERGGCP 391
>gi|356522970|ref|XP_003530115.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Glycine max]
Length = 546
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 120/389 (30%), Positives = 206/389 (52%), Gaps = 17/389 (4%)
Query: 28 CFFYSRFLSSGSSQNEC----------LDEETSNSDGKDDLKSRIFRISLPKRSATNVIQ 77
CF++ R S C +D E G +D+ RI P+ + V+
Sbjct: 47 CFYHPRL----SVVTTCSISKIHSYGTVDYERRPIVGWNDVYRRISLNPNPQVGSAEVLN 102
Query: 78 RWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKE-FVLSDSDYATRIDLMTK 136
+W +EG T EL ++KELRK +R++ ALE+ +WM E F +S+SD A ++DL+ K
Sbjct: 103 QWENEGRHLTKWELSRVVKELRKYKRFRRALEVYDWMNNRPERFRVSESDAAIQLDLIAK 162
Query: 137 VFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYN 196
V G+ S E +F L K +TY ALL++Y ++ EKAE LF+ ++ +AL +N
Sbjct: 163 VRGLSSAEAFFLSLEDKLKDKKTYGALLNVYVHSRSKEKAESLFDTMRSKGYVIHALPFN 222
Query: 197 EMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCD 256
MMTLYM++ + KV ++ E+ KN+ DI+TYN+W+SSC + +++++++ ++M D
Sbjct: 223 VMMTLYMNLNEYAKVDILASEMMEKNIQLDIYTYNIWLSSCGSQGSVEKMEQVFEQMEKD 282
Query: 257 SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKD 316
+W + + ++YI AE L + E I R I + +L+ LY +G KD
Sbjct: 283 PSIIPNWSTFSTMASMYIRMDQNEKAE-ECLRKVEGRIKGRDRIPFHYLLSLYGSVGKKD 341
Query: 317 KIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRL 376
++ ++W + + + + Y I+SS + L ++ ++ ++W S S +D N L
Sbjct: 342 EVCRVWNTYKSIFPSIPNLGYHAIISSLVKLDDIEVAEKLYEEW-ISVKSSYDPRIGNLL 400
Query: 377 LGAFSDVGLTEKANEFHMLLLQKNCAPTN 405
+G + G T+KA F +L C P +
Sbjct: 401 IGWYVKKGDTDKALSFFEQMLNDGCIPNS 429
>gi|15219808|ref|NP_176276.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097554|sp|O22714.1|PPR86_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g60770
gi|2462744|gb|AAB71963.1| Hypothetical protein [Arabidopsis thaliana]
gi|27754491|gb|AAO22693.1| unknown protein [Arabidopsis thaliana]
gi|28393975|gb|AAO42395.1| unknown protein [Arabidopsis thaliana]
gi|332195609|gb|AEE33730.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 491
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 113/303 (37%), Positives = 178/303 (58%), Gaps = 3/303 (0%)
Query: 90 ELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEG 149
E+ +K+LR Y AL++SE M + + SD A +DL+ K I +GE YF
Sbjct: 57 EVGDTIKKLRNRGLYYPALKLSEVM-EERGMNKTVSDQAIHLDLVAKAREITAGENYFVD 115
Query: 150 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 209
LP ++KT TY +LL+ Y TEKAE L ++K+ N++ +++ YN +MTLY G+ E
Sbjct: 116 LPETSKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETE 175
Query: 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
KV +++E+K +NV+PD +TYN+W+ + AAT +I V++ ++EM+ D + DW Y N+
Sbjct: 176 KVPAMIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNM 235
Query: 270 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
+IY+ A AE + L E E TQR + Y FLI LY LG ++ +IW+SLR+
Sbjct: 236 ASIYVDAGLSQKAEKA-LQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAI 294
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
K ++ Y+ ++ + L L + +W Q+ S +DI N L+GA++ GL +KA
Sbjct: 295 PKTSNVAYLNMIQVLVKLNDLPGAETLFKEW-QANCSTYDIRIVNVLIGAYAQEGLIQKA 353
Query: 390 NEF 392
NE
Sbjct: 354 NEL 356
>gi|296083491|emb|CBI23460.3| unnamed protein product [Vitis vinifera]
Length = 444
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 111/314 (35%), Positives = 179/314 (57%), Gaps = 3/314 (0%)
Query: 90 ELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEG 149
E+ +K+LR +R+ AL++SE M + ++ SD A +DL+TK G+ + E YF
Sbjct: 56 EVGDTVKKLRDRKRFYPALKLSETM-AKRGMNMTISDQAIYLDLITKTRGVAAAENYFID 114
Query: 150 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 209
LP ++K TY ALL+ Y TEKAE L ER+K+ L +++ YN +MTLY +GQ E
Sbjct: 115 LPETSKNHLTYGALLNCYCKELLTEKAEALMERMKELKLGLSSMPYNSLMTLYTKIGQPE 174
Query: 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
K+ +++E+K +++PD +TYN+W+ + AA +I V++ ++EM D + DW Y NL
Sbjct: 175 KIPTIIQELKSLDIMPDSYTYNIWMRALAAVNDISGVERVIEEMKRDGRVASDWTTYSNL 234
Query: 270 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
+IY+ A AE + L E EK R + FLI LY +GN ++ ++W+SLR+
Sbjct: 235 ASIYVDAGVFEKAEKA-LKELEKRNACRDLTAFQFLITLYGRIGNLLEVYRVWRSLRLAF 293
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
K + +Y+ ++ + L L + +W +S S +DI N L+GA++ GL EKA
Sbjct: 294 PKTANVSYLNMIQVLVNLKDLPGAEKCFREW-ESGCSIYDIRVANALIGAYAKDGLLEKA 352
Query: 390 NEFHMLLLQKNCAP 403
E ++ P
Sbjct: 353 EELKEHARRRGAKP 366
>gi|225468646|ref|XP_002267979.1| PREDICTED: pentatricopeptide repeat-containing protein At1g60770
[Vitis vinifera]
Length = 489
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/346 (33%), Positives = 190/346 (54%), Gaps = 3/346 (0%)
Query: 58 LKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTH 117
L R+F+ + S + ++ + E+ +K+LR +R+ AL++SE M
Sbjct: 24 LYDRLFKDGSSEVSVRQQLNHFLKSSKRVFKWEVGDTVKKLRDRKRFYPALKLSETM-AK 82
Query: 118 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 177
+ ++ SD A +DL+TK G+ + E YF LP ++K TY ALL+ Y TEKAE
Sbjct: 83 RGMNMTISDQAIYLDLITKTRGVAAAENYFIDLPETSKNHLTYGALLNCYCKELLTEKAE 142
Query: 178 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 237
L ER+K+ L +++ YN +MTLY +GQ EK+ +++E+K +++PD +TYN+W+ +
Sbjct: 143 ALMERMKELKLGLSSMPYNSLMTLYTKIGQPEKIPTIIQELKSLDIMPDSYTYNIWMRAL 202
Query: 238 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 297
AA +I V++ ++EM D + DW Y NL +IY+ A AE + L E EK R
Sbjct: 203 AAVNDISGVERVIEEMKRDGRVASDWTTYSNLASIYVDAGVFEKAEKA-LKELEKRNACR 261
Query: 298 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 357
+ FLI LY +GN ++ ++W+SLR+ K + +Y+ ++ + L L +
Sbjct: 262 DLTAFQFLITLYGRIGNLLEVYRVWRSLRLAFPKTANVSYLNMIQVLVNLKDLPGAEKCF 321
Query: 358 DQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
+W +S S +DI N L+GA++ GL EKA E ++ P
Sbjct: 322 REW-ESGCSIYDIRVANALIGAYAKDGLLEKAEELKEHARRRGAKP 366
>gi|357131918|ref|XP_003567580.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01990,
mitochondrial-like [Brachypodium distachyon]
Length = 545
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/320 (36%), Positives = 186/320 (58%), Gaps = 4/320 (1%)
Query: 71 SATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATR 130
S + V+ +WV EG +A +L +KELRK +R+ ALE+ +WMV K +S +++A R
Sbjct: 94 SVSRVLNKWVREGREARSVDLERYVKELRKYKRHAQALELMDWMVHTKGMNMSYTNHAIR 153
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSF 190
+DL+ KV GI + E+YF GLP AK TY ALL+ Y +K EKA +LF ++ ++
Sbjct: 154 LDLVYKVRGIEAAEKYFNGLPDPAKNHRTYGALLNCYCSSKKEEKATDLFHKMDDLGIAS 213
Query: 191 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 250
+ L +N +M+LYM +GQ +KVA + EE+K KNV PD T + ++S AA ID V++ L
Sbjct: 214 STLPFNNLMSLYMKLGQHKKVAGLFEEMKAKNVKPDNLTCCVLMTSYAALNKIDAVEEVL 273
Query: 251 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW-ITYDFLIILY 309
EM + + W Y L +IY++A LV S L + E + R +DFL+ LY
Sbjct: 274 KEME-EKNAALGWSAYSTLASIYVSAG-LVEKAESALKKLEGLVQPRDGRQPFDFLMSLY 331
Query: 310 AGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD 369
A +GN +++++W ++ T K+T+ +Y +L + L + +I ++W +S +D
Sbjct: 332 ASVGNLSEVNRVWDVVKATFPKVTNTSYFSMLQALYKLNDADRIKQIFEEW-ESNHECYD 390
Query: 370 ISACNRLLGAFSDVGLTEKA 389
+ N + A GLT++A
Sbjct: 391 VKLTNIMTRAHLKNGLTKEA 410
>gi|449479000|ref|XP_004155477.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 493
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 112/352 (31%), Positives = 196/352 (55%), Gaps = 8/352 (2%)
Query: 55 KDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWM 114
+D L R++R P+ S V+ +WV EG Q S+L+ ++K+LRK R+ AL++ EW+
Sbjct: 35 EDTLFRRVYRAGDPRTSIVRVLDQWVEEGRQVKQSDLQTLIKQLRKFGRFNQALQLCEWV 94
Query: 115 VTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE 174
+ LS D A + L++K G+ E+YF + S++ + Y ALLH Y K +
Sbjct: 95 RNERNQCLSTGDIAVELHLISKARGLEQAEKYFSSIGESSRDHKVYGALLHCYVENKNLK 154
Query: 175 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 234
KAE + +++++ L YN M+ LY +G+ EK+A +++E++ + PD FTYN+ +
Sbjct: 155 KAEAIMQKMREVGFMKTPLSYNAMLNLYAHLGKHEKLAELLKEMEEMGIGPDRFTYNIRM 214
Query: 235 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV--EAEK 292
++ AA +I ++K L +M D + DW Y + N Y A +E+S L+ +AE+
Sbjct: 215 NAYAAASDITNMEKLLSKMEADPLVATDWHTYFVVGNGYFKAGL---SENSILMLKKAEQ 271
Query: 293 SITQRQ-WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLK 351
I +Q W+ Y +L+ LYA +GNKD++ ++W +L +K + Y+CI+SS + L +
Sbjct: 272 FIGDKQKWLAYQYLMTLYAAIGNKDEVYRVW-NLYTNLRKRFNSGYLCIISSLMKLDDID 330
Query: 352 EVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
I+ +W+ TS FD N ++ ++ G +KA + L++ P
Sbjct: 331 GAERILKEWESGDTS-FDFRIPNMMINSYCMKGFVDKAEAYINRLIETGKEP 381
>gi|255573349|ref|XP_002527601.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533018|gb|EEF34782.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 502
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 117/350 (33%), Positives = 195/350 (55%), Gaps = 3/350 (0%)
Query: 58 LKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTH 117
L +RI + P S V+ WV EG + EL+ I+++LR +RY AL++SEWM
Sbjct: 37 LFARISPLGEPDISLVPVLDNWVQEGKKIRGFELQKIIRDLRCHRRYTQALQVSEWMNGK 96
Query: 118 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 177
+ S +D+A ++DL+ +V G+ S E YF+ L + +TY ALL+ Y +K+
Sbjct: 97 GQSGFSPADHAVQLDLIGRVRGLESAESYFQNLVNQDRNDKTYGALLNCYVREGLVDKSL 156
Query: 178 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 237
+++K+ + + L YN++M LY GQ+EKV V+ E+K + PD+F+Y + +SSC
Sbjct: 157 YHMQKMKELGFASSPLNYNDLMCLYTRTGQLEKVTDVLSEMKENGITPDLFSYRICMSSC 216
Query: 238 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 297
AA ++ V++ L+EM S S DWV Y + +IY+ AS L L + E+ + R
Sbjct: 217 AARSDLKGVEEILEEMENQSHISIDWVTYSTVASIYVKAS-LKEKALIYLKKCEQKVN-R 274
Query: 298 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 357
+ Y+ LI L A LG KD++ ++W ++ +K +R+YI +L + + L L+E +++
Sbjct: 275 DALGYNHLISLNASLGIKDEVMRLWGLVKTKCKKQVNRDYITMLGALVKLEELEEADKLL 334
Query: 358 DQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
+W +S+ +D N LL + GL EKA +++K PT S
Sbjct: 335 QEW-ESSCQCYDFRVPNVLLIGYCQQGLIEKAEAMLKDIVKKQKNPTPNS 383
>gi|449432307|ref|XP_004133941.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Cucumis sativus]
gi|449525818|ref|XP_004169913.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Cucumis sativus]
Length = 537
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 114/348 (32%), Positives = 193/348 (55%), Gaps = 6/348 (1%)
Query: 64 RISL---PKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKE- 119
RISL P+ + +V+ +W +EG T EL ++KELRK +R++ ALEI +WM +E
Sbjct: 75 RISLMENPELGSASVLNQWENEGKNITKWELSRVVKELRKYKRFERALEIYDWMSNREER 134
Query: 120 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEEL 179
F L+ SD A ++DL++KV GI S E YF LP K Y ALL+ YA + EKAE L
Sbjct: 135 FRLTTSDAAIQLDLISKVRGIKSAEEYFLRLPNHLKDRRIYGALLNAYAKGRQREKAENL 194
Query: 180 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 239
E+++ + + L +N MMTLYM+V + EKV +V E+ ++ DI++YN+W+SSC
Sbjct: 195 LEKMRTKGFTTHPLPFNVMMTLYMNVKEYEKVESLVSEMTENSIQLDIYSYNIWLSSCGL 254
Query: 240 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 299
+ +++++ ++M D + +W + + +YI + AE L E I R
Sbjct: 255 QGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLMEKAE-ECLRRVESRIVGRDR 313
Query: 300 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 359
I Y +LI LY +GNK+++ ++W + + + Y I+S+ + +G ++ +I ++
Sbjct: 314 IPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALIRVGDVEGAEKIYEE 373
Query: 360 WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
W + S +D N +G + G T KA F +++ P +++
Sbjct: 374 W-LTVKSTYDPRIANLFIGWYVKEGNTSKAESFFDHMVEVGGKPNSST 420
>gi|15225409|ref|NP_179663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206559|sp|Q9SKU6.1|PP166_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g20710, mitochondrial; Flags: Precursor
gi|4454477|gb|AAD20924.1| hypothetical protein [Arabidopsis thaliana]
gi|51315392|gb|AAT99801.1| At2g20710 [Arabidopsis thaliana]
gi|330251965|gb|AEC07059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 490
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/352 (32%), Positives = 190/352 (53%), Gaps = 4/352 (1%)
Query: 49 TSNSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHAL 108
S D D L+ R+ R P S V+ W+ +GN SEL I+K LRK R+ HAL
Sbjct: 31 PSPLDPYDTLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHAL 90
Query: 109 EISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYA 168
+IS+WM H+ +S+ D A R+DL+ KV G+ E++FE +P+ + Y ALL+ YA
Sbjct: 91 QISDWMSEHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYA 150
Query: 169 GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIF 228
K KAE++F+ +K+ L YN M+ LY+ G+ V ++ E++ + V PDIF
Sbjct: 151 SKKVLHKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIF 210
Query: 229 TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV 288
T N + + + +++ ++KFL D G DW Y + N YI A L L
Sbjct: 211 TVNTRLHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAG-LTEKALEMLR 269
Query: 289 EAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 347
++E+ + Q++ Y+ L+ Y G K+++ ++W SL + YI ++S+ L +
Sbjct: 270 KSEQMVNAQKRKHAYEVLMSFYGAAGKKEEVYRLW-SLYKELDGFYNTGYISVISALLKM 328
Query: 348 GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 399
++EV +I+++W ++ S FDI + L+ + G+ EKA E +L+QK
Sbjct: 329 DDIEEVEKIMEEW-EAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQK 379
>gi|297832672|ref|XP_002884218.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330058|gb|EFH60477.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 491
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 120/380 (31%), Positives = 198/380 (52%), Gaps = 12/380 (3%)
Query: 21 RPNSDYECFFYSRFLSSGSSQNECLDEETSNSDGKDDLKSRIFRISLPKRSATNVIQRWV 80
RP +Y S SG + LD D L+ R+ R P S V+ W+
Sbjct: 12 RPKPNY-ILRRSFLFHSGKTTPSPLDP-------YDTLQRRVARAGDPSASIIRVLDGWL 63
Query: 81 SEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGI 140
+G+ SEL I+K LRK R+ HAL+IS+WM H+ +++ D A R+DL+ KV G+
Sbjct: 64 DQGHLVKTSELHGIIKMLRKFSRFSHALQISDWMSEHRVHEITEGDVAIRLDLIAKVGGL 123
Query: 141 HSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMT 200
E++FE +P+ + Y ALL+ YA K KAE++F+ +K+ L YN M+
Sbjct: 124 GEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKAEQVFQEMKELGFLKGCLPYNVMLN 183
Query: 201 LYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGS 260
LY+ G+ V ++ E++ V PDIFT N + + +A +++ ++KFL D+G
Sbjct: 184 LYVRTGKYTMVEKLLREMEDGTVKPDIFTVNTRLHAYSAVSDVEGMEKFLMRCEADTGLH 243
Query: 261 DDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI-TYDFLIILYAGLGNKDKID 319
DW Y + N YI A L L ++E+ + R+ Y+ L+ Y G K+++
Sbjct: 244 LDWRTYADTANGYIKAG-LTEKAIEMLRKSEQMVNPRKRKHAYEVLMSFYGAAGKKEEVY 302
Query: 320 QIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGA 379
++W SL + YI ++S+ L + ++EV +I+++W ++ S FDI + L+
Sbjct: 303 RLW-SLYKELDGFYNTGYISVISALLKMDDIEEVEKIMEEW-EAGHSLFDIRIPHLLITG 360
Query: 380 FSDVGLTEKANEFHMLLLQK 399
+ G+ EKA E +L+QK
Sbjct: 361 YCKKGMMEKAEEVVNMLVQK 380
>gi|449523946|ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 461
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 114/337 (33%), Positives = 191/337 (56%), Gaps = 6/337 (1%)
Query: 55 KDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWM 114
KD+L RI + P S T ++ +WV EG ELRHI+KELR +R+KHALEIS+WM
Sbjct: 28 KDNLYRRISPVGDPNISVTPLLDQWVLEGRLVQQDELRHIIKELRVYKRFKHALEISKWM 87
Query: 115 VTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE 174
+ F LS +D A R++L+ +V G+ E YF+ +P K + + ALL+ YA K +
Sbjct: 88 SDKRYFPLSTADIAIRMNLILRVHGLEQVEDYFDNMPSQLKRYQVHIALLNCYAHEKCVD 147
Query: 175 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 234
KA +++K+ + + L YN MM LY +G+ E++ +++E+K + V D FTY++ I
Sbjct: 148 KANAFMQKIKEMGFANSPLPYNIMMNLYHQIGEFERLDSLLKEMKERGVYYDRFTYSIRI 207
Query: 235 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 294
S+ AA + ++K +++M + DW YV N Y L++ S L ++E +
Sbjct: 208 SAYAAASDFRGIEKIMEQMESNPSIVLDWNCYVIAANAY-NKVGLIDKSISMLKKSEGLL 266
Query: 295 --TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 352
+++ ++ + LYA G KD+I +IW + K+K+ ++ +I +++S L+L +K
Sbjct: 267 ANVKKKGFAFNVYLKLYARNGKKDEIHRIWNLYK--KEKIFNKGFISMITSLLILDDIKG 324
Query: 353 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
I +W+ S +D+ N L+ A+ GL EKA
Sbjct: 325 AERIYKEWETRKLS-YDLRIPNLLVDAYCRAGLMEKA 360
>gi|225461407|ref|XP_002282230.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial [Vitis vinifera]
Length = 504
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 110/351 (31%), Positives = 191/351 (54%), Gaps = 3/351 (0%)
Query: 57 DLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVT 116
+L SRI + P S V+ +WV EG + EL I+++LR +RY ALE+SEWM +
Sbjct: 38 NLYSRISPLGTPNLSLVPVLDQWVEEGKKVRDVELHRIIRDLRSRKRYAQALEVSEWMSS 97
Query: 117 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKA 176
+ S S A ++DL+ +V G+ S E YF + K + Y ALL+ Y + +K+
Sbjct: 98 KELCPFSPSARAVQLDLIGQVRGLESAENYFNNMSAEEKIDKMYGALLNCYVRERVIDKS 157
Query: 177 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 236
+++K+ + L YN +M LY++ Q+EK+ V+ E++ + PD F+Y L I+S
Sbjct: 158 LSHLQKMKELGFASTPLPYNGLMCLYINTDQLEKIPDVLSEMQENGISPDNFSYRLCINS 217
Query: 237 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 296
A +++ ++K L+EM S DW+ Y + N YI A +N ++ ++ ++
Sbjct: 218 YGARSDLNSMEKILEEMESKSHIHIDWMTYSMVANFYIKAG--LNEKALFFLKKAETKLH 275
Query: 297 RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 356
+ + Y+ LI LYA LG+K ++ ++W+ + +K+ +R+YI +L S + LG L++ +
Sbjct: 276 KDPLGYNHLISLYASLGSKAEMMRLWERRKTASKKLINRDYITMLGSLVKLGELEDTEAL 335
Query: 357 IDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
+ +W+ S +D N LL F GL EKA ++++ PT S
Sbjct: 336 LKEWESSGNC-YDFRVPNTLLIGFCQKGLIEKAESMLRDIVEEGKTPTPNS 385
>gi|224077120|ref|XP_002305141.1| predicted protein [Populus trichocarpa]
gi|222848105|gb|EEE85652.1| predicted protein [Populus trichocarpa]
Length = 492
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 182/314 (57%), Gaps = 2/314 (0%)
Query: 76 IQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMT 135
+ WV GN+ V+EL+ I+ +LRK +R+ HAL++SEWM + S S++A ++DL+
Sbjct: 49 LDSWVRSGNKVRVAELQRIIHDLRKRKRFSHALQVSEWMHKKDICIFSPSEHAVQLDLIG 108
Query: 136 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 195
+V G S E YF L K +TY ALL+ Y + T+K+ +++K+ + ++L Y
Sbjct: 109 RVHGFVSAENYFNNLRDQDKNEKTYGALLNCYVRQRETDKSILHLQKMKEMGFAKSSLTY 168
Query: 196 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 255
N++M LY +VGQ EKV V+ E+K NV+PD F+Y L I+S A +++ ++K L+EM
Sbjct: 169 NDIMCLYTNVGQHEKVPQVLNEMKENNVLPDNFSYRLCINSFGARDDLEGMEKILNEMEH 228
Query: 256 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 315
DW Y N YI L + TL ++E + ++ Y+ LI LYA LGNK
Sbjct: 229 QPDIVMDWNTYAVAANFYIIGD-LTDKAIDTLKKSEARLDKKDGTGYNHLISLYAKLGNK 287
Query: 316 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNR 375
++ ++W + ++ +++YI ++ S L L +E +++ +W +S+ + +D+ N
Sbjct: 288 TEVLRLWDLEKSACERHINKDYIIMMESLLKLSEFEEAEKMLKEW-ESSGNFYDVRVPNT 346
Query: 376 LLGAFSDVGLTEKA 389
L+ +S GL EKA
Sbjct: 347 LIIGYSRKGLCEKA 360
>gi|356555227|ref|XP_003545936.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Glycine max]
Length = 486
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 114/335 (34%), Positives = 185/335 (55%), Gaps = 2/335 (0%)
Query: 55 KDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWM 114
K L S+I + P S V+ WV +GN+ V+EL+ I+++LRK R+ AL+ISEWM
Sbjct: 20 KPSLYSKISPLGNPNTSVVPVLDDWVFKGNKLRVAELQRIIRDLRKRSRFSQALQISEWM 79
Query: 115 VTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE 174
+ S ++YA +DL+ KV G S E YF+ L KT++TY ALL+ Y + T+
Sbjct: 80 HNKGVCIFSPTEYAVHLDLIGKVHGFSSAETYFDALKDQHKTNKTYGALLNCYVRQRQTD 139
Query: 175 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 234
KA +++K + + L YN++M LY ++GQ EKV V+ E+K+ V+PD F+Y + I
Sbjct: 140 KALSHLQKMKDLGFASSPLTYNDIMCLYTNIGQHEKVPDVLREMKQNQVLPDNFSYRICI 199
Query: 235 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 294
+S + V++ L EM DW Y N YI A L L ++E+ +
Sbjct: 200 NSYGVRSDFGGVERVLKEMETQPNIVMDWNTYSIAANFYIKAG-LTRDAVCALRKSEERL 258
Query: 295 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 354
+ Y+ LI LYA LG K+++ +IW + ++ +R++ +L S + LG L E
Sbjct: 259 DNKDGQGYNHLISLYAQLGLKNEVMRIWDLEKNACKRCINRDFTTLLESLVKLGELDEAE 318
Query: 355 EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
+I+ +W +S+ + +D + ++ +S GL EKA
Sbjct: 319 KILKEW-ESSDNCYDFGIPSIVIIGYSQKGLHEKA 352
>gi|302143027|emb|CBI20322.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 110/351 (31%), Positives = 191/351 (54%), Gaps = 3/351 (0%)
Query: 57 DLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVT 116
+L SRI + P S V+ +WV EG + EL I+++LR +RY ALE+SEWM +
Sbjct: 38 NLYSRISPLGTPNLSLVPVLDQWVEEGKKVRDVELHRIIRDLRSRKRYAQALEVSEWMSS 97
Query: 117 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKA 176
+ S S A ++DL+ +V G+ S E YF + K + Y ALL+ Y + +K+
Sbjct: 98 KELCPFSPSARAVQLDLIGQVRGLESAENYFNNMSAEEKIDKMYGALLNCYVRERVIDKS 157
Query: 177 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 236
+++K+ + L YN +M LY++ Q+EK+ V+ E++ + PD F+Y L I+S
Sbjct: 158 LSHLQKMKELGFASTPLPYNGLMCLYINTDQLEKIPDVLSEMQENGISPDNFSYRLCINS 217
Query: 237 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 296
A +++ ++K L+EM S DW+ Y + N YI A +N ++ ++ ++
Sbjct: 218 YGARSDLNSMEKILEEMESKSHIHIDWMTYSMVANFYIKAG--LNEKALFFLKKAETKLH 275
Query: 297 RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 356
+ + Y+ LI LYA LG+K ++ ++W+ + +K+ +R+YI +L S + LG L++ +
Sbjct: 276 KDPLGYNHLISLYASLGSKAEMMRLWERRKTASKKLINRDYITMLGSLVKLGELEDTEAL 335
Query: 357 IDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
+ +W+ S +D N LL F GL EKA ++++ PT S
Sbjct: 336 LKEWESSGNC-YDFRVPNTLLIGFCQKGLIEKAESMLRDIVEEGKTPTPNS 385
>gi|115436124|ref|NP_001042820.1| Os01g0301000 [Oryza sativa Japonica Group]
gi|57899052|dbj|BAD87826.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113532351|dbj|BAF04734.1| Os01g0301000 [Oryza sativa Japonica Group]
gi|215694668|dbj|BAG89859.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215706899|dbj|BAG93359.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 522
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 116/320 (36%), Positives = 187/320 (58%), Gaps = 4/320 (1%)
Query: 71 SATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATR 130
S + V+ +WV EG +A ++L +KELRK +R+ HALE+ EWMV K +S +++A R
Sbjct: 71 SVSRVMNKWVREGREARAADLAKYVKELRKYKRHAHALELMEWMVNTKGMNMSYTNHAIR 130
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSF 190
+DL+ KV GI + E+YF GLP K +TY ALL+ Y AK +KA +++ ++ + +S
Sbjct: 131 LDLIYKVRGIEAAEQYFAGLPDPGKNHKTYGALLNCYCSAKMEDKATDIYRKMDELGISS 190
Query: 191 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 250
+ L N +M+LY+ +GQ KV + EE+K KNV PD T L +SS AA ID V + L
Sbjct: 191 STLPINNLMSLYVKIGQHRKVTSLFEEMKVKNVKPDNLTCCLLMSSYAALNKIDTVGEVL 250
Query: 251 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI-TQRQWITYDFLIILY 309
EM + + W Y L ++Y+ A+ + AES+ L + E I Q +DFL+ LY
Sbjct: 251 KEME-EKKVALGWSAYSTLASLYVNANMVEEAESA-LKKLESLIDVQAGRQPFDFLMSLY 308
Query: 310 AGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD 369
A +GN +++++W ++ QK+T+ +Y+ +L + L + +I + W +S ++D
Sbjct: 309 ASVGNLSEVNRVWNLIKANFQKVTNTSYLGMLQALYKLNDDDRMKQIYEDW-ESNYENYD 367
Query: 370 ISACNRLLGAFSDVGLTEKA 389
N + A GLT++A
Sbjct: 368 ARLTNMMTRAHLRNGLTKEA 387
>gi|326493098|dbj|BAJ85010.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510377|dbj|BAJ87405.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 505
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 110/315 (34%), Positives = 178/315 (56%), Gaps = 3/315 (0%)
Query: 90 ELRHILKELRKSQRYKHALEISEWMVTHKE-FVLSDSDYATRIDLMTKVFGIHSGERYFE 148
EL I +ELRK +R+ ALE+ +WM ++ F LS SD A ++DL+ KV G+ E YFE
Sbjct: 101 ELCRIARELRKFRRFNLALEVYDWMTDRRDRFSLSSSDMAIQLDLIAKVRGVPDAEEYFE 160
Query: 149 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 208
LP K TY +LL++YA A+ EK E FE++++ + + L +N +M Y+ V +
Sbjct: 161 KLPDPLKDKRTYGSLLNVYAQARMKEKTEYTFEQMRKKGFATDTLPFNVLMNFYVDVAEP 220
Query: 209 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268
EKV+ V +E+K++N+ D+ TYN+WI CAA + D +++ L++M+ D +W Y
Sbjct: 221 EKVSTVTDEMKQRNISFDVCTYNIWIKCCAAMKDADAMERVLNQMTADESVVANWTTYTT 280
Query: 269 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 328
L +++I + AE L EAEK T R + FLI LY+ L K+++ +IW + T
Sbjct: 281 LASMHIKLENFEKAEEC-LKEAEKRATGRDKKCFHFLITLYSHLQKKEEVYRIWNWYKAT 339
Query: 329 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEK 388
+ + + Y +LS+ + LG ++ + ++W S +S FD N LL +S G K
Sbjct: 340 FKTIHNLGYQEVLSALVRLGDIEGAELLYEEW-ASKSSSFDPKTMNILLAWYSREGFVVK 398
Query: 389 ANEFHMLLLQKNCAP 403
A + ++K P
Sbjct: 399 AQQTLNRFVEKGGNP 413
>gi|224121672|ref|XP_002330624.1| predicted protein [Populus trichocarpa]
gi|222872228|gb|EEF09359.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 114/336 (33%), Positives = 188/336 (55%), Gaps = 4/336 (1%)
Query: 58 LKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTH 117
L RI + P VI++WV EG T S+L+H +++LRK R+ HAL+IS+WM
Sbjct: 35 LNRRISMVEDPMVPVIPVIEKWVQEGQVVTNSDLKHFIRKLRKIHRFSHALQISQWMSDQ 94
Query: 118 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 177
+ LS D A R+DL++KV G+ YF +P S + E Y ALL+ YA K E+AE
Sbjct: 95 RGHNLSPGDVAVRLDLISKVHGLEQAVTYFNSVPESLRGLEVYGALLNCYAHYKHLEEAE 154
Query: 178 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 237
++++ N L YN M+ LY +G+ EK+ ++++E+++ + TY + +++
Sbjct: 155 ATMRKMREMGFVRNVLSYNVMLNLYYQMGKYEKIQVLMQEMEKWGICFSNITYKILLNAY 214
Query: 238 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 297
AT NI+++KK L +M D S DW YV N Y+ A L++ + L +E+ I+ +
Sbjct: 215 VATSNIEEIKKILMKMEADPLVSIDWYAYVVAANGYLKAG-LIDKTLTMLWRSEQLISGK 273
Query: 298 QW-ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 356
+ L+ LY +GNK+++ ++W +L TK + + +Y+C+++S L L + I
Sbjct: 274 SARFACETLLSLYTAVGNKEQVYRVW-NLYKTKGRSLNSSYLCMINSLLKLDDVDGAERI 332
Query: 357 IDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
++W S FDI N ++ A+S GL EKA F
Sbjct: 333 WEEW-VSIVKFFDIRIPNVMVSAYSKKGLWEKAEAF 367
>gi|356503236|ref|XP_003520417.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Glycine max]
Length = 555
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 112/346 (32%), Positives = 191/346 (55%), Gaps = 6/346 (1%)
Query: 64 RISL---PKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKE- 119
RISL P+ + V+ +W +EG T EL ++KELRK +R+ ALE+ +WM E
Sbjct: 85 RISLNQNPQVGSAEVLNQWENEGRHLTKWELSRVVKELRKYKRFPRALEVYDWMNNRPER 144
Query: 120 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEEL 179
F +S+SD A ++DL+ KV G+ S E +F L K TY ALL++Y ++ EKAE L
Sbjct: 145 FRVSESDAAIQLDLIAKVRGVSSAEAFFLSLEDKLKDKRTYGALLNVYVHSRSKEKAESL 204
Query: 180 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 239
F+ ++ +AL N MMTLYM++ + KV ++ E+ KN+ DI+TYN+W+SSC +
Sbjct: 205 FDTMRSKGYVIHALPINVMMTLYMNLNEYAKVDMLASEMMEKNIQLDIYTYNIWLSSCGS 264
Query: 240 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 299
+++++++ ++M D +W + L ++YI + AE L + E I R
Sbjct: 265 QGSVEKMEQVFEQMERDPTIVPNWSTFSTLASMYIRMNQNEKAE-KCLRKVEGRIKGRDR 323
Query: 300 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 359
I + +L+ LY +G KD++ ++W + + ++ + Y I+SS + L ++ ++ ++
Sbjct: 324 IPFHYLLSLYGSVGKKDEVYRVWNTYKSIFPRIPNLGYHAIISSLVKLDDIEGAEKLYEE 383
Query: 360 WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 405
W S S +D N L+G + T+KA F + C P +
Sbjct: 384 WI-SVKSSYDPRIGNLLMGWYVKKDDTDKALSFFEQISNDGCIPNS 428
>gi|326531954|dbj|BAK01353.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 518
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 184/356 (51%), Gaps = 6/356 (1%)
Query: 49 TSNSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHAL 108
T+ D L R+ R+ P +A I RW E + + +L+ + +LR+++RY HAL
Sbjct: 41 TAGEREGDPLSWRLLRLRSPG-AAAAAIDRWAQERGRVSRPDLQRAVSQLRRARRYGHAL 99
Query: 109 EISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYA 168
EI WM +HKE L D+A R+DL+ KV G E Y+ LP SA LLH Y
Sbjct: 100 EILSWMDSHKEIKLLPLDHAARLDLIAKVHGTSQAEEYYNKLPNSASREAASFPLLHCYV 159
Query: 169 GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIF 228
+ +KAE ++ L + +NEMM LY++ + EKV V++ +KR N+ +
Sbjct: 160 AERNVQKAESFMASLQSIGLPVDPHSFNEMMKLYVATCEYEKVFSVIDLMKRNNIPRNAL 219
Query: 229 TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES-STL 287
+YNLW+++C+ + ++ V+ EM D W Y L NI++ H +N+++ + L
Sbjct: 220 SYNLWMNACSVS-DVTSVQSVFKEMVNDGTIEVGWSTYCTLANIFM--KHGLNSKAFACL 276
Query: 288 VEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 347
AE ++ Q + Y F++ YA LG+ D + ++W++ + ++ S NY+ + + +
Sbjct: 277 RTAETKLSTAQRLGYSFVMTCYAALGDSDGVMRLWEASKCVPGRIPSANYMSAILCLIKV 336
Query: 348 GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
G + I W + D+ N LLGA+ G EKA + H+ +L+K P
Sbjct: 337 GDIDRAEWIFGSW-EVECRKHDVRVSNVLLGAYVRNGWIEKAEKLHLHMLEKGGRP 391
>gi|255571041|ref|XP_002526471.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534146|gb|EEF35862.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 115/348 (33%), Positives = 196/348 (56%), Gaps = 6/348 (1%)
Query: 64 RISL---PKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKE- 119
RISL P+ A V+ +G + T EL ++KELRK +R+K ALE+ +WM +E
Sbjct: 74 RISLMEKPELGAATVLNEMEKDGKKLTKWELCRVVKELRKYKRHKQALEVYDWMNNREER 133
Query: 120 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEEL 179
F LS SD A ++DL+ KV G+ S E YF L + K Y ALL+ Y A+ EKAE L
Sbjct: 134 FRLSASDAAIQLDLVAKVRGVSSAEDYFMRLSDNVKDRRVYGALLNSYVKARMREKAESL 193
Query: 180 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 239
E++++ + + +AL +N MMTLYM++ + +KV +++ E+ KN+ DI++YN+W+SS +
Sbjct: 194 IEKMRKKDYTTHALPFNVMMTLYMNLKEYDKVDMMISEMMAKNIRLDIYSYNIWLSSRGS 253
Query: 240 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 299
+I+++++ ++M DS + +W + + +YI L AE L E IT R
Sbjct: 254 QGSIERMEEVYEQMKLDSTINPNWTTFSTMATMYIKMGQLEKAE-DCLRRVESRITGRDR 312
Query: 300 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 359
I Y +L+ LY +GNK++I ++W + + + Y I+SS + + ++ +I ++
Sbjct: 313 IPYHYLLSLYGNVGNKEEIYRVWNIYKSIFATIPNLGYHAIISSLVRMDDIEGAEKIYEE 372
Query: 360 WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
W S +D N L+G + G +KA F +++ P +++
Sbjct: 373 W-LPVKSSYDPRIGNLLMGWYVRGGNLDKAESFFDHMMEVGGKPNSST 419
>gi|125525544|gb|EAY73658.1| hypothetical protein OsI_01545 [Oryza sativa Indica Group]
Length = 522
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 116/320 (36%), Positives = 186/320 (58%), Gaps = 4/320 (1%)
Query: 71 SATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATR 130
S + V+ +WV EG +A ++L +KELRK +R+ HALE+ EWMV K +S +++A R
Sbjct: 71 SVSRVMNKWVREGREARAADLAKYVKELRKYKRHAHALELMEWMVNTKGMNMSYTNHAIR 130
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSF 190
+DL+ KV GI + E YF GLP K +TY ALL+ Y AK +KA +++ ++ + +S
Sbjct: 131 LDLIYKVRGIEAAELYFAGLPDPGKNHKTYGALLNCYCSAKMEDKATDIYRKMDELGISS 190
Query: 191 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 250
+ L N +M+LY+ +GQ KV + EE+K KNV PD T L +SS AA ID V + L
Sbjct: 191 STLPINNLMSLYVKIGQHRKVTSLFEEMKVKNVKPDNLTCCLLMSSYAALNKIDTVGEVL 250
Query: 251 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI-TQRQWITYDFLIILY 309
EM + + W Y L ++Y+ A+ + AES+ L + E I Q +DFL+ LY
Sbjct: 251 KEME-EKKVALGWSAYSTLASLYVNANMVEEAESA-LKKLESLIDVQAGRQPFDFLMSLY 308
Query: 310 AGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD 369
A +GN +++++W ++ QK+T+ +Y+ +L + L + +I + W +S ++D
Sbjct: 309 ASVGNLSEVNRVWNLIKANFQKVTNTSYLGMLQALYKLNDDDRMKQIYEDW-ESNYENYD 367
Query: 370 ISACNRLLGAFSDVGLTEKA 389
N + A GLT++A
Sbjct: 368 ARLTNMMTRAHLRNGLTKEA 387
>gi|326498623|dbj|BAK02297.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 505
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/315 (34%), Positives = 178/315 (56%), Gaps = 3/315 (0%)
Query: 90 ELRHILKELRKSQRYKHALEISEWMVTHKE-FVLSDSDYATRIDLMTKVFGIHSGERYFE 148
EL I +ELRK +R+ ALE+ +WM ++ F LS SD A ++DL+ KV G+ E YFE
Sbjct: 101 ELCRIARELRKFRRFNLALEVYDWMTDRRDRFSLSSSDMAIQLDLIAKVRGVPDTEEYFE 160
Query: 149 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 208
LP K TY +LL++YA A+ EK E FE++++ + + L +N +M Y+ V +
Sbjct: 161 KLPDPLKDKRTYGSLLNVYAQARMKEKTEYTFEQMRKKGFATDTLPFNVLMNFYVDVAEP 220
Query: 209 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268
EKV+ V +E+K++N+ D+ TYN+WI CAA + D +++ L++M+ D +W Y
Sbjct: 221 EKVSTVTDEMKQRNISFDVCTYNIWIKCCAAMKDADAMERVLNQMTADESVVANWTTYTT 280
Query: 269 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 328
L +++I + AE L EAEK T R + FLI LY+ L K+++ +IW + T
Sbjct: 281 LASMHIKLENFEKAEEC-LKEAEKRATGRDKKCFHFLITLYSHLQKKEEVYRIWNWYKAT 339
Query: 329 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEK 388
+ + + Y +LS+ + LG ++ + ++W S +S FD N LL +S G K
Sbjct: 340 FKTIHNLGYQEVLSALVRLGDIEGAELLYEEW-ASKSSSFDPKTMNILLAWYSREGFVVK 398
Query: 389 ANEFHMLLLQKNCAP 403
A + ++K P
Sbjct: 399 AQQTLNRFVEKGGNP 413
>gi|449458295|ref|XP_004146883.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial-like [Cucumis sativus]
gi|449518825|ref|XP_004166436.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial-like [Cucumis sativus]
Length = 474
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 114/341 (33%), Positives = 186/341 (54%), Gaps = 4/341 (1%)
Query: 50 SNSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALE 109
S ++ + L R+ + S I +++ EGN EL +KELRK +RY H L+
Sbjct: 3 SPANNQRGLYPRLSALGATGGSVAKTINQFIMEGNIVKKYELEKCIKELRKYRRYHHCLQ 62
Query: 110 ISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAG 169
I EWM T K S +DYA R+DL++KV G+ + E+YF LP SAK TY ALL+ Y
Sbjct: 63 IMEWMETRK-INYSFTDYALRLDLISKVNGVTAAEKYFYDLPPSAKNRCTYGALLNCYCK 121
Query: 170 AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFT 229
EKA LF+++ + +S +L +N +MT+YM + EKV ++ E+K++ FT
Sbjct: 122 EMMEEKALTLFKKMDELKIS-TSLSFNNLMTMYMRMDHPEKVPPLIGEMKQRGFYLTTFT 180
Query: 230 YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAE-SSTLV 288
YN+W++SCA+ +I +V++ L+EM + DW Y NL + Y+ A AE + +
Sbjct: 181 YNVWMNSCASLNDIGKVEEILEEMKMEDRNKFDWTTYSNLASFYVKAGQFEKAELALKKL 240
Query: 289 EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLG 348
E E + + Y LI LYA N ++++IW +L+ MT+ +Y+ +L + L
Sbjct: 241 EEEMKSDKNDRLVYHCLISLYASTSNLSEVNRIWNALKSVYSTMTNISYLVMLQALRKLK 300
Query: 349 HLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
++ + +W +S +FD+ N ++GA+ + E A
Sbjct: 301 DIEGLKRTYKEW-ESNCRNFDLRIVNDIIGAYLQQDMYEDA 340
>gi|356518447|ref|XP_003527890.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Glycine max]
Length = 496
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/382 (31%), Positives = 197/382 (51%), Gaps = 17/382 (4%)
Query: 32 SRFLSSG------SSQNECLDEETSNSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQ 85
SRFLS+G ++ C E S + +R F+ S K+S +Q WV +GN
Sbjct: 3 SRFLSAGIRRFVFGARTLC-SSEASRASAFPMPFARKFKFS--KQSPLPALQNWVDQGND 59
Query: 86 ATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGER 145
+ +LR I + L KS+RY HALE+ EW+ K F + +D+A +++L+ + G+ E
Sbjct: 60 VSPFQLRSIARTLVKSKRYHHALEVFEWIKNQKNFHMIPADHAMKLELIIENHGLMEAEE 119
Query: 146 YFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSV 205
YF LP SA LL Y + T KAE ++ + L + +NEMM LY+
Sbjct: 120 YFMNLPDSAAKKAACLILLRGYVRDRDTSKAETFMLKLYELGLVVSPHPFNEMMKLYLVT 179
Query: 206 GQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN--IDQVKKFLDEMSCDSGGSDDW 263
+ KV LV++++KR + ++ +YNLW+++C+ + V+ +M D W
Sbjct: 180 CEYRKVPLVIQQMKRNKIPCNVLSYNLWMNACSEEEGYVVAAVETVFRQMLNDRNVEVGW 239
Query: 264 VKYVNLVNIYITASHLVNAESSTLV--EAEKSITQRQWITYDFLIILYAGLGNKDKIDQI 321
L N Y A ++ + LV +AEK ++ + + FLI LYA L +K+ + ++
Sbjct: 240 GSLATLANAYKKAGQ---SKKAILVLKDAEKKLSTCNRLGHFFLITLYASLKDKEGVLRL 296
Query: 322 WKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFS 381
W++ + + +++ NYICIL+ + LG + + I +W +S +DI N LLGA+
Sbjct: 297 WEASKAVRGRISCANYICILTCLVKLGDIVQAKRIFLEW-ESNCQKYDIRVSNVLLGAYV 355
Query: 382 DVGLTEKANEFHMLLLQKNCAP 403
GL E+A H+ LQK P
Sbjct: 356 RNGLMEEAESLHLHTLQKGGCP 377
>gi|356510143|ref|XP_003523799.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Glycine max]
Length = 530
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 126/414 (30%), Positives = 205/414 (49%), Gaps = 23/414 (5%)
Query: 1 MAARSFFLGLRRASNTKIKNRPNSDYEC-----FFYSRFLSSGSSQNECLDEETS--NSD 53
MA R G+RR + ++ + P SDY+ F + F+ + +D S +
Sbjct: 1 MANRFISAGIRRYAQPRLLS-PLSDYQPNQLSKFCFISFVFGARTLCSSVDSRASAFHVP 59
Query: 54 GKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEW 113
LKSR K+S ++ WV EGN + SELR I + L KS+ Y HALE+ +W
Sbjct: 60 LARKLKSR-------KQSPLPALKNWVDEGNDVSHSELRRIARTLVKSKCYHHALEVVKW 112
Query: 114 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 173
+ K F + +DYA +++L+ + + + E YF LP SA LL Y + T
Sbjct: 113 IENQKNFHMIPADYAMKLELIIENYDLMEAEEYFMNLPDSAAKKAACLTLLRGYIRVRDT 172
Query: 174 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 233
KAE ++ + L + +NEMM LY++ + KV LV++++KR V ++ +YNLW
Sbjct: 173 NKAETFMVKLYELGLVLSPHPFNEMMKLYLATCEYRKVPLVMQQMKRNKVPCNVLSYNLW 232
Query: 234 ISSCAAT--LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV--E 289
+++C + V+ +M D W L N Y A ++ + LV +
Sbjct: 233 MNACTEEEGYGVAAVETVFRQMQNDRNVEVGWSSLATLANAYKKAGQ---SKKAILVLKD 289
Query: 290 AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGH 349
AE+ ++ + Y FLI LYA L K+ + ++W++ + +++ NYICIL + LG
Sbjct: 290 AERKLSTCNRLGYFFLITLYASLKEKEGVLRLWEASKAVGGRISCANYICILICLVKLGD 349
Query: 350 LKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
+ + I +W +S +DI N LLGA++ G E+A H+ LQK P
Sbjct: 350 IVQAKRIFLEW-ESNCQKYDIRVSNVLLGAYARNGSMEEAESLHLHTLQKGGCP 402
>gi|225450579|ref|XP_002277733.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial [Vitis vinifera]
gi|296089781|emb|CBI39600.3| unnamed protein product [Vitis vinifera]
Length = 498
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 110/316 (34%), Positives = 184/316 (58%), Gaps = 4/316 (1%)
Query: 75 VIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLM 134
+ +WV EG ++ + +LR+ ++YKHA +I EWM K L+++D A RIDL+
Sbjct: 52 TLDKWVKEGKSVKRFDMISCVNQLRRFKKYKHAAQIYEWMEKSKN-DLNNADRAIRIDLL 110
Query: 135 TKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALM 194
K GI E YF L SAKT++TY ALL+ Y +KA ELF+++K+ N +AL
Sbjct: 111 AKTEGIAQAENYFNSLQESAKTNKTYGALLNCYCKENMLDKAVELFKKLKELNFVSSALS 170
Query: 195 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 254
YN M++LY+ VGQ EKV +V E++ K++ D++TYNL ++S A+ + + V++ LD+M
Sbjct: 171 YNNMISLYLRVGQPEKVPSLVHEMEEKDIPADLYTYNLLMNSYASVKDFEAVEQVLDKMK 230
Query: 255 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 314
G DW Y NL NIY+ A H A + L + E++ + LI LYA N
Sbjct: 231 -KRGVERDWFTYGNLANIYVDAGHTKKA-NYALQKLEQNKNLHDPEAFRMLINLYARTSN 288
Query: 315 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 374
+ +++ W+SL++ K+ +++Y+ +L + LG + + + +W +S S +D+ N
Sbjct: 289 LEGVNRAWESLKLAHPKINNKSYLIMLLALSKLGDVAGLEKCFKEW-ESGCSTYDVRLSN 347
Query: 375 RLLGAFSDVGLTEKAN 390
+L ++ + + E+AN
Sbjct: 348 VMLESYLNREIIEEAN 363
>gi|449438086|ref|XP_004136821.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 486
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 188/350 (53%), Gaps = 4/350 (1%)
Query: 55 KDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWM 114
+D L R++R P+ S V+ +WV EG Q S+L+ ++K+LR R+ HAL++ EW
Sbjct: 35 EDTLFRRVYRAGDPRTSIVRVLDQWVEEGRQVNQSDLQKLIKQLRTFGRFNHALQLCEWE 94
Query: 115 VTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE 174
+ S A ++ L++K G+ E YF + S++ + Y ALLH Y K +
Sbjct: 95 RNERNKCPSPGHIAIQLHLISKARGLEQAEEYFSSIGESSRDHKVYGALLHCYVENKNLK 154
Query: 175 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 234
KAE + +++++ L YN M+ LY +G+ EK+ +V+E++ + + FTYN+ +
Sbjct: 155 KAEAIMQKMREVGFMKTPLSYNAMLNLYAQLGKHEKLDELVKEMEEMGIGHNRFTYNVRM 214
Query: 235 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 294
++ AA +I ++K L +M D + DW Y + N Y A L S L +AE+ I
Sbjct: 215 NAYAAASDITNMEKLLSKMEADPLVATDWHIYFTVGNGYFKAG-LSENSISMLKKAEQLI 273
Query: 295 TQRQ-WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 353
+Q W+ Y +L+ LYA +GNKD++ ++W +L QK + Y+CI+SS + L +
Sbjct: 274 GDKQKWLAYQYLMTLYAAIGNKDEVYRVW-NLYTNLQKRFNSGYLCIISSLMKLDDIDGA 332
Query: 354 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
I+ +W+ TS FD N ++ ++ G +KA + L++ P
Sbjct: 333 ERILKEWESGDTS-FDFKIPNMMINSYCTKGFVDKAEAYISRLIENGKEP 381
>gi|357137419|ref|XP_003570298.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Brachypodium distachyon]
Length = 513
Score = 190 bits (483), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 176/338 (52%), Gaps = 5/338 (1%)
Query: 68 PKRSATNV-IQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSD 126
P+ SA I+RW E + +LR + +LR+++RY HALEI WM + K+ LS D
Sbjct: 53 PRGSAVAAAIERWAQERGHVSRPDLRRAVSQLRRARRYDHALEILSWMDSRKDLNLSPLD 112
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQS 186
+A R+DL+ KV G E Y++ L +A LLH Y + +KAE ++
Sbjct: 113 HAARLDLIAKVHGTCHAEEYYKKLRNAACREAASFPLLHCYVAERNVQKAESFMASLQSI 172
Query: 187 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 246
L + +NEM+ LY++ Q EK V++ +KR N+ ++ +YNLW+++C + L + V
Sbjct: 173 GLPVDPHSFNEMLKLYVATCQFEKALAVIDLMKRSNIPRNVLSYNLWMNAC-SVLGVASV 231
Query: 247 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES-STLVEAEKSITQRQWITYDFL 305
+ EM D W + L NI+I H +N+++ + L AE ++ RQ + Y F+
Sbjct: 232 QSVFKEMVNDGTVEVGWSTFCTLANIFI--KHGLNSKALACLRTAETKLSPRQRLGYSFV 289
Query: 306 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 365
+ YA L + D + ++W++ + ++ S NY+ + + +G + + I W+
Sbjct: 290 MTCYARLDDSDGVMRLWEASKSVPGRIPSANYMSTIICSIKVGDIAQAEWIFGSWEAECG 349
Query: 366 SDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
D+ N LLGA+ G EKA H+ +L+K P
Sbjct: 350 RKNDVRVSNVLLGAYVRNGWIEKAERLHLHMLEKGAHP 387
>gi|147819856|emb|CAN71816.1| hypothetical protein VITISV_023421 [Vitis vinifera]
Length = 494
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 109/316 (34%), Positives = 184/316 (58%), Gaps = 4/316 (1%)
Query: 75 VIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLM 134
+ +WV EG ++ + +LR+ ++YKHA +I EWM K L+++D A RIDL+
Sbjct: 48 TLDKWVKEGKSVKRFDMISCVNQLRRFKKYKHAAQIYEWMEKSKN-DLNNADRAIRIDLL 106
Query: 135 TKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALM 194
K GI E YF L SAKT++TY ALL+ Y +KA ELF+++K+ N +AL
Sbjct: 107 AKTEGIAQAENYFNSLQESAKTNKTYGALLNCYCKENMVDKAVELFKKLKELNFVSSALS 166
Query: 195 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 254
YN M++LY+ VGQ EKV +V E++ K++ D++TYNL ++S A+ + + V++ L++M
Sbjct: 167 YNNMISLYLRVGQPEKVPSLVHEMEEKDIPADLYTYNLLMNSYASVKDFEAVEQVLEKMK 226
Query: 255 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 314
G DW Y NL NIY+ A H A + L + E++ + LI LYA N
Sbjct: 227 -KRGVERDWFTYGNLANIYVDAGHTKKA-NYALQKLEQNKNLHDPEAFRMLINLYARTSN 284
Query: 315 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 374
+ +++ W+SL++ K+ +++Y+ +L + LG + + + +W +S S +D+ N
Sbjct: 285 LEGVNRAWESLKLAHPKINNKSYLIMLLALSKLGDVAGLEKCFKEW-ESGCSTYDVRLSN 343
Query: 375 RLLGAFSDVGLTEKAN 390
+L ++ + + E+AN
Sbjct: 344 VMLESYLNREMIEEAN 359
>gi|125579556|gb|EAZ20702.1| hypothetical protein OsJ_36321 [Oryza sativa Japonica Group]
Length = 491
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 113/352 (32%), Positives = 184/352 (52%), Gaps = 12/352 (3%)
Query: 56 DDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMV 115
D L R+ ++ PKRSA V++RW EG +L ++ +LRK +R+KHALE
Sbjct: 28 DTLGRRLLKLIYPKRSAAVVLRRWAEEGRTVQKYQLNRVVCQLRKYRRFKHALERKLSFF 87
Query: 116 THKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEK 175
S S + G+ S E++FE +P AK T ALLH Y +K
Sbjct: 88 RGPRRCTSTS--------CQRSGGLPSAEKFFEDMPERAKGPSTCNALLHAYVQHGRRDK 139
Query: 176 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
AE + E + ++ AL +N MM+LYMS G++EKV +++E+ R+ +PD+ TYN+W++
Sbjct: 140 AEAMLEEMAKAGYLTCALPFNHMMSLYMSSGELEKVPEMIKEL-RRYTIPDLVTYNIWLT 198
Query: 236 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 295
C+ ++ +K D M D DW+ + L +IYI A V + LVE EK +
Sbjct: 199 YCSKKNSVKAAEKVYDLMK-DERVVPDWMTFSLLGSIYINAGLHVKGRDA-LVEMEKRAS 256
Query: 296 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 355
+++ Y L+ LYA L ++ +D++W+ +R T +K + Y C+L+S G + E
Sbjct: 257 RKERAAYSSLLTLYASLSDRGNLDRVWRKMRETFRKFSDTEYKCMLTSLTRFGDIAEAES 316
Query: 356 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
+W +SA+ D N +L + G+ EKA F ++QK P+ ++
Sbjct: 317 FYSEW-ESASGTRDSRIPNTILAFYIKNGMMEKAEGFLDHIVQKGVKPSYST 367
>gi|449434959|ref|XP_004135263.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Cucumis sativus]
gi|449478594|ref|XP_004155363.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g60770-like [Cucumis sativus]
Length = 489
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 112/343 (32%), Positives = 189/343 (55%), Gaps = 4/343 (1%)
Query: 61 RIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEF 120
R+F+ ++S + +++ + E+ L++LR + Y AL++SE M +
Sbjct: 30 RLFKDGGSEKSVRLQLNKFIKSHKRVFKWEVGDTLRKLRDRKLYYPALKLSEIM-AKRGM 88
Query: 121 VLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELF 180
+ SD A +DL+ K GI + E YF LP S+K +Y++LL+ Y TEKAE LF
Sbjct: 89 NKTVSDQAIHLDLVAKARGIDAAENYFVSLPESSKNHLSYSSLLNCYCKELLTEKAEALF 148
Query: 181 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 240
E++K+ NL + YN +MTLY +G+ +KV +++E+K NV D +TY +W+ + AA
Sbjct: 149 EKIKELNLPVTPVPYNSLMTLYSKIGRPDKVCTIIQEMKAANVTFDPYTYIVWMRALAAL 208
Query: 241 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI 300
+I V++ +DEM D G DW Y NL +IY+ A+ A + L + EK T+R I
Sbjct: 209 NDISGVERVIDEMKRD-GVKGDWTTYSNLASIYVNANMFEKA-AKALKDLEKINTRRDLI 266
Query: 301 TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW 360
+ FLI LY +G+ ++ ++W+SLR+ + + +Y+ ++ + L L + +W
Sbjct: 267 GFQFLITLYGQIGDLTEVYRVWRSLRLAFPRTANISYLNMIQTLTKLKDLPGAEKCFKEW 326
Query: 361 KQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
+S + +DI N L+GA++ GL EKA L++ P
Sbjct: 327 -ESGSPTYDIRIPNALIGAYTKGGLLEKAMALKERALRRGARP 368
>gi|255573975|ref|XP_002527905.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532680|gb|EEF34462.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 490
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 176/314 (56%), Gaps = 3/314 (0%)
Query: 90 ELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEG 149
E+ LK+LR Y AL++SE M + + + SD A +DL+ K GI + E +F
Sbjct: 57 EVGDTLKKLRSRGLYYPALKLSEAM-SKRGMNKTVSDQAIHLDLVAKTRGIPAAEIFFID 115
Query: 150 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 209
LP ++K TY ALL+ Y TE+AE L E++K+ NL +++ YN +MTLY +GQ E
Sbjct: 116 LPETSKNHLTYGALLNCYCNQLMTEEAEALMEKMKELNLGLSSMSYNSLMTLYTKIGQPE 175
Query: 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
++ +++E+K +++PD +TYN+W+ + AA +I ++ ++EM D + DW Y NL
Sbjct: 176 RIPGIIQEMKSDSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTYSNL 235
Query: 270 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
+IY+ A AE TL E EK R + FLI LY +GN ++ +IW+SLR+
Sbjct: 236 ASIYVDAQLFEKAE-KTLKELEKRNVHRDHSAFQFLITLYGRIGNLHELYRIWRSLRLAF 294
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
K ++ +Y+ ++ + L L + +W +S S +DI N L+ A++ GL EKA
Sbjct: 295 PKTSNISYLNMIQVLVNLKDLPGAEKCFREW-ESNCSGYDIRVANVLIKAYAKKGLLEKA 353
Query: 390 NEFHMLLLQKNCAP 403
E + + P
Sbjct: 354 EELKERAIGRGAKP 367
>gi|224121680|ref|XP_002330626.1| predicted protein [Populus trichocarpa]
gi|222872230|gb|EEF09361.1| predicted protein [Populus trichocarpa]
Length = 441
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 113/337 (33%), Positives = 189/337 (56%), Gaps = 8/337 (2%)
Query: 60 SRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKE 119
RI R PK S VI++W+ EGN S+L++ +K R+ +R+ HAL+IS+WM +
Sbjct: 8 PRISRAGNPKVSIIPVIEQWLKEGNSIKQSDLQNFIKLFRRHRRFSHALQISQWMSDERG 67
Query: 120 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEEL 179
S D+A R+DL++KV G+ E Y+ +P + ++ Y ALL+ YA + EKAE
Sbjct: 68 SEQSPGDFAVRLDLISKVHGLEQAEEYYNSIPDHLRGTQVYGALLNCYAHKRRLEKAEAT 127
Query: 180 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 239
+++++ L L YN M++LY +G+ EK+ +V+E++ K V DI+T+N+ + + A
Sbjct: 128 MQKMRELGL-VQTLSYNVMLSLYSHMGRYEKLEALVKEMEEKGVNSDIYTFNIRLHAYVA 186
Query: 240 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 299
T NI++++K L +M DS + D+ + + N Y+ A L+ L AE+
Sbjct: 187 TSNIEEMEKLLMKMETDSLINIDFHTFFAVANGYLKAG-LLEKSIVMLKRAEELTVPMVG 245
Query: 300 IT----YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 355
T Y+ L+ LY GNKD + ++W S + T + S YIC+++S + LG +
Sbjct: 246 TTKAHAYEMLLTLYGSAGNKDGVYRVWNSYKNTGRIFNS-TYICMINSLMRLGDIDGAEW 304
Query: 356 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
I ++W T +DI N ++ A+S GL +KA E+
Sbjct: 305 ISEEWVSRKTL-YDIRIPNTMIRAYSRKGLWKKAEEY 340
>gi|326502008|dbj|BAK06496.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 551
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 182/320 (56%), Gaps = 4/320 (1%)
Query: 71 SATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATR 130
S + V+ +W+ EG + +L +KELR+ +R+ ALE+ +WMV K +S +++A R
Sbjct: 100 SVSAVLNKWLREGRETRSVDLERYVKELRRYKRHSQALELMDWMVHTKGMNMSYTNHAIR 159
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSF 190
+DL+ KV G+ + E+YFEGLP AK T+ ALL+ Y +K EKA +L+ ++ + +S
Sbjct: 160 LDLIYKVRGLEAAEKYFEGLPDPAKNHRTFGALLNCYCSSKEEEKATDLYRKMDELGISS 219
Query: 191 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 250
+ L N +M+LYM +GQ +KV + EE+K KNV PD T + ++S AA ID V++ L
Sbjct: 220 STLPINNLMSLYMKLGQHKKVCSLFEEMKEKNVKPDNLTCCILMTSLAALNKIDDVEQVL 279
Query: 251 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW-ITYDFLIILY 309
EM + G W Y L +IY +A LV S L + E + R +DFL+ LY
Sbjct: 280 KEME-EKDGVLGWSAYSTLASIYQSAG-LVEKAESALKKLEGLVQDRDGRQPFDFLMSLY 337
Query: 310 AGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD 369
A +GN ++ ++W ++ T K+T+ +Y +L + L L + ++ ++W +S +D
Sbjct: 338 ASVGNLSEVKRVWGVVKATFPKVTNTSYFSMLQALLKLNDADYMKQVFEEW-ESNHEFYD 396
Query: 370 ISACNRLLGAFSDVGLTEKA 389
N + A G+ ++A
Sbjct: 397 AKLTNVMTRAHLKNGMAKEA 416
>gi|297603118|ref|NP_001053460.2| Os04g0544400 [Oryza sativa Japonica Group]
gi|255675659|dbj|BAF15374.2| Os04g0544400 [Oryza sativa Japonica Group]
Length = 571
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 105/315 (33%), Positives = 177/315 (56%), Gaps = 3/315 (0%)
Query: 90 ELRHILKELRKSQRYKHALEISEWMVTHKE-FVLSDSDYATRIDLMTKVFGIHSGERYFE 148
EL I +ELRK +R+ AL++ +WM ++ F LS SD A ++DL+ KV G+ E YFE
Sbjct: 109 ELCRIARELRKFRRFNLALQVYDWMTERRDRFSLSSSDMAIQLDLIAKVRGVSHAEEYFE 168
Query: 149 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 208
LP K TY +LL++YA A EK E FE++++ + + L +N +M Y+ +
Sbjct: 169 ELPDPLKDKRTYGSLLNVYAQAMMKEKTESTFEQMRKKGFATDTLPFNVLMNFYVDAEEA 228
Query: 209 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268
EKV+++++E+ +NV D+ TYN+WI SCAA + D +++ ++M D +W Y
Sbjct: 229 EKVSILIDEMMERNVAFDVCTYNIWIKSCAAMQDADAMEQVFNQMIRDETVVANWTTYTT 288
Query: 269 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 328
L +++I + AE S L EAEK T R+ + +L+ LY+ LG K+++ ++W + T
Sbjct: 289 LASMHIKLGNSEKAEES-LKEAEKRTTGREKKCFHYLMTLYSHLGKKEEVYRVWNWYKAT 347
Query: 329 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEK 388
+ + Y +LS+ + LG ++ + ++W S +S FD N LL ++ G K
Sbjct: 348 FPTIHNLGYQEVLSALVRLGDIEGAELLYEEW-ASKSSSFDPKTMNILLAWYAREGFVTK 406
Query: 389 ANEFHMLLLQKNCAP 403
A + ++K P
Sbjct: 407 AEQTLNRFVEKGGNP 421
>gi|297729245|ref|NP_001176986.1| Os12g0527850 [Oryza sativa Japonica Group]
gi|255670359|dbj|BAH95714.1| Os12g0527850 [Oryza sativa Japonica Group]
Length = 313
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/257 (38%), Positives = 150/257 (58%), Gaps = 3/257 (1%)
Query: 56 DDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMV 115
D L R+ ++ PKRSA V++RW EG +L +++ELRK +R+KHALEI EWM
Sbjct: 28 DTLGRRLLKLIYPKRSAAVVLRRWAEEGRTVQKYQLNRVVRELRKYRRFKHALEICEWMR 87
Query: 116 THKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEK 175
T E L D+A +DL+ KV G+ S E++FE +P AK T ALLH Y +K
Sbjct: 88 TQPEMRLLPGDHAVHLDLVAKVRGLPSAEKFFEDMPERAKGPSTCNALLHAYVQHGRRDK 147
Query: 176 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
AE + E + ++ AL +N MM+LYMS G++EKV +++E+ R+ +PD+ TYN+W++
Sbjct: 148 AEAMLEEMAKAGYLTCALPFNHMMSLYMSSGELEKVPEMIKEL-RRYTIPDLVTYNIWLT 206
Query: 236 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 295
C+ ++ +K D M D DW+ + L +IYI A V + LVE EK +
Sbjct: 207 YCSKKNSVKAAEKVYDLMK-DERVVPDWMTFSLLGSIYINAGLHVKGRDA-LVEMEKRAS 264
Query: 296 QRQWITYDFLIILYAGL 312
+++ Y L+ LYA L
Sbjct: 265 RKERAAYSSLLTLYASL 281
>gi|32488964|emb|CAE04345.1| OSJNBb0038F03.9 [Oryza sativa Japonica Group]
Length = 511
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/315 (33%), Positives = 177/315 (56%), Gaps = 3/315 (0%)
Query: 90 ELRHILKELRKSQRYKHALEISEWMVTHKE-FVLSDSDYATRIDLMTKVFGIHSGERYFE 148
EL I +ELRK +R+ AL++ +WM ++ F LS SD A ++DL+ KV G+ E YFE
Sbjct: 109 ELCRIARELRKFRRFNLALQVYDWMTERRDRFSLSSSDMAIQLDLIAKVRGVSHAEEYFE 168
Query: 149 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 208
LP K TY +LL++YA A EK E FE++++ + + L +N +M Y+ +
Sbjct: 169 ELPDPLKDKRTYGSLLNVYAQAMMKEKTESTFEQMRKKGFATDTLPFNVLMNFYVDAEEA 228
Query: 209 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268
EKV+++++E+ +NV D+ TYN+WI SCAA + D +++ ++M D +W Y
Sbjct: 229 EKVSILIDEMMERNVAFDVCTYNIWIKSCAAMQDADAMEQVFNQMIRDETVVANWTTYTT 288
Query: 269 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 328
L +++I + AE S L EAEK T R+ + +L+ LY+ LG K+++ ++W + T
Sbjct: 289 LASMHIKLGNSEKAEES-LKEAEKRTTGREKKCFHYLMTLYSHLGKKEEVYRVWNWYKAT 347
Query: 329 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEK 388
+ + Y +LS+ + LG ++ + ++W S +S FD N LL ++ G K
Sbjct: 348 FPTIHNLGYQEVLSALVRLGDIEGAELLYEEW-ASKSSSFDPKTMNILLAWYAREGFVTK 406
Query: 389 ANEFHMLLLQKNCAP 403
A + ++K P
Sbjct: 407 AEQTLNRFVEKGGNP 421
>gi|125549215|gb|EAY95037.1| hypothetical protein OsI_16851 [Oryza sativa Indica Group]
Length = 511
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/315 (33%), Positives = 177/315 (56%), Gaps = 3/315 (0%)
Query: 90 ELRHILKELRKSQRYKHALEISEWMVTHKE-FVLSDSDYATRIDLMTKVFGIHSGERYFE 148
EL I +ELRK +R+ AL++ +WM ++ F LS SD A ++DL+ KV G+ E YFE
Sbjct: 109 ELCRIARELRKFRRFNLALQVYDWMTERRDRFSLSSSDMAIQLDLIAKVRGVSHAEEYFE 168
Query: 149 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 208
LP K TY +LL++YA A EK E FE++++ + + L +N +M Y+ +
Sbjct: 169 ELPDPLKDKRTYGSLLNVYAQAMMKEKTESTFEQMRKKGFATDTLPFNVLMNFYVDAEEA 228
Query: 209 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268
EKV+++++E+ +NV D+ TYN+WI SCAA + D +++ ++M D +W Y
Sbjct: 229 EKVSILIDEMMERNVAFDVCTYNIWIKSCAAMQDADAMEQVFNQMIRDETVVANWTTYTT 288
Query: 269 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 328
L +++I + AE S L EAEK T R+ + +L+ LY+ LG K+++ ++W + T
Sbjct: 289 LASMHIKLGNSEKAEES-LKEAEKRTTGREKKCFHYLMTLYSHLGKKEEVYRVWNWYKAT 347
Query: 329 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEK 388
+ + Y +LS+ + LG ++ + ++W S +S FD N LL ++ G K
Sbjct: 348 FPTIHNLGYQEVLSALVRLGDIEGAELLYEEW-ASKSSSFDPKTMNILLAWYAREGFVTK 406
Query: 389 ANEFHMLLLQKNCAP 403
A + ++K P
Sbjct: 407 AEQTLNRFVEKGGNP 421
>gi|224119780|ref|XP_002331159.1| predicted protein [Populus trichocarpa]
gi|118487894|gb|ABK95769.1| unknown [Populus trichocarpa]
gi|222873242|gb|EEF10373.1| predicted protein [Populus trichocarpa]
Length = 490
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 177/318 (55%), Gaps = 3/318 (0%)
Query: 90 ELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEG 149
E+ +K+LR Y A+++SE M + + + SD A +DL+ K GI + E YF
Sbjct: 57 EVGDTIKKLRSRNLYYPAVKLSETM-SSRGMNKTVSDQAIHLDLVAKTRGIPAAENYFID 115
Query: 150 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 209
LP ++K TY ALL+ Y TE+AE L E++K+ NL +++ YN +MTLY VGQ E
Sbjct: 116 LPETSKNLRTYGALLNCYCKELMTEEAEALIEKMKELNLGLSSMSYNSLMTLYTKVGQPE 175
Query: 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
++ +++E+K NV+PD +TYN+W+ + AA +I V++ ++EM D + +W Y NL
Sbjct: 176 RIPAIIQEMKADNVMPDSYTYNVWMRALAAVNDISGVERVIEEMKRDGRVAANWTTYSNL 235
Query: 270 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
+IY+ A + AE + L E EK + + FLI LY G ++ +IW+SLR+
Sbjct: 236 ASIYVDAGYFDKAEKA-LKELEKINANKDLFAFQFLITLYGRTGKLIEVYRIWRSLRLAF 294
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
K + +Y+ ++ + L + + +W +S S +DI N ++ A++ GL +KA
Sbjct: 295 PKTANISYLNMIQVLVNLKDVPGAEKCFREW-ESGCSTYDIRVANVVISAYAKEGLVDKA 353
Query: 390 NEFHMLLLQKNCAPTNAS 407
E ++ P + +
Sbjct: 354 EELKERARRRGAKPNSKT 371
>gi|218195308|gb|EEC77735.1| hypothetical protein OsI_16848 [Oryza sativa Indica Group]
Length = 1300
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 105/315 (33%), Positives = 177/315 (56%), Gaps = 3/315 (0%)
Query: 90 ELRHILKELRKSQRYKHALEISEWMVTHKE-FVLSDSDYATRIDLMTKVFGIHSGERYFE 148
EL I +ELRK +R+ AL++ +WM ++ F LS SD A ++DL+ KV G+ E YFE
Sbjct: 109 ELCRIARELRKFRRFNLALQVYDWMTERRDRFSLSSSDMAIQLDLIAKVRGVSHAEEYFE 168
Query: 149 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 208
LP K TY +LL++YA A EK E FE++++ + + L +N +M Y+ +
Sbjct: 169 ELPDPLKDKRTYGSLLNVYAQAMMKEKTESTFEQMRKKGFATDTLPFNVLMNFYVDAEEA 228
Query: 209 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268
EKV+++++E+ +NV D+ TYN+WI SCAA + D +++ ++M D +W Y
Sbjct: 229 EKVSILIDEMMERNVAFDVCTYNIWIKSCAAMQDADAMEQVFNQMIRDETVVANWTTYTT 288
Query: 269 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 328
L +++I + AE S L EAEK T R+ + +L+ LY+ LG K+++ ++W + T
Sbjct: 289 LASMHIKLGNSEKAEES-LKEAEKRTTGREKKCFHYLMTLYSHLGKKEEVYRVWNWYKAT 347
Query: 329 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEK 388
+ + Y +LS+ + LG ++ + ++W S +S FD N LL ++ G K
Sbjct: 348 FPTIHNLGYQEVLSALVRLGDIEGAELLYEEW-ASKSSSFDPKTMNILLAWYAREGFVTK 406
Query: 389 ANEFHMLLLQKNCAP 403
A + ++K P
Sbjct: 407 AEQTLNRFVEKGGNP 421
>gi|297808773|ref|XP_002872270.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318107|gb|EFH48529.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 492
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 122/387 (31%), Positives = 198/387 (51%), Gaps = 18/387 (4%)
Query: 28 CFFYSRFLSSG-----SSQNECLDEETSNSDGKDDLKSRIFRISLPKRSATNVIQRWVSE 82
C +R ++G S+ +C D TS+ ++ LK I R + P+RS T+++Q +
Sbjct: 5 CVAKTRLTTTGVARLVSTLGDCSD--TSSLAHRNSLKE-ILRKNGPRRSVTSLLQERIDS 61
Query: 83 GNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHS 142
G+ +SELR I K L +S RY AL++ EWM KE S D + R++L+ K G+
Sbjct: 62 GHAVALSELRFISKRLIRSNRYDLALQMIEWMENQKEIQFSVYDISLRLELIIKTHGLKQ 121
Query: 143 GERYFEGLPLSAKT----SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEM 198
E YFE L S+ + Y LL Y K ++ E E++ +NEM
Sbjct: 122 AEEYFEKLLNSSASLRVAKSAYLPLLRSYVKKKMVKEGEVFMEKLNGLGFLVTPHPFNEM 181
Query: 199 MTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSG 258
M LY + GQ EKV +VV +K + ++ +YNLW+++C + V+ EM D
Sbjct: 182 MKLYEASGQYEKVVMVVSMMKVNKIPRNVLSYNLWMNACCQVSGVTAVETVYREMVGDKS 241
Query: 259 GSDDWVKYVNLVNIYITASHLVNAESSTLV--EAEKSITQRQWITYDFLIILYAGLGNKD 316
W L N+YI E + LV AEK + + + Y FLI LYA LG+K+
Sbjct: 242 VEVGWSSLCTLANVYIKGGF---DEKAKLVLENAEKLLNRSNRLGYFFLITLYASLGDKE 298
Query: 317 KIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRL 376
+ ++W++ ++ +++ NYIC+LSS + +G L+E + ++W ++ ++D+ N L
Sbjct: 299 GVVRLWEASKLVCGRISCANYICVLSSLVKIGDLEEAERVFNEW-EAQCFNYDVRVSNVL 357
Query: 377 LGAFSDVGLTEKANEFHMLLLQKNCAP 403
LGA+ G KA H +L++ P
Sbjct: 358 LGAYMRNGEIRKAESLHARVLERGGNP 384
>gi|357146877|ref|XP_003574143.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Brachypodium distachyon]
Length = 511
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 115/352 (32%), Positives = 190/352 (53%), Gaps = 5/352 (1%)
Query: 58 LKSRIFRISLPKRSATNVIQRWVSE-GNQATVSELRHILKELRKSQRYKHALEISEWMVT 116
L+S ++ + P I+RW + GN+ EL I+KELRK +R++ ALE+SEWM
Sbjct: 59 LQSTLWPLGHPSTLLVPEIERWADKPGNRLRPVELERIVKELRKRRRHRQALEVSEWMSA 118
Query: 117 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKA 176
D+A +DL+ +V G+ + E YF L KT + Y ALL+ Y +K+
Sbjct: 119 KGLVKFLPKDHAVHLDLIGQVHGVGAAEAYFNKLADKDKTEKPYGALLNCYTRELLVDKS 178
Query: 177 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 236
F+++K+ F++L YN +M LY ++GQ EKV V+ E+K +VPD F+Y + I+S
Sbjct: 179 LAHFQKMKELGFVFSSLPYNNLMGLYTNLGQHEKVPSVIAEMKSNGIVPDNFSYRICINS 238
Query: 237 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 296
A + ++ L+EM C+ DW Y L N YI + L + S L +AE I
Sbjct: 239 YGARADFFGMENTLEEMECEPQIVVDWNTYAVLANNYIKGN-LRDKAISALQKAEAKIDI 297
Query: 297 RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK-QKMTSRNYICILSSYLMLGHLKEVGE 355
+ TY+ L+ LY LG+K ++ ++W +L+M+ ++ +++Y +L+ L L ++E
Sbjct: 298 KDSDTYNHLMSLYGQLGDKSEVKRLW-ALQMSNCKRHINKDYTTMLAMLLKLDEIEEAEA 356
Query: 356 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
++ +W +S+ + FD N LL + L +KA L+K PT+ S
Sbjct: 357 LLKEW-ESSENAFDFHVPNVLLTGYRQKDLLDKAEALLDDFLKKGKMPTSTS 407
>gi|242076656|ref|XP_002448264.1| hypothetical protein SORBIDRAFT_06g024190 [Sorghum bicolor]
gi|241939447|gb|EES12592.1| hypothetical protein SORBIDRAFT_06g024190 [Sorghum bicolor]
Length = 515
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 104/315 (33%), Positives = 178/315 (56%), Gaps = 3/315 (0%)
Query: 90 ELRHILKELRKSQRYKHALEISEWMVTHKE-FVLSDSDYATRIDLMTKVFGIHSGERYFE 148
EL I KELRK +R+ AL++ +WM ++ F LS SD A ++DL+ KV G+ E+YF+
Sbjct: 113 ELCRIAKELRKFRRFNLALQVYDWMTERRDRFSLSSSDMAIQLDLIAKVRGVSHAEKYFD 172
Query: 149 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 208
LP + K TY +LL++YA A EK E+ FE++++ + + L N +M Y+ G+
Sbjct: 173 ELPDAMKDKRTYGSLLNVYAQAMMKEKTEDTFEQMRKKGFASDTLPCNVLMNFYVDSGEP 232
Query: 209 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268
+V +++E+K +NV D+ TYN+WI SCAA + +++++ +M D +W Y
Sbjct: 233 NEVLAIIDEMKERNVSFDVCTYNIWIKSCAAKQDAEEMERVFSQMIADESVVANWTTYTT 292
Query: 269 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 328
L ++YI + AE L +AEK T R+ + +L+ LY+ LG K+++ +IW + T
Sbjct: 293 LASMYIKLGNSEKAE-ECLKDAEKRTTGREKKCFHYLMTLYSHLGKKEEVYRIWNWYKAT 351
Query: 329 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEK 388
+ + Y +LS+ + +G ++ + ++W S +S FD N LL ++ GL K
Sbjct: 352 FPMIHNLGYQELLSALVRIGDIEGAELLYEEW-ASKSSSFDPKTMNILLAWYAKEGLITK 410
Query: 389 ANEFHMLLLQKNCAP 403
A + ++K P
Sbjct: 411 AEQTLNRFVEKGGNP 425
>gi|297743994|emb|CBI36964.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 109/345 (31%), Positives = 185/345 (53%), Gaps = 3/345 (0%)
Query: 36 SSGSSQNECLDEETSNSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHIL 95
++ + E + S S + L R+ + S + + + EG EL +
Sbjct: 63 AAATEPEEVAVQAASRSVRQPRLYHRLSALGATGGSVADTLNEHIKEGKLIAKHELSSCI 122
Query: 96 KELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAK 155
K+LRK ++++HALEI +WM K F S +DYA R+DL++K G+ + E YF L SAK
Sbjct: 123 KQLRKYRQFQHALEIMDWMENRKIF-FSYADYAVRLDLLSKTKGLATAEEYFNNLSPSAK 181
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
TY LL+ Y K EKA LFE++ + N + +L +N +M+L+M +G+ E V +V
Sbjct: 182 NLLTYGTLLNCYCKEKMEEKALALFEKMDELNFASTSLTFNNLMSLHMRLGKPEMVPPLV 241
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275
+E+K++++ PD FTYN+ + S A +I+ ++ L+E+ ++ W Y NL +Y+
Sbjct: 242 DEMKKRSISPDTFTYNILMQSYARLNDIEGAERVLEEIKRENEDKLSWTTYSNLAAVYVN 301
Query: 276 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
A AE + L + E+ + + Y FLI LYAG+ N +++++W SL+ K +
Sbjct: 302 ARLFEKAELA-LKKLEEEMGFHDRLAYHFLISLYAGINNLSEVNRVWNSLKSAFPKTNNM 360
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAF 380
+Y +L + L + + ++WK S S FD+ N + AF
Sbjct: 361 SYFIMLQALANLNDVDGLKICFEEWKSSCFS-FDVRLANVAVRAF 404
>gi|359480173|ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02370, mitochondrial-like [Vitis vinifera]
Length = 506
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 109/345 (31%), Positives = 185/345 (53%), Gaps = 3/345 (0%)
Query: 36 SSGSSQNECLDEETSNSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHIL 95
++ + E + S S + L R+ + S + + + EG EL +
Sbjct: 24 AAATEPEEVAVQAASRSVRQPRLYHRLSALGATGGSVADTLNEHIKEGKLIAKHELSSCI 83
Query: 96 KELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAK 155
K+LRK ++++HALEI +WM K F S +DYA R+DL++K G+ + E YF L SAK
Sbjct: 84 KQLRKYRQFQHALEIMDWMENRKIF-FSYADYAVRLDLLSKTKGLATAEEYFNNLSPSAK 142
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
TY LL+ Y K EKA LFE++ + N + +L +N +M+L+M +G+ E V +V
Sbjct: 143 NLLTYGTLLNCYCKEKMEEKALALFEKMDELNFASTSLTFNNLMSLHMRLGKPEMVPPLV 202
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275
+E+K++++ PD FTYN+ + S A +I+ ++ L+E+ ++ W Y NL +Y+
Sbjct: 203 DEMKKRSISPDTFTYNILMQSYARLNDIEGAERVLEEIKRENEDKLSWTTYSNLAAVYVN 262
Query: 276 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
A AE + L + E+ + + Y FLI LYAG+ N +++++W SL+ K +
Sbjct: 263 ARLFEKAELA-LKKLEEEMGFHDRLAYHFLISLYAGINNLSEVNRVWNSLKSAFPKTNNM 321
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAF 380
+Y +L + L + + ++WK S S FD+ N + AF
Sbjct: 322 SYFIMLQALANLNDVDGLKICFEEWKSSCFS-FDVRLANVAVRAF 365
>gi|357165075|ref|XP_003580262.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Brachypodium distachyon]
Length = 513
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/315 (33%), Positives = 174/315 (55%), Gaps = 3/315 (0%)
Query: 90 ELRHILKELRKSQRYKHALEISEWMVTHKE-FVLSDSDYATRIDLMTKVFGIHSGERYFE 148
EL + +ELRK +R+ AL++ +WM ++ F LS SD A ++DL+ KV G+ E YFE
Sbjct: 111 ELCRVARELRKFRRFNLALQVYDWMTERRDRFSLSSSDMAIQLDLVAKVRGVPHAEEYFE 170
Query: 149 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 208
LP K TY +LL++YA A+ EK E+ FE++++ + + L +N +M Y+ V +
Sbjct: 171 SLPDPLKDKRTYGSLLNVYAQARMKEKTEDTFEQMRKKGYASDTLPFNVLMNFYVDVEEP 230
Query: 209 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268
+KV+ V +E+K +NV D+ TYN+WI S AA + D + + ++M D +W Y
Sbjct: 231 QKVSAVTDEMKERNVSFDVCTYNIWIKSFAAMKDADGMDRVFNQMIADESVVANWTTYTT 290
Query: 269 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 328
L +++I + AE L EAEK T R + FLI LY+ L K+++ +IW + T
Sbjct: 291 LASMHIKLGNFEKAE-VCLKEAEKRTTGRDKKCFHFLITLYSYLQKKEEVYRIWNWYKAT 349
Query: 329 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEK 388
+ + Y +LS+ + LG ++ + ++W S +S FD N LL +S G K
Sbjct: 350 FSTIHNLGYQEVLSALVRLGDIEGAELLYEEW-ASKSSSFDPKTMNILLAWYSREGFVVK 408
Query: 389 ANEFHMLLLQKNCAP 403
A + ++K P
Sbjct: 409 AEQTLNRFVEKGGNP 423
>gi|293332912|ref|NP_001168310.1| hypothetical protein [Zea mays]
gi|223947377|gb|ACN27772.1| unknown [Zea mays]
gi|414586053|tpg|DAA36624.1| TPA: hypothetical protein ZEAMMB73_688721 [Zea mays]
Length = 513
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/315 (32%), Positives = 178/315 (56%), Gaps = 3/315 (0%)
Query: 90 ELRHILKELRKSQRYKHALEISEWMVTHKE-FVLSDSDYATRIDLMTKVFGIHSGERYFE 148
EL I KELRK +R+ AL++ +WM ++ F LS SD A ++DL+ KV G+ E+YF+
Sbjct: 111 ELCRIAKELRKFRRFNLALQVYDWMTERRDRFPLSSSDMAIQLDLIAKVRGVPHAEKYFD 170
Query: 149 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 208
LP + K TY +LL++YA A EK EE FE++++ + + L N +M Y+ G+
Sbjct: 171 ELPDAMKDKRTYGSLLNVYAQAMMKEKTEETFEQMRKKGFASDTLPCNVLMNFYVDSGEP 230
Query: 209 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268
++V +++E+K +NV D+ TYN+WI SCAA + +++++ +M D +W Y
Sbjct: 231 DEVLAIIDEMKERNVSFDVCTYNIWIKSCAAKQDAEEMEQVFSQMIADESVVANWTTYTT 290
Query: 269 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 328
L ++Y+ + AE L +AEK T R+ + +L+ LY+ LG K+++ +IW + T
Sbjct: 291 LASMYLKLGNSEKAEEC-LKDAEKRTTGREKKCFHYLMTLYSHLGKKEEVYRIWNWYKAT 349
Query: 329 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEK 388
+ + Y +LS+ + +G ++ + ++W + S FD N LL ++ GL K
Sbjct: 350 FPMIHNLGYQELLSALIRIGDIEGAELLYEEWASKSYS-FDPKTMNILLAWYAKEGLITK 408
Query: 389 ANEFHMLLLQKNCAP 403
A + ++K P
Sbjct: 409 AEQTVNRFVEKGGNP 423
>gi|223974825|gb|ACN31600.1| unknown [Zea mays]
Length = 515
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 181/322 (56%), Gaps = 8/322 (2%)
Query: 71 SATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATR 130
S + V+ +WV EG +L +KELRK +R+ HALE+ +WMV + +S +++A R
Sbjct: 64 SVSRVLNKWVREGGATRSDDLVKHVKELRKYKRHAHALELMDWMVNARGMNMSHTNHAIR 123
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSF 190
++L+ KV G+ + E YF LP AK TY +LL Y AK EKA L+ ++ + +
Sbjct: 124 LELIYKVRGLEAAENYFANLPDPAKNHRTYGSLLSCYCSAKMEEKATNLYRQMDELGIWS 183
Query: 191 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 250
+ L N +M+LYM + Q KV + EE+K KNV P+ T + ++S AA ID +++ L
Sbjct: 184 STLPINNLMSLYMKLDQYRKVVSLFEEMKLKNVKPNSLTCCILMTSYAALNKIDDIEELL 243
Query: 251 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT---QRQWITYDFLII 307
EM + + W Y L +IY+ A AES+ L + E I+ RQ +DFL+
Sbjct: 244 KEM-VEKDVTLGWSAYSTLASIYVNAGQFGKAESA-LKKLEGLISAHDDRQ--PFDFLLS 299
Query: 308 LYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSD 367
LYA LGN +++++W ++ K+T+ +Y+ +L + L + + +I +W +S
Sbjct: 300 LYASLGNLSEVNRVWNVIKSKFSKVTNTSYLGMLHALYKLNDIDRMKQIYMEW-ESNYET 358
Query: 368 FDISACNRLLGAFSDVGLTEKA 389
FD+ N ++ + VG+TE+A
Sbjct: 359 FDVKLTNMMIRSHLKVGMTEEA 380
>gi|449431834|ref|XP_004133705.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Cucumis sativus]
gi|449478158|ref|XP_004155237.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Cucumis sativus]
Length = 492
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/407 (29%), Positives = 215/407 (52%), Gaps = 17/407 (4%)
Query: 2 AARSFFLGLRRASNTKIKN-RPNSDYECFFYSRFLSSGSSQNECLDEETSNSDGKDDLKS 60
AA + F L R+S+ + RP +D CF R S T S + +L +
Sbjct: 3 AASAMFKILSRSSSGCTRTLRPETDAFCFVALRLYS------------TRRSCDRRNLYA 50
Query: 61 RIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEF 120
RI + P+ + V+ +W+ EG ELR I+++LR +RY+ ALE+SEWM + F
Sbjct: 51 RISPLGDPECTVVPVLNQWIEEGRNIKDFELRRIVRDLRTCRRYRQALEVSEWMCSKGLF 110
Query: 121 VLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELF 180
L+ D+A ++DL+ +V G+ S E+YF + + + Y ALL+ Y +K+
Sbjct: 111 SLTTRDFAIQLDLIGQVRGLDSAEKYFGSVSNQKEIGKLYGALLNCYVREGLIDKSLAHM 170
Query: 181 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 240
+++K+ L+ + L YN++M LY++ GQ +KV V+ E+K V+PD F+Y + ISS A
Sbjct: 171 QKMKEMGLASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICISSYGAR 230
Query: 241 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI 300
++ ++ L EM + S DW Y + +I A + + + L + E + + +
Sbjct: 231 SDVISMENVLKEMEGQTHISMDWTTYSMVAGFFIKAG-MHDKAMNYLRKCEDKVDEDA-L 288
Query: 301 TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW 360
++ LI Y LG+K+++ ++W L+ K+++ +R+YI +L S + L L+E ++ +W
Sbjct: 289 GFNHLISHYTNLGHKNEVMRLWALLKKGKKQL-NRDYITMLGSLVKLELLEEAENLVMEW 347
Query: 361 KQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
+S+ +D N +L +S GL EKA + ++ P+ S
Sbjct: 348 -ESSCQCYDFRVPNVVLIGYSQKGLIEKAEKMLRNIIVNGMIPSPNS 393
>gi|224125490|ref|XP_002329818.1| predicted protein [Populus trichocarpa]
gi|222870880|gb|EEF08011.1| predicted protein [Populus trichocarpa]
Length = 494
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/314 (32%), Positives = 177/314 (56%), Gaps = 2/314 (0%)
Query: 76 IQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMT 135
+ W+ G + V+EL+ I+ + R +R+ HAL++SEWM + S S +A ++DL+
Sbjct: 49 LDSWIQNGKKVKVAELQRIIHDFRMRKRFTHALQVSEWMNKKGICIFSPSQHAVQLDLIG 108
Query: 136 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 195
+V G S E YF L K +TY ALL+ Y + T+K+ +++K+ + ++L Y
Sbjct: 109 RVHGFVSAENYFNNLRDQDKNEKTYGALLNCYVQKRETDKSISHLQKMKEMGFAKSSLSY 168
Query: 196 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 255
N++M LY +VGQ EKV V+ E+K NV PD F+Y L ++S A +++ ++K L+EM
Sbjct: 169 NDIMCLYTNVGQHEKVPQVLNEMKENNVSPDNFSYRLCMNSYGARGDLEGMEKMLNEMEH 228
Query: 256 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 315
DW Y + YI L + +L ++E + ++ Y+ LI LYA LG K
Sbjct: 229 QPDIVVDWNSYAVAASSYIKGG-LTDKAIDSLKKSETRLDKKDGTGYNHLISLYATLGEK 287
Query: 316 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNR 375
++ ++W + T ++ +++YI I++S + L +EV +++ +W+ S +D+ N
Sbjct: 288 TEVLRLWDLEKSTCERPINKDYINIMASLVKLDEFEEVEKVLKEWEASGNF-YDVRVPNT 346
Query: 376 LLGAFSDVGLTEKA 389
L+ +S GL EKA
Sbjct: 347 LIIGYSGKGLYEKA 360
>gi|125536853|gb|EAY83341.1| hypothetical protein OsI_38557 [Oryza sativa Indica Group]
Length = 444
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/300 (34%), Positives = 165/300 (55%), Gaps = 4/300 (1%)
Query: 108 LEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLY 167
L+I EWM T E L D+A +DL+ KV G+ S E++FE +P AK T ALLH Y
Sbjct: 25 LQICEWMRTQPEMRLLPGDHAVHLDLVAKVRGLPSAEKFFEDMPERAKGPSTCNALLHAY 84
Query: 168 AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 227
+KAE + E + ++ AL +N MM+LYMS G++EKV +++E+ R+ +PD+
Sbjct: 85 VQHGRRDKAEAMLEEMAKAGYLTCALPFNHMMSLYMSSGELEKVPEMIKEL-RRYTIPDL 143
Query: 228 FTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTL 287
TYN+W++ C+ ++ +K D M D DW+ + L +IYI A V + L
Sbjct: 144 VTYNIWLTYCSKKNSVKAAEKVYDLMK-DERVVPDWMTFSLLGSIYINAGLHVKGRDA-L 201
Query: 288 VEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 347
VE EK ++++ Y L+ LYA L ++ +D++W+ +R T +K + Y C+L+S
Sbjct: 202 VEMEKRASRKERAAYSSLLTLYASLSDRGNLDRVWRKMRETFRKFSDTEYKCMLTSLTRF 261
Query: 348 GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
G + E +W +SA+ D N +L + G+ EKA F ++QK P+ ++
Sbjct: 262 GDIAEAESFYSEW-ESASGTRDSRIPNTILAFYIKNGMMEKAEGFLDHIVQKGVKPSYST 320
>gi|326530906|dbj|BAK01251.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 511
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 122/408 (29%), Positives = 203/408 (49%), Gaps = 10/408 (2%)
Query: 2 AARSFFLGLRRASNTKIKNRPNSDYECFFYSRFLSSGSSQNECLDEETSNSDGKDDLKSR 61
AAR L R + + RP + R SS S + + G L+S
Sbjct: 8 AARRRLLHFGRGRLLQGRVRPQNPTPLLLPVRAASSPHSNSA--ERPPRRPPG---LQST 62
Query: 62 IFRISLPKRSATNVIQRWVSE-GNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEF 120
++ + P I+RW + GN+ EL I+KELRK +R++ ALE+SEWM
Sbjct: 63 LWPLGHPDTLLVPEIERWADKPGNRLRPVELERIVKELRKRRRHRQALEVSEWMSAKGHV 122
Query: 121 VLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELF 180
DYA +DL+ +V GI + E YF LP KT + Y ALL+ Y + + F
Sbjct: 123 RFLPKDYAVHLDLIGQVHGIGAAEAYFNTLPDKDKTEKPYGALLNCYTRELMVDGSLAHF 182
Query: 181 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 240
+++K+ F++L YN +M LY ++GQ EKV V+ E+K ++PD F+Y + I+S
Sbjct: 183 QKMKELGFVFSSLPYNNLMGLYTNIGQHEKVPSVIAEMKGSGIMPDNFSYRICINSYGTR 242
Query: 241 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI 300
+ ++ L++M C+ DW Y + + YI + L S L +AE I +
Sbjct: 243 ADFFGMENTLEDMECEPQIVVDWNTYAVVASNYIKGN-LREKAISALKKAEAKIDIKDSD 301
Query: 301 TYDFLIILYAGLGNKDKIDQIWKSLRMTK-QKMTSRNYICILSSYLMLGHLKEVGEIIDQ 359
TY+ LI LY LG+K ++ ++W L+M+ ++ +++Y +L+ + L ++E ++ +
Sbjct: 302 TYNHLISLYGQLGDKSEMRRLW-GLQMSNCKRHINKDYTTMLAMLVRLDEIEEAEALLKE 360
Query: 360 WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
W +S+ + FD N LL + + +KA L+K P + S
Sbjct: 361 W-ESSENAFDFHVPNVLLTGYRHKDMLDKAEALLDDFLKKGKMPPSTS 407
>gi|242057165|ref|XP_002457728.1| hypothetical protein SORBIDRAFT_03g012450 [Sorghum bicolor]
gi|241929703|gb|EES02848.1| hypothetical protein SORBIDRAFT_03g012450 [Sorghum bicolor]
Length = 530
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 111/324 (34%), Positives = 178/324 (54%), Gaps = 12/324 (3%)
Query: 71 SATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATR 130
S + V+ +WV EG EL +KELRK +R+ HALE+ +WMV + +S +++A R
Sbjct: 80 SVSRVLNKWVREGGAPRSEELVKHVKELRKYKRHAHALEVMDWMVNARGMNMSITNHAIR 139
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSF 190
+DL+ KV G+ + E YF LP AK TY ALL Y AK EKA L+ ++ +
Sbjct: 140 LDLIYKVRGLEAAENYFANLPDPAKNHRTYGALLSCYCSAKMEEKATYLYRQMDELGFWS 199
Query: 191 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 250
L N +M+LYM + Q KV + EE+K KN+ PD T + ++S AA+ ID +++ L
Sbjct: 200 GTLPINNLMSLYMKLDQHRKVDSLFEEMKVKNIKPDSLTCCILMTSYAASNKIDAIEELL 259
Query: 251 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESS-----TLVEAEKSITQRQWITYDFL 305
EM + S W Y L +IY+ A + AES+ L+ AE RQ +DFL
Sbjct: 260 KEM-VEKDVSLGWSAYSTLASIYVNAGQVEKAESALKKLEGLIGAEDG---RQ--PFDFL 313
Query: 306 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 365
+ LYA LGN +I+++W ++ +T+ +Y+ +L + L + + +I +W +S
Sbjct: 314 MSLYASLGNLSEINRVWDVIKAKFSTVTNISYLGMLHALYKLNDIDRMKQIYMEW-ESNY 372
Query: 366 SDFDISACNRLLGAFSDVGLTEKA 389
+D+ N ++ +G++E+A
Sbjct: 373 QTYDVRLTNMMIRGHLRLGMSEEA 396
>gi|395146485|gb|AFN53641.1| pentatricopeptide repeat-containing protein [Linum usitatissimum]
Length = 516
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 111/370 (30%), Positives = 191/370 (51%), Gaps = 6/370 (1%)
Query: 36 SSGSSQNECLDEETSNSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHIL 95
+S S+ + E+ S S L R+ + + V+ +V +G EL +
Sbjct: 25 ASASAPDPSYKEQRS-SGNPLRLYRRLSALGATGGTVDKVLNDYVMDGMSIRKVELMRCV 83
Query: 96 KELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAK 155
KELRK R+ H LEI EWM + L D A R+DL+ K GI E YF GL SAK
Sbjct: 84 KELRKYGRFNHGLEIMEWM-EKRGINLGHGDLAVRLDLICKTKGITEAENYFNGLVPSAK 142
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
TY +LL+ Y +EKA +LF+++ + N+L +N +M++YM +GQ EKV +V
Sbjct: 143 NPATYGSLLNSYCKKLDSEKALQLFQKMDKLKFFRNSLPFNNLMSMYMRLGQQEKVPELV 202
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS--GGSDDWVKYVNLVNIY 273
++K+ N+ P FTYN+WI S + + +KK L+EM D G + +W Y NL +Y
Sbjct: 203 SQMKQMNLPPCTFTYNIWIQSLGHMRDFEGIKKVLEEMRNDVNFGNNFNWTTYSNLAAVY 262
Query: 274 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
+A A+ + L E+ I Y FL+ LY G+ + +++ ++W L+ ++T
Sbjct: 263 TSAGEFERAKLA-LKMMEERIDSHDRNAYHFLLTLYGGIADLEEVHRVWGCLKAKFNQVT 321
Query: 334 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 393
+ +Y+ +L + L ++ + ++ ++W+ TS +D+ N + + + G+ +A
Sbjct: 322 NASYLVMLQALARLKDVEGISKVFEEWESVCTS-YDMRVANVAIRVYLEKGMYNEAEAVF 380
Query: 394 MLLLQKNCAP 403
+++ P
Sbjct: 381 DGAMERTPGP 390
>gi|255553771|ref|XP_002517926.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542908|gb|EEF44444.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 180/338 (53%), Gaps = 4/338 (1%)
Query: 56 DDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMV 115
D L RI + P S ++++W+ EGN EL+ +K+LRK +R+ HAL++SEWM
Sbjct: 39 DTLYGRISKAGKPSISIVPILEKWLEEGNDVKKPELQKFVKQLRKYRRFTHALQVSEWMT 98
Query: 116 THKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEK 175
K L D A R+DL++KV G+ E YF +P +++ + Y ALL+ A +K K
Sbjct: 99 DKKGCSLLPGDVAVRLDLISKVHGLVKAEEYFNSIPDTSRDRQVYGALLNCCAHSKLLGK 158
Query: 176 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
AE +++K N+L YN M++LY +G EK+ +V+E++ + D TY + ++
Sbjct: 159 AEATMQKMKDLGFVKNSLSYNVMLSLYSHMGNYEKLDPLVQEMEENGISCDRITYCIRLN 218
Query: 236 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 295
+C + +I+ ++K L +M D S + YV N Y+ A LV+ L +E+ I+
Sbjct: 219 ACVNSSDIEGMEKLLMKMEVDPNISVGFHAYVIAANGYLKAG-LVDKTLIMLKRSEQLIS 277
Query: 296 -QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 354
+ Y+FL+ LY GNK ++ +IW + + S YIC++SS L L +
Sbjct: 278 GNTRRFAYEFLLTLYTASGNKAEVYRIWNKYKEIGRFFNS-GYICMISSLLKLDDIDGAE 336
Query: 355 EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
I ++W S FDI N ++ +S G EKA +
Sbjct: 337 RIFEEW-DSKKVLFDIRIPNSMVNVYSRKGHLEKAETY 373
>gi|22329290|ref|NP_171717.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806400|sp|Q8LPS6.2|PPR3_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g02150
gi|2317908|gb|AAC24372.1| Unknown protein [Arabidopsis thaliana]
gi|332189272|gb|AEE27393.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 524
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 187/348 (53%), Gaps = 6/348 (1%)
Query: 64 RISL---PKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKE- 119
+ISL P+ A +V+ +W G + T EL ++KELRK +R ALE+ +WM E
Sbjct: 72 KISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNRGER 131
Query: 120 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEEL 179
F LS SD A ++DL+ KV GI E +F LP + K Y +LL+ Y AK EKAE L
Sbjct: 132 FRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKAEAL 191
Query: 180 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 239
++ + + L +N MMTLYM++ + +KV +V E+K+K++ DI++YN+W+SSC +
Sbjct: 192 LNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCGS 251
Query: 240 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 299
++++++ +M D +W + + +YI AE + L + E IT R
Sbjct: 252 LGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDA-LRKVEARITGRNR 310
Query: 300 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 359
I Y +L+ LY LGNK ++ ++W + + + Y ++SS + +G ++ ++ ++
Sbjct: 311 IPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEE 370
Query: 360 WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
W S +D N L+ A+ E A +++ P++++
Sbjct: 371 W-LPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSST 417
>gi|297848282|ref|XP_002892022.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337864|gb|EFH68281.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 523
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 188/348 (54%), Gaps = 6/348 (1%)
Query: 64 RISL---PKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKE- 119
+ISL P+ A +V+ +W G + T EL ++KELRK +R ALE+ +WM E
Sbjct: 71 KISLMEKPELGAASVLNQWEKGGRKLTKWELCRVVKELRKYKRPNQALEVYDWMNNRGER 130
Query: 120 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEEL 179
F LS SD A ++DL+ KV GI E++F LP + K Y +LL+ Y AK EKAE L
Sbjct: 131 FRLSASDAAIQLDLIGKVRGISDAEQFFLTLPENFKDRRVYGSLLNAYVRAKSREKAEAL 190
Query: 180 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 239
++ + + L +N MMTLYM++ + +KV +V E+K+K++ DI++YN+W+SSC +
Sbjct: 191 LHTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCGS 250
Query: 240 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 299
++++++ +M D + +W + + +YI AE + L + E IT R
Sbjct: 251 LGSVEKMELVYQQMKSDVSINPNWTTFSTMATMYIKMGETEKAEDA-LRKVEARITGRNR 309
Query: 300 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 359
I Y +L+ LY +GNK ++ ++W + + + Y ++SS +G ++ ++ ++
Sbjct: 310 IPYHYLLSLYGSVGNKKELYRVWNVYKSVVPSIPNLGYHALVSSLARMGDIEGAEKVYEE 369
Query: 360 WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
W S +D N L+ + EKA +++ P++++
Sbjct: 370 W-LPVKSSYDPRIPNLLMNVYVKNDQLEKAEGLFDHMVEMGGKPSSST 416
>gi|255548417|ref|XP_002515265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545745|gb|EEF47249.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 109/322 (33%), Positives = 176/322 (54%), Gaps = 7/322 (2%)
Query: 71 SATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATR 130
S + + + EG T EL ++ELRK +R+ HA EI EWM K S +D A R
Sbjct: 53 SVSRTLNEHIMEGKTITKIELSRCIRELRKYRRFDHAFEIMEWMEKRK-MNFSYADRAIR 111
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKTSET-YTALLHLYAGAKWTEKAEELFERVKQSNLS 189
+DL+ K GI + E YF GL SAK T Y ALL+ Y ++KA LF+ + +
Sbjct: 112 LDLIGKARGIAAAEDYFNGLSPSAKNHHTSYGALLNCYCKELMSDKALALFQEMDEKKFL 171
Query: 190 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 249
+++L +N +M++YM +GQ EKV +V+E+K++ V P FTYN+W+ S + V +
Sbjct: 172 YSSLPFNNLMSMYMRLGQPEKVPPLVDEMKKRKVSPCSFTYNIWMQSYGCLNDFQGVDRV 231
Query: 250 LDEMSCDSGGSDD--WVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLII 307
L E+ D GG D+ W Y NL IY+ A AES+ L + E + R Y FLI
Sbjct: 232 LREIVND-GGKDNLQWTTYSNLATIYLKAGIFEKAESA-LKKLEAIMGFRNREAYHFLIS 289
Query: 308 LYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSD 367
+YAG GN ++++++W L+ + + + +Y+ +L + L ++ V + +W +S ++
Sbjct: 290 IYAGTGNSNEVNRVWGLLKSSFNMINNLSYLVMLQALAKLKDVEGVAKCFREW-ESGCTN 348
Query: 368 FDISACNRLLGAFSDVGLTEKA 389
+D+ N + F + E+A
Sbjct: 349 YDMRIANVAIRVFLQHDMYEEA 370
>gi|20453085|gb|AAM19786.1| At1g02150/T7I23.8 [Arabidopsis thaliana]
gi|29028736|gb|AAO64747.1| At1g02150/T7I23.8 [Arabidopsis thaliana]
Length = 524
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 187/348 (53%), Gaps = 6/348 (1%)
Query: 64 RISL---PKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKE- 119
+ISL P+ A +V+ +W G + T EL ++KELRK +R A+E+ +WM E
Sbjct: 72 KISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQAIEVYDWMNNRGER 131
Query: 120 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEEL 179
F LS SD A ++DL+ KV GI E +F LP + K Y +LL+ Y AK EKAE L
Sbjct: 132 FRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKAEAL 191
Query: 180 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 239
++ + + L +N MMTLYM++ + +KV +V E+K+K++ DI++YN+W+SSC +
Sbjct: 192 LNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCGS 251
Query: 240 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 299
++++++ +M D +W + + +YI AE + L + E IT R
Sbjct: 252 LGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDA-LRKVEARITGRNR 310
Query: 300 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 359
I Y +L+ LY LGNK ++ ++W + + + Y ++SS + +G ++ ++ ++
Sbjct: 311 IPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEE 370
Query: 360 WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
W S +D N L+ A+ E A +++ P++++
Sbjct: 371 W-LPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSST 417
>gi|22328859|ref|NP_680735.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75146702|sp|Q84JR3.1|PP334_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g21705, mitochondrial; Flags: Precursor
gi|28393142|gb|AAO42004.1| unknown protein [Arabidopsis thaliana]
gi|28827500|gb|AAO50594.1| unknown protein [Arabidopsis thaliana]
gi|332659092|gb|AEE84492.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 492
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/358 (30%), Positives = 188/358 (52%), Gaps = 2/358 (0%)
Query: 50 SNSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALE 109
+N K L S+I + PK S +Q WV G + +V+EL I+ +LR+ +R+ HALE
Sbjct: 19 TNRVKKTTLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRKRFLHALE 78
Query: 110 ISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAG 169
+S+WM V S +++A +DL+ +V+G + E YFE L K +TY ALL+ Y
Sbjct: 79 VSKWMNETGVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGALLNCYVR 138
Query: 170 AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFT 229
+ EK+ FE++K+ ++L YN +M LY ++GQ EKV V+EE+K +NV PD ++
Sbjct: 139 QQNVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPDNYS 198
Query: 230 YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVE 289
Y + I++ A +++++ L +M + DW Y YI A L
Sbjct: 199 YRICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRA-VELLKM 257
Query: 290 AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGH 349
+E + ++ Y+ LI LYA LG K ++ ++W + ++ +++Y+ +L S + +
Sbjct: 258 SENRLEKKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLVKIDA 317
Query: 350 LKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
L E E++ +WK S +D N ++ + + EKA L ++ A T S
Sbjct: 318 LVEAEEVLTEWKSSGNC-YDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTPES 374
>gi|115457716|ref|NP_001052458.1| Os04g0320200 [Oryza sativa Japonica Group]
gi|32490390|emb|CAE04700.1| OSJNBa0041M06.2 [Oryza sativa Japonica Group]
gi|38344779|emb|CAE01505.2| OSJNBb0026L04.10 [Oryza sativa Japonica Group]
gi|113564029|dbj|BAF14372.1| Os04g0320200 [Oryza sativa Japonica Group]
gi|125543501|gb|EAY89640.1| hypothetical protein OsI_11170 [Oryza sativa Indica Group]
gi|125589896|gb|EAZ30246.1| hypothetical protein OsJ_14297 [Oryza sativa Japonica Group]
gi|215767374|dbj|BAG99602.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 524
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/304 (34%), Positives = 170/304 (55%), Gaps = 2/304 (0%)
Query: 58 LKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTH 117
L R+FR ++ + ++ +A E+ ++ LRK Y+ AL++SE M
Sbjct: 21 LYRRLFRRGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRRLRKQALYRPALKLSEVM-AR 79
Query: 118 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 177
+ + SD A R+DL+ K GI + E+YF LP ++KT TY ALL+ Y TEKAE
Sbjct: 80 RGMNPTVSDQAIRLDLVAKSRGIAAAEKYFLDLPETSKTHLTYGALLNCYCKDLMTEKAE 139
Query: 178 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 237
L ++K+ N +F A+ YN +MTLY V Q EKV V++++K +V+PDI+TYN+W+ +
Sbjct: 140 ALMGKMKELNFAFTAMCYNSLMTLYTKVNQHEKVPSVIQDMKADDVLPDIYTYNVWMRAL 199
Query: 238 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 297
AA ++I V++ ++EM D + DW Y NL +IY+ A AE++ L E EK T
Sbjct: 200 AARVDIKGVERVIEEMKRDGRVTPDWTTYSNLASIYVDAGLFEKAEAA-LKELEKWNTSN 258
Query: 298 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 357
Y FLI LYA N ++ ++W+SL+ + + + +Y+ ++ + L L
Sbjct: 259 DLEAYQFLITLYARTQNLVEVHRVWRSLKRNQPRRANMSYLNMIQALANLKDLPGAEACF 318
Query: 358 DQWK 361
+W+
Sbjct: 319 KEWE 322
>gi|115473169|ref|NP_001060183.1| Os07g0598500 [Oryza sativa Japonica Group]
gi|34393591|dbj|BAC83218.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113611719|dbj|BAF22097.1| Os07g0598500 [Oryza sativa Japonica Group]
gi|215706491|dbj|BAG93347.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 186/352 (52%), Gaps = 5/352 (1%)
Query: 58 LKSRIFRISLPKRSATNVIQRWVSE-GNQATVSELRHILKELRKSQRYKHALEISEWMVT 116
L+S ++ + P I+RW ++ GN+ EL I+KELRK +R++ ALE+SEWM
Sbjct: 65 LQSTLWPLGHPGTLLVPEIERWAAKPGNRLRHVELERIVKELRKRRRHRQALEVSEWMNA 124
Query: 117 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKA 176
D+A +DL+ ++ G + E YF LP KT + Y ALL+ Y EK+
Sbjct: 125 KGHVKFLPKDHAVHLDLIGEIHGSSAAETYFNNLPDKDKTEKPYGALLNCYTRELLVEKS 184
Query: 177 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 236
F+++K+ F+ L YN +M LY ++GQ EKV V+ E+K +VPD F+Y + I+S
Sbjct: 185 LAHFQKMKELGFVFSTLPYNNIMGLYTNLGQHEKVPSVIAEMKSNGIVPDNFSYRICINS 244
Query: 237 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 296
+ ++ L+EM C+ DW Y + + YI + + S L +AE I
Sbjct: 245 YGTRADFFGMENTLEEMECEPKIVVDWNTYAVVASNYIKGN-IREKAFSALKKAEAKINI 303
Query: 297 RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK-QKMTSRNYICILSSYLMLGHLKEVGE 355
+ +Y+ LI LY LG+K +++++W +L+M+ + +++Y +L+ + L ++E
Sbjct: 304 KDSDSYNHLISLYGHLGDKSEVNRLW-ALQMSNCNRHINKDYTTMLAVLVKLNEIEEAEV 362
Query: 356 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
++ +W+ S + FD N LL + L +KA L+K P + S
Sbjct: 363 LLKEWESSGNA-FDFQVPNVLLTGYRQKDLLDKAEALLDDFLKKGKMPPSTS 413
>gi|116309055|emb|CAH66166.1| H0107B07.5 [Oryza sativa Indica Group]
Length = 524
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/304 (34%), Positives = 170/304 (55%), Gaps = 2/304 (0%)
Query: 58 LKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTH 117
L R+FR ++ + ++ +A E+ ++ LRK Y+ AL++SE M
Sbjct: 21 LYRRLFRRGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRRLRKQALYRPALKLSEVM-AR 79
Query: 118 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 177
+ + SD A R+DL+ K GI + E+YF LP ++KT TY ALL+ Y TEKAE
Sbjct: 80 RGMNPTVSDQAIRLDLVAKSRGIAAAEKYFLDLPETSKTHLTYGALLNCYCKDLMTEKAE 139
Query: 178 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 237
L ++K+ N +F A+ YN +MTLY V Q EKV V++++K +V+PDI+TYN+W+ +
Sbjct: 140 ALMGKMKELNFAFTAMCYNSLMTLYTKVNQHEKVPSVIQDMKADDVLPDIYTYNVWMRAL 199
Query: 238 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 297
AA ++I V++ ++EM D + DW Y NL +IY+ A AE++ L E EK T
Sbjct: 200 AARVDIKGVERVIEEMKRDGRVTPDWTTYSNLASIYVDAGLFEKAEAA-LKELEKWNTSN 258
Query: 298 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 357
Y FLI LYA N ++ ++W+SL+ + + + +Y+ ++ + L L
Sbjct: 259 DLEAYQFLITLYARTQNLVEVHRVWRSLKRNQPRRANMSYLNMIQALANLKDLPGAEACF 318
Query: 358 DQWK 361
+W+
Sbjct: 319 KEWE 322
>gi|242034057|ref|XP_002464423.1| hypothetical protein SORBIDRAFT_01g017970 [Sorghum bicolor]
gi|241918277|gb|EER91421.1| hypothetical protein SORBIDRAFT_01g017970 [Sorghum bicolor]
Length = 496
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 183/351 (52%), Gaps = 3/351 (0%)
Query: 58 LKSRIFRISLPKRSATNVIQRWVSEG-NQATVSELRHILKELRKSQRYKHALEISEWMVT 116
L+S ++ + P I+ W + N+ EL+ I++ELRK R++ ALE+SEWM
Sbjct: 46 LQSTLWPLGHPCTLLVPEIELWAARPRNRLRAVELQRIVRELRKRHRHRQALEVSEWMNL 105
Query: 117 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKA 176
D+A +DL+ +V G+ + E YF L KT + Y ALL+ Y +KA
Sbjct: 106 KGHVKFLPKDHAIHLDLIGQVHGVGAAETYFNNLSDKDKTEKPYGALLNCYTRELLVDKA 165
Query: 177 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 236
F+ +K+ F+AL YN +M LY ++GQ E+V +V+ E+KR +VPD F+Y + I+S
Sbjct: 166 LAHFQNMKELGFVFSALSYNNLMGLYTNIGQHERVPMVMAEMKRDGIVPDNFSYRICINS 225
Query: 237 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 296
+ ++ L+EM C+ DW Y + + YI +L S L +AE + +
Sbjct: 226 YGIRADFFGLENTLEEMECEPQIVVDWNTYAVVASNYIKG-YLREKAYSALRKAEAKMDK 284
Query: 297 RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 356
+ Y LI LY LG+K ++ ++W + ++ +++Y +L+ + L + E ++
Sbjct: 285 KDGDAYGHLISLYGHLGDKLEVKRLWALHMLNCKRYINKDYTNMLAVLVKLDEITEAEDL 344
Query: 357 IDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
+ +W +S+ + FD N LL + GL +KA L+K PT+ S
Sbjct: 345 LKEW-ESSKNAFDFQVPNVLLTGYRQKGLLDKAETLLDGFLKKGKTPTSTS 394
>gi|356526773|ref|XP_003531991.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Glycine max]
Length = 490
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 170/314 (54%), Gaps = 3/314 (0%)
Query: 90 ELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEG 149
E+ LK+LR + Y+ AL++SE M + + + SD+A +DL+ K GI + E YF
Sbjct: 57 EVGDTLKKLRDRKLYQPALKLSETM-AKRNMIKTVSDHAIHLDLLAKARGITAAENYFVS 115
Query: 150 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 209
LP +K Y ALL+ Y TEK+E L E++K+ +L +++ YN +MTLY VGQ E
Sbjct: 116 LPEPSKNHLCYGALLNCYCKELMTEKSEGLMEKMKELSLPLSSMPYNSLMTLYTKVGQPE 175
Query: 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
K+ +++E+K NV+ D +TYN+W+ + AA +I V++ DEM + DW Y NL
Sbjct: 176 KIPSLIQEMKASNVMLDSYTYNVWMRALAAVNDISGVERVHDEMKRGGQVTGDWTTYSNL 235
Query: 270 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
+I++ A AE + L E EK + Y FLI LY GN ++ ++W+SLR+
Sbjct: 236 ASIFVDAGLFDKAEVA-LKELEKRNAFKDLTAYQFLITLYGRTGNLYEVYRVWRSLRLAF 294
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
K + +Y+ ++ + L L + +W + +DI N L+ A+ + + EKA
Sbjct: 295 PKTANISYLNMIQVLVNLKDLPGAEKCFREW-ECGCPTYDIRVANVLIRAYVKLDMLEKA 353
Query: 390 NEFHMLLLQKNCAP 403
E ++ P
Sbjct: 354 EELKERARRRGAKP 367
>gi|224138178|ref|XP_002322749.1| predicted protein [Populus trichocarpa]
gi|222867379|gb|EEF04510.1| predicted protein [Populus trichocarpa]
Length = 505
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 109/339 (32%), Positives = 182/339 (53%), Gaps = 3/339 (0%)
Query: 52 SDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEIS 111
+D + L +RI ++ + + + + WV EG ++LR +KELR +RY HALEIS
Sbjct: 55 TDAMNVLYNRISSLADQRITISLFLNHWVLEGQPVNKNQLREFIKELRFHKRYAHALEIS 114
Query: 112 EWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAK 171
WM F L+ D A ++DL++KV GI ++ F P K + Y+ALL+ YA AK
Sbjct: 115 TWMTDSGYFELASQDVAVQLDLISKVHGIEQAQKLFNNTPQHLKVLKVYSALLNCYAKAK 174
Query: 172 WTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYN 231
EKAE + + +K + L+YN ++ Y G +K+ +++E+++ + D F ++
Sbjct: 175 LVEKAESVVQEMKSLGFANTLLVYNVILNFYYQTGNPDKINSLMQEMEQNGIGCDKFAHS 234
Query: 232 LWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE 291
+ +S+ A+ +I ++K L +M D DW Y YI LV+ L ++E
Sbjct: 235 IQLSAYASVSDIVGIEKTLAKMESDPNVFLDWTSYTAAAKGYIKVG-LVDKALEMLEKSE 293
Query: 292 KSIT-QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 350
+ +T +R+ YD LI LYA G +++ +IW+ L +K+ YI I++S L L
Sbjct: 294 RLVTGKRRGTAYDSLITLYAATGKTNEVLRIWE-LYKKNEKVYKEAYISIITSLLKLDDF 352
Query: 351 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
+ +I ++W+ S +DI N L+ A+S GL EKA
Sbjct: 353 ENAEKIFEEWEFQNHSCYDIHIPNFLIDAYSRKGLVEKA 391
>gi|293336604|ref|NP_001168600.1| uncharacterized protein LOC100382384 [Zea mays]
gi|223949449|gb|ACN28808.1| unknown [Zea mays]
Length = 536
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 100/304 (32%), Positives = 169/304 (55%), Gaps = 2/304 (0%)
Query: 58 LKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTH 117
L R+FR ++ + ++ +A E+ ++ +R++ Y+ +L++SE M
Sbjct: 21 LYRRLFRKGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRRMRRNALYRPSLKLSEVMA-R 79
Query: 118 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 177
+ + SD A R+DL+ K GI + E+YF LP ++KT TY ALL+ Y TEKAE
Sbjct: 80 RGMNPTVSDQAIRLDLIAKSRGIAAAEKYFLDLPETSKTHLTYGALLNSYCKELMTEKAE 139
Query: 178 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 237
L E++K+ N +F A+ +N +MT+Y V Q EKV +++++K +V+PD+FTYN+W+ +
Sbjct: 140 SLMEKMKELNFAFTAMSFNSLMTMYTKVNQAEKVPSIIQDMKADDVLPDVFTYNVWMRAL 199
Query: 238 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 297
AA +I V++ ++EM D + DW Y NL +IY+ A AE++ L E EK T
Sbjct: 200 AALKDIPGVERVIEEMKRDGRVAPDWTTYSNLASIYVEAGMFEKAEAA-LKELEKRNTSN 258
Query: 298 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 357
Y FLI LY N ++ ++W+SL+ +M + +Y+ ++ L L
Sbjct: 259 DIEAYQFLITLYGRTQNLVEVHRVWRSLKRDNPRMANMSYLNMIQVLANLKDLSAAEACF 318
Query: 358 DQWK 361
+W+
Sbjct: 319 KEWE 322
>gi|413953408|gb|AFW86057.1| hypothetical protein ZEAMMB73_674343 [Zea mays]
Length = 596
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 100/304 (32%), Positives = 169/304 (55%), Gaps = 2/304 (0%)
Query: 58 LKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTH 117
L R+FR ++ + ++ +A E+ ++ +R++ Y+ +L++SE M
Sbjct: 81 LYRRLFRKGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRRMRRNALYRPSLKLSEVMA-R 139
Query: 118 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 177
+ + SD A R+DL+ K GI + E+YF LP ++KT TY ALL+ Y TEKAE
Sbjct: 140 RGMNPTVSDQAIRLDLIAKSRGIAAAEKYFLDLPETSKTHLTYGALLNSYCKELMTEKAE 199
Query: 178 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 237
L E++K+ N +F A+ +N +MT+Y V Q EKV +++++K +V+PD+FTYN+W+ +
Sbjct: 200 SLMEKMKELNFAFTAMSFNSLMTMYTKVNQAEKVPSIIQDMKADDVLPDVFTYNVWMRAL 259
Query: 238 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 297
AA +I V++ ++EM D + DW Y NL +IY+ A AE++ L E EK T
Sbjct: 260 AALKDIPGVERVIEEMKRDGRVAPDWTTYSNLASIYVEAGMFEKAEAA-LKELEKRNTSN 318
Query: 298 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 357
Y FLI LY N ++ ++W+SL+ +M + +Y+ ++ L L
Sbjct: 319 DIEAYQFLITLYGRTQNLVEVHRVWRSLKRDNPRMANMSYLNMIQVLANLKDLSAAEACF 378
Query: 358 DQWK 361
+W+
Sbjct: 379 KEWE 382
>gi|297799892|ref|XP_002867830.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313666|gb|EFH44089.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 492
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 185/340 (54%), Gaps = 2/340 (0%)
Query: 50 SNSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALE 109
+N K L S+I + PK S +Q WV G + +V+EL I+ +LR+ +R+ HALE
Sbjct: 19 TNRVKKTTLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRKRFLHALE 78
Query: 110 ISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAG 169
+S+WM V S +++A +DL+ +V+G + E YFE L K +TY ALL+ Y
Sbjct: 79 VSKWMNETGVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNEKTYGALLNCYVR 138
Query: 170 AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFT 229
+ EK+ F+++K+ ++L YN +M LY ++GQ EKV V++E+K +NV PD ++
Sbjct: 139 QQNVEKSLLHFQKMKEMGFVSSSLTYNNIMCLYTNIGQHEKVPGVLDEMKEENVAPDNYS 198
Query: 230 YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVE 289
+ + I++ A +++++ L +M + DW Y YI A L
Sbjct: 199 FRICINAFGAMSDLERIGGILRDMERRPDFTMDWNTYAVAAKFYIDGGDCDRA-VELLKM 257
Query: 290 AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGH 349
+E + ++ Y+ LI LYA LGNK ++ ++W+ + ++ +++Y+ +L S + +
Sbjct: 258 SEYRLEKKDGEGYNHLITLYARLGNKIEVLRLWELEKEACKRRINQDYLTVLQSLMKIDG 317
Query: 350 LKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
LKE ++ +W+ S +D N ++ ++ + EKA
Sbjct: 318 LKEAEVVLTEWESSGNC-YDFRVPNTVIRGYTGKSMEEKA 356
>gi|357110627|ref|XP_003557118.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Brachypodium distachyon]
Length = 536
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 101/304 (33%), Positives = 165/304 (54%), Gaps = 2/304 (0%)
Query: 58 LKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTH 117
L R+FR ++ + ++ +A E+ ++ LR+ + Y+ AL+++E M
Sbjct: 21 LYRRLFRRGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRRLRRQELYRPALKLTEVMA-R 79
Query: 118 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 177
+ + D A R+DL+ K GI + E+YF LP ++KT TY ALL+ Y TEKAE
Sbjct: 80 RGMNPTVGDQAIRLDLVAKSRGIAAAEKYFMDLPETSKTHLTYGALLNCYCKESMTEKAE 139
Query: 178 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 237
L E++K+ N +F A+ YN +MTLY V Q EKV +++++K +V+PD++TYN+W+ S
Sbjct: 140 ALMEKMKELNFAFTAMSYNSLMTLYTKVNQPEKVPSIIQDMKADDVLPDVYTYNVWMRSL 199
Query: 238 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 297
AA +I V++ ++EM D DW Y NL +IY+ A AE++ L E EK T
Sbjct: 200 AARQDISGVERVIEEMKRDGRVVPDWTTYSNLASIYVEAGLFEKAEAA-LKELEKRNTSN 258
Query: 298 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 357
Y FLI LY N ++ +W+SL+ + + +Y+ ++ L L
Sbjct: 259 DLEAYQFLITLYGRTQNLVEVHHVWRSLKRNNPRKANMSYLNMIQVLANLKDLPAAEACF 318
Query: 358 DQWK 361
+W+
Sbjct: 319 KEWE 322
>gi|449438486|ref|XP_004137019.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
gi|449479168|ref|XP_004155524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 500
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 174/333 (52%), Gaps = 4/333 (1%)
Query: 58 LKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTH 117
L+ +I I PK S V+++WV +G EL++++ ++ S+R+ HALEIS+WM
Sbjct: 38 LRQKIVNIRAPKISVVPVLEKWVGDGRAIGKPELQYLVHLMKDSRRFNHALEISQWMTDR 97
Query: 118 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 177
+ LS SD A R+DL+ V G+ E YF + + KTS Y ALL Y K EKAE
Sbjct: 98 RYLSLSPSDAAVRLDLIHSVHGLEHAENYFNSISIRLKTSNVYGALLGCYVREKSLEKAE 157
Query: 178 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 237
+ + +++ ++ + YN ++ LY +GQ +K+ L++EE+K K + DI++ ++
Sbjct: 158 AIMQEMRKMGIATTSFAYNVLINLYAQIGQHDKIDLLIEEMKTKGIPQDIYSIRNLCAAY 217
Query: 238 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 297
A +I ++K L + DS DW Y N Y+TA A S EK
Sbjct: 218 VAKADISGMEKILKRIEEDSELKADWTIYSIAANGYLTAGLETEALSMLKKTEEKVRPNT 277
Query: 298 QWITYDFLIILYAGLGNKDKIDQIWKSLR-MTKQKMTSRNYICILSSYLMLGHLKEVGEI 356
+ FL+ LY G+K+++ ++W + + +TK+ T Y +++S L ++ I
Sbjct: 278 NKFAFKFLLSLYERTGHKNEVYRVWNTFKPLTKE--TCVPYALMITSLAKLDDIEGAERI 335
Query: 357 IDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
+W+ T +D NRLL A+ GL +KA
Sbjct: 336 FQEWESKCTV-YDFRVLNRLLVAYCRKGLLDKA 367
>gi|297843032|ref|XP_002889397.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335239|gb|EFH65656.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 524
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 190/348 (54%), Gaps = 4/348 (1%)
Query: 57 DLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVT 116
+L ++ ++S+ + + +++ EG +L K+LRK +R++HALEI +WM
Sbjct: 59 ELYKKLSKLSVAGGTVAETLNQFIMEGITVRKVDLFRCAKDLRKFRRHQHALEIFDWMEK 118
Query: 117 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE-TYTALLHLYAGAKWTEK 175
K S SD+A R+DL+ K G+ + E YF L SAK + TY AL++ Y K
Sbjct: 119 RK-MTFSVSDHAIRLDLIAKAKGLEAAENYFNNLDPSAKNHQSTYGALMNCYCVELEEGK 177
Query: 176 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
A+ FE++ + N N+L +N MM++YM + Q EKV ++V+ +K++ + P TY++W+
Sbjct: 178 AKAHFEKMDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAMKQRGISPCGVTYSIWMQ 237
Query: 236 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 295
SC + ++D ++K +DEM DS W + NL I+ A AES+ L EK +
Sbjct: 238 SCGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIFTKAGLYEKAESA-LKSMEKKMN 296
Query: 296 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 355
++ FLI LYAG+ ++ ++W+SL+ + ++ + +Y+ +L + LG + + +
Sbjct: 297 PNNRDSHHFLISLYAGISKGTEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDIDGIKK 356
Query: 356 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
I +W +S +D+ N + + + E+A + ++K+ P
Sbjct: 357 IFTEW-ESKCWAYDMRLANIAINTYLKGNMYEEAEKILDGAMEKSKGP 403
>gi|226502666|ref|NP_001140872.1| uncharacterized protein LOC100272948 [Zea mays]
gi|194701536|gb|ACF84852.1| unknown [Zea mays]
gi|413924212|gb|AFW64144.1| hypothetical protein ZEAMMB73_253479 [Zea mays]
Length = 525
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 166/336 (49%), Gaps = 2/336 (0%)
Query: 68 PKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDY 127
P +A ++RW + + ELR + LR+ +RY+ ALEI WM + LS D+
Sbjct: 66 PAGTAAAAVERWAQDRVHVSQPELRRAIGMLRRERRYEQALEIFSWMESCSSLRLSSWDH 125
Query: 128 ATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN 187
A R+DL+ K + E Y+ L A LLH Y + +KAE +++
Sbjct: 126 AARLDLIAKAYSTSQAEEYYNKLQSPATRQAASFPLLHCYVMERDVQKAETFMAQLQSHG 185
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 247
L + +NE+M LY++ Q EKV V++ +KR N+ ++ +YNLW+++CA +D V+
Sbjct: 186 LPVDPHSFNEIMKLYVATCQYEKVLSVIDLMKRNNIHRNVLSYNLWMNACAEVSGVDSVQ 245
Query: 248 KFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLII 307
M D W Y L NI+ + L N + LV+AE ++ + Y F++
Sbjct: 246 SVFQVMLNDETVKVGWSTYCTLANIF-RKNGLNNEAQACLVKAEAKLSPAGRLGYSFVMT 304
Query: 308 LYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSD 367
YA L + D + ++W++ + ++ + Y+ +S + +G + + I +W ++
Sbjct: 305 CYAALNDSDGVMRMWEASKSVPGRIPTAYYMAAMSCSIKVGDISQAECIFGKW-EAGCRK 363
Query: 368 FDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
D+ N LLGA+ EKA H+ +L+K P
Sbjct: 364 HDVRVSNVLLGAYVRNRWIEKAERLHLHMLEKGACP 399
>gi|356514762|ref|XP_003526072.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Glycine max]
Length = 492
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/343 (33%), Positives = 179/343 (52%), Gaps = 8/343 (2%)
Query: 49 TSNSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHAL 108
T+ + + +L SRI + P S V+ W+ EGN L HI+K LR R AL
Sbjct: 25 TAATTNRRNLYSRISPLGDPSISVVPVLDEWIEEGNAVDGPHLHHIIKILRTRNRNTQAL 84
Query: 109 EISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYA 168
E+SEWM + K +S D A ++DL+ +V G+ S ERY + L KT + + ALL+ Y
Sbjct: 85 EVSEWM-SSKGLPISSRDQAVQLDLIGRVHGVESAERYLQSLSDGDKTWKVHGALLNCYV 143
Query: 169 GAKWTEKAEELFERVKQSN-LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 227
+K+ L +++K +SF L YN +M+LY Q EKV V+E++K+ V P+I
Sbjct: 144 REGLVDKSLSLMQKMKDMGFVSF--LNYNNIMSLYTQTQQYEKVPGVLEQMKKDGVPPNI 201
Query: 228 FTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTL 287
F+Y + I+S ++ V+K L+EM + DW+ Y + N YI A A L
Sbjct: 202 FSYRICINSYCVRGDLANVEKLLEEMEREPHIGIDWITYSMVTNFYIKADMREKA-LVCL 260
Query: 288 VEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 347
++ EK + + Y+ LI A L +K + + WK + +K +R YI +L + L
Sbjct: 261 MKCEKKTHRGNTVAYNHLISHNAALRSKGGMMRAWKLQKANCKKQLNREYITMLGCLVKL 320
Query: 348 GHLKEVGEIIDQWKQSA-TSDFDISACNRLLGAFSDVGLTEKA 389
G L + +++ +W+ S T DF + N LL + GL EKA
Sbjct: 321 GELDKAEKVLGEWELSGNTCDFRVP--NILLIGYCQRGLVEKA 361
>gi|343172214|gb|AEL98811.1| pentatricopeptide repeat-containing protein, partial [Silene
latifolia]
Length = 359
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 165/300 (55%), Gaps = 3/300 (1%)
Query: 104 YKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTAL 163
Y AL++S+ M K ++ SD A +DL+ K G+ + E YF LP S+K E Y AL
Sbjct: 1 YYAALKLSDTM-AWKGMNMTISDQAIHLDLIGKTHGVAAAENYFIDLPESSKNIECYGAL 59
Query: 164 LHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNV 223
L++Y +KAE L E++K+ L A+ YN +MTLY G EKV +V+E+K ++
Sbjct: 60 LNIYCKELIPDKAEALMEKMKELGLPITAMSYNSLMTLYSKTGLPEKVPALVQEMKASDI 119
Query: 224 VPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAE 283
+ +TYN+W+ + AA +I V++ LDEM D ++DW Y NL +IY+ + AE
Sbjct: 120 MLQTYTYNVWMRALAAVKDIYGVERVLDEMKRDGRVAEDWTTYSNLASIYVESKMFEKAE 179
Query: 284 SSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSS 343
++ L E EK T + Y FL+ LY GN ++ ++W+SLR+ K + Y+ ++
Sbjct: 180 NA-LKELEKRNTSQDLSPYQFLLTLYGKTGNLIEVYRVWRSLRLAFPKTPNVAYLNMIQR 238
Query: 344 YLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
+ L LK + W+ S T ++DI N L+GA+ GL ++A E ++ P
Sbjct: 239 LVTLKDLKGAEKCFADWESSCT-NYDIRIANVLMGAYIKDGLLQQAKELKKRACKRGAKP 297
>gi|242066836|ref|XP_002454707.1| hypothetical protein SORBIDRAFT_04g035970 [Sorghum bicolor]
gi|241934538|gb|EES07683.1| hypothetical protein SORBIDRAFT_04g035970 [Sorghum bicolor]
Length = 527
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 165/336 (49%), Gaps = 2/336 (0%)
Query: 68 PKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDY 127
P+ +A I RW E + ELR + LR+++RY+HALEI WM + +LS D+
Sbjct: 68 PRGAAAAAIDRWARESVHISQPELRRAIAMLRRARRYEHALEIFSWMESCNSVLLSSWDH 127
Query: 128 ATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN 187
A R+DL+ K +G E Y+ L A LLH Y + +KAE +++
Sbjct: 128 AARLDLIAKAYGTSQAEEYYNKLQSPAARQAASFPLLHCYVTERNVQKAETFMAQLQSCG 187
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 247
L + +NE+M LY++ Q EK V++ +KR N+ ++ +YNLW++ CA + V+
Sbjct: 188 LPVDPHSFNEIMKLYIATFQYEKALSVIDLMKRNNIPRNVLSYNLWMNVCAEVSGVAPVQ 247
Query: 248 KFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLII 307
EM D W Y L NI+ + L + L +AE ++ + Y F++
Sbjct: 248 SVFQEMLNDETVEVGWSTYCTLANIF-RKNGLNTKAQACLRKAETKLSPTGRLGYSFVMT 306
Query: 308 LYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSD 367
YA L + D + ++W++ + ++ + NY+ + + +G + + I W ++
Sbjct: 307 CYAALNDSDGVMRLWEASKSVPGRIPAANYMTAMLCSIKVGDISQAEWIFGSW-EAGCRK 365
Query: 368 FDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
D+ N LLGA+ EKA H+ +L+K P
Sbjct: 366 HDVRVSNVLLGAYVRNRWIEKAERLHLHMLEKGARP 401
>gi|343172216|gb|AEL98812.1| pentatricopeptide repeat-containing protein, partial [Silene
latifolia]
Length = 359
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 103/300 (34%), Positives = 165/300 (55%), Gaps = 3/300 (1%)
Query: 104 YKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTAL 163
Y AL++S+ M K ++ +D A +DL+ K G+ + E YF LP S+K E Y AL
Sbjct: 1 YYAALKLSDTM-AWKGMNMTINDQAIHLDLIGKTHGVAAAENYFIDLPESSKNIECYGAL 59
Query: 164 LHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNV 223
L++Y +KAE L E++K+ L A+ YN +MTLY G EKV +V+E+K ++
Sbjct: 60 LNIYCKELIPDKAEALMEKMKELGLPITAMSYNSLMTLYSKTGLPEKVPALVQEMKASDI 119
Query: 224 VPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAE 283
+ +TYN+W+ + AA +I V++ LDEM D ++DW Y NL +IY+ + AE
Sbjct: 120 MLQTYTYNVWMRALAAVKDIYGVERVLDEMKRDGRVAEDWTTYSNLASIYVESKMFDKAE 179
Query: 284 SSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSS 343
++ L E EK T R+ Y FL+ LY GN ++ ++W+SLR+ K + Y+ ++
Sbjct: 180 NA-LKELEKRNTSRELSPYQFLLTLYGKTGNLIEVYRLWRSLRLAFPKTPNVAYLNMIQR 238
Query: 344 YLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
+ L LK + W+ S T ++DI N L+GA+ G ++A E ++ P
Sbjct: 239 LVTLKDLKGAEKCFADWESSCT-NYDIRIANVLMGAYIKDGSLQQAKELKKRACKRGAKP 297
>gi|224064562|ref|XP_002301516.1| predicted protein [Populus trichocarpa]
gi|222843242|gb|EEE80789.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 116/376 (30%), Positives = 185/376 (49%), Gaps = 38/376 (10%)
Query: 61 RIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEF 120
R+ + S + + + EG + + L +K+LRK R+ HA+E+ EWM K
Sbjct: 4 RLSELGASGGSVSKTLNELILEGGKTSKINLTTCIKKLRKYGRFDHAIEVMEWMQKRK-M 62
Query: 121 VLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELF 180
S D+A +DL K GI + E YF+ LP S + TY+ LL+ Y +EKA LF
Sbjct: 63 NFSHVDHAVYLDLTAKTKGIAAAENYFDNLPPSVQNHVTYSTLLNCYCKELMSEKALTLF 122
Query: 181 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 240
E++ + L ++ +N +MTL+M +GQ EKV +V+E+K++ V P FTYN+W+ S
Sbjct: 123 EKMDKMKLLSTSMPFNNLMTLHMRLGQPEKVLGIVQEMKQRGVSPGTFTYNIWMQSYGCL 182
Query: 241 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI------ 294
+ + V++ LDEM D + W Y NL IY+ A AES+ L + E+ I
Sbjct: 183 NDFEGVQRVLDEMKTDGKENFSWTTYSNLATIYVKAGLFDKAESA-LRKLEEQIECGRDC 241
Query: 295 ---------TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYL 345
R+ Y FLI LYAG N ++ ++W SL+ + + T+ +Y+ +L +
Sbjct: 242 DFQKKRRHDADRE--AYHFLISLYAGTSNLSEVHRVWNSLKSSFRTTTNISYLNVLQALA 299
Query: 346 MLGHLKEVGEIIDQWKQSATSDFDISACNRLLGA-------------FSDV-----GLTE 387
L ++ + + +W+ S S +D+ N + A F + GL
Sbjct: 300 KLKDVEGILKCFKEWESSCHS-YDMGLANVAIRACLEHDMYEEAASIFDEALKRTKGLFF 358
Query: 388 KANEFHMLLLQKNCAP 403
KA E M+ KN P
Sbjct: 359 KAREMFMVFFLKNHQP 374
>gi|224130976|ref|XP_002320971.1| predicted protein [Populus trichocarpa]
gi|222861744|gb|EEE99286.1| predicted protein [Populus trichocarpa]
Length = 473
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 176/332 (53%), Gaps = 6/332 (1%)
Query: 58 LKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTH 117
L R+ + S + + +V EG + +L ++ELRK R+ +A+E+ EWM
Sbjct: 15 LYKRLSELGASGESVSKTLNDFVLEGGKTNKVDLLACIRELRKYGRFDYAIEVMEWMQKR 74
Query: 118 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 177
K V +A +DL+ K GI + E YF+GL S + T+ ALL Y +EKA
Sbjct: 75 KMNV----SHAVYLDLIAKKEGIAAAENYFDGLSPSEQNHSTHGALLSCYCRELMSEKAL 130
Query: 178 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 237
LFE++ + +L +N +++L++ + Q EKV +V+E+K+K V P FTYN+W+ S
Sbjct: 131 TLFEKMDKMKFLLTSLPFNNLISLHLRLDQPEKVLPIVQEMKQKGVSPCTFTYNMWMQSY 190
Query: 238 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 297
+ + V++ LDEM D + W Y NL IY+ A H AES+ L + E+ I +
Sbjct: 191 GCLNDFEGVERVLDEMKMDGQKNFSWTTYTNLATIYVKAGHFDKAESA-LKKVEEQIERD 249
Query: 298 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 357
Y FLI LYAG N +++++W SL+ T+ +Y+ +L + L ++ + +
Sbjct: 250 YREAYHFLITLYAGTSNLGEVNRVWNSLKSNFHTTTNVSYLTMLHTLAKLKDVEGLLKCF 309
Query: 358 DQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
+W+ S S +D+ N + A + + E+A
Sbjct: 310 KEWESSCHS-YDMRLANVAIRACLEHDMYEEA 340
>gi|297809953|ref|XP_002872860.1| hypothetical protein ARALYDRAFT_490379 [Arabidopsis lyrata subsp.
lyrata]
gi|297318697|gb|EFH49119.1| hypothetical protein ARALYDRAFT_490379 [Arabidopsis lyrata subsp.
lyrata]
Length = 500
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/315 (33%), Positives = 165/315 (52%), Gaps = 3/315 (0%)
Query: 75 VIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLM 134
+ + V EG EL K+LRK ++ + ALEI EWM KE V + SD+A R+DL+
Sbjct: 57 TLNQLVMEGVPVKKHELIRYAKDLRKFRQPQRALEIFEWM-ERKEIVFTGSDHAIRLDLI 115
Query: 135 TKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALM 194
K G+ + E YF L S K TY +LL+ Y K +KA+ FE + N N+L
Sbjct: 116 AKTKGLEAAETYFNSLNDSIKNQSTYGSLLNCYCVEKEEDKAKAHFENMVDLNHVSNSLP 175
Query: 195 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 254
+N +M +Y+ +GQ EKV +V +K+KN+ P TY++WI SC + ++D V+K LDEM
Sbjct: 176 FNNLMAMYLRIGQSEKVPALVVAMKQKNITPCDITYSMWIQSCGSLKDLDGVEKVLDEMK 235
Query: 255 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 314
+ G W + NL IYI AE + L E + Y FLI LYAG+ N
Sbjct: 236 AEGEGISSWDTFANLAAIYIKVGLYDKAEEA-LKSLENKMNPHIRDCYHFLISLYAGIAN 294
Query: 315 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 374
++ ++W L+ + + +Y+ +L + L + + +I +W +S +D+ N
Sbjct: 295 ASEVYRVWDLLKKRHPNVNNSSYLTMLQALSKLNDIDGIKKIFTEW-ESTCWTYDMRMAN 353
Query: 375 RLLGAFSDVGLTEKA 389
+ ++ + E+A
Sbjct: 354 VAISSYLKQNMYEEA 368
>gi|115449217|ref|NP_001048388.1| Os02g0796400 [Oryza sativa Japonica Group]
gi|47497029|dbj|BAD19082.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47497238|dbj|BAD19283.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537919|dbj|BAF10302.1| Os02g0796400 [Oryza sativa Japonica Group]
gi|125584008|gb|EAZ24939.1| hypothetical protein OsJ_08720 [Oryza sativa Japonica Group]
Length = 517
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 188/388 (48%), Gaps = 15/388 (3%)
Query: 20 NRPNSDYECFFYSRFLSSGSSQNECLDEETSNSDGKDDLKSRIFRISLPKRSA----TNV 75
+RPN C S + ++ E + DG D L + RI P++S
Sbjct: 18 SRPNPRPFCCSSSSSSAPPATARE-------DGDGGDLLSRCLLRI--PRKSGRAAAAAA 68
Query: 76 IQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMT 135
++RW E + + ELR + LR+++RY+ ALEI WM +H +F LS SD+ R+DL+
Sbjct: 69 VERWARERGRVSPPELRRDVVRLRRARRYEQALEILSWMDSHNDFRLSPSDHMVRLDLIA 128
Query: 136 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 195
KV G E Y+ L +A LLH Y + +KAE +++ L + +
Sbjct: 129 KVHGTSQAEEYYRKLSTAASKKAASFPLLHCYVTERNVQKAETFMAELQRYGLPVDPHSF 188
Query: 196 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 255
NE+M LY++ Q EKV V+ +KR N+ ++ +YN+W+++CA + V+ EM
Sbjct: 189 NEIMKLYVATCQYEKVLSVIYLMKRNNIPRNVLSYNIWMNACAEVSGLASVQSAFKEMLN 248
Query: 256 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 315
D W Y L NI+ A + L AE ++ + Y F++ YA L ++
Sbjct: 249 DDMVEVGWSTYCTLANIFKKYGQSSKA-LACLRTAETKLSSTGRLGYSFIMTCYAALNDR 307
Query: 316 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNR 375
D + ++W++ ++ ++ + NY+ + + +G + W ++ + D+ N
Sbjct: 308 DGVIRLWEASKIVPGRIPAANYMSAMVCLIKVGDIGRAEWTFGSW-EAESKKHDVRVSNV 366
Query: 376 LLGAFSDVGLTEKANEFHMLLLQKNCAP 403
LLGA+ G EKA H+ +L+K P
Sbjct: 367 LLGAYVRNGWIEKAERLHLHMLEKGAHP 394
>gi|293331503|ref|NP_001168643.1| uncharacterized protein LOC100382430 [Zea mays]
gi|223949857|gb|ACN29012.1| unknown [Zea mays]
gi|413933913|gb|AFW68464.1| hypothetical protein ZEAMMB73_255812 [Zea mays]
Length = 500
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 173/351 (49%), Gaps = 3/351 (0%)
Query: 58 LKSRIFRISLPKRSATNVIQRWVSEG-NQATVSELRHILKELRKSQRYKHALEISEWMVT 116
L S +F + P I+ W + N EL+ I+KELRK +R++ ALE+SEWM
Sbjct: 48 LDSTLFPLGHPSTLLVPEIELWAARPRNLLRAVELQRIVKELRKRRRHRQALEVSEWMSL 107
Query: 117 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKA 176
D+A +DL+ ++ G+ + E YF L KT + Y ALL+ Y +KA
Sbjct: 108 KGHVKFLPKDHAIHLDLIGQIHGVEAAETYFNNLSDKDKTEKPYGALLNCYTRELLVDKA 167
Query: 177 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 236
F +K+ F+ L YN++M LY +GQ E+V V+ E+K +VPD F+Y + I+S
Sbjct: 168 LAHFRNMKELGFVFSTLPYNDLMGLYTRIGQHERVPSVMAEMKSNGIVPDNFSYRICINS 227
Query: 237 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 296
+ ++ L+EM C+ DW Y + + YI L S L +AE + +
Sbjct: 228 YGTRADFFGLENTLEEMECEPQIVVDWNTYAVVASNYIKGD-LREKAYSALSKAEAKLDK 286
Query: 297 RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 356
+ Y LI LY LG+K + ++W ++ +R+Y+ +LS + L + E ++
Sbjct: 287 QDPDAYRHLISLYGNLGDKSEAKRLWAVQMSNCKRYINRDYMNMLSVLVKLDEITEAEDL 346
Query: 357 IDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
+ +W+ S S FD N LL + L +KA L+K P + S
Sbjct: 347 LKEWESSQNS-FDFRVPNVLLTGYRQKALLDKAEMLLDGFLKKGKTPPSTS 396
>gi|125591164|gb|EAZ31514.1| hypothetical protein OsJ_15655 [Oryza sativa Japonica Group]
Length = 531
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 165/298 (55%), Gaps = 3/298 (1%)
Query: 107 ALEISEWMVTHKE-FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLH 165
A ++ +WM ++ F LS SD A ++DL+ KV G+ E YFE LP K TY +LL+
Sbjct: 146 AKDVYDWMTERRDRFSLSSSDMAIQLDLIAKVRGVSHAEEYFEELPDPLKDKRTYGSLLN 205
Query: 166 LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVP 225
+YA A EK E FE++++ + + L +N +M Y+ + EKV+++++E+ +NV
Sbjct: 206 VYAQAMMKEKTESTFEQMRKKGFATDTLPFNVLMNFYVDAEEAEKVSILIDEMMERNVAF 265
Query: 226 DIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESS 285
D+ TYN+WI SCAA + D +++ ++M D +W Y L +++I + AE S
Sbjct: 266 DVCTYNIWIKSCAAMQDADAMEQVFNQMIRDETVVANWTTYTTLASMHIKLGNSEKAEES 325
Query: 286 TLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYL 345
L EAEK T R+ + +L+ LY+ LG K+++ ++W + T + + Y +LS+ +
Sbjct: 326 -LKEAEKRTTGREKKCFHYLMTLYSHLGKKEEVYRVWNWYKATFPTIHNLGYQEVLSALV 384
Query: 346 MLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
LG ++ + ++W S +S FD N LL ++ G KA + ++K P
Sbjct: 385 RLGDIEGAELLYEEW-ASKSSSFDPKTMNILLAWYAREGFVTKAEQTLNRFVEKGGNP 441
>gi|125541465|gb|EAY87860.1| hypothetical protein OsI_09282 [Oryza sativa Indica Group]
Length = 517
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 188/388 (48%), Gaps = 15/388 (3%)
Query: 20 NRPNSDYECFFYSRFLSSGSSQNECLDEETSNSDGKDDLKSRIFRISLPKRSA----TNV 75
+RPN C S + ++ E + DG D L + RI P++S
Sbjct: 18 SRPNPRPFCCSSSSSSAPPATARE-------DGDGGDLLSRCLLRI--PRKSGRAAAAAA 68
Query: 76 IQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMT 135
++RW E + + ELR + LR+++RY+ ALEI WM +H +F LS SD+ R++L+
Sbjct: 69 VERWARERGRVSPPELRRDVVRLRRARRYEQALEILSWMDSHNDFRLSPSDHMVRLELIA 128
Query: 136 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 195
KV G E Y+ L +A LLH Y + +KAE +++ L + +
Sbjct: 129 KVHGTSQAEEYYRKLSTAASKKAASFPLLHCYVTERNVQKAETFMAELQRYGLPVDPHSF 188
Query: 196 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 255
NE+M LY++ Q EKV V+ +KR N+ ++ +YN+W+++CA + V+ EM
Sbjct: 189 NEIMKLYVATCQYEKVLSVIYLMKRNNIPRNVLSYNIWMNACAEVSGLASVQSAFKEMLN 248
Query: 256 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 315
D W Y L NI+ A + L AE ++ + Y F++ YA L ++
Sbjct: 249 DDMVEVGWSTYCTLANIFKKYGQSSKA-LACLRTAETKLSSTGRLGYSFIMTCYAALNDR 307
Query: 316 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNR 375
D + ++W++ ++ ++ + NY+ + + +G + W ++ + D+ N
Sbjct: 308 DGVIRLWEASKIVPGRIPAANYMSAMVCLIKVGDIGRAEWTFGSW-EAESKKHDVRVSNV 366
Query: 376 LLGAFSDVGLTEKANEFHMLLLQKNCAP 403
LLGA+ G EKA H+ +L+K P
Sbjct: 367 LLGAYVRNGWIEKAERLHLHMLEKGAHP 394
>gi|413953409|gb|AFW86058.1| hypothetical protein ZEAMMB73_674343 [Zea mays]
Length = 626
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 138/237 (58%), Gaps = 1/237 (0%)
Query: 125 SDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVK 184
SD A R+DL+ K GI + E+YF LP ++KT TY ALL+ Y TEKAE L E++K
Sbjct: 177 SDQAIRLDLIAKSRGIAAAEKYFLDLPETSKTHLTYGALLNSYCKELMTEKAESLMEKMK 236
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
+ N +F A+ +N +MT+Y V Q EKV +++++K +V+PD+FTYN+W+ + AA +I
Sbjct: 237 ELNFAFTAMSFNSLMTMYTKVNQAEKVPSIIQDMKADDVLPDVFTYNVWMRALAALKDIP 296
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 304
V++ ++EM D + DW Y NL +IY+ A AE++ L E EK T Y F
Sbjct: 297 GVERVIEEMKRDGRVAPDWTTYSNLASIYVEAGMFEKAEAA-LKELEKRNTSNDIEAYQF 355
Query: 305 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 361
LI LY N ++ ++W+SL+ +M + +Y+ ++ L L +W+
Sbjct: 356 LITLYGRTQNLVEVHRVWRSLKRDNPRMANMSYLNMIQVLANLKDLSAAEACFKEWE 412
>gi|224138182|ref|XP_002322750.1| predicted protein [Populus trichocarpa]
gi|222867380|gb|EEF04511.1| predicted protein [Populus trichocarpa]
Length = 516
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 106/333 (31%), Positives = 175/333 (52%), Gaps = 10/333 (3%)
Query: 71 SATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATR 130
S V+ +W+ EG + ++KELR+ +RY HALEIS WM + L+ A R
Sbjct: 61 SVIPVLDKWIQEGETIWEDLIHALIKELRQYRRYHHALEISMWMTDKRYLALTSRAVAVR 120
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSF 190
+DL++KV GI E YF +P K E+Y ALL+ YA K EKAE + +R+++ +
Sbjct: 121 LDLISKVHGIEQVENYFNNIPTKLKGLESYGALLNCYAYVKSVEKAEAVMQRMRELGFAR 180
Query: 191 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 250
L++ M+ LY G EK+ ++ E++ + D F Y + +SS AA + + ++K L
Sbjct: 181 KPLVFTVMLNLYYKTGNTEKLDPLMREMEENGISFDKFAYCIRLSSYAAASDSEGLEKTL 240
Query: 251 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT-QRQWITYDFLIILY 309
+ D DW Y + N Y + L++ L E+ IT +R+ YD+L+ Y
Sbjct: 241 KRIESDPNVVLDWATYATVANGY-SKVGLLDKALEMLKRCERLITGERRSTPYDYLMTQY 299
Query: 310 AGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD 369
A G K+ + ++W+ + K+ + +R I +++S L L+ +I ++W+ D D
Sbjct: 300 ATTGTKEDVLRVWE---LHKRYVGNRKNISVITSLLKFDDLESAEKIFEEWESQKLCD-D 355
Query: 370 ISACNRLLGAFSDVGLTEKANEFHMLLLQKNCA 402
I N L+ A+S GL EKA +LLQ+ +
Sbjct: 356 IIIPNFLVDAYSRKGLLEKAE----MLLQRTMS 384
>gi|357446577|ref|XP_003593564.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482612|gb|AES63815.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 495
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 167/311 (53%), Gaps = 2/311 (0%)
Query: 79 WVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVF 138
WV +GN+ +V EL+ I+++LRK R+ AL++SEWM + S ++A +DL +V
Sbjct: 51 WVYKGNKVSVGELQRIVRDLRKRSRFTQALQVSEWMNKIGVCIFSPVEHAVHLDLTGRVH 110
Query: 139 GIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEM 198
G ++ E YF L + +T+ ALL+ Y + +K+ +++K+ + ++L YN +
Sbjct: 111 GFYAAETYFNSLKDIERNEKTHGALLNCYVRQRQVDKSLSHLKKMKELGFALSSLTYNNI 170
Query: 199 MTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSG 258
M LY ++GQ EKV+ V E+K +V+PD F+Y + I S +ID + L EM
Sbjct: 171 MCLYTNIGQHEKVSDVFNEMKENHVLPDNFSYRICIGSYGVRSDIDGMNAILKEMESQPH 230
Query: 259 GSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKI 318
DW Y + N YI A L + L + EK + + Y+ LI LYA LG K+++
Sbjct: 231 IVMDWNTYSVVANFYIKAE-LSSEAIDALRKCEKRLDDKDGEGYNHLISLYARLGKKNEV 289
Query: 319 DQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLG 378
++W + ++ +R++I +L S + L E +I+ +W+ S +D N ++
Sbjct: 290 LRLWDMEKSACKRCLNRDFITMLESLVKLEEFDEADKILKEWEFSGNC-YDYGVPNVVVV 348
Query: 379 AFSDVGLTEKA 389
+S+ EKA
Sbjct: 349 GYSEKDFPEKA 359
>gi|17529324|gb|AAL38889.1| unknown protein [Arabidopsis thaliana]
Length = 537
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 184/348 (52%), Gaps = 4/348 (1%)
Query: 57 DLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVT 116
+L ++ +S+ + + +++ EG +L K LRK +R +HA EI +WM
Sbjct: 72 ELYKKLSMLSVTGGTVAETLNQFIMEGITVRKDDLFRCAKTLRKFRRPQHAFEIFDWMEK 131
Query: 117 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE-TYTALLHLYAGAKWTEK 175
K S SD+A +DL+ K G+ + E YF L SAK + TY AL++ Y EK
Sbjct: 132 RK-MTFSVSDHAICLDLIGKTKGLEAAENYFNNLDPSAKNHQSTYGALMNCYCVELEEEK 190
Query: 176 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
A+ FE + + N N+L +N MM++YM + Q EKV ++V+ IK++ + P TY++W+
Sbjct: 191 AKAHFEIMDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAIKQRGISPCGVTYSIWMQ 250
Query: 236 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 295
SC + ++D ++K +DEM DS W + NL IY T + L S L E+ +
Sbjct: 251 SCGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIY-TKAGLYEKADSALKSMEEKMN 309
Query: 296 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 355
++ FL+ LYAG+ ++ ++W+SL+ + ++ + +Y+ +L + LG L + +
Sbjct: 310 PNNRDSHHFLMSLYAGISKGPEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDLDGIKK 369
Query: 356 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
I +W +S +D+ N + + + E+A + ++K+ P
Sbjct: 370 IFTEW-ESKCWAYDMRLANIAINTYLKGNMYEEAEKILDGAMKKSKGP 416
>gi|255647669|gb|ACU24296.1| unknown [Glycine max]
Length = 484
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 106/348 (30%), Positives = 188/348 (54%), Gaps = 12/348 (3%)
Query: 31 YSRFLSSGS--SQNECLDEETSNSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATV 88
Y+R +S G + C ET K +L + + + + + + +++ EG
Sbjct: 3 YARLISGGGWLLRRLCTAAETPAK--KPNLYRMLSALDITGGTVSQTLDQYIMEGKVIKK 60
Query: 89 SELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFE 148
EL +++LRK +R++HALEI EWM K S S+YA ++DL++K G+ + E +F
Sbjct: 61 PELERCVEQLRKYRRFQHALEIIEWMEIRK-VNFSWSNYAVQLDLVSKTKGVDAAENFFG 119
Query: 149 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 208
GLP AK TY ALL+ Y +KA F+ + + N L +N +MTL+M +G+
Sbjct: 120 GLPPPAKNRYTYGALLNCYCKELMKDKALSHFDTMDELGYVTN-LAFNNVMTLFMKLGEP 178
Query: 209 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268
+KV +VE +K++ + FTY++W++SCA++ ++ ++ +EM ++ G W Y N
Sbjct: 179 QKVPQLVELMKKRTIPMSPFTYHIWMNSCASSNDLGGAERVYEEMKTENEGQIGWHTYSN 238
Query: 269 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 328
L +IY+ AE L E+ + +Q Y L+ LYAG GN ++ ++W SL+ +
Sbjct: 239 LASIYVKFKDFEKAE-MMLKMLEEQVKPKQRDAYHCLLGLYAGTGNLGEVHRVWDSLK-S 296
Query: 329 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD---ISAC 373
+T+ +Y+ +LS+ L ++ + + +W+ S S +D +S C
Sbjct: 297 VSPVTNFSYLVMLSTLRRLNDMEGLTKCFKEWEASCVS-YDARLVSVC 343
>gi|297803972|ref|XP_002869870.1| hypothetical protein ARALYDRAFT_354609 [Arabidopsis lyrata subsp.
lyrata]
gi|297315706|gb|EFH46129.1| hypothetical protein ARALYDRAFT_354609 [Arabidopsis lyrata subsp.
lyrata]
Length = 480
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 112/362 (30%), Positives = 193/362 (53%), Gaps = 8/362 (2%)
Query: 39 SSQNECLDEETSNSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKEL 98
S Q L +S G+ L RI + PK S V+ W EGN + ELR ++KEL
Sbjct: 19 SLQRRTLSRGYGSSMGRFGLYKRISPLGDPKISIVPVLDEWRGEGNYTSKEELRGMIKEL 78
Query: 99 RKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE 158
K +R+ HALE+S WM F LS +D+ TRI+L+++V G+ E +FE +P K
Sbjct: 79 IKYKRFVHALEVSRWMSDRMFFPLSLTDFGTRINLISRVCGLGEAEVFFENIPKDMKGIA 138
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+++LL YA K EKA +L E +K++ +S + YN MM +Y + K+ ++ E+
Sbjct: 139 VFSSLLSCYAREKSAEKAAKLVEAMKEAGVSMDTRCYNLMMNMYYQMNVHGKLDDLMLEM 198
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
++ V D FT ++ +S+ AA NI+ ++K ++++S S + DW Y N ++
Sbjct: 199 EQNGVSFDQFTLSIRLSAYAAASNIEGIEKTIEKISSMSETAIDWTIYSAAANAFLKV-E 257
Query: 279 LVNAESSTLVEAEKSITQRQW-ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
L++ + L + E+ + + + L+ LY G K+ + ++W + ++K+ + Y
Sbjct: 258 LIDEATMMLKKCEEFVNEDSGNEAFHTLLKLYGETGRKEDLSRVWLRFK-EERKVFNSGY 316
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 397
++SS L G ++ V ++ +QW+ S +D N L+ + + LTEKA LLL
Sbjct: 317 KIMISSALKFGDIELVEKVFNQWESEKLS-YDFRIPNLLINFYCEKDLTEKAE----LLL 371
Query: 398 QK 399
+K
Sbjct: 372 KK 373
>gi|242096946|ref|XP_002438963.1| hypothetical protein SORBIDRAFT_10g029040 [Sorghum bicolor]
gi|241917186|gb|EER90330.1| hypothetical protein SORBIDRAFT_10g029040 [Sorghum bicolor]
Length = 502
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 177/362 (48%), Gaps = 3/362 (0%)
Query: 47 EETSNSDGKDDLKSRIFRISLPKRSATNVIQRWVSEG-NQATVSELRHILKELRKSQRYK 105
EE + L S ++ + P I+ W + N +LR I+KELR +R++
Sbjct: 41 EEGTPPARPPTLGSTLWPLGNPGTLLVPEIELWAARPENHLRDVDLRRIVKELRTRRRHR 100
Query: 106 HALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLH 165
ALE+SEWM D+A +DL+ + G+ + E YF L KT + Y ALL+
Sbjct: 101 QALEVSEWMNLKGHVKFLPKDHAVHLDLIGHIHGVGAAETYFNNLSDKDKTEKPYGALLN 160
Query: 166 LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVP 225
Y + +KA F+++K+ F AL YN +M+LY ++ Q E+V V+ E+K +VP
Sbjct: 161 CYTRERLVDKALAHFQKMKELGFVFTALPYNNLMSLYTNIEQHERVPSVMAEMKSNGIVP 220
Query: 226 DIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESS 285
D F+Y + I+S + ++ L+EM C+ DW Y + + YI L S
Sbjct: 221 DNFSYRICINSYGTRADFFGLENTLEEMECEPQIVVDWNTYTVVASQYIKGD-LREKAYS 279
Query: 286 TLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYL 345
L +AE + + Y LI LY LG+K ++ ++W Q+ + +Y IL+ +
Sbjct: 280 ALKKAEAKMGIKDLAAYRHLISLYGHLGDKSEVKRLWAVQMSNCQRHLNTDYTNILAVLV 339
Query: 346 MLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 405
L + E +++ +W +++ ++FD N LL + GL +KA L K P +
Sbjct: 340 KLDEIAEAEDLLKEW-ETSKNEFDFKVPNVLLTWYCQKGLLDKAEALLDGFLIKGKMPPS 398
Query: 406 AS 407
S
Sbjct: 399 TS 400
>gi|242091818|ref|XP_002436399.1| hypothetical protein SORBIDRAFT_10g001830 [Sorghum bicolor]
gi|241914622|gb|EER87766.1| hypothetical protein SORBIDRAFT_10g001830 [Sorghum bicolor]
Length = 536
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 165/304 (54%), Gaps = 2/304 (0%)
Query: 58 LKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTH 117
L R+FR ++ + ++ +A E+ ++ +R++ Y+ AL++SE M T
Sbjct: 21 LYRRLFRKGSTPQAVREEVDGFLDSRKRAFKWEVGVCVRRMRRNALYRPALKLSEVM-TR 79
Query: 118 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 177
+ + SD A +DL+ K GI + E+YF LP ++KT TY ALL+ Y TEKAE
Sbjct: 80 RGMNPTVSDQAICLDLIAKSRGIAAAEKYFLDLPETSKTHLTYGALLNSYCKELMTEKAE 139
Query: 178 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 237
L ++ + N +F A+ +N +MT+Y V Q EKV +++ +K +V+P +FTYN+W+ +
Sbjct: 140 SLMAKMSELNFAFTAMPFNSLMTMYTKVNQPEKVPGIIQYMKADDVLPHVFTYNVWMRAL 199
Query: 238 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 297
AA +I V++ ++EM D + DW Y NL +IY+ A AE++ L E EK T
Sbjct: 200 AALNDIPGVERVIEEMKRDGRVAPDWTTYSNLASIYVDAGLFEKAEAA-LKELEKRNTSN 258
Query: 298 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 357
Y FLI LY N ++ ++W+SL+ +M + +Y+ ++ L L
Sbjct: 259 DVEAYQFLITLYGRTQNLVEVHRVWRSLKRNNPRMANMSYLNMIQVLANLKDLPAAEACF 318
Query: 358 DQWK 361
+W+
Sbjct: 319 KEWE 322
>gi|15217734|ref|NP_171739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173342|sp|Q9FZ24.1|PPR4_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g02370, mitochondrial; Flags: Precursor
gi|9857533|gb|AAG00888.1|AC064879_6 Hypothetical protein [Arabidopsis thaliana]
gi|332189300|gb|AEE27421.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 184/348 (52%), Gaps = 4/348 (1%)
Query: 57 DLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVT 116
+L ++ +S+ + + +++ EG +L K LRK +R +HA EI +WM
Sbjct: 72 ELYKKLSMLSVTGGTVAETLNQFIMEGITVRKDDLFRCAKTLRKFRRPQHAFEIFDWMEK 131
Query: 117 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE-TYTALLHLYAGAKWTEK 175
K S SD+A +DL+ K G+ + E YF L SAK + TY AL++ Y EK
Sbjct: 132 RK-MTFSVSDHAICLDLIGKTKGLEAAENYFNNLDPSAKNHQSTYGALMNCYCVELEEEK 190
Query: 176 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
A+ FE + + N N+L +N MM++YM + Q EKV ++V+ +K++ + P TY++W+
Sbjct: 191 AKAHFEIMDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAMKQRGISPCGVTYSIWMQ 250
Query: 236 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 295
SC + ++D ++K +DEM DS W + NL IY T + L S L E+ +
Sbjct: 251 SCGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIY-TKAGLYEKADSALKSMEEKMN 309
Query: 296 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 355
++ FL+ LYAG+ ++ ++W+SL+ + ++ + +Y+ +L + LG L + +
Sbjct: 310 PNNRDSHHFLMSLYAGISKGPEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDLDGIKK 369
Query: 356 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
I +W +S +D+ N + + + E+A + ++K+ P
Sbjct: 370 IFTEW-ESKCWAYDMRLANIAINTYLKGNMYEEAEKILDGAMKKSKGP 416
>gi|356536682|ref|XP_003536865.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02370, mitochondrial-like [Glycine max]
Length = 593
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/348 (30%), Positives = 188/348 (54%), Gaps = 12/348 (3%)
Query: 31 YSRFLSSGS--SQNECLDEETSNSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATV 88
Y+R +S G + C ET K +L + + + + + + +++ EG
Sbjct: 3 YARLISGGGWLLRRLCTAAETPAK--KPNLYRMLSALDITGGTVSQTLDQYIMEGKVIKK 60
Query: 89 SELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFE 148
EL +++LRK +R++HALEI EWM K S S+YA ++DL++K G+ + E +F
Sbjct: 61 PELERCVEQLRKYRRFQHALEIIEWMEIRK-VNFSWSNYAVQLDLVSKTKGVDAAENFFG 119
Query: 149 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 208
GLP AK TY ALL+ Y +KA F+ + + N L +N +MTL+M +G+
Sbjct: 120 GLPPPAKNRYTYGALLNCYCKELMKDKALSHFDTMDELGYVTN-LAFNNVMTLFMKLGEP 178
Query: 209 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268
+KV +VE +K++ + FTY++W++SCA++ ++ ++ +EM ++ G W Y N
Sbjct: 179 QKVPQLVELMKKRTIPMSPFTYHIWMNSCASSNDLGGAERVYEEMKTENEGQIGWHTYSN 238
Query: 269 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 328
L +IY+ AE L E+ + +Q Y L+ LYAG GN ++ ++W SL+ +
Sbjct: 239 LASIYVKFKDFEKAE-MMLKMLEEQVKPKQRDAYHCLLGLYAGTGNLGEVHRVWDSLK-S 296
Query: 329 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD---ISAC 373
+T+ +Y+ +LS+ L ++ + + +W+ S S +D +S C
Sbjct: 297 VSPVTNFSYLVMLSTLRRLNDMEGLTKCFKEWEASCVS-YDARLVSVC 343
>gi|147803609|emb|CAN75355.1| hypothetical protein VITISV_002476 [Vitis vinifera]
Length = 736
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/300 (32%), Positives = 160/300 (53%), Gaps = 6/300 (2%)
Query: 109 EISEWMVTHKE-FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLY 167
++ EWM E F LS SD A ++DL+ KV G+ S E YF LP + K Y ALL+ Y
Sbjct: 320 KVYEWMNNRGERFRLSSSDAAIQLDLIAKVCGVSSAEDYFSRLPDTLKDKRIYGALLNAY 379
Query: 168 AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 227
AK +KAE L E+++ + L +N MMTLYM++ +++KV ++ E+ KN+ DI
Sbjct: 380 VQAKMRDKAEILIEKLRNKGYATTPLPFNVMMTLYMNLKELDKVQSMISEMMNKNIQLDI 439
Query: 228 FTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTL 287
++YN+W+SSC +T ++QV ++M + + +W + + +YI AE L
Sbjct: 440 YSYNIWLSSCESTERMEQV---FEQMKLERTINPNWTTFSTMATMYIKLGQFEKAE-ECL 495
Query: 288 VEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 347
+ E IT R + Y +LI LY GNK ++ + W + + + Y ++SS + +
Sbjct: 496 KKVESRITNRDRMPYHYLISLYGSTGNKAEVYRAWNIYKSKFPNIPNLGYHALISSLVRV 555
Query: 348 GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
G L+ +I ++W S S +D N LLG + G EKA F +++ P + +
Sbjct: 556 GDLEGAEKIYEEW-LSVKSSYDPRIGNLLLGCYVKEGFLEKAEGFLDHMIEAGGKPNSTT 614
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 3/51 (5%)
Query: 64 RISL---PKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEIS 111
RISL P+ + +V+ +W +EG + T EL ++KELRK +R+K ALE++
Sbjct: 63 RISLMENPEMGSASVLNQWENEGKRLTKWELCRVVKELRKFKRFKMALELT 113
>gi|125532539|gb|EAY79104.1| hypothetical protein OsI_34210 [Oryza sativa Indica Group]
Length = 513
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 189/355 (53%), Gaps = 12/355 (3%)
Query: 54 GKDDLKSRIFRISLPKRSATNVIQRW-VSEGNQATVSELRHILKELRKSQRYKHALEISE 112
G+D L R+ P+ V+++W ++E + + EL+ ++K LR+ +R+ ALE+S
Sbjct: 48 GEDSLFRRVAGAD-PRIPLAPVLEQWWLAEEHPVSKPELQSLVKYLRRRRRFSQALELSM 106
Query: 113 WMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKW 172
WM + LS D A R++L++KV G+ YF+ +P + + Y +LL Y A+
Sbjct: 107 WMTERRHLHLSPGDVAYRLELISKVHGLDKAVEYFDAVPNQLRELQCYGSLLRCYTEAER 166
Query: 173 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 232
EKAEELFE ++ ++ N+ YN MM LY +GQVE+V + + ++ +VPDIFT +
Sbjct: 167 VEKAEELFENMRGMGMA-NSYAYNAMMNLYSQIGQVERVHSMYKSMEEGGIVPDIFTIDN 225
Query: 233 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 292
+S+ A +++ ++K L++ SC++ S W + + +++ A A E+EK
Sbjct: 226 LVSAYADVEDVEAIEKVLEKASCNNLMS--WHSFAIVGKVFMKAGMQERA-LQAFQESEK 282
Query: 293 SITQRQ--WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN--YICILSSYLMLG 348
IT R+ + Y FL+ +YA L ++D+IW R +K ++ N Y+C +S L +
Sbjct: 283 RITARKDGRVAYGFLLTMYADLQMDSEVDRIWDVYR-SKVPASACNTMYMCRISVLLKMN 341
Query: 349 HLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
+ + ++W +S D N LL A+ GL EKA ++K P
Sbjct: 342 DIVGAEKAYEEW-ESKHVYHDSRLINILLTAYCKEGLMEKAEALVDQFIKKGRTP 395
>gi|225446335|ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial [Vitis vinifera]
Length = 499
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 189/356 (53%), Gaps = 6/356 (1%)
Query: 49 TSNSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHAL 108
TSN+ K+ L+SRI + S +++W EG +L ++++LR +RY HAL
Sbjct: 29 TSNAP-KESLQSRISPAIDLRVSIVPALEQWRKEGRSIKQQDLHRLIRKLRTFKRYNHAL 87
Query: 109 EISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYA 168
EI EW+ F +S D A ++DL++KV G+ E+YF P S ++ + Y ALL+ Y+
Sbjct: 88 EIYEWIRDKFYFDISPGDVAIQLDLISKVHGLEQAEKYFNETPNSLRSFQVYGALLNCYS 147
Query: 169 GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIF 228
K EKAE + + ++ L YN M+ LY +G+ EK+ +++E++ + D F
Sbjct: 148 QKKSLEKAEAIMQEMRDMGF-VKTLSYNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSF 206
Query: 229 TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV 288
TY + +++ AT +++ ++K L ++ D + DW Y+ N Y+ A L L
Sbjct: 207 TYCIRLNAYCATSDMEGMEKLLMKLETDPAVNSDWNAYIVAANGYLKAD-LKEKAVEMLK 265
Query: 289 EAEKSITQR-QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 347
++E+ I+ R + Y+ L+ LYA +GNK ++ +IW +L T K + Y+ ++SS L L
Sbjct: 266 KSEQFISGRSRRFGYEILLTLYATMGNKTEVYRIW-NLYKTIGKFFNTGYVAMVSSLLKL 324
Query: 348 GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
+ + ++W S FD N L+ A+ GL EKA + +++ P
Sbjct: 325 DDMDGAEKTFEEW-LSGNKFFDFRVPNLLIRAYCKKGLLEKAEQLVSRAIEQGEEP 379
>gi|115482784|ref|NP_001064985.1| Os10g0501300 [Oryza sativa Japonica Group]
gi|22165054|gb|AAM93671.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432901|gb|AAP54477.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113639594|dbj|BAF26899.1| Os10g0501300 [Oryza sativa Japonica Group]
Length = 513
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 184/341 (53%), Gaps = 12/341 (3%)
Query: 54 GKDDLKSRIFRISLPKRSATNVIQRW-VSEGNQATVSELRHILKELRKSQRYKHALEISE 112
G+D L R+ P+ V+++W ++E + EL+ ++K LR+ R+ ALE+S
Sbjct: 48 GEDSLFRRVAGAD-PRIPLAPVLEQWWLAEERPVSKPELQSLVKYLRRRCRFSQALELSM 106
Query: 113 WMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKW 172
WM + LS D A R++L++KV G+ YF+ +P + + Y +LL YA A+
Sbjct: 107 WMTERRHLHLSPGDVAYRLELISKVHGLDKAVEYFDAVPNQLRELQCYGSLLRCYAEAER 166
Query: 173 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 232
EKAEELFE ++ ++ N+ YN MM LY +GQVE+V + + ++ +VPDIFT +
Sbjct: 167 VEKAEELFENMRGMGMA-NSYAYNAMMNLYSQIGQVERVDSMYKAMEEGGIVPDIFTIDN 225
Query: 233 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 292
+S+ A +++ ++K L++ SC++ S W + + +++ A A E+EK
Sbjct: 226 LVSAYADVEDVEAIEKVLEKASCNNLMS--WHSFAIVGKVFMKAGMQERA-LQAFQESEK 282
Query: 293 SITQRQ--WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN--YICILSSYLMLG 348
IT R+ + Y FL+ +YA L ++D+IW R +K ++ N Y+C +S L +
Sbjct: 283 RITARKDGRVAYGFLLTMYADLQMDSEVDRIWDVYR-SKVPASACNTMYMCRISVLLKMN 341
Query: 349 HLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
+ + ++W +S D N LL A+ GL EKA
Sbjct: 342 DIVGAEKAYEEW-ESKHVYHDSRLINILLTAYCKEGLMEKA 381
>gi|356542147|ref|XP_003539532.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Glycine max]
Length = 483
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 190/343 (55%), Gaps = 10/343 (2%)
Query: 58 LKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTH 117
L++R+F++ P + ++++WV EG + T +L +++ L +S+R+ HAL++ EWM
Sbjct: 24 LENRVFKVGDPVIPVSPILKQWVEEGREVTKLQLENLVYRLTQSRRFTHALQVLEWMSNE 83
Query: 118 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 177
+ + LS + A +I+L++KV G+ E+YF G+P + + Y ALL YA K E+AE
Sbjct: 84 RNYELSPGNIAKQINLISKVRGLEQAEKYFRGIPDAKIEFKIYAALLRCYAEHKSVEEAE 143
Query: 178 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 237
+ +++K+ + N M+ LY G+ EK+ +++E+K K++ + TY + +++
Sbjct: 144 AVLKKIKELHPVNITACCNMMLELYAKKGKYEKLDRLMQEMKEKDIC-NAGTYTIRLNAY 202
Query: 238 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE---KSI 294
+I ++K L +M D + DW Y+ N Y H ++ L ++E +
Sbjct: 203 VIATDIKGMEKLLMQMEVDPMATVDWYTYMTAANGY-RKVHNFEKVAAMLKKSEHVARGK 261
Query: 295 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 354
T+R + Y+ + +YA +GNKD++ ++W T K +++YI +LSS + L +
Sbjct: 262 TKR--LAYESIQTMYAIIGNKDEVHRLWNMC--TSPKKPNKSYIRMLSSLVKLDDIDGAE 317
Query: 355 EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 397
+I+++W +S +FD+ N ++ A+ G +KA + LL
Sbjct: 318 KILEEW-ESVHENFDVRIPNLMISAYCKWGQFDKAEAYIRRLL 359
>gi|147775992|emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]
Length = 499
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 188/356 (52%), Gaps = 6/356 (1%)
Query: 49 TSNSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHAL 108
TSN+ K+ L+SRI + S +++W EG +L ++++LR +RY HAL
Sbjct: 29 TSNAP-KESLQSRISPAIDLRVSIVPALEQWRKEGRSIKQQDLHRLIRKLRTFKRYNHAL 87
Query: 109 EISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYA 168
EI EW+ F +S D A ++DL++KV G+ E+YF P S ++ + Y ALL+ Y+
Sbjct: 88 EIYEWIRDKFYFDISPGDVAIQLDLISKVHGLEQAEKYFNETPNSLRSFQVYGALLNCYS 147
Query: 169 GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIF 228
K EKAE + + ++ L YN M+ LY +G+ EK+ +++E++ + D F
Sbjct: 148 QKKSLEKAEAIMQEMRDMGF-VKTLSYNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSF 206
Query: 229 TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV 288
TY + +++ AT +++ ++K L ++ D + DW Y+ N Y+ A L L
Sbjct: 207 TYCIRLNAYCATSDMEGMEKLLMKLETDPAVNSDWNAYIVAANGYLKAD-LKEKAVEMLK 265
Query: 289 EAEKSITQR-QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 347
++E+ I+ R + Y+ L+ LYA +GNK + +IW +L T K + Y+ ++SS L L
Sbjct: 266 KSEQFISGRSRRFGYEILLTLYATMGNKTEXYRIW-NLYKTIGKFFNTGYVAMVSSLLKL 324
Query: 348 GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
+ + ++W S FD N L+ A+ GL EKA + +++ P
Sbjct: 325 DDMDGAEKTFEEW-LSGNKFFDFRVPNLLIRAYCKKGLLEKAEQLVSRAIEQGEEP 379
>gi|357442213|ref|XP_003591384.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480432|gb|AES61635.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 194/377 (51%), Gaps = 15/377 (3%)
Query: 31 YSRFLSSGSS--QNECLDEETSN-SDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQAT 87
YSR +S G + C + + K +L R+ + + + + +++ EG
Sbjct: 62 YSRLISGGGRLLRRLCTAATAAELPNKKANLYRRLADLEKTGGTVSQTLNQYIIEGKALG 121
Query: 88 VSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYF 147
EL ++ELRK +R+ HA EI EWM+ ++ S +YA +DL++KV G+ E +F
Sbjct: 122 KDELERCVQELRKYRRFHHAFEIMEWMMM-RQINFSWDNYAVYLDLVSKVKGVVEAENHF 180
Query: 148 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 207
P AK TY +LL+ Y +KA F+++ + +L + +M++YM + Q
Sbjct: 181 NSFPPPAKNKYTYGSLLNCYCKELMLDKALSHFDKMDEFGY-LTSLSFTNLMSMYMRLSQ 239
Query: 208 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 267
KV +V +K + + FTY LW++SCAA ++ +V++ +EM + DW Y
Sbjct: 240 PSKVPQLVNVMKERKIRMTEFTYILWMNSCAALNDLGEVERVYEEMKREDEDKIDWKTYS 299
Query: 268 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 327
NL IYI A AE L + E + RQ TY FL+ LYAG GN ++ ++W +L+
Sbjct: 300 NLAAIYIKAGFFEKAE-LMLKKVEGVMKPRQRETYHFLLSLYAGTGNVKEVYRVWGTLKK 358
Query: 328 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 387
+T+R+Y+ +LS+ L ++ + ++ +W+ +S +RL+G L++
Sbjct: 359 I-TPVTNRSYLIMLSNLRRLNDMEGIIKLFKEWESR-----HVSYDSRLVGVAVQAYLSQ 412
Query: 388 KANEFHMLLLQ---KNC 401
++ +L+ + K+C
Sbjct: 413 NMDKEAVLVFEEALKSC 429
>gi|4558568|gb|AAD22661.1|AC007138_25 hypothetical protein [Arabidopsis thaliana]
gi|7268583|emb|CAB80692.1| hypothetical protein [Arabidopsis thaliana]
Length = 501
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 100/315 (31%), Positives = 163/315 (51%), Gaps = 3/315 (0%)
Query: 75 VIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLM 134
+ ++V EG +L K+LRK ++ + ALEI EWM KE + SD+A R++L+
Sbjct: 58 TLNQFVMEGVPVKKHDLIRYAKDLRKFRQPQRALEIFEWM-ERKEIAFTGSDHAIRLNLI 116
Query: 135 TKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALM 194
K G+ + E YF L S K TY +LL+ Y K KA+ FE + N N+L
Sbjct: 117 AKSKGLEAAETYFNSLDDSIKNQSTYGSLLNCYCVEKEEVKAKAHFENMVDLNHVSNSLP 176
Query: 195 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 254
+N +M +YM +GQ EKV +V +K K++ P TY++WI SC + ++D V+K LDEM
Sbjct: 177 FNNLMAMYMGLGQPEKVPALVVAMKEKSITPCDITYSMWIQSCGSLKDLDGVEKVLDEMK 236
Query: 255 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 314
+ G W + NL IYI AE + L E ++ Y FLI LY G+ N
Sbjct: 237 AEGEGIFSWNTFANLAAIYIKVGLYGKAEEA-LKSLENNMNPDVRDCYHFLINLYTGIAN 295
Query: 315 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 374
++ ++W L+ + + +Y+ +L + L + V ++ +W +S +D+ N
Sbjct: 296 ASEVYRVWDLLKKRYPNVNNSSYLTMLRALSKLDDIDGVKKVFAEW-ESTCWTYDMRMAN 354
Query: 375 RLLGAFSDVGLTEKA 389
+ ++ + E+A
Sbjct: 355 VAISSYLKQNMYEEA 369
>gi|18411800|ref|NP_567220.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75163252|sp|Q93WC5.1|PP300_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g01990, mitochondrial; Flags: Precursor
gi|14517494|gb|AAK62637.1| AT4g01990/T7B11_26 [Arabidopsis thaliana]
gi|16323354|gb|AAL15390.1| AT4g01990/T7B11_26 [Arabidopsis thaliana]
gi|332656708|gb|AEE82108.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 502
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 100/315 (31%), Positives = 163/315 (51%), Gaps = 3/315 (0%)
Query: 75 VIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLM 134
+ ++V EG +L K+LRK ++ + ALEI EWM KE + SD+A R++L+
Sbjct: 59 TLNQFVMEGVPVKKHDLIRYAKDLRKFRQPQRALEIFEWM-ERKEIAFTGSDHAIRLNLI 117
Query: 135 TKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALM 194
K G+ + E YF L S K TY +LL+ Y K KA+ FE + N N+L
Sbjct: 118 AKSKGLEAAETYFNSLDDSIKNQSTYGSLLNCYCVEKEEVKAKAHFENMVDLNHVSNSLP 177
Query: 195 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 254
+N +M +YM +GQ EKV +V +K K++ P TY++WI SC + ++D V+K LDEM
Sbjct: 178 FNNLMAMYMGLGQPEKVPALVVAMKEKSITPCDITYSMWIQSCGSLKDLDGVEKVLDEMK 237
Query: 255 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 314
+ G W + NL IYI AE + L E ++ Y FLI LY G+ N
Sbjct: 238 AEGEGIFSWNTFANLAAIYIKVGLYGKAEEA-LKSLENNMNPDVRDCYHFLINLYTGIAN 296
Query: 315 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 374
++ ++W L+ + + +Y+ +L + L + V ++ +W +S +D+ N
Sbjct: 297 ASEVYRVWDLLKKRYPNVNNSSYLTMLRALSKLDDIDGVKKVFAEW-ESTCWTYDMRMAN 355
Query: 375 RLLGAFSDVGLTEKA 389
+ ++ + E+A
Sbjct: 356 VAISSYLKQNMYEEA 370
>gi|242096944|ref|XP_002438962.1| hypothetical protein SORBIDRAFT_10g029030 [Sorghum bicolor]
gi|241917185|gb|EER90329.1| hypothetical protein SORBIDRAFT_10g029030 [Sorghum bicolor]
Length = 503
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 179/363 (49%), Gaps = 5/363 (1%)
Query: 47 EETSNSDGKDDLKSRIFRISLPKRSATNVIQRWVSE-GNQATVSELRHILKELRKSQRYK 105
EE + L S + + P I+ W + G + EL ++K+LR+ R++
Sbjct: 41 EEGTPPARPPTLWSTLCPLGKPGTLLVPEIELWAARSGKRLRPCELHFVVKDLRRRHRHR 100
Query: 106 HALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLH 165
ALE+SEWM D+A +DL+ + G+ + E YF L KT + Y ALL+
Sbjct: 101 QALEVSEWMNLKGHVKFLPKDHAVHLDLIGHIHGVGAAETYFNNLSDKDKTEKPYGALLY 160
Query: 166 LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVP 225
Y +KA F+++K+ F L Y+ +M LY +V Q E+V V+ E+K +VP
Sbjct: 161 CYTRECLVDKALAHFQKMKELGFVFTPLPYSNLMILYANVEQHERVPSVMAEMKSNGIVP 220
Query: 226 DIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESS 285
+ F+YN+ I++ + ++ L+EM S DW Y ++ + YI L S
Sbjct: 221 NNFSYNICINAYGTRADFSGLENTLEEMEFASQVVVDWRTYADVASHYIKGD-LREKAYS 279
Query: 286 TLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK-MTSRNYICILSSY 344
L +AE + ++ Y LI LY LG+K +I ++W L+M K K ++ Y +L+
Sbjct: 280 ALQKAEAKMDEKDSFAYSHLISLYGHLGDKSEIKRLW-VLQMLKCKGCINKGYKYMLTVL 338
Query: 345 LMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 404
+ L + E +++ +W +S+ ++FD N LL + GL +KA L+K P+
Sbjct: 339 VKLDEIAEAEDLLKKW-ESSKNEFDFKVPNILLKGYCQWGLLDKAEALLDGFLRKGKKPS 397
Query: 405 NAS 407
S
Sbjct: 398 ATS 400
>gi|388517969|gb|AFK47046.1| unknown [Lotus japonicus]
Length = 496
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 187/341 (54%), Gaps = 5/341 (1%)
Query: 58 LKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTH 117
L++R+ + P+ ++ +WV G T +L+ ++ L +R+ HAL++SEWM
Sbjct: 36 LETRVLKSGDPRTPMAPILNQWVEGGGDITQIQLQRLITRLAYFRRFTHALQVSEWMSNE 95
Query: 118 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 177
+ + LS A RI L++KV G+ E +F+G+P + + Y +LL YA K E+AE
Sbjct: 96 RNYDLSSGLIAKRIHLISKVHGLKKAEDFFQGIPDDKRGFKIYASLLSCYAEHKSLEEAE 155
Query: 178 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 237
+ +++K+ + YN ++ LY G+ EK+ +++E+K +N + + T+ + +++
Sbjct: 156 AIMKKIKELRPMHLTVCYNILLKLYAQKGKYEKLDRLMQEMK-ENDLCNGATFTIRLNAY 214
Query: 238 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 297
A +++ ++K L +M D + DW Y N Y+ A ++ A ++ L ++E+S+ +
Sbjct: 215 VAAKDVEGMEKLLMQMEADPMATVDWYTYSTAANGYLKAGNVEKALAA-LKKSEQSVKGK 273
Query: 298 QW-ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 356
+ + Y+ L YA +GNKD++ ++W ++ Q + +YIC+LSS L L +I
Sbjct: 274 KLRLAYESLQSTYAAIGNKDEVYRLWNRIK-NLQNCWNSSYICMLSSLLKLDDFDGAEKI 332
Query: 357 IDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 397
+ +W +S +FD N ++ A+ GL +KA + LL
Sbjct: 333 LAEW-ESEHKNFDTRIPNLMITAYCKRGLLDKAEAYIQKLL 372
>gi|255581582|ref|XP_002531596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528792|gb|EEF30799.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 300
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/257 (35%), Positives = 140/257 (54%), Gaps = 5/257 (1%)
Query: 54 GKDDLKSRIFRISL---PKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEI 110
GKD+L RIS PK S ++ +W+ EG +L+ +KELR +RY HALEI
Sbjct: 44 GKDNLNQLYRRISPVGDPKVSIVPILDQWIEEGKSVNKDQLQVFIKELRYCKRYTHALEI 103
Query: 111 SEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGA 170
S WM + F L+ D A R+DLM+KV GI E+YFE +P K E Y ALL+ YA A
Sbjct: 104 SMWMSDKRYFALTSRDVAIRLDLMSKVLGIEQAEKYFENVPQKLKVLEVYNALLNCYAYA 163
Query: 171 KWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 230
K +KAE + + ++ + L YN M+ L+ G +K+ ++ E++ + D FT
Sbjct: 164 KSVDKAEAVMQNMRDLGFAGKTLTYNVMLNLHYQTGNFKKLEALMLEMEENGIAYDRFTL 223
Query: 231 NLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 290
+ +S+ AA +I +++K + M D+ DW Y + N Y A L++ L ++
Sbjct: 224 GIQLSAYAAICDIQRMEKIMSRMESDANVVTDWCNYAIVANGYRKAG-LMDKALEMLKKS 282
Query: 291 EKSIT-QRQWITYDFLI 306
E IT +++ Y+FL+
Sbjct: 283 EGLITGKKRSSAYNFLL 299
>gi|302143278|emb|CBI21839.3| unnamed protein product [Vitis vinifera]
Length = 501
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 176/334 (52%), Gaps = 7/334 (2%)
Query: 58 LKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTH 117
L RI + PK S + ++ +W+ EG + +L+ +++ ++ +R+ HALEIS+WM
Sbjct: 24 LYDRIQAVRDPKASISPLLNQWIEEGQTVSKPQLQSLVRIMKDFRRFHHALEISQWMTDR 83
Query: 118 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 177
+ F L+ SD A R+DL++ V G E YF +P + KTS Y ALL Y K EKAE
Sbjct: 84 RYFTLTPSDAAIRLDLISMVHGRVQAESYFNNIPNNLKTSSAYGALLSGYVREKSVEKAE 143
Query: 178 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY-NLWISS 236
+++++ + + ++ YN ++ LY G K+ +++E++ K + D FT NL ++
Sbjct: 144 ATMQKMREMDFATSSFPYNMLINLYSQTGNHGKIEALIQEMQSKAIPCDAFTVRNLMVAY 203
Query: 237 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA-ESSTLVEAEKSIT 295
AA+ +I ++KFL+ M D S DW Y + Y+ + A E +E+ +
Sbjct: 204 VAAS-DISAMEKFLNRMEEDPHISVDWNIYSVAASGYLKVGLIDKALEMLKKIESNRPHL 262
Query: 296 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 355
+R + FL+ LYA G+K ++ ++W + + + Y C+++ L ++ +
Sbjct: 263 ER-LSAFKFLLSLYARTGHKQELYRVWNLYKPSYE--YPEAYSCMITCLTKLDDIEGAEK 319
Query: 356 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
I +W+ T +D NRLL A+ L +KA
Sbjct: 320 IFQEWECECTM-YDFRVLNRLLSAYCKRCLFDKA 352
>gi|357140786|ref|XP_003571944.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Brachypodium distachyon]
Length = 497
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 175/337 (51%), Gaps = 7/337 (2%)
Query: 56 DDLKSRIFRISLPKRSATNVIQRWV-SEGNQATVSELRHILKELRKSQRYKHALEISEWM 114
D L R+ +++P+ T V+++W +E EL+ I+K+L + +R+ HALE+S WM
Sbjct: 35 DSLYHRVAAVAIPRLQLTPVLEQWAFAEDRPVEKHELQAIIKKLIRLRRFSHALEMSMWM 94
Query: 115 VTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE 174
+ F L D A R++L++KV G+ S YF GL K S+ Y +LL YA AK+ E
Sbjct: 95 TDRRYFPLKPGDVAYRLELISKVHGLKSAVEYFGGLSKEIKKSQCYGSLLKCYAEAKFVE 154
Query: 175 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 234
+AE+ F +++ + ++ YN MM LY GQVEKV + ++ + PD+FT ++ +
Sbjct: 155 EAEKFFGEMQEMGM-MSSYPYNVMMKLYWETGQVEKVRTMYRAMEESGIKPDLFTIDILL 213
Query: 235 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 294
+ A+ +++ +++ L E + W Y + + ++ A L L E+EK I
Sbjct: 214 TVYKASGDLEGIEEVL-EKAKPRENLVGWHSYAIVASAFMKAG-LQGKALQALQESEKRI 271
Query: 295 TQRQW-ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 353
+ + Y FL+ + A G + ++D+IW + +K + Y+C +S+ L + E
Sbjct: 272 DPKNGRVAYGFLLSMCADSGMRSEVDRIWDVYK-SKVPTCNSMYMCRISALLKMNDTDEA 330
Query: 354 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 390
+ +W +S D N LL + GL EKA
Sbjct: 331 EKAFREW-ESRFVHHDFRLINLLLNGYCAEGLMEKAE 366
>gi|359485373|ref|XP_003633265.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Vitis vinifera]
Length = 461
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 176/334 (52%), Gaps = 7/334 (2%)
Query: 58 LKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTH 117
L RI + PK S + ++ +W+ EG + +L+ +++ ++ +R+ HALEIS+WM
Sbjct: 24 LYDRIQAVRDPKASISPLLNQWIEEGQTVSKPQLQSLVRIMKDFRRFHHALEISQWMTDR 83
Query: 118 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 177
+ F L+ SD A R+DL++ V G E YF +P + KTS Y ALL Y K EKAE
Sbjct: 84 RYFTLTPSDAAIRLDLISMVHGRVQAESYFNNIPNNLKTSSAYGALLSGYVREKSVEKAE 143
Query: 178 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY-NLWISS 236
+++++ + + ++ YN ++ LY G K+ +++E++ K + D FT NL ++
Sbjct: 144 ATMQKMREMDFATSSFPYNMLINLYSQTGNHGKIEALIQEMQSKAIPCDAFTVRNLMVAY 203
Query: 237 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA-ESSTLVEAEKSIT 295
AA+ +I ++KFL+ M D S DW Y + Y+ + A E +E+ +
Sbjct: 204 VAAS-DISAMEKFLNRMEEDPHISVDWNIYSVAASGYLKVGLIDKALEMLKKIESNRPHL 262
Query: 296 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 355
+R + FL+ LYA G+K ++ ++W + + + Y C+++ L ++ +
Sbjct: 263 ER-LSAFKFLLSLYARTGHKQELYRVWNLYKPSYE--YPEAYSCMITCLTKLDDIEGAEK 319
Query: 356 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
I +W+ T +D NRLL A+ L +KA
Sbjct: 320 IFQEWECECTM-YDFRVLNRLLSAYCKRCLFDKA 352
>gi|115436132|ref|NP_001042824.1| Os01g0301700 [Oryza sativa Japonica Group]
gi|14495231|dbj|BAB60950.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113532355|dbj|BAF04738.1| Os01g0301700 [Oryza sativa Japonica Group]
gi|125525550|gb|EAY73664.1| hypothetical protein OsI_01547 [Oryza sativa Indica Group]
gi|125570062|gb|EAZ11577.1| hypothetical protein OsJ_01442 [Oryza sativa Japonica Group]
gi|215713519|dbj|BAG94656.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 504
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 169/323 (52%), Gaps = 5/323 (1%)
Query: 67 LPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSD 126
LP + RW+ E + ++ ++ RK ++ KHAL++ +WM + L
Sbjct: 51 LPSGGMVEELGRWLRERRPLSEEQVLFCVRRFRKFKQNKHALQLMDWMEA-RGVNLELKH 109
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQS 186
+A R+DL++K+ GIH+ E YF LP ++ +TY+ LL+ YA + EK EL+E +K
Sbjct: 110 HALRLDLVSKLNGIHAAEEYFGSLPDIFRSKQTYSTLLNCYAEHRMAEKGLELYENMKAM 169
Query: 187 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 246
N+ + L+YN +M LY+ Q EK+ V +++ + P+ F+Y + S +I+
Sbjct: 170 NIVSDILVYNNLMCLYLKTDQPEKIPTTVVKMQESGIQPNKFSYFVLTESYIMMNDIESA 229
Query: 247 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI 306
+K L E+ S W Y L N Y AE TL +AE+ + + ++ L+
Sbjct: 230 EKVLKELQ--EVNSVPWSLYATLANGYNKLQQFDKAE-FTLKKAEEVLDKHDVFSWHCLL 286
Query: 307 ILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATS 366
YA GN ++ +IW+SL+ +K T+R+Y+ +L + L + +I +W +S+
Sbjct: 287 SHYANSGNLSEVKRIWESLKSAFKKCTNRSYLVMLKALKKLDDFDTLQQIFQEW-ESSHE 345
Query: 367 DFDISACNRLLGAFSDVGLTEKA 389
+D+ N ++ A+ D G+ +KA
Sbjct: 346 HYDMKIPNIIIQAYLDKGMVDKA 368
>gi|297851240|ref|XP_002893501.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339343|gb|EFH69760.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 667
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 172/321 (53%), Gaps = 6/321 (1%)
Query: 75 VIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLM 134
V+++W +GNQ S +R I+K+LR S + AL++SEWM K L D+A R+ L+
Sbjct: 47 VLEQWRQQGNQVNPSHVRVIIKKLRDSDQSLQALQVSEWMSKEKICNLIPEDFAARLHLI 106
Query: 135 TKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE-KAEELFERVKQSNLSFNAL 193
V G+ E++FE +P +A+ YT LL+ YA + T KAE F+++++ L
Sbjct: 107 ENVVGLEEAEKFFESIPKNARDDSVYTTLLNWYARSDKTLCKAEATFQKMRELGLLSRPS 166
Query: 194 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
YN MM+LY+++ EKV ++ E+K +V D T N + +A ++ ++KFL++
Sbjct: 167 PYNAMMSLYIALNDREKVEELLREMKDNDVEADSITVNNVLKLYSAVCDVTAMEKFLNKW 226
Query: 254 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI--TYDFLIILYAG 311
+G +W+ +++ Y+ A N ++ ++ + + R+ + YD L+ LY
Sbjct: 227 EGINGIKLEWLTTLDMAKAYLRARS--NGKAIKMLRLTEELADRKSLKSAYDHLMKLYGE 284
Query: 312 LGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDIS 371
GN++++ +IW +M + ++ Y ++ S L + + EI W +S + +FDI
Sbjct: 285 AGNREEVLRIWNLYKMNIGQRDNKGYRTVIRSLLKVDDIFGAEEIYKVW-ESLSLEFDIR 343
Query: 372 ACNRLLGAFSDVGLTEKANEF 392
L + + G+TEKA +
Sbjct: 344 IPTMLASGYRERGMTEKAEKL 364
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 80/146 (54%), Gaps = 5/146 (3%)
Query: 70 RSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYAT 129
+ T ++++W G+Q S+L+ ++K LR S ++ AL++SEWM + L DYA
Sbjct: 377 KPVTPLLEQW---GDQMKPSDLKCLIKNLRDSNQFSKALQVSEWMGEKRVCDLYSEDYAA 433
Query: 130 RIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGA--KWTEKAEELFERVKQSN 187
R+ L V G+ E+YFE +P + K Y ALL YA + EE+ ++++N
Sbjct: 434 RLYLTENVLGLEKAEKYFENIPENMKDYSVYVALLSSYAKSDKNLENMVEEILREMEENN 493
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVAL 213
+ +++ N ++ +Y + +VE + +
Sbjct: 494 VDPDSITVNYVLKVYAAASKVEAMEM 519
>gi|115436130|ref|NP_001042823.1| Os01g0301500 [Oryza sativa Japonica Group]
gi|57899055|dbj|BAD87829.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113532354|dbj|BAF04737.1| Os01g0301500 [Oryza sativa Japonica Group]
gi|222618277|gb|EEE54409.1| hypothetical protein OsJ_01440 [Oryza sativa Japonica Group]
Length = 484
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 184/367 (50%), Gaps = 12/367 (3%)
Query: 33 RFLSSGSSQNECLDEETSNSDGKDD---LKSRIFRI--SLPKRSATNVIQRWVSEGNQAT 87
RFL++G+ E + + + GK D L R+ + + + S + V+ WV EG +
Sbjct: 18 RFLTTGAEAAEAVAPHAARAKGKKDKRPLGRRLLELGDAAGEGSVSRVLDEWVREGREEA 77
Query: 88 VS--ELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGER 145
++ +L ++L K +R HALE+ +WMV K ++ + YA ++L+ V+GI + E
Sbjct: 78 IAAADLAKCARDLHKVKRDAHALELMDWMVNTKGMSMTYARYALHLELLYSVYGIEAAEE 137
Query: 146 YFEGLP--LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM 203
YF G+P + TY ALL+ Y AK EKA ++ R+ + + + + N +M LY+
Sbjct: 138 YFSGIPSFTRDQNHRTYGALLNCYCSAKMEEKATNIYRRMDELGIPSSTKLMNNLMGLYL 197
Query: 204 SVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW 263
+GQ KVA + +E+K +NV PD T + + S AA ID VK+ MS W
Sbjct: 198 ELGQHSKVANLFDEMKERNVQPDELTCCILMRSHAAHNKIDTVKETFYNMSL-LDVPKQW 256
Query: 264 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 323
+ L +IY+ A + AE + + E + FL+ +A +GN ++++WK
Sbjct: 257 SIFRTLGSIYMNAGMVEEAELAFMRAQEFLGFDHGRHPFYFLMRQFASIGNLRGVNRVWK 316
Query: 324 SLRMT-KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSD 382
++MT T+ +Y+ +L LG + EI +W + ++D N L A
Sbjct: 317 DIKMTFSYNRTNFSYLLMLQCLYKLGDTDRMKEIYKEW-EYRYENYDPRLTNMLTRAHLR 375
Query: 383 VGLTEKA 389
G+T +A
Sbjct: 376 NGMTNEA 382
>gi|222637397|gb|EEE67529.1| hypothetical protein OsJ_24995 [Oryza sativa Japonica Group]
Length = 491
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 177/352 (50%), Gaps = 20/352 (5%)
Query: 58 LKSRIFRISLPKRSATNVIQRWVSE-GNQATVSELRHILKELRKSQRYKHALEISEWMVT 116
L+S ++ + P I+RW ++ GN+ LRH+ EL + +SEWM
Sbjct: 65 LQSTLWPLGHPGTLLVPEIERWAAKPGNR-----LRHV--ELERI--------VSEWMNA 109
Query: 117 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKA 176
D+A +DL+ ++ G + E YF LP KT + Y ALL+ Y EK+
Sbjct: 110 KGHVKFLPKDHAVHLDLIGEIHGSSAAETYFNNLPDKDKTEKPYGALLNCYTRELLVEKS 169
Query: 177 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 236
F+++K+ F+ L YN +M LY ++GQ EKV V+ E+K +VPD F+Y + I+S
Sbjct: 170 LAHFQKMKELGFVFSTLPYNNIMGLYTNLGQHEKVPSVIAEMKSNGIVPDNFSYRICINS 229
Query: 237 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 296
+ ++ L+EM C+ DW Y + + YI + + S L +AE I
Sbjct: 230 YGTRADFFGMENTLEEMECEPKIVVDWNTYAVVASNYIKGN-IREKAFSALKKAEAKINI 288
Query: 297 RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK-QKMTSRNYICILSSYLMLGHLKEVGE 355
+ +Y+ LI LY LG+K +++++W +L+M+ + +++Y +L+ + L ++E
Sbjct: 289 KDSDSYNHLISLYGHLGDKSEVNRLW-ALQMSNCNRHINKDYTTMLAVLVKLNEIEEAEV 347
Query: 356 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
++ +W+ S + FD N LL + L +KA L+K P + S
Sbjct: 348 LLKEWESSGNA-FDFQVPNVLLTGYRQKDLLDKAEALLDDFLKKGKMPPSTS 398
>gi|356547012|ref|XP_003541912.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20710, mitochondrial-like [Glycine max]
Length = 482
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 184/343 (53%), Gaps = 9/343 (2%)
Query: 58 LKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTH 117
L++ +F+ P S + ++ +WV EG + T +L + L +S+R+ HAL++ EWM
Sbjct: 24 LENGVFKNGDPLSSVSPILNQWVEEGREVTKLQLEDLAYRLTQSRRFTHALQVLEWMSNE 83
Query: 118 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 177
+ + LS A +I+L++KV G+ ERYF G+P + Y ALL YA K E+AE
Sbjct: 84 RNYELSPGSIAKQINLISKVHGLEQAERYFRGIPDDKIEFKIYAALLRCYAEHKSVEEAE 143
Query: 178 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 237
+ + +K+ + N M+ LY G+ EK+ +++E+K K++ + TY + +++
Sbjct: 144 AVMKXIKELHPVNITPCCNMMLELYAKKGKYEKLDRLMQEMKEKDIC-NASTYTIRLNAY 202
Query: 238 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE---KSI 294
+I ++K L +M D + DW Y+ N Y H + L ++E +
Sbjct: 203 VVVTDIKGMEKLLMQMEADPVATVDWYTYMTAANGYRRV-HNFEKVAEMLKKSEHLARGN 261
Query: 295 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 354
T+R + ++ + +YA +GNKD++ ++W ++ + +K + +YI +LSS L +
Sbjct: 262 TRR--LAFESIQTMYAIIGNKDEVYRLW-NMCTSLKKPNNSSYIRMLSSLAKLDEIDGAE 318
Query: 355 EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 397
+I+++W +S ++FD+ N ++ A+ G +KA + LL
Sbjct: 319 KILEEW-ESKYANFDVRIPNLMISAYCKWGQFDKAEAYIRRLL 360
>gi|358344191|ref|XP_003636175.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
gi|355502110|gb|AES83313.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
Length = 790
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 159/293 (54%), Gaps = 5/293 (1%)
Query: 105 KHALEISEWMVTHKE-FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTAL 163
+H L++ +WM E F +S SD A ++DL+ +V G+ S E +F L K TY AL
Sbjct: 292 EHVLQVYDWMNNRPERFRISASDVAIQLDLIARVHGVSSAESFFLNLTNDLKDKRTYGAL 351
Query: 164 LHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNV 223
L+ Y ++ EKAE L E ++ ++L +N MMTL M++ +KV ++V E+K KN+
Sbjct: 352 LNAYVHSRSREKAESLLEVMRSKRYLTHSLPFNLMMTLSMNLKDYDKVDMLVSEMKEKNI 411
Query: 224 VPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAE 283
DI+TYN+W+SSC + +I+++++ ++M D +W + + +YI L
Sbjct: 412 QLDIYTYNIWLSSCGSQGSIEKMEQVFEQMLKDPTIIPNWSTFSTMAAMYIKM-ELFEKA 470
Query: 284 SSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSS 343
L +AE I R + + +L+ LY +GNKD++ ++W + + + + Y ++SS
Sbjct: 471 QECLKKAEGRILGRDKVPFHYLLSLYGSVGNKDEVYRVWNNYKSMFPSIPNLGYHAVISS 530
Query: 344 YLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF--HM 394
++ + ++ ++ ++W SD D N L+ + G ++K F HM
Sbjct: 531 FVRMDDIERAEKLYEEWVSVRPSD-DSRIGNLLISWYLKKGKSDKVFSFFKHM 582
>gi|449457725|ref|XP_004146598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 227
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 122/199 (61%)
Query: 55 KDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWM 114
KD+L RI + P S T ++ +WV EG ELRHI+KELR +R+KHALEIS+WM
Sbjct: 28 KDNLYRRISPVGDPNISVTPLLDQWVLEGRLVQQDELRHIIKELRVYKRFKHALEISKWM 87
Query: 115 VTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE 174
+ F LS +D A R++L+ +V G+ E YF+ +P K + + ALL+ YA K +
Sbjct: 88 SDKRYFPLSTADIAIRMNLILRVHGLEQVEDYFDNMPSQLKRYQVHIALLNCYAHEKCVD 147
Query: 175 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 234
KA +++K+ + + L YN MM LY +G+ E++ +++E+K + V D FTY++ I
Sbjct: 148 KANAFMQKIKEMGFANSPLPYNIMMNLYHQIGEFERLDSLLKEMKERGVYYDRFTYSIRI 207
Query: 235 SSCAATLNIDQVKKFLDEM 253
S+ AA + ++K +++M
Sbjct: 208 SAYAAASDFRGIEKIMEQM 226
>gi|22165052|gb|AAM93669.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432900|gb|AAP54476.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125575303|gb|EAZ16587.1| hypothetical protein OsJ_32059 [Oryza sativa Japonica Group]
Length = 545
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 182/353 (51%), Gaps = 11/353 (3%)
Query: 56 DDLKSRIFRISLPKRSATNVIQRW-VSEGNQATVSELRHILKELRKSQRYKHALEISEWM 114
D L R+ + P+ + V+++W ++E E++ I+K L + +R+ AL++S WM
Sbjct: 81 DSLFRRVAAAADPRLPLSPVLEQWCLAEERPIAKPEIQSIIKYLCRRRRFSQALQLSMWM 140
Query: 115 VTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE 174
LS D A R++L+TKV G+ YF+ +P K + Y +LL YA AK E
Sbjct: 141 TERLHLHLSPGDVAYRLELITKVHGLDRAVEYFDSMPDQLKQQQCYGSLLKCYAEAKCVE 200
Query: 175 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 234
KAEELFE+++ ++ ++ YN MM LY+ GQVE+V + ++ +V D+FT + +
Sbjct: 201 KAEELFEKMRGMGMA-SSYAYNVMMRLYLQDGQVERVHSMHRTMEESGIVADVFTTDTLV 259
Query: 235 SSCAATLNIDQVKKFLDEM-SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 293
++ +I+ ++K L++ +C+ + W Y + + + S + E+EK
Sbjct: 260 AAYVVAEDIEAIEKVLEKADTCNDLMT--WHSYATIGKV-LMQSGMEERALQAFQESEKK 316
Query: 294 ITQR-QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN--YICILSSYLMLGHL 350
I ++ + Y FL+ +YA LG ++D+IW + +K ++ N Y+C +S L + +
Sbjct: 317 IAKKSNRVAYGFLLTMYADLGMNSEVDRIWDVYK-SKVPASACNSMYMCRISVLLKMNDI 375
Query: 351 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
+ ++W +S D N LL A+ GL EKA ++K P
Sbjct: 376 VGAEKAYEEW-ESKHVYHDSRLINLLLTAYCKEGLMEKAEALVDQFVKKGRTP 427
>gi|218188053|gb|EEC70480.1| hypothetical protein OsI_01546 [Oryza sativa Indica Group]
Length = 484
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 183/367 (49%), Gaps = 12/367 (3%)
Query: 33 RFLSSGSSQNECLDEETSNSDGKDD---LKSRIFRI--SLPKRSATNVIQRWVSEGNQAT 87
RFL++G+ E + + + GK D L R+ + + + S + V+ WV EG +
Sbjct: 18 RFLTTGAEAAEAVAPHAARAKGKKDKRPLGRRLLELGDAAGEGSVSRVLDEWVREGREEA 77
Query: 88 VS--ELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGER 145
++ +L ++L K +R HALE+ +WMV K ++ + YA ++L+ V+GI + E
Sbjct: 78 IAAADLAKCARDLHKVKRDAHALELMDWMVNTKGMSMTYARYALHLELLYSVYGIEAAEE 137
Query: 146 YFEGLP--LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM 203
YF G+P + TY ALL+ Y AK EKA ++ R+ + + + + N +M LY+
Sbjct: 138 YFSGIPSFTRDQNHRTYGALLNCYCSAKMEEKATNIYRRMDELGIPSSTKLMNNLMGLYL 197
Query: 204 SVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW 263
+GQ K A + +E+K +NV PD T + + S AA ID VK+ MS W
Sbjct: 198 ELGQHSKAANLFDEMKERNVQPDELTCCILMRSHAAHNKIDTVKETFYNMSL-LDVPKQW 256
Query: 264 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 323
+ L +IY+ A + AE + + E + FL+ +A +G+ ++++WK
Sbjct: 257 SIFRTLGSIYMNAGMVEEAELAFMRAQEFLGFDHGRHPFYFLMRQFASIGSLRGVNRVWK 316
Query: 324 SLRMT-KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSD 382
++MT T+ +Y+ +L LG + EI +W + ++D N L A
Sbjct: 317 DIKMTFSYNRTNFSYLLMLQCLYKLGDTDRMKEIYKEW-EYRYENYDPRLTNMLTRAHLR 375
Query: 383 VGLTEKA 389
G+T +A
Sbjct: 376 NGMTNEA 382
>gi|195613552|gb|ACG28606.1| tetratricopeptide-like helical [Zea mays]
gi|414870858|tpg|DAA49415.1| TPA: tetratricopeptide-like helical [Zea mays]
Length = 517
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 171/335 (51%), Gaps = 5/335 (1%)
Query: 56 DDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMV 115
D+L RI + P + V+++W EG+ A ++ I+K+L +R+ HALE+S WM
Sbjct: 40 DELYRRIMNVGRPSIPLSPVLEQWNQEGHTAKKFVIQAIVKKLVGLRRFAHALELSFWMT 99
Query: 116 THKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEK 175
+ LS D A R+DL++KV G+ YF +P + + Y +LL Y AK +K
Sbjct: 100 DRRHLHLSVGDVAYRLDLISKVHGLEKAVEYFGMVPKQLRKPQCYGSLLKCYVEAKAVDK 159
Query: 176 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
AEE F ++++ ++ ++ Y MM LY+ GQ+E+V + ++++ K V PD F+ ++
Sbjct: 160 AEEHFAKMQEMGMT-SSYAYTWMMKLYLQTGQLERVHAMFQDMEEKGVKPDTFSVEAMLA 218
Query: 236 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 295
+ A ++ V K LD+ + W + + ++++ + V A + LVEAE+ I+
Sbjct: 219 AYIAAEDVQGVGKVLDKANPHEKLV-TWHGHASAASLFMKSGMQVGAVMA-LVEAERRIS 276
Query: 296 QR-QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 354
+ I Y FL+ Y LG + +IW S+ +K + Y+ LS+ L +
Sbjct: 277 PKSSRIAYAFLLKTYTELGMHAEAGRIW-SVYKSKVPPCNTMYMSRLSALLRTNDIDGAE 335
Query: 355 EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
+ +W+ D N ++ A+ GL EKA
Sbjct: 336 ATLKEWETVPLRYHDFRLINVMVDAYCREGLVEKA 370
>gi|255553777|ref|XP_002517929.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542911|gb|EEF44447.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 446
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 167/328 (50%), Gaps = 6/328 (1%)
Query: 60 SRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKE 119
SRI + PK S V+ +WV+EGN + LR ++ ++ R+ HAL+IS+WM
Sbjct: 12 SRIVNLKDPKASVIPVLDQWVNEGNTVRKALLRSLVNLMKGFNRFNHALQISQWMADRPN 71
Query: 120 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEEL 179
LS SD R++L+ +++G E+YFE LP K E Y ALL Y KAE +
Sbjct: 72 LTLSPSDVVVRLELVHRIYGSAHAEKYFEKLPDKFKCREVYCALLSGYVQESSVRKAEAI 131
Query: 180 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 239
E ++ ++ + YN ++ LY G EK+ ++++E++ VV +T + +++ A
Sbjct: 132 MEEMRAKGMANSCFPYNLLINLYPKNGDYEKINMLIQEMETNGVVRGAYTMSNLMAAYVA 191
Query: 240 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT-QRQ 298
NI +++ L+++ D +DW Y + Y+ L+ + L + E + +++
Sbjct: 192 ASNISGMERILNQIEKDPQLGNDWRVYSVAASGYLKFG-LIEKALTMLRKLEDVMPLEKK 250
Query: 299 WITYDFLIILYAGLGNKDKIDQIWKSLR-MTKQKMTSRNYICILSSYLMLGHLKEVGEII 357
+D L+ LY G +D++ +W + + + + K TS + ++SS L +K +I
Sbjct: 251 TSAFDILVTLYGKTGKRDELYLVWNTYKPLIELKETS--VMTMISSLSKLDDIKGAEKIF 308
Query: 358 DQWKQSATSDFDISACNRLLGAFSDVGL 385
+W +S +D N LL A+ GL
Sbjct: 309 REW-ESQCMMYDFRVLNTLLFAYCRKGL 335
>gi|296086986|emb|CBI33242.3| unnamed protein product [Vitis vinifera]
Length = 335
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 137/269 (50%), Gaps = 37/269 (13%)
Query: 54 GKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEW 113
GK L ++I + P S + WV GN+ V+EL+ I+ +LRK +R+ ALEISEW
Sbjct: 37 GKISLYNKISPLGDPNTSVVPELDNWVQNGNKVWVAELQRIIHDLRKRKRFSQALEISEW 96
Query: 114 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 173
M S +++A ++DL+ +V G S E YF L KT +TY ALL+ Y + T
Sbjct: 97 MSKKGICAFSPTEHAVQLDLIGRVRGFLSAESYFNSLQNHDKTDKTYGALLNCYVRQRQT 156
Query: 174 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 233
+K+ +++K+ + + L YN++M LY +VGQ EKV V+ E+K+ NV PD F+Y +
Sbjct: 157 DKSLSHLQKMKEMGFASSPLTYNDIMCLYTNVGQHEKVPDVLTEMKQSNVYPDNFSYRIC 216
Query: 234 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 293
I+S A +I ++ L EM E+
Sbjct: 217 INSYGAQSDIQGMENVLKEM-------------------------------------ERQ 239
Query: 294 ITQRQWITYDFLIILYAGLGNKDKIDQIW 322
R + Y+ LI LYA LGNK ++ ++W
Sbjct: 240 PHIRDGLGYNHLISLYASLGNKAEVLRLW 268
>gi|42570837|ref|NP_973492.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|119935915|gb|ABM06033.1| At2g20710 [Arabidopsis thaliana]
gi|330251966|gb|AEC07060.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 395
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 154/287 (53%), Gaps = 4/287 (1%)
Query: 114 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 173
M H+ +S+ D A R+DL+ KV G+ E++FE +P+ + Y ALL+ YA K
Sbjct: 1 MSEHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVL 60
Query: 174 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 233
KAE++F+ +K+ L YN M+ LY+ G+ V ++ E++ + V PDIFT N
Sbjct: 61 HKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTR 120
Query: 234 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 293
+ + + +++ ++KFL D G DW Y + N YI A L L ++E+
Sbjct: 121 LHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAG-LTEKALEMLRKSEQM 179
Query: 294 I-TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 352
+ Q++ Y+ L+ Y G K+++ ++W SL + YI ++S+ L + ++E
Sbjct: 180 VNAQKRKHAYEVLMSFYGAAGKKEEVYRLW-SLYKELDGFYNTGYISVISALLKMDDIEE 238
Query: 353 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 399
V +I+++W ++ S FDI + L+ + G+ EKA E +L+QK
Sbjct: 239 VEKIMEEW-EAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQK 284
>gi|326533934|dbj|BAJ93740.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 167/314 (53%), Gaps = 6/314 (1%)
Query: 76 IQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMT 135
+ RW+ E +L +++LR ++++ ALE+ +WM +L D+A R+DL+
Sbjct: 58 LDRWLCERKPLCGHQLLFYVRKLRNFRQHRRALELMDWMEARGANLLP-GDHALRLDLIC 116
Query: 136 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 195
V G+ + E YF LP K+ +TY++LLH YA K EKA EL+E+++ N+ N L+Y
Sbjct: 117 TVNGLEAAEEYFLSLPDMYKSVKTYSSLLHCYAEHK-AEKALELYEKMRTMNIVPNTLVY 175
Query: 196 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 255
+M+LY+ GQ EK+ EE++ V D FTY + S ++ +KFL+++
Sbjct: 176 KNLMSLYLKTGQPEKILQTFEEMRANGVRTDNFTYYMLTESHIMLNGLESTEKFLEDL-- 233
Query: 256 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 315
+ W Y L + Y A TL +AE+ + + + + L+ LYA GN
Sbjct: 234 EKSIPVHWSLYTRLADSYNKVGQFDKA-GLTLKKAEEVMDRGEMFAWHNLLSLYASSGNL 292
Query: 316 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNR 375
++ ++W SLR + ++R+Y+ +LS+ L + ++ +W+ + S +D+ N
Sbjct: 293 SEVKRVWSSLRSELKISSNRSYLVMLSALKKLDDFDCMQQVFQEWELTQES-YDMRIPNV 351
Query: 376 LLGAFSDVGLTEKA 389
++ A+ +T++A
Sbjct: 352 MIKAYLAKDMTDEA 365
>gi|242039187|ref|XP_002466988.1| hypothetical protein SORBIDRAFT_01g017960 [Sorghum bicolor]
gi|241920842|gb|EER93986.1| hypothetical protein SORBIDRAFT_01g017960 [Sorghum bicolor]
Length = 510
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 172/335 (51%), Gaps = 5/335 (1%)
Query: 56 DDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMV 115
D+L RI + P + V+++W EG+ ++ I+K+L +R+ HALE+S WM
Sbjct: 43 DNLYRRIMNVGRPSIPLSPVLKQWDQEGHTVKKFVIQAIVKKLVGLRRFAHALELSFWMT 102
Query: 116 THKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEK 175
+ L+ D A R+DL++KV G+ YF +P + + Y +LL Y AK +K
Sbjct: 103 DRRHLHLTAGDVAYRLDLISKVHGLEKAVEYFGMVPKRLRMPQCYGSLLKCYVEAKAVDK 162
Query: 176 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
AEE F ++++ + ++ Y MM LY+ GQ+E+V + ++++ K V PD F+ ++
Sbjct: 163 AEEHFAKMQEMGMK-SSYTYTSMMKLYLETGQLERVHAMFQDMEEKGVKPDTFSVESMLA 221
Query: 236 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 295
+ A +++ V K LD+ + W ++++ + V A + L+EAE+ I+
Sbjct: 222 AYIAAEDVEGVGKVLDKANPHEKLV-KWHGQALAASLFMKSGMQVRAVMA-LLEAERRIS 279
Query: 296 QR-QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 354
+ I Y FL+ Y LG ++ +IW S+ +K ++ Y+ +S+ L + +
Sbjct: 280 PKSSRIAYAFLLKTYTDLGMYPEVGRIW-SVYKSKVPPSNTMYLSRISALLKMNDIDGAE 338
Query: 355 EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
+ +W+ + D N ++ A+ GL EKA
Sbjct: 339 ATLKEWETVSLRYHDFRLINLMVDAYCREGLVEKA 373
>gi|193806501|sp|Q9C7F1.2|PPR61_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g28020
Length = 566
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 169/323 (52%), Gaps = 10/323 (3%)
Query: 75 VIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLM 134
V+++W +GNQ S +R I+K+LR S + AL++SEWM K L D+A R+ L+
Sbjct: 55 VLEQWRQQGNQVNPSHVRVIIKKLRDSDQSLQALQVSEWMSKEKICNLIPEDFAARLHLI 114
Query: 135 TKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE-KAEELFERVKQSNLSFNAL 193
V G+ E++FE +P +A+ YT+LL+ YA + T KAE F++++ L +
Sbjct: 115 ENVVGLEEAEKFFESIPKNARGDSVYTSLLNSYARSDKTLCKAEATFQKMRDLGLLLRPV 174
Query: 194 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
YN MM+LY ++ EKV ++ E+K +V D T N + +A ++ +++KFL++
Sbjct: 175 PYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSAVCDVTEMEKFLNKW 234
Query: 254 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWIT-YDFLIILYAGL 312
G +W +++ Y+ A A L E+ + Q+ + YD L+ LY
Sbjct: 235 EGIHGIKLEWHTTLDMAKAYLRARSSGKA-MKMLRLTEQLVDQKSLKSAYDHLMKLYGEA 293
Query: 313 GNKDKIDQIWKSLRMTKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQWKQSATSDFD 369
GN++++ ++WK + K K+ R+ Y ++ S L + + EI W +S +FD
Sbjct: 294 GNREEVLRVWK---LYKSKIGERDNNGYRTVIRSLLKVDDIVGAEEIYKVW-ESLPLEFD 349
Query: 370 ISACNRLLGAFSDVGLTEKANEF 392
L + D G+TEKA +
Sbjct: 350 HRIPTMLASGYRDRGMTEKAEKL 372
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 80/146 (54%), Gaps = 5/146 (3%)
Query: 70 RSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYAT 129
+ T ++++W G+Q S+L+ ++K LR S+++ AL++SEWM + L DYA
Sbjct: 385 KPVTPLLEQW---GDQMKPSDLKCLIKNLRDSKQFSKALQVSEWMGEKQVCNLYLEDYAA 441
Query: 130 RIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGA--KWTEKAEELFERVKQSN 187
R+ L V G+ E+YFE +P + K Y ALL YA + +E+ ++++N
Sbjct: 442 RLYLTENVLGLEEAEKYFENIPENMKDYSVYVALLSSYAKSDKNLGNMVDEILREMEENN 501
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVAL 213
+ + + N ++ +Y + +++ + +
Sbjct: 502 VDPDLITVNHVLKVYAAESKIQAMEM 527
>gi|15217811|ref|NP_174123.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|12322989|gb|AAG51479.1|AC069471_10 hypothetical protein [Arabidopsis thaliana]
gi|332192782|gb|AEE30903.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 169/323 (52%), Gaps = 10/323 (3%)
Query: 75 VIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLM 134
V+++W +GNQ S +R I+K+LR S + AL++SEWM K L D+A R+ L+
Sbjct: 55 VLEQWRQQGNQVNPSHVRVIIKKLRDSDQSLQALQVSEWMSKEKICNLIPEDFAARLHLI 114
Query: 135 TKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE-KAEELFERVKQSNLSFNAL 193
V G+ E++FE +P +A+ YT+LL+ YA + T KAE F++++ L +
Sbjct: 115 ENVVGLEEAEKFFESIPKNARGDSVYTSLLNSYARSDKTLCKAEATFQKMRDLGLLLRPV 174
Query: 194 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
YN MM+LY ++ EKV ++ E+K +V D T N + +A ++ +++KFL++
Sbjct: 175 PYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSAVCDVTEMEKFLNKW 234
Query: 254 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWIT-YDFLIILYAGL 312
G +W +++ Y+ A A L E+ + Q+ + YD L+ LY
Sbjct: 235 EGIHGIKLEWHTTLDMAKAYLRARSSGKA-MKMLRLTEQLVDQKSLKSAYDHLMKLYGEA 293
Query: 313 GNKDKIDQIWKSLRMTKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQWKQSATSDFD 369
GN++++ ++WK + K K+ R+ Y ++ S L + + EI W +S +FD
Sbjct: 294 GNREEVLRVWK---LYKSKIGERDNNGYRTVIRSLLKVDDIVGAEEIYKVW-ESLPLEFD 349
Query: 370 ISACNRLLGAFSDVGLTEKANEF 392
L + D G+TEKA +
Sbjct: 350 HRIPTMLASGYRDRGMTEKAEKL 372
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 80/146 (54%), Gaps = 5/146 (3%)
Query: 70 RSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYAT 129
+ T ++++W G+Q S+L+ ++K LR S+++ AL++SEWM + L DYA
Sbjct: 385 KPVTPLLEQW---GDQMKPSDLKCLIKNLRDSKQFSKALQVSEWMGEKQVCNLYLEDYAA 441
Query: 130 RIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGA--KWTEKAEELFERVKQSN 187
R+ L V G+ E+YFE +P + K Y ALL YA + +E+ ++++N
Sbjct: 442 RLYLTENVLGLEEAEKYFENIPENMKDYSVYVALLSSYAKSDKNLGNMVDEILREMEENN 501
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVAL 213
+ + + N ++ +Y + +++ + +
Sbjct: 502 VDPDLITVNHVLKVYAAESKIQAMEM 527
>gi|255553773|ref|XP_002517927.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542909|gb|EEF44445.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 507
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 169/329 (51%), Gaps = 4/329 (1%)
Query: 58 LKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTH 117
L RI + PK S V+ +WVSEG+ + L+ ++ ++ +R+ HALE+S WM
Sbjct: 50 LYDRIQIVRDPKESIIPVLNQWVSEGHTVGKALLQSLVHLMKGYKRFNHALEMSHWMTDC 109
Query: 118 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 177
+ F LS SD A R++L+ +V+G E YFE + K+ Y ALL Y +KAE
Sbjct: 110 RYFSLSPSDVAVRLELIYRVYGSAHAEMYFEKISDKLKSGNVYGALLSGYVRENSVQKAE 169
Query: 178 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 237
+ + +++ ++ ++ YN M+ LY G EK+ ++ EE++R + D +T +++
Sbjct: 170 AVLQEMREKGIATSSFPYNIMINLYAQNGAFEKIDILKEEMERNGIPQDKYTMRNLMAAY 229
Query: 238 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT-Q 296
A +I +++ L+++ W Y + Y+ L+ L + E+++
Sbjct: 230 VAASDISGMERILNQLETHPQLGHGWQAYSVAASGYLKVG-LIEKALKMLRKMEETMPIG 288
Query: 297 RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 356
++ +++L+ LYA G KD++ ++W S + + + + C++SS + ++ I
Sbjct: 289 KKTSAFNYLLTLYAKTGRKDELYRVWNSYKPLAE-VKETQFCCMISSLEKVDDIEGAERI 347
Query: 357 IDQWKQSATSDFDISACNRLLGAFSDVGL 385
++W +S +D N+LL A+ GL
Sbjct: 348 FEEW-ESQCMMYDFRVLNKLLLAYCRKGL 375
>gi|326507912|dbj|BAJ86699.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 173/334 (51%), Gaps = 7/334 (2%)
Query: 58 LKSRIFRISLPKRSATNV--IQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMV 115
L RI ++S K T + W+ + + + ++ ++EL + ++ + ALE+ +WM
Sbjct: 51 LYKRISKVSQGKPPGTVAAEMDEWLRQRRRPSQLQVLAYVRELTRFKKNESALELLDWME 110
Query: 116 THKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEK 175
+ + LS A R+DL++KV GI + E YF +P +K+ +TY+ LL+ Y K
Sbjct: 111 S-RGANLSPGHQAMRLDLISKVHGIQAAEEYFWSIPDISKSVKTYSCLLNCYGKHGLAYK 169
Query: 176 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
E +E++K ++ + L+YN +M LY GQ EK+ EE++ + D F Y I
Sbjct: 170 GLEFYEKMKAKSIVPDKLVYNYLMILYQKAGQPEKILSTFEEMRESGISADKFAYFTLIE 229
Query: 236 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 295
S ++D +K L E+ W Y + N YI AE + + +AE+ +
Sbjct: 230 SYITMNDLDAAEKVLAEL--QKVAPVHWSLYTLMANNYIKLKLFGKAEVA-IKKAEEGMD 286
Query: 296 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 355
+ ++ L+ L+A GN ++ ++WKSL+ T +K +R+Y+ +L + M+ + + +
Sbjct: 287 KADLRSWYALLSLHAHCGNSTEVKRVWKSLKSTFKKCLNRSYLVMLQALSMIDDFESLQQ 346
Query: 356 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
I +W QS+ +D N ++ A+ D G+ ++A
Sbjct: 347 IFQEW-QSSHEHYDKRIANVVIKAYLDKGMIDEA 379
>gi|357142115|ref|XP_003572464.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01990,
mitochondrial-like [Brachypodium distachyon]
Length = 546
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 167/325 (51%), Gaps = 5/325 (1%)
Query: 76 IQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMT 135
+ +W+ E + +L +++LR + YK ALE+ +WM + L +A R+ L+
Sbjct: 105 LDQWLRERRPLSEQQLFSYVRKLRSYRHYKRALELMDWMEA-RGASLQLGHHAVRLGLVC 163
Query: 136 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 195
KV G+ + E YF LP K+ +TY++LL+ YA + +K ELFE++K N++ + L+Y
Sbjct: 164 KVNGLEAAEEYFWSLPEMFKSIKTYSSLLNCYAEHRKADKGLELFEKMKAMNITPSTLVY 223
Query: 196 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 255
N +M LY+ Q EK+ E+++ +V D FTY + S ++ +KF++E+
Sbjct: 224 NNLMDLYLKTDQPEKIPTTFEQMRENHVRTDSFTYYMLTQSYIMVNDLKSAEKFVEEL-- 281
Query: 256 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 315
+ W Y L N Y + A L +AE+ + + + + L+ LYA GN
Sbjct: 282 EKSTPVPWSLYTVLANNYNKLAQFDKA-VLALKKAEEVMDRSEISAWHNLLSLYASSGNS 340
Query: 316 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNR 375
++ ++W+SL+ K +R+Y+ +LS+ L + ++ +W +S +D+ N
Sbjct: 341 SEVKRVWESLKSAFTKCINRSYLVMLSALKKLDDFDSLQQLFQEW-ESTHERYDMRITNV 399
Query: 376 LLGAFSDVGLTEKANEFHMLLLQKN 400
++ A+ +T++A + K
Sbjct: 400 MIEAYLAKDMTDEAEALRQTAMAKG 424
>gi|125575304|gb|EAZ16588.1| hypothetical protein OsJ_32060 [Oryza sativa Japonica Group]
Length = 475
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 155/287 (54%), Gaps = 10/287 (3%)
Query: 107 ALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHL 166
+ +S WM + LS D A R++L++KV G+ YF+ +P + + Y +LL
Sbjct: 63 GIPLSMWMTERRHLHLSPGDVAYRLELISKVHGLDKAVEYFDAVPNQLRELQCYGSLLRC 122
Query: 167 YAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPD 226
YA A+ EKAEELFE ++ ++ N+ YN MM LY +GQVE+V + + ++ +VPD
Sbjct: 123 YAEAERVEKAEELFENMRGMGMA-NSYAYNAMMNLYSQIGQVERVDSMYKAMEEGGIVPD 181
Query: 227 IFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESST 286
IFT + +S+ A +++ ++K L++ SC++ S W + + +++ A A +
Sbjct: 182 IFTIDNLVSAYADVEDVEAIEKVLEKASCNNLMS--WHSFAIVGKVFMKAGMQERALQA- 238
Query: 287 LVEAEKSITQRQ--WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN--YICILS 342
E+EK IT R+ + Y FL+ +YA L ++D+IW R +K ++ N Y+C +S
Sbjct: 239 FQESEKRITARKDGRVAYGFLLTMYADLQMDSEVDRIWDVYR-SKVPASACNTMYMCRIS 297
Query: 343 SYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
L + + + ++W +S D N LL A+ GL EKA
Sbjct: 298 VLLKMNDIVGAEKAYEEW-ESKHVYHDSRLINILLTAYCKEGLMEKA 343
>gi|125559056|gb|EAZ04592.1| hypothetical protein OsI_26742 [Oryza sativa Indica Group]
Length = 402
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 149/283 (52%), Gaps = 4/283 (1%)
Query: 126 DYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQ 185
D+A +DL+ ++ G + E YF LP KT + Y ALL+ Y EK+ F+++K+
Sbjct: 13 DHAVHLDLIGEIHGSSAAETYFNNLPDKDKTEKPYGALLNCYTRELLVEKSLAHFQKMKE 72
Query: 186 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 245
F+ L YN +M LY ++GQ EKV V+ E+K +VPD F+Y + I+S +
Sbjct: 73 LGFVFSTLPYNNIMGLYTNLGQHEKVPSVIAEMKSNGIVPDNFSYRICINSYGTRADFFG 132
Query: 246 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFL 305
++ L+EM C+ DW Y + + YI + + S L +AE I + +Y+ L
Sbjct: 133 MENTLEEMECEPKIVVDWNTYAVVASNYIKGN-IREKAFSALKKAEAKINIKDSDSYNHL 191
Query: 306 IILYAGLGNKDKIDQIWKSLRMTK-QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
I LY LG+K +++++W +L+M+ + +++Y +L+ + L ++E ++ +W+ S
Sbjct: 192 ISLYGHLGDKSEVNRLW-ALQMSNCNRHINKDYTTMLAVLVKLNEIEEAEVLLKEWESSG 250
Query: 365 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
+ FD N LL + L +KA L+K P + S
Sbjct: 251 NA-FDFQVPNVLLTGYRQKDLLDKAEALLDDFLKKGKMPPSTS 292
>gi|414877074|tpg|DAA54205.1| TPA: hypothetical protein ZEAMMB73_351899 [Zea mays]
Length = 613
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 177/377 (46%), Gaps = 39/377 (10%)
Query: 65 ISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSD 124
+ P+ T+ +++W +GN EL ++L LRK + Y ALE+ E++ + L +
Sbjct: 153 LEAPRHQVTSALEKWAKDGNALDRGELYYVLLNLRKRKWYHKALELVEYVQNSQLLELGE 212
Query: 125 SDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVK 184
DYA R+DL KV+G+H E+Y E +P S ++ Y LL +K+E++F R+K
Sbjct: 213 RDYAARVDLTAKVYGLHKAEQYIEKIPASHRSEVVYRTLLANCVAEGNVKKSEQVFNRMK 272
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
N+++ LY + + +K+A V+ +++++V P IFTY + + + +++
Sbjct: 273 DLGFPVTTFSSNQLLLLYKRLDK-KKIADVLTMMEKEDVKPSIFTYKVLVDAKGMVGDVE 331
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA-EKSITQRQWITYD 303
++K ++ M D G D + YI AE TL+E+ E Q+
Sbjct: 332 AMEKVVESMVKD-GIEPDLTFNATIARQYIFNGQRDKAE--TLLESMEGDDIQKNRAACK 388
Query: 304 FLIILYAGLGNKDKIDQIWK----SLRMTK----------------------------QK 331
FL+ LYA LGN D +++IWK + R+ + +
Sbjct: 389 FLLPLYAFLGNGDAVERIWKVCEDNTRIDECLSAIDAFGKLGNVEKAEKVFEDMFVKWKN 448
Query: 332 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 391
++S+ Y +L Y +L + GE + + + F N L+ ++D G EKA
Sbjct: 449 LSSKYYTALLKVYAN-QNLLDKGEELAKRMDEEGAKFGTPTLNALVKLYADAGEVEKAES 507
Query: 392 -FHMLLLQKNCAPTNAS 407
H L L+ N P+ +S
Sbjct: 508 LLHKLSLKNNVKPSYSS 524
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 3/126 (2%)
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAK--TSETYTALLHLYAGAKWTEKAEELFERVKQSNL 188
ID K+ + E+ FE + + K +S+ YTALL +YA +K EEL +R+ +
Sbjct: 423 IDAFGKLGNVEKAEKVFEDMFVKWKNLSSKYYTALLKVYANQNLLDKGEELAKRMDEEGA 482
Query: 189 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK-NVVPDIFTYNLWISSCAATLNIDQVK 247
F N ++ LY G+VEK ++ ++ K NV P +Y + S + ++ +
Sbjct: 483 KFGTPTLNALVKLYADAGEVEKAESLLHKLSLKNNVKPSYSSYMTLLDSYSKKGDVHNSE 542
Query: 248 KFLDEM 253
K +++
Sbjct: 543 KVFNKL 548
>gi|223949005|gb|ACN28586.1| unknown [Zea mays]
Length = 396
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 140/282 (49%), Gaps = 2/282 (0%)
Query: 126 DYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQ 185
D+A +DL+ ++ G+ + E YF L KT + Y ALL+ Y +KA F +K+
Sbjct: 13 DHAIHLDLIGQIHGVEAAETYFNNLSDKDKTEKPYGALLNCYTRELLVDKALAHFRNMKE 72
Query: 186 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 245
F+ L YN++M LY +GQ E+V V+ E+K +VPD F+Y + I+S +
Sbjct: 73 LGFVFSTLPYNDLMGLYTRIGQHERVPSVMAEMKSNGIVPDNFSYRICINSYGTRADFFG 132
Query: 246 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFL 305
++ L+EM C+ DW Y + + YI L S L +AE + ++ Y L
Sbjct: 133 LENTLEEMECEPQIVVDWNTYAVVASNYIKGD-LREKAYSALSKAEAKLDKQDPDAYRHL 191
Query: 306 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 365
I LY LG+K + ++W ++ +R+Y+ +LS + L + E +++ +W+ S
Sbjct: 192 ISLYGNLGDKSEAKRLWAVQMSNCKRYINRDYMNMLSVLVKLDEITEAEDLLKEWESSQN 251
Query: 366 SDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
S FD N LL + L +KA L+K P + S
Sbjct: 252 S-FDFRVPNVLLTGYRQKALLDKAEMLLDGFLKKGKTPPSTS 292
>gi|168063926|ref|XP_001783918.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664548|gb|EDQ51263.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 448
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 165/325 (50%), Gaps = 3/325 (0%)
Query: 68 PKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDY 127
P++S +I+ W++EG L IL LR+ QRYK A+EIS+WM K +D
Sbjct: 1 PQKSVVPLIKEWLNEGYALDKRVLVSILIRLRRRQRYKQAMEISDWMSEEKNIKWEMADN 60
Query: 128 ATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN 187
RIDL K+ E+ E P KT Y LL YA + +KA+ L E++K +
Sbjct: 61 IVRIDLKAKMKQFAVAEQLLEDSPPEFKTELAYHTLLRNYADYQMAQKADALLEKLKGTG 120
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 247
+ +N+MM LY G + KV ++ ++K V D++TYN+ + A + +I+ ++
Sbjct: 121 ILTLPFAFNQMMLLYKRKGMMNKVTEILADMKTHGVPKDVYTYNILMDVKARSGDIEGME 180
Query: 248 KFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLII 307
K +E+S D D + L + A L++ S L E E+ R YD LI
Sbjct: 181 KIFEELSADENVKADAATFGTLATFCVHAG-LLDKARSYLKEMEEGDVFRNRSAYDILIS 239
Query: 308 LYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSD 367
Y +G+++ ++++W+ ++ + +++R+YI ++ ++ LG +++ E+ +S
Sbjct: 240 QYGAVGDQEGVERVWEKVK-SGPVVSNRSYITVIEAFGKLGMVEKAEELYGIMSKSKGLI 298
Query: 368 FDISACNRLLGAFSDVGLTEKANEF 392
N LL A++ GL EKA +
Sbjct: 299 LS-RQFNSLLSAYARQGLMEKAEKL 322
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 67/135 (49%), Gaps = 11/135 (8%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
++ +Y ++ + EKAEEL+ + +S + +N +++ Y G +EK +V
Sbjct: 264 SNRSYITVIEAFGKLGMVEKAEELYGIMSKSKGLILSRQFNSLLSAYARQGLMEKAEKLV 323
Query: 216 EEI----KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS--GGSDDWVK-YVN 268
E++ ++KN V TY+ ++ T +D+ + E DS G S WV+ ++
Sbjct: 324 EDMVKLGRKKNAV----TYHHLVTGYLKTDQLDKALAVMKEAQGDSKQGRSRLWVETLIS 379
Query: 269 LVNIYITASHLVNAE 283
+++ Y +++AE
Sbjct: 380 VLDAYAERGDVISAE 394
>gi|359497206|ref|XP_002262853.2| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Vitis vinifera]
Length = 494
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 154/303 (50%), Gaps = 4/303 (1%)
Query: 102 QRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYT 161
QR + IS+WM + L D A R++L+ KV G+ E YF + + KT + Y
Sbjct: 94 QRLRDLGFISQWMSDKRYIPLMPRDIALRMNLILKVHGLEQVENYFNNIHKNLKTYQVYI 153
Query: 162 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 221
ALL+ YA K +KAE + +R++ AL YN +M +Y +G EK+ +++ E++ K
Sbjct: 154 ALLNCYALEKSVDKAEAIMQRLRDLGFVRTALGYNTLMNVYYRMGNWEKLDILMHEMEEK 213
Query: 222 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 281
+ D FT + +S+ AA NI + + M D DW Y + + Y+ LV+
Sbjct: 214 GIFCDKFTLAIRLSAYAAASNIVGIDNIVTRMESDPRIILDWNSYAVVAHGYLKVG-LVD 272
Query: 282 AESSTLVEAEKSITQR-QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICI 340
+ + E+ I + + +D L+ LYA +D++D++W L K+K+ ++ Y+ +
Sbjct: 273 KTLVMMKKLEELIDAKGSNVAFDNLLKLYAETRQRDELDRVW-MLYKKKEKIYNKGYMAM 331
Query: 341 LSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKN 400
+SS L + +++++W+ S +D N L+ A+ GLTEKA +L K
Sbjct: 332 ISSLLKFDDIDAAEKVLEEWESRRLS-YDFRVPNFLIDAYCRKGLTEKAEALVNKILTKG 390
Query: 401 CAP 403
P
Sbjct: 391 GNP 393
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 20/179 (11%)
Query: 109 EISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYA 168
+IS+WM + L D A R++L+ KV G+ E YF + + KT + Y ALL+ YA
Sbjct: 22 KISQWMSDKRYIPLMPRDIALRMNLILKVHGLEQVENYFNNIHKNLKTYQVYIALLNCYA 81
Query: 169 GAKWTEKAEELFERVK--------QSNLSFNALMYNEM---MTLYMSVGQVEKVALVVEE 217
K +KAE + +R++ S+ + LM ++ M L + V +E+V E
Sbjct: 82 LEKSVDKAEAIMQRLRDLGFISQWMSDKRYIPLMPRDIALRMNLILKVHGLEQV-----E 136
Query: 218 IKRKNVVPDIFTYNLWIS--SC-AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
N+ ++ TY ++I+ +C A ++D+ + + + D G + Y L+N+Y
Sbjct: 137 NYFNNIHKNLKTYQVYIALLNCYALEKSVDKAEAIMQRLR-DLGFVRTALGYNTLMNVY 194
>gi|6958202|gb|AAF32491.1|AF091837_1 DNA-binding protein [Triticum aestivum]
Length = 612
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 173/351 (49%), Gaps = 21/351 (5%)
Query: 59 KSRIFRISL--PKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVT 116
+S + ++ L P+ + +++W+ GN S++ +++ LRK + Y AL++ EW+
Sbjct: 145 QSPLLKVMLEAPRNGVSGTLKKWLDGGNTFDRSDIFYVIMNLRKRKFYFKALQLLEWLED 204
Query: 117 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKA 176
K L + DYA+R+DL+ KV G++ E+Y + +P+S + Y LL +K+
Sbjct: 205 SKVIDLGERDYASRLDLVAKVHGVYKAEKYIDSIPISHRGEIVYRTLLANCVSEANVKKS 264
Query: 177 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 236
EE+F ++K N+++ LY V + +K+A V+ +++++NV P +FTY L + +
Sbjct: 265 EEVFNKMKDLGFPVTVFAINQLLLLYKRVDK-KKIADVLAKMEKENVKPSLFTYKLLVDT 323
Query: 237 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 296
A +I ++K ++ M + G D + + YI A H AE + L E +
Sbjct: 324 KGAIRDIAGMEKVVESMQAE-GVEPDLLFQATIAKHYIFAGHREKAE-AILESMEGGDIK 381
Query: 297 RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICI--LSSYLMLGHLKEVG 354
L+ LYA LG KD ++++W+ + R C+ + S+ LG ++
Sbjct: 382 GNRNACKILLPLYAFLGKKDDVERMWQVC-----EANPRLDECLSAIESFGRLGDVERAE 436
Query: 355 EIIDQ----WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 401
++ + WK ++ + N L+ ++D L +K E + + C
Sbjct: 437 KVFEDMFATWKTLSSKFY-----NALMKVYADQNLFKKGKELAKRMDEDGC 482
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 74/153 (48%), Gaps = 4/153 (2%)
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKT--SETYTALLHLYAGAKWTEKAEELFERVKQSNL 188
I+ ++ + E+ FE + + KT S+ Y AL+ +YA +K +EL +R+ +
Sbjct: 423 IESFGRLGDVERAEKVFEDMFATWKTLSSKFYNALMKVYADQNLFKKGKELAKRMDEDGC 482
Query: 189 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN-VVPDIFTYNLWISSCAATLNIDQVK 247
+ ++ LY+ G+V+K ++ ++ + N + P +Y + + + + +I +
Sbjct: 483 RLGISTIDSLVKLYVGAGEVDKAESILHKLSKSNKMKPQYSSYLMLLDTYSKKGDIHNSE 542
Query: 248 KFLDEMSCDSGGSDDWVKYVNLVNIYITASHLV 280
K D++ G + +Y L+N Y+ A V
Sbjct: 543 KVFDQLR-QMGYNGRVRQYQLLLNAYVHAKTPV 574
>gi|125525413|gb|EAY73527.1| hypothetical protein OsI_01409 [Oryza sativa Indica Group]
Length = 611
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 166/337 (49%), Gaps = 13/337 (3%)
Query: 68 PKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDY 127
P+ ++W+++GN SEL ++L LRK + Y AL++ E++ K F L + DY
Sbjct: 154 PRVDVAGATKKWLNDGNTLERSELFYVLLSLRKRKLYTKALQLLEYVEESKLFDLGERDY 213
Query: 128 ATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN 187
A+R+DL+ KV GI+ E+Y E +P S + Y LL +K E++F ++K
Sbjct: 214 ASRVDLVAKVHGIYKAEKYIENVPASHRGEVVYRTLLANCVAIANVKKTEQVFNKMKDLG 273
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 247
N+++ LY V + +K+ V+ ++++NV P +FTY L + + AT +I+ ++
Sbjct: 274 FPVTVFSCNQLLLLYKRVDK-KKLGDVLTMMEKENVKPSLFTYKLLVDTKGATRDIEDME 332
Query: 248 KFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLII 307
K + M D G D + + YI + AE + L + E F++
Sbjct: 333 KVIQAMQAD-GIEPDLLIQATIARHYIFGGYREKAE-AILEQIEGDDINENRSACKFVLP 390
Query: 308 LYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICI--LSSYLMLGHLKEVGEIIDQ-WKQSA 364
LYA LG K +++IWK ++ +R C+ + ++ LG +++ EI + +K
Sbjct: 391 LYAFLGKKADVERIWKVC-----EVNARLDECMSAIEAFGKLGDVEKAEEIFENMFKTWK 445
Query: 365 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 401
T F+ N +L +++ L +K E + C
Sbjct: 446 TLSFEYY--NAMLKVYANKKLFDKGKELAKRMGDDGC 480
Score = 44.3 bits (103), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKT--SETYTALLHLYAGAKWTEKAEELFERVKQSNL 188
I+ K+ + E FE + + KT E Y A+L +YA K +K +EL +R+
Sbjct: 421 IEAFGKLGDVEKAEEIFENMFKTWKTLSFEYYNAMLKVYANKKLFDKGKELAKRMGDDGC 480
Query: 189 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 234
+ ++ LY G+VEK ++ ++ KN + ++T L +
Sbjct: 481 RLGPSTLDSLVKLYSDAGEVEKADSILHKLSYKNKIKPLYTTYLML 526
>gi|302788498|ref|XP_002976018.1| hypothetical protein SELMODRAFT_415910 [Selaginella moellendorffii]
gi|300156294|gb|EFJ22923.1| hypothetical protein SELMODRAFT_415910 [Selaginella moellendorffii]
Length = 603
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 167/336 (49%), Gaps = 15/336 (4%)
Query: 57 DLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVT 116
+L +RIF S ++V+ +W EG TVS + ++ L+ S R HALE+ EW+V
Sbjct: 151 ELLARIFACK-KDESMSSVLDKWKEEGKDLTVSMIVTVINRLKNSNRMAHALEMIEWVVD 209
Query: 117 ---HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 173
+K+F L+ S ++++ + GI + E+ FE L KT Y ALL Y
Sbjct: 210 EPDYKDFKLARS---FQLEITARSKGIAAAEKLFEELSAEEKTRPVYNALLTRYVFLHNV 266
Query: 174 EKAEELFERVKQSN-LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 232
+KAE LFE + ++ LS + N MM LY G K ++E+ K V P+IFTYN+
Sbjct: 267 KKAEGLFEEMDKAGFLSQSPFALNLMMKLYKHKGDNAKFQEMLEKAKDVAVEPNIFTYNV 326
Query: 233 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 292
+ A +++ ++K +EM + D Y L Y+ A AE S L+ E
Sbjct: 327 MLDLKAKAGDVEGMEKIFEEMKLNPNAKPDGTSYFTLCKGYLKAGLTDKAEVS-LLRMEV 385
Query: 293 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 352
+R T++++++ Y LG ++++W+ +M + +++ + + G ++
Sbjct: 386 GPFRRTKATFEYMMLAYGQLGLISDVERMWQKCKMVPGDGFN-SFLAFQRAMALAGEVQR 444
Query: 353 VGEI---IDQWKQSATSDFDISACNRLLGAFSDVGL 385
V + +D+WK+S T D+ N LL A+ G+
Sbjct: 445 VDSMFKHMDKWKRSKT--VDLKRHNNLLLAYYKKGM 478
>gi|226530081|ref|NP_001147602.1| DNA-binding protein [Zea mays]
gi|195612448|gb|ACG28054.1| DNA-binding protein [Zea mays]
Length = 622
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 162/332 (48%), Gaps = 15/332 (4%)
Query: 65 ISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSD 124
+ P+ T+ +++W +GN EL ++L LRK Y ALE+ EW+ + F +
Sbjct: 162 LEAPRHQVTSALEKWAKDGNAFDRGELYYVLLNLRKRHWYSKALELVEWVQKSQLFEFVE 221
Query: 125 SDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVK 184
DYA +DL KV+G+H E+ E +P S + Y LL A +K+E++F R+K
Sbjct: 222 RDYAAHLDLTAKVYGLHKAEQTIEKIPASCRGEIVYRTLLANCVSASNIKKSEQVFNRMK 281
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
+N+++ LY + + +K+A V+ +++++V P +FTY + + + + +I+
Sbjct: 282 DLGFPVTQFSFNQLLLLYKRLDR-KKIADVLAMMEKEDVKPSLFTYKILVDAKGSVGDIE 340
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 304
++K ++ M DS D + YI AE + L E Q+
Sbjct: 341 AMEKVIESMEKDS-IEPDLTFNATIARHYIFYGQREKAE-ALLKAMEGDDIQKNRAACKT 398
Query: 305 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID----QW 360
L+ L+A LGN D +++IWK+ + S + + ++ LG +++ ++ + W
Sbjct: 399 LLPLHAFLGNSDAVERIWKACEDNTRVAES---VSAIEAFGKLGDVEKAEKVFEDMLVHW 455
Query: 361 KQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
K + +S F N LL ++D L +K E
Sbjct: 456 K-TLSSKF----YNALLKVYADHNLLDKGKEL 482
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 90/188 (47%), Gaps = 18/188 (9%)
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKT--SETYTALLHLYAGAKWTEKAEELFERVKQSNL 188
I+ K+ + E+ FE + + KT S+ Y ALL +YA +K +EL +R+ ++ +
Sbjct: 432 IEAFGKLGDVEKAEKVFEDMLVHWKTLSSKFYNALLKVYADHNLLDKGKELAKRMDENRV 491
Query: 189 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIF-TYNLWISSCAATLNIDQVK 247
F A + ++ LY+ G+VEK +V ++ +N + I+ TY + S + ++ +
Sbjct: 492 RFGAPTLDALVKLYVEAGEVEKAESLVHKLSIQNHIKPIYNTYMTLLDSYSKKGDVRNSE 551
Query: 248 KFLDEMSCDSGGSDDWVKYVNLVNIYITASH--------------LVNAESSTLVEAEKS 293
K +++ SG + Y +L++ Y+ A N+ STL+ A
Sbjct: 552 KVFNKLR-QSGYTGRIRMYQSLLHAYVHAKAPAYGFRERMKADNIFPNSAVSTLIAATDP 610
Query: 294 ITQRQWIT 301
+++ I+
Sbjct: 611 FVKKKSIS 618
>gi|413946863|gb|AFW79512.1| DNA-binding protein [Zea mays]
Length = 622
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 162/332 (48%), Gaps = 15/332 (4%)
Query: 65 ISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSD 124
+ P+ T+ +++W +GN EL ++L LRK Y ALE+ EW+ + F +
Sbjct: 162 LEAPRHQVTSALEKWAKDGNAFDRGELYYVLLNLRKRHWYSKALELVEWVQKSQLFEFVE 221
Query: 125 SDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVK 184
DYA +DL KV+G+H E+ E +P S + Y LL A +K+E++F R+K
Sbjct: 222 RDYAAHLDLTAKVYGLHKAEQTIEKIPASCRGEIVYRTLLANCVSASNIKKSEQVFNRMK 281
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
+N+++ LY + + +K+A V+ +++++V P +FTY + + + + +I+
Sbjct: 282 DLGFPVTQFSFNQLLLLYKRLDR-KKIADVLAMMEKEDVKPSLFTYKILVDAKGSVGDIE 340
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 304
++K ++ M DS D + YI AE + L E Q+
Sbjct: 341 AMEKVIESMEKDS-IEPDLTFNATIARHYIFYGQREKAE-ALLKAMEGDDIQKNRAACKT 398
Query: 305 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID----QW 360
L+ L+A LGN D +++IWK+ + S + + ++ LG +++ ++ + W
Sbjct: 399 LLPLHAFLGNSDAVERIWKACEDNTRVAES---VSAIEAFGKLGDVEKAEKVFEDMLVHW 455
Query: 361 KQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
K + +S F N LL ++D L +K E
Sbjct: 456 K-TLSSKF----YNALLKVYADHNLLDKGKEL 482
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 77/149 (51%), Gaps = 4/149 (2%)
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKT--SETYTALLHLYAGAKWTEKAEELFERVKQSNL 188
I+ K+ + E+ FE + + KT S+ Y ALL +YA +K +EL +R+ ++ +
Sbjct: 432 IEAFGKLGDVEKAEKVFEDMLVHWKTLSSKFYNALLKVYADHNLLDKGKELAKRMDENRV 491
Query: 189 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIF-TYNLWISSCAATLNIDQVK 247
F A + ++ LY+ G+VEK +V ++ +N + I+ TY + S + ++ +
Sbjct: 492 RFGAPTLDALVKLYVEAGEVEKAESLVHKLSIQNHIKPIYNTYMTLLDSYSKKGDVRNSE 551
Query: 248 KFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
K +++ SG + Y L++ Y+ A
Sbjct: 552 KVFNKLR-QSGYTGRIRMYQVLLHAYVRA 579
>gi|56783681|dbj|BAD81093.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|56784204|dbj|BAD81589.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|125569936|gb|EAZ11451.1| hypothetical protein OsJ_01319 [Oryza sativa Japonica Group]
Length = 611
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 165/337 (48%), Gaps = 13/337 (3%)
Query: 68 PKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDY 127
P+ ++W+++GN SEL ++L LRK + Y AL++ E++ K F L + DY
Sbjct: 154 PRVDVAGATKKWLNDGNTLERSELFYVLLSLRKRKLYTKALQLLEYVEESKLFDLGERDY 213
Query: 128 ATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN 187
A+R+DL+ KV GI+ E+Y E +P S + Y LL +K E++F ++K
Sbjct: 214 ASRVDLVAKVHGIYKAEKYIENVPASHRGEVVYRTLLANCVAIANVKKTEQVFNKMKDLG 273
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 247
N+++ LY V + +K+ V+ ++++NV P +FTY L + + A +I+ ++
Sbjct: 274 FPVTVFSCNQLLLLYKRVDK-KKLGDVLTMMEKENVKPSLFTYKLLVDTKGAARDIEDME 332
Query: 248 KFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLII 307
K + M D G D + + YI + AE + L + E F++
Sbjct: 333 KVIQAMQAD-GIEPDLLIQATIARHYIFGGYREKAE-AILEQIEGDDINENRSACKFVLP 390
Query: 308 LYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICI--LSSYLMLGHLKEVGEIIDQ-WKQSA 364
LYA LG K +++IWK ++ +R C+ + ++ LG +++ EI + +K
Sbjct: 391 LYAFLGKKADVERIWKVC-----EVNARLDECMSAIEAFGKLGDVEKAEEIFENMFKTWK 445
Query: 365 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 401
T F+ N +L +++ L +K E + C
Sbjct: 446 TLSFEYY--NAMLKVYANKKLFDKGKELAKRMGDDGC 480
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKTS--ETYTALLHLYAGAKWTEKAEELFERVKQSNL 188
I+ K+ + E FE + + KT E Y A+L +YA K +K +EL +R+
Sbjct: 421 IEAFGKLGDVEKAEEIFENMFKTWKTLSFEYYNAMLKVYANKKLFDKGKELAKRMGDDGC 480
Query: 189 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 234
+ ++ LY G+VEK ++ ++ KN + ++T L +
Sbjct: 481 RLGPSTLDSLVKLYSDAGEVEKADSILHKLSYKNKIKPLYTTYLML 526
>gi|356565994|ref|XP_003551220.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g60770-like [Glycine max]
Length = 469
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 152/318 (47%), Gaps = 41/318 (12%)
Query: 90 ELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEG 149
E+ LK+L + Y+ AL++SE M + + + D+A +DL+ K GI + + YF
Sbjct: 66 EVNDTLKKLDDRKLYQLALKLSETMA-KRNMIKTVRDHAIHLDLLAKARGITAAKNYFVN 124
Query: 150 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 209
LP SAK + A+L+ Y EKAE E++K+ +L +++ YN ++ LY VGQ E
Sbjct: 125 LPESAKNHLCHGAILNCYCKEPMIEKAEGFMEKMKELSLPLSSMPYNSLIMLYTKVGQPE 184
Query: 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
KV+ +++E+K N++ D +TYN+W+ + AA +I V++ DEM
Sbjct: 185 KVSSLIQEMKTSNIMLDSYTYNVWMRALAAVNDISSVERVHDEMMA-------------- 230
Query: 270 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
L E EK + Y FLI Y N ++ ++W+SLR+
Sbjct: 231 -----------------LTELEKRNAFKDLTAYQFLITFYGXTSNLYEVFRVWRSLRLAF 273
Query: 330 QKMTSRNYI----CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGL 385
K + +Y+ ++ S +LG K E + +DI N L+ A++ + +
Sbjct: 274 PKTANISYLNMIRVLVKSKDLLGEEKCFXE-----XECGCPTYDIRVVNVLIRAYAKLDM 328
Query: 386 TEKANEFHMLLLQKNCAP 403
EKA E ++ P
Sbjct: 329 LEKAEELKEHARRRGAKP 346
>gi|11138066|dbj|BAB17739.1| putative DNA-binding protein [Oryza sativa Japonica Group]
Length = 591
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 165/337 (48%), Gaps = 13/337 (3%)
Query: 68 PKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDY 127
P+ ++W+++GN SEL ++L LRK + Y AL++ E++ K F L + DY
Sbjct: 134 PRVDVAGATKKWLNDGNTLERSELFYVLLSLRKRKLYTKALQLLEYVEESKLFDLGERDY 193
Query: 128 ATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN 187
A+R+DL+ KV GI+ E+Y E +P S + Y LL +K E++F ++K
Sbjct: 194 ASRVDLVAKVHGIYKAEKYIENVPASHRGEVVYRTLLANCVAIANVKKTEQVFNKMKDLG 253
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 247
N+++ LY V + +K+ V+ ++++NV P +FTY L + + A +I+ ++
Sbjct: 254 FPVTVFSCNQLLLLYKRVDK-KKLGDVLTMMEKENVKPSLFTYKLLVDTKGAARDIEDME 312
Query: 248 KFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLII 307
K + M D G D + + YI + AE + L + E F++
Sbjct: 313 KVIQAMQAD-GIEPDLLIQATIARHYIFGGYREKAE-AILEQIEGDDINENRSACKFVLP 370
Query: 308 LYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICI--LSSYLMLGHLKEVGEIIDQ-WKQSA 364
LYA LG K +++IWK ++ +R C+ + ++ LG +++ EI + +K
Sbjct: 371 LYAFLGKKADVERIWKVC-----EVNARLDECMSAIEAFGKLGDVEKAEEIFENMFKTWK 425
Query: 365 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 401
T F+ N +L +++ L +K E + C
Sbjct: 426 TLSFEYY--NAMLKVYANKKLFDKGKELAKRMGDDGC 460
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKTS--ETYTALLHLYAGAKWTEKAEELFERVKQSNL 188
I+ K+ + E FE + + KT E Y A+L +YA K +K +EL +R+
Sbjct: 401 IEAFGKLGDVEKAEEIFENMFKTWKTLSFEYYNAMLKVYANKKLFDKGKELAKRMGDDGC 460
Query: 189 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 234
+ ++ LY G+VEK ++ ++ KN + ++T L +
Sbjct: 461 RLGPSTLDSLVKLYSDAGEVEKADSILHKLSYKNKIKPLYTTYLML 506
>gi|449479004|ref|XP_004155478.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 259
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 116/209 (55%)
Query: 55 KDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWM 114
+D L R++R P+ S V+ +WV EG Q S+L+ ++K+LR R+ HAL++ EW
Sbjct: 35 EDTLFRRVYRAGDPRTSIVRVLDQWVEEGRQVNQSDLQKLIKQLRTFGRFNHALQLCEWE 94
Query: 115 VTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE 174
+ S A ++ L++K G+ E YF + S++ + Y ALLH Y K +
Sbjct: 95 RNERNKCPSPGHIAIQLHLISKARGLEQAEEYFSSIGESSRDHKVYGALLHCYVENKNLK 154
Query: 175 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 234
KAE + +++++ L YN M+ LY +G+ EK+ +V+E++ + + FTYN+ +
Sbjct: 155 KAEAIMQKMREVGFMKTPLSYNAMLNLYAQLGKHEKLDELVKEMEEMGIGHNRFTYNVRM 214
Query: 235 SSCAATLNIDQVKKFLDEMSCDSGGSDDW 263
++ AA +I ++K L +M D + DW
Sbjct: 215 NAYAAASDITNMEKLLSKMEADPLVATDW 243
>gi|449506007|ref|XP_004162627.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 174/364 (47%), Gaps = 36/364 (9%)
Query: 68 PKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDY 127
P S + + +WVS+GN+ + ++ + LR+ Q ++ AL+ SEW+ + + ++ DY
Sbjct: 154 PDFSVASALVKWVSQGNKLSRDDISSTMISLRRRQMFRKALQFSEWLEANGQLEFNERDY 213
Query: 128 ATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN 187
A+R+ L+ KV G+H E Y +P S + + ALL Y A EKAEE+F ++K
Sbjct: 214 ASRVHLIAKVQGLHKAESYIAKIPKSFQGEVVHRALLANYVVANNVEKAEEVFNKIKDLE 273
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 247
+ YN+M+ LY + + K+A V+ ++++N+ P FTY + I + +I ++
Sbjct: 274 FPMSIFAYNQMLVLYKKIDR-RKIADVLLLMEKENIKPCPFTYKILIDGKGLSNDISGME 332
Query: 248 KFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLII 307
+ +D M + G D L Y++ V A++ E + QW+ L+
Sbjct: 333 QVVDSMKAE-GIELDVSTLSLLAKHYVSCGLKVKAKAILKEIEETNSNGPQWLC-RILLP 390
Query: 308 LYAGLGNKDKIDQIWKSL------------------------------RMTK--QKMTSR 335
Y L +D++ ++W+ R+ K +K+++R
Sbjct: 391 FYGKLQMEDEVRRLWEICEANPHIEECMAAIVAWGQLKNVQEAEKIFDRVVKTWKKLSAR 450
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 395
+Y +++ Y L + E+++Q +S D+ CN ++ + + G EKA+ F +
Sbjct: 451 HYSIMMNVYRDSKMLTKGKEVVNQMAESGCH-IDLLTCNAIVKLYVEAGEVEKADSFLVK 509
Query: 396 LLQK 399
++K
Sbjct: 510 AVKK 513
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV-ALV 214
++ Y+ ++++Y +K K +E+ ++ +S + L N ++ LY+ G+VEK + +
Sbjct: 448 SARHYSIMMNVYRDSKMLTKGKEVVNQMAESGCHIDLLTCNAIVKLYVEAGEVEKADSFL 507
Query: 215 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
V+ +K+ + P +Y + A ++ +K D+M
Sbjct: 508 VKAVKKYGMKPLFTSYKTLMDHYARRGDVHNAEKIFDKM 546
>gi|297842839|ref|XP_002889301.1| hypothetical protein ARALYDRAFT_477224 [Arabidopsis lyrata subsp.
lyrata]
gi|297335142|gb|EFH65560.1| hypothetical protein ARALYDRAFT_477224 [Arabidopsis lyrata subsp.
lyrata]
Length = 597
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 142/266 (53%), Gaps = 5/266 (1%)
Query: 60 SRIFR--ISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTH 117
S +F+ +S P S + + +WV EGN+ T E+ + +LR+ + Y AL++SEW+ +
Sbjct: 131 SELFKTIVSAPGLSIGSALDKWVEEGNEITRVEVAKAMLQLRRRRMYGRALQLSEWLEAN 190
Query: 118 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 177
K+ +++ DY++R+DL K+ G+ +GE Y + +P S K Y LL A +K+E
Sbjct: 191 KKIEMNERDYSSRLDLTVKIRGLENGEAYMQKIPKSFKGEVIYRTLLANCVAAGNVKKSE 250
Query: 178 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 237
+F R+K + ++M+ LY + + +K+A V+ ++++NV P + TY + I
Sbjct: 251 LVFNRMKDLGFPLSGFTCDQMLLLYKRIDR-KKIADVLLLMEKENVKPSLLTYKILIDVK 309
Query: 238 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 297
AT +I +++ L+ M D G D+ + L + + + L L E E +
Sbjct: 310 GATNDISGMEQILETMK-DEGVQPDF-QTQALTAKHYSGAGLKEKAEKVLKEMEGESLEA 367
Query: 298 QWITYDFLIILYAGLGNKDKIDQIWK 323
+ L+ +YA LG +D++ +IWK
Sbjct: 368 NRRAFKDLLSIYASLGREDEVTRIWK 393
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAK--TSETYTALLHLYAGAKWTEKAEELFERVKQSNL 188
I K+ + E FE + + +S TY+ LL +Y K K ++L +R+ +S
Sbjct: 408 IHAFGKLNKVQEAEAIFEKIVTMGRRASSNTYSVLLRVYVDHKMLSKGKDLVKRMAESGC 467
Query: 189 SFNALMYNEMMTLYMSVGQVEKV 211
A ++ ++ LY+ G+VEK
Sbjct: 468 RIEATTWDALIKLYVEAGEVEKA 490
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 99/232 (42%), Gaps = 28/232 (12%)
Query: 167 YAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPD 226
Y+GA EKAE++ + ++ +L N + +++++Y S+G+ ++V + + + K
Sbjct: 344 YSGAGLKEKAEKVLKEMEGESLEANRRAFKDLLSIYASLGREDEVTRIWKICESK----P 399
Query: 227 IFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESST 286
F +L LN Q + + E G Y L+ +Y+ H + ++
Sbjct: 400 YFDESLAAIHAFGKLNKVQEAEAIFEKIVTMGRRASSNTYSVLLRVYV--DHKMLSKGKD 457
Query: 287 LVE-AEKSITQRQWITYDFLIILYAGLGNKDKIDQIW-KSLRMTKQKMTSRNYICILSSY 344
LV+ +S + + T+D LI LY G +K D + K+ + + K+ +++ I+ Y
Sbjct: 458 LVKRMAESGCRIEATTWDALIKLYVEAGEVEKADSMLDKASKQSHTKLMMNSFMYIMDEY 517
Query: 345 LMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 396
G D+ ++ +VG T + +F LL
Sbjct: 518 SKRG--------------------DVHNTEKIFLKMREVGYTSRLRQFQALL 549
>gi|357131430|ref|XP_003567340.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Brachypodium distachyon]
Length = 612
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 167/341 (48%), Gaps = 22/341 (6%)
Query: 68 PKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDY 127
P + +++WV++GN S++ + LR+ + + AL++ EW+ K L + DY
Sbjct: 156 PWNDVSGTLKKWVNDGNTVDRSDVFFAVLNLRRRRFFSKALQLLEWLEESKLIELVERDY 215
Query: 128 ATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN 187
A+R+DLM KV GI+ E++ + +P S + Y LL +KAEE+F ++K
Sbjct: 216 ASRLDLMAKVHGIYKAEKFIDNIPASLRGEIVYRTLLANCVAEVNVKKAEEVFNKMKDLG 275
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 247
N+++ LY V + +K++ V+ +++++V P +FTY L + + A+ +I+ ++
Sbjct: 276 FPVTVFAINQLLLLYKRVDK-KKISDVLTMMEKEDVKPSLFTYKLLVDTKGASRDIEGME 334
Query: 248 KFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLII 307
K + M + G + D + + YI H AE+ ++E+ + + ++
Sbjct: 335 KVVQSMEAE-GITPDLLLQATIAKHYIFGGHREKAEA--ILESMEGDMKENRNACKMVMP 391
Query: 308 LYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV-------GEIIDQW 360
LYA LG KD +++IWK + +R C LS+ G L +V G + W
Sbjct: 392 LYAFLGKKDDVERIWKVC-----QSNTRLDEC-LSAIEAFGRLGDVEKAEEVFGNMFKTW 445
Query: 361 KQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 401
K ++ + N ++ +++ L +K E + + C
Sbjct: 446 KTLSSKYY-----NAMMRVYANQNLMDKGKELAKRMEEDGC 481
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKT--SETYTALLHLYAGAKWTEKAEELFERVKQSNL 188
I+ ++ + E F + + KT S+ Y A++ +YA +K +EL +R+++
Sbjct: 422 IEAFGRLGDVEKAEEVFGNMFKTWKTLSSKYYNAMMRVYANQNLMDKGKELAKRMEEDGC 481
Query: 189 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN-VVPDIFTYNLWISS 236
+ ++ LY+ G+VEK ++ ++ KN + P +Y + + S
Sbjct: 482 RLGISTLDSLVKLYVDAGEVEKAESLLHKLSVKNKMKPQYSSYLMLLDS 530
>gi|147766620|emb|CAN73943.1| hypothetical protein VITISV_032243 [Vitis vinifera]
Length = 448
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 166/334 (49%), Gaps = 20/334 (5%)
Query: 58 LKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTH 117
L RI + PK S + ++ +W+ EG + +L+ +++ ++ +R+ HALEIS+WM
Sbjct: 24 LYDRIQAVRDPKASISPLLNQWIEEGQTVSKPQLQSLVRIMKDFRRFHHALEISQWMTDR 83
Query: 118 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 177
+ F L+ SD A R+DL++ V P + + Y ALL Y K EKAE
Sbjct: 84 RYFTLTPSDAAIRLDLISMV-------------PWTXAGXDAYGALLSGYVREKSVEKAE 130
Query: 178 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY-NLWISS 236
+++++ + + ++ YN ++ LY G K+ +++E++ K + D FT NL ++
Sbjct: 131 ATMQKMREMDFATSSFPYNMLINLYSQTGNHGKIEALIQEMQXKAIPCDAFTVXNLMVAY 190
Query: 237 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA-ESSTLVEAEKSIT 295
AA+ +I ++K L+ M D S DW Y + Y+ + A E +E+ +
Sbjct: 191 VAAS-DISAMEKXLNRMEEDPHISVDWNIYSVAASGYLKVGLIDKALEMLKKIESNRPHL 249
Query: 296 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 355
+R + L+ LYA +K ++ ++W + + + Y C+++ L ++ +
Sbjct: 250 ERX-SAFKXLLSLYARTXHKQELYRVWNLYKPSYE--YPEAYSCMITCLTKLDDIEGAEK 306
Query: 356 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
I +W+ T +D NRLL A+ L +KA
Sbjct: 307 IFQEWECECTM-YDFRVLNRLLSAYCKRCLFDKA 339
>gi|302143279|emb|CBI21840.3| unnamed protein product [Vitis vinifera]
Length = 446
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 127/228 (55%), Gaps = 2/228 (0%)
Query: 49 TSNSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHAL 108
TSN+ K+ L+SRI + S +++W EG +L ++++LR +RY HAL
Sbjct: 29 TSNAP-KESLQSRISPAIDLRVSIVPALEQWRKEGRSIKQQDLHRLIRKLRTFKRYNHAL 87
Query: 109 EISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYA 168
EI EW+ F +S D A ++DL++KV G+ E+YF P S ++ + Y ALL+ Y+
Sbjct: 88 EIYEWIRDKFYFDISPGDVAIQLDLISKVHGLEQAEKYFNETPNSLRSFQVYGALLNCYS 147
Query: 169 GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIF 228
K EKAE + + ++ L YN M+ LY +G+ EK+ +++E++ + D F
Sbjct: 148 QKKSLEKAEAIMQEMRDMGF-VKTLSYNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSF 206
Query: 229 TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
TY + +++ AT +++ ++K L ++ D + DW Y+ N Y+ A
Sbjct: 207 TYCIRLNAYCATSDMEGMEKLLMKLETDPAVNSDWNAYIVAANGYLKA 254
>gi|125535921|gb|EAY82409.1| hypothetical protein OsI_37623 [Oryza sativa Indica Group]
Length = 611
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 164/340 (48%), Gaps = 19/340 (5%)
Query: 68 PKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDY 127
P+ +++W+++GN SEL ++L LR+ + Y AL++ E++ K L + DY
Sbjct: 154 PRVDVAGALKKWLNDGNTLDRSELFYVLLSLRRRKLYIKALQLLEYVEESKLIDLGERDY 213
Query: 128 ATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN 187
A+R+DL+ K I+ E+Y E +P S + Y LL +KAE++F ++K
Sbjct: 214 ASRVDLVAKTHSIYKAEKYIENVPASHRGEIVYRTLLANCVAIANVKKAEQVFNKMKDLG 273
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 247
+ N+++ LY V + +K+ V+ ++++NV P +FTY L + + A +I+ ++
Sbjct: 274 FPVSVFSCNQLLLLYKRVDK-KKLGDVLTMMEKENVKPSLFTYKLLVDTKGAARDIEDME 332
Query: 248 KFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLII 307
K + M D G D + + YI + AE+ I + + F++
Sbjct: 333 KVIQAMQAD-GIEPDLLFQATIARHYIFGGYREKAEAILEQMVGDDINENRSAC-KFVLP 390
Query: 308 LYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICI--LSSYLMLGHLKEVGEIIDQ----WK 361
LYA LG D +++IWK + +R C+ + ++ LG +++ EI D WK
Sbjct: 391 LYAFLGKNDDVERIWKVC-----EANARLDECMSAIEAFGKLGDVEKAEEIFDNMFKTWK 445
Query: 362 QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 401
++ + N +L +++ L +K E + C
Sbjct: 446 TLSSKYY-----NAMLKVYANKKLFDKGKELAKRMGDDGC 480
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKT--SETYTALLHLYAGAKWTEKAEELFERVKQSNL 188
I+ K+ + E F+ + + KT S+ Y A+L +YA K +K +EL +R+
Sbjct: 421 IEAFGKLGDVEKAEEIFDNMFKTWKTLSSKYYNAMLKVYANKKLFDKGKELAKRMGDDGC 480
Query: 189 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 234
+ ++ LY G+VEK ++ ++ KN + ++T L +
Sbjct: 481 RLGPYTLDSLVKLYSDAGEVEKADSILHKLSYKNKIKPMYTTYLML 526
>gi|224121664|ref|XP_002330622.1| predicted protein [Populus trichocarpa]
gi|222872226|gb|EEF09357.1| predicted protein [Populus trichocarpa]
Length = 378
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 143/277 (51%), Gaps = 3/277 (1%)
Query: 114 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT 173
M + F + D A R+ L+ +V G+ E YF L + KT TY A+L+ K
Sbjct: 1 MTARRFFTFTTEDAAVRLGLIHRVRGLEEAENYFNKLSVKLKTKYTYGAILNGCVREKSV 60
Query: 174 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 233
+KAE + + +++ ++ ++ YN ++ LY G +K+ +++E++R + D +T
Sbjct: 61 QKAEAVMQEMREGGMTTSSFPYNILIILYSQTGDFDKIPPLMKEMERNGIAEDKYTLRNL 120
Query: 234 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 293
I++ A +I V++ L M + DW Y + Y+ + A + L + EK
Sbjct: 121 IAASVAASDISGVERILKLMEENPELGLDWKLYAMAADAYLKIGSIETA-LTMLEKLEKW 179
Query: 294 IT-QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 352
+ +++ ++FL+ LYA GNKD++ +IW + + + M + +Y C++ S L ++
Sbjct: 180 MAFRKKKAVFNFLLSLYAKTGNKDELYRIWNLYKPSSESMDT-SYCCMIDSLTKLDDIEG 238
Query: 353 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
+I ++W+ T+ +D N LL A+ + GL EKA
Sbjct: 239 AEKIFEEWESQCTTTYDFRVLNGLLVAYCNRGLFEKA 275
>gi|357509403|ref|XP_003624990.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500005|gb|AES81208.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 623
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 169/334 (50%), Gaps = 24/334 (7%)
Query: 76 IQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMT 135
+++WV +G + + E+ + LR+ + Y AL++SEW+ + K + DYA+++DL+
Sbjct: 176 LEKWVEDGKELSREEISLTMINLRRRKIYLKALQLSEWLESKKHLEFVERDYASQLDLIA 235
Query: 136 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 195
K+ G+H E Y E +P S + Y LL +KAEE+F ++K
Sbjct: 236 KLHGLHKAEVYIEKIPESFRGEIIYRTLLANCVTQNNLKKAEEIFNKMKDLEFPLTPFAC 295
Query: 196 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 255
N+++ LY + +K+A V+ ++++NV P T+ + I + +ID + + +D+M
Sbjct: 296 NQLLLLYKRTDK-KKIADVLLLMEQENVKPSPLTFKILIDVKGQSNDIDGMDQIVDQMRA 354
Query: 256 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE-KSITQRQWITYDFLIILYAGLGN 314
+ D++ K V LV YI+ H A+ L E E +++ + +W+ L+ LYA LG
Sbjct: 355 EGIEPDNYTKAV-LVGHYISGGHDDKAK-MLLKEMEGENLKENRWVCR-LLLALYAKLGM 411
Query: 315 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE-------IIDQWKQSATSD 367
D++ ++WK + + + + + + + ++ G LK++ E + +WK ++ +
Sbjct: 412 ADEVGRVWK---VCETRPSVEDCVAAIEAW---GKLKKIDEAEAVFEVMARKWKLTSKN- 464
Query: 368 FDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 401
C+ LL +++ + K + + K C
Sbjct: 465 -----CSVLLNVYANNKMLTKGKDLIKRMAHKGC 493
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
Query: 126 DYATRIDLMTKVFGIHSGERYFEGLPLSAK-TSETYTALLHLYAGAKWTEKAEELFERVK 184
D I+ K+ I E FE + K TS+ + LL++YA K K ++L +R+
Sbjct: 430 DCVAAIEAWGKLKKIDEAEAVFEVMARKWKLTSKNCSVLLNVYANNKMLTKGKDLIKRMA 489
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIF-TYN 231
L +N ++ LY+ G+VEK V+++ +++ V IF +YN
Sbjct: 490 HKGCRIGPLTWNALVKLYVQAGEVEKADSVLQKAIQQSPVRPIFSSYN 537
>gi|297739953|emb|CBI30135.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 166/325 (51%), Gaps = 18/325 (5%)
Query: 39 SSQNEC--LDEETSNSDGKDDLK---SRIFR--ISLPKRSATNVIQRWVSEGNQATVSEL 91
S+QNE LD +T S+ + K S +F+ ++ + +V+ +W EG + +E+
Sbjct: 132 STQNELEPLDTDTDVSEKRSPRKRVSSELFKAIMAASDQPIHSVLNKWDQEGKDMSRAEI 191
Query: 92 RHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLP 151
+ LRK + + AL+ SEWM HK+ + + DYA+R+DL+ KV G+ E Y E +P
Sbjct: 192 AQTMLNLRKIRMFLKALQFSEWMEEHKKLDMVERDYASRVDLIAKVRGLQKAEHYIEKIP 251
Query: 152 LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 211
S + Y LL +KAEE+F ++K N+++ LY V + +K+
Sbjct: 252 KSFRGELVYRTLLANCVSTTNAKKAEEVFNKMKDLGFPITTFACNQLLLLYKRVDK-KKI 310
Query: 212 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
A V+ +++++V P +FTY L I + + +I +++ ++ M + + V+ + LV
Sbjct: 311 ADVLLLMEKEDVKPSLFTYGLLIDTKGQSNDITGMEQIVETMKAEGIEPNLQVQSI-LVR 369
Query: 272 IYITASHLVNAESSTLVEAE-KSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 330
Y+ AE + L E E ++ + +W+ L+ YA LG D +++IWK + +
Sbjct: 370 HYVFGGLKEKAE-AILKEMEGGNLKENRWVCR-VLLPPYAALGKADDVERIWK---VCES 424
Query: 331 KMTSRNYICILSSYLMLGHLKEVGE 355
++ + +Y G LK+V E
Sbjct: 425 NPRLPEFVAAIEAY---GKLKKVEE 446
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 74/155 (47%), Gaps = 4/155 (2%)
Query: 125 SDYATRIDLMTKVFGIHSGERYFEGLPLSAK--TSETYTALLHLYAGAKWTEKAEELFER 182
++ I+ K+ + E F + + K +S+ Y+ALL +YA K K ++L ++
Sbjct: 429 PEFVAAIEAYGKLKKVEEAEAIFNKMSKTFKRLSSKHYSALLKVYADHKMLIKGKDLVKQ 488
Query: 183 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIF-TYNLWISSCAATL 241
+ S L ++ ++ LY+ G+VEK ++++ +++ + +F TY + A
Sbjct: 489 MSDSGCRIGPLTWDALVKLYVEAGEVEKADKILQKAMQQSPIKPMFSTYMAIMDQYAKRG 548
Query: 242 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
+I +K +M SG ++ L+ Y+ A
Sbjct: 549 DIHNSEKMFHQMR-QSGYVSRLRQFQCLIQAYVNA 582
>gi|225441211|ref|XP_002266581.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Vitis vinifera]
Length = 587
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 166/325 (51%), Gaps = 18/325 (5%)
Query: 39 SSQNEC--LDEETSNSDGKDDLK---SRIFR--ISLPKRSATNVIQRWVSEGNQATVSEL 91
S+QNE LD +T S+ + K S +F+ ++ + +V+ +W EG + +E+
Sbjct: 95 STQNELEPLDTDTDVSEKRSPRKRVSSELFKAIMAASDQPIHSVLNKWDQEGKDMSRAEI 154
Query: 92 RHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLP 151
+ LRK + + AL+ SEWM HK+ + + DYA+R+DL+ KV G+ E Y E +P
Sbjct: 155 AQTMLNLRKIRMFLKALQFSEWMEEHKKLDMVERDYASRVDLIAKVRGLQKAEHYIEKIP 214
Query: 152 LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 211
S + Y LL +KAEE+F ++K N+++ LY V + +K+
Sbjct: 215 KSFRGELVYRTLLANCVSTTNAKKAEEVFNKMKDLGFPITTFACNQLLLLYKRVDK-KKI 273
Query: 212 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
A V+ +++++V P +FTY L I + + +I +++ ++ M + + V+ + LV
Sbjct: 274 ADVLLLMEKEDVKPSLFTYGLLIDTKGQSNDITGMEQIVETMKAEGIEPNLQVQSI-LVR 332
Query: 272 IYITASHLVNAESSTLVEAE-KSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 330
Y+ AE + L E E ++ + +W+ L+ YA LG D +++IWK + +
Sbjct: 333 HYVFGGLKEKAE-AILKEMEGGNLKENRWVCR-VLLPPYAALGKADDVERIWK---VCES 387
Query: 331 KMTSRNYICILSSYLMLGHLKEVGE 355
++ + +Y G LK+V E
Sbjct: 388 NPRLPEFVAAIEAY---GKLKKVEE 409
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 74/155 (47%), Gaps = 4/155 (2%)
Query: 125 SDYATRIDLMTKVFGIHSGERYFEGLPLSAK--TSETYTALLHLYAGAKWTEKAEELFER 182
++ I+ K+ + E F + + K +S+ Y+ALL +YA K K ++L ++
Sbjct: 392 PEFVAAIEAYGKLKKVEEAEAIFNKMSKTFKRLSSKHYSALLKVYADHKMLIKGKDLVKQ 451
Query: 183 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIF-TYNLWISSCAATL 241
+ S L ++ ++ LY+ G+VEK ++++ +++ + +F TY + A
Sbjct: 452 MSDSGCRIGPLTWDALVKLYVEAGEVEKADKILQKAMQQSPIKPMFSTYMAIMDQYAKRG 511
Query: 242 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
+I +K +M SG ++ L+ Y+ A
Sbjct: 512 DIHNSEKMFHQMR-QSGYVSRLRQFQCLIQAYVNA 545
>gi|302764000|ref|XP_002965421.1| hypothetical protein SELMODRAFT_406783 [Selaginella moellendorffii]
gi|300166235|gb|EFJ32841.1| hypothetical protein SELMODRAFT_406783 [Selaginella moellendorffii]
Length = 584
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 155/333 (46%), Gaps = 28/333 (8%)
Query: 57 DLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVT 116
+L +RIF S ++V+ +W EG TVS + ++ L+ S R HALE+ EW+
Sbjct: 151 ELLARIFACK-KDESMSSVLDKWKEEGKDLTVSMIVTVINRLKNSNRMAHALEMIEWITA 209
Query: 117 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKA 176
+ GI + E+ FE L KT Y ALL Y +KA
Sbjct: 210 RSK-------------------GIAAAEKLFEELSAEEKTRPVYNALLTRYVFLHNVKKA 250
Query: 177 EELFERVKQSN-LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
E LFE + ++ LS + N MM LY G K ++E+ K V P+IFTYN+ +
Sbjct: 251 EGLFEEMDKAGFLSQSPFALNLMMKLYKHKGDNAKFQEMLEKAKDVAVEPNIFTYNVMLD 310
Query: 236 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 295
A +++ ++K +EM + D Y L Y+ A AE S L+ E
Sbjct: 311 LKAKAGDVEGMEKIFEEMKLNPNAKPDGTSYFTLCKGYLKAGLTDKAEVS-LLRMEVGPF 369
Query: 296 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 355
+R T++++++ Y LG ++++W+ +M + +++ + + G ++ V
Sbjct: 370 RRTKATFEYMMLAYGQLGLISDVERMWQKCKMVPGDGFN-SFLAFQRAMALAGEVQRVDS 428
Query: 356 I---IDQWKQSATSDFDISACNRLLGAFSDVGL 385
+ +D+WK+S T D+ N LL A+ G+
Sbjct: 429 MFKHMDKWKRSKT--VDLKRHNNLLLAYYKKGM 459
>gi|15220095|ref|NP_178143.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42572199|ref|NP_974190.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|145327755|ref|NP_001077853.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75262222|sp|Q9C977.1|PP135_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g80270, mitochondrial; Flags: Precursor
gi|12324975|gb|AAG52431.1|AC018848_2 hypothetical protein; 8785-10851 [Arabidopsis thaliana]
gi|17064898|gb|AAL32603.1| Unknown protein [Arabidopsis thaliana]
gi|20259918|gb|AAM13306.1| unknown protein [Arabidopsis thaliana]
gi|332198258|gb|AEE36379.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332198259|gb|AEE36380.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332198260|gb|AEE36381.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 142/267 (53%), Gaps = 5/267 (1%)
Query: 59 KSRIFR--ISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVT 116
+S +F+ +S P S + + +WV EGN+ T E+ + +LR+ + Y AL++SEW+
Sbjct: 129 QSELFKTIVSAPGLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEA 188
Query: 117 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKA 176
+K+ +++ DYA+R+DL K+ G+ GE + +P S K Y LL A +K+
Sbjct: 189 NKKIEMTERDYASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNVKKS 248
Query: 177 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 236
E +F ++K + ++M+ L+ + + +K+A V+ ++++N+ P + TY + I
Sbjct: 249 ELVFNKMKDLGFPLSGFTCDQMLLLHKRIDR-KKIADVLLLMEKENIKPSLLTYKILIDV 307
Query: 237 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 296
AT +I +++ L+ M D G D+ + L + + + L + L E E +
Sbjct: 308 KGATNDISGMEQILETMK-DEGVELDF-QTQALTARHYSGAGLKDKAEKVLKEMEGESLE 365
Query: 297 RQWITYDFLIILYAGLGNKDKIDQIWK 323
+ L+ +YA LG +D++ +IWK
Sbjct: 366 ANRRAFKDLLSIYASLGREDEVKRIWK 392
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 211
+S TY+ LL +Y K K ++L +R+ +S A ++ ++ LY+ G+VEK
Sbjct: 434 SSSTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEKA 489
>gi|115487560|ref|NP_001066267.1| Os12g0170100 [Oryza sativa Japonica Group]
gi|77553759|gb|ABA96555.1| DNA-binding protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113648774|dbj|BAF29286.1| Os12g0170100 [Oryza sativa Japonica Group]
gi|125578643|gb|EAZ19789.1| hypothetical protein OsJ_35368 [Oryza sativa Japonica Group]
gi|215767656|dbj|BAG99884.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 611
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 164/340 (48%), Gaps = 19/340 (5%)
Query: 68 PKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDY 127
P+ +++W+++GN SEL ++L LR+ + Y AL++ E++ K L + DY
Sbjct: 154 PRVDVAGALKKWLNDGNTLDRSELFYVLLILRRRKLYIKALQLLEYVEESKLIDLGERDY 213
Query: 128 ATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN 187
A+R+DL+ K I+ E+Y E +P S + Y LL +KAE++F ++K
Sbjct: 214 ASRVDLVAKTHSIYKAEKYIENVPASHRGEIVYRTLLANCVAIANVKKAEQVFNKMKDLG 273
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 247
+ N+++ LY V + +K+ V+ ++++NV P +FTY L + + A +I+ ++
Sbjct: 274 FPVSVFSCNQLLLLYKRVDK-KKLGDVLTMMEKENVKPSLFTYKLLVDTKGAARDIEDME 332
Query: 248 KFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLII 307
K + M D G D + + YI + +E+ I + + F++
Sbjct: 333 KVIQAMQAD-GIEPDLLFQATIARHYIFGGYREKSEAILEQMVGDDINENRSAC-KFVLP 390
Query: 308 LYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICI--LSSYLMLGHLKEVGEIIDQ----WK 361
LYA LG D +++IWK + +R C+ + ++ LG +++ EI D WK
Sbjct: 391 LYAFLGKNDDVERIWKVC-----EANARLDECMSAIEAFGKLGDVEKAEEIFDNMFKTWK 445
Query: 362 QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 401
++ + N +L +++ L +K E + C
Sbjct: 446 TLSSKYY-----NAMLKVYANKKLFDKGKELAKRMGDDGC 480
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKT--SETYTALLHLYAGAKWTEKAEELFERVKQSNL 188
I+ K+ + E F+ + + KT S+ Y A+L +YA K +K +EL +R+
Sbjct: 421 IEAFGKLGDVEKAEEIFDNMFKTWKTLSSKYYNAMLKVYANKKLFDKGKELAKRMGDDGC 480
Query: 189 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 234
+ ++ LY G+VEK ++ ++ KN + ++T L +
Sbjct: 481 RLGPYTLDSLVKLYSDAGEVEKADSILHKLSYKNKIKPMYTTYLML 526
>gi|115482780|ref|NP_001064983.1| Os10g0501000 [Oryza sativa Japonica Group]
gi|113639592|dbj|BAF26897.1| Os10g0501000, partial [Oryza sativa Japonica Group]
Length = 451
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 175/367 (47%), Gaps = 32/367 (8%)
Query: 56 DDLKSRIFRISLPKRSATNVIQRW-VSEGNQATVSELRHILKELRKSQRYKHALEISEWM 114
D L R+ + P+ + V+++W ++E E++ I+K L + +R+ AL++S WM
Sbjct: 54 DSLFRRVAAAADPRLPLSPVLEQWCLAEERHVAKPEVQSIIKYLCRRRRFSQALQLSMWM 113
Query: 115 VTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE 174
LS D A R++L+TKV+G+ YF+ +P K + Y +LL YA A E
Sbjct: 114 TERLHLHLSPGDVANRLELITKVYGLDRAVEYFDSMPDQLKQQQCYGSLLKCYAEANCVE 173
Query: 175 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYN--- 231
KAEELFE+++ ++ ++ YN MM LY+ GQVE+V + + ++ +VPD+ T +
Sbjct: 174 KAEELFEKMRGMGMA-SSYAYNVMMRLYLQNGQVERVHSMHQAMEESGIVPDVSTTHTLV 232
Query: 232 -------LWISSCAATLNIDQVKKFLDEM-SCDSGGSDDWVKYVNLVNIYITASHLVNAE 283
+++ +I ++ L++ SC+S Y+ + + + + +V AE
Sbjct: 233 AVLRKKKTLVAAYVVAEDIKAIENVLEKANSCNS-------MYMCRIGVLLKMNDMVGAE 285
Query: 284 SSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK----IDQIWKSLRMTKQKMTSRNYIC 339
+ K + + + L+ Y G DK +DQ K RM +
Sbjct: 286 KAYEEWESKHVYHDSRLI-NLLVDAYCKEGLMDKAEALVDQFIKKGRMPFANTCYK---- 340
Query: 340 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRL--LGAFSDVGLTEKANEFHMLLL 397
+ Y +G + + ++ + SA++++ N L L F++ E A E M LL
Sbjct: 341 LAGGYFKVGQVSKAADLTKKALASASNEWIPDLTNVLMSLNYFAEQKNVEAAEEM-MSLL 399
Query: 398 QKNCAPT 404
Q+ PT
Sbjct: 400 QRLVTPT 406
>gi|148906608|gb|ABR16456.1| unknown [Picea sitchensis]
Length = 600
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 158/337 (46%), Gaps = 10/337 (2%)
Query: 65 ISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSD 124
I LP + +++W+++GN T E+ LR + +K L++S+W+ K F ++
Sbjct: 144 IDLP-----SSLEQWLADGNVLTRREVVITFVHLRNRRMFKRLLKVSDWLEGKKPFKKTE 198
Query: 125 SDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVK 184
DYA+R+D++TK+ GI GE+YF +P + Y LL Y+ EKAEE+F+++K
Sbjct: 199 RDYASRLDVITKILGIFKGEKYFASIPSDMRGQRAYGTLLANYSSTCNVEKAEEIFKKMK 258
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
S A YN+++ LY + + +K+ V++ ++ + V P IFTY + I +I
Sbjct: 259 AEGFSLTAFEYNQLLLLYKRLDK-KKIQDVLKMMEDEGVKPTIFTYKILIDVKGWMGDIG 317
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 304
+++ + M + D + L YI A AE L E E + +
Sbjct: 318 GMEQVAENMKSEDIEMDSGTLEL-LARHYIRAGLAEKAE-VVLKELENVSLKDKRSRLKM 375
Query: 305 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
L+ LYA LG ++++IWK + Y + ++ LG + E EI + ++
Sbjct: 376 LLPLYAELGKPTEVERIWKDFEAFPA-LRLDEYATGVVAWGKLGQI-EKAEITFEKLLNS 433
Query: 365 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 401
N LL ++D L K E + C
Sbjct: 434 GKKLSAKHYNALLNVYADHHLLLKGKELVKRMSDNGC 470
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 66/131 (50%), Gaps = 3/131 (2%)
Query: 126 DYATRIDLMTKVFGIHSGERYFEGLPLSAK--TSETYTALLHLYAGAKWTEKAEELFERV 183
+YAT + K+ I E FE L S K +++ Y ALL++YA K +EL +R+
Sbjct: 406 EYATGVVAWGKLGQIEKAEITFEKLLNSGKKLSAKHYNALLNVYADHHLLLKGKELVKRM 465
Query: 184 KQSNLSFNALMYNEMMTLYMSVGQVEKV-ALVVEEIKRKNVVPDIFTYNLWISSCAATLN 242
+ + +++ ++ L+++ G++EK +++ + +K + P +T + A +
Sbjct: 466 SDNGCTIEPPIWDALIRLHVNAGELEKADSILFKACNQKQLRPKYWTMVTILEKYAERGD 525
Query: 243 IDQVKKFLDEM 253
+ +K D M
Sbjct: 526 VANAEKIFDRM 536
>gi|413950397|gb|AFW83046.1| hypothetical protein ZEAMMB73_939845 [Zea mays]
Length = 453
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 132/302 (43%), Gaps = 37/302 (12%)
Query: 102 QRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYT 161
+RY+ ALEI WM + LS D+A R+DL+ K + E Y+ L A
Sbjct: 122 RRYEQALEIFSWMESCSSLRLSSWDHAARLDLIAKAYSTSQAEEYYNKLQSPATRQAASF 181
Query: 162 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 221
LLH Y + ER EKV V++ +KR
Sbjct: 182 PLLHCY-----------VMER------------------------DHEKVLSVIDLMKRN 206
Query: 222 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 281
N+ ++ +YNLW+++CA +D V+ M D W Y L NI+ + L
Sbjct: 207 NIHRNVLSYNLWMNACAEVSGVDSVQSVFQVMLNDETVKVGWSTYCTLANIF-RKNGLNT 265
Query: 282 AESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICIL 341
+ LV+AE ++ + Y F++ YA L + D + ++W++ + ++ + Y+ +
Sbjct: 266 EAQACLVKAEAKLSPTGRLGYSFVMTCYAALNDSDGVMRMWEASKSVPGRILTAYYMAAM 325
Query: 342 SSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 401
S + +G + + I +W ++ D+ N LLGA+ EKA H+ +L+K
Sbjct: 326 SCSIKVGDISQAECIFGKW-EAGCRKHDVRVSNVLLGAYVRNRWIEKAERLHLHMLEKGA 384
Query: 402 AP 403
P
Sbjct: 385 CP 386
>gi|356547249|ref|XP_003542028.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Glycine max]
Length = 507
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 167/358 (46%), Gaps = 11/358 (3%)
Query: 49 TSNSDGKDDLKSRIFRISLPK-RSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHA 107
T + D L RI R LPK S W+ +G ++ H + LRK K A
Sbjct: 32 TQATQNHDSLSRRIER--LPKGESVGAAFCSWMRDGLPVHGVDVFHAVNRLRKLNMNKRA 89
Query: 108 LEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLY 167
L++ EW++ + + + DY+ ++ TK+ GI GE+ F +P+ + Y L+
Sbjct: 90 LQVMEWVIRERPYRPKELDYSYLVEFTTKLHGISHGEKLFSRIPVEFQNELLYNNLVIAC 149
Query: 168 AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 227
+ + E +++++ + L++N ++ L+ S G+ + + ++ ++K V P +
Sbjct: 150 LDKGVIKLSLEYMKKMRELGFLISHLVFNRLIILHSSPGRRKMIPKLLTQMKADKVTPHV 209
Query: 228 FTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTL 287
TYN+ + A N++ + KF M ++ + Y ++ I + L A + +
Sbjct: 210 STYNILMKIEANEHNLENLVKFFSRMKVAQVAPNE-ISYC-ILAIAHAVARLYTATEAYV 267
Query: 288 VEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 347
EKSIT W T D L++LY LGN+ +++++W ++R + S++Y+ + ++ +
Sbjct: 268 EAVEKSITGNNWSTLDVLLMLYGYLGNQKELERVWATIRELPS-VRSKSYMLAIEAFGRI 326
Query: 348 GHLKEVGEIIDQW--KQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
G L + E+ W +S + N ++ + G KA + + + C P
Sbjct: 327 GQLNQAEEL---WLEMESTKGLKSVEQFNSMMSVYCKHGFIGKAAKLYKNMKASGCKP 381
>gi|224137686|ref|XP_002322619.1| predicted protein [Populus trichocarpa]
gi|222867249|gb|EEF04380.1| predicted protein [Populus trichocarpa]
Length = 472
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 139/267 (52%), Gaps = 7/267 (2%)
Query: 60 SRIFR--ISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTH 117
S +F+ IS P S +V+ +WV+EG E+ + + LRK + + AL++SEW+ +
Sbjct: 6 SELFKAIISAPGVSVHSVLDKWVAEGRDLDQLEISNAMFNLRKRRLFGRALQLSEWVEAN 65
Query: 118 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 177
K + DYA+R+DL+ KV G+ E Y E +P S K Y LL A +KA
Sbjct: 66 KRKDFDERDYASRLDLIAKVRGLQKAEVYIEKIPKSLKGEVIYRTLLANCVSANNAKKAV 125
Query: 178 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 237
E+F ++K L YN+++ LY + +K+A V+ ++++NV P +FTY L I +
Sbjct: 126 EVFNKMKDLELPITLFSYNQLLLLYKRHDK-KKIADVLLSMEKENVKPSLFTYILLIDTK 184
Query: 238 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE-KSITQ 296
+ +I +++ + M + G + +K ++ + + L L E E ++ +
Sbjct: 185 GQSNDIAGMEQIAETMKAE--GIEPDIKTQAIMARHYVSGGLKEKAEIVLKEMEGGNLEE 242
Query: 297 RQWITYDFLIILYAGLGNKDKIDQIWK 323
+W F++ LY LG D++ ++WK
Sbjct: 243 HRWAC-QFMLPLYGTLGKADEVSRLWK 268
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 68/140 (48%), Gaps = 4/140 (2%)
Query: 140 IHSGERYFEGLPLSAK--TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 197
I E FE + + K +S+ Y+ALL +YA K K ++L +++ S L ++
Sbjct: 292 IPEAEAVFELMSKTWKKLSSKHYSALLKVYANNKMLSKGKDLIKQMGDSGCRIGPLTWDA 351
Query: 198 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIF-TYNLWISSCAATLNIDQVKKFLDEMSCD 256
++ LY+ G+VEK ++ + ++N + +F +Y + + A +I +K M
Sbjct: 352 LIKLYVEAGEVEKADSILNKAVQQNQMKPMFSSYMIIMEKYAKKGDIHNAEKMFHRMR-Q 410
Query: 257 SGGSDDWVKYVNLVNIYITA 276
+G ++ L+ YI A
Sbjct: 411 AGYQARSKQFQTLIQAYINA 430
>gi|356557435|ref|XP_003547021.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Glycine max]
Length = 507
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 169/356 (47%), Gaps = 7/356 (1%)
Query: 49 TSNSDGKDDLKSRIFRISLPK-RSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHA 107
T + D L RI + LPK S + + W+ +G ++ H + LRK K A
Sbjct: 32 TQATQNHDSLSRRIEK--LPKGESVGSAFRSWMRDGLPVHGGDIFHAINRLRKLNMNKRA 89
Query: 108 LEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLY 167
L++ EW++ + + + DY+ ++ TK+ GI GE+ F +P+ ++ Y L+
Sbjct: 90 LQVMEWVIRERPYRPRELDYSYLVEFTTKLHGISHGEKLFSRIPVEFQSELLYNNLVIAC 149
Query: 168 AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 227
+ + E +++++ + L++N ++ L+ S G+ + + ++ ++K V P +
Sbjct: 150 LDKGVIKLSLEYMKKMRELGFPISHLVFNRLIILHSSPGRRKMIPKLLTQMKADKVTPHV 209
Query: 228 FTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTL 287
TYN+ + A N++ + K M ++ + Y ++ I + L A + +
Sbjct: 210 STYNILMKIEANEHNLENLVKVFGRMKVAQVEPNE-ISYC-ILAIAHAVARLYTATEAYV 267
Query: 288 VEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 347
EKSIT W T D L++LY LGN+ +++++W +++ + S++Y+ + ++ +
Sbjct: 268 EAVEKSITGNNWSTLDVLLMLYGYLGNQKELERVWATIQELPS-IRSKSYMLAIEAFGRI 326
Query: 348 GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
G L EI + K S + N ++ + G ++A + + + C P
Sbjct: 327 GQLNRAEEIWLEMK-STKGLKSVEQFNSMMSVYCKHGFIDRAAKLYKNMKASGCKP 381
>gi|298571988|gb|ADI87991.1| PPR protein [Silene latifolia]
Length = 224
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 118/225 (52%), Gaps = 2/225 (0%)
Query: 150 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 209
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 270 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
++Y + L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKSGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 374
K+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PKIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|449437710|ref|XP_004136634.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
gi|449506005|ref|XP_004162626.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 606
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 171/363 (47%), Gaps = 38/363 (10%)
Query: 71 SATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATR 130
S ++ + +WVSEGN+ + ++ + LR+ + + AL+ SEW+ + +++DYA+R
Sbjct: 151 SVSSALDKWVSEGNELSWDDISSTMMSLRRRRMFGKALQFSEWLEASGQLEFNENDYASR 210
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSF 190
+DL+ KV G+H E Y +P S + Y LL Y A KAEE+F ++K
Sbjct: 211 LDLIAKVQGLHKAESYIAKIPKSFQGEVMYRTLLANYVAANNVNKAEEVFNKMKDLEFPM 270
Query: 191 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 250
YN+++ LY + K+A V+ ++++NV P FTY + I + + +I +++ +
Sbjct: 271 TTFAYNQVLVLYKRNDR-RKIADVLLLMEKENVKPSPFTYKILIDAKGLSKDISGMEQVV 329
Query: 251 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYA 310
D M + D V + L+ + + L + +TL E E+ ++ L+ LY
Sbjct: 330 DTMKAEGIELD--VFALCLLAKHYVSCGLKDKAKATLKEMEEINSKGSRWPCRLLLPLYG 387
Query: 311 GLGNKDKIDQIWKSLRM----------------------------------TKQKMTSRN 336
L +D++ ++W+ K+K+++++
Sbjct: 388 ELEMEDEVRRLWEICEANPHIEECMAAIVAWGKLKNIHEAEKIFDKVVKTWPKKKISTKH 447
Query: 337 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 396
Y ++ Y L + E+++Q +S S D A + ++ + + G EKA+ F +
Sbjct: 448 YCTMIKVYGDCKMLTKGKELVNQMAESGYS-IDPLAWDAVVKLYVEAGEVEKADTFLVKA 506
Query: 397 LQK 399
++K
Sbjct: 507 VKK 509
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Query: 136 KVFGIHSGERYFEGL----PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFN 191
K+ IH E+ F+ + P +++ Y ++ +Y K K +EL ++ +S S +
Sbjct: 420 KLKNIHEAEKIFDKVVKTWPKKKISTKHYCTMIKVYGDCKMLTKGKELVNQMAESGYSID 479
Query: 192 ALMYNEMMTLYMSVGQVEKV-ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 250
L ++ ++ LY+ G+VEK +V+ +K+ + P +Y ++ A ++ +K
Sbjct: 480 PLAWDAVVKLYVEAGEVEKADTFLVKAVKKYEMRPLYCSYRTLMNHYARRGDVHNAEKIF 539
Query: 251 DEMSCDSGGSDDWV-KYVNLVNIYITA 276
+M G W ++ L+ Y+ +
Sbjct: 540 YKMR--QSGYGPWFNQFETLIQAYVNS 564
>gi|449506017|ref|XP_004162629.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 608
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 161/335 (48%), Gaps = 15/335 (4%)
Query: 71 SATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATR 130
S + + +WVSEG + +E+ + LRK + + AL+ SEW+ + + + DYA+R
Sbjct: 155 SVPSALDKWVSEGKDLSRAEISLAMLHLRKRRMFGKALQFSEWLEANGQLEFNQRDYASR 214
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSF 190
+DL+ KV G+ E Y +P S + + LL Y A +KAEE+F ++K
Sbjct: 215 LDLIAKVQGLPKAESYIAKIPQSFQGEVIHRTLLANYVAANNVKKAEEVFNKMKDLEFPM 274
Query: 191 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 250
+++M+ LY + + K+A ++ ++++NV P FTY + I + +I +++ +
Sbjct: 275 TPFAHDQMLILYKRIDK-RKLADILSLMEKENVKPSPFTYKILIDAKGLCNDISGMEQVV 333
Query: 251 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYA 310
D M + D V ++L+ + ++ L + L + E++ ++ + L+ LY
Sbjct: 334 DSMKAEGIKPD--VSTLSLLAKHYVSNGLKDKAKVILKDMEENNSKGSRLPCRILLPLYG 391
Query: 311 GLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ----WKQSATS 366
L +D++ ++WK S + + ++ L +++E +I D+ WK+ +T
Sbjct: 392 ALQMEDEVRRLWKICEANPHMEES---MAAIVAWGKLKNVQEAEKIFDRFVKTWKKPSTR 448
Query: 367 DFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 401
+ N ++ + + K E + + C
Sbjct: 449 HY-----NTMMNVYGGSKMLTKGKELVNQMAESGC 478
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 70/144 (48%), Gaps = 4/144 (2%)
Query: 136 KVFGIHSGERYFEGLPLSAKTSET--YTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 193
K+ + E+ F+ + K T Y ++++Y G+K K +EL ++ +S + L
Sbjct: 424 KLKNVQEAEKIFDRFVKTWKKPSTRHYNTMMNVYGGSKMLTKGKELVNQMAESGCRMDEL 483
Query: 194 MYNEMMTLYMSVGQVEKV-ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 252
++ ++ LY+ G+VEK + +V+ +++ + P +Y + A ++ +K D+
Sbjct: 484 TWDAVVKLYVEAGEVEKADSFLVKAVQKYGMKPLFTSYKTLMDHYARRGDVHNAEKIFDK 543
Query: 253 MSCDSGGSDDWVKYVNLVNIYITA 276
M SG ++ L+ Y+ +
Sbjct: 544 M-IQSGFVPRLGQFGTLLQAYVNS 566
>gi|307136025|gb|ADN33879.1| DNA-binding protein [Cucumis melo subsp. melo]
Length = 608
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 171/344 (49%), Gaps = 27/344 (7%)
Query: 68 PKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDY 127
P S T+ + +WVSEG++ + ++ + LRK + + AL+ SEW+ + +++DY
Sbjct: 152 PALSVTSALDKWVSEGHELSRDDISSTMFGLRKRRMFGKALQFSEWLEASGQLEFNEADY 211
Query: 128 ATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN 187
A+ +DL+ KV G+H E Y +P S + Y LL Y A +KAEE+F R+K
Sbjct: 212 ASHLDLIAKVQGLHKAETYIAKIPNSFRGEAVYRTLLANYVLANDVKKAEEVFNRMKDLE 271
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 247
Y++M+ LY + + ++A ++ ++++NV P FTY + I + + +I ++
Sbjct: 272 FPMTTFAYDQMLILYKRIDR-RRIADILSLMEKENVKPRPFTYKILIDAKGLSNDISGME 330
Query: 248 KFLDEMSCDSGGSDDWVKYVNLVNIYITASHLV----NAESSTLVEAEKSITQR--QWIT 301
+ +D M + +K +++ + + A H V ++ +++A + + + +W
Sbjct: 331 QVVDTMKAEG------IK-LDVDTLLLLAKHYVLGGLKDKAMPILKATEEVNSKGSRWPC 383
Query: 302 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ-- 359
+L+ LY L +D++ ++W+ + + + + ++ L +++E +I D+
Sbjct: 384 R-YLLPLYGELQMEDEVRRLWE---ICEPNPNVEECMAAIVAWGKLKNIQEAEKIFDRVV 439
Query: 360 --WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 401
WK+ +T + + ++ + D + K E + + C
Sbjct: 440 KTWKRLSTKHY-----STMIKVYGDSKMLTKGKELVNQMAKSGC 478
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 73/144 (50%), Gaps = 4/144 (2%)
Query: 136 KVFGIHSGERYFEGLPLSAK--TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 193
K+ I E+ F+ + + K +++ Y+ ++ +Y +K K +EL ++ +S + +
Sbjct: 424 KLKNIQEAEKIFDRVVKTWKRLSTKHYSTMIKVYGDSKMLTKGKELVNQMAKSGCRIDPM 483
Query: 194 MYNEMMTLYMSVGQVEKV-ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 252
+++ ++ LY+ G+VEK + + + +K+ + P +Y + A ++ +K +
Sbjct: 484 IWDAVVKLYVEAGEVEKADSFLFKAVKQYGMKPLFDSYRTLMVHYARKGDVHNSEKIFHK 543
Query: 253 MSCDSGGSDDWVKYVNLVNIYITA 276
+ SG + ++V LV Y+ A
Sbjct: 544 IR-QSGYPTHFGQFVTLVQAYLNA 566
>gi|298572008|gb|ADI88001.1| PPR protein [Silene latifolia]
gi|298572012|gb|ADI88003.1| PPR protein [Silene latifolia]
gi|298572028|gb|ADI88011.1| PPR protein [Silene latifolia]
gi|298572052|gb|ADI88023.1| PPR protein [Silene latifolia]
Length = 224
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 117/225 (52%), Gaps = 2/225 (0%)
Query: 150 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 209
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 270 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 374
K+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PKIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572016|gb|ADI88005.1| PPR protein [Silene latifolia]
Length = 224
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 117/225 (52%), Gaps = 2/225 (0%)
Query: 150 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 209
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYGGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 270 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
++Y + L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKSGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 374
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572060|gb|ADI88027.1| PPR protein [Silene latifolia]
Length = 224
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 117/225 (52%), Gaps = 2/225 (0%)
Query: 150 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 209
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 270 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGKLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 374
K+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PKIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298571984|gb|ADI87989.1| PPR protein [Silene latifolia]
Length = 224
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 117/225 (52%), Gaps = 2/225 (0%)
Query: 150 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 209
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEDLVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 270 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 374
K+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PKIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572004|gb|ADI87999.1| PPR protein [Silene latifolia]
gi|298572006|gb|ADI88000.1| PPR protein [Silene latifolia]
Length = 224
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 117/225 (52%), Gaps = 2/225 (0%)
Query: 150 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 209
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 270 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 374
K+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PKIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|449438490|ref|XP_004137021.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 334
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 125/227 (55%), Gaps = 8/227 (3%)
Query: 180 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 239
+++++ L YN M+ LY +G+ EK+A +++E++ + PD FTYN+ +++ AA
Sbjct: 1 MQKMREVGFMKTPLSYNAMLNLYAHLGKHEKLAELLKEMEEMGIGPDRFTYNIRMNAYAA 60
Query: 240 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV--EAEKSITQR 297
+I ++K L +M D + DW Y + N Y A +E+S L+ +AE+ I +
Sbjct: 61 ASDITNMEKLLSKMEADPLVATDWHTYFVVGNGYFKAGL---SENSILMLKKAEQFIGDK 117
Query: 298 Q-WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 356
Q W+ Y +L+ LYA +GNKD++ ++W +L QK + Y+CI+SS + L + I
Sbjct: 118 QKWLAYQYLMTLYAAIGNKDEVYRVW-NLYTNLQKRFNSGYLCIISSLMKLDDIDGAERI 176
Query: 357 IDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
+ +W+ TS FD N ++ ++ G +KA + L++ P
Sbjct: 177 LKEWESGDTS-FDFRIPNMMINSYCTKGFVDKAEAYINRLIETGKEP 222
>gi|298571976|gb|ADI87985.1| PPR protein [Silene latifolia]
gi|298571992|gb|ADI87993.1| PPR protein [Silene latifolia]
gi|298572000|gb|ADI87997.1| PPR protein [Silene latifolia]
gi|298572064|gb|ADI88029.1| PPR protein [Silene latifolia]
Length = 224
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 117/225 (52%), Gaps = 2/225 (0%)
Query: 150 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 209
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 270 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
++Y + L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKSGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 374
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|297844450|ref|XP_002890106.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297335948|gb|EFH66365.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 594
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 137/266 (51%), Gaps = 5/266 (1%)
Query: 60 SRIFR--ISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTH 117
S +F+ +S+ S + + +WV +G + +E + +LRK + Y AL+++EW+ +
Sbjct: 128 SELFKAIVSVSGLSVGSALDKWVEQGKDTSRTEFASAMLQLRKRRMYGRALQMTEWLDDN 187
Query: 118 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 177
K+F + + DYA+R+DL++KV G++ GE Y E +P S + Y LL Y AE
Sbjct: 188 KQFEMKERDYASRLDLISKVRGLYKGEAYIETIPESFRGELVYRTLLSNYVATSNVRTAE 247
Query: 178 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 237
+F ++K + N+M+ LY V + +K+A V+ ++++N+ P++ TY + I +
Sbjct: 248 AVFNKMKDLGFPLSTFTCNQMLILYKRVDK-KKIADVLLLMEKENLKPNLNTYKILIDTK 306
Query: 238 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 297
+ +I +++ ++ M + G D + Y +A AE L E E +
Sbjct: 307 GLSNDITGMEQIVETMKSE-GVEPDLRARALIARNYASAGLKEKAE-KVLKEMEGESLEE 364
Query: 298 QWITYDFLIILYAGLGNKDKIDQIWK 323
Y L+ +Y L D++ +IWK
Sbjct: 365 NRHVYKDLLSVYGFLQRADEVTRIWK 390
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 120/267 (44%), Gaps = 18/267 (6%)
Query: 21 RPN-SDYECFFYSRFLSSGSSQNECLDEETSNSDGKDDLKSRI-----FRISLPKRSATN 74
+PN + Y+ ++ LS+ + E + E + + DL++R + + K A
Sbjct: 293 KPNLNTYKILIDTKGLSNDITGMEQIVETMKSEGVEPDLRARALIARNYASAGLKEKAEK 352
Query: 75 VIQRWVSEGNQATVSELRHILKELRKSQRY-KHALEISE-WMVTHKEFVLSDSDYATRID 132
V++ E ++ E RH+ K+L + + A E++ W + ++ ++S A I
Sbjct: 353 VLKEMEGE----SLEENRHVYKDLLSVYGFLQRADEVTRIWKICEEKPRYNESLAA--IL 406
Query: 133 LMTKVFGIHSGERYFEG-LPLSAK-TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSF 190
K+ + E FE L +S + +S Y+ LL +Y K + ++L +++ S +
Sbjct: 407 AFGKIDKVKEAEAVFEKMLKMSHRVSSNVYSVLLRVYVDHKMVSEGKDLVKQMLDSGCNI 466
Query: 191 NALMYNEMMTLYMSVGQVEKV-ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 249
AL + ++ LY+ G+VEK + + + I+ K + P + ++ + ++ +K
Sbjct: 467 GALTLDAVIKLYLEAGEVEKAESSLSKAIQSKQIKPLMSSFMYVMGEYVRRGDVHNTEKI 526
Query: 250 LDEMSCDSGGSDDWVKYVNLVNIYITA 276
M G + Y L+ Y+ A
Sbjct: 527 FQRMK-QFGYQSRFRTYQALIQAYVNA 552
>gi|298572018|gb|ADI88006.1| PPR protein [Silene latifolia]
Length = 224
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 117/225 (52%), Gaps = 2/225 (0%)
Query: 150 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 209
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSHGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 270 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
++Y + L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKSGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 374
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572036|gb|ADI88015.1| PPR protein [Silene latifolia]
Length = 224
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 117/225 (52%), Gaps = 2/225 (0%)
Query: 150 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 209
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 270 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
++Y + L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKSGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 374
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|226533322|ref|NP_001142217.1| uncharacterized protein LOC100274385 [Zea mays]
gi|194707648|gb|ACF87908.1| unknown [Zea mays]
gi|414870857|tpg|DAA49414.1| TPA: hypothetical protein ZEAMMB73_857299 [Zea mays]
Length = 472
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 141/282 (50%), Gaps = 5/282 (1%)
Query: 109 EISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYA 168
++S WM + LS D A R+DL++KV G+ YF +P + + Y +LL Y
Sbjct: 48 QLSFWMTDRRHLHLSVGDVAYRLDLISKVHGLEKAVEYFGMVPKQLRKPQCYGSLLKCYV 107
Query: 169 GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIF 228
AK +KAEE F ++++ ++ ++ Y MM LY+ GQ+E+V + ++++ K V PD F
Sbjct: 108 EAKAVDKAEEHFAKMQEMGMT-SSYAYTWMMKLYLQTGQLERVHAMFQDMEEKGVKPDTF 166
Query: 229 TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV 288
+ +++ A ++ V K LD+ + W + + ++++ + V A + LV
Sbjct: 167 SVEAMLAAYIAAEDVQGVGKVLDKANPHEKLV-TWHGHASAASLFMKSGMQVGAVMA-LV 224
Query: 289 EAEKSITQR-QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 347
EAE+ I+ + I Y FL+ Y LG + +IW S+ +K + Y+ LS+ L
Sbjct: 225 EAERRISPKSSRIAYAFLLKTYTELGMHAEAGRIW-SVYKSKVPPCNTMYMSRLSALLRT 283
Query: 348 GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
+ + +W+ D N ++ A+ GL EKA
Sbjct: 284 NDIDGAEATLKEWETVPLRYHDFRLINVMVDAYCREGLVEKA 325
>gi|125532538|gb|EAY79103.1| hypothetical protein OsI_34209 [Oryza sativa Indica Group]
Length = 479
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 173/367 (47%), Gaps = 32/367 (8%)
Query: 56 DDLKSRIFRISLPKRSATNVIQRW-VSEGNQATVSELRHILKELRKSQRYKHALEISEWM 114
D L R+ + P+ + V+++W ++E E++ I+K L + +R+ AL++S WM
Sbjct: 82 DSLFRRVAAAADPRLPLSPVLEQWCLAEERPIAKPEIQSIIKYLCRRRRFSQALQLSMWM 141
Query: 115 VTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE 174
LS D A R++L+TKV G+ YF+ +P K + Y +LL YA A E
Sbjct: 142 TERLHLHLSPGDVANRLELITKVHGLDRAVEYFDSMPDQLKQQQCYGSLLKCYAEANCVE 201
Query: 175 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYN--- 231
KAEELFE+++ ++ ++ YN MM LY+ GQVE+V + + ++ +VPD+ T +
Sbjct: 202 KAEELFEKMRGMGMA-SSYAYNVMMRLYLQNGQVERVHSMHQAMEESGIVPDVSTTHTLV 260
Query: 232 -------LWISSCAATLNIDQVKKFLDEM-SCDSGGSDDWVKYVNLVNIYITASHLVNAE 283
+++ +I ++ L++ SC+S Y+ + + + + +V AE
Sbjct: 261 AVLRKKKTLVAAYVVAEDIKAIENVLEKANSCNS-------MYMCRIGVLLKMNDMVGAE 313
Query: 284 SSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK----IDQIWKSLRMTKQKMTSRNYIC 339
+ K + + + L+ Y G DK +DQ K RM +
Sbjct: 314 KAYEEWESKHVYHDSRLI-NLLVDAYCKEGLMDKAEALVDQFIKKGRMPFANTCYK---- 368
Query: 340 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRL--LGAFSDVGLTEKANEFHMLLL 397
+ Y +G + + ++ + SA++++ N L L F++ E A E LL
Sbjct: 369 LAGGYFKVGQVSKAADLTKKALASASNEWIPDLTNVLMSLNYFAEQKNVEAAEEMAS-LL 427
Query: 398 QKNCAPT 404
Q+ PT
Sbjct: 428 QRLITPT 434
>gi|125575301|gb|EAZ16585.1| hypothetical protein OsJ_32057 [Oryza sativa Japonica Group]
Length = 400
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 176/377 (46%), Gaps = 39/377 (10%)
Query: 45 LDEETSNSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRY 104
+++E ++S DLKS S+ N ++E E++ I+K L + +R+
Sbjct: 1 MEQELTSSGPYKDLKSM--------GSSNNSFNGALAEERHVAKPEVQSIIKYLCRRRRF 52
Query: 105 KHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALL 164
AL++S WM LS D A R++L+TKV+G+ YF+ +P K + Y +LL
Sbjct: 53 SQALQLSMWMTERLHLHLSPGDVANRLELITKVYGLDRAVEYFDSMPDQLKQQQCYGSLL 112
Query: 165 HLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVV 224
YA A EKAEELFE+++ ++ ++ YN MM LY+ GQVE+V + + ++ +V
Sbjct: 113 KCYAEANCVEKAEELFEKMRGMGMA-SSYAYNVMMRLYLQNGQVERVHSMHQAMEESGIV 171
Query: 225 PDIFTYN----------LWISSCAATLNIDQVKKFLDEM-SCDSGGSDDWVKYVNLVNIY 273
PD+ T + +++ +I ++ L++ SC+S Y+ + +
Sbjct: 172 PDVSTTHTLVAVLRKKKTLVAAYVVAEDIKAIENVLEKANSCNS-------MYMCRIGVL 224
Query: 274 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK----IDQIWKSLRMTK 329
+ + +V AE + K + + + L+ Y G DK +DQ K RM
Sbjct: 225 LKMNDMVGAEKAYEEWESKHVYHDSRLI-NLLVDAYCKEGLMDKAEALVDQFIKKGRMPF 283
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRL--LGAFSDVGLTE 387
+ + Y +G + + ++ + SA++++ N L L F++ E
Sbjct: 284 ANTCYK----LAGGYFKVGQVSKAADLTKKALASASNEWIPDLTNVLMSLNYFAEQKNVE 339
Query: 388 KANEFHMLLLQKNCAPT 404
A E M LLQ+ PT
Sbjct: 340 AAEEM-MSLLQRLVTPT 355
>gi|297835552|ref|XP_002885658.1| hypothetical protein ARALYDRAFT_899047 [Arabidopsis lyrata subsp.
lyrata]
gi|297331498|gb|EFH61917.1| hypothetical protein ARALYDRAFT_899047 [Arabidopsis lyrata subsp.
lyrata]
Length = 737
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 160/341 (46%), Gaps = 14/341 (4%)
Query: 58 LKSRIFRISLPKRSATNVIQRW---VSEGNQATVSELRHILKELRKSQRYKHALEISEWM 114
L+SRI K T V+++W +G Q S +R +++ LR SQR + ALE+S WM
Sbjct: 24 LQSRIEAALEKKAEITTVLEQWRQQQEQGKQLNPSLVRGVVENLRDSQRCREALEVSNWM 83
Query: 115 VTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE 174
+ K L D+ TR L+ VFG+ + E +P + + Y +LL Y +
Sbjct: 84 IVQKICNLIPEDFTTRFHLIENVFGLEEAGNFVESIPENLRNESIYNSLLSSYVRRNDLD 143
Query: 175 KAEELFERVKQSNLSFNALMYNEMMTLYMSV--GQVEKVALVVEEIKRKNVVPDIFTYNL 232
KAE F+++++ L A YN M +LY + G KV ++ E+K N+ D T N
Sbjct: 144 KAESTFKKMRELGLLLRASPYNSMTSLYRRIPHGNRCKVDEILREMKESNIKLDRDTVNN 203
Query: 233 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 292
+ A +I ++KFL E ++ DW+ +++ Y+ + A+ +
Sbjct: 204 ALRVYADVTHIATMEKFLAEWEGNT--PLDWLTRLDMAKAYLRSGFKGKAKEML----RR 257
Query: 293 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 352
+ R +Y+ L+ LY G + + ++W + +K + + ++ S L L +
Sbjct: 258 TEELRDPKSYEELMRLYGEAGGRKDVYRVWDLYKKLSKK-DNEGFRALIGSLLKLDDING 316
Query: 353 VGEI-IDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
E +W+ S FD+ L+ ++ + G+ EKA++
Sbjct: 317 AEEFYYKEWECSGLP-FDVRIPTMLVSSYREKGMVEKADKL 356
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 141/317 (44%), Gaps = 22/317 (6%)
Query: 56 DDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMV 115
D L I + + T +++ +GN SELR ++K L S ++ ALE S+WM
Sbjct: 354 DKLIKEIMKNEESVKPITPLLESLERKGNVVKPSELRDLIKNLCDSNQFYKALEASKWMS 413
Query: 116 THKEFVLSDSDYATRIDLMTKVFGIHSGERYFE-GLPLSAKTSETYTALLHLYAGAKWT- 173
T F L DYA R+ ++ V G E++FE +P + K Y LL YA + T
Sbjct: 414 TKTSFNLFPQDYAARLHMIENVLGFEEAEKFFERSIPENMKDDYVYGTLLSCYAKSHKTL 473
Query: 174 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 233
+KAE +FE++ +N M++LY +G+ EKV ++ ++K N+ PD T N
Sbjct: 474 DKAEAIFEKMGDLGFLSKPSPFNSMISLYSQLGKREKVENLISKMKCMNIEPDSLTMNNV 533
Query: 234 ISSCAATLNIDQVKKFLDE-MSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 292
+ A +I + K+ E ++ + + V + N Y A L+ A T K
Sbjct: 534 LRMYADETDIKTMDKYKREWINAEKNTKLEMRTMVAMANAYERAGLLLKAIEIT---RSK 590
Query: 293 SITQRQWITYDFLIILYAGLGNKDKIDQIWK----SLRMTKQKMTSRNYICILSSYLMLG 348
+ R W Y K+K + +K +L + + Y ++SS L L
Sbjct: 591 NEVHRLWNEY------------KEKEKRNYKIDDANLCKCRSAVGDEEYQSVISSLLKLD 638
Query: 349 HLKEVGEIIDQWKQSAT 365
LK EI +W+
Sbjct: 639 DLKGAEEIYGEWEPEGP 655
>gi|298571978|gb|ADI87986.1| PPR protein [Silene latifolia]
gi|298571980|gb|ADI87987.1| PPR protein [Silene latifolia]
gi|298571982|gb|ADI87988.1| PPR protein [Silene latifolia]
gi|298571990|gb|ADI87992.1| PPR protein [Silene latifolia]
gi|298571994|gb|ADI87994.1| PPR protein [Silene latifolia]
gi|298571996|gb|ADI87995.1| PPR protein [Silene latifolia]
gi|298571998|gb|ADI87996.1| PPR protein [Silene latifolia]
gi|298572002|gb|ADI87998.1| PPR protein [Silene latifolia]
gi|298572020|gb|ADI88007.1| PPR protein [Silene latifolia]
gi|298572022|gb|ADI88008.1| PPR protein [Silene latifolia]
Length = 224
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 116/225 (51%), Gaps = 2/225 (0%)
Query: 150 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 209
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 270 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 374
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572062|gb|ADI88028.1| PPR protein [Silene latifolia]
Length = 224
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 116/225 (51%), Gaps = 2/225 (0%)
Query: 150 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 209
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSHGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 270 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 374
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572066|gb|ADI88030.1| PPR protein [Silene latifolia]
Length = 224
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 116/225 (51%), Gaps = 2/225 (0%)
Query: 150 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 209
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 270 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGQLDKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 374
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572024|gb|ADI88009.1| PPR protein [Silene latifolia]
gi|298572032|gb|ADI88013.1| PPR protein [Silene latifolia]
gi|298572044|gb|ADI88019.1| PPR protein [Silene latifolia]
gi|298572056|gb|ADI88025.1| PPR protein [Silene latifolia]
Length = 224
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 116/225 (51%), Gaps = 2/225 (0%)
Query: 150 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 209
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 270 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 374
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572014|gb|ADI88004.1| PPR protein [Silene latifolia]
gi|298572038|gb|ADI88016.1| PPR protein [Silene latifolia]
Length = 224
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 116/225 (51%), Gaps = 2/225 (0%)
Query: 150 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 209
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 270 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 374
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572040|gb|ADI88017.1| PPR protein [Silene latifolia]
Length = 224
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 116/225 (51%), Gaps = 2/225 (0%)
Query: 150 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 209
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 270 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 374
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 TNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|357119107|ref|XP_003561287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Brachypodium distachyon]
Length = 576
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 175/376 (46%), Gaps = 21/376 (5%)
Query: 29 FFYSRFLSSGSSQNECLDEET--SNSDGKDDLKSRIFRISLP----------KRSATNVI 76
F Y+ LS+G+ E ++ N D DLKS+ RI P S +V+
Sbjct: 70 FGYNDELSNGNGTIEANISKSWSFNMDHSADLKSK-HRIHRPYLFQTVLDAHSLSVKSVL 128
Query: 77 QRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTK 136
+W+ +GNQ +E+ +L L+K + Y A + EW+ + DYA +DL+ +
Sbjct: 129 DKWIEDGNQLERNEVLLVLFHLKKQRLYWKAFQFMEWIERGHLLNFEERDYACHLDLIAR 188
Query: 137 VFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYN 196
GI +Y + +P + Y LL A+ +KAEE+F ++ +L N
Sbjct: 189 NTGIEDARKYIDRVPKPFRNEVLYETLLVNCVRARDIQKAEEVFREIRDLSLPLTVSACN 248
Query: 197 EMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCD 256
+M+ LY V + KVA ++ ++++N+ P FTY L I + +I V+ L+EM
Sbjct: 249 QMILLYKRVART-KVADIIMLMEKENIKPSPFTYKLIIDLKGRSNDISGVEVTLNEMKA- 306
Query: 257 SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKD 316
+G D+V + YI+ L+ + + E E + + L+ LYA L D
Sbjct: 307 AGVEPDFVTQTMVAKFYISGG-LIEKAKAVVSEIEMEYMKDKRHAVRSLLHLYAALSKPD 365
Query: 317 KIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRL 376
++ +IWK T+ K+ +++ + ++ LG +++ E + + AT N +
Sbjct: 366 EVARIWKLC--TEPKLD--DFMAAIEAWGKLGCIEQAEETFEAMLE-ATQKLSSKYYNGM 420
Query: 377 LGAFSDVGLTEKANEF 392
L +++ L +K +F
Sbjct: 421 LNVYAENKLMDKGKKF 436
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Query: 230 YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVE 289
YN ++ A +D+ KKF++ MS D G + + + LV +Y+ + + A+S
Sbjct: 417 YNGMLNVYAENKLMDKGKKFVERMSFD-GCPNGPLTWDALVKLYVNSGEVAKADSFLQNA 475
Query: 290 AEKSITQRQ-WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYL 345
E++ +R + +Y +L++ YA +G+ ++++ L+ + Y +L +Y+
Sbjct: 476 TEQNPDRRPTYGSYIYLLMAYAKMGDIYNAEKMFDRLKNIRYPGRKPPYPVLLEAYV 532
>gi|298572042|gb|ADI88018.1| PPR protein [Silene latifolia]
Length = 224
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 116/225 (51%), Gaps = 2/225 (0%)
Query: 150 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 209
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 270 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGELEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 374
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 TNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572026|gb|ADI88010.1| PPR protein [Silene latifolia]
gi|298572046|gb|ADI88020.1| PPR protein [Silene latifolia]
Length = 224
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 116/225 (51%), Gaps = 2/225 (0%)
Query: 150 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 209
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 270 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGELEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 374
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572010|gb|ADI88002.1| PPR protein [Silene latifolia]
gi|298572034|gb|ADI88014.1| PPR protein [Silene latifolia]
gi|298572054|gb|ADI88024.1| PPR protein [Silene latifolia]
Length = 224
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 116/225 (51%), Gaps = 2/225 (0%)
Query: 150 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 209
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 270 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 374
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298571986|gb|ADI87990.1| PPR protein [Silene latifolia]
Length = 224
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 116/225 (51%), Gaps = 2/225 (0%)
Query: 150 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 209
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 270 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 374
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572030|gb|ADI88012.1| PPR protein [Silene latifolia]
Length = 224
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 117/225 (52%), Gaps = 2/225 (0%)
Query: 150 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 209
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
+V +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 EVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 270 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGELEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 374
K+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PKIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|15222438|ref|NP_172238.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75163930|sp|Q940Q2.1|PPR19_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g07590, mitochondrial; Flags: Precursor
gi|15809864|gb|AAL06860.1| At1g07590/F22G5_2 [Arabidopsis thaliana]
gi|332190025|gb|AEE28146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 534
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 177/393 (45%), Gaps = 10/393 (2%)
Query: 1 MAARSFFL-GLRRAS--NTKIKNRPNSDYECFFYSRFLSSGSSQNECLDEETSNSDGKDD 57
M R +F+ +RR + + N+ N F + S S + C+ E +
Sbjct: 8 MRQREYFVQAIRRTTCVASPALNQTNFQASSFLTTLISSKKSPEETCIGSEEEEEEPNKC 67
Query: 58 LKSRIFRISLPKR-SATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVT 116
L RI + LPK + + +Q W+ +G ++ H + LRK R K ALE+ EW++
Sbjct: 68 LSLRIEK--LPKGVTVGSALQSWMGDGFPVHGGDVYHAINRLRKLGRNKRALELMEWIIR 125
Query: 117 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKA 176
+ + L + +Y+ ++ K+ G+ GE+ F +P + Y L+ A
Sbjct: 126 ERPYRLGELEYSYLLEFTVKLHGVSQGEKLFTRVPQEFQNELLYNNLVIACLDQGVIRLA 185
Query: 177 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 236
E +++++ + L+YN ++ + G+ + +A + +K P + TY++ +
Sbjct: 186 LEYMKKMRELGYRTSHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKL 245
Query: 237 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 296
A NID V K D M +G + V Y L + A AE+ T E EKSIT
Sbjct: 246 EANEHNIDGVLKAFDGMK-KAGVEPNEVSYCILAMAHAVARLYTVAEAYT-EEIEKSITG 303
Query: 297 RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 356
W T D L+ILY LG + ++ + W +R + S++Y+ ++ +G+L E+
Sbjct: 304 DNWSTLDILMILYGRLGKEKELARTWNVIRGF-HHVRSKSYLLATEAFARVGNLDRAEEL 362
Query: 357 IDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
+ K + + N LL + GL EKA
Sbjct: 363 WLEMK-NVKGLKETEQFNSLLSVYCKDGLIEKA 394
>gi|298572058|gb|ADI88026.1| PPR protein [Silene latifolia]
Length = 224
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 116/225 (51%), Gaps = 2/225 (0%)
Query: 150 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 209
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 270 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 374
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|224106481|ref|XP_002314181.1| predicted protein [Populus trichocarpa]
gi|222850589|gb|EEE88136.1| predicted protein [Populus trichocarpa]
Length = 525
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 175/372 (47%), Gaps = 22/372 (5%)
Query: 24 SDYECFFYSRFLSSGSSQNECLDEETSNSDGKDDLKSRIFRISLPK-RSATNVIQRWVSE 82
+ Y CF FL++ + +++ + +G L SRI + LP+ S Q W+ E
Sbjct: 30 TPYTCF---NFLNTHTIDK--FPKKSLDPEGPKCLSSRIEK--LPRGESVGYAFQSWMGE 82
Query: 83 GNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHS 142
G ++ H + LRK + K ALE+ EW+V + + L + DY+ ++ TK GI
Sbjct: 83 GFPIHRGDVFHTINRLRKLRLNKRALEVMEWVVRERPYRLKELDYSYLLEFTTKHHGISH 142
Query: 143 GERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY 202
GE+ F +P + Y L+ + + +++++ + L++N ++ L+
Sbjct: 143 GEKLFLHVPSEFQNELLYNNLVISCLEKGVIRLSLDYMKKMREQGHPISYLIFNRLIILH 202
Query: 203 MSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 262
S G + + ++ +++ VVP + TYN+ + A NID + K ++M ++
Sbjct: 203 SSPGSRKMIPKILAQMRADKVVPHVSTYNILMKIEANEHNIDGLVKVFNDMKRFKVEPNE 262
Query: 263 WVKYVNLVNIYITASHLVNAESSTLVEA-EKSITQRQWITYDFLIILYAGLGNKDKIDQI 321
V + L + A AE+ VEA EKS + W T D LIILY LG + ++++
Sbjct: 263 -VSFCILATAHAAARLYTVAEA--YVEAVEKSCSGDNWSTLDVLIILYGHLGKEKELERT 319
Query: 322 WKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ----SATSDFDISACNRLL 377
W + + + S++Y+ + +Y +G L E+ + K +T F N +L
Sbjct: 320 W-GIVLELPHVRSKSYMLAIEAYGKIGQLSRAEELWLEMKSIHGLRSTEQF-----NSML 373
Query: 378 GAFSDVGLTEKA 389
+ GL +KA
Sbjct: 374 SVYCKHGLIKKA 385
>gi|298572960|gb|ADI88477.1| PPR protein [Silene vulgaris]
Length = 224
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 115/225 (51%), Gaps = 2/225 (0%)
Query: 150 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 209
+P + K Y ALL+ Y AK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVAAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D + +W + +
Sbjct: 61 KVEELVSEMKQKKIQLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIAPNWTTFSTM 120
Query: 270 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
+Y L AE L E IT R + Y +LI LY LGN+ ++ ++W +
Sbjct: 121 AAMYSKLGQLEKAE-QCLRNLETRITNRDRMPYHYLISLYGSLGNRGEVYRVWNIYKSVF 179
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 374
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|255584236|ref|XP_002532856.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527393|gb|EEF29534.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 185/402 (46%), Gaps = 21/402 (5%)
Query: 9 GLRRASNTKIKNRPNSDYECFFYSRFLSSGSSQNECLDEETSNSDGKDDLKSRIFRI-SL 67
G RR S I + Y+ + FL + ++ + L+ E + +++ KS RI L
Sbjct: 8 GQRRFSQA-IHRTLSIAYQNHYNFNFLCTQTTDVKILEPE----EQEENPKSLSLRIEKL 62
Query: 68 PKRSATNV-IQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSD 126
P+ + Q W+ EG ++ H + LRK + K ALE+ EW++ + + + D
Sbjct: 63 PRGEPIGLAFQSWMREGFPIHRGDVFHAINRLRKLKLNKRALEVMEWVIRERPYRPKELD 122
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQS 186
Y+ ++ TK+ GI GE+ F +P + Y L+ + E +++++
Sbjct: 123 YSYLLEFTTKLHGISHGEKLFTRIPTEFQNELLYNNLVIACLEKGVIRLSLEYMKKMREL 182
Query: 187 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 246
+ L++N ++ L+ S G+ + + ++ ++K VV + TYN+ + A N++ +
Sbjct: 183 GHPISHLIFNRLIILHSSPGRRKMIPKILTQMKADKVVRHVSTYNILMKIEANEHNVEGL 242
Query: 247 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA-EKSITQRQWITYDFL 305
K EM ++ V + L + A AE+ VEA EKS T W T D L
Sbjct: 243 IKVFGEMKRLEVEPNE-VSFCILAIAHAVARLYTVAEA--YVEAVEKSYTGDNWSTLDVL 299
Query: 306 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ--- 362
IILY L K+D+IW +++ + S++YI + ++ +G L E+ + K
Sbjct: 300 IILYGYLRKGKKLDRIWGTVKELPH-VRSKSYILAIEAFGRIGQLGRAEELWLEMKSLKG 358
Query: 363 -SATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
+T F N +L + GL +KA + + + C P
Sbjct: 359 LKSTEQF-----NSMLSIYCKCGLVKKATDIFREMDRNGCKP 395
>gi|298572050|gb|ADI88022.1| PPR protein [Silene latifolia]
Length = 224
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 116/225 (51%), Gaps = 2/225 (0%)
Query: 150 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 209
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
+V +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 EVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 270 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 374
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572048|gb|ADI88021.1| PPR protein [Silene latifolia]
Length = 224
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 116/225 (51%), Gaps = 2/225 (0%)
Query: 150 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 209
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
+V +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 EVEELVSEMKQKKISLDSYSYNIWLSTRGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 270 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 374
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|168006155|ref|XP_001755775.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693094|gb|EDQ79448.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 429
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 139/285 (48%), Gaps = 3/285 (1%)
Query: 108 LEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLY 167
+EIS+WM K +D RIDL +K+ E+ E P KT Y LL Y
Sbjct: 1 MEISDWMALEKGTKWELADNIVRIDLKSKMKQFTVAEQLLENSPPEFKTELAYHTLLKNY 60
Query: 168 AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 227
+ +KA L E++K + L +N+MM LY G K+ ++E++K V D+
Sbjct: 61 VDHQMAQKAGALLEKLKSTGLLTLPFSFNQMMLLYKRKGMENKLPEILEDMKAHGVPKDV 120
Query: 228 FTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTL 287
+TYN+ + + + +I+ ++K +E+ D D + L + A L A+ L
Sbjct: 121 YTYNILMDVKSRSGDIEGMEKIFEELKADENVKADAATFGTLATACVHAGLLEKAK-VYL 179
Query: 288 VEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 347
E E+ R YD LI Y +G+ D ++++W+ ++ + +++R+YI ++ ++ L
Sbjct: 180 KEMEEGDIFRNRSAYDILISQYGAVGDVDGVERVWEKVK-SGPIVSNRSYITVIEAFGKL 238
Query: 348 GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
G +++ E+ + QS N LL A++ GL +KA +
Sbjct: 239 GMVEKAEELYEVMSQSKGLILS-RQFNSLLSAYTRQGLMDKAEKL 282
Score = 41.2 bits (95), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 74/157 (47%), Gaps = 4/157 (2%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
++ +Y ++ + EKAEEL+E + QS + +N +++ Y G ++K ++
Sbjct: 224 SNRSYITVIEAFGKLGMVEKAEELYEVMSQSKGLILSRQFNSLLSAYTRQGLMDKAEKLM 283
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS--GGSDDWVK-YVNLVNI 272
+++++ + TY+ ++ T +D+ + E D G S W + V +++
Sbjct: 284 DDMEKLGRKKNAITYHHLVTGYLKTDQLDKAVAAMKEALVDPKQGRSKPWFETLVAVLDA 343
Query: 273 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILY 309
+ ++VNAE E +K+ + Y+ L+ Y
Sbjct: 344 FAERGNVVNAEQQ-FQEIKKAYPRLNIQVYNILLKAY 379
>gi|297849054|ref|XP_002892408.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338250|gb|EFH68667.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 536
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 165/367 (44%), Gaps = 17/367 (4%)
Query: 30 FYSRFLSSGSSQNE--CLDEETSNSDGKDDLKSRIFRISLPKR-SATNVIQRWVSEGNQA 86
F + +SS S E CL + + L RI + LPK + + +Q W+ +G
Sbjct: 40 FLTTLISSKKSPEETSCLGSDVEEEEPNKCLSVRIEK--LPKGVTVGSALQSWMGDGFPV 97
Query: 87 TVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERY 146
++ H + LRK R K ALE+ EW++ + + + +Y+ ++ K+ G+ GE+
Sbjct: 98 HGGDVYHAINRLRKLGRNKRALELMEWIIRERPYRPGELEYSYLLEFTVKLHGVSQGEKL 157
Query: 147 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 206
F +P + Y L+ A E +++++ + L+YN ++ + G
Sbjct: 158 FTRVPQEFQNELLYNNLVIACLDQGVIRLALEYMKKMRELGYRTSHLVYNRLIIRNSAPG 217
Query: 207 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 266
+ + +A + +K P + TY++ + A NID V K D M +G + V Y
Sbjct: 218 RRKLIAKDLALMKADKATPHVSTYHILMKLEANEHNIDGVLKAFDGMK-KAGVEPNEVSY 276
Query: 267 VNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 326
L + A AE+ T E EKS+T W T D L+ILY LG + ++ + W +R
Sbjct: 277 CILAMAHAVARLYTVAEAYT-EEIEKSVTGNNWSTLDILMILYGRLGKEKELVRTWNVIR 335
Query: 327 MTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ----SATSDFDISACNRLLGAFSD 382
+ S++Y+ ++ +G+L E+ + K T F N LL +
Sbjct: 336 GF-HHVRSKSYLLATEAFAQVGNLDRAEELWLEMKNVRGLKETEQF-----NSLLSVYCK 389
Query: 383 VGLTEKA 389
GL EKA
Sbjct: 390 DGLIEKA 396
>gi|224089975|ref|XP_002308888.1| predicted protein [Populus trichocarpa]
gi|222854864|gb|EEE92411.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 131/254 (51%), Gaps = 5/254 (1%)
Query: 71 SATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATR 130
S +V+ +WV+EG E+ + + LRK + + AL++SEW +K + DYA+R
Sbjct: 102 SVQSVLDKWVAEGKDLDRLEISNAMINLRKRRMFGRALQLSEWFEANKPQEFVERDYASR 161
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSF 190
+DL+ KV G+H E Y + +P S K Y LL +KAEE+F +++
Sbjct: 162 LDLIAKVRGLHKAEVYIDKIPKSFKGEVIYRTLLANCVVDHNVKKAEEVFNKMRDLEFPI 221
Query: 191 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 250
N+++ LY + + +K+A V+ ++++NV P +FTY + I + + ++ + + +
Sbjct: 222 TPFACNQLLLLYKRLDK-KKIADVLLLMEKENVKPSLFTYKILIDTKGQSNDMTGMDQIV 280
Query: 251 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE-KSITQRQWITYDFLIILY 309
+ M + G D + Y++ AE + L E E ++ + +W F++ LY
Sbjct: 281 ETMKAE-GIEPDIRTQAIMARHYVSGGLKEKAE-AILKEMEGGNLEEHRWACR-FMLPLY 337
Query: 310 AGLGNKDKIDQIWK 323
LG D++ ++WK
Sbjct: 338 GALGKADEVSRVWK 351
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 66/140 (47%), Gaps = 4/140 (2%)
Query: 140 IHSGERYFEGLPLSAK--TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 197
I E FE + + K +S Y+ LL +YA K K ++L +R+ S L ++
Sbjct: 375 IDEAEAVFELMSKTWKKLSSRHYSTLLKVYANHKMLSKGKDLIKRMGDSGCRIGPLTWDA 434
Query: 198 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL-NIDQVKKFLDEMSCD 256
++ LY+ G+VEK ++ + ++N + +++ L I AT +I +K M
Sbjct: 435 LVKLYVEAGEVEKADSILNKAVQQNKIKPMYSSFLIIMERYATKGDIHNAEKMFHRMR-Q 493
Query: 257 SGGSDDWVKYVNLVNIYITA 276
+G ++ L+ YI A
Sbjct: 494 AGYQARIRQFQTLIQAYIIA 513
>gi|297829684|ref|XP_002882724.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328564|gb|EFH58983.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 518
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 158/342 (46%), Gaps = 41/342 (11%)
Query: 58 LKSRIFRISLPKRSATNVIQRWVSE---GN-QATVSELRHILKELRKSQRYKHALEISEW 113
L SRI + K + T V++ W + GN Q S ++ I+++L S+RY+ ALE+S W
Sbjct: 41 LLSRIESAADQKAAITTVLEEWRQQQKHGNHQLNPSLVKGIVEKLHDSKRYRQALEVSNW 100
Query: 114 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYA--GAK 171
M+ K D A R L+ V G+ E++F+ +P + K YT+LL YA G
Sbjct: 101 MIEKKICNHLPEDLAVRFHLIENVLGLEEAEKFFQSIPENLKGESIYTSLLKSYAKSGEI 160
Query: 172 WTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYN 231
KAE FE++++ + YN M++LY S+ KV ++ E+K N+ D T N
Sbjct: 161 SLRKAEYTFEKMRKLGMLLRPSPYNSMVSLYSSLRNRNKVDEILREMKENNLELDSPTVN 220
Query: 232 LWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE 291
+ AA ++ + KFL DW + + E T +E
Sbjct: 221 NALRVYAAVCDVATMDKFL----------ADW-------------NAITTLEWLTTLEMA 257
Query: 292 KSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLK 351
K+ LI LY G ++ + +IW + TK+K + + ++ S L L +
Sbjct: 258 KAYR---------LIRLYGEAGEREDVYRIWDLYKNTKEK-DNEGFRALIGSLLKLDDIN 307
Query: 352 EVGEI-IDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
+I D+W+ S +FD+ L+ + G+ +KA++
Sbjct: 308 GAEKIYYDEWESSGL-EFDLRIPTMLMSGYRAKGMVKKADKL 348
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 81/155 (52%), Gaps = 2/155 (1%)
Query: 71 SATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATR 130
S ++ V NQ S+LR ++K LR S + ALE S WM + F L DYA R
Sbjct: 361 SINPFVEELVKNRNQVKPSDLRDLIKNLRDSNQLSKALEASTWMCEKRGFNLFPEDYAIR 420
Query: 131 IDLMTKVFGIHSGERYFE-GLPLSAKTSETYTALLHLYAGA-KWTEKAEELFERVKQSNL 188
L+ KV G+ E++FE +P + K Y LL Y + K KAE +FE++++
Sbjct: 421 FHLIEKVLGLEEAEKFFESSIPKNMKDYSVYDTLLTSYTRSDKTLVKAEGVFEKMRELGF 480
Query: 189 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNV 223
+N +++LY+ ++ KV ++ ++K+ N+
Sbjct: 481 LSKLSPFNSIISLYIEQRKLSKVNKLLCDMKQNNI 515
>gi|225434953|ref|XP_002281058.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial [Vitis vinifera]
Length = 550
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 180/393 (45%), Gaps = 23/393 (5%)
Query: 5 SFFLGLRRASNTKIKNRPNSDYECFFYSRFLSSGSSQNECLDEETSNSDGKDDLKSRIFR 64
SFF +RR T + + P + YS F G+ EE+S + +++ KS +R
Sbjct: 35 SFFRAIRR---TVVFSSPVNQ---IAYS-FNPFGTETAALSFEESSKPNQEEESKSLSWR 87
Query: 65 IS-LPKRSATNV-IQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVL 122
I LP+ + Q W+ EG + H + LRK + K ALE+ EW+V + +
Sbjct: 88 IEKLPRGEPVGLAFQSWMGEGCPIHRGHIFHAINRLRKLKFNKRALEVMEWVVRERPYRP 147
Query: 123 SDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFER 182
+ DY+ ++ TK+ GI GE+ F +PL + Y L+ + ++
Sbjct: 148 KELDYSYLLEFTTKLHGISQGEKLFSHVPLEFQNELLYNNLVIACLDKGVIRLSLAYMKK 207
Query: 183 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 242
+++ + L++N ++ L+ S + + + ++ ++K V + TYN+ + A N
Sbjct: 208 MRELGHPISYLVFNRLIILHSSPHRRKIIPRILTQMKADKVARHVSTYNILMKIEANEHN 267
Query: 243 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA-EKSITQRQWIT 301
I+ + K EM ++ V Y L + A AE+ VEA EKSIT W T
Sbjct: 268 IEGLVKVFGEMKQQQVEPNE-VSYCLLATAHAVAKLYTVAEA--YVEAVEKSITGNNWST 324
Query: 302 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 361
D LIILY LG +++ W ++ + S++Y+ + ++ +G L E+ + K
Sbjct: 325 LDVLIILYGYLGKPTDLERTWGIVQELPH-VRSKSYMLAIEAFGRIGQLNRAEELWLEIK 383
Query: 362 Q----SATSDFDISACNRLLGAFSDVGLTEKAN 390
+T F N ++ +S G +KA+
Sbjct: 384 SKKELKSTEQF-----NSMISVYSKHGFIDKAS 411
>gi|356503391|ref|XP_003520493.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g80270, mitochondrial-like [Glycine max]
Length = 580
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 184/426 (43%), Gaps = 53/426 (12%)
Query: 2 AARSFFLGLRRASNTKIKNRPNSDYECFFYSRFLSSGSSQNECLDEETSNSDG--KDDLK 59
A+ +F +G R S+++ D E F S + NEC D TS+ DD++
Sbjct: 52 ASLNFTVGKRALSSSRTXE--EDDLEDGF-SELETPAGDGNECDDLLTSDYADLLSDDVE 108
Query: 60 SRIFRISLPKRSATN-----------------VIQRWVSEGNQATVSELRHILKELRKSQ 102
P+R V+++W+ EGN+ T RK +
Sbjct: 109 EPHKEKERPRRGRVESKLFHEIMNAQCTSLHLVLEKWLEEGNELT---------RXRKRK 159
Query: 103 RYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTA 162
+ AL +SEW+ + KEF + DYA+R+DL+ K+ G+H E Y E +P S Y
Sbjct: 160 LFGRALLLSEWLESKKEFEFIERDYASRLDLIAKLRGLHKAEVYIETIPESCSREIMYRT 219
Query: 163 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 222
LL +KAEE+F ++K +L NE++ LY + +K+A ++ ++ +
Sbjct: 220 LLANCVSQNNVKKAEEVFSKMKDLDLPITVFTCNELLFLYKRNDK-KKIADLLLLMENEK 278
Query: 223 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 282
+ P +Y++ I + + +I + + +D M G D L YI+A
Sbjct: 279 IKPSRHSYSILIDTKGQSKDIGGMDQIVDRMKA-QGIEPDINTQAVLARHYISAGLQDKV 337
Query: 283 ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILS 342
E+ +++ Q +W+ L+ LYA LG D++ +IWK T+ Y L
Sbjct: 338 ETLLKQMEGENLKQNRWLCR-ILLPLYANLGKVDEVGRIWKVCE------TNPRYDECLG 390
Query: 343 SYLMLGHLKEVGE-------IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 395
+ G L ++ E ++ +WK S+ + C+ LL +++ + K +
Sbjct: 391 AIEAWGKLNKIDEAEKVFEMMVKKWKLSSKT------CSILLKVYANNEMLMKGKDLMKR 444
Query: 396 LLQKNC 401
+ C
Sbjct: 445 IGDGGC 450
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAK-TSETYTALLHLYAGAKWTEKAEELFERVKQSNLS 189
I+ K+ I E+ FE + K +S+T + LL +YA + K ++L +R+
Sbjct: 392 IEAWGKLNKIDEAEKVFEMMVKKWKLSSKTCSILLKVYANNEMLMKGKDLMKRIGDGGCR 451
Query: 190 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 234
L ++ ++ LY+ G+VEK V+++ +++ + +F+ L I
Sbjct: 452 IGPLTWDTIVKLYVQTGEVEKADSVLQKAAQQSQMKPMFSTYLTI 496
>gi|125599572|gb|EAZ39148.1| hypothetical protein OsJ_23575 [Oryza sativa Japonica Group]
Length = 610
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 159/347 (45%), Gaps = 10/347 (2%)
Query: 59 KSRIFRISL--PKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVT 116
+S +F+I L P S +V+ +W+ +GNQ ++ +L L+K Y+ AL+ EWM
Sbjct: 145 RSYLFQIVLDAPSNSLRHVLDKWIEDGNQLERNDAMLVLFHLKKQHMYRKALQFVEWMER 204
Query: 117 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKA 176
K DYA +DL+ + GI + ++Y + +PL + Y L+ A +KA
Sbjct: 205 GKLLNFEKRDYACHLDLIARSHGIETAQKYIKRVPLPFRNEVLYETLIVNCVLAGDIQKA 264
Query: 177 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 236
EE+F+ +K L + N+M+ LY + KVA V+ ++++NV P FTY L I
Sbjct: 265 EEVFKEIKDLCLRLTVTLCNQMILLYKRIAP-GKVASVLMLMEKENVKPSAFTYRLLIDL 323
Query: 237 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTL-VEAEKSIT 295
+ ++ ++ L+EM G + YI AE+ +EA+ S +
Sbjct: 324 KGRSNDLAGIEVVLNEMKA-YGIEPSTSTQTMVARFYIHGGLTEKAEAVVKEMEAQLSNS 382
Query: 296 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 355
+ L+ LYA L + + +IW+ M + M +++ + ++ LG +++ E
Sbjct: 383 KDGRHVIKSLLHLYAALNKPNDVARIWE---MCTEPMLE-DFLSAIKAWGELGLIEKAEE 438
Query: 356 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCA 402
+ +A N +L ++ L K +F + + C
Sbjct: 439 TFEAM-ANAPEKLSSKYYNAMLNVYAQNKLLSKGKQFVERMCRDGCP 484
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 74/157 (47%), Gaps = 9/157 (5%)
Query: 126 DYATRIDLMTKVFGIHSGERYFEGLPLSAK--TSETYTALLHLYAGAKWTEKAEELFERV 183
D+ + I ++ I E FE + + + +S+ Y A+L++YA K K ++ ER+
Sbjct: 419 DFLSAIKAWGELGLIEKAEETFEAMANAPEKLSSKYYNAMLNVYAQNKLLSKGKQFVERM 478
Query: 184 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPD---IFT-YNLWISSCAA 239
+ L ++ ++ LY++ G+VEK + + +N PD +FT Y + A
Sbjct: 479 CRDGCPNGPLTWDALINLYVNSGEVEKADSFLLNVAEEN--PDRKPLFTSYFFLMKGYAK 536
Query: 240 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
+I +K D + + G + + Y L+ Y+ A
Sbjct: 537 RGDIHNTEKIFDRLK-NVGYAPRPLHYAVLLEAYVNA 572
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 83/188 (44%), Gaps = 12/188 (6%)
Query: 162 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 221
+LLHLYA ++E + M + ++ + G++ + E +
Sbjct: 391 SLLHLYAALNKPNDVARIWEMCTEP-------MLEDFLSAIKAWGELGLIEKAEETFEAM 443
Query: 222 NVVPDIFT---YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
P+ + YN ++ A + + K+F++ M C G + + + L+N+Y+ +
Sbjct: 444 ANAPEKLSSKYYNAMLNVYAQNKLLSKGKQFVERM-CRDGCPNGPLTWDALINLYVNSGE 502
Query: 279 LVNAESSTLVEAEKSITQRQWIT-YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
+ A+S L AE++ ++ T Y FL+ YA G+ ++I+ L+ +Y
Sbjct: 503 VEKADSFLLNVAEENPDRKPLFTSYFFLMKGYAKRGDIHNTEKIFDRLKNVGYAPRPLHY 562
Query: 338 ICILSSYL 345
+L +Y+
Sbjct: 563 AVLLEAYV 570
>gi|224154848|ref|XP_002337528.1| predicted protein [Populus trichocarpa]
gi|222839519|gb|EEE77856.1| predicted protein [Populus trichocarpa]
Length = 87
Score = 107 bits (268), Expect = 7e-21, Method: Composition-based stats.
Identities = 49/64 (76%), Positives = 59/64 (92%)
Query: 108 LEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLY 167
L+ISEWMV H+EFVLSD+D+A+RIDLMTKVFG+ + ERYF+GLPL+AKT+ETYTALLH Y
Sbjct: 22 LKISEWMVAHEEFVLSDTDHASRIDLMTKVFGVDAAERYFDGLPLAAKTTETYTALLHSY 81
Query: 168 AGAK 171
A AK
Sbjct: 82 AAAK 85
>gi|449450908|ref|XP_004143204.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Cucumis sativus]
gi|449517541|ref|XP_004165804.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Cucumis sativus]
Length = 527
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 182/415 (43%), Gaps = 27/415 (6%)
Query: 1 MAARSFFLGLR--RASNTKIKNRPNSDYECFFYSRFLSSGSSQNECLDEETSNSDGKDDL 58
M SFF G R +A + + P++ F FL + N + S + L
Sbjct: 1 MPTGSFFSGYRLIQAFRRTVSSTPSAVSTIPFRFNFLCTQIPGNLSPNVLESELEEPKCL 60
Query: 59 KSRIFRISLPKRSATNVIQR-WVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTH 117
RI RI PK R W+ +G ++ H + LRK +R K ALE+ EW++
Sbjct: 61 SLRIERI--PKGELVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKRALEVMEWVIRE 118
Query: 118 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 177
K + +++ DY+ ++ K GI GE+ F +P+ + + L+ +
Sbjct: 119 KPYRINELDYSYLLEFTIKHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSL 178
Query: 178 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 237
++++ S + L++N ++ L+ S + + + ++ ++K V + TYN+ +
Sbjct: 179 AYMRKMREVGHSISHLVFNRLIILHSSFRRRKIIPKILSQMKADKVPLHVSTYNILMKIE 238
Query: 238 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA-----EK 292
A NI+ + + +M ++ V+ I A+ A+ T+VEA EK
Sbjct: 239 ANEHNIEGLMRVFSDMRRAKVEPNE-------VSYCIVATAHAVAKLYTVVEAYVEALEK 291
Query: 293 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 352
SI W TYD LIILY L + ++++ W ++ + S+++I + ++ +G L
Sbjct: 292 SIAGNNWSTYDVLIILYGYLNKEKELERTWGIIQGFPH-IPSKSFILAIEAFGRIGLLSR 350
Query: 353 VGEIIDQWKQ----SATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
E+ + K AT F N +L + GL +KA E + C P
Sbjct: 351 AEELWLEMKTKRGIKATDQF-----NSILSVYCRHGLIKKATEIFRKIEANGCKP 400
>gi|125557709|gb|EAZ03245.1| hypothetical protein OsI_25393 [Oryza sativa Indica Group]
Length = 610
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 159/347 (45%), Gaps = 10/347 (2%)
Query: 59 KSRIFRISL--PKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVT 116
+S +F+I L P S +V+ +W+ +GNQ ++ +L L+K Y+ AL+ EWM
Sbjct: 145 RSYLFQIVLDAPSNSLRHVLDKWIEDGNQLERNDAMLVLFHLKKQHMYRKALQFVEWMER 204
Query: 117 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKA 176
K DYA +DL+ + GI + ++Y + +PL + Y L+ A +KA
Sbjct: 205 GKLLNFEKRDYACHLDLIARSHGIETAQKYIKRVPLPFRNEVLYETLIVNCVLAGDIQKA 264
Query: 177 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 236
EE+F+ +K L + N+M+ LY + KVA V+ ++++NV P FTY L I
Sbjct: 265 EEVFKEIKDLCLRLTVTLCNQMILLYKRIAP-GKVASVLMLMEKENVKPSAFTYRLLIDL 323
Query: 237 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTL-VEAEKSIT 295
+ ++ ++ ++EM G + YI AE+ +EA+ S +
Sbjct: 324 KGRSNDLAGIEVVINEMKA-YGIEPSTSTQTMVARFYIHGGLTEKAEAVVKEMEAQLSNS 382
Query: 296 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 355
+ L+ LYA L + + +IW+ M + M +++ + ++ LG +++ E
Sbjct: 383 KDGRHVIKSLLHLYAALNKPNDVARIWE---MCTEPMLE-DFLSAIKAWGELGLIEKAEE 438
Query: 356 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCA 402
+ +A N +L ++ L K +F + + C
Sbjct: 439 TFEAM-ANAPEKLSSKYYNAMLNVYAQNKLLSKGKQFVERMCRDGCP 484
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 74/157 (47%), Gaps = 9/157 (5%)
Query: 126 DYATRIDLMTKVFGIHSGERYFEGLPLSAK--TSETYTALLHLYAGAKWTEKAEELFERV 183
D+ + I ++ I E FE + + + +S+ Y A+L++YA K K ++ ER+
Sbjct: 419 DFLSAIKAWGELGLIEKAEETFEAMANAPEKLSSKYYNAMLNVYAQNKLLSKGKQFVERM 478
Query: 184 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPD---IFT-YNLWISSCAA 239
+ L ++ ++ LY++ G+VEK + + +N PD +FT Y + A
Sbjct: 479 CRDGCPNGPLTWDALINLYVNSGEVEKADSFLLNVAEEN--PDRKPLFTSYFFLMKGYAK 536
Query: 240 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
+I +K D + + G + + Y L+ Y+ A
Sbjct: 537 RGDIHNTEKIFDRLK-NVGYAPRPLHYAVLLEAYVNA 572
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 83/188 (44%), Gaps = 12/188 (6%)
Query: 162 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 221
+LLHLYA ++E + M + ++ + G++ + E +
Sbjct: 391 SLLHLYAALNKPNDVARIWEMCTEP-------MLEDFLSAIKAWGELGLIEKAEETFEAM 443
Query: 222 NVVPDIFT---YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
P+ + YN ++ A + + K+F++ M C G + + + L+N+Y+ +
Sbjct: 444 ANAPEKLSSKYYNAMLNVYAQNKLLSKGKQFVERM-CRDGCPNGPLTWDALINLYVNSGE 502
Query: 279 LVNAESSTLVEAEKSITQRQWIT-YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
+ A+S L AE++ ++ T Y FL+ YA G+ ++I+ L+ +Y
Sbjct: 503 VEKADSFLLNVAEENPDRKPLFTSYFFLMKGYAKRGDIHNTEKIFDRLKNVGYAPRPLHY 562
Query: 338 ICILSSYL 345
+L +Y+
Sbjct: 563 AVLLEAYV 570
>gi|356498381|ref|XP_003518031.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Glycine max]
Length = 609
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 139/257 (54%), Gaps = 5/257 (1%)
Query: 68 PKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDY 127
P S + + +WV G + + E+ ++ELR+ + Y A ++ +W+ ++K+ +SDY
Sbjct: 154 PGLSVDSALNKWVEHGKELSRKEILLAVRELRRRKMYGRAFQLFQWLESNKKLEFMESDY 213
Query: 128 ATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN 187
A+++DL+ K+ G+ E+Y E +P S + Y LL A E++F ++K +
Sbjct: 214 ASQLDLIAKLRGLPKAEKYIESVPESFRGELLYRTLLANCASQNNLIATEKIFNKMKDLD 273
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 247
L A N+++ LY + +K+A V+ ++++NV P +FTY + I S + +I ++
Sbjct: 274 LPLTAFACNQLLLLYKKL-DKKKIADVLLLMEKENVKPSLFTYRILIDSKGQSNDIAGME 332
Query: 248 KFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE-KSITQRQWITYDFLI 306
+ + M + D ++ L+ + T+S L + L E E +++ + QW+ L+
Sbjct: 333 QVFETMKEEGFEPD--IQIQALLARHYTSSGLKEKAEAMLKEMEGENLKENQWVCAT-LL 389
Query: 307 ILYAGLGNKDKIDQIWK 323
LYA LG D++++IWK
Sbjct: 390 RLYANLGKADEVERIWK 406
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Query: 136 KVFGIHSGERYFEGLPLSAK-TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALM 194
K+ I E FE + K S+ Y+ LL +YA K K +EL + + S + L
Sbjct: 426 KLNKIEEAEAVFEMVSKKWKLNSKNYSVLLKIYANNKMLTKGKELVKLMADSGVRIGPLT 485
Query: 195 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 234
++ ++ LY+ G+VEK ++ + ++N + +FT L I
Sbjct: 486 WDALVKLYIQAGEVEKADSILHKAIQQNQLQPMFTTYLAI 525
>gi|255646331|gb|ACU23650.1| unknown [Glycine max]
Length = 80
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 58/74 (78%)
Query: 327 MTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLT 386
MTKQKM SRNY+CI+ SYLMLG KEVGE+IDQWKQS T DFD+ AC ++L F D+GL
Sbjct: 1 MTKQKMISRNYMCIIFSYLMLGFTKEVGEVIDQWKQSTTPDFDMLACKKILVVFRDIGLA 60
Query: 387 EKANEFHMLLLQKN 400
E AN +++ ++KN
Sbjct: 61 EIANNLNVIFIEKN 74
>gi|356534606|ref|XP_003535844.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Glycine max]
Length = 600
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 157/302 (51%), Gaps = 17/302 (5%)
Query: 35 LSSGSSQNECLDEETSNSDGKDD----------LKSRIFRISL--PKRSATNVIQRWVSE 82
LS G E +E SD + D + ++F++ L P S + + +W +
Sbjct: 100 LSDGDEDGEKPHDELELSDAEIDPTKKKSQARWTQLKLFKVILNAPGLSVDSALSKWAGQ 159
Query: 83 GNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHS 142
G + + E+ ++ELR+ + Y A ++ +W+ ++K+ +SDYA+++DL+ K+ G+
Sbjct: 160 GKELSRKEIFLAVRELRRRKMYGRAFQLFQWLESNKKLEFMESDYASQLDLIAKLRGLPQ 219
Query: 143 GERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY 202
E+Y E +P S + Y LL A +E++F ++K +L N+++ LY
Sbjct: 220 AEKYIESVPESFRGELLYRTLLANCASQNNLIASEKIFNKMKDLDLPLTVFACNQLLLLY 279
Query: 203 MSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 262
+ +K+A V+ ++++NV P +FTY + I S + +I +++ + M + D
Sbjct: 280 KKL-DKKKIADVLLLMEKENVKPSLFTYRILIDSKGHSNDIAGMEQVFETMKEEGFEPD- 337
Query: 263 WVKYVNLVNIYITASHLVNAESSTLVEAE-KSITQRQWITYDFLIILYAGLGNKDKIDQI 321
++ L+ + T++ L + L E E +++ ++QW+ L+ LYA LG D++++I
Sbjct: 338 -IQLQALLARHYTSAGLKEKAEAILKEIEGENLEEKQWVCAT-LLRLYANLGKADEVERI 395
Query: 322 WK 323
WK
Sbjct: 396 WK 397
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
S+ Y+ LL +YA K K ++L +R+ S L L +N ++ LY+ G+VEK V++
Sbjct: 439 SKNYSILLKIYANNKMLAKGKDLIKRMADSGLRIGPLTWNALVKLYIQAGEVEKADSVLQ 498
Query: 217 E-IKRKNVVPDIFTY 230
+ I++ + P TY
Sbjct: 499 KAIQQSQLQPMFTTY 513
>gi|307136024|gb|ADN33878.1| DNA-binding protein [Cucumis melo subsp. melo]
Length = 470
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 154/304 (50%), Gaps = 21/304 (6%)
Query: 35 LSSGSSQNECLDEETSN----SDGKDDLKSRI---------FRI--SLPKRSATNVIQRW 79
L+SGS ++ D+ET N +G+ L +I F I P S + + +W
Sbjct: 95 LTSGSEIDD--DDETQNELDLPEGETGLAEKISTKGAPSELFNIIWKAPGLSVPSALDKW 152
Query: 80 VSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFG 139
VSEG + + +++ + LR+ + + AL+ SEW+ + + V +D DYA+++DL+ K+ G
Sbjct: 153 VSEGKELSRADISLTMLYLRRRRMFGKALKFSEWLEANGKLV-TDRDYASQLDLIGKLRG 211
Query: 140 IHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMM 199
+ E Y +P S + Y LL + KAEE+F ++K A N+++
Sbjct: 212 LRMAENYISKIPKSFQGEVVYRTLLANCVMSTNVRKAEEVFNKMKDLEFPITAFACNQLL 271
Query: 200 TLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG 259
LY + +K+A V+ ++++NV P FTY + I + + +I +++ +D M + G
Sbjct: 272 LLYKRTDK-KKIADVLLLMEKENVKPSPFTYKILIDAKGLSNDISGMEQVVDTMKAE--G 328
Query: 260 SDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID 319
V + L+ + ++ L + +TL E E+ ++ FL+ LY L +D++
Sbjct: 329 IKLGVGTLLLLAKHYVSAGLKDKAKATLKETEEINSKGSRRPCRFLLPLYGELQMEDEVR 388
Query: 320 QIWK 323
++W+
Sbjct: 389 RLWE 392
>gi|297596551|ref|NP_001042753.2| Os01g0280400 [Oryza sativa Japonica Group]
gi|255673117|dbj|BAF04667.2| Os01g0280400, partial [Oryza sativa Japonica Group]
Length = 426
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 144/299 (48%), Gaps = 13/299 (4%)
Query: 106 HALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLH 165
H L++ E++ K F L + DYA+R+DL+ KV GI+ E+Y E +P S + Y LL
Sbjct: 7 HFLQLLEYVEESKLFDLGERDYASRVDLVAKVHGIYKAEKYIENVPASHRGEVVYRTLLA 66
Query: 166 LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVP 225
+K E++F ++K N+++ LY V + +K+ V+ ++++NV P
Sbjct: 67 NCVAIANVKKTEQVFNKMKDLGFPVTVFSCNQLLLLYKRVDK-KKLGDVLTMMEKENVKP 125
Query: 226 DIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESS 285
+FTY L + + A +I+ ++K + M D G D + + YI + AE +
Sbjct: 126 SLFTYKLLVDTKGAARDIEDMEKVIQAMQAD-GIEPDLLIQATIARHYIFGGYREKAE-A 183
Query: 286 TLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICI--LSS 343
L + E F++ LYA LG K +++IWK ++ +R C+ + +
Sbjct: 184 ILEQIEGDDINENRSACKFVLPLYAFLGKKADVERIWKVC-----EVNARLDECMSAIEA 238
Query: 344 YLMLGHLKEVGEIIDQ-WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 401
+ LG +++ EI + +K T F+ N +L +++ L +K E + C
Sbjct: 239 FGKLGDVEKAEEIFENMFKTWKTLSFEYY--NAMLKVYANKKLFDKGKELAKRMGDDGC 295
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKT--SETYTALLHLYAGAKWTEKAEELFERVKQSNL 188
I+ K+ + E FE + + KT E Y A+L +YA K +K +EL +R+
Sbjct: 236 IEAFGKLGDVEKAEEIFENMFKTWKTLSFEYYNAMLKVYANKKLFDKGKELAKRMGDDGC 295
Query: 189 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 234
+ ++ LY G+VEK ++ ++ KN + ++T L +
Sbjct: 296 RLGPSTLDSLVKLYSDAGEVEKADSILHKLSYKNKIKPLYTTYLML 341
>gi|91806413|gb|ABE65934.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 279
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 99/178 (55%), Gaps = 2/178 (1%)
Query: 73 TNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRID 132
T +++ +GN+ + LR ++K LR S + ALE S WM K F L DYATR+
Sbjct: 101 TLLLEEMDKKGNKVSPPGLRDLIKNLRDSNQLSKALEASTWMCQKKVFNLFSEDYATRLH 160
Query: 133 LMTKVFGIHSGERYFE-GLPLSAKTSETYTALLHLYAGAKWTE-KAEELFERVKQSNLSF 190
L KV G+ E +FE +P + K Y LL YA + T+ KAE +FE++++ L
Sbjct: 161 LTEKVLGLEEAENFFESSIPENMKDYSVYDTLLSCYARSSNTQSKAEAVFEKMRELGLQS 220
Query: 191 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 248
+N +++LY G++ V +++ ++K KN+ PDI T N + + A L ID ++K
Sbjct: 221 KLSPFNSLISLYSGQGKLSVVNILLCDMKHKNIEPDIVTRNNVLRANAYILAIDSMEK 278
>gi|449506011|ref|XP_004162628.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 613
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 166/358 (46%), Gaps = 37/358 (10%)
Query: 68 PKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDY 127
P + ++ + +WVSEG + + ++ + LRK + Y AL+ SEW+ + + + DY
Sbjct: 156 PGLTVSSALDKWVSEGKELSRDDISSAMLNLRKCRMYGKALQFSEWLEANGKLDFVEKDY 215
Query: 128 ATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN 187
A+R+DL+ K+ G+ E Y +P S + Y LL A +KAEE+F ++K
Sbjct: 216 ASRLDLIGKLRGLRMAENYIAKIPKSFQGEVVYRTLLANCVIACNVQKAEEVFNKMKDLE 275
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 247
A N+++ LY + KVA ++ ++++NV P FTY + I + + +I ++
Sbjct: 276 FPITAFACNQLLLLYKRTDK-RKVADILLLMEKENVKPSRFTYRILIDTKGLSNDITGME 334
Query: 248 KFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLII 307
+ +D M + G + V ++++ + + L + + L E E+ ++ L+
Sbjct: 335 QVVDTMKAE--GIELDVSTLSVLAKHYISGGLKDKAKAILKEMEEINSEGSRWPCRILLP 392
Query: 308 LYAGLGNKDKIDQIWK--------------------------------SLRMTKQKMTSR 335
LY L +D++ ++W+ + T +K+++R
Sbjct: 393 LYGELQMEDEVRRLWEICGSNPHIEECMAAIVAWGKLKNIQEAEKIFDRVVKTGEKLSAR 452
Query: 336 NYICILSSYLMLGHLKEVG-EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
+Y +L+ Y + G E++ Q +S S D + ++ + + G EKA+ F
Sbjct: 453 HYSTMLNVYREDSKMLTKGKEVVKQMAESG-SRMDPVTLDAVVKLYVEAGEVEKADSF 509
>gi|12321886|gb|AAG50982.1|AC073395_24 hypothetical protein, 3' partial; 101251-102939 [Arabidopsis
thaliana]
Length = 532
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 99/178 (55%), Gaps = 2/178 (1%)
Query: 73 TNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRID 132
T +++ +GN+ + LR ++K LR S + ALE S WM K F L DYATR+
Sbjct: 355 TLLLEEMDKKGNKVSPPGLRDLIKNLRDSNQLSKALEASTWMCQKKVFNLFSEDYATRLH 414
Query: 133 LMTKVFGIHSGERYFE-GLPLSAKTSETYTALLHLYAGAKWTE-KAEELFERVKQSNLSF 190
L KV G+ E +FE +P + K Y LL YA + T+ KAE +FE++++ L
Sbjct: 415 LTEKVLGLEEAENFFESSIPENMKDYSVYDTLLSCYARSSNTQSKAEAVFEKMRELGLQS 474
Query: 191 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 248
+N +++LY G++ V +++ ++K KN+ PDI T N + + A L ID ++K
Sbjct: 475 KLSPFNSLISLYSGQGKLSVVNILLCDMKHKNIEPDIVTRNNVLRANAYILAIDSMEK 532
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 142/306 (46%), Gaps = 45/306 (14%)
Query: 91 LRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGL 150
LR I+++LR S R + ALE+S+WMV K + L + D++ R L KV + E++FE +
Sbjct: 76 LRGIVEKLRSSNRPRQALEVSDWMVEQKMYNLPE-DFSARFHLTEKVLNLEEAEKFFESI 134
Query: 151 PLSAKTSETYTALLHLYA---GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 207
P + + Y +LL YA G K +KAE +F+++K+ L YN M +LY S+G
Sbjct: 135 PENMRFESMYNSLLRSYARQSGEKALKKAESVFKKMKKLGLLLRPSPYNSMTSLYSSLGN 194
Query: 208 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 267
+KV ++ E+K NV D T N + AA ++ + KFL +
Sbjct: 195 RDKVDEILREMKENNVELDNVTVNNALRVYAAVSDVATMDKFLAD--------------- 239
Query: 268 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 327
K IT+ +T + Y G + + ++W +
Sbjct: 240 -----------------------RKEITRLDGLTMLAMAKAYVRDGEIEDVHRVWDKYKA 276
Query: 328 TKQKMTSRNYICILSSYLMLGHLKEVGEI-IDQWKQSATSDFDISACNRLLGAFSDVGLT 386
T+QK + + ++ S L LG K +I ++W+ S +FD + L+ + + G+
Sbjct: 277 TRQK-DNEEFRTLIGSLLKLGDTKGAEKIYYNEWECSGL-EFDNRIPDMLVSGYREKGMV 334
Query: 387 EKANEF 392
KA++
Sbjct: 335 MKADKL 340
>gi|15229739|ref|NP_187745.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|12322901|gb|AAG51439.1|AC008153_12 hypothetical protein; 6614-8314 [Arabidopsis thaliana]
gi|332641514|gb|AEE75035.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 541
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 99/178 (55%), Gaps = 2/178 (1%)
Query: 73 TNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRID 132
T +++ +GN+ + LR ++K LR S + ALE S WM K F L DYATR+
Sbjct: 363 TLLLEEMDKKGNKVSPPGLRDLIKNLRDSNQLSKALEASTWMCQKKVFNLFSEDYATRLH 422
Query: 133 LMTKVFGIHSGERYFE-GLPLSAKTSETYTALLHLYAGAKWTE-KAEELFERVKQSNLSF 190
L KV G+ E +FE +P + K Y LL YA + T+ KAE +FE++++ L
Sbjct: 423 LTEKVLGLEEAENFFESSIPENMKDYSVYDTLLSCYARSSNTQSKAEAVFEKMRELGLQS 482
Query: 191 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 248
+N +++LY G++ V +++ ++K KN+ PDI T N + + A L ID ++K
Sbjct: 483 KLSPFNSLISLYSGQGKLSVVNILLCDMKHKNIEPDIVTRNNVLRANAYILAIDSMEK 540
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 147/306 (48%), Gaps = 39/306 (12%)
Query: 91 LRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGL 150
LR I+++LR S R + ALE+S+WMV K + L + D++ R L KV + E++FE +
Sbjct: 78 LRGIVEKLRSSNRPRQALEVSDWMVEQKMYNLPE-DFSARFHLTEKVLNLEEAEKFFESI 136
Query: 151 PLSAKTSETYTALLHLYA---GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 207
P + + Y +LL YA G K +KAE +F+++K+ L YN M +LY S+G
Sbjct: 137 PENMRFESMYNSLLRSYARQSGEKALKKAESVFKKMKKLGLLLRPSPYNSMTSLYSSLGN 196
Query: 208 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 267
+KV ++ E+K NV D T N + AA ++ + KFL +
Sbjct: 197 RDKVDEILREMKENNVELDNVTVNNALRVYAAVSDVATMDKFLAD--------------- 241
Query: 268 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 327
+ + T++ K+ Y+ L+ LY G + + ++W +
Sbjct: 242 --------RKEITRLDGLTMLAMAKA--------YE-LMSLYGEAGEIEDVHRVWDKYKA 284
Query: 328 TKQKMTSRNYICILSSYLMLGHLKEVGEI-IDQWKQSATSDFDISACNRLLGAFSDVGLT 386
T+QK + + ++ S L LG K +I ++W+ S +FD + L+ + + G+
Sbjct: 285 TRQK-DNEEFRTLIGSLLKLGDTKGAEKIYYNEWECSGL-EFDNRIPDMLVSGYREKGMV 342
Query: 387 EKANEF 392
KA++
Sbjct: 343 MKADKL 348
>gi|357439923|ref|XP_003590239.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479287|gb|AES60490.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 174/376 (46%), Gaps = 39/376 (10%)
Query: 59 KSRIFR--ISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVT 116
+S +F+ +S+ S + + +WV +G + + E+ L LR+ + Y AL+ +W+ +
Sbjct: 140 RSELFKAIVSVSGLSVDSALDKWVEKGKELSRQEIGLALNSLRRRKMYGRALQALDWLES 199
Query: 117 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKA 176
+K+ ++ +YA+++DL+ K+ G+ E+Y E +P S + Y LL A + K
Sbjct: 200 NKKLEFTEKEYASKLDLIAKLRGLPKAEKYLEHVPNSFRGELLYRTLLANCASLENLRKT 259
Query: 177 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 236
EE F ++++ A N+++ L +K+A V+ ++++NV P +TY + I
Sbjct: 260 EETFNKMRELGFPVTAFACNQLL-LIYKKIDKKKIADVLLMMEKENVKPSSYTYKILIDV 318
Query: 237 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE-KSIT 295
+ +ID + + ++ M + G D + +L Y A+ L + L E E +++
Sbjct: 319 KGLSNDIDGMSQIVETMKAE-GCELDHLTRASLARHY-AAAGLTEKTEAILKEIEGENLK 376
Query: 296 QRQWITYDFLIILYAGLGNKDKIDQIWK-------------------------------S 324
+ W+ L+ LYA LG D++++IWK
Sbjct: 377 ENMWVC-PTLLRLYAILGRADEVERIWKVCESKPRVEDCLAAIEAWGRLKKIEEAEAVFE 435
Query: 325 LRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 384
+ K K+T+RNY +L Y+ L + ++I S + + + L+ + G
Sbjct: 436 MMSNKWKLTARNYESLLKIYIRHKMLNKGKDLIKTMGDSGCT-IGPTTWDALVSLYVQAG 494
Query: 385 LTEKANEFHMLLLQKN 400
EKA+ LQ+N
Sbjct: 495 EVEKADTVLQKALQQN 510
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 140 IHSGERYFEGLPLSAK-TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEM 198
I E FE + K T+ Y +LL +Y K K ++L + + S + ++ +
Sbjct: 427 IEEAEAVFEMMSNKWKLTARNYESLLKIYIRHKMLNKGKDLIKTMGDSGCTIGPTTWDAL 486
Query: 199 MTLYMSVGQVEKVALVVEEIKRKNVVPDIFT 229
++LY+ G+VEK V+++ ++N + +FT
Sbjct: 487 VSLYVQAGEVEKADTVLQKALQQNKMKPMFT 517
>gi|357439973|ref|XP_003590264.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479312|gb|AES60515.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 557
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 174/376 (46%), Gaps = 39/376 (10%)
Query: 59 KSRIFR--ISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVT 116
+S +F+ +S+ S + + +WV +G + + E+ L LR+ + Y AL+ +W+ +
Sbjct: 91 RSELFKAIVSVSGLSVDSALDKWVEKGKELSRQEIGLALNSLRRRKMYGRALQALDWLES 150
Query: 117 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKA 176
+K+ ++ +YA+++DL+ K+ G+ E+Y E +P S + Y LL A + K
Sbjct: 151 NKKLEFTEKEYASKLDLIAKLRGLPKAEKYLEHVPNSFRGELLYRTLLANCASLENLRKT 210
Query: 177 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 236
EE F ++++ A N+++ L +K+A V+ ++++NV P +TY + I
Sbjct: 211 EETFNKMRELGFPVTAFACNQLL-LIYKKIDKKKIADVLLMMEKENVKPSSYTYKILIDV 269
Query: 237 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE-KSIT 295
+ +ID + + ++ M + G D + +L Y A+ L + L E E +++
Sbjct: 270 KGLSNDIDGMSQIVETMKAE-GCELDHLTRASLARHY-AAAGLTEKTEAILKEIEGENLK 327
Query: 296 QRQWITYDFLIILYAGLGNKDKIDQIWK-------------------------------S 324
+ W+ L+ LYA LG D++++IWK
Sbjct: 328 ENMWVC-PTLLRLYAILGRADEVERIWKVCESKPRVEDCLAAIEAWGRLKKIEEAEAVFE 386
Query: 325 LRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 384
+ K K+T+RNY +L Y+ L + ++I S + + + L+ + G
Sbjct: 387 MMSNKWKLTARNYESLLKIYIRHKMLNKGKDLIKTMGDSGCT-IGPTTWDALVSLYVQAG 445
Query: 385 LTEKANEFHMLLLQKN 400
EKA+ LQ+N
Sbjct: 446 EVEKADTVLQKALQQN 461
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 140 IHSGERYFEGLPLSAK-TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEM 198
I E FE + K T+ Y +LL +Y K K ++L + + S + ++ +
Sbjct: 378 IEEAEAVFEMMSNKWKLTARNYESLLKIYIRHKMLNKGKDLIKTMGDSGCTIGPTTWDAL 437
Query: 199 MTLYMSVGQVEKVALVVEEIKRKNVVPDIFT 229
++LY+ G+VEK V+++ ++N + +FT
Sbjct: 438 VSLYVQAGEVEKADTVLQKALQQNKMKPMFT 468
>gi|8778536|gb|AAF79544.1|AC022464_2 F22G5.3 [Arabidopsis thaliana]
Length = 555
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 177/414 (42%), Gaps = 31/414 (7%)
Query: 1 MAARSFFL-GLRRAS--NTKIKNRPNSDYECFFYSRFLSSGSSQNECLDEETSNSDGKDD 57
M R +F+ +RR + + N+ N F + S S + C+ E +
Sbjct: 8 MRQREYFVQAIRRTTCVASPALNQTNFQASSFLTTLISSKKSPEETCIGSEEEEEEPNKC 67
Query: 58 LKSRIFRISLPKR-SATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEIS----- 111
L RI + LPK + + +Q W+ +G ++ H + LRK R K ALE+S
Sbjct: 68 LSLRIEK--LPKGVTVGSALQSWMGDGFPVHGGDVYHAINRLRKLGRNKRALEMSNLGML 125
Query: 112 ----------------EWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAK 155
EW++ + + L + +Y+ ++ K+ G+ GE+ F +P +
Sbjct: 126 LDRNEFLLMKILLNLMEWIIRERPYRLGELEYSYLLEFTVKLHGVSQGEKLFTRVPQEFQ 185
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
Y L+ A E +++++ + L+YN ++ + G+ + +A +
Sbjct: 186 NELLYNNLVIACLDQGVIRLALEYMKKMRELGYRTSHLVYNRLIIRNSAPGRRKLIAKDL 245
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275
+K P + TY++ + A NID V K D M +G + V Y L +
Sbjct: 246 ALMKADKATPHVSTYHILMKLEANEHNIDGVLKAFDGMK-KAGVEPNEVSYCILAMAHAV 304
Query: 276 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
A AE+ T E EKSIT W T D L+ILY LG + ++ + W +R + S+
Sbjct: 305 ARLYTVAEAYT-EEIEKSITGDNWSTLDILMILYGRLGKEKELARTWNVIR-GFHHVRSK 362
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
+Y+ ++ +G+L E+ + K + N LL + GL EKA
Sbjct: 363 SYLLATEAFARVGNLDRAEELWLEMKNVKGLK-ETEQFNSLLSVYCKDGLIEKA 415
>gi|297800434|ref|XP_002868101.1| hypothetical protein ARALYDRAFT_915040 [Arabidopsis lyrata subsp.
lyrata]
gi|297313937|gb|EFH44360.1| hypothetical protein ARALYDRAFT_915040 [Arabidopsis lyrata subsp.
lyrata]
Length = 495
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 160/365 (43%), Gaps = 43/365 (11%)
Query: 23 NSDYECFFYSRFLSSGSSQNECLDEETSNSDGKDDLKSRIFRISLPKRSATNVIQRWVSE 82
+S+ C F S S + QN L SRI S T ++ W +
Sbjct: 17 HSNRSCLFRSYGTVSAADQN---------------LPSRIVTNSNQNAHITPMLASWQKQ 61
Query: 83 GNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHS 142
G+Q S+LR +K LR S ++ ALE SEWM K F + DY+ R+ L+ V G+
Sbjct: 62 GHQVKPSDLRGFIKNLRGSNQFSKALEASEWMGEQKVFDIVPEDYSARLHLVENVLGLEE 121
Query: 143 GERYFEGLPLSAKTSETYTALLHLYAGAKWT-EKAEELFERVKQSNLSFNALMYNEMMTL 201
E++F+ +P + Y LL Y ++ T +KAE FE++++ +N M++L
Sbjct: 122 AEKFFKSIPKNMTDYFVYATLLSSYTKSENTLDKAEATFEKMRELGFLLKPSPFNSMISL 181
Query: 202 YMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD 261
Y + +++ V +V E++ V D T N + A T I ++ F
Sbjct: 182 YGQLQKLDMVEKLVREMQETKVECDSPTVNNVLRVYADTCKIKAMETF-----------K 230
Query: 262 DWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL-GNKDKIDQ 320
WV + E T+V K+ + I + I +Y + G++ ++ +
Sbjct: 231 TWVD-----------EQGIKLEGGTIVAMAKAYLRSGSI--EKAIEMYGNVAGSEKEVYR 277
Query: 321 IWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAF 380
+W + + K+ Y +LSS L L +++ +I ++WK D+S + LL +
Sbjct: 278 LWDEYK-KETKVNDNGYRTVLSSLLKLDNVQGAEKIYEEWKPEG-PKLDMSIPSLLLSRY 335
Query: 381 SDVGL 385
G+
Sbjct: 336 YAEGM 340
>gi|5103846|gb|AAD39676.1|AC007591_41 F9L1.43 [Arabidopsis thaliana]
Length = 623
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 152/297 (51%), Gaps = 13/297 (4%)
Query: 60 SRIFR--ISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTH 117
S +F+ +S+ S + + +WV +G E + +LRK + + AL+++EW+ +
Sbjct: 157 SEMFKAIVSVSGLSVGSALDKWVEQGKDTNRKEFESAMLQLRKRRMFGRALQMTEWLDEN 216
Query: 118 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 177
K+F + + DYA R+DL++KV G + GE Y + +P S + Y LL + AE
Sbjct: 217 KQFEMEERDYACRLDLISKVRGWYKGEAYIKTIPESFRGELVYRTLLANHVATSNVRTAE 276
Query: 178 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 237
+F ++K + N+M+ LY V + +K+A V+ ++++N+ P++ TY + I +
Sbjct: 277 AVFNKMKDLGFPLSTFTCNQMLILYKRVDK-KKIADVLLLLEKENLKPNLNTYKILIDTK 335
Query: 238 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE-KSITQ 296
++ +I +++ ++ M S G + ++ L+ + ++ L L E E +S+ +
Sbjct: 336 GSSNDITGMEQIVETMK--SEGVELDLRARALIARHYASAGLKEKAEKVLKEMEGESLEE 393
Query: 297 RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 353
+ + D L + Y L +D++ ++WK + Y +L++ L G + +V
Sbjct: 394 NRHMCKDLLSV-YGYLQREDEVRRVWKICEENPR------YNEVLAAILAFGKIDKV 443
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 67/144 (46%), Gaps = 4/144 (2%)
Query: 136 KVFGIHSGERYFEG-LPLSAK-TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 193
K+ + E FE L +S + +S Y+ LL +Y K + ++L +++ S + AL
Sbjct: 439 KIDKVKDAEAVFEKVLKMSHRVSSNVYSVLLRVYVDHKMVSEGKDLVKQMSDSGCNIGAL 498
Query: 194 MYNEMMTLYMSVGQVEKV-ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 252
++ ++ LY+ G+VEK + + + I+ K + P + ++ + ++ +K
Sbjct: 499 TWDAVIKLYVEAGEVEKAESSLSKAIQSKQIKPLMSSFMYLMHEYVRRGDVHNTEKIFQR 558
Query: 253 MSCDSGGSDDWVKYVNLVNIYITA 276
M S W Y L+ Y+ A
Sbjct: 559 MKQAGYQSRFWA-YQTLIQAYVNA 581
>gi|145335742|ref|NP_173001.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806396|sp|Q9XI21.2|PPR44_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g15480, mitochondrial; Flags: Precursor
gi|332191207|gb|AEE29328.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 594
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 152/297 (51%), Gaps = 13/297 (4%)
Query: 60 SRIFR--ISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTH 117
S +F+ +S+ S + + +WV +G E + +LRK + + AL+++EW+ +
Sbjct: 128 SEMFKAIVSVSGLSVGSALDKWVEQGKDTNRKEFESAMLQLRKRRMFGRALQMTEWLDEN 187
Query: 118 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 177
K+F + + DYA R+DL++KV G + GE Y + +P S + Y LL + AE
Sbjct: 188 KQFEMEERDYACRLDLISKVRGWYKGEAYIKTIPESFRGELVYRTLLANHVATSNVRTAE 247
Query: 178 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 237
+F ++K + N+M+ LY V + +K+A V+ ++++N+ P++ TY + I +
Sbjct: 248 AVFNKMKDLGFPLSTFTCNQMLILYKRVDK-KKIADVLLLLEKENLKPNLNTYKILIDTK 306
Query: 238 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE-KSITQ 296
++ +I +++ ++ M S G + ++ L+ + ++ L L E E +S+ +
Sbjct: 307 GSSNDITGMEQIVETMK--SEGVELDLRARALIARHYASAGLKEKAEKVLKEMEGESLEE 364
Query: 297 RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 353
+ + D L + Y L +D++ ++WK + Y +L++ L G + +V
Sbjct: 365 NRHMCKDLLSV-YGYLQREDEVRRVWKICEENPR------YNEVLAAILAFGKIDKV 414
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 67/144 (46%), Gaps = 4/144 (2%)
Query: 136 KVFGIHSGERYFEG-LPLSAK-TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 193
K+ + E FE L +S + +S Y+ LL +Y K + ++L +++ S + AL
Sbjct: 410 KIDKVKDAEAVFEKVLKMSHRVSSNVYSVLLRVYVDHKMVSEGKDLVKQMSDSGCNIGAL 469
Query: 194 MYNEMMTLYMSVGQVEKV-ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 252
++ ++ LY+ G+VEK + + + I+ K + P + ++ + ++ +K
Sbjct: 470 TWDAVIKLYVEAGEVEKAESSLSKAIQSKQIKPLMSSFMYLMHEYVRRGDVHNTEKIFQR 529
Query: 253 MSCDSGGSDDWVKYVNLVNIYITA 276
M S W Y L+ Y+ A
Sbjct: 530 MKQAGYQSRFWA-YQTLIQAYVNA 552
>gi|22331104|ref|NP_188178.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273796|sp|Q9LRP6.1|PP234_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g15590, mitochondrial; Flags: Precursor
gi|11994226|dbj|BAB01348.1| DNA-binding protein [Arabidopsis thaliana]
gi|20856658|gb|AAM26678.1| AT3g15590/MQD17_5 [Arabidopsis thaliana]
gi|27363266|gb|AAO11552.1| At3g15590/MQD17_5 [Arabidopsis thaliana]
gi|332642175|gb|AEE75696.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 610
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 146/289 (50%), Gaps = 9/289 (3%)
Query: 38 GSSQNECLDEETSNSDGKDDLKSR----IFRISLPKRSATNVIQRWVSEGNQATVSELRH 93
GS ++ EE + DG K R ++ + +S +V+++WV EG + +E+
Sbjct: 119 GSDNDDLEIEEKHSKDGGKPTKKRGQSELYESIVAYKSVKHVLEKWVKEGKDLSQAEVTL 178
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLS 153
+ LRK + Y L++ EW+ + +F ++++YA+++DL+ KV + E + + +P S
Sbjct: 179 AIHNLRKRKSYAMCLQLWEWLGANTQFEFTEANYASQLDLVAKVHSLQKAEIFLKDIPES 238
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
++ Y LL KAE++F ++K+ + N+++ LY S+ +K++
Sbjct: 239 SRGEVVYRTLLANCVLKHHVNKAEDIFNKMKELKFPTSVFACNQLLLLY-SMHDRKKISD 297
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
V+ ++R+N+ P TY+ I+S +I ++K ++ + + D ++ + L Y
Sbjct: 298 VLLLMERENIKPSRATYHFLINSKGLAGDITGMEKIVETIKEEGIELDPELQSI-LAKYY 356
Query: 274 ITASHLVNAESSTLVEAE-KSITQRQWITYDFLIILYAGLGNKDKIDQI 321
I A L + E E K + Q W+ L+ LYA +G+ D + ++
Sbjct: 357 IRAG-LKERAQDLMKEIEGKGLQQTPWVCRS-LLPLYADIGDSDNVRRL 403
>gi|297746078|emb|CBI16134.3| unnamed protein product [Vitis vinifera]
Length = 453
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 165/357 (46%), Gaps = 17/357 (4%)
Query: 5 SFFLGLRRASNTKIKNRPNSDYECFFYSRFLSSGSSQNECLDEETSNSDGKDDLKSRIFR 64
SFF +RR T + + P + YS F G+ EE+S + +++ KS +R
Sbjct: 11 SFFRAIRR---TVVFSSPVNQ---IAYS-FNPFGTETAALSFEESSKPNQEEESKSLSWR 63
Query: 65 I-SLPKRSATNV-IQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVL 122
I LP+ + Q W+ EG + H + LRK + K ALE+ EW+V + +
Sbjct: 64 IEKLPRGEPVGLAFQSWMGEGCPIHRGHIFHAINRLRKLKFNKRALEVMEWVVRERPYRP 123
Query: 123 SDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFER 182
+ DY+ ++ TK+ GI GE+ F +PL + Y L+ + ++
Sbjct: 124 KELDYSYLLEFTTKLHGISQGEKLFSHVPLEFQNELLYNNLVIACLDKGVIRLSLAYMKK 183
Query: 183 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 242
+++ + L++N ++ L+ S + + + ++ ++K V + TYN+ + A N
Sbjct: 184 MRELGHPISYLVFNRLIILHSSPHRRKIIPRILTQMKADKVARHVSTYNILMKIEANEHN 243
Query: 243 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA-EKSITQRQWIT 301
I+ + K EM ++ V Y L + A AE+ VEA EKSIT W T
Sbjct: 244 IEGLVKVFGEMKQQQVEPNE-VSYCLLATAHAVAKLYTVAEA--YVEAVEKSITGNNWST 300
Query: 302 YDFLIILYAGLGNKDKIDQIWKS---LRMTKQKMTSRNYICILSSYLMLGHLKEVGE 355
D LIILY LG ++ + ++ R+ + N IC+ ++ L L E+G+
Sbjct: 301 LDVLIILYGYLGKPTDLEPLVRNKVKKRVEINRAIQFNDICLFQTWEALKTL-ELGK 356
>gi|297834428|ref|XP_002885096.1| hypothetical protein ARALYDRAFT_479008 [Arabidopsis lyrata subsp.
lyrata]
gi|297330936|gb|EFH61355.1| hypothetical protein ARALYDRAFT_479008 [Arabidopsis lyrata subsp.
lyrata]
Length = 605
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 142/290 (48%), Gaps = 4/290 (1%)
Query: 32 SRFLSSGSSQNECLDEETSNSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSEL 91
S F S +S N+ L+ E K +S ++ + +S +V+++WV EG + +E+
Sbjct: 113 SLFESEVASDNDGLEIEGGKPT-KKRAQSELYESIVAYKSVKHVLEKWVKEGKDLSQAEV 171
Query: 92 RHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLP 151
+ LRK + Y L++ EW+ + +F ++++YA+++DL+ KV + E + + +P
Sbjct: 172 SLAIFHLRKRKYYAMCLQLWEWLGANTQFEFTEANYASQLDLVAKVHSLQKAENFLKDIP 231
Query: 152 LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 211
S + Y LL KAE+LF ++K+ + N+++ LY S+ +K+
Sbjct: 232 ESFRGEVVYRTLLANCVLKHHVNKAEDLFNKMKELKFPTSVFACNQLLLLY-SMHDRKKI 290
Query: 212 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
+ V+ ++R+N+ P TY I+S +I ++K ++ M + G D L
Sbjct: 291 SDVLLLMERENIKPSRGTYQFLINSKGLAGDITGMEKIVETMK-EEGIEVDPELQATLAK 349
Query: 272 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQI 321
YI A A+ K + Q W+ L+ LYA +G+ D + ++
Sbjct: 350 YYIRAGLKERAQDLMKEIEGKGLQQTPWVCRS-LLPLYADIGDSDNVRRL 398
>gi|302798913|ref|XP_002981216.1| hypothetical protein SELMODRAFT_53460 [Selaginella moellendorffii]
gi|300151270|gb|EFJ17917.1| hypothetical protein SELMODRAFT_53460 [Selaginella moellendorffii]
Length = 463
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 140/294 (47%), Gaps = 4/294 (1%)
Query: 74 NVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDL 133
+++ +W++EG ++ E+ +K L+ R+K A EIS+W++ + L + +DL
Sbjct: 24 HILHQWIAEGRESH-GEIIAAMKRLKWLGRFKQAYEISDWVIKERSLELQKFHFINHLDL 82
Query: 134 MTKVFGIHSGERYF-EGLP-LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFN 191
+V +++ + + +P + AK+ + Y KA + + +K+ NL
Sbjct: 83 TGRVVNMNAAKNFLLTKMPRVYAKSEAALITMFENYVIHSLLSKARLVLKLMKEKNLLTT 142
Query: 192 ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 251
A +N++ LY + + + + +++ E++ + P++ TYN+ I A + + +++
Sbjct: 143 ATAFNKLFHLYANKKKEDGIPVILREMRDMRISPNVETYNILIGIKAKKGDTEGMERLFS 202
Query: 252 EMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAG 311
+M CD G+ + L + Y+ A A + Q +D +I LYA
Sbjct: 203 KMKCDGDGTPNCEILCTLASGYVNAGDHEKAMAYLKEAVASEEFQESRRVHDKVIALYAA 262
Query: 312 LGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 365
+G D ID+IW+ R +++ +Y+ +++Y +G + ++ + + T
Sbjct: 263 MGRADMIDRIWRFTRRFPV-VSANSYVATIAAYEKVGRIDRAEKVFAELTEKRT 315
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 96/258 (37%), Gaps = 33/258 (12%)
Query: 22 PNSDYECFFYSRFLSSGSSQNECLDEETSNSDGKDDLKSRIFRISLPKRSATNVIQRWVS 81
PN + C S ++++G D E + + K+ + S F+ S +R VI + +
Sbjct: 212 PNCEILCTLASGYVNAG-------DHEKAMAYLKEAVASEEFQES--RRVHDKVIALYAA 262
Query: 82 EGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIH 141
G + + W T + V+S + Y I KV I
Sbjct: 263 MGRADMIDRI---------------------WRFTRRFPVVSANSYVATIAAYEKVGRID 301
Query: 142 SGERYFEGL--PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMM 199
E+ F L + Y L Y KAE+L ER++ N N L Y+ ++
Sbjct: 302 RAEKVFAELTEKRTLLRPAHYVPLFRAYCEGGEMGKAEKLLERIRHGNGHINNLSYHHLV 361
Query: 200 TLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG 259
YM G + A + + + V P T L + A ++ + +M +S
Sbjct: 362 AGYMKSGNPKMAAETLNRMFEERVPPCFDTVMLILKEHAKNADVSSAELLFQDMRRES-Y 420
Query: 260 SDDWVKYVNLVNIYITAS 277
+ + Y +L+ Y+ A
Sbjct: 421 NKNVAAYNSLLEAYVNAG 438
>gi|22165078|gb|AAM93695.1| putative leaf protein [Oryza sativa Japonica Group]
Length = 372
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 146/313 (46%), Gaps = 31/313 (9%)
Query: 109 EISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYA 168
++S WM LS D A R++L+TKV+G+ YF+ +P K + Y +LL YA
Sbjct: 29 QLSMWMTERLHLHLSPGDVANRLELITKVYGLDRAVEYFDSMPDQLKQQQCYGSLLKCYA 88
Query: 169 GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIF 228
A EKAEELFE+++ ++ ++ YN MM LY+ GQVE+V + + ++ +VPD+
Sbjct: 89 EANCVEKAEELFEKMRGMGMA-SSYAYNVMMRLYLQNGQVERVHSMHQAMEESGIVPDVS 147
Query: 229 TYN----------LWISSCAATLNIDQVKKFLDEM-SCDSGGSDDWVKYVNLVNIYITAS 277
T + +++ +I ++ L++ SC+S Y+ + + + +
Sbjct: 148 TTHTLVAVLRKKKTLVAAYVVAEDIKAIENVLEKANSCNS-------MYMCRIGVLLKMN 200
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK----IDQIWKSLRMTKQKMT 333
+V AE + K + + + L+ Y G DK +DQ K RM
Sbjct: 201 DMVGAEKAYEEWESKHVYHDSRLI-NLLVDAYCKEGLMDKAEALVDQFIKKGRMPFANTC 259
Query: 334 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRL--LGAFSDVGLTEKANE 391
+ + Y +G + + ++ + SA++++ N L L F++ E A E
Sbjct: 260 YK----LAGGYFKVGQVSKAADLTKKALASASNEWIPDLTNVLMSLNYFAEQKNVEAAEE 315
Query: 392 FHMLLLQKNCAPT 404
M LLQ+ PT
Sbjct: 316 M-MSLLQRLVTPT 327
>gi|414884017|tpg|DAA60031.1| TPA: hypothetical protein ZEAMMB73_016344 [Zea mays]
Length = 703
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 156/325 (48%), Gaps = 15/325 (4%)
Query: 71 SATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATR 130
S V+ WV GN+ ++ +L LRK + Y AL+ EW+ K + DYA+
Sbjct: 261 SLMPVLDGWVKIGNRLERDKVNMVLFHLRKQRMYNKALKFVEWIERRKLLNFEERDYASH 320
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSF 190
+DL+ + +G+ + ++Y E +P + ++ Y LL +KAE++F +++ +L
Sbjct: 321 LDLIARNYGVEAAQKYIERVPEAFRSEVLYETLLVNCVCRDDAQKAEQVFNEIRELSLPL 380
Query: 191 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 250
N+M+ LY V + KV ++ ++++N+ IFTY L I + +I +++ L
Sbjct: 381 TISACNQMLLLYKRVSR-NKVVDILTLMEKENIKYSIFTYKLMIDLKVRSNDILGMEQVL 439
Query: 251 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYA 310
+ M ++G ++ + YI+ AE ++ A + + L+ LYA
Sbjct: 440 NSMK-ENGLEPNFTIQTMVAKFYISGCFTEKAEE--VINAMEVHVKANRHAVRSLLDLYA 496
Query: 311 GLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS---ATSD 367
LG ++++W K + +++ + ++ LGH++ EI D ++ TS
Sbjct: 497 ILGRPVDVERVWNLCAEPKLE----DFLAAIKAWSKLGHIERAEEIFDVLVKTFPKLTSK 552
Query: 368 FDISACNRLLGAFSDVGLTEKANEF 392
+ N +L +++ L +K+ +F
Sbjct: 553 Y----FNAMLEVYAENKLLDKSKKF 573
Score = 37.7 bits (86), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 64/134 (47%), Gaps = 8/134 (5%)
Query: 126 DYATRIDLMTKVFGIHSGERYFEGL--PLSAKTSETYTALLHLYAGAKWTEKAEELFERV 183
D+ I +K+ I E F+ L TS+ + A+L +YA K +K+++ ER+
Sbjct: 518 DFLAAIKAWSKLGHIERAEEIFDVLVKTFPKLTSKYFNAMLEVYAENKLLDKSKKFIERM 577
Query: 184 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPD---IF-TYNLWISSCAA 239
+ L ++ ++ LY+++G++ K + + N PD +F +Y + + + A
Sbjct: 578 CLDGCTIGPLTWDAVVKLYVNLGELSKADSFLMNVTEDN--PDRHPLFSSYVILLKAYAE 635
Query: 240 TLNIDQVKKFLDEM 253
+I +K D +
Sbjct: 636 KGDIHNAEKIFDRV 649
>gi|449437992|ref|XP_004136774.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 604
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 155/336 (46%), Gaps = 21/336 (6%)
Query: 71 SATNVIQRWVSEGNQATVSEL-RHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYAT 129
S + + +WVSEG + L H++ + + SEW+ + + + DYA+
Sbjct: 155 SVPSALDKWVSEGKDLNICFLFYHLIACISV-----WVSQFSEWLEANGQLEFNQRDYAS 209
Query: 130 RIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLS 189
R+DL+ KV G+ E Y +P S + + LL Y A +KAEE+F ++K
Sbjct: 210 RLDLIAKVQGLPKAESYIAKIPQSFQGEVIHRTLLANYVAANNVKKAEEVFNKMKDLEFP 269
Query: 190 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 249
+++M+ LY + + K+A ++ ++++NV P FTY + I + +I +++
Sbjct: 270 MTPFAHDQMLILYKRIDK-RKLADILSLMEKENVKPSPFTYKILIDAKGLCNDISGMEQV 328
Query: 250 LDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILY 309
+D M + D V ++L+ + ++ L + L + E++ ++ + L+ LY
Sbjct: 329 VDSMKAEGIKPD--VSTLSLLAKHYVSNGLKDKAKVILKDMEENNSKGSRLPCRILLPLY 386
Query: 310 AGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ----WKQSAT 365
L +D++ ++WK S + + ++ L +++E +I D+ WK+ +T
Sbjct: 387 GALQMEDEVRRLWKICEANPHMEES---MAAIVAWGKLKNVQEAEKIFDRFVKTWKKPST 443
Query: 366 SDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 401
+ N ++ + + K E + + C
Sbjct: 444 RHY-----NTMMNVYGGSKMLTKGKELVNQMAESGC 474
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 58/116 (50%), Gaps = 3/116 (2%)
Query: 136 KVFGIHSGERYFEGLPLSAKTSET--YTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 193
K+ + E+ F+ + K T Y ++++Y G+K K +EL ++ +S + L
Sbjct: 420 KLKNVQEAEKIFDRFVKTWKKPSTRHYNTMMNVYGGSKMLTKGKELVNQMAESGCRMDEL 479
Query: 194 MYNEMMTLYMSVGQVEKV-ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 248
++ ++ LY+ G+VEK + +V+ + + P TY + A+ ++ V+K
Sbjct: 480 TWDAVVKLYVEAGEVEKADSFLVKAVLQNKKKPMFTTYITLMDRYASRGDVPNVEK 535
>gi|302801860|ref|XP_002982686.1| hypothetical protein SELMODRAFT_53462 [Selaginella moellendorffii]
gi|300149785|gb|EFJ16439.1| hypothetical protein SELMODRAFT_53462 [Selaginella moellendorffii]
Length = 463
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 145/295 (49%), Gaps = 6/295 (2%)
Query: 74 NVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDL 133
+++ +W++EG ++ E+ +K L+ R+K A EIS+W++ + L + ++L
Sbjct: 24 HILHQWIAEGRESH-GEIIAAMKRLKWLGRFKQAYEISDWVIKERSLELQKFHFINHLEL 82
Query: 134 MTKVFGIHSGERYF-EGLP-LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFN 191
+V +++ + + +P + AK+ + Y KA + + +K+ NL
Sbjct: 83 TGRVVNMNAAKNFLLTKMPRVYAKSEAALITMFENYVIHSLLSKARLVLKLMKEKNLLTT 142
Query: 192 ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 251
A +N++ LY + + + + +++ E++ + P++ TYN+ I A + + +++
Sbjct: 143 ATAFNKLFHLYANKKKEDGIPVILREMRDMRISPNVETYNILIGIKAKKGDTEGMERLFS 202
Query: 252 EMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQ-WITYDFLIILYA 310
+M CD G+ + L + Y+ A A + L EA S R+ +D +I LYA
Sbjct: 203 KMKCDGDGTPNGEILCTLASGYVNAGDHEKA-MAYLKEAVASDEFRESRRVHDKVIALYA 261
Query: 311 GLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 365
+G D ID+IW+ R +++ +Y+ +++Y +G + ++ + + T
Sbjct: 262 AMGRADMIDRIWRFTRRFPV-VSANSYVATIAAYEKVGRIDRAEKVFAELTEKRT 315
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 97/258 (37%), Gaps = 33/258 (12%)
Query: 22 PNSDYECFFYSRFLSSGSSQNECLDEETSNSDGKDDLKSRIFRISLPKRSATNVIQRWVS 81
PN + C S ++++G D E + + K+ + S FR S +R VI + +
Sbjct: 212 PNGEILCTLASGYVNAG-------DHEKAMAYLKEAVASDEFRES--RRVHDKVIALYAA 262
Query: 82 EGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIH 141
G + + W T + V+S + Y I KV I
Sbjct: 263 MGRADMIDRI---------------------WRFTRRFPVVSANSYVATIAAYEKVGRID 301
Query: 142 SGERYFEGL--PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMM 199
E+ F L + Y L Y KAE+L ER++ N N L Y+ ++
Sbjct: 302 RAEKVFAELTEKRTLLRPAHYVPLFRAYCEGGEMGKAEKLLERIRHGNGHINNLSYHHLV 361
Query: 200 TLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG 259
YM G + A + + + V P T L + A +++ + +M +S
Sbjct: 362 AGYMKSGNPKMAAETLTRMFEERVPPCFDTVMLILKEHAKNADVNSAELLFQDMRRES-Y 420
Query: 260 SDDWVKYVNLVNIYITAS 277
+ + Y +L+ Y+ A
Sbjct: 421 NKNVAAYNSLLEAYVNAG 438
>gi|449437712|ref|XP_004136635.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 160/358 (44%), Gaps = 37/358 (10%)
Query: 68 PKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDY 127
P + ++ + +WVSEG + + ++ + LRK + Y AL+ SEW+ + + + DY
Sbjct: 148 PGLTVSSALDKWVSEGKELSRDDISSAMLNLRKCRMYGKALQFSEWLEANGKLDFVEKDY 207
Query: 128 ATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN 187
A+R+DL+ K+ G+ E Y +P S + Y LL A KAE++F ++K
Sbjct: 208 ASRLDLIGKLRGLRMAENYIAKIPKSFQGEVVYQTLLVNCVIASNVHKAEKVFNKMKNLE 267
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 247
A N+++ LY + K+A V+ +K++NV TY + I + +I ++
Sbjct: 268 FPITAFACNQLLLLYKRTDK-RKIADVLLLMKKENVKYSTSTYRILIDVNGLSNDITGME 326
Query: 248 KFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLII 307
+ +D M + G D LV Y++ L + + L E E+ ++ L+
Sbjct: 327 EVVDSMKAE-GIKLDVETLSRLVKHYVSGG-LKDKAKAILKEMEEINSEGSRWPCRILLP 384
Query: 308 LYAGLGNKDKIDQIWK--------------------------------SLRMTKQKMTSR 335
LY L +D++ ++W+ + T +K+++R
Sbjct: 385 LYGELQMEDEVRRLWEICGSNPHIEECMAAIVAWGKLKNIQEAEKIFDRVVKTGEKLSAR 444
Query: 336 NYICILSSYLMLGHLKEVG-EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
+Y +L+ Y + G E++ Q +S S D + ++ + + G EKA+ F
Sbjct: 445 HYSTMLNVYREDSKMLTKGKEVVKQMAESG-SRMDPVTLDAVVKLYVEAGEVEKADSF 501
>gi|78708864|gb|ABB47839.1| expressed protein [Oryza sativa Japonica Group]
gi|215701127|dbj|BAG92551.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 341
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 143/309 (46%), Gaps = 31/309 (10%)
Query: 113 WMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKW 172
WM LS D A R++L+TKV+G+ YF+ +P K + Y +LL YA A
Sbjct: 2 WMTERLHLHLSPGDVANRLELITKVYGLDRAVEYFDSMPDQLKQQQCYGSLLKCYAEANC 61
Query: 173 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYN- 231
EKAEELFE+++ ++ ++ YN MM LY+ GQVE+V + + ++ +VPD+ T +
Sbjct: 62 VEKAEELFEKMRGMGMA-SSYAYNVMMRLYLQNGQVERVHSMHQAMEESGIVPDVSTTHT 120
Query: 232 ---------LWISSCAATLNIDQVKKFLDEM-SCDSGGSDDWVKYVNLVNIYITASHLVN 281
+++ +I ++ L++ SC+S Y+ + + + + +V
Sbjct: 121 LVAVLRKKKTLVAAYVVAEDIKAIENVLEKANSCNS-------MYMCRIGVLLKMNDMVG 173
Query: 282 AESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK----IDQIWKSLRMTKQKMTSRNY 337
AE + K + + + L+ Y G DK +DQ K RM +
Sbjct: 174 AEKAYEEWESKHVYHDSRLI-NLLVDAYCKEGLMDKAEALVDQFIKKGRMPFANTCYK-- 230
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRL--LGAFSDVGLTEKANEFHML 395
+ Y +G + + ++ + SA++++ N L L F++ E A E M
Sbjct: 231 --LAGGYFKVGQVSKAADLTKKALASASNEWIPDLTNVLMSLNYFAEQKNVEAAEEM-MS 287
Query: 396 LLQKNCAPT 404
LLQ+ PT
Sbjct: 288 LLQRLVTPT 296
>gi|357139769|ref|XP_003571450.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Brachypodium distachyon]
Length = 517
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 162/356 (45%), Gaps = 18/356 (5%)
Query: 53 DGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISE 112
+ + L R+ R S SA I+ W++ G + H + LR+ + ++ L++ E
Sbjct: 49 EQEGSLAQRLERAS----SACAAIRGWMAAGRAVHRGHVFHAINRLRRRRLHRTGLQVME 104
Query: 113 WMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKW 172
W++ + + LS+ DY+ ++ KV GI E F +P + Y L+
Sbjct: 105 WVIRERPYKLSELDYSYLLEFTAKVHGISEAESLFLRIPQEYRNELLYNNLVMACLELSL 164
Query: 173 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 232
+ + ++++ +L + +YN ++ L+ S G+ + + ++ ++K V P TYN+
Sbjct: 165 IKLSYGYMRKMRELSLPISPYVYNRLIILHSSEGRRKTIPKILAQMKASKVTPHTSTYNI 224
Query: 233 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 292
+ A NID V + ++M ++ + ++ + + V S T +EA K
Sbjct: 225 LLKIQANEHNIDGVARVFNDMKRAKVEPNEITYGILAISHAVARLYTV---SQTYIEAIK 281
Query: 293 -SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLK 351
S+T W T + L+ILY LG + ++ WK +++ + S+++ + ++ +G ++
Sbjct: 282 NSMTGTNWSTQEILLILYGYLGKEKELKMTWKLMQVLPH-IRSKSFTLAIEAFGKIGSIE 340
Query: 352 EV----GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
+ GEI K T F N +L + G+ +KA+ + C P
Sbjct: 341 QAEEIWGEIKSARKLRLTEQF-----NSMLSVYCRHGVVDKASAVFKEMRASGCQP 391
>gi|302801578|ref|XP_002982545.1| hypothetical protein SELMODRAFT_421999 [Selaginella moellendorffii]
gi|300149644|gb|EFJ16298.1| hypothetical protein SELMODRAFT_421999 [Selaginella moellendorffii]
Length = 1138
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 140/292 (47%), Gaps = 13/292 (4%)
Query: 106 HALEISEWMV--THKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTAL 163
HALEI++WM + F L+ D R+DL ++ + ER FE L ++ Y AL
Sbjct: 713 HALEIADWMALSRPRPFTLTTKDNIFRMDLASRCGSVGKAERIFERLAPEHRSEVAYNAL 772
Query: 164 LHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNV 223
L Y K +AE LF+ +K + + N + ++Y +G +V ++ +E ++ V
Sbjct: 773 LLSYTKKKKRGRAERLFKELKATGTISSCYSLNLLASMYRQLGLDAEVLMLAKEAQKLGV 832
Query: 224 VPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAE 283
D+ YNL + + +++V+K ++ + + + + NIY++A N +
Sbjct: 833 ELDMCFYNLLLPAKFRVQGLEEVEKLYATITSPRDRT-RFFTCLAMANIYVSAGR--NDK 889
Query: 284 SSTLVE-----AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
++E E +Q Y+ LI +YA L + ++++ W+ L+ +Q T +Y
Sbjct: 890 VLEMLELIDQGMEAGTIVKQRRRYNVLISMYASLEDGARVERTWERLKQQRQPNTE-DYC 948
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC-NRLLGAFSDVGLTEKA 389
CI+ ++ LGH+ E I Q ++ S N ++ +S G+ E+A
Sbjct: 949 CIIRAWGKLGHVVR-AETIFQVAEANEKSLKYSTVFNAMMFVYSVAGMREEA 999
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 157/329 (47%), Gaps = 22/329 (6%)
Query: 75 VIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLM 134
+++ W EGN LR I+ +LRK +R ALE+++WM K+F D R+D+
Sbjct: 97 MLKEWEEEGNVLDKEMLRAIMLKLRKWKRGSLALEVADWMYYTKQFPQDLDDVILRMDMA 156
Query: 135 TKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALM 194
+ I ++ F+ L KT++ Y + +++ K A++ + + K++ L N +
Sbjct: 157 VRAKKIRRAQKIFKKLQAWEKTTDAYNTMFLIFSQRKMILHADDFYYKFKEAKLKPNDIT 216
Query: 195 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 254
++ + LY G KV + E+I+ + P + N + S I ++ +++
Sbjct: 217 FSILACLYRRCGLHNKVVRLQEDIEAAGMKPCVCFLNNLMVSKYELHGISSAEEIFNQLV 276
Query: 255 CDSGGSDDWVKYVNLVNIYITASHLVNA----ESSTLVEA-EKSITQRQWI----TYDFL 305
GSD +K +L + A+ ++A ++ L+E EK++ Q + TY L
Sbjct: 277 --PAGSD--LKRSHLSTYSMMAASYLSAGMHDKAQNLLEVIEKAMDQGSFPKLRRTYHIL 332
Query: 306 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 365
I +Y+ + N+D ++++WK + + + +++Y+ ++ S G EVG +K++
Sbjct: 333 ISMYSTMKNRDGMERVWKKI----EDLKAQDYVAMIES---CGRADEVGSAEKYFKEADR 385
Query: 366 SDF--DISACNRLLGAFSDVGLTEKANEF 392
S LLG ++ G +KA +
Sbjct: 386 KGLLNQPSLFAALLGVYAGKGQADKAEKL 414
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 73/144 (50%), Gaps = 6/144 (4%)
Query: 75 VIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLM 134
VI++ + +G+ + HIL + + + + +E V K L DY I+
Sbjct: 312 VIEKAMDQGSFPKLRRTYHILISMYSTMKNRDGME----RVWKKIEDLKAQDYVAMIESC 367
Query: 135 TKVFGIHSGERYFEGLPLSAKTSET--YTALLHLYAGAKWTEKAEELFERVKQSNLSFNA 192
+ + S E+YF+ ++ + ALL +YAG +KAE+LF+++K+ ++S +A
Sbjct: 368 GRADEVGSAEKYFKEADRKGLLNQPSLFAALLGVYAGKGQADKAEKLFKKMKEQDVSRDA 427
Query: 193 LMYNEMMTLYMSVGQVEKVALVVE 216
L Y+ ++ ++ +++ ++E
Sbjct: 428 LCYHYIILANLNAKNIDRAVEILE 451
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 103/221 (46%), Gaps = 28/221 (12%)
Query: 176 AEELFERV-------KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR---KNVVP 225
AEE+F ++ K+S+LS Y+ M Y+S G +K ++E I++ + P
Sbjct: 268 AEEIFNQLVPAGSDLKRSHLS----TYSMMAASYLSAGMHDKAQNLLEVIEKAMDQGSFP 323
Query: 226 DIF-TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES 284
+ TY++ IS + N D +++ ++ D D YV ++ A + +AE
Sbjct: 324 KLRRTYHILISMYSTMKNRDGMERVWKKIE-DLKAQD----YVAMIESCGRADEVGSAEK 378
Query: 285 STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY 344
EA++ Q + L+ +YAG G DK ++++K + K++ SR+ +C Y
Sbjct: 379 -YFKEADRKGLLNQPSLFAALLGVYAGKGQADKAEKLFKKM---KEQDVSRDALCY--HY 432
Query: 345 LMLGHL--KEVGEIIDQWKQSATSDFDISACNRLLGAFSDV 383
++L +L K + ++ + + + LG F DV
Sbjct: 433 IILANLNAKNIDRAVEILELAEAAGMRDGRSRPFLGTFCDV 473
>gi|449523950|ref|XP_004168986.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 191
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 93/199 (46%), Gaps = 36/199 (18%)
Query: 55 KDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWM 114
KD L RI + P S T ++ +WV E ELRHI+KELR +R+KHALE+
Sbjct: 28 KDSLYRRISPVGDPNISVTPLLDQWVLESGLVQQDELRHIIKELRVYKRFKHALEV---- 83
Query: 115 VTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE 174
E YF +P K + + ALL+ YA K+ +
Sbjct: 84 -----------------------------EDYFNNMPSQLKRCQVHIALLNCYAHEKYAD 114
Query: 175 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 234
KA + +++K+ + +L YN M LY +G+ E++ +K +V D FTY +
Sbjct: 115 KANAVLQKIKEMGFAKTSLPYNITMNLYHQIGEFERLD---SPLKETDVDHDQFTYTTRL 171
Query: 235 SSCAATLNIDQVKKFLDEM 253
S+ A + ++K +++M
Sbjct: 172 SAYATAFDFTGIEKIMEQM 190
>gi|302798621|ref|XP_002981070.1| hypothetical protein SELMODRAFT_444770 [Selaginella moellendorffii]
gi|300151124|gb|EFJ17771.1| hypothetical protein SELMODRAFT_444770 [Selaginella moellendorffii]
Length = 1138
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 157/329 (47%), Gaps = 22/329 (6%)
Query: 75 VIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLM 134
+++ W EGN LR I+ +LRK +R ALE+++WM K+F D R+D+
Sbjct: 97 MLKEWEEEGNVLDKEMLRAIMLKLRKWKRGSLALEVADWMYYTKQFPQDLDDVILRMDMA 156
Query: 135 TKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALM 194
+ I ++ F+ L KT++ Y + +++ K A++ + + K++ L N +
Sbjct: 157 VRAKKIRRAQKIFKKLQAWEKTTDAYNTMFLIFSQRKMILHADDFYYKFKEAKLKPNDIT 216
Query: 195 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 254
++ + LY G KV + E+I+ + P + N + S I ++ +++
Sbjct: 217 FSILACLYRRCGLHNKVVRLQEDIEAAGMKPCVCFLNNLMVSKYELHGISSAEEIFNQLV 276
Query: 255 CDSGGSDDWVKYVNLVNIYITASHLVNA----ESSTLVEA-EKSITQRQWI----TYDFL 305
GSD +K +L + A+ ++A ++ L+E EK++ Q + TY L
Sbjct: 277 --PAGSD--LKRSHLSTYSMMAASYLSAGMHDKAQNLLEVIEKAMDQGSFPKLRRTYHIL 332
Query: 306 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 365
I +Y+ + N+D ++++WK + + + +++Y+ ++ S G EVG +K++
Sbjct: 333 ISMYSTMKNRDGMERVWKKI----EDLKAQDYVAMIES---CGRADEVGSAEKYFKEADR 385
Query: 366 SDF--DISACNRLLGAFSDVGLTEKANEF 392
S LLG ++ G +KA +
Sbjct: 386 KGLLNQPSLFAALLGVYAGKGQADKAEKL 414
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 138/292 (47%), Gaps = 13/292 (4%)
Query: 106 HALEISEWMV--THKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTAL 163
HALEI++WM + F L+ D R+DL ++ + ER FE L ++ Y AL
Sbjct: 713 HALEIADWMALSRPRPFTLTTKDNIFRMDLASRCGSVGKAERIFERLAPEHRSEVAYNAL 772
Query: 164 LHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNV 223
L Y K +AE LF+ +K + + N + ++Y + +V ++ +E ++ V
Sbjct: 773 LLSYTKKKKRGRAERLFKELKATGTISSCYSLNLLASMYRQLRLDAEVLMLAKEAQKLGV 832
Query: 224 VPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAE 283
D+ YNL + + ++ V+K ++ + + + + NIY++A N +
Sbjct: 833 ELDMCFYNLLLPAKFRVQGLEDVEKLYATITSPRDRT-RFFTCLAMANIYVSAGR--NDK 889
Query: 284 SSTLVE-----AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
++E E +Q Y+ LI +YA L + ++++ W+ L+ +Q T +Y
Sbjct: 890 VLEMLELIDQGMEAGTIVKQRRRYNVLISMYASLEDGARVERTWERLKQQRQPNTE-DYC 948
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC-NRLLGAFSDVGLTEKA 389
CI+ ++ LGH+ E I Q ++ S N ++ +S G+ E+A
Sbjct: 949 CIIRAWGKLGHVVR-AETIFQVAEANEKSLKYSTVFNAMMFVYSVAGMREEA 999
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 73/144 (50%), Gaps = 6/144 (4%)
Query: 75 VIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLM 134
VI++ + +G+ + HIL + + + + +E V K L DY I+
Sbjct: 312 VIEKAMDQGSFPKLRRTYHILISMYSTMKNRDGME----RVWKKIEDLKAQDYVAMIESC 367
Query: 135 TKVFGIHSGERYFEGLPLSAKTSET--YTALLHLYAGAKWTEKAEELFERVKQSNLSFNA 192
+ + S E+YF+ ++ + ALL +YAG +KAE+LF+++K+ ++S +A
Sbjct: 368 GRADEVGSAEKYFKEADRKGLLNQPSLFAALLGVYAGKGQADKAEKLFKKMKEQDVSRDA 427
Query: 193 LMYNEMMTLYMSVGQVEKVALVVE 216
L Y+ ++ ++ +++ ++E
Sbjct: 428 LCYHYIILANLNARNIDRAVEILE 451
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 103/221 (46%), Gaps = 28/221 (12%)
Query: 176 AEELFERV-------KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR---KNVVP 225
AEE+F ++ K+S+LS Y+ M Y+S G +K ++E I++ + P
Sbjct: 268 AEEIFNQLVPAGSDLKRSHLS----TYSMMAASYLSAGMHDKAQNLLEVIEKAMDQGSFP 323
Query: 226 DIF-TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES 284
+ TY++ IS + N D +++ ++ D D YV ++ A + +AE
Sbjct: 324 KLRRTYHILISMYSTMKNRDGMERVWKKIE-DLKAQD----YVAMIESCGRADEVGSAEK 378
Query: 285 STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY 344
EA++ Q + L+ +YAG G DK ++++K + K++ SR+ +C Y
Sbjct: 379 -YFKEADRKGLLNQPSLFAALLGVYAGKGQADKAEKLFKKM---KEQDVSRDALCY--HY 432
Query: 345 LMLGHL--KEVGEIIDQWKQSATSDFDISACNRLLGAFSDV 383
++L +L + + ++ + + + LG F DV
Sbjct: 433 IILANLNARNIDRAVEILELAEAAGMRDGRSRPFLGTFCDV 473
>gi|242043362|ref|XP_002459552.1| hypothetical protein SORBIDRAFT_02g006520 [Sorghum bicolor]
gi|241922929|gb|EER96073.1| hypothetical protein SORBIDRAFT_02g006520 [Sorghum bicolor]
Length = 421
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 142/304 (46%), Gaps = 21/304 (6%)
Query: 95 LKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA 154
L LRK + Y AL+ EW+ K + DYA+ +DL+ + GI + E+Y E +P +
Sbjct: 3 LFHLRKQRMYNKALKFMEWIDRRKLLNFEERDYASHLDLVARNHGIEAAEKYIERVPEAF 62
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
++ Y LL +KAE++F +++ +L N+M+ LY V + KV +
Sbjct: 63 RSEVLYETLLVNCVCRDDAQKAEQVFNEIRELSLPLTVSACNQMLLLYKRVSR-NKVVDI 121
Query: 215 VEEIKRKNVVPDIFTYNLWI---SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
++ ++ +N+ P +FTY L I TL ++ V + E +G D+ +
Sbjct: 122 LKLMENENIKPSLFTYKLMIDLKGRSNDTLGMESVLNLMKE----NGFEPDFGIQTMVAK 177
Query: 272 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 331
YI+ AE T R I L+ LYA LG D +++IW T+ K
Sbjct: 178 FYISGDLAEKAEEVTNAMEVYVNANRHAIRS--LLDLYAILGRPDDVERIWNLC--TEPK 233
Query: 332 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA---TSDFDISACNRLLGAFSDVGLTEK 388
+ +++ + ++ LGH++ E D +++ TS + N +L +++ L +K
Sbjct: 234 L--EDFLAAIKAWGKLGHIERAEETFDALVKTSPKLTSKY----FNAMLYVYAENELLDK 287
Query: 389 ANEF 392
+F
Sbjct: 288 GKKF 291
>gi|302782563|ref|XP_002973055.1| hypothetical protein SELMODRAFT_413483 [Selaginella moellendorffii]
gi|300159656|gb|EFJ26276.1| hypothetical protein SELMODRAFT_413483 [Selaginella moellendorffii]
Length = 547
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 161/347 (46%), Gaps = 21/347 (6%)
Query: 39 SSQNECLDEETSNSDGKDDLKSRIFRISLPK-RSATNVIQRWVSEGNQATVSELRHILKE 97
+ +N C T + +L RI R+ + +++ W++EGN+ T L + +
Sbjct: 43 TRKNPC--GVTPETVAHAELARRISRLKWCQDHMVVPIVEEWMAEGNEITRYGLIIVRHK 100
Query: 98 LRKSQRYKHALEISEWMVTHKEFVLSDSDYA-TRIDLMTKVFGIHSGERYFEGLPLSAKT 156
LR+ +R+ HAL IS+W+ K + D A IDL+++V + F+ LP K+
Sbjct: 101 LRRRKRFHHALRISDWIAYKKRVIPYDHKEALNHIDLVSRV-SVTRAREMFDNLPADWKS 159
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNL-SFNALMYNEMMTLYMSVGQVEKVALVV 215
E YT LL +Y AE ++ +K+ L S + + N M+TLY KVA ++
Sbjct: 160 REAYTVLLSMYVRHSMAADAESIYTTLKRWGLRSISPI--NMMLTLYQKHQVFWKVAELI 217
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275
+ + ++ ++N+ + + +++ ++ M +S D Y L + Y
Sbjct: 218 RDAEEAGQSLNMCSFNILLPMTFRAGGVAEMESLVEMM--ESKNFLDEHTYCMLASSYGR 275
Query: 276 ASHLVNAESSTLVEAEKSIT---QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 332
A + A+ +V + T R TY+ +I++Y +G+ + + +IW ++
Sbjct: 276 AGMVDKAKEMLMVVEDGMETGKFNRLRRTYNVIIVIYGFIGDVEGVKRIWDI--TSRMDP 333
Query: 333 TSRNYICILSSYLMLG--HLKEVGEIIDQWKQSATSDFDISACNRLL 377
T+ +YIC++ S +G L E G + +A I+ CN +L
Sbjct: 334 TAEDYICMIRSSAKVGLFELAESGFL----ALAAQRKMHITVCNVML 376
>gi|449474117|ref|XP_004154078.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like, partial [Cucumis sativus]
Length = 263
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 107/213 (50%), Gaps = 3/213 (1%)
Query: 111 SEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGA 170
SEW+ + + ++ DYA+R+ L+ KV G+H E Y +P S + + ALL Y A
Sbjct: 53 SEWLEANGQLEFNERDYASRVHLIAKVQGLHKAESYIAKIPKSFQGEVVHRALLANYVVA 112
Query: 171 KWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 230
EKAEE+F ++K + YN+M+ LY + + K+A V+ ++++N+ P FTY
Sbjct: 113 NNVEKAEEVFNKIKDLEFPMSIFAYNQMLVLYKKIDR-RKIADVLLLMEKENIKPCPFTY 171
Query: 231 NLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 290
+ I + +I +++ +D M + G D L Y++ V A++
Sbjct: 172 KILIDGKGLSNDISGMEQVVDSMKAE-GIELDVSTLSLLAKHYVSCGLKVKAKAILKEIE 230
Query: 291 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 323
E + QW+ L+ Y L +D++ ++W+
Sbjct: 231 ETNSNGPQWLC-RILLPFYGKLQMEDEVRRLWE 262
>gi|302798915|ref|XP_002981217.1| hypothetical protein SELMODRAFT_420704 [Selaginella moellendorffii]
gi|300151271|gb|EFJ17918.1| hypothetical protein SELMODRAFT_420704 [Selaginella moellendorffii]
Length = 541
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 137/321 (42%), Gaps = 41/321 (12%)
Query: 70 RSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYAT 129
R ++ W SEGN T + ++ L Y +++ W++ K F L+D D+
Sbjct: 123 RDIVAALKDWQSEGNLVTRDVIYKLIIRLHARMFYFQGMKLMNWVIVEKPFQLTDFDHLV 182
Query: 130 RIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLS 189
R+D T+ + F + KT Y LL +A A E+A ++ +++K+ L
Sbjct: 183 RMDFHTRELKVDKVLTCFNR--IQDKTETCYVLLLQAFATAHRKERALDVLKQMKELVLI 240
Query: 190 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRK-NVVPDIFTYNLWISSCAATLNIDQVKK 248
N+ YN ++ +Y+ +G +++ + E+K K NV PD FTY LN+ +
Sbjct: 241 TNSYSYNLVIAMYLRMGLIDEAKEMFAELKDKSNVAPDAFTY----------LNLLK--- 287
Query: 249 FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIIL 308
S D+ G DD L + ++ +K T +W LI L
Sbjct: 288 -----SRDALGMDD----------------LEDTIEEFFLDVDKIPTGFEWRN---LIRL 323
Query: 309 YAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDF 368
Y +G K ++++W+ + + M ++ + S+ M G +K+ EI Q ++
Sbjct: 324 YGAMGKKKDVERLWREQKRVAEYMPESYFLAAIESFGMNGEMKQFEEICKQL-EAQNQKL 382
Query: 369 DISACNRLLGAFSDVGLTEKA 389
C +L + GL A
Sbjct: 383 SERQCFTMLKVYCMNGLMNDA 403
>gi|302801862|ref|XP_002982687.1| hypothetical protein SELMODRAFT_422000 [Selaginella moellendorffii]
gi|300149786|gb|EFJ16440.1| hypothetical protein SELMODRAFT_422000 [Selaginella moellendorffii]
Length = 541
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 136/321 (42%), Gaps = 41/321 (12%)
Query: 70 RSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYAT 129
R ++ W SEGN T + ++ L Y +++ W++ K F L+D D+
Sbjct: 123 RDIVAALKDWQSEGNLVTRDVIYKLIIRLHARMFYFQGMKLMNWVIVEKPFQLTDFDHLV 182
Query: 130 RIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLS 189
R+D T+ + F + KT Y LL +A A E+A ++ +++K+ L
Sbjct: 183 RMDFHTRELKVDKVLTCFNR--IQDKTETCYVLLLQAFATAHRKERALDVLKQMKELVLI 240
Query: 190 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRK-NVVPDIFTYNLWISSCAATLNIDQVKK 248
N YN ++ +Y+ +G +++ + E+K K NV PD FTY LN+ +
Sbjct: 241 TNPYSYNLVIAMYLRMGLIDEAKEMFAELKDKSNVAPDAFTY----------LNLLK--- 287
Query: 249 FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIIL 308
S D+ G DD L + ++ +K T +W LI L
Sbjct: 288 -----SRDALGMDD----------------LEDTIEEFFLDVDKIPTGFEWRN---LIRL 323
Query: 309 YAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDF 368
Y +G K ++++W+ + + M ++ + S+ M G +K+ EI Q ++
Sbjct: 324 YGAMGKKKDVERLWREQKRVAEYMPESYFLAAIESFGMNGEMKQFEEICKQL-EAQNQKL 382
Query: 369 DISACNRLLGAFSDVGLTEKA 389
C +L + GL A
Sbjct: 383 SERQCFTMLKVYCMNGLMNDA 403
>gi|413917311|gb|AFW57243.1| hypothetical protein ZEAMMB73_018964 [Zea mays]
Length = 514
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 172/382 (45%), Gaps = 28/382 (7%)
Query: 34 FLSSGS---SQNECLDEETSNSDGKD-DLKSRIFRISLPKRSATNVIQRWVSEGNQATVS 89
F SSGS + E + G++ L R+ R + S ++ W+++G
Sbjct: 23 FTSSGSNTTAPPPAGAEGLRDEPGEEGSLARRVERAA----SVGAAMRGWMADGRAVHRG 78
Query: 90 ELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEG 149
+ H + LR+ + ++ AL++ EW+V + + LS+ DY+ ++ KV GI E F
Sbjct: 79 HVFHAINRLRRHRLHRTALQVMEWIVRERPYKLSELDYSYLLEFTAKVHGISEAESLFLR 138
Query: 150 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 209
+P + Y L+ + + ++++ +L + +YN ++ L+ S G+ +
Sbjct: 139 VPQECRKELLYNNLVMAALDLNHIKHSYAYMRKMRELSLPISPYVYNRLIILHSSPGRRK 198
Query: 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
++ ++ ++K VVP TYN+ + A NID + + + M ++ + Y L
Sbjct: 199 TISKILSQMKADRVVPHTSTYNILLKIQANEHNIDGLARVFNGMKRAKIEPNE-ITYGIL 257
Query: 270 VNIYITASHLVNAESSTLVEA-EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 328
+ A + T VEA E S+T W T + L+ILY LG + ++ + W+ ++
Sbjct: 258 AIAHAVAR--LYTVCHTYVEAIENSMTGTNWSTLEILLILYGYLGKEKELKRTWEIMQDL 315
Query: 329 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQW-------KQSATSDFDISACNRLLGAFS 381
+ S+++ + ++ +G + + +I W K S T F N +L +
Sbjct: 316 PH-IRSKSFTLAIEAFGKVGSIDQAEKI---WIHIKSTKKLSLTEQF-----NSMLSVYC 366
Query: 382 DVGLTEKANEFHMLLLQKNCAP 403
G+ +KA+ + C P
Sbjct: 367 RHGVVDKASSVFKEMRANGCQP 388
>gi|302805546|ref|XP_002984524.1| hypothetical protein SELMODRAFT_423640 [Selaginella moellendorffii]
gi|300147912|gb|EFJ14574.1| hypothetical protein SELMODRAFT_423640 [Selaginella moellendorffii]
Length = 547
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 160/347 (46%), Gaps = 21/347 (6%)
Query: 39 SSQNECLDEETSNSDGKDDLKSRIFRISLPK-RSATNVIQRWVSEGNQATVSELRHILKE 97
+ +N C T + +L RI R+ + +++ W++EGN+ T L + +
Sbjct: 43 TRKNPC--GVTPETVAHAELARRISRLKWCQDHLVVPIVEEWMAEGNEITRYGLIIVRHK 100
Query: 98 LRKSQRYKHALEISEWMVTHKEFVLSDSDYA-TRIDLMTKVFGIHSGERYFEGLPLSAKT 156
LR+ +R+ HAL IS+W+ K + D A IDL+++V + F+ LP K+
Sbjct: 101 LRRRKRFHHALRISDWIAYKKRVIPYDHKEALNHIDLVSRV-SVTRAREMFDNLPADWKS 159
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNL-SFNALMYNEMMTLYMSVGQVEKVALVV 215
E YT LL +Y AE ++ +K+ L S + + N M+TLY KVA ++
Sbjct: 160 REGYTVLLSMYVRHSMAADAESIYTTLKRWGLRSISPI--NMMLTLYQKHQVFWKVAELI 217
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275
+ + ++ ++N+ + + +++ ++ M +S D Y L + Y
Sbjct: 218 RDAEEAGQSLNMCSFNILLPMTFRAGGVAEMESLVEMM--ESKNFLDEHTYCMLASSYGR 275
Query: 276 ASHLVNAESSTLV---EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 332
A + A+ +V E R TY+ +I++Y +G+ + + +IW ++
Sbjct: 276 AGMVDKAKEMLMVVEDGMETGKFNRLRRTYNVIIVIYGFIGDVEGVKRIWDI--TSRMDP 333
Query: 333 TSRNYICILSSYLMLGHLK--EVGEIIDQWKQSATSDFDISACNRLL 377
T+ +YIC++ S +G + E G + +A I+ CN +L
Sbjct: 334 TAEDYICMIRSSAKVGLFEQAESGFL----ALAAQRKMHITVCNVML 376
>gi|186478941|ref|NP_174121.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332192779|gb|AEE30900.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 388
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 100/193 (51%), Gaps = 2/193 (1%)
Query: 60 SRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKE 119
SRI + ++ T + W+ G + LR ++ L +SQR+ HAL++SEW+
Sbjct: 37 SRIMALGREQKKVTPPLDEWLKRGKDLNPAVLRGLINSLCESQRFNHALQVSEWITKRGI 96
Query: 120 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE-KAEE 178
F LS D+A+R+ L+ G+ E++F+ +P + + +T LL LY +K T +AE
Sbjct: 97 FDLSTEDFASRLCLVEISTGLKEAEKFFKSIPENMRDDSVHTTLLSLYTISKKTRHEAEA 156
Query: 179 LFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI-FTYNLWISSC 237
++ ++ N+ Y M+ LY +G+ + ++ ++K V D T N + +
Sbjct: 157 TYQTMRVQNMLLKPYPYYSMIYLYALLGEKNMIDEILRQMKENGVEHDKNLTANNVLKAY 216
Query: 238 AATLNIDQVKKFL 250
A+ +++ ++ FL
Sbjct: 217 ASLPDVEAMEMFL 229
>gi|302798905|ref|XP_002981212.1| hypothetical protein SELMODRAFT_420695 [Selaginella moellendorffii]
gi|300151266|gb|EFJ17913.1| hypothetical protein SELMODRAFT_420695 [Selaginella moellendorffii]
Length = 414
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 141/321 (43%), Gaps = 50/321 (15%)
Query: 91 LRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGL 150
L +++ +LR + ++ A EI +WM+ +K F + +SD+ ++L+ ++ + ++E +
Sbjct: 6 LLNVIYKLRITAKFGQAREICDWMIRNKVFEIEESDHVLLLELVGRISKFQATRCFWE-M 64
Query: 151 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 210
P ++ + YTA+L ++A AE+ +K NL YN M+ +Y + +K
Sbjct: 65 PAELRSEDAYTAMLQVFARWHAIPAAEDTMSEMKSLNLITRVEPYNIMLDMYKRKNEDDK 124
Query: 211 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNID----QVKKFLDEMSCDSGGSDDWVKY 266
V + +E+ V PD TY + + + D +V+KFLDE
Sbjct: 125 VRAMYDELSSLGVAPDAHTYLIVLRAKQKIGGFDGIEAEVRKFLDE-------------- 170
Query: 267 VNLVNIYITASHLVNAESSTLVEAEKSITQRQWI-TYDFLIILYAGLGNKDKIDQIWKSL 325
+T RQ + Y+ ++ +Y L + I+ + L
Sbjct: 171 --------------------------QLTSRQPLFIYECMLRIYTLLRDLAAIENLRSIL 204
Query: 326 RMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGL 385
T +K +S +Y C+L SY LG ++ + ++ T +I + ++ ++ G
Sbjct: 205 LKTFKKFSSSSYNCLLDSYRQLGEVERAERLFNEIGNKFT--LNIQSYRAMIAVYASNGR 262
Query: 386 TEKANEFHMLLLQKN--CAPT 404
EKANE + L + C P
Sbjct: 263 MEKANELYKQLFRAGFECHPA 283
>gi|302784330|ref|XP_002973937.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
gi|300158269|gb|EFJ24892.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
Length = 823
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 146/321 (45%), Gaps = 7/321 (2%)
Query: 87 TVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERY 146
T SEL + +K L + ++K ALE+ EW+ H F L A+ + ++ + +
Sbjct: 140 TDSELVYFVKALGRQGKWKKALEVFEWIRKHDCFKLRGVATASILSVLGNHEQLPAALEL 199
Query: 147 FEGLPLSAKTS---ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM 203
FE L S YT+L+ + + A+ ++ LFE +++ NA+ YN M+ LY
Sbjct: 200 FESLKQDESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYG 259
Query: 204 SVGQV-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 262
G +++ + +E+K + PD +TYN I++C + + + EM ++G +
Sbjct: 260 KRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMK-EAGCCPN 318
Query: 263 WVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 322
V Y L+++Y A S LVE E + +TY+ LI YA G D+ +
Sbjct: 319 RVTYNALLDVYGKGGMHKEA-SELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALK 377
Query: 323 KSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSD 382
KSL Y ++S++ ++ E + +++ + +I N L+ +
Sbjct: 378 KSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTP-NIVTYNILIDIYGR 436
Query: 383 VGLTEKANEFHMLLLQKNCAP 403
+ + + + +KNC P
Sbjct: 437 MEKLDDMMKVFKFMQEKNCTP 457
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 102/249 (40%), Gaps = 44/249 (17%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY ALL +Y ++A EL ++ + +S N + YNE++ Y G ++ A + + +
Sbjct: 321 TYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSL 380
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K + PD FTY IS A ++ +K L+
Sbjct: 381 LSKGLCPDEFTYCTLIS---AFNRAERYEKALE--------------------------- 410
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
T E K+ +TY+ LI +Y G +K+D + K + ++K + + +
Sbjct: 411 -------TFTEMRKTNCTPNIVTYNILIDIY---GRMEKLDDMMKVFKFMQEKNCTPDLV 460
Query: 339 C---ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 395
+L S+ G L EV + + K++ + N L+ + G + + + +
Sbjct: 461 TWNSLLKSFGNCGMLTEVSNVFREMKRAGYMP-GVDTFNILIECYGRCGYVDYSVDIYKG 519
Query: 396 LLQKNCAPT 404
LL+ PT
Sbjct: 520 LLRTGLQPT 528
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 49/96 (51%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
+ + A++ + A W E+A +L E ++++ L + + YN +M++Y G K V+ E
Sbjct: 636 KVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYYKAEEVMSE 695
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
++R P++ TYN + S +D + +M
Sbjct: 696 MRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDM 731
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 6/224 (2%)
Query: 149 GLPLSAKTSETYTALLHLYA-GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 207
GL LS + L+H YA ++ + + + E K + + ++ + Y G
Sbjct: 559 GLQLS---DACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCGM 615
Query: 208 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 267
+ L + ++ PDI +N IS CA I++ K L+E+ + D V Y
Sbjct: 616 DNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIR-KAQLKPDGVTYN 674
Query: 268 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 327
L+++Y AE + E ++ ITY+ L+ Y G D +++ +
Sbjct: 675 CLMSMYGREGMYYKAE-EVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVA 733
Query: 328 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDIS 371
+ + + + ++ SY LG KE +I+ + I+
Sbjct: 734 ARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQIT 777
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/253 (18%), Positives = 109/253 (43%), Gaps = 6/253 (2%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
T T+ AL+ A ++ E++ + + ++ L + + ++ Y + GQ ++
Sbjct: 527 PTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKY 586
Query: 215 VEEIKR--KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 272
++E+++ K + I ++ C ++ ++ + L+++ D+G S D +K N +
Sbjct: 587 IDELEKSAKQPLSGILCKTFVLAYCKCGMD-NEAQLALNQLY-DNGHSPD-IKVFNAMIS 643
Query: 273 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 332
+ L E K+ + +TY+ L+ +Y G K +++ +R +
Sbjct: 644 MCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYYKAEEVMSEMRRAGKAP 703
Query: 333 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
Y +L SY G + + + +A D N L+G++S +GL ++A
Sbjct: 704 NLITYNTLLYSYTKHGRMDDAARVFGDM-VAARVRPDNFTFNTLVGSYSSLGLYKEALSV 762
Query: 393 HMLLLQKNCAPTN 405
+ + C PT
Sbjct: 763 IEYMTEHGCQPTQ 775
>gi|302771417|ref|XP_002969127.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
gi|300163632|gb|EFJ30243.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
Length = 646
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 146/321 (45%), Gaps = 7/321 (2%)
Query: 87 TVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERY 146
T SEL + +K L + ++K ALE+ EW+ H F L A+ + ++ + +
Sbjct: 1 TDSELVYFVKALGRQGKWKKALEVFEWIRKHDCFKLRGVATASILSVLGNHEQLPAALEL 60
Query: 147 FEGLPLSAKTS---ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM 203
FE L S YT+L+ + + A+ ++ LFE +++ NA+ YN M+ LY
Sbjct: 61 FESLKQDESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYG 120
Query: 204 SVGQV-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 262
G +++ + +E+K + PD +TYN I++C + + + EM ++G +
Sbjct: 121 KRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMK-EAGCCPN 179
Query: 263 WVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 322
V Y L+++Y A S LVE E + +TY+ LI YA G D+ +
Sbjct: 180 RVTYNALLDVYGKGGMHKEA-SELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALK 238
Query: 323 KSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSD 382
KSL Y ++S++ ++ E + +++ + +I N L+ +
Sbjct: 239 KSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTP-NIVTYNILIDIYGR 297
Query: 383 VGLTEKANEFHMLLLQKNCAP 403
+ + + + +KNC P
Sbjct: 298 MEKLDDMMKVFKFMQEKNCTP 318
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 102/249 (40%), Gaps = 44/249 (17%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY ALL +Y ++A EL ++ + +S N + YNE++ Y G ++ A + + +
Sbjct: 182 TYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSL 241
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K + PD FTY IS A ++ +K L+
Sbjct: 242 LSKGLCPDEFTYCTLIS---AFNRAERYEKALE--------------------------- 271
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
T E K+ +TY+ LI +Y G +K+D + K + ++K + + +
Sbjct: 272 -------TFTEMRKTNCTPNIVTYNILIDIY---GRMEKLDDMMKVFKFMQEKNCTPDLV 321
Query: 339 C---ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 395
+L S+ G L EV + + K++ + N L+ + G + + + +
Sbjct: 322 TWNSLLKSFGNCGMLTEVSNVFREMKRAGYMP-GVDTFNILIECYGRCGYVDYSVDIYKG 380
Query: 396 LLQKNCAPT 404
LL+ PT
Sbjct: 381 LLRTGLQPT 389
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 49/96 (51%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
+ + A++ + A W E+A +L E ++++ L + + YN +M++Y G K V+ E
Sbjct: 497 KVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYHKAEEVMSE 556
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
++R P++ TYN + S +D + +M
Sbjct: 557 MRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDM 592
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 48/251 (19%), Positives = 109/251 (43%), Gaps = 6/251 (2%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
T T+ AL+ A ++ E++ + + ++ L + + ++ Y + GQ ++ +
Sbjct: 389 TVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYI 448
Query: 216 EEIKR--KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
+E+++ K + I ++ C ++ ++ + L+++ D+G S D +K N +
Sbjct: 449 DELEKSAKQPLSGILCKTFVLAYCKCCMD-NEAQLALNQLY-DNGHSPD-IKVFNAMISM 505
Query: 274 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
+ L E K+ + +TY+ L+ +Y G K +++ +R +
Sbjct: 506 CAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYHKAEEVMSEMRRAGKAPN 565
Query: 334 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 393
Y +L SY G + + + +A D N L+G++S +GL ++A
Sbjct: 566 LITYNTLLYSYTKHGRMDDAARVFGDMV-AARVRPDNFTFNTLVGSYSSLGLYKEALSVI 624
Query: 394 MLLLQKNCAPT 404
+ + C PT
Sbjct: 625 EYMTEHGCQPT 635
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 92/224 (41%), Gaps = 6/224 (2%)
Query: 149 GLPLSAKTSETYTALLHLYAGA-KWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 207
GL LS + L+H YA + ++ + + + E K + + ++ + Y
Sbjct: 420 GLQLS---DACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCCM 476
Query: 208 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 267
+ L + ++ PDI +N IS CA I++ K L+E+ + D V Y
Sbjct: 477 DNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIR-KAQLKPDGVTYN 535
Query: 268 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 327
L+++Y AE + E ++ ITY+ L+ Y G D +++ +
Sbjct: 536 CLMSMYGREGMYHKAE-EVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVA 594
Query: 328 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDIS 371
+ + + + ++ SY LG KE +I+ + I+
Sbjct: 595 ARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQIT 638
>gi|125602283|gb|EAZ41608.1| hypothetical protein OsJ_26140 [Oryza sativa Japonica Group]
Length = 524
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 150/334 (44%), Gaps = 6/334 (1%)
Query: 71 SATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATR 130
S I+ W+ +G + H + LR+ + ++ AL++ EW++ + + LS+ DY+
Sbjct: 63 SVCAAIRGWMGDGRAVHRGHVFHAVNRLRRRRLHRAALQVMEWIMRERPYKLSELDYSYL 122
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSF 190
++ KV GI E F +P + Y L+ + A ++++ +L
Sbjct: 123 LEFTAKVHGISEAESLFLRIPQEYQNELLYNNLVMACLDLGLIKLAYGYKRKMRELSLPI 182
Query: 191 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 250
+ +YN ++ L+ S G+ + ++ ++ ++K V P TYN+ + A NID V +
Sbjct: 183 SPYVYNRLIILHSSPGRQKTISKILAQMKGDRVTPHTSTYNILLKIKANEHNIDGVARVF 242
Query: 251 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA-EKSITQRQWITYDFLIILY 309
++M + + + Y L + A + S T VEA E S+T W T + L+ILY
Sbjct: 243 NDMK-RAKVEPNEITYGILAIAHAVAR--LYTVSHTYVEAIENSMTGTNWSTLEILLILY 299
Query: 310 AGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD 369
G ++ W L + +++I + ++ +G + + EI +++ +
Sbjct: 300 GYHGKAKELKMTW-DLMQGLPHIRPKSFILAIEAFGKVGSIDQAEEIWGKFESTRKPKLT 358
Query: 370 ISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
N +L + GL +KA+ + C P
Sbjct: 359 -EQFNSILSVYCRHGLVDKASAVFKEMRANGCQP 391
>gi|302801852|ref|XP_002982682.1| hypothetical protein SELMODRAFT_421991 [Selaginella moellendorffii]
gi|300149781|gb|EFJ16435.1| hypothetical protein SELMODRAFT_421991 [Selaginella moellendorffii]
Length = 414
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 140/321 (43%), Gaps = 50/321 (15%)
Query: 91 LRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGL 150
L +++ +LR + ++ A EI +WM+ +K F + +SD+ ++L+ ++ + ++E +
Sbjct: 6 LLNVIYKLRITAKFGQAREICDWMIRNKVFEIEESDHVLLLELVGRISKFQATRCFWE-M 64
Query: 151 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 210
P ++ YTA+L ++A AE+ +K NL YN M+ +Y + +K
Sbjct: 65 PAELRSEAAYTAMLQVFARWHAIPAAEDTMSEMKSLNLITRVEPYNIMLDMYKRKNEDDK 124
Query: 211 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNID----QVKKFLDEMSCDSGGSDDWVKY 266
V + +E+ V PD TY + + + D +V+KFLDE
Sbjct: 125 VRAMYDELSSLGVAPDAHTYLIVLRAKQKIGGFDGIEAEVRKFLDE-------------- 170
Query: 267 VNLVNIYITASHLVNAESSTLVEAEKSITQRQWI-TYDFLIILYAGLGNKDKIDQIWKSL 325
+T RQ + Y+ ++ +Y L + I+ + L
Sbjct: 171 --------------------------QLTSRQPLFIYECMLRIYTLLRDLTAIENLRSIL 204
Query: 326 RMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGL 385
T +K +S +Y C+L +Y LG ++ + ++ T +I + ++ ++ G
Sbjct: 205 LKTFKKFSSSSYNCLLDAYRQLGEVERAERLFNEIGNKFT--LNIQSYRAMIAVYASNGR 262
Query: 386 TEKANEFHMLLLQKN--CAPT 404
EKANE + L + C P
Sbjct: 263 MEKANELYKQLFRAGFECHPA 283
>gi|242078281|ref|XP_002443909.1| hypothetical protein SORBIDRAFT_07g004200 [Sorghum bicolor]
gi|241940259|gb|EES13404.1| hypothetical protein SORBIDRAFT_07g004200 [Sorghum bicolor]
Length = 521
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 154/338 (45%), Gaps = 14/338 (4%)
Query: 71 SATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATR 130
S ++ W+++G + H + LR+ + ++ AL++ EW+V + + LS+ DY+
Sbjct: 67 SVGAAMRGWMADGRAVHRGHVFHAINRLRRHRLHRTALQVMEWIVRERPYKLSELDYSYL 126
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSF 190
++ KV GI E F +P + Y L+ + + ++++ +L
Sbjct: 127 LEFTAKVHGISEAESLFLRVPQEYQKELLYNNLVMAALDLDLIKHSYAYMRKMRELSLPI 186
Query: 191 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 250
+ +YN ++ L+ S + + ++ ++ ++K V P TYN+ + A NID + +
Sbjct: 187 SPYVYNRLIILHSSPSRRKTISKILYQMKADRVTPHTSTYNILLKIQANEHNIDGLARVF 246
Query: 251 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA-EKSITQRQWITYDFLIILY 309
+M ++ + ++ + + V T VEA E S+T W T + L+ILY
Sbjct: 247 SDMKRAKIEPNEITYGILAISHAVARLYTV---CHTYVEAIENSMTGTNWSTLEILLILY 303
Query: 310 AGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ----SAT 365
LG + ++ + W+ ++ + S+++ + ++ +G + + +I Q K S T
Sbjct: 304 GYLGKEKELKRTWEIMQDLPH-VRSKSFTVAIEAFGKVGSIDQAEKIWVQIKSTKKLSLT 362
Query: 366 SDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
F N +L + G+ +KA+ + C P
Sbjct: 363 EQF-----NSILSVYCRHGVVDKASSVFKEMRANGCQP 395
>gi|12322983|gb|AAG51473.1|AC069471_4 hypothetical protein [Arabidopsis thaliana]
Length = 349
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 96/184 (52%), Gaps = 2/184 (1%)
Query: 69 KRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYA 128
++ T + W+ G + LR ++ L +SQR+ HAL++SEW+ F LS D+A
Sbjct: 7 QKKVTPPLDEWLKRGKDLNPAVLRGLINSLCESQRFNHALQVSEWITKRGIFDLSTEDFA 66
Query: 129 TRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE-KAEELFERVKQSN 187
+R+ L+ G+ E++F+ +P + + +T LL LY +K T +AE ++ ++ N
Sbjct: 67 SRLCLVEISTGLKEAEKFFKSIPENMRDDSVHTTLLSLYTISKKTRHEAEATYQTMRVQN 126
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI-FTYNLWISSCAATLNIDQV 246
+ Y M+ LY +G+ + ++ ++K V D T N + + A+ +++ +
Sbjct: 127 MLLKPYPYYSMIYLYALLGEKNMIDEILRQMKENGVEHDKNLTANNVLKAYASLPDVEAM 186
Query: 247 KKFL 250
+ FL
Sbjct: 187 EMFL 190
>gi|218200516|gb|EEC82943.1| hypothetical protein OsI_27919 [Oryza sativa Indica Group]
Length = 500
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 147/321 (45%), Gaps = 6/321 (1%)
Query: 71 SATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATR 130
S I+ W+ +G + H + LR+ + ++ AL++ EW++ + + LS+ DY+
Sbjct: 64 SVCAAIRGWMGDGRAVHRGHVFHAVNRLRRRRLHRAALQVMEWIMRERPYKLSELDYSYL 123
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSF 190
++ KV GI E F +P + Y L+ + A ++++ +L
Sbjct: 124 LEFTAKVHGISEAESLFLRIPQEYQNELLYNNLVMACLDLGLIKLAYGYKRKMRELSLPI 183
Query: 191 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 250
+ +YN ++ L+ S G+ + ++ ++ ++K V P TYN+ + A NID V +
Sbjct: 184 SPYVYNRLIILHSSPGRQKTISKILAQMKGDRVTPHTSTYNILLKIKANEHNIDGVARVF 243
Query: 251 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA-EKSITQRQWITYDFLIILY 309
++M ++ + Y L + A + S T VEA E S+T W T + L+ILY
Sbjct: 244 NDMKRAKVEPNE-ITYGILAIAHAVAR--LYTVSHTYVEAIENSMTGTNWSTLEILLILY 300
Query: 310 AGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD 369
G ++ W L + +++I + ++ +G + + EI +++ +
Sbjct: 301 GYHGKAKELKMTW-DLMQGLPHIRPKSFILAIEAFGKVGSIDQAEEIWGKFESTRKPKLT 359
Query: 370 ISACNRLLGAFSDVGLTEKAN 390
N +L + GL +KA+
Sbjct: 360 -EQFNSILSVYCRHGLVDKAS 379
>gi|297847016|ref|XP_002891389.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337231|gb|EFH67648.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 371
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 126/266 (47%), Gaps = 21/266 (7%)
Query: 76 IQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMT 135
++RW G+Q S +R ++++ R ++++ ALE SEWM + F + DYA R++L+
Sbjct: 71 LERWRELGDQVKPSYVRGLVEDFRSTEQFSKALEASEWMCEQRVFNVFPEDYAARLNLVE 130
Query: 136 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT-EKAEELFERVKQSNLSFNALM 194
V G+ E++FE +P + + Y LL Y ++ T +KAE+ FE+++
Sbjct: 131 TVLGLEEAEKFFERIPENMRDYSVYENLLRSYTKSEKTLDKAEDTFEKMRDLGFLSKPSP 190
Query: 195 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 254
++ M++LY + + + V + E+ NV D L + S + D + ++
Sbjct: 191 FDTMISLYRKLNKRDMVKKLKYEMMENNVKID-RPIELNVLSIVSDFKRDYLDPLWNKYK 249
Query: 255 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL-- 312
+ DD + I S+L+ + V+ + I Q+ T L + GL
Sbjct: 250 KEGKLMDDEYR--------IRISYLLKLDD---VQGAEKIYQKWQPTGPKLDMSVPGLLI 298
Query: 313 ------GNKDKIDQIWKSLRMTKQKM 332
GN+ K++++ S+RM + M
Sbjct: 299 SRFRAEGNESKVEEMVNSIRMKRIVM 324
>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 154/325 (47%), Gaps = 15/325 (4%)
Query: 90 ELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHS----GER 145
+L +LK L S ++ AL + EW V + D I+LM ++ G S +
Sbjct: 150 DLISLLKALDYSGNWEKALLLFEWSVLNLGIANEKIDRHA-IELMVRILGRESQHTVASK 208
Query: 146 YFEGLPLSAKTSET--YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM 203
F+ +PL + YT +LH Y+ +A E+FER+ +S LS + + YN M+ +Y
Sbjct: 209 LFDVIPLDDYVLDVRAYTTILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVMLDVYG 268
Query: 204 SVGQV-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 262
+G+ +K+ +++E++ + + D FT + +S+C ID+ ++F + + G
Sbjct: 269 KMGRSWDKILELLDEMRSRGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSE-GYKPG 327
Query: 263 WVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 322
V Y L++++ A + + S L E E++ +TY+ ++ Y G ++ +
Sbjct: 328 TVTYNALLHVFGKAG-IFSEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAVVI 386
Query: 323 KSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSD 382
++ + Y I+++Y +G + + E+ DQ + +++ N +LG
Sbjct: 387 DAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELGCVP-NVATYNAVLGMLGK 445
Query: 383 VGLTEKANEF--HMLLLQKNCAPTN 405
L+E+ + HM L C+P +
Sbjct: 446 KSLSEEMMKILGHMKL--NGCSPNH 468
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 119/270 (44%), Gaps = 5/270 (1%)
Query: 140 IHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 197
I +F GL + TY ALLH++ A +A + ++++N +A+ YNE
Sbjct: 309 IDEAREFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNE 368
Query: 198 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 257
++ Y+ G E+ A+V++ + K ++P+ TY I++ +ID+ + D+M +
Sbjct: 369 VVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQM-MEL 427
Query: 258 GGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 317
G + Y N V + L L + + IT++ ++ + G
Sbjct: 428 GCVPNVATY-NAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKY 486
Query: 318 IDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLL 377
++Q+++ ++ + + ++S+Y G + ++ ++ ++ S I+ N LL
Sbjct: 487 VNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPC-INTYNALL 545
Query: 378 GAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
A + G + A + + K P+ S
Sbjct: 546 NALARRGDWKAAESVILDMRNKGFRPSETS 575
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+ +L+ +YA KAEE+ ++ S + + YN ++ + G +++ ++ E+
Sbjct: 680 THNSLMDMYARGGDCWKAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEM 739
Query: 219 KRKNVVPDIFTYNLWISSCAA 239
V P IFTYN +IS AA
Sbjct: 740 TSIGVGPCIFTYNTFISGYAA 760
>gi|297836834|ref|XP_002886299.1| hypothetical protein ARALYDRAFT_319921 [Arabidopsis lyrata subsp.
lyrata]
gi|297332139|gb|EFH62558.1| hypothetical protein ARALYDRAFT_319921 [Arabidopsis lyrata subsp.
lyrata]
Length = 424
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 81/155 (52%), Gaps = 13/155 (8%)
Query: 56 DDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMV 115
D LK RI R+ S T +++ W GNQ +SELR I+ L +S R+ HAL++S+WM+
Sbjct: 37 DTLKRRIERVQDSTVSITPLLREWCQIGNQTALSELRSIITSLHRSNRFFHALQVSDWMI 96
Query: 116 THKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEK 175
K + LS D+ R+ L KV G+ ++FE +P A+ + LL + EK
Sbjct: 97 EQKAYKLSSMDFERRLYLTAKVCGVEEAAKFFETVP--AEDHDMVVKLL-----GEMDEK 149
Query: 176 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 210
+++ LSF+ L+ + M + V +EK
Sbjct: 150 ------KMQPQGLSFDKLLTSYSMASDLDVQGMEK 178
>gi|4454476|gb|AAD20923.1| hypothetical protein [Arabidopsis thaliana]
Length = 424
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 57/96 (59%)
Query: 56 DDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMV 115
D LK RI R+ S T +++ W GNQ +S+LR I+ L +S R+ HAL++S+WM+
Sbjct: 37 DTLKRRIQRVQDSSVSITPLLREWCQRGNQTGLSKLRSIITSLHRSNRFSHALQVSDWMI 96
Query: 116 THKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLP 151
K + LS D+ R+ L KV G+ ++FE +P
Sbjct: 97 EQKAYKLSSMDFERRLFLAAKVGGVEEAAKFFETVP 132
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 138/305 (45%), Gaps = 8/305 (2%)
Query: 85 QATVSELRHILKELRKSQRYKHALEISEWMVTHKEF--VLSDSDYATRIDLMTKVFGIHS 142
++T SEL LK L +++ AL +W + K++ +L +S A I ++ K + S
Sbjct: 132 ESTSSELLAFLKGLGFHKKFDLALCAFDWFMKQKDYQSMLDNSVIAIVISMLGKEGRVSS 191
Query: 143 GERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMT 200
F GL + + +YT+L+ +A + +A +F+++++ + YN ++
Sbjct: 192 AANLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILN 251
Query: 201 LYMSVGQV-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG 259
++ +G K+ +VE++K + PD +TYN I+ C + + +EM +G
Sbjct: 252 VFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKA-AGF 310
Query: 260 SDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID 319
S D V Y L+++Y SH L E E + +TY+ LI YA G D+
Sbjct: 311 SHDKVTYNALLDVY-GKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAM 369
Query: 320 QIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGA 379
++ + K Y +LS + G ++ I ++ + + +I N +
Sbjct: 370 ELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKP-NICTFNAFIKM 428
Query: 380 FSDVG 384
+ + G
Sbjct: 429 YGNRG 433
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 106/250 (42%), Gaps = 3/250 (1%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
A + TY L+ ++A ++FE +K + S + + YN ++ +Y + ++
Sbjct: 276 APDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMK 335
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
V+ E++ P I TYN IS+ A +D+ + ++M+ + G D Y L++ +
Sbjct: 336 VLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMA-EKGTKPDVFTYTTLLSGF 394
Query: 274 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
A V + + E + + T++ I +Y G + +I+ + +
Sbjct: 395 ERAGK-VESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPD 453
Query: 334 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 393
+ +L+ + G EV + + K++ + N L+ A+S G E+A +
Sbjct: 454 IVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP-ERETFNTLISAYSRCGSFEQAMTVY 512
Query: 394 MLLLQKNCAP 403
+L P
Sbjct: 513 RRMLDAGVTP 522
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/245 (16%), Positives = 103/245 (42%), Gaps = 3/245 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY ALL +Y + ++A ++ ++ + S + + YN +++ Y G +++ + ++
Sbjct: 316 TYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQM 375
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K PD+FTY +S ++ +EM ++G + + + +Y
Sbjct: 376 AEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMR-NAGCKPNICTFNAFIKMYGNRGK 434
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
V+ E +T++ L+ ++ G ++ ++K ++ +
Sbjct: 435 FVDM-MKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFN 493
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
++S+Y G ++ + + + + D+S N +L A + G+ E++ + +
Sbjct: 494 TLISAYSRCGSFEQAMTVYRRMLDAGVTP-DLSTYNTVLAALARGGMWEQSEKVLAEMED 552
Query: 399 KNCAP 403
C P
Sbjct: 553 GRCKP 557
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 67/168 (39%), Gaps = 2/168 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T +++ +Y + KA E+ + +K+ + + YN +M ++ K ++ EI
Sbjct: 631 TLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREI 690
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K + PDI +YN I + + + EM DSG D + Y + Y S
Sbjct: 691 LAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMR-DSGIVPDVITYNTFIGSYAADSM 749
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 326
A + Q TY+ ++ Y L KD+ + LR
Sbjct: 750 FEEAIGVVRYMIKHGCRPNQN-TYNSIVDGYCKLNRKDEAKLFVEDLR 796
>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 730
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 136/289 (47%), Gaps = 12/289 (4%)
Query: 81 SEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGI 140
SE N ++ SEL I+K L + ++ ALE+ WM F A + ++ + +
Sbjct: 40 SEPNLSS-SELLSIMKGLGREGQWNKALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQL 98
Query: 141 HSGERYF-----EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 195
+ R F EG PL YT+L+ + + ++A FE++K++ + + Y
Sbjct: 99 TTVSRLFKSLREEGYPLDVY---AYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTY 155
Query: 196 NEMMTLYMSVGQV-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 254
N ++ LY G+ E + + EE+K + + PD +TYN I++CA+ ++ + +M
Sbjct: 156 NVIIDLYGKKGRSWENILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMK 215
Query: 255 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 314
S + D V Y L+++Y A N ++ L E E + +TY+ L+ + G
Sbjct: 216 -SSNCTPDRVTYNALLDVYGKAG-WYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGL 273
Query: 315 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 363
+ ++ S+ + Y +LS+Y G +++ EI +Q + S
Sbjct: 274 CNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTS 322
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 110/249 (44%), Gaps = 3/249 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY + A E+A ELF ++K SN + + + YN ++ +Y G + A V++E+
Sbjct: 190 TYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEM 249
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ +P+I TYN +S+ + + D M G D Y +L++ Y A
Sbjct: 250 ESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSM-VSKGIEPDVFTYTSLLSAYSRAGK 308
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ A + S T++ LI ++ N ++ I++ ++ + +
Sbjct: 309 VEQA-MEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWN 367
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
+L ++ G EV ++ K+ A + D + N L+ A+ G +++A + +LQ
Sbjct: 368 SLLGAFGKNGMYSEVLKVFRGMKK-AGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQ 426
Query: 399 KNCAPTNAS 407
C P A+
Sbjct: 427 AGCTPDLAT 435
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 75/181 (41%), Gaps = 2/181 (1%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
+ T+ A++ +Y +KA + F ++ + L + + YN +M +Y G K +
Sbjct: 538 TSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLR 597
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
E PD+ +YN I S + + + EM +G D Y V Y+
Sbjct: 598 ECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEM-VSNGIQPDSFTYNTFVGCYVNG 656
Query: 277 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 336
A S + K+ + +TY L+ Y +G +++++I K ++ + +
Sbjct: 657 GMFPEA-LSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERILKFIKSSDPNFSKAA 715
Query: 337 Y 337
Y
Sbjct: 716 Y 716
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/232 (18%), Positives = 105/232 (45%), Gaps = 5/232 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY ALL +Y A W +A + + ++ + N + YNE+++ + G A + + +
Sbjct: 225 TYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSM 284
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K + PD+FTY +S+ + ++Q + ++M S + + + L+ ++ +
Sbjct: 285 VSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMR-TSNCTPNSFTFNALIGMHGKNKN 343
Query: 279 LVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
+E + E ++ + +T++ L+ + G ++ ++++ ++ + +
Sbjct: 344 F--SEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATF 401
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
++ +Y G + I D Q+ + D++ N LL A + G E A
Sbjct: 402 NILIEAYGRCGSSDQALSIYDGMLQAGCTP-DLATFNTLLAALAREGRWEHA 452
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 91/230 (39%), Gaps = 23/230 (10%)
Query: 166 LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVP 225
+Y+ ++AE+ F ++ + +N M+++Y G ++K ++ + P
Sbjct: 512 VYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEP 571
Query: 226 DIFTYNLWIS---------SCAATLNIDQVKKFLDEMSCDSGG-SDDWVKYVNLVNIYIT 275
D+ TYN + C ATL C + G + D V Y ++ Y
Sbjct: 572 DVVTYNCLMGMYGREGMYRKCEATLR-----------ECMAAGQTPDLVSYNTVIFSYSK 620
Query: 276 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
L +A + E + Q TY+ + Y G + + K + T K
Sbjct: 621 HGQLSSA-TRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDEV 679
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGL 385
Y ++ +Y +G +EV I+ ++ +S+ +F +A R+ D L
Sbjct: 680 TYRTLVDAYCKIGKFEEVERIL-KFIKSSDPNFSKAAYRRIAARVDDYDL 728
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 109/282 (38%), Gaps = 42/282 (14%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSN-----LSFNALM--------YNEMMTLYMSV 205
TYT+LL Y+ A E+A E++ +++ SN +FNAL+ ++EMM ++ +
Sbjct: 295 TYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDM 354
Query: 206 ----------------------GQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 243
G +V V +K+ PD T+N+ I + +
Sbjct: 355 QACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSS 414
Query: 244 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 303
DQ D M +G + D + L+ +AE L E +S + I Y
Sbjct: 415 DQALSIYDGM-LQAGCTPDLATFNTLLAALAREGRWEHAE-LILDELNRSSYKPNDIAYA 472
Query: 304 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 363
++ YA G +K+ ++ +L T I + + L+ V E D +
Sbjct: 473 SMLHAYANGGELEKLKEMVDTLHTIYVPFTK---ILLKTFVLVYSKCSLVDEAEDAFLAM 529
Query: 364 ATSDF--DISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
+ D S N ++ + G+ +KA + LL P
Sbjct: 530 RHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEP 571
>gi|297847014|ref|XP_002891388.1| hypothetical protein ARALYDRAFT_336905 [Arabidopsis lyrata subsp.
lyrata]
gi|297337230|gb|EFH67647.1| hypothetical protein ARALYDRAFT_336905 [Arabidopsis lyrata subsp.
lyrata]
Length = 310
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 2/153 (1%)
Query: 76 IQRWVSE-GNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLM 134
++RW SE G+Q S +R ++K + ALE SEWM K F + DYA R+ L+
Sbjct: 40 LERWWSEQGDQVKPSYVRGVIKNFHDFNQCSKALEASEWMCEQKFFNIFSEDYAARLHLV 99
Query: 135 TKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWT-EKAEELFERVKQSNLSFNAL 193
V G+ E++FE +P + + Y LL Y ++ T +KAE FE+++
Sbjct: 100 ETVLGLEEAEKFFESIPENMRDYSVYDNLLRSYTKSEKTLDKAEATFEKMRDLGFLLKPS 159
Query: 194 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPD 226
+N M++LY + + + V + E+ +V D
Sbjct: 160 PFNSMISLYRHLKKKDMVKKLEREMMENDVRFD 192
>gi|224072985|ref|XP_002303946.1| predicted protein [Populus trichocarpa]
gi|222841378|gb|EEE78925.1| predicted protein [Populus trichocarpa]
Length = 451
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 127/301 (42%), Gaps = 47/301 (15%)
Query: 107 ALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHL 166
+L+ SEW+ K+ ++ DYA +D + KV G+ E++ E +P S + Y LL
Sbjct: 33 SLQFSEWLERSKQTDFTERDYACHLDCIAKVLGLWKAEKFIEKIPESFRGKLVYQTLLAS 92
Query: 167 YAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPD 226
+KAE +F +++ L +M+ +Y + + +K+ ++ +K +N+ P
Sbjct: 93 CVSVLNIKKAESVFRKMRDLGLPITVEACEQMIIIYKRL-EKKKIPNILLMMKDQNIKPS 151
Query: 227 IFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESST 286
TY L I + + ++K ++ M + D + + + A H
Sbjct: 152 FLTYKLLIDAKCQFNDTTGMEKLVEAMRNEGMELD-------VFALAVIARH-------- 196
Query: 287 LVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK---MTSRNYICILSS 343
Y +G KDK D I K + KQK + +R +LS
Sbjct: 197 ----------------------YISVGLKDKADLILKQIEKRKQKGGGLGARR--SLLSL 232
Query: 344 YLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
Y LG+ EVG I WK+ +D S C + A+ +G E+A ++LQ P
Sbjct: 233 YASLGNADEVGRI---WKE-CKADPKQSECIAAIRAWGKLGKVEEAEAVSEMMLQTWKNP 288
Query: 404 T 404
T
Sbjct: 289 T 289
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 137/305 (44%), Gaps = 8/305 (2%)
Query: 85 QATVSELRHILKELRKSQRYKHALEISEWMVTHKEF--VLSDSDYATRIDLMTKVFGIHS 142
++T SEL LK L +++ AL +W + K++ +L +S A I ++ K + S
Sbjct: 132 ESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSS 191
Query: 143 GERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMT 200
F GL + + +YT+L+ +A + +A +F+++++ + YN ++
Sbjct: 192 AANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILN 251
Query: 201 LYMSVGQV-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG 259
++ +G K+ +VE++K + PD +TYN I+ C + + +EM +G
Sbjct: 252 VFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKA-AGF 310
Query: 260 SDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID 319
S D V Y L+++Y SH L E + +TY+ LI YA G D+
Sbjct: 311 SYDKVTYNALLDVY-GKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAM 369
Query: 320 QIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGA 379
++ + K Y +LS + G ++ I ++ + + +I N +
Sbjct: 370 ELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKP-NICTFNAFIKM 428
Query: 380 FSDVG 384
+ + G
Sbjct: 429 YGNRG 433
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 107/250 (42%), Gaps = 3/250 (1%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
A + TY L+ ++A ++FE +K + S++ + YN ++ +Y + ++
Sbjct: 276 APDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMK 335
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
V+ E+ P I TYN IS+ A +D+ + ++M+ + G D Y L++ +
Sbjct: 336 VLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMA-EKGTKPDVFTYTTLLSGF 394
Query: 274 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
A V + S E + + T++ I +Y G ++ +I+ + +
Sbjct: 395 ERAGK-VESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPD 453
Query: 334 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 393
+ +L+ + G EV + + K++ + N L+ A+S G E+A +
Sbjct: 454 IVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP-ERETFNTLISAYSRCGSFEQAMTVY 512
Query: 394 MLLLQKNCAP 403
+L P
Sbjct: 513 RRMLDAGVTP 522
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 44/81 (54%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +L+++++ + K+EE+ + + + + YN ++ Y ++ + + E+
Sbjct: 666 TYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEM 725
Query: 219 KRKNVVPDIFTYNLWISSCAA 239
+ +VPD+ TYN +I S AA
Sbjct: 726 RNSGIVPDVITYNTFIGSYAA 746
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 66/168 (39%), Gaps = 2/168 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T +++ +Y + KA + + +K+ + + YN +M ++ K ++ EI
Sbjct: 631 TLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREI 690
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K + PDI +YN I + + + EM +SG D + Y + Y S
Sbjct: 691 LAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMR-NSGIVPDVITYNTFIGSYAADSM 749
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 326
A + Q TY+ ++ Y L KD+ + LR
Sbjct: 750 FEEAIGVVRYMIKHGCRPNQN-TYNSIVDGYCKLNRKDEAKLFVEDLR 796
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 53/121 (43%), Gaps = 1/121 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+ LL ++ + +F+ +K++ +N +++ Y G E+ V +
Sbjct: 456 TWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRM 515
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
V PD+ TYN +++ A +Q +K L EM D + + Y +L++ Y
Sbjct: 516 LDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEME-DGRCKPNELTYCSLLHAYANGKE 574
Query: 279 L 279
+
Sbjct: 575 I 575
>gi|224126121|ref|XP_002329666.1| predicted protein [Populus trichocarpa]
gi|222870547|gb|EEF07678.1| predicted protein [Populus trichocarpa]
Length = 821
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 148/321 (46%), Gaps = 11/321 (3%)
Query: 90 ELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHS----GER 145
+L +LK L S + A+ + EW+V + + D ++LM ++ G S +
Sbjct: 137 DLIGVLKALDLSGDCERAILLFEWLVLNLGTGNVNLDNQA-VELMARILGRESQHSIASK 195
Query: 146 YFEGLPLSAKTSET--YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM 203
F+ +PL + + YT +LH Y+ E+A +FE++ +S LS + YN M+ +Y
Sbjct: 196 LFDVIPLDDYSLDVRAYTTILHSYSRCGKYERAVAIFEKMNESGLSPTLVTYNVMLDVYG 255
Query: 204 SVGQV-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 262
+G+ K+ +++E++ K + D FT + IS+C +D+ K+F + G +
Sbjct: 256 KMGRSWNKILGLLDEMRSKGLGFDEFTCSTVISACGREGLLDEAKEFFVGLK-SQGYAPG 314
Query: 263 WVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 322
V Y L+ ++ A + + S + E E + +TY+ L+ Y G ++ +
Sbjct: 315 TVTYNALLQVFGKAG-IYSEALSIMKEMEDNNCPPDAVTYNELVAAYVRAGFYEEGAALI 373
Query: 323 KSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSD 382
++ K + Y ++++Y + + + DQ K+S + ++ N +LG
Sbjct: 374 DTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAP-NVCTYNAILGMLGK 432
Query: 383 VGLTEKANEFHMLLLQKNCAP 403
+E+ + + CAP
Sbjct: 433 KSQSEEMMKILCDMKVDGCAP 453
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 94/235 (40%), Gaps = 41/235 (17%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+ Y A + E+ L + + ++ + NA+ Y M+ Y QV+K + +++
Sbjct: 352 TYNELVAAYVRAGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQM 411
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS-----------------CDSGGSD 261
K P++ TYN + +++ K L +M C + G
Sbjct: 412 KESGCAPNVCTYNAILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMH 471
Query: 262 DWVKYV-------------NLVNIYITASHLVNAESSTLVEAEKSITQ-------RQWIT 301
+VK V + N ITAS ++ ++AEK + T
Sbjct: 472 KYVKRVFQEMKSCGFEPDRDTFNTLITASGRCGSD----IDAEKIYDEMLEAGFTPSVAT 527
Query: 302 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 356
Y+ L+ A G+ + + K ++ K + +Y IL+SY G++K + I
Sbjct: 528 YNALLNALARRGDWRTAESVIKDMKNKGFKPSETSYSLILNSYAKGGYVKGINRI 582
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +L+ LYA KAEE+ ++ S + + YN ++ + G + + + E+
Sbjct: 667 TYNSLMDLYARGGECWKAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEM 726
Query: 219 KRKNVVPDIFTYNLWISSCAAT---LNIDQVKKFLDEMSC 255
+ + P I TYN ++ AA ID+V ++ + C
Sbjct: 727 ISRGIRPCIVTYNTFVGGYAAKGMFAEIDEVLSYMTKHDC 766
>gi|168004269|ref|XP_001754834.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693938|gb|EDQ80288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 504
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 154/341 (45%), Gaps = 19/341 (5%)
Query: 67 LPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSD 126
LP ++ NV+ S G Q +E + E+++S ++ EWM+ +
Sbjct: 115 LPTETSFNVLLAAYSRGVQLEKAE--KLFHEMKESN---YSPGTVEWMIFS-----GIAT 164
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVK 184
Y T ++++ K + E F + T+T ++++Y A +++KA++LF ++
Sbjct: 165 YNTYLEVLGKSGRLSQAEDTFRDMQKQGILPAVNTFTIMINIYGKAYYSDKADDLFRSMR 224
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
++ N Y +M + G + + E++ +PD++TYN + + + +
Sbjct: 225 KALCPPNLYTYTALMNAHAREGNCVRAEEIFAELQSVGFIPDVYTYNALLEAYSRGEHPT 284
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES--STLVEAEKSITQRQWITY 302
K+ M ++G D V Y L++ + A +A++ ++ EA T + ++
Sbjct: 285 GAKEVFQAM-VEAGVRPDQVSYNILIDAFGRAGLTADAQAVYDSMKEAGFKPTMK---SH 340
Query: 303 DFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ 362
L+ YA G + +++ + + + K + + +LS+Y G + E+ +++
Sbjct: 341 MLLLSSYAKAGKVTEAERLVREIENSGVKPDTFMFNSLLSAYGNSGRIDEMESLLESM-V 399
Query: 363 SATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
S+ + DIS N L+ A++ G EKA E L K P
Sbjct: 400 SSVAKPDISTLNTLINAYAQGGYIEKAEEVFNSLESKGLTP 440
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T L++ YA + EKAEE+F ++ L+ + + + +M Y K + +++
Sbjct: 409 TLNTLINAYAQGGYIEKAEEVFNSLESKGLTPDVMSWTSLMGAYAQRKLFRKCVSIFQKM 468
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 251
+ +PD T +++SSC + +QVK+ D
Sbjct: 469 VKAGCIPDRATAKVFLSSCRSP---EQVKEVTD 498
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 96/257 (37%), Gaps = 12/257 (4%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
+ L+ Y +K +AE+ F +K +N ++ Y Q+EK + E+K
Sbjct: 86 FNMLIDAYGKSKQWREAEKTFHLMKDFQCLPTETSFNVLLAAYSRGVQLEKAEKLFHEMK 145
Query: 220 RKNVVP---------DIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 270
N P I TYN ++ + + Q + +M G + ++
Sbjct: 146 ESNYSPGTVEWMIFSGIATYNTYLEVLGKSGRLSQAEDTFRDMQ-KQGILPAVNTFTIMI 204
Query: 271 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 330
NIY A + A+ K++ TY L+ +A GN + ++I+ L+
Sbjct: 205 NIYGKAYYSDKAD-DLFRSMRKALCPPNLYTYTALMNAHAREGNCVRAEEIFAELQSVGF 263
Query: 331 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 390
Y +L +Y H E+ ++ +S N L+ AF GLT A
Sbjct: 264 IPDVYTYNALLEAYSRGEHPTGAKEVFQAMVEAGVRPDQVS-YNILIDAFGRAGLTADAQ 322
Query: 391 EFHMLLLQKNCAPTNAS 407
+ + + PT S
Sbjct: 323 AVYDSMKEAGFKPTMKS 339
>gi|168049701|ref|XP_001777300.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671276|gb|EDQ57830.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 291
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 116/266 (43%), Gaps = 41/266 (15%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSET-YTALLHLYAGAKWTEKAEELFERVKQ 185
Y T ID + + ++ F + S K Y +LLH Y + E A ELF +KQ
Sbjct: 14 YTTIIDTLGSSGCLDLAKKIFSDMDDSVKKDTVLYNSLLHAYCKSGQVETANELFNSMKQ 73
Query: 186 SNLSFNALMYNEMMTLYM--SVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 243
+ + YN +M +Y+ VG + KV + +E+ + + PD+ +Y++ +++CA ++
Sbjct: 74 KDCRPDLSTYNTIMNMYVKTDVG-LTKVLSLFKEMCLQGIQPDVVSYDILLAACAPKQHV 132
Query: 244 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA--------------------------- 276
+ ++ D M G V Y +L+ +Y A
Sbjct: 133 KEAQRIFDTMKKRRGIKPTVVTYTSLITVYANAGIYSSPNQLCPLFGEMVAEKCQPNVKT 192
Query: 277 -SHLVNA--------ESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 326
+ L+N+ E+ T+ EA K + +TY+ LI +Y G +D +++ +
Sbjct: 193 FTSLINSCRKGGHVEEAQTIFEAMKEYGVKPNVVTYNALINVYTERGEQDGAQRVFLQMV 252
Query: 327 MTKQKMTSRNYICILSSYLMLGHLKE 352
+ + T ++ ++SS+ G KE
Sbjct: 253 QSGLQPTGVSFTVLMSSFKATGAFKE 278
>gi|449436321|ref|XP_004135941.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Cucumis sativus]
gi|449514880|ref|XP_004164505.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Cucumis sativus]
Length = 477
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 116/258 (44%), Gaps = 9/258 (3%)
Query: 136 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 195
K+FG+ ++++E +TYT LL L K E+A LFE + L + +Y
Sbjct: 112 KIFGLLRQQQWYE------PRCQTYTKLLMLLGKCKQPEQASLLFEIMFSEGLKPSIDVY 165
Query: 196 NEMMTLYMSVGQVEKVALVVEEIKR-KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 254
+++ Y G + K V+E+K + PD+ TY++ I C D +KK L +MS
Sbjct: 166 TALVSAYGQSGLLHKAISTVDEMKSISDCKPDVHTYSILIDCCTRLRRFDLLKKILADMS 225
Query: 255 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 314
C G + + V Y ++N + A ES L E IT++ I Y
Sbjct: 226 C-LGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIESDSCPPDLITFNTFIRAYGNSEQ 284
Query: 315 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 374
+K+++ +K ++ + Y ++SSY G ++ +++ ++ S I N
Sbjct: 285 IEKMEKWYKEFQLMGIEPDIWTYNSMISSYGKAGMYDKMKSVLNFMEKRFFSP-TIVTMN 343
Query: 375 RLLGAFSDVGLTEKANEF 392
++ +F G E+ E+
Sbjct: 344 TIIDSFGRAGNIEEMEEY 361
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 111/275 (40%), Gaps = 46/275 (16%)
Query: 130 RIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELF-ERVKQSNL 188
R DL+ K+ S L ++ T TY +++ + AK E+ E L E ++ +
Sbjct: 213 RFDLLKKILADMSC------LGITCNTV-TYNTIINGFGKAKMFEQMESLLLEMIESDSC 265
Query: 189 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 248
+ + +N + Y + Q+EK+ +E + + PDI+TYN ISS D++K
Sbjct: 266 PPDLITFNTFIRAYGNSEQIEKMEKWYKEFQLMGIEPDIWTYNSMISSYGKAGMYDKMKS 325
Query: 249 FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIIL 308
L+ M EK +T + +I
Sbjct: 326 VLNFM-------------------------------------EKRFFSPTIVTMNTIIDS 348
Query: 309 YAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDF 368
+ GN +++++ +K+++ K S Y ++++Y G L++V I+ Q + S
Sbjct: 349 FGRAGNIEEMEEYFKNMKFQGMKPNSVTYCSLVNAYGKSGDLEKVDSILRQIENSDVVP- 407
Query: 369 DISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
D N L+ + G K E + + + C P
Sbjct: 408 DTPLFNCLINVYGQAGNVRKMGELFLEMKENKCVP 442
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 2/113 (1%)
Query: 129 TRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQS 186
T ID + I E YF+ + S TY +L++ Y + EK + + +++ S
Sbjct: 344 TIIDSFGRAGNIEEMEEYFKNMKFQGMKPNSVTYCSLVNAYGKSGDLEKVDSILRQIENS 403
Query: 187 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 239
++ + ++N ++ +Y G V K+ + E+K VPD T+ I + A
Sbjct: 404 DVVPDTPLFNCLINVYGQAGNVRKMGELFLEMKENKCVPDGITFATMIRALKA 456
>gi|387219245|gb|AFJ69331.1| putative udp-glucosyltransferase, partial [Nannochloropsis gaditana
CCMP526]
Length = 521
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 108/256 (42%), Gaps = 14/256 (5%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQS-----------NLSFNALMYNEMMTLYMSVGQ 207
TYT L+H YAG TE AE + R+ + + N + Y +MT Y + G
Sbjct: 230 TYTTLMHAYAGRGDTEGAEAVLRRMLEGEGGRVREEEVLRVLPNVMTYTTLMTAYAAGGD 289
Query: 208 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 267
VE V+E ++ + P++ TY + +++ ++ + L M + + + Y
Sbjct: 290 VEGSEAVLERMEEACIAPNVMTYTVLMTAYTLRGDVKGAEGVLRRM-ISAYVAPNANTYT 348
Query: 268 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 327
L++ Y + AE L E + +T+ L+ +YA G + + +
Sbjct: 349 TLLHAYTVNGNAAGAE-EVLARMEAAGVLPTALTFATLMTVYAARGEVESAKGVLARMEA 407
Query: 328 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 387
T+ + +L++Y++ G + +++ + + A DF ++ N L+ ++D G
Sbjct: 408 AGVGPTAMAFDTLLNAYVVAGDVGGAEQVLRRREAEAYPDFPLT-YNTLMNGYADKGDVA 466
Query: 388 KANEFHMLLLQKNCAP 403
A + K P
Sbjct: 467 GAEGVLARMRAKGVGP 482
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 59/131 (45%), Gaps = 1/131 (0%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
A + TYT LLH Y AEE+ R++ + + AL + +MT+Y + G+VE
Sbjct: 341 APNANTYTTLLHAYTVNGNAAGAEEVLARMEAAGVLPTALTFATLMTVYAARGEVESAKG 400
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
V+ ++ V P ++ +++ ++ ++ L ++ D + Y L+N Y
Sbjct: 401 VLARMEAAGVGPTAMAFDTLLNAYVVAGDVGGAEQVLRRREAEA-YPDFPLTYNTLMNGY 459
Query: 274 ITASHLVNAES 284
+ AE
Sbjct: 460 ADKGDVAGAEG 470
>gi|302789381|ref|XP_002976459.1| hypothetical protein SELMODRAFT_416459 [Selaginella moellendorffii]
gi|300156089|gb|EFJ22719.1| hypothetical protein SELMODRAFT_416459 [Selaginella moellendorffii]
Length = 509
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 127/283 (44%), Gaps = 11/283 (3%)
Query: 76 IQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMT 135
I++W+ EGN T L +++ LR +RY AL +W+ K + R+DL +
Sbjct: 52 IKQWIREGNSVTSCGLDRVVRRLRSRKRYLQALMAVDWVANEKVIPFGYHETLQRLDLCS 111
Query: 136 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALM- 194
+ + F LP + + Y LL +Y E AE+ + ++ + +L
Sbjct: 112 RCHHVTRTLLLFRRLPKQWRGEDAYCILLEMYYKRDMLEDAEKTMQELR--GIGIKSLQP 169
Query: 195 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA-TLNIDQVKKFLDEM 253
Y+ M++ Y G + +V EIK + D Y + +++ + ++ V+ L EM
Sbjct: 170 YHLMLSFYKLRGMEMRFERMVTEIKGSGLALDRSFYTILLAARDSFGGDMVAVEDVLAEM 229
Query: 254 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD----FLIILY 309
G D V + + IY+ S L + L EKS+ ++ + ++ ++
Sbjct: 230 E-GRGLKLDAVGCLAVAGIYLR-SGLRHKSERVLQRLEKSLKSGEFKYSNSIRRRMLAMF 287
Query: 310 AGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 352
LG++D +D+IW S+ + T ++I + ++ +G + E
Sbjct: 288 GKLGDRDAVDRIWHSIERSAST-TVEDFIFGIEAFGRVGKMDE 329
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 114/247 (46%), Gaps = 8/247 (3%)
Query: 146 YFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSV 205
+ EG +S TY+ L+ Y + E A+++ E ++++ S N + YN ++
Sbjct: 233 FMEGAGISPDVY-TYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRA 291
Query: 206 GQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVK 265
G +E+ +E++ +VPD FTY I+ DQ K LDEMSC +G + V
Sbjct: 292 GAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSC-AGLMPNVVV 350
Query: 266 YVNLVNIYITASHLVNAESSTLVEAEKSI--TQRQWITYDFLIILYAGLGNKDKIDQIWK 323
Y L++ ++ NA+ + + E S Q ITYD LI LG + +I K
Sbjct: 351 YSTLIDGFMRQG---NADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILK 407
Query: 324 SLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDV 383
+ + Y ++ +L + +E ++++ ++ S ++ + ++ +
Sbjct: 408 QMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISP-NVYTYSIIINGLCQI 466
Query: 384 GLTEKAN 390
G +E+A+
Sbjct: 467 GESERAS 473
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY+ +++ +E+A L E++ L NA +Y +++ Y G ++++
Sbjct: 455 TYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKM 514
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
R+N+ PD++ YN I + +D+ ++ DEM + G + Y L++ Y A +
Sbjct: 515 TRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEM-LEKGFQPNDFTYGGLIHGYSMAGN 573
Query: 279 LVNAE 283
L AE
Sbjct: 574 LEKAE 578
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 92/210 (43%), Gaps = 11/210 (5%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+H Y+ A EKAE+L ++ S L+ N +Y +++ Y +EKV+ ++ +
Sbjct: 560 TYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSM 619
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K ++PD Y + I + +++ ++ L + +G D + Y +L++ + A+
Sbjct: 620 LEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIE-KNGLVPDSLIYGSLISGFCKAAD 678
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQ---IWKSLRMTKQKMTSR 335
+ A L E K + Y+ LI G D I I+ S+
Sbjct: 679 MEKA-VGLLDEMAKKGIEPGISCYNALI---DGFCKSDDISHARNIFNSIICKGLPPNCV 734
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSAT 365
Y ++ Y G +++ ID + + T
Sbjct: 735 TYTTLIDGYCKAGDIRDA---IDLYNEMLT 761
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 88/195 (45%), Gaps = 20/195 (10%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y ++H + + + A + ++++ L ++L+Y +++ + +EK +++E+
Sbjct: 631 YGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMA 690
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
+K + P I YN I + +I + + + C G + V Y L++ Y A +
Sbjct: 691 KKGIEPGISCYNALIDGFCKSDDISHARNIFNSIIC-KGLPPNCVTYTTLIDGYCKAGDI 749
Query: 280 VNA---ESSTLVEAEKSITQRQWITYDFLI--ILYAGLGNKDKIDQIWKSLRMTKQKMTS 334
+A + L E + D + +L AG N + Q +L +T ++M +
Sbjct: 750 RDAIDLYNEMLTEG---------VAPDAFVYSVLAAGCSNSGDLQQ---ALFIT-EEMIA 796
Query: 335 RNYICILSSYLMLGH 349
R Y I+SS+ L H
Sbjct: 797 RGY-AIISSFNTLVH 810
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 47/247 (19%), Positives = 103/247 (41%), Gaps = 3/247 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+ +A + +++ + + + YN ++ ++ E+ L++ E+
Sbjct: 385 TYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEM 444
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
++ + P+++TY++ I+ ++ L++M D + +V Y L++ Y
Sbjct: 445 RKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFV-YAPLISGYCREGS 503
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
A TL + + Y+ LII + +G D+ + + + + Y
Sbjct: 504 FSLA-CETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYG 562
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
++ Y M G+L++ +++ Q S + D L G F L EK + +L+
Sbjct: 563 GLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNL-EKVSSTLKSMLE 621
Query: 399 KNCAPTN 405
K P N
Sbjct: 622 KGLMPDN 628
>gi|302798903|ref|XP_002981211.1| hypothetical protein SELMODRAFT_420692 [Selaginella moellendorffii]
gi|300151265|gb|EFJ17912.1| hypothetical protein SELMODRAFT_420692 [Selaginella moellendorffii]
Length = 816
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 134/322 (41%), Gaps = 40/322 (12%)
Query: 68 PKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDY 127
P R A +I W+S GN + L I +L +R AL+I W+V K F ++ DY
Sbjct: 111 PTR-ALKIIHAWISRGNLVSKEALISICHKLCYIRRQIRALQIINWIVDDKPFTVTPRDY 169
Query: 128 ATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN 187
A +I L + ER ++ +P KT E TAL+ + + KAE +K +
Sbjct: 170 ALQIKLTCRYASPIKAERIYDRVPAELKTEEVSTALIASMSRSNVMLKAEAWHTALKLN- 228
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 247
NA N MM L++ + +V + +++ P+ TY L
Sbjct: 229 ---NARACNVMMILFLRRNRHREVLQLYQDLVASGGQPNPLTYLLLF------------- 272
Query: 248 KFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLII 307
KY N + L A + L + + + + T +++
Sbjct: 273 -----------------KYRNRIG---AIDGLEEAAEAALKKIDVHDEKVRNATRSDMMV 312
Query: 308 LYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSD 367
+YA LG D ++++W + + R ++ ++++ +LG + ++++Q ++
Sbjct: 313 VYAYLGKPDMVEKLWSMIHKESWTLAGR-FVAAINAFGILGKISRAEDVLNQVLKTRKKA 371
Query: 368 FDISACNRLLGAFSDVGLTEKA 389
C ++G ++ G+ EKA
Sbjct: 372 IQKPYCA-MIGVYAKHGMMEKA 392
>gi|147819559|emb|CAN76564.1| hypothetical protein VITISV_029137 [Vitis vinifera]
Length = 449
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 103/240 (42%), Gaps = 2/240 (0%)
Query: 168 AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 227
A AK E++ E KQ N + ++TLY G E + +E+ + N +
Sbjct: 181 AKAKKFSFIEDILEHQKQYNEISTEVFAVRLITLYGKAGMFEHAHKLFDEMPKLNCERTV 240
Query: 228 FTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTL 287
++N +S+C + D++ F E+ + G D V Y LVN + L +A S L
Sbjct: 241 MSFNALLSACVNSKKFDKIDGFFQELPRNLGIVPDVVSYNILVNAFCEMGSLDSA-LSVL 299
Query: 288 VEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 347
E EK + IT++ L+ ++ G+ ++IW ++ R+Y L +
Sbjct: 300 DEMEKVGLEPDLITFNTLLNVFYQSGSNADGEKIWDLMKKNNVAPNVRSYNAKLRGVISE 359
Query: 348 GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
+ E +ID+ K S D+ N L+ F + G E+A +H + P A+
Sbjct: 360 NRMSEAVNLIDEMKTSGIKP-DVFTLNSLMKGFCNAGNLEEAKRWHSEIAINELPPVRAT 418
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/98 (20%), Positives = 54/98 (55%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+ LL+++ + E++++ +K++N++ N YN + +S ++ + +++E+
Sbjct: 313 TFNTLLNVFYQSGSNADGEKIWDLMKKNNVAPNVRSYNAKLRGVISENRMSEAVNLIDEM 372
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCD 256
K + PD+FT N + N+++ K++ E++ +
Sbjct: 373 KTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWHSEIAIN 410
>gi|359496222|ref|XP_002263756.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g13150-like [Vitis vinifera]
Length = 379
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 107/246 (43%), Gaps = 3/246 (1%)
Query: 162 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 221
A+L L A AK E++ E KQ N + +MTLY G E + +E+ +
Sbjct: 63 AVLTL-AKAKKFSFIEDILEHQKQYNEISTEVFAVRLMTLYGKAGMFEHAHKLFDELPKL 121
Query: 222 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 281
N + ++N +S C + D++ F E+ + G D V Y +VN + L +
Sbjct: 122 NCERTVVSFNALLSVCVNSKKFDKIDGFFQELPGNLGVVPDVVSYNIIVNAFCEMGSLDS 181
Query: 282 AESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICIL 341
A S L E EK + IT++ L+ + G+ ++IW ++ R+Y L
Sbjct: 182 A-LSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKL 240
Query: 342 SSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 401
+ + E E+ID+ K S D+ N L+ F + G E+A ++ + +
Sbjct: 241 RGVISENRMSEAVELIDEMKTSGIKP-DVFTLNSLMKGFCNAGNLEEAKRWYSEIARNEL 299
Query: 402 APTNAS 407
P A+
Sbjct: 300 PPVRAT 305
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/174 (19%), Positives = 80/174 (45%), Gaps = 7/174 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+ LL+ + E++++ +K++N++ N YN + +S ++ + +++E+
Sbjct: 200 TFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKLRGVISENRMSEAVELIDEM 259
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K + PD+FT N + N+++ K++ E++ + Y+ L+ +
Sbjct: 260 KTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNE-LPPVRATYMTLIPFLVEKGD 318
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLI-ILYAGLGNKDKIDQIWKSLRMTKQK 331
A E K + R+W+ L+ + GL + KI++ + + + K K
Sbjct: 319 FDMA-----TELCKEVCSRRWLIEPALLQQVLEGLVKESKIEEATELVELAKLK 367
>gi|359496212|ref|XP_003635178.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
mitochondrial-like [Vitis vinifera]
Length = 379
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 3/246 (1%)
Query: 162 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 221
A+L L A AK E++ E +Q N + +MTLY + G + + +E+ +
Sbjct: 63 AVLTL-AKAKKLSFIEDILEHQEQYNEISTEVFAVRLMTLYGTAGMFDHAHKLFDELPKL 121
Query: 222 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 281
N + ++N +S+C + D++ F E+ + G D V Y LVN + L +
Sbjct: 122 NCERTVMSFNALLSACVNSKKFDKIDGFFQELPGNLGIVPDVVSYNILVNAFCEMGSLDS 181
Query: 282 AESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICIL 341
A S L E EK + IT++ L+ + G+ ++IW ++ R+Y L
Sbjct: 182 A-LSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKL 240
Query: 342 SSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 401
+ + E E+ID+ K S D+ N L+ F + G E+A ++ + +
Sbjct: 241 RGVISENRMSEAVELIDEMKTSGIKP-DVFTLNSLMKGFCNAGNLEEAKRWYSEIARNEL 299
Query: 402 APTNAS 407
P A+
Sbjct: 300 PPVRAT 305
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/174 (19%), Positives = 80/174 (45%), Gaps = 7/174 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+ LL+ + E++++ +K++N++ N YN + +S ++ + +++E+
Sbjct: 200 TFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKLRGVISENRMSEAVELIDEM 259
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K + PD+FT N + N+++ K++ E++ + Y+ L+ +
Sbjct: 260 KTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNE-LPPVRATYMTLIPFLVEKGD 318
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLI-ILYAGLGNKDKIDQIWKSLRMTKQK 331
A E K + R+W+ L+ + GL + KI++ + + + K K
Sbjct: 319 FEMA-----TELCKEVCSRRWLIEPALLQQVLEGLVKESKIEEATELVELEKLK 367
>gi|302822814|ref|XP_002993063.1| hypothetical protein SELMODRAFT_431180 [Selaginella moellendorffii]
gi|300139155|gb|EFJ05902.1| hypothetical protein SELMODRAFT_431180 [Selaginella moellendorffii]
Length = 570
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 118/263 (44%), Gaps = 12/263 (4%)
Query: 71 SATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATR 130
++ NV++ + T + +R +L +L ++++YK +++ +M+ ++F L + DY +
Sbjct: 113 ASRNVVRVFRENELDMTKAMMRGVLFKLLRNEKYKPGWKVANYMIRSEKFELGELDYMFQ 172
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEK----AEELFERVKQS 186
I + E F LP K + ALL L AG+ + E LF+ +K
Sbjct: 173 IAFAALAGCDRAAENMFANLPRVYKRKK---ALLVLMAGSSPQRENRVVMERLFKELKHR 229
Query: 187 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 246
+ A N+MM + +++ + EE K V PD+ +YNL++ N +
Sbjct: 230 SWYTEASALNQMMLFSLQPDLRKRIPDLFEEAKSLGVAPDVSSYNLYLGFHCKEKNASGL 289
Query: 247 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT----QRQWITY 302
++ + D D + L YI+ A LVE E+ + +R+ TY
Sbjct: 290 EEVYQMLQEDPNARPDESTLLILACGYISVGCFDKA-GKALVELEEGLDSGLFRRKQATY 348
Query: 303 DFLIILYAGLGNKDKIDQIWKSL 325
+ L+ LY +K+ ++ IW L
Sbjct: 349 NKLLRLYGDTKDKEGVESIWSIL 371
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 111 SEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGA 170
S W + + + Y+ I K G+H E F + +T++ A+L +YA
Sbjct: 366 SIWSILSSRPLKAVDSYSYAIAAFGKAEGVHKAEEIFAKVDGLLETNQV-IAMLSVYAHY 424
Query: 171 KWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
+ +KA ELF+++ + + ++Y ++ Y+ G+V+K V
Sbjct: 425 GYADKARELFQKLPRKRMKHRLVVYKYLIAGYLREGEVKKALQV 468
>gi|422294672|gb|EKU21972.1| putative udp-glucosyltransferase, partial [Nannochloropsis gaditana
CCMP526]
Length = 535
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 108/256 (42%), Gaps = 14/256 (5%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQS-----------NLSFNALMYNEMMTLYMSVGQ 207
TYT L+H YAG TE AE + R+ + + N + Y +MT Y + G
Sbjct: 244 TYTTLMHAYAGRGDTEGAEAVLRRMLEGEGGRVREEEVLRVLPNVMTYTTLMTAYAAGGD 303
Query: 208 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 267
VE V+E ++ + P++ TY + +++ ++ + L M + + + Y
Sbjct: 304 VEGSEAVLERMEEACIAPNVMTYTVLMTAYTLRGDVKGAEGVLRRM-ISAYVAPNANTYT 362
Query: 268 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 327
L++ Y + AE L E + +T+ L+ +YA G + + +
Sbjct: 363 TLLHAYTVNGNAAGAE-EVLARMEAAGVLPTALTFATLMTVYAARGEVESAKGVLARMEA 421
Query: 328 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 387
T+ + +L++Y++ G + +++ + + A DF ++ N L+ ++D G
Sbjct: 422 AGVGPTAMAFDTLLNAYVVAGDVGGAEQVLRRREAEAYPDFPLT-YNTLMNGYADKGDVA 480
Query: 388 KANEFHMLLLQKNCAP 403
A + K P
Sbjct: 481 GAEGVLARMRAKGVGP 496
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 59/131 (45%), Gaps = 1/131 (0%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
A + TYT LLH Y AEE+ R++ + + AL + +MT+Y + G+VE
Sbjct: 355 APNANTYTTLLHAYTVNGNAAGAEEVLARMEAAGVLPTALTFATLMTVYAARGEVESAKG 414
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
V+ ++ V P ++ +++ ++ ++ L ++ D + Y L+N Y
Sbjct: 415 VLARMEAAGVGPTAMAFDTLLNAYVVAGDVGGAEQVLRRREAEA-YPDFPLTYNTLMNGY 473
Query: 274 ITASHLVNAES 284
+ AE
Sbjct: 474 ADKGDVAGAEG 484
>gi|302780277|ref|XP_002971913.1| hypothetical protein SELMODRAFT_412643 [Selaginella moellendorffii]
gi|300160212|gb|EFJ26830.1| hypothetical protein SELMODRAFT_412643 [Selaginella moellendorffii]
Length = 570
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 119/263 (45%), Gaps = 12/263 (4%)
Query: 71 SATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATR 130
++ NV++ + T + +R +L +L ++++YK +++ +M+ ++F L + DY +
Sbjct: 113 ASRNVVRVFRENELDMTKAMMRGVLFKLLRNEKYKPGWKVANYMIRSEKFELGELDYMFQ 172
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEK----AEELFERVKQS 186
I + E F LP K + ALL L AG+ + E+LF+ +K
Sbjct: 173 IAFAALAGCDRAAENIFANLPRVYKRKK---ALLVLMAGSSPQRENRVVMEKLFKELKHR 229
Query: 187 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 246
+ A N+MM + +++ + EE K V PD+ +YNL++ N +
Sbjct: 230 SWYTEASGLNQMMLFSLQPDLRKRIPDLFEEAKSLGVAPDVSSYNLYLGFHCKEKNASGL 289
Query: 247 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT----QRQWITY 302
++ + D D + L YI+ A LVE E+ + +R+ TY
Sbjct: 290 EEVYQMLQEDPNARPDESTLLILACGYISVGCFDKA-GKALVELEEGLDSGLFRRKQATY 348
Query: 303 DFLIILYAGLGNKDKIDQIWKSL 325
+ L+ LY +K+ ++ IW L
Sbjct: 349 NKLLRLYGDTKDKEGVENIWSIL 371
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Query: 113 WMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKW 172
W + + + Y+ I K G+H E F + +T++ A+L +Y +
Sbjct: 368 WSILSSRPLKAVDSYSYAIAAFGKAEGVHKAEEIFAKVDGLLETNQV-IAMLSVYTHYGY 426
Query: 173 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
+KA ELF+++ + + ++Y ++ Y+ G+V+K V
Sbjct: 427 ADKARELFQKLPRKRMKHRLVVYKYLIAGYLREGEVKKALQV 468
>gi|302801850|ref|XP_002982681.1| hypothetical protein SELMODRAFT_445231 [Selaginella moellendorffii]
gi|300149780|gb|EFJ16434.1| hypothetical protein SELMODRAFT_445231 [Selaginella moellendorffii]
Length = 1208
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 134/322 (41%), Gaps = 40/322 (12%)
Query: 68 PKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDY 127
P R A +I W+S GN + L I +L +R AL+I W+V K F ++ DY
Sbjct: 100 PTR-ALKIIHAWISRGNLVSKEALISICHKLCYIRRQIRALQIINWIVDDKPFTVTPRDY 158
Query: 128 ATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN 187
A +I L + ER ++ +P KT E TAL+ + + KAE +K +
Sbjct: 159 ALQIKLTCRYASPIKAERIYDRVPAELKTEEVSTALIASMSRSNVMLKAEAWHTALKLN- 217
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 247
NA N MM L++ + +V + +++ P+ TY L ID ++
Sbjct: 218 ---NARACNMMMILFLRRNRHREVLQLYQDLVASGGQPNPLTYLLLFKYRNRIGAIDGLE 274
Query: 248 KFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLII 307
+ + L I + + NA S +++
Sbjct: 275 EAAE---------------AALKKIDVHDEKVRNATRSD------------------MMV 301
Query: 308 LYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSD 367
+YA LG D ++++W + + R ++ ++++ +LG + ++++Q ++
Sbjct: 302 VYAYLGKPDMVEKLWSMIHKESWTLAGR-FVAAINAFGILGKISRAEDVLNQVLKTRKKA 360
Query: 368 FDISACNRLLGAFSDVGLTEKA 389
C ++G ++ G+ EKA
Sbjct: 361 IQKPYCA-MIGVYAKHGMMEKA 381
>gi|147791423|emb|CAN76850.1| hypothetical protein VITISV_005998 [Vitis vinifera]
Length = 340
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 106/246 (43%), Gaps = 3/246 (1%)
Query: 162 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 221
A+L L A AK E++ E KQ N + +MTLY G E + +E +
Sbjct: 24 AVLTL-AKAKKFSFIEDILEHQKQYNEISTEVFAVRLMTLYGKAGMFEHAHKLFDEXPKL 82
Query: 222 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 281
N + ++N +S C + D++ F E+ + G D V Y +VN + L +
Sbjct: 83 NCERTVVSFNALLSVCVXSKKFDKIDGFFQELPGNLGVVPDVVSYNIIVNAFCEMGSLDS 142
Query: 282 AESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICIL 341
A S L E EK + IT++ L+ + G+ ++IW ++ R+Y L
Sbjct: 143 A-LSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKL 201
Query: 342 SSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 401
+ + E E+ID+ K S D+ N L+ F + G E+A ++ + +
Sbjct: 202 RGVISENRMSEAVELIDEMKTSGIKP-DVFTLNSLMKGFCNAGNLEEAKRWYSEIARNEL 260
Query: 402 APTNAS 407
P A+
Sbjct: 261 PPVRAT 266
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 34/174 (19%), Positives = 80/174 (45%), Gaps = 7/174 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+ LL+ + E++++ +K++N++ N YN + +S ++ + +++E+
Sbjct: 161 TFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKLRGVISENRMSEAVELIDEM 220
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K + PD+FT N + N+++ K++ E++ + Y+ L+ +
Sbjct: 221 KTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNE-LPPVRATYMTLIPFLVEKGD 279
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLI-ILYAGLGNKDKIDQIWKSLRMTKQK 331
A E K + R+W+ L+ + GL + KI++ + + + K K
Sbjct: 280 FDMA-----TELCKEVCSRRWLIEPALLQQVLEGLVKESKIEEATELVELAKLK 328
>gi|147812055|emb|CAN60032.1| hypothetical protein VITISV_006384 [Vitis vinifera]
Length = 42
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 39/42 (92%)
Query: 327 MTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDF 368
MTKQK+ SR+Y+CILSSY+MLGH+K+VG +ID+WK+S T+DF
Sbjct: 1 MTKQKIKSRSYVCILSSYVMLGHIKDVGIVIDEWKKSTTTDF 42
>gi|302798623|ref|XP_002981071.1| hypothetical protein SELMODRAFT_444771 [Selaginella moellendorffii]
gi|300151125|gb|EFJ17772.1| hypothetical protein SELMODRAFT_444771 [Selaginella moellendorffii]
Length = 470
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 126/289 (43%), Gaps = 37/289 (12%)
Query: 76 IQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMT 135
I++W GN+ T S L +L+ +R + + +++I W+V K +++ DY + L
Sbjct: 61 IKQWERSGNKLTRSMLAMLLQRMRCRRMHTKSVQILSWLVEKKPIEVTEGDYEQLVTLAC 120
Query: 136 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 195
+ + E+YF LP ++AL+ YA KAE L R S L Y
Sbjct: 121 RDSDYETAEKYFYSLPSHLSKWPAFSALVAGYASRNLMAKAENLM-RTGTSPLPQP---Y 176
Query: 196 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 255
+ M+ +Y+ + +K+ + + +K + P++ TY + + KF D +
Sbjct: 177 SAMILMYIRRAEYQKIVKIYKSMKADGIEPNVITYAVLL-------------KFKDRIGP 223
Query: 256 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 315
G D + + + +E +R I + ++ YA LG
Sbjct: 224 IKGLEQDVEDALGKIKL-----------------SEMCAAKRPAIAGN-MMHCYAMLGKL 265
Query: 316 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
DK++++W+ + ++++ ++ + S +LG + + E + Q K +A
Sbjct: 266 DKVEEVWQQMD-QERRLPEGFFVMAIESLALLGQVTK-AEKVAQMKPTA 312
>gi|242078641|ref|XP_002444089.1| hypothetical protein SORBIDRAFT_07g007540 [Sorghum bicolor]
gi|241940439|gb|EES13584.1| hypothetical protein SORBIDRAFT_07g007540 [Sorghum bicolor]
Length = 942
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 95/210 (45%), Gaps = 11/210 (5%)
Query: 66 SLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDS 125
++P + + + +G+ A L +L K+ + A ++ +++ K+ +
Sbjct: 708 AIPVDELSRIFDEMIQQGHLANTVTLNVLLDIYGKAGLFNRAEKV--FIMARKQGLADII 765
Query: 126 DYATRIDLMTKVFGIHSGERYFE-----GLPLSAKTSETYTALLHLYAGAKWTEKAEELF 180
Y T I K HS + + G P+S E Y +L Y A E+ +
Sbjct: 766 SYNTIIAAYAKSGNFHSMNYFVQMMQDAGFPVS---PEAYNCMLDAYGKAGQLEEFASVL 822
Query: 181 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 240
+++K++ F+ YN M+ +Y G +E V+ V+ E+K + VVPD+++YN I +
Sbjct: 823 QKMKRAKCKFDHYTYNIMINIYGRRGWIEDVSNVLAELKDRGVVPDLYSYNTLIKAYGIA 882
Query: 241 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 270
+ K + EM G S D V Y NL+
Sbjct: 883 RMPEDAVKLMQEMRI-KGISPDRVTYANLI 911
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 120/279 (43%), Gaps = 7/279 (2%)
Query: 128 ATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELF-ERVK 184
T ID+ + + E + L SA + Y+ ++ +Y A+ E A + E K
Sbjct: 593 CTMIDVFSMMKRFADAEAIYLELKASASVLDMIAYSVIVRMYIKAQRLEDACSILAEMEK 652
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
Q + + ++ +M+ Y G +EK+A I++ V D YN I+ C + +D
Sbjct: 653 QKEIIPDKYLFLDMLRTYQKCGLLEKLADTYYWIRKSQVECDEAMYNCIINCCGRAIPVD 712
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 304
++ + DEM G + V L++IY A AE ++ ++ + I+Y+
Sbjct: 713 ELSRIFDEM-IQQGHLANTVTLNVLLDIYGKAGLFNRAEKVFIMARKQGLA--DIISYNT 769
Query: 305 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
+I YA GN ++ + ++ ++ Y C+L +Y G L+E ++ + K+ A
Sbjct: 770 IIAAYAKSGNFHSMNYFVQMMQDAGFPVSPEAYNCMLDAYGKAGQLEEFASVLQKMKR-A 828
Query: 365 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
FD N ++ + G E + L + P
Sbjct: 829 KCKFDHYTYNIMINIYGRRGWIEDVSNVLAELKDRGVVP 867
>gi|15218232|ref|NP_175000.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75268143|sp|Q9C545.1|PPR72_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g43010
gi|12321535|gb|AAG50822.1|AC026757_3 hypothetical protein [Arabidopsis thaliana]
gi|12323053|gb|AAG51513.1|AC068324_1 hypothetical protein [Arabidopsis thaliana]
gi|332193817|gb|AEE31938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 257
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 84/167 (50%), Gaps = 4/167 (2%)
Query: 58 LKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTH 117
L SRI K S ++++W +G + S LR ++K L + + ALE S+WM H
Sbjct: 38 LPSRIKTDINQKASIIPLLEQWRKQGYEVNPSHLRGLIKNLSDCKNFTTALEASKWMFKH 97
Query: 118 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYA-GAKWTEKA 176
F D A ++ L+ V G+ E+ F+ +P + Y+ LL Y + +KA
Sbjct: 98 SVFDNFPEDCAAQLHLVNTVLGLEEAEKMFKNIP---EKMRDYSVLLSSYTKPVRTVDKA 154
Query: 177 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNV 223
E F+++++ ++N M+ LY + +++ V ++ ++K+ N+
Sbjct: 155 EATFKKMRELGFLLKPYLFNSMICLYGQLQRLDMVEKLLYKLKKNNM 201
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/357 (19%), Positives = 154/357 (43%), Gaps = 37/357 (10%)
Query: 81 SEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGI 140
S+ ++ + S ++ ++ K LEI+ M+ + F + T + ++ +
Sbjct: 17 SDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARR-FSPDVITHNTILKAYCQIGDL 75
Query: 141 HSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMT 200
+F G + T+ TY L+H + ++A +L + + Q + +A +YN ++
Sbjct: 76 DRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIA 135
Query: 201 LYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGS 260
+G+++ V++ + ++ VPD+ TY I C T +D+ +K +++M +SG +
Sbjct: 136 GLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMK-ESGLT 194
Query: 261 DDWVKYVNLVNIYITASHL--VNAESSTLVEA---------------------------- 290
D V Y L+N + L V+ +VEA
Sbjct: 195 PDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKI 254
Query: 291 -EKSITQR---QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLM 346
EK I ++ +TY+ L+ + + D+ +++ + + + T Y ++ +
Sbjct: 255 LEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSR 314
Query: 347 LGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
L + +++ ++ S D+ N LL G E+A+E ++++K+CAP
Sbjct: 315 ADRLADAYRVMEDMFKAGISP-DLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAP 370
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/269 (17%), Positives = 114/269 (42%), Gaps = 11/269 (4%)
Query: 140 IHSGERYFEGLPLSAKTSET--YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 197
+ + E + S T +T Y ALL+ E+ +L E + ++ + YN
Sbjct: 178 LDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNT 237
Query: 198 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 257
++ G+ E+ ++E++ K PD+ TYN + +D+ ++ L++M
Sbjct: 238 VVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMV-GR 296
Query: 258 GGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 317
+ + Y L+ + A L +A + + K+ +TY+ L+ GL K
Sbjct: 297 RCAPTVITYTTLIGGFSRADRLADA-YRVMEDMFKAGISPDLVTYNCLL---DGLCKAGK 352
Query: 318 IDQIWKSLRMTKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 374
+++ + L + +K + + Y +++ LG + + +++ + ++ N
Sbjct: 353 LEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQP-NLVTFN 411
Query: 375 RLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
++ F G ++ ++ L+ + +C P
Sbjct: 412 TMIDGFCKAGKVDEGHKVLELMKEVSCTP 440
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 104/234 (44%), Gaps = 3/234 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY++++H A+ +KAE ++ + N YN ++ Y S GQ ++ V +E+
Sbjct: 256 TYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 315
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+R++++PD+ T+N+ + S I + + D M+ G + D Y ++N Y T
Sbjct: 316 RRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAM-KGQNPDVFSYNIMLNGYATKGC 374
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
LV+ + I T++ LI YA G DK I+ +R K Y
Sbjct: 375 LVDMTDLFDLMLGDGIAP-VICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYT 433
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
++++ +G + + E +Q + D A + L+ F G KA E
Sbjct: 434 TVIAALCRIGKMDDAMEKFNQMIDQGVAP-DKYAYHCLIQGFCTHGSLLKAKEL 486
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/294 (18%), Positives = 108/294 (36%), Gaps = 39/294 (13%)
Query: 148 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 207
+G + + TS TY L+ A E A F ++ ++ L + ++ N ++ + +
Sbjct: 102 QGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKR 161
Query: 208 V-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM------------- 253
E + +++ VPD+F+Y++ + S Q L M
Sbjct: 162 TDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVA 221
Query: 254 ----------------SCD-------SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 290
+CD G D+V Y ++V+ A + AE+
Sbjct: 222 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMV 281
Query: 291 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 350
K + W TY+ LI Y+ G + +++K +R + ++ S G +
Sbjct: 282 NKGVLPNNW-TYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKI 340
Query: 351 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 404
KE ++ D + D+ + N +L ++ G + L+L AP
Sbjct: 341 KEARDVFDTMAMKGQNP-DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPV 393
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 45/233 (19%), Positives = 99/233 (42%), Gaps = 5/233 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSN--LSFNALMYNEMMTLYMSVGQVEKVALVVE 216
+Y+ LL + +A++L + + S + + YN ++ + G V K + +
Sbjct: 184 SYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFK 243
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
E+ ++ + PD TY+ + + +D+ + FL +M ++W Y NL+ Y +
Sbjct: 244 EMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWT-YNNLIYGYSST 302
Query: 277 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 336
A E + +T++ L+ G + ++ ++ M Q +
Sbjct: 303 GQWKEA-VRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFS 361
Query: 337 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
Y +L+ Y G L ++ ++ D + I N L+ A+++ G+ +KA
Sbjct: 362 YNIMLNGYATKGCLVDMTDLFDLMLGDGIAPV-ICTFNVLIKAYANCGMLDKA 413
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 42/228 (18%), Positives = 99/228 (43%), Gaps = 11/228 (4%)
Query: 127 YATRIDL--MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVK 184
YAT+ L MT +F + G+ G+ A T+ L+ YA +KA +F ++
Sbjct: 369 YATKGCLVDMTDLFDLMLGD----GI---APVICTFNVLIKAYANCGMLDKAMIIFNEMR 421
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
+ N L Y ++ +G+++ ++ + V PD + Y+ I ++
Sbjct: 422 DHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLL 481
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 304
+ K+ + E+ ++G D V + +++N +++A++ + + + Y
Sbjct: 482 KAKELISEIM-NNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGL-HPTAVVYSM 539
Query: 305 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 352
L+ Y +G +K +++ ++ + Y +++ Y +G + E
Sbjct: 540 LMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDE 587
>gi|168002263|ref|XP_001753833.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694809|gb|EDQ81155.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 779
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/359 (20%), Positives = 143/359 (39%), Gaps = 41/359 (11%)
Query: 84 NQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSG 143
N+ T+++ I +E + ++ AL + ++M H+ ++ Y I +M + +
Sbjct: 34 NKLTINDFSLIFREFAQRSDWQKALRLFKYMQRHQWCKPNEHVYTIMIGIMGREGMLDKA 93
Query: 144 ERYFEGLPLSAKTSETY--TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTL 201
FE +PL+ Y TAL++ Y E + L R+K+ ++ N + YN ++
Sbjct: 94 SELFEDMPLNDVEWNVYSFTALINAYGRNGQHEASLHLLARMKREKVTPNLITYNTVINA 153
Query: 202 YMSVG-QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGS 260
G + E + + +++ + + PDI TYN +S+C++ +++ M+ ++G
Sbjct: 154 CAKGGLEWEGLLGLFAQMRHEGIQPDIITYNTLLSACSSRGLVEEAGMVFRTMN-EAGVV 212
Query: 261 DDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQ 320
D + Y LV+IY A L E E++ + Y+ LI Y G +
Sbjct: 213 PDSITYNALVDIYGQADRH-EGVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAK 271
Query: 321 IWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAF 380
++K ++ + +L +Y G EV + K+ T D++ N L+ F
Sbjct: 272 MFKQMQEAGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERGTEP-DVNTYNTLIQVF 330
Query: 381 SDVG-----------------------------------LTEKANEFHMLLLQKNCAPT 404
G L + A + H +LQ PT
Sbjct: 331 GQGGFFQESINLFWDLLDGGVEPDMSTYAGLLYSCGKGGLHKAAKKIHRHMLQSYVTPT 389
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/306 (19%), Positives = 131/306 (42%), Gaps = 21/306 (6%)
Query: 102 QRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYT 161
+ Y++ L I+++ + +EF SD+ + L +Y + YT
Sbjct: 30 EGYRNKLTINDFSLIFREFA-QRSDWQKALRLF----------KYMQRHQWCKPNEHVYT 78
Query: 162 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 221
++ + +KA ELFE + +++ +N + ++ Y GQ E ++ +KR+
Sbjct: 79 IMIGIMGREGMLDKASELFEDMPLNDVEWNVYSFTALINAYGRNGQHEASLHLLARMKRE 138
Query: 222 NVVPDIFTYNLWISSCA-ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLV 280
V P++ TYN I++CA L + + +M + G D + Y L++ ++ LV
Sbjct: 139 KVTPNLITYNTVINACAKGGLEWEGLLGLFAQMRHE-GIQPDIITYNTLLSA-CSSRGLV 196
Query: 281 NAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN---Y 337
++ ITY+ L+ +Y G D+ + + + LR +Q + + Y
Sbjct: 197 EEAGMVFRTMNEAGVVPDSITYNALVDIY---GQADRHEGVGELLREMEQAGNAPDVVAY 253
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 397
++ +Y G + ++ Q +++ + D+ + LL A+ G ++ +
Sbjct: 254 NILIEAYGRAGKYRAAAKMFKQMQEAGCTP-DVVTFSTLLEAYGKHGCYDEVRLLFTDMK 312
Query: 398 QKNCAP 403
++ P
Sbjct: 313 ERGTEP 318
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 58/285 (20%), Positives = 108/285 (37%), Gaps = 44/285 (15%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
S TY AL+ +Y A E EL ++Q+ + + + YN ++ Y G+ A + +
Sbjct: 215 SITYNALVDIYGQADRHEGVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFK 274
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY--- 273
+++ PD+ T++ + + D+V+ +M + G D Y L+ ++
Sbjct: 275 QMQEAGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMK-ERGTEPDVNTYNTLIQVFGQG 333
Query: 274 -----------------------ITASHLVNAESSTLVEAEKSITQRQWITY-----DFL 305
A L + L +A K I + +Y D
Sbjct: 334 GFFQESINLFWDLLDGGVEPDMSTYAGLLYSCGKGGLHKAAKKIHRHMLQSYVTPTTDGF 393
Query: 306 IILYAGLGNK---DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE----IID 358
L GN + + S++ + K Y ++ ++ G E G +ID
Sbjct: 394 TGLITAYGNAALYSEATYAFNSMKESGCKPDLETYNALIGAHAGGGLYCEAGSAYLTMID 453
Query: 359 QWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
+ + D+S N L+ AF GL + A EF + + C+P
Sbjct: 454 EGISA-----DVSTYNSLIEAFGRGGLFDDAIEFSRDMEEARCSP 493
>gi|224093190|ref|XP_002309826.1| predicted protein [Populus trichocarpa]
gi|222852729|gb|EEE90276.1| predicted protein [Populus trichocarpa]
Length = 1480
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 115/248 (46%), Gaps = 14/248 (5%)
Query: 85 QATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGE 144
Q T ++L ++K + + + + ALE+ EW+ + S A + + V G + E
Sbjct: 182 QMTPTDLCFVVKSVGQ-ESWHRALEVYEWLNLRHWY----SPNARMLSTILSVLGKANQE 236
Query: 145 R-----YFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMM 199
+ P + T + Y A++ +YA K +EL + +++ + + +N ++
Sbjct: 237 ALAVEVFMRAEPSAGNTVQVYNAMMGVYARRGRFNKVQELLDLMRERGCKPDLVSFNTLI 296
Query: 200 TLYMSVG-QVEKVAL-VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 257
+ G + +A+ ++ E++R + PD TYN IS+C+ N+++ K D+M
Sbjct: 297 NARLKAGAMMPNLAIELLNEVRRSGLRPDTITYNTLISACSRASNLEEAAKVFDDMEAHH 356
Query: 258 GGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 317
D W Y ++++Y AE + E ++Y+ L+ +A GN +K
Sbjct: 357 CQPDLWT-YNAMISVYGRCGLSGKAE-QLFNDLESRGFFPDAVSYNSLLYAFAREGNVEK 414
Query: 318 IDQIWKSL 325
+ +IW+ +
Sbjct: 415 VKEIWEEM 422
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 98/219 (44%), Gaps = 11/219 (5%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
+ ++L +Y + K ++++R+K+ L + YN ++ +Y + E+ ++ E++
Sbjct: 956 WNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRDHRPEEGFSLMHEMR 1015
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
+ P + TY ++S ++Q ++ +E+ G D Y ++ IY +
Sbjct: 1016 VAGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQ-SKGCKLDRSFYHTMMKIYRNSGSH 1074
Query: 280 VNAES--STLVEA--EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
AE S + +A E +I T L++ Y G + +++ +L+ T +++
Sbjct: 1075 SKAERLFSMMKDAGVEPTIA-----TMHLLMVSYGSSGQPQEAEKVLSNLKETGSNLSTL 1129
Query: 336 NYICILSSYLMLGHLK-EVGEIIDQWKQSATSDFDISAC 373
Y ++ +YL G + ++I K+ D I C
Sbjct: 1130 PYSSVIDAYLRNGDYNIGIQKLIQMKKEGLEPDHRIWTC 1168
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 90/204 (44%), Gaps = 10/204 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+ + A E+A ++F+ ++ + + YN M+++Y G K + ++
Sbjct: 328 TYNTLISACSRASNLEEAAKVFDDMEAHHCQPDLWTYNAMISVYGRCGLSGKAEQLFNDL 387
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + PD +YN + + A N+++VK+ +EM G D+ + Y ++++Y
Sbjct: 388 ESRGFFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDE-MTYNTMIHMYGKQGQ 446
Query: 279 LVNAESSTLV-EAEKSITQRQWITYDFLIILYAGLGNKDKIDQ---IWKSLRMTKQKMTS 334
N + L + + S +TY LI LG +KI + + + T K T
Sbjct: 447 --NELALQLYRDMQSSGRNPDAVTYTVLI---DSLGKTNKIAEAAGVMSEMLNTGVKPTL 501
Query: 335 RNYICILSSYLMLGHLKEVGEIID 358
+ Y ++ Y G E E D
Sbjct: 502 KTYSALICGYAKAGKPVEAEETFD 525
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
+TY +L+ + + E+AEELFE ++ + Y+ MM +Y + G K +
Sbjct: 1024 DTYKSLVASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTMMKIYRNSGSHSKAERLFSM 1083
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274
+K V P I T +L + S ++ + +K L + ++G + + Y ++++ Y+
Sbjct: 1084 MKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLK-ETGSNLSTLPYSSVIDAYL 1139
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 101/241 (41%), Gaps = 9/241 (3%)
Query: 166 LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVP 225
L AGA A EL V++S L + + YN +++ +E+ A V ++++ + P
Sbjct: 300 LKAGAMMPNLAIELLNEVRRSGLRPDTITYNTLISACSRASNLEEAAKVFDDMEAHHCQP 359
Query: 226 DIFTYNLWIS---SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 282
D++TYN IS C + +Q+ L+ G D V Y +L+ + + V
Sbjct: 360 DLWTYNAMISVYGRCGLSGKAEQLFNDLE----SRGFFPDAVSYNSLLYAFAREGN-VEK 414
Query: 283 ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILS 342
E K + +TY+ +I +Y G + Q+++ ++ + + + Y ++
Sbjct: 415 VKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQNELALQLYRDMQSSGRNPDAVTYTVLID 474
Query: 343 SYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCA 402
S + E ++ + + + + L+ ++ G +A E +L+
Sbjct: 475 SLGKTNKIAEAAGVMSEMLNTGVKP-TLKTYSALICGYAKAGKPVEAEETFDCMLRSGIR 533
Query: 403 P 403
P
Sbjct: 534 P 534
>gi|297736301|emb|CBI24939.3| unnamed protein product [Vitis vinifera]
Length = 485
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 149/378 (39%), Gaps = 55/378 (14%)
Query: 36 SSGSSQNECLDEETSNSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATV--SELRH 93
SSGSSQN K DL SRI R +A + I+R + +T+ +
Sbjct: 49 SSGSSQNGL------QRQPKKDL-SRILRT----EAAISGIERKANSRKYSTLWPKAVLE 97
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLS 153
L E + RY+ AL K+FG+ + ++E
Sbjct: 98 ALDEAIRENRYESAL---------------------------KIFGLLRKQHWYE----- 125
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
+TYT LL + K E+A LFE + L +Y +++ Y GQ++K
Sbjct: 126 -PRCQTYTKLLMMLGKCKQPEQASLLFEVMLSEGLRPTLDVYTALVSAYGHSGQLDKAFC 184
Query: 214 VVEEIKR-KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 272
VE++K + PD++TY++ I C D +++ EMS G V Y +++
Sbjct: 185 TVEDMKSVSDCKPDVYTYSILIKCCTTLGRFDLIERIFTEMS-YLGIECSTVTYNTIIDG 243
Query: 273 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 332
Y A ESS E T + I Y G +K+++ + ++ +
Sbjct: 244 YGKADMFELMESSLTEMIESGTCLPDIFTLNSFIWAYGNSGQIEKMEKWYDEFQLMGIRP 303
Query: 333 TSRNYICILSSY---LMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
+ + ++ SY M + V E + + S T I N ++ F VG EK
Sbjct: 304 DIKTFNILIRSYGKACMYEKMVSVMEFMKKRFYSPT----IVTFNIVIEMFGRVGNIEKM 359
Query: 390 NEFHMLLLQKNCAPTNAS 407
EF + + + P + +
Sbjct: 360 EEFFLKMKHQGVKPNSIT 377
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 115/250 (46%), Gaps = 4/250 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV-ALVVEE 217
TY+ L+ + E +F + + + + YN ++ Y E + + + E
Sbjct: 201 TYSILIKCCTTLGRFDLIERIFTEMSYLGIECSTVTYNTIIDGYGKADMFELMESSLTEM 260
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
I+ +PDIFT N +I + + I++++K+ DE D +K N++ +
Sbjct: 261 IESGTCLPDIFTLNSFIWAYGNSGQIEKMEKWYDEFQLMGIRPD--IKTFNILIRSYGKA 318
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
+ S + +K +T++ +I ++ +GN +K+++ + ++ K S Y
Sbjct: 319 CMYEKMVSVMEFMKKRFYSPTIVTFNIVIEMFGRVGNIEKMEEFFLKMKHQGVKPNSITY 378
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 397
++S+Y G+LK+V I+ Q + S + D N +L A+ G E+ E +++
Sbjct: 379 CSLVSAYSKAGYLKKVDSILRQIENSDVT-LDTPFFNCVLSAYGQAGDVERMGELFLVMK 437
Query: 398 QKNCAPTNAS 407
++ C P N +
Sbjct: 438 ERKCKPDNIT 447
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/167 (17%), Positives = 77/167 (46%), Gaps = 7/167 (4%)
Query: 76 IQRWVSE----GNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
+++W E G + + +++ K+ Y+ + + E+M + + + + I
Sbjct: 289 MEKWYDEFQLMGIRPDIKTFNILIRSYGKACMYEKMVSVMEFM-KKRFYSPTIVTFNIVI 347
Query: 132 DLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLS 189
++ +V I E +F + S TY +L+ Y+ A + +K + + +++ S+++
Sbjct: 348 EMFGRVGNIEKMEEFFLKMKHQGVKPNSITYCSLVSAYSKAGYLKKVDSILRQIENSDVT 407
Query: 190 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 236
+ +N +++ Y G VE++ + +K + PD T+ I +
Sbjct: 408 LDTPFFNCVLSAYGQAGDVERMGELFLVMKERKCKPDNITFATMIQA 454
>gi|359487410|ref|XP_002273156.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Vitis vinifera]
Length = 538
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 147/374 (39%), Gaps = 55/374 (14%)
Query: 36 SSGSSQNECLDEETSNSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATV--SELRH 93
SSGSSQN K DL SRI R +A + I+R + +T+ +
Sbjct: 49 SSGSSQN------GLQRQPKKDL-SRILRT----EAAISGIERKANSRKYSTLWPKAVLE 97
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLS 153
L E + RY+ AL K+FG+ + ++E
Sbjct: 98 ALDEAIRENRYESAL---------------------------KIFGLLRKQHWYE----- 125
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
+TYT LL + K E+A LFE + L +Y +++ Y GQ++K
Sbjct: 126 -PRCQTYTKLLMMLGKCKQPEQASLLFEVMLSEGLRPTLDVYTALVSAYGHSGQLDKAFC 184
Query: 214 VVEEIKR-KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 272
VE++K + PD++TY++ I C D +++ EMS G V Y +++
Sbjct: 185 TVEDMKSVSDCKPDVYTYSILIKCCTTLGRFDLIERIFTEMS-YLGIECSTVTYNTIIDG 243
Query: 273 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 332
Y A ESS E T + I Y G +K+++ + ++ +
Sbjct: 244 YGKADMFELMESSLTEMIESGTCLPDIFTLNSFIWAYGNSGQIEKMEKWYDEFQLMGIRP 303
Query: 333 TSRNYICILSSY---LMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
+ + ++ SY M + V E + + S T I N ++ F VG EK
Sbjct: 304 DIKTFNILIRSYGKACMYEKMVSVMEFMKKRFYSPT----IVTFNIVIEMFGRVGNIEKM 359
Query: 390 NEFHMLLLQKNCAP 403
EF + + + P
Sbjct: 360 EEFFLKMKHQGVKP 373
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 115/250 (46%), Gaps = 4/250 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV-ALVVEE 217
TY+ L+ + E +F + + + + YN ++ Y E + + + E
Sbjct: 201 TYSILIKCCTTLGRFDLIERIFTEMSYLGIECSTVTYNTIIDGYGKADMFELMESSLTEM 260
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
I+ +PDIFT N +I + + I++++K+ DE D +K N++ +
Sbjct: 261 IESGTCLPDIFTLNSFIWAYGNSGQIEKMEKWYDEFQLMGIRPD--IKTFNILIRSYGKA 318
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
+ S + +K +T++ +I ++ +GN +K+++ + ++ K S Y
Sbjct: 319 CMYEKMVSVMEFMKKRFYSPTIVTFNIVIEMFGRVGNIEKMEEFFLKMKHQGVKPNSITY 378
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 397
++S+Y G+LK+V I+ Q + S + D N +L A+ G E+ E +++
Sbjct: 379 CSLVSAYSKAGYLKKVDSILRQIENSDVT-LDTPFFNCVLSAYGQAGDVERMGELFLVMK 437
Query: 398 QKNCAPTNAS 407
++ C P N +
Sbjct: 438 ERKCKPDNIT 447
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/167 (17%), Positives = 77/167 (46%), Gaps = 7/167 (4%)
Query: 76 IQRWVSE----GNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
+++W E G + + +++ K+ Y+ + + E+M + + + + I
Sbjct: 289 MEKWYDEFQLMGIRPDIKTFNILIRSYGKACMYEKMVSVMEFM-KKRFYSPTIVTFNIVI 347
Query: 132 DLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLS 189
++ +V I E +F + S TY +L+ Y+ A + +K + + +++ S+++
Sbjct: 348 EMFGRVGNIEKMEEFFLKMKHQGVKPNSITYCSLVSAYSKAGYLKKVDSILRQIENSDVT 407
Query: 190 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 236
+ +N +++ Y G VE++ + +K + PD T+ I +
Sbjct: 408 LDTPFFNCVLSAYGQAGDVERMGELFLVMKERKCKPDNITFATMIQA 454
>gi|357481229|ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512235|gb|AES93858.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1508
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 2/198 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY A++ +Y + KAE LFE++K + S +A+ YN ++ + G EKV + EE+
Sbjct: 373 TYNAMISVYGRCGFALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEM 432
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ D TYN I D+ + +M SG + D V Y L+++ AS
Sbjct: 433 VKMGFGKDEMTYNTIIHMYGKHGRHDEALRLYRDMK-SSGRNPDAVTYTVLIDLLGKASK 491
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ A S + E + + TY LI YA +G + + ++ + +R + K Y
Sbjct: 492 IEEA-SKVMSEMLDAGVKPTLHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHLAYS 550
Query: 339 CILSSYLMLGHLKEVGEI 356
+L +L +K+ +
Sbjct: 551 VMLDFFLRFNEIKKAAAL 568
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 115/240 (47%), Gaps = 10/240 (4%)
Query: 87 TVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVF--GIHSGE 144
T ++ ++K + +S ++ ALE+ E + + + + AT + ++ K GI + E
Sbjct: 194 TPTDFCFVVKSVGQSS-WQRALELYECLTMQQWYATNARMVATILSVLGKANQEGI-AVE 251
Query: 145 RYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM- 203
+ + + A T + Y A++ +YA EK E+F +++ + + +N ++ +
Sbjct: 252 IFAKAESVIADTVQVYNAMMGVYARNGNFEKVNEMFNLMRERGCEPDIVSFNTLINAKVK 311
Query: 204 SVGQVEKVAL-VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 262
S V +A+ +++E+ + + PDI TYN IS+C+ N+ + M + D
Sbjct: 312 SCATVSGLAIELLDEVGKFGLRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDL 371
Query: 263 WVKYVNLVNIYITASHLVNAESSTLVEAEKSIT-QRQWITYDFLIILYAGLGNKDKIDQI 321
W Y ++++Y + AE L E KS +TY+ L+ ++ GN +K+ I
Sbjct: 372 WT-YNAMISVYGRCGFALKAEH--LFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDI 428
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 107/243 (44%), Gaps = 17/243 (6%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
+ + ++L LY+ + + +++ ++ + L+ + YN ++T+Y + E+ ++ +
Sbjct: 965 QIFNSVLKLYSSIEEFQNMGVIYQMIQDAGLAPDEETYNTLITMYCRDHRPEEGLSLMHK 1024
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
+K + P TY I++ + DQ ++ +E+ + G D Y ++ +Y T+
Sbjct: 1025 MKSLGLEPKRDTYRSMIAAFSKQQLYDQAEELFEELRSN-GYKLDRSFYHLMMKMYRTSG 1083
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
AE+ + E I + T L++ Y G ++ D+I K+LR + + Y
Sbjct: 1084 DHQKAENLLEIMKEAGI-EPNTATMHLLMVSYGKSGQPEEADRILKNLRTMGAVLDTLPY 1142
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSAT-SDFDISAC--------------NRLLGAFSD 382
++ +YL G K E + + K++A D I C N LL A
Sbjct: 1143 SSVIDAYLKKGDAKAGIEKLTEMKEAAIEPDHRIWTCFIRAASLSGEVNDANNLLNALQA 1202
Query: 383 VGL 385
VG
Sbjct: 1203 VGF 1205
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 2/112 (1%)
Query: 127 YATRIDLMTKVFGIHSGERYF-EGLPLSAK-TSETYTALLHLYAGAKWTEKAEELFERVK 184
Y IDL+ K I + E L K T TY+AL+ YA +AEE F R++
Sbjct: 479 YTVLIDLLGKASKIEEASKVMSEMLDAGVKPTLHTYSALICAYAKVGRRVEAEETFNRMR 538
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 236
+S + + L Y+ M+ ++ +++K A + +E+ PD Y + + +
Sbjct: 539 ESGIKADHLAYSVMLDFFLRFNEIKKAAALYQEMIEAGFTPDTGLYEVMLPA 590
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 91/210 (43%), Gaps = 10/210 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+ + ++A +F ++ + + YN M+++Y G K + E++
Sbjct: 338 TYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMISVYGRCGFALKAEHLFEKL 397
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K PD TYN + + + N ++V+ +EM G D + Y ++++Y H
Sbjct: 398 KSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEM-VKMGFGKDEMTYNTIIHMY--GKH 454
Query: 279 LVNAESSTLVEAEKSITQRQ-WITYDFLIILYAGLGNKDKIDQIWKSLRM---TKQKMTS 334
+ E+ L KS + +TY LI L LG KI++ K + K T
Sbjct: 455 GRHDEALRLYRDMKSSGRNPDAVTYTVLIDL---LGKASKIEEASKVMSEMLDAGVKPTL 511
Query: 335 RNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
Y ++ +Y +G E E ++ ++S
Sbjct: 512 HTYSALICAYAKVGRRVEAEETFNRMRESG 541
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 58/121 (47%), Gaps = 1/121 (0%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
K TY ++H+Y ++A L+ +K S + +A+ Y ++ L ++E+ +
Sbjct: 438 GKDEMTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEASK 497
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
V+ E+ V P + TY+ I + A + ++ + M +SG D + Y +++ +
Sbjct: 498 VMSEMLDAGVKPTLHTYSALICAYAKVGRRVEAEETFNRMR-ESGIKADHLAYSVMLDFF 556
Query: 274 I 274
+
Sbjct: 557 L 557
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 104/238 (43%), Gaps = 11/238 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY AL+ Y + +A ELF R+ + L + L YN ++ Y V++ ++ +E+
Sbjct: 302 TYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKEL 361
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
KN+VP I +YN I + I VKK LDEM S D V Y L++
Sbjct: 362 CNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMH-GSAQPPDVVTYNILIDALCKEGR 420
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR--N 336
++ A LV K + +TY+ ++ Y N + I+ RM K + N
Sbjct: 421 ILEA-LGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFN--RMVKSGLEPDILN 477
Query: 337 YICILSSYLMLGHLKEVGEIIDQWKQSATSDF--DISACNRLLGAFSDVGLTEKANEF 392
Y +++ Y + V E I +K+ + DI++ N L+ ++G E
Sbjct: 478 YNVLINGYC---KTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQEL 532
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 105/244 (43%), Gaps = 3/244 (1%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y+AL+ + A L ++ + + +A+ YN ++ SVG+ ++V ++ ++
Sbjct: 198 YSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMV 257
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
R+NV PD +T+N+ I + I + + L MS G D V Y L+ Y + +
Sbjct: 258 RENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS-KRGEKPDIVTYNALMEGYCSREN- 315
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 339
V+ K + + Y+ LI Y D+ ++K L T +Y
Sbjct: 316 VHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNS 375
Query: 340 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 399
++ G + V +++D+ SA D+ N L+ A G +A +++++K
Sbjct: 376 LIDGLCNSGRISHVKKLLDEMHGSAQPP-DVVTYNILIDALCKEGRILEALGVLVMMMKK 434
Query: 400 NCAP 403
P
Sbjct: 435 GVKP 438
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 44/86 (51%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y L++ Y + ++A LF+ ++ NL + YN ++ ++G++ V +++E+
Sbjct: 478 YNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMC 537
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQ 245
PD+ TYN+ + + T D+
Sbjct: 538 DSGQSPDVITYNILLDAFCKTQPFDK 563
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 82/188 (43%), Gaps = 6/188 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L++ + + A L + +++S++ N +MY+ ++ G V + +I
Sbjct: 162 TYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQI 221
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ ++ D TYN I C + +V + L +M ++ DD+ + L++
Sbjct: 222 GERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI-LIDALCKEGR 280
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR--N 336
++ A+ L K + +TY+ L+ Y N + +++ RM K+ + N
Sbjct: 281 ILEAQ-GVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFN--RMVKRGLEPDVLN 337
Query: 337 YICILSSY 344
Y ++ Y
Sbjct: 338 YNVLIDGY 345
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 91/236 (38%), Gaps = 38/236 (16%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
T +Y +L+ + ++L + + S + + YN ++ G++ +
Sbjct: 367 VPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALG 426
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
V+ + +K V P+I TYN + N++ K + M SG D + Y L+N Y
Sbjct: 427 VLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMV-KSGLEPDILNYNVLINGY 485
Query: 274 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
++ + EA I+L+ + +K+ I I
Sbjct: 486 --------CKTEMVDEA---------------IVLFKEMRHKNLIPDIA----------- 511
Query: 334 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
+Y ++ LG + V E++D+ S S D+ N LL AF +KA
Sbjct: 512 --SYNSLIDGLCNLGRIPHVQELLDEMCDSGQSP-DVITYNILLDAFCKTQPFDKA 564
>gi|297832604|ref|XP_002884184.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330024|gb|EFH60443.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 829
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 151/338 (44%), Gaps = 35/338 (10%)
Query: 89 SELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRID-----LMTKVFGIHS- 142
++L ++K L S ++ A+ + EW+V LS + A ++D ++ ++ G S
Sbjct: 144 TDLVSLVKGLDDSGHWERAVFLFEWLV------LSSNSGALKLDHHVIEILVRILGRESQ 197
Query: 143 ---GERYFEGLPLSAKTSET--YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 197
+ + +PL + YT +LH Y+ EKA LFER+K+ S + YN
Sbjct: 198 YSVAAKLLDKIPLQDYMLDVRAYTTILHAYSRTGKYEKAINLFERMKEMGPSPTLVTYNV 257
Query: 198 MMTLYMSVGQV-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM-SC 255
++ ++ +G+ K+ V+EE++ K + D FT + +S+CA + + K F E+ SC
Sbjct: 258 ILDVFGKMGRSWRKILGVLEEMRSKGLKFDEFTCSTVLSACAREGLLREAKDFFAELKSC 317
Query: 256 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 315
G V Y L+ ++ A A S L E E++ +TY+ L+ YA G
Sbjct: 318 --GYEPGTVTYNALLQVFGKAGVYTEA-LSVLKEMEENNCPADSVTYNELVAAYARAGFS 374
Query: 316 DKIDQIWKSLRMTKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA 372
+ + + M QK N Y ++ +Y G E ++ K++ +
Sbjct: 375 KEAAVV---IEMMTQKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVP-NTCT 430
Query: 373 CNRLLGAFSDVGLTEKANEFHMLLL---QKNCAPTNAS 407
N +L S +G ++NE +L C P A+
Sbjct: 431 YNAVL---SMLGKKSRSNEMIKMLCDMKSNGCFPNRAT 465
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 54/98 (55%), Gaps = 4/98 (4%)
Query: 159 TYTALLHLYA--GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
TY +L+ +Y G W KAEE+ + +++S L + + YN ++ + G +++ ++
Sbjct: 675 TYNSLMDMYVRRGECW--KAEEILKTLEKSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLS 732
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 254
E+ + + P IFTYN ++S A +++ ++ M+
Sbjct: 733 EMTERGIRPCIFTYNTFVSGYTAMGMYGEIEDVIECMA 770
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/95 (18%), Positives = 49/95 (51%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
+ ++L ++ ++AE + + + + L+ + + YN +M +Y+ G+ K +++ ++
Sbjct: 641 FNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAEEILKTLE 700
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 254
+ + PD+ +YN I + + + L EM+
Sbjct: 701 KSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLSEMT 735
>gi|357449339|ref|XP_003594946.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359380|gb|ABN05846.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483994|gb|AES65197.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 143/314 (45%), Gaps = 16/314 (5%)
Query: 59 KSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWM---V 115
KS+ + S ++I+ + S + S++ +LK L S ++ A + EW+
Sbjct: 134 KSKFMLNCIVGSSLNDLIEFFNSVKGELLESDITGLLKGLDLSGNWERAFLLFEWVWLNF 193
Query: 116 THKEFVLSDSDYATRIDLMTKVFGIHS----GERYFEGLPLSAKTSET--YTALLHLYAG 169
+ + D ++ M K+ G S + F+ +P+ + + T +LH YA
Sbjct: 194 GSENMKVDDQS----VEFMVKMLGRESQYSIASKLFDIIPVEEYSLDVKACTTVLHAYAR 249
Query: 170 AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL-VVEEIKRKNVVPDIF 228
++A E+FE++K++ L + YN M+ +Y +G+ + L +++E++ K + D F
Sbjct: 250 TGKYKRAIEIFEKMKETGLDPTLVTYNVMLDVYGKMGRAWSMILELLDEMRSKGLEFDEF 309
Query: 229 TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV 288
T IS+C +D+ ++F D++ + G Y +++ ++ A A + L
Sbjct: 310 TCTTVISACGREGILDEARRFFDDLKLN-GYKPGTATYNSMLQVFGKAGVYTEA-LNILK 367
Query: 289 EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLG 348
E E + + ITY+ L+ Y G D+ + ++ + Y ++++Y G
Sbjct: 368 EMEDNNCEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKGVMPNAITYTTVINAYGKAG 427
Query: 349 HLKEVGEIIDQWKQ 362
+ E+ Q K+
Sbjct: 428 DADKALEVFGQMKE 441
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/265 (18%), Positives = 117/265 (44%), Gaps = 5/265 (1%)
Query: 145 RYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY 202
R+F+ L L+ + TY ++L ++ A +A + + ++ +N +A+ YNE++ Y
Sbjct: 329 RFFDDLKLNGYKPGTATYNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNELVAAY 388
Query: 203 MSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 262
+ G ++ A V++ + K V+P+ TY I++ + D+ + +M + G +
Sbjct: 389 VRAGFHDEGAAVIDTMASKGVMPNAITYTTVINAYGKAGDADKALEVFGQMK-ELGCVPN 447
Query: 263 WVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 322
Y N++ + + L + + + IT++ ++ + G + + Q+
Sbjct: 448 VCTYNNVL-VLLGKRSRSEDMIKILCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQVL 506
Query: 323 KSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSD 382
+ ++ + + ++S+Y G +V ++ + + + I+ N LL A +
Sbjct: 507 REMKNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPC-ITTYNALLNALAR 565
Query: 383 VGLTEKANEFHMLLLQKNCAPTNAS 407
G + A + + +K P S
Sbjct: 566 RGNWKAAESVVLDMRKKGFKPNETS 590
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 48/96 (50%)
Query: 162 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 221
++L ++ + EKA E+ + + S L N + YN ++ LY VG K ++++I+
Sbjct: 663 SMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNS 722
Query: 222 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 257
+ PD+ +YN I + + + L EM+ +
Sbjct: 723 GISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTANG 758
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 3/100 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +L+ LYA KAEE+ + ++ S +S + + YN ++ + G V++ ++ E+
Sbjct: 695 TYNSLIDLYARVGDCWKAEEMLKDIQNSGISPDVVSYNTVIKGFCKKGLVQEAIRILSEM 754
Query: 219 KRKNVVPDIFTYNLWISSCAAT---LNIDQVKKFLDEMSC 255
V P T+N ++S A D+V +++ E C
Sbjct: 755 TANGVQPCPITFNTFMSCYAGNGLFAEADEVIRYMIEHGC 794
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 104/245 (42%), Gaps = 3/245 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY ALL+ A + AE + +++ N Y+ ++ Y G V + V EI
Sbjct: 555 TYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLLHCYSKAGNVRGLEKVEMEI 614
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+V P + + + +++ ++ ++G D V +++++++
Sbjct: 615 YDGHVFPSWMLLRTLVLTNYKCRQLKGMERAFHQLQ-NNGYKLDMVVINSMLSMFVRNQK 673
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L A L S Q +TY+ LI LYA +G+ K +++ K ++ + +Y
Sbjct: 674 LEKAH-EMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNSGISPDVVSYN 732
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
++ + G ++E I+ + + I+ N + ++ GL +A+E +++
Sbjct: 733 TVIKGFCKKGLVQEAIRILSEMTANGVQPCPITF-NTFMSCYAGNGLFAEADEVIRYMIE 791
Query: 399 KNCAP 403
C P
Sbjct: 792 HGCMP 796
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 89/200 (44%), Gaps = 3/200 (1%)
Query: 177 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 236
E F +++ + + ++ N M+++++ ++EK +++ I + P++ TYN I
Sbjct: 643 ERAFHQLQNNGYKLDMVVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDL 702
Query: 237 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 296
A + + ++ L ++ +SG S D V Y ++ + LV L E + Q
Sbjct: 703 YARVGDCWKAEEMLKDIQ-NSGISPDVVSYNTVIKGFCKKG-LVQEAIRILSEMTANGVQ 760
Query: 297 RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 356
IT++ + YAG G + D++ + + Y ++ Y+ KE +
Sbjct: 761 PCPITFNTFMSCYAGNGLFAEADEVIRYMIEHGCMPNELTYKIVIDGYIKAKKHKEAMDF 820
Query: 357 IDQWKQSATSDFDISACNRL 376
+ + K+ S FD + +L
Sbjct: 821 VSKIKEIDIS-FDDQSLKKL 839
>gi|302753488|ref|XP_002960168.1| hypothetical protein SELMODRAFT_402234 [Selaginella moellendorffii]
gi|300171107|gb|EFJ37707.1| hypothetical protein SELMODRAFT_402234 [Selaginella moellendorffii]
Length = 585
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 151/331 (45%), Gaps = 22/331 (6%)
Query: 67 LPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSD 126
+P ++ I V G + + I+++L K Q+YK AL+ K F + D D
Sbjct: 67 VPGHRVSSYINWLVDMGEIDSKPMVLSIIRKLTKRQKYKTALD--------KAFEIDDRD 118
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQS 186
Y ++D V ++ E F LP KT E Y +L + + EKA + +++++
Sbjct: 119 YVLQVDYYAHV-DMYLAEMAFNRLPDDKKTEEAYNYILAGFVRNRMLEKAVVVMDKIREL 177
Query: 187 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNV--VPDIFTYNLWISSCAATLNID 244
L +A +M L+ +G ++ +V E + + P +LWI L+
Sbjct: 178 GL-VSAFSLEQMTLLFHYLGLERRIPALVVEARSLGLHFHPHFLNTHLWIKRRHGDLS-- 234
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT----QRQWI 300
+++ ++E+ G S+ W Y+ + + YI A L + L AE I ++Q
Sbjct: 235 GMEEIVEELEL-MGRSNAWT-YIFIASAYIQAG-LPEKAHAALGAAEAGIRNGRFKKQRK 291
Query: 301 TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW 360
Y+ +++LY L + + I+++W L ++ + N++ ++ + G++ EI ++
Sbjct: 292 VYNKILLLYGLLKDTEGIERVWGILN-SRPLVAVHNHLFMIEALGSAGNIGRAEEIFEEL 350
Query: 361 KQSATSDFDISACNRLLGAFSDVGLTEKANE 391
++ + + GA++ GL +KA E
Sbjct: 351 RKCRGVRKEYRQFIVMAGAYTKNGLMDKATE 381
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 109/250 (43%), Gaps = 12/250 (4%)
Query: 159 TYTALLH-LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
TY+ ++ L K TE E LF ++ + S N + YN ++ +E+ ++EE
Sbjct: 115 TYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEE 174
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
+ K VPD TYN +S + + K+F D M G S D V Y L++
Sbjct: 175 MASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMP-SRGYSPDVVAYNGLLDALYK-- 231
Query: 278 HLVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
++ ++ K + + + +TY+ +++ A N D+ ++++K + +
Sbjct: 232 ---EGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPN 288
Query: 334 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 393
Y +LS + + + +++++ + D+ N LL L +KA+E
Sbjct: 289 GATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVP-DVVTYNILLDGLCKTNLVDKAHELF 347
Query: 394 MLLLQKNCAP 403
++ CAP
Sbjct: 348 STMVDNGCAP 357
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 62/135 (45%), Gaps = 1/135 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY LL +KA ELF + + + + + Y+ ++ +V ++ + +
Sbjct: 326 TYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRM 385
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ +VPD+ T+N+ + +D+ K LD+M+C SG + D+V Y L+N
Sbjct: 386 IERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTC-SGCAPDYVAYNTLMNGLRKQGR 444
Query: 279 LVNAESSTLVEAEKS 293
+ A+ T EK
Sbjct: 445 HIQADRLTQAMKEKG 459
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 105/252 (41%), Gaps = 16/252 (6%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+ +L + +LFE++ + +S + + YN ++ Y G+V++ + EE+
Sbjct: 10 TFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEM 69
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ P I+TYN +++ + + + M+ + G D V Y +++
Sbjct: 70 VSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMA-EKGFEPDVVTYSTIISGLCKTGK 128
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ A + + + Y+ LI GL + I++ +K L ++M S+ Y+
Sbjct: 129 VTEALEMLFHKMIERGCSANTVAYNALI---NGLCKDENIERAYKLL----EEMASKGYV 181
Query: 339 -------CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 391
ILS +G + E + D S D+ A N LL A G T++A +
Sbjct: 182 PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSP-DVVAYNGLLDALYKEGKTDEAMK 240
Query: 392 FHMLLLQKNCAP 403
++ K P
Sbjct: 241 LFKDVIAKGYMP 252
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 104/238 (43%), Gaps = 11/238 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY AL+ Y + +A ELF R+ + L + L YN ++ Y V++ ++ +E+
Sbjct: 302 TYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKEL 361
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
KN+VP I +YN I + I VKK LDEM S D V Y L++
Sbjct: 362 CNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMH-GSAQPPDVVTYNILIDALCKEGR 420
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR--N 336
++ A LV K + +TY+ ++ Y N + I+ RM K + N
Sbjct: 421 ILEA-LGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFN--RMVKSGLEPDILN 477
Query: 337 YICILSSYLMLGHLKEVGEIIDQWKQSATSDF--DISACNRLLGAFSDVGLTEKANEF 392
Y +++ Y + V E I +K+ + DI++ N L+ ++G E
Sbjct: 478 YNVLINGYC---KTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQEL 532
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 105/244 (43%), Gaps = 3/244 (1%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y+AL+ + A L ++ + + +A+ YN ++ SVG+ ++V ++ ++
Sbjct: 198 YSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMV 257
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
R+NV PD +T+N+ I + I + + L MS G D V Y L+ Y + +
Sbjct: 258 RENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS-KRGEKPDIVTYNALMEGYCSREN- 315
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 339
V+ K + + Y+ LI Y D+ ++K L T +Y
Sbjct: 316 VHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNS 375
Query: 340 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 399
++ G + V +++D+ SA D+ N L+ A G +A +++++K
Sbjct: 376 LIDGLCNSGRISHVKKLLDEMHGSAQPP-DVVTYNILIDALCKEGRILEALGVLVMMMKK 434
Query: 400 NCAP 403
P
Sbjct: 435 GVKP 438
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 44/86 (51%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y L++ Y + ++A LF+ ++ NL + YN ++ ++G++ V +++E+
Sbjct: 478 YNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMC 537
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQ 245
PD+ TYN+ + + T D+
Sbjct: 538 DSGQSPDVITYNILLDAFCKTQPFDK 563
Score = 38.1 bits (87), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 82/188 (43%), Gaps = 6/188 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L++ + + A L + +++S++ N +MY+ ++ G V + +I
Sbjct: 162 TYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQI 221
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ ++ D TYN I C + +V + L +M ++ DD+ + L++
Sbjct: 222 GERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI-LIDALCKEGR 280
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR--N 336
++ A+ L K + +TY+ L+ Y N + +++ RM K+ + N
Sbjct: 281 ILEAQ-GVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFN--RMVKRGLEPDVLN 337
Query: 337 YICILSSY 344
Y ++ Y
Sbjct: 338 YNVLIDGY 345
>gi|356556194|ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 829
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 143/331 (43%), Gaps = 20/331 (6%)
Query: 89 SELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRID-----LMTKVFGIHS- 142
++ +LK L S ++ AL + EW H SD R+D LM ++ G S
Sbjct: 141 ADFPSLLKALDLSGNWERALLLFEWGWLH-----FGSDQNLRLDNQVVELMVRILGRESQ 195
Query: 143 ---GERYFEGLPLSAKTSET--YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 197
+ F+ +P+ + + YT +LH YA ++A +LF ++K+ L + YN
Sbjct: 196 HSIASKLFDLIPVEKYSLDVRAYTTILHSYARTGKYKRAIDLFGKMKEIGLDPTLVTYNV 255
Query: 198 MMTLYMSVGQV-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCD 256
M+ +Y +G+ +++ +++E++ K + D FT + IS+C +D+ +KFL E+ +
Sbjct: 256 MLDVYGKMGRSWDRILELLDEMRSKGLELDEFTCSTVISACGREGMLDEARKFLAELKFN 315
Query: 257 SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKD 316
G V Y +++ ++ A A S L E E + +TY+ L Y G D
Sbjct: 316 -GYKPGTVTYNSMLQVFGKAGIYTEA-LSILKEMEDNNCPPDSVTYNELAATYVRAGFLD 373
Query: 317 KIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRL 376
+ + ++ + Y ++ +Y G + + K + ++ N +
Sbjct: 374 EGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKDLGCAP-NVYTYNSV 432
Query: 377 LGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
L TE + + CAP A+
Sbjct: 433 LAMLGKKSRTEDVIKVLCEMKLNGCAPNRAT 463
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 110/274 (40%), Gaps = 17/274 (6%)
Query: 83 GNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHS 142
G +E ILKE+ + ++ +E T+ D A ID MT
Sbjct: 332 GKAGIYTEALSILKEMEDNNCPPDSVTYNELAATYVRAGFLDEGMAV-IDTMTS------ 384
Query: 143 GERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY 202
+G+ +A T YT ++ Y A + A LF +K + N YN ++ +
Sbjct: 385 -----KGVMPNAIT---YTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAML 436
Query: 203 MSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 262
+ E V V+ E+K P+ T+N ++ C+ + V K L EM + G D
Sbjct: 437 GKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMK-NCGFEPD 495
Query: 263 WVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 322
+ L++ Y V++ + E KS TY+ L+ A G+ + +
Sbjct: 496 KDTFNTLISAYARCGSEVDS-AKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVI 554
Query: 323 KSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 356
+ +R K +Y +L Y G++K + ++
Sbjct: 555 QDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKV 588
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 159 TYTALLHLYA--GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
TY L+ LY G W KAEE+ + ++ S + + YN ++ + G +++ V+
Sbjct: 673 TYNCLMDLYVREGECW--KAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEAIGVLS 730
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNID---QVKKFLDEMSC 255
E+ K + P I TYN ++S A D +V +F+ E +C
Sbjct: 731 EMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNC 772
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 82/215 (38%), Gaps = 38/215 (17%)
Query: 162 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 221
++L ++A K KA E+ + + L N YN +M LY+ G+ K V++ I+
Sbjct: 641 SMLSMFARNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQNS 700
Query: 222 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 281
PD+ +YN I K F C G L+
Sbjct: 701 GPEPDVVSYNTVI------------KGF-----CRKG--------------------LMQ 723
Query: 282 AESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICIL 341
L E Q +TY+ + YAG+ D+ +++ + + + + Y ++
Sbjct: 724 EAIGVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILV 783
Query: 342 SSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRL 376
Y G +E + + + K+ S FD + RL
Sbjct: 784 DGYCKAGKYEEAMDFVSKIKELDIS-FDDQSVKRL 817
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 46/246 (18%), Positives = 102/246 (41%), Gaps = 3/246 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY ALL+ A + AE + + ++ N Y+ ++ Y G V+ + V +EI
Sbjct: 533 TYNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEI 592
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+V P + + ++ +++ D++ G D V ++++++
Sbjct: 593 YDGHVFPSWILLRTLVLTNHKCRHLRGMERAFDQLQ-KYGYKPDLVVINSMLSMFARNKM 651
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
A E + Q TY+ L+ LY G K +++ K ++ + + +Y
Sbjct: 652 FSKAREMLHFIHECGL-QPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYN 710
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
++ + G ++E ++ + I N L ++ + L ++ANE +++
Sbjct: 711 TVIKGFCRKGLMQEAIGVLSEMTTKGIQP-TIVTYNTFLSGYAGMELFDEANEVIRFMIE 769
Query: 399 KNCAPT 404
NC P+
Sbjct: 770 HNCRPS 775
>gi|168045822|ref|XP_001775375.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673320|gb|EDQ59845.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 406
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 118/261 (45%), Gaps = 19/261 (7%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMS-----VGQVEKVALV 214
++ L+ AK A F+ VK++ + +YN ++T ++ +G + + L
Sbjct: 43 HSKLIVTMGKAKQLRMAVWFFKEVKRNGHRPDTSLYNALITAHLQAEDKRIGFAKALQLF 102
Query: 215 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274
E + N PD+ TYN+ + A +I QV++F +EM + + + Y ++ Y
Sbjct: 103 EEMKTKANCKPDLVTYNILLRGSAQVRDILQVERFFEEMEVEK-IHPNLISYNGVIGAYG 161
Query: 275 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 334
A LV E + + +T + LI Y + K++Q++KS+ K K TS
Sbjct: 162 KAGDLVQMEKTLFTMRILKHIKPDTVTSNTLIESYGYGRDFVKMEQVFKSMTAAKNKQTS 221
Query: 335 R----NYICILSSYLMLGHLKEVGEIIDQWK----QSATSDFDISACNRLLGAFSDVGLT 386
R Y +++SY LG EVG++ +W ++A ++ + L+ + +VG
Sbjct: 222 RPDAKTYNILMASYARLG---EVGKM--EWSCSRMEAANFKLNLRSYEILMTGYGEVGAI 276
Query: 387 EKANEFHMLLLQKNCAPTNAS 407
+E +LQ P ++
Sbjct: 277 ASMSECFYQMLQAGMQPQKST 297
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 141/340 (41%), Gaps = 9/340 (2%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
A +++ V +G + +L K + A ++ M+ K V + Y T I
Sbjct: 1072 AIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMI-QKGCVPNVVSYNTVI 1130
Query: 132 DLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLS 189
+ K +H G E + + + T+ ++ + A ELF +++S +
Sbjct: 1131 AGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCT 1190
Query: 190 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRK-NVVPDIFTYNLWISSCAATLNIDQVKK 248
N + YN ++ + ++ ++ E+ RK PDI TYN I + +D+ K
Sbjct: 1191 PNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYK 1250
Query: 249 FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIIL 308
+M D DD V Y ++V + ++ ++ L K+ ITY LI
Sbjct: 1251 LFLQMLSDGLAPDD-VTY-SIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDG 1308
Query: 309 YAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYL-MLGHLKEVGEIIDQWKQSATSD 367
+ GN DK +I + L ++K I +L G L++ GE+++ ++
Sbjct: 1309 FCKTGNLDKALEILQ-LLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVP 1367
Query: 368 FDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
D N LL F D LTE A + ++ Q C P NA+
Sbjct: 1368 -DTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNAT 1406
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/251 (19%), Positives = 112/251 (44%), Gaps = 11/251 (4%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
S TY +++ + + + A L E + + + N YN ++ + +VE ++E
Sbjct: 230 SVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLE 289
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
++ + PD+ +Y I+ +D+ + +D+M G + + Y LV+ +
Sbjct: 290 QMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMI-QRGCQPNVITYGTLVDGFCRV 348
Query: 277 SHLVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 332
L A VE + +T+R + ITY+ ++ ++ + ++ Q+ + + T
Sbjct: 349 GDLDGA-----VELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPP 403
Query: 333 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
+ NY I+S + G L+E ++++Q + D++ + L+ A + A E
Sbjct: 404 DAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRP-DVACLSTLIDALCKAAAIDSAQEL 462
Query: 393 HMLLLQKNCAP 403
+ + +CAP
Sbjct: 463 LRMSIGMDCAP 473
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 121/296 (40%), Gaps = 13/296 (4%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
A V+Q + G I+ K+ + + A ++ E M+ + + +T I
Sbjct: 389 AHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMI-RRGCRPDVACLSTLI 447
Query: 132 DLMTKVFGIHSGERYFE---GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNL 188
D + K I S + G+ A Y+ L+H AK +AE + + ++
Sbjct: 448 DALCKAAAIDSAQELLRMSIGMD-CAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRC 506
Query: 189 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 248
+ + YN ++ ++ L+ + ++ V+PD+ TY++ I S N+D K
Sbjct: 507 YPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFK 566
Query: 249 FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIIL 308
L+ M ++ D V Y L+N A V+ E +TY+ LI
Sbjct: 567 MLERMK-EAKCVPDVVTYSALINGLCKAG-TVDKAFDVFQEMLGCGCAPNLVTYNTLI-- 622
Query: 309 YAGLGNKDKIDQIWKSLR-MTKQKMT--SRNYICILSSYLMLGHLKEVGEIIDQWK 361
GL +K++Q + L M KQ T S Y C+++ L+E ++ + K
Sbjct: 623 -DGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMK 677
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 110/251 (43%), Gaps = 16/251 (6%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY+ L+ + A A ELF+ + + L +A ++ ++ GQ L E+
Sbjct: 163 TYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM 222
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K PD TYN I+ + + +D + L+EM D+G + + Y +++ + A+
Sbjct: 223 S-KTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMV-DNGFAPNVFSYNTVLHGFCKANR 280
Query: 279 LVNAESSTLVEAEKSITQ---RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
+ NA L E+ +T+ ++Y +I GL D++D+ + + Q+
Sbjct: 281 VENA----LWLLEQMVTRGCPPDVVSYTTVI---NGLCKLDQVDEACRVMDKMIQRGCQP 333
Query: 336 NYI---CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
N I ++ + +G L E++ + + I+ N ++ F E+A++
Sbjct: 334 NVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITY-NNIMHVFCRRNDMERAHQV 392
Query: 393 HMLLLQKNCAP 403
+++Q C P
Sbjct: 393 LQMMIQTGCPP 403
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 109/250 (43%), Gaps = 4/250 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+T L+H A A EL + + + + N +++N ++ S +++ + +E+
Sbjct: 879 TFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEM 938
Query: 219 KRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
+ + PD+FTY+ + S + +D + +++M G S + V Y +L++ A
Sbjct: 939 EESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMV-SKGCSPNVVTYSSLLHGLCKAG 997
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
L A ++ L +S +TY+ +I + LG D+ + + + + Y
Sbjct: 998 KLDEA-TALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTY 1056
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 397
+L ++ G ++ +++ + ++ N LL F E+A + ++
Sbjct: 1057 TVLLDAFCKCGKAEDAIGLVEVMVEKGYVP-NLFTYNSLLDMFCKKDEVERACQLLSSMI 1115
Query: 398 QKNCAPTNAS 407
QK C P S
Sbjct: 1116 QKGCVPNVVS 1125
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/315 (19%), Positives = 128/315 (40%), Gaps = 46/315 (14%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLS 153
++K L +++ ALE+ + M Y+T +D + K + R E + +S
Sbjct: 918 VIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDM-VS 976
Query: 154 AKTSE---TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 210
S TY++LLH A ++A L +R+ +S S N + YN ++ + +G++++
Sbjct: 977 KGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDE 1036
Query: 211 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 270
++EE+ P++ TY + + + C G ++D + LV
Sbjct: 1037 AYHLLEEMVDGGCQPNVVTYTVLLDA-----------------FCKCGKAED---AIGLV 1076
Query: 271 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 330
+ + ++ N TY+ L+ ++ KD++++ + L Q
Sbjct: 1077 EVMVEKGYVPN-----------------LFTYNSLLDMFC---KKDEVERACQLLSSMIQ 1116
Query: 331 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDF--DISACNRLLGAFSDVGLTEK 388
K N + + L +V E + +Q +++ DI N ++ A +
Sbjct: 1117 KGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDI 1176
Query: 389 ANEFHMLLLQKNCAP 403
A E L+ + C P
Sbjct: 1177 AYELFNLIQESGCTP 1191
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 78/373 (20%), Positives = 137/373 (36%), Gaps = 48/373 (12%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
A +++ VS+G V +L L K+ + A + + M T + Y T I
Sbjct: 967 ACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRM-TRSGCSPNIVTYNTII 1025
Query: 132 DLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLS 189
D K+ I E + TYT LL + E A L E + +
Sbjct: 1026 DGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYV 1085
Query: 190 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 249
N YN ++ ++ +VE+ ++ + +K VP++ +YN I+ + +
Sbjct: 1086 PNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLL 1145
Query: 250 LDEM---SC-------------------------------DSGGSDDWVKYVNLVNIYIT 275
L++M +C +SG + + V Y +LV+
Sbjct: 1146 LEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCK 1205
Query: 276 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS-LRMTKQKMTS 334
+ AE K ITY+ +I GL ++D+ +K L+M +
Sbjct: 1206 SRRFDQAEYLLREMTRKQGCSPDIITYNTVI---DGLCKSKRVDRAYKLFLQMLSDGLAP 1262
Query: 335 RN--YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC--NRLLGAFSDVGLTEKAN 390
+ Y ++SS + E +++ ++ FD A L+ F G +KA
Sbjct: 1263 DDVTYSIVISSLCKWRFMDEANNVLELMLKNG---FDPGAITYGTLIDGFCKTGNLDKAL 1319
Query: 391 EFHMLLLQKNCAP 403
E LLL K P
Sbjct: 1320 EILQLLLSKGSYP 1332
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 69/141 (48%), Gaps = 3/141 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY+AL++ A +KA ++F+ + + N + YN ++ + +VE+ A ++E +
Sbjct: 582 TYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIM 641
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
++++ PD TY I+ +++ + L EM D G D + Y L+ ++
Sbjct: 642 RKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMK-DKGCLPDRMTYGTLLRALQKTNN 700
Query: 279 LVNAESSTLVEAEKSITQRQW 299
L E L++ ++ + QW
Sbjct: 701 LELVEQ--LLKEMEATEEGQW 719
>gi|302804432|ref|XP_002983968.1| hypothetical protein SELMODRAFT_423071 [Selaginella moellendorffii]
gi|300148320|gb|EFJ14980.1| hypothetical protein SELMODRAFT_423071 [Selaginella moellendorffii]
Length = 598
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 146/330 (44%), Gaps = 20/330 (6%)
Query: 67 LPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSD 126
+P + I V G + + I+++L K Q+YK AL+ K F + D D
Sbjct: 80 VPGHRVASYINWLVDMGEIDSKPMVLSIIRKLTKRQKYKTALD--------KAFEIDDRD 131
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQS 186
Y ++D V ++ E F LP KT E Y +L Y + EKA + +++++
Sbjct: 132 YVLQVDYYAHV-DMYLAEMAFNRLPDDKKTEEAYNYILAGYVRNRMLEKAVVVMDKIREL 190
Query: 187 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNV--VPDIFTYNLWISSCAATLNID 244
L +A +M L+ +G ++ +V E + + P +LWI L+
Sbjct: 191 GL-VSAFSLEQMTLLFHYLGLERRIPALVVEARSLGLHFHPHFLNTHLWIKRRHGDLS-- 247
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS---HLVNAESSTLVEAEKSITQRQWIT 301
+++ ++E+ G S+ W Y+ + + YI A A + ++Q
Sbjct: 248 GMEEIVEELEL-MGRSNAWT-YIFIASAYIQAGFPEKAHAALGAAEAGIRNGRFKKQRKV 305
Query: 302 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 361
Y+ +++LY L + + I+++W L ++ + N++ ++ + G++ EI ++ +
Sbjct: 306 YNKILLLYGLLKDMEGIERVWGILN-SRPLVAVHNHLFMIEALGSAGNIGRAEEIFEELR 364
Query: 362 QSATSDFDISACNRLLGAFSDVGLTEKANE 391
+ + + GA++ GL +KA E
Sbjct: 365 KCRGVRKEYRQFIVMAGAYTKNGLMDKATE 394
>gi|302801570|ref|XP_002982541.1| hypothetical protein SELMODRAFT_421992 [Selaginella moellendorffii]
gi|300149640|gb|EFJ16294.1| hypothetical protein SELMODRAFT_421992 [Selaginella moellendorffii]
Length = 487
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 88/186 (47%), Gaps = 11/186 (5%)
Query: 61 RIFRISLPK--RSATNVIQRWVSEGNQ--------ATVSELRHILKELRKSQRYKHALEI 110
RI R +LP+ + +IQ W + ++ S LR I+ LR+ R+ AL+I
Sbjct: 67 RILR-ALPQSQHNVVEMIQEWSASDSRYFRAYNSDRLRSYLRVIIARLRRRSRFLQALQI 125
Query: 111 SEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGA 170
S WM + F ++ D R+ L ++ E+ + + + Y ALL YA
Sbjct: 126 SNWMFHDRRFTVATQDLVMRLYLTSRSGLFEEAEKILAEVHFTQRNEWAYLALLSGYASR 185
Query: 171 KWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 230
+ +AE+L+ R+K+ L+ + YN M+ +Y ++ + E+ VVPD T+
Sbjct: 186 RHVTRAEKLWRRMKERGLTKSPHGYNNMLIMYKRKKLHSRLRQLFVEMVLSGVVPDATTF 245
Query: 231 NLWISS 236
+ +S+
Sbjct: 246 LVILSA 251
>gi|15229734|ref|NP_187743.1| Pentatricopeptide repeat-containing protein-like protein
[Arabidopsis thaliana]
gi|12322893|gb|AAG51431.1|AC008153_4 hypothetical protein; 1030-2613 [Arabidopsis thaliana]
gi|332641512|gb|AEE75033.1| Pentatricopeptide repeat-containing protein-like protein
[Arabidopsis thaliana]
Length = 359
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 75/150 (50%), Gaps = 12/150 (8%)
Query: 101 SQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETY 160
+ R ALE+S+WM+ HK L D++ R L+ V G+ E+YFE +P + + Y
Sbjct: 53 TARLHQALEVSDWMIEHKICCLVPEDFSARFQLIENVLGLEEAEKYFESIPENLRGESLY 112
Query: 161 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 220
TALL Y AK +EK + +R + ++ + + S G +KV + E+K
Sbjct: 113 TALLRSY--AKRSEK--KYLDRASRIHIQEDERI--------SSFGTRDKVDESLREMKE 160
Query: 221 KNVVPDIFTYNLWISSCAATLNIDQVKKFL 250
N+ D T N + AA ++ +++FL
Sbjct: 161 SNIDLDRLTVNKALRVYAAASDVAAMERFL 190
>gi|242093812|ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
gi|241915619|gb|EER88763.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
Length = 786
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 136/299 (45%), Gaps = 19/299 (6%)
Query: 89 SELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGER--- 145
+++ +LK L S ++ AL + W + A+ ++++ + G G+
Sbjct: 104 ADIPSLLKALELSGHWEWALALLRWAGAE------GAADASALEMVVRALG-REGQHDAV 156
Query: 146 --YFEGLPLSAKTS---ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMT 200
+ +PL + YT +LH + A E+A ELF +++ ++ + YN ++
Sbjct: 157 CALLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERAVELFAELRRQGVAPTLVTYNVVLD 216
Query: 201 LYMSVGQV-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG 259
+Y +G+ ++ +++E++ V PD FT + I++C +D+ F +++ G
Sbjct: 217 VYGRMGRSWPRIVALLDEMRAAGVEPDDFTASTVIAACCRDGLVDEAVAFFEDLKA-RGH 275
Query: 260 SDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID 319
+ V Y L+ ++ A + A L E E+ Q +TY+ L YA G ++
Sbjct: 276 TPCVVTYNALLQVFGKAGNYTEA-LRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAA 334
Query: 320 QIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLG 378
+ ++ + Y ++++Y +G + E + DQ K+S +++ N +LG
Sbjct: 335 KCLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQMKKSGCVP-NVNTYNFILG 392
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 88/194 (45%), Gaps = 25/194 (12%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L YA A + E+A + + + L NA YN +MT Y ++G+V++ + +++
Sbjct: 316 TYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQM 375
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI------ 272
K+ VP++ TYN + + + L EMS SG + + V + ++ +
Sbjct: 376 KKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMS-RSGCTPNRVTWNTMLAVCGKRGM 434
Query: 273 --YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 330
Y+T ++ S VE + TY+ LI Y G++ +++
Sbjct: 435 EDYVT--RVLEGMKSCGVELSRD-------TYNTLIAAYGRCGSRTNAFKMY-------N 478
Query: 331 KMTSRNYICILSSY 344
+MTS + L++Y
Sbjct: 479 EMTSAGFAPCLTTY 492
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 1/114 (0%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
+ ++L +YA K E+F+ +KQS LS + + YN +M +Y + + ++ ++K
Sbjct: 597 FNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLK 656
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
V PD+ +YN I+ I + ++ L EM D G + V Y LV Y
Sbjct: 657 SSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIAD-GMAPCVVTYHTLVGGY 709
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 88/205 (42%), Gaps = 4/205 (1%)
Query: 146 YFEGLPLSAKTS--ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM 203
+FE L T TY ALL ++ A +A + + ++Q +A+ YNE+ Y
Sbjct: 266 FFEDLKARGHTPCVVTYNALLQVFGKAGNYTEALRVLKEMEQDGCQPDAVTYNELAGTYA 325
Query: 204 SVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW 263
G E+ A ++ + K ++P+ FTYN +++ +D+ D+M G
Sbjct: 326 RAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQMK--KSGCVPN 383
Query: 264 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 323
V N + + L E +S +T++ ++ + G +D + ++ +
Sbjct: 384 VNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLE 443
Query: 324 SLRMTKQKMTSRNYICILSSYLMLG 348
++ +++ Y ++++Y G
Sbjct: 444 GMKSCGVELSRDTYNTLIAAYGRCG 468
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 2/136 (1%)
Query: 177 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 236
E+ F+ VK + + +++N M+++Y G KV + + IK+ + PD+ TYN +
Sbjct: 579 EKAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDM 638
Query: 237 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 296
A + +K L+++ S D V Y ++N + L+ L E
Sbjct: 639 YAKCSESWEAEKILNQLK-SSQVKPDVVSYNTVINGFCKQG-LIKEAQRILSEMIADGMA 696
Query: 297 RQWITYDFLIILYAGL 312
+TY L+ YA L
Sbjct: 697 PCVVTYHTLVGGYASL 712
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 47/248 (18%), Positives = 96/248 (38%), Gaps = 7/248 (2%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
+TY L+ Y A +++ + + + YN ++ + G +V +
Sbjct: 455 DTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSK 514
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGS--DDWVKYVNLVNIYIT 275
++ K P+ +Y+L + A NI + E+ GG+ WV LV
Sbjct: 515 MRTKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEV---YGGTVFPSWVILRTLVIANFK 571
Query: 276 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
L E + E + + ++ ++ +YA G K+ +I+ S++ +
Sbjct: 572 CRRLGGIEKA-FQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLI 630
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 395
Y ++ Y E +I++Q K S D+ + N ++ F GL ++A
Sbjct: 631 TYNSLMDMYAKCSESWEAEKILNQLKSSQVKP-DVVSYNTVINGFCKQGLIKEAQRILSE 689
Query: 396 LLQKNCAP 403
++ AP
Sbjct: 690 MIADGMAP 697
>gi|15224262|ref|NP_179484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099137|sp|O64624.1|PP163_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g18940
gi|3004555|gb|AAC09028.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|15983785|gb|AAL10489.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|38564280|gb|AAR23719.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|330251736|gb|AEC06830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 153/337 (45%), Gaps = 33/337 (9%)
Query: 89 SELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRID-----LMTKVFGIHS- 142
++L ++K L S ++ A+ + EW+V LS + A ++D + ++ G S
Sbjct: 137 TDLVSLVKGLDDSGHWERAVFLFEWLV------LSSNSGALKLDHQVIEIFVRILGRESQ 190
Query: 143 ---GERYFEGLPLSAKTSET--YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 197
+ + +PL + YT +LH Y+ EKA +LFER+K+ S + YN
Sbjct: 191 YSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNV 250
Query: 198 MMTLYMSVGQV-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM-SC 255
++ ++ +G+ K+ V++E++ K + D FT + +S+CA + + K+F E+ SC
Sbjct: 251 ILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSC 310
Query: 256 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 315
G V Y L+ ++ A A S L E E++ +TY+ L+ Y G
Sbjct: 311 --GYEPGTVTYNALLQVFGKAGVYTEA-LSVLKEMEENSCPADSVTYNELVAAYVRAGFS 367
Query: 316 DKIDQIWKSLRMTKQKMTSR--NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 373
+ + + MTK+ + Y ++ +Y G E ++ K++ +
Sbjct: 368 KEAAGVIE--MMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVP-NTCTY 424
Query: 374 NRLLGAFSDVGLTEKANEFHMLLL---QKNCAPTNAS 407
N +L S +G ++NE +L C+P A+
Sbjct: 425 NAVL---SLLGKKSRSNEMIKMLCDMKSNGCSPNRAT 458
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 54/98 (55%), Gaps = 4/98 (4%)
Query: 159 TYTALLHLYA--GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
TY +L+ +Y G W KAEE+ + +++S L + + YN ++ + G +++ ++
Sbjct: 668 TYNSLMDMYVRRGECW--KAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLS 725
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 254
E+ + + P IFTYN ++S A +++ ++ M+
Sbjct: 726 EMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMA 763
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/95 (21%), Positives = 50/95 (52%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
+ ++L ++ ++AE + E +++ LS + + YN +M +Y+ G+ K +++ ++
Sbjct: 634 FNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLE 693
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 254
+ + PD+ +YN I + + + L EM+
Sbjct: 694 KSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMT 728
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 102/234 (43%), Gaps = 3/234 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +++H A+ +KAE ++ + N YN ++ Y S GQ ++ V +E+
Sbjct: 256 TYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 315
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+R +++PD+ T ++ + S I + + D M+ G + D Y ++N Y T
Sbjct: 316 RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAM-KGQNPDVFSYNIMLNGYATKGC 374
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
LV+ + I + T++ LI YA G DK I+ +R K Y
Sbjct: 375 LVDMTDLFDLMLGDGIAP-DFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYR 433
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
++++ +G + + E +Q + D A N L+ F G KA E
Sbjct: 434 TVIAALCRIGKMDDAMEKFNQMIDQGVAP-DKYAYNCLIQGFCTHGSLLKAKEL 486
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 98/233 (42%), Gaps = 5/233 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSN--LSFNALMYNEMMTLYMSVGQVEKVALVVE 216
+Y+ LL + +A++L + + S N + YN ++ + G V K + +
Sbjct: 184 SYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFK 243
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
E+ ++ + PD+ TYN + + +D+ + FL +M ++W Y NL+ Y +
Sbjct: 244 EMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWT-YNNLIYGYSST 302
Query: 277 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 336
A E + +T L+ G + ++ ++ M Q +
Sbjct: 303 GQWKEA-VRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFS 361
Query: 337 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
Y +L+ Y G L ++ ++ D + D N L+ A+++ G+ +KA
Sbjct: 362 YNIMLNGYATKGCLVDMTDLFDLMLGDGIAP-DFYTFNVLIKAYANCGMLDKA 413
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 56/293 (19%), Positives = 106/293 (36%), Gaps = 39/293 (13%)
Query: 148 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 207
+G + + TS TY L+ A E A F ++ ++ L N ++ N ++ + +
Sbjct: 102 QGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKR 161
Query: 208 V-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM------------- 253
E + +++ VPD+F+Y++ + S Q L M
Sbjct: 162 TDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVA 221
Query: 254 ----------------SCD-------SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 290
+CD G D V Y ++V+ A + AE+
Sbjct: 222 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMV 281
Query: 291 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 350
K + W TY+ LI Y+ G + +++K +R ++ S G +
Sbjct: 282 NKRVLPNNW-TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKI 340
Query: 351 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
KE ++ D + D+ + N +L ++ G + L+L AP
Sbjct: 341 KEARDVFDTMAMKGQNP-DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAP 392
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/228 (17%), Positives = 99/228 (43%), Gaps = 11/228 (4%)
Query: 127 YATRIDL--MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVK 184
YAT+ L MT +F + G+ G+ A T+ L+ YA +KA +F ++
Sbjct: 369 YATKGCLVDMTDLFDLMLGD----GI---APDFYTFNVLIKAYANCGMLDKAMIIFNEMR 421
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
+ + + Y ++ +G+++ ++ + V PD + YN I ++
Sbjct: 422 DHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLL 481
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 304
+ K+ + E+ ++G D V + +++N +++A++ + + + Y
Sbjct: 482 KAKELISEIM-NNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGL-HPDAVVYSM 539
Query: 305 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 352
L+ Y +G +K +++ ++ + Y +++ Y +G + E
Sbjct: 540 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDE 587
>gi|357502615|ref|XP_003621596.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496611|gb|AES77814.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 105/245 (42%), Gaps = 3/245 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +LL + A E A++L + Q + +A YN + GQ++ V+EE+
Sbjct: 286 TYNSLLSVCASKGMWETAQKLLSEMDQKGIVRDAFTYNTYLDTLCKGGQIDLARRVLEEM 345
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ V P + TY+ I CA ++ +EM S S D V Y +V IY
Sbjct: 346 SSRRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMKLRS-ISVDRVSYNTMVGIYAKLGR 404
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
A E E +R +TY+ L+ Y G D++ ++++ ++ + Y
Sbjct: 405 FDEAIGQC-KEMESCGMKRDVVTYNALLSGYGRYGMYDEVRRLFEEMKAWNIYPNTLTYS 463
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
++ Y G +E ++ +K+ A + D+ ++ + GL E + + +++
Sbjct: 464 TMIDVYTKGGMFQEAMDVYKDFKK-AQLEVDVVFYTSIIDSLCKNGLVESSIMLLIAMIE 522
Query: 399 KNCAP 403
K P
Sbjct: 523 KGIKP 527
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 64/131 (48%), Gaps = 6/131 (4%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSAK----TSETYTALLHLYAGAKWTEKAEELFER 182
Y T +D + K I R E +S++ T TY+ ++ A A E A L+E
Sbjct: 322 YNTYLDTLCKGGQIDLARRVLE--EMSSRRVWPTVVTYSTMIDGCAKANLLEDALNLYEE 379
Query: 183 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 242
+K ++S + + YN M+ +Y +G+ ++ +E++ + D+ TYN +S
Sbjct: 380 MKLRSISVDRVSYNTMVGIYAKLGRFDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYGM 439
Query: 243 IDQVKKFLDEM 253
D+V++ +EM
Sbjct: 440 YDEVRRLFEEM 450
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 102/234 (43%), Gaps = 3/234 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +++H A+ +KAE ++ + N YN ++ Y S GQ ++ V +E+
Sbjct: 259 TYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 318
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+R +++PD+ T ++ + S I + + D M+ G + D Y ++N Y T
Sbjct: 319 RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAM-KGQNPDVFSYNIMLNGYATKGC 377
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
LV+ + I + T++ LI YA G DK I+ +R K Y
Sbjct: 378 LVDMTDLFDLMLGDGIAP-DFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYR 436
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
++++ +G + + E +Q + D A N L+ F G KA E
Sbjct: 437 TVIAALCRIGKMDDAMEKFNQMIDQGVAP-DKYAYNCLIQGFCTHGSLLKAKEL 489
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 98/233 (42%), Gaps = 5/233 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSN--LSFNALMYNEMMTLYMSVGQVEKVALVVE 216
+Y+ LL + +A++L + + S N + YN ++ + G V K + +
Sbjct: 187 SYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFK 246
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
E+ ++ + PD+ TYN + + +D+ + FL +M ++W Y NL+ Y +
Sbjct: 247 EMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWT-YNNLIYGYSST 305
Query: 277 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 336
A E + +T L+ G + ++ ++ M Q +
Sbjct: 306 GQWKEA-VRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFS 364
Query: 337 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
Y +L+ Y G L ++ ++ D + D N L+ A+++ G+ +KA
Sbjct: 365 YNIMLNGYATKGCLVDMTDLFDLMLGDGIAP-DFYTFNVLIKAYANCGMLDKA 416
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 56/293 (19%), Positives = 106/293 (36%), Gaps = 39/293 (13%)
Query: 148 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 207
+G + + TS TY L+ A E A F ++ ++ L N ++ N ++ + +
Sbjct: 105 QGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKR 164
Query: 208 V-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM------------- 253
E + +++ VPD+F+Y++ + S Q L M
Sbjct: 165 TDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVA 224
Query: 254 ----------------SCD-------SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 290
+CD G D V Y ++V+ A + AE+
Sbjct: 225 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMV 284
Query: 291 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 350
K + W TY+ LI Y+ G + +++K +R ++ S G +
Sbjct: 285 NKRVLPNNW-TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKI 343
Query: 351 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
KE ++ D + D+ + N +L ++ G + L+L AP
Sbjct: 344 KEARDVFDTMAMKGQNP-DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAP 395
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 41/228 (17%), Positives = 100/228 (43%), Gaps = 11/228 (4%)
Query: 127 YATRIDL--MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVK 184
YAT+ L MT +F + G+ G+ A T+ L+ YA +KA +F ++
Sbjct: 372 YATKGCLVDMTDLFDLMLGD----GI---APDFYTFNVLIKAYANCGMLDKAMIIFNEMR 424
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
+ + + Y ++ +G+++ ++ + V PD + YN I ++
Sbjct: 425 DHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLL 484
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 304
+ K+ + E+ ++G D V + +++N +++A++ + + + Y+
Sbjct: 485 KAKELISEIM-NNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGL-HPDAVVYNM 542
Query: 305 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 352
L+ Y +G +K +++ ++ + Y +++ Y +G + E
Sbjct: 543 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDE 590
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 102/234 (43%), Gaps = 3/234 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +++H A+ +KAE ++ + N YN ++ Y S GQ ++ V +E+
Sbjct: 269 TYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 328
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+R +++PD+ T ++ + S I + + D M+ G + D Y ++N Y T
Sbjct: 329 RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAM-KGQNPDVFSYNIMLNGYATKGC 387
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
LV+ + I + T++ LI YA G DK I+ +R K Y
Sbjct: 388 LVDMTDLFDLMLGDGIAP-DFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYR 446
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
++++ +G + + E +Q + D A N L+ F G KA E
Sbjct: 447 TVIAALCRIGKMDDAMEKFNQMIDQGVAP-DKYAYNCLIQGFCTHGSLLKAKEL 499
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 98/233 (42%), Gaps = 5/233 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSN--LSFNALMYNEMMTLYMSVGQVEKVALVVE 216
+Y+ LL + +A++L + + S N + YN ++ + G V K + +
Sbjct: 197 SYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFK 256
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
E+ ++ + PD+ TYN + + +D+ + FL +M ++W Y NL+ Y +
Sbjct: 257 EMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWT-YNNLIYGYSST 315
Query: 277 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 336
A E + +T L+ G + ++ ++ M Q +
Sbjct: 316 GQWKEA-VRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFS 374
Query: 337 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
Y +L+ Y G L ++ ++ D + D N L+ A+++ G+ +KA
Sbjct: 375 YNIMLNGYATKGCLVDMTDLFDLMLGDGIAP-DFYTFNVLIKAYANCGMLDKA 426
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 56/293 (19%), Positives = 106/293 (36%), Gaps = 39/293 (13%)
Query: 148 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 207
+G + + TS TY L+ A E A F ++ ++ L N ++ N ++ + +
Sbjct: 115 QGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKR 174
Query: 208 V-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM------------- 253
E + +++ VPD+F+Y++ + S Q L M
Sbjct: 175 TDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVA 234
Query: 254 ----------------SCD-------SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 290
+CD G D V Y ++V+ A + AE+
Sbjct: 235 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMV 294
Query: 291 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 350
K + W TY+ LI Y+ G + +++K +R ++ S G +
Sbjct: 295 NKRVLPNNW-TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKI 353
Query: 351 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
KE ++ D + D+ + N +L ++ G + L+L AP
Sbjct: 354 KEARDVFDTMAMKGQNP-DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAP 405
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/228 (17%), Positives = 99/228 (43%), Gaps = 11/228 (4%)
Query: 127 YATRIDL--MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVK 184
YAT+ L MT +F + G+ G+ A T+ L+ YA +KA +F ++
Sbjct: 382 YATKGCLVDMTDLFDLMLGD----GI---APDFYTFNVLIKAYANCGMLDKAMIIFNEMR 434
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
+ + + Y ++ +G+++ ++ + V PD + YN I ++
Sbjct: 435 DHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLL 494
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 304
+ K+ + E+ ++G D V + +++N +++A++ + + + Y
Sbjct: 495 KAKELISEIM-NNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGL-HPDAVVYSM 552
Query: 305 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 352
L+ Y +G +K +++ ++ + Y +++ Y +G + E
Sbjct: 553 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDE 600
>gi|168033824|ref|XP_001769414.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679334|gb|EDQ65783.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 410
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 106/236 (44%), Gaps = 25/236 (10%)
Query: 95 LKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLS- 153
+KEL + AL++ ++ H E+ L + + T I ++ + + FEG+ +
Sbjct: 1 MKELEIRGARRQALQVFRFLQEHLEYELKEHNCVTIISILGREGKLGLAREIFEGMSKAG 60
Query: 154 -AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG-QVEKV 211
A + YTALL YA ++A LFE +K+ S N L YN ++ ++ +
Sbjct: 61 VAPSVHAYTALLSGYAKQGLLKEAWALFEAMKEKGCSPNVLTYNTLINACTKRAYRLPDL 120
Query: 212 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
+ EE+K+ V P+ TYN +++C D + L EM K VN +
Sbjct: 121 VGLFEEMKQAGVQPNDITYNCMVNACVCLSLFDTASQILKEM-----------KAVNCLP 169
Query: 272 IYITASHLVNA--------ESSTLVEAEKSI--TQRQWITYDFLIILYAGLGNKDK 317
I+ + ++N+ E+ L E K + + W TY+ L+ YA G +K
Sbjct: 170 NVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSW-TYNSLLKAYAREGRYEK 224
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 84/195 (43%), Gaps = 2/195 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+YT +++ + ++A ELFE +K+ S N+ YN ++ Y G+ EK + +
Sbjct: 173 SYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGM 232
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + +PD++TYN I C + + EM G + D V Y +++ Y S
Sbjct: 233 EDEGCIPDLYTYNTVIDMCGRGGLFAEAEGVFLEMQ-RKGCTPDRVTYNTMLDAYSKWSR 291
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
A T W TY+ L+ G+ + QI+ L+ ++
Sbjct: 292 RGRARDLLKTMKRAGCTPDLW-TYNILLDAAGKAGSASEAMQIFHELKAAGHSPNLVSFS 350
Query: 339 CILSSYLMLGHLKEV 353
+++ Y LG+ +E
Sbjct: 351 ALINMYGRLGYFEEA 365
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/229 (19%), Positives = 97/229 (42%), Gaps = 4/229 (1%)
Query: 176 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
A E+FE + ++ ++ + Y +++ Y G +++ + E +K K P++ TYN I+
Sbjct: 49 AREIFEGMSKAGVAPSVHAYTALLSGYAKQGLLKEAWALFEAMKEKGCSPNVLTYNTLIN 108
Query: 236 SCAA-TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 294
+C + + +EM +G + + Y +VN + S L + S L E +
Sbjct: 109 ACTKRAYRLPDLVGLFEEMK-QAGVQPNDITYNCMVNACVCLS-LFDTASQILKEMKAVN 166
Query: 295 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 354
I+Y +I G D+ ++++ ++ + S Y +L +Y G ++
Sbjct: 167 CLPNVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAM 226
Query: 355 EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
+ + D+ N ++ GL +A + + +K C P
Sbjct: 227 CLFVGMEDEGCIP-DLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKGCTP 274
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 79/196 (40%), Gaps = 8/196 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +LL YA EKA LF ++ + YN ++ + G + V E+
Sbjct: 208 TYNSLLKAYAREGRYEKAMCLFVGMEDEGCIPDLYTYNTVIDMCGRGGLFAEAEGVFLEM 267
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+RK PD TYN + + + + + L M D W NI + A+
Sbjct: 268 QRKGCTPDRVTYNTMLDAYSKWSRRGRARDLLKTMKRAGCTPDLWT-----YNILLDAAG 322
Query: 279 LVNAESSTLV---EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
+ S + E + + +++ LI +Y LG ++ ++ W +R T +
Sbjct: 323 KAGSASEAMQIFHELKAAGHSPNLVSFSALINMYGRLGYFEEAERAWVEMRATGCVPNAT 382
Query: 336 NYICILSSYLMLGHLK 351
Y +++SY G K
Sbjct: 383 AYCGLMNSYSHHGMYK 398
>gi|357458279|ref|XP_003599420.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488468|gb|AES69671.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 511
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 146/332 (43%), Gaps = 8/332 (2%)
Query: 70 RSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYAT 129
+ A+ + + + EG + TV L ++ +S ++HA E M + + Y+
Sbjct: 149 KEASQLYETMLFEGLKPTVDVLTALVSAYGQSGLFRHAFSTIEDMKSVVDCKPDVYTYSV 208
Query: 130 RIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAE-ELFERVKQS 186
I K ER + S S TY +++ Y A E+ E L + ++
Sbjct: 209 LISCCAKFRRFDLIERVLADMSYSGIECNSVTYNSIIDGYGKAGMFEQMENSLTDMIENE 268
Query: 187 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 246
N + N ++ Y + G+++K+ +E + ++ PDI T+N+ I S D++
Sbjct: 269 NCQPDVFTLNSLIGSYGNGGKIDKMEKWYDEFQLMSIKPDIKTFNMMIKSYGKAGMYDKM 328
Query: 247 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQ-WITYDFL 305
K +D M + V Y ++ +Y A + + + K I + +TY L
Sbjct: 329 KSVMDFME-RRFFAPTIVTYNTVIEVYGKAGEIEKMDKH--FKNMKHIGMKPNSVTYCSL 385
Query: 306 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 365
+ Y+ G KID I + + + + + + CI+S+Y +G LK++GE+ + +
Sbjct: 386 VNAYSKAGLIRKIDSILRHVENSDVILDTPFFNCIISAYGQVGDLKKMGELFLAMR-ARK 444
Query: 366 SDFDISACNRLLGAFSDVGLTEKANEFHMLLL 397
+ D + ++ A++ G+TE A +++
Sbjct: 445 CEPDRTTFTCMIQAYNTQGITEAAKNLETMMI 476
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 93/202 (46%), Gaps = 2/202 (0%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
+TYT LL + + K ++A +L+E + L + +++ Y G +E+
Sbjct: 133 QTYTKLLMMLSKCKQPKEASQLYETMLFEGLKPTVDVLTALVSAYGQSGLFRHAFSTIED 192
Query: 218 IKR-KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
+K + PD++TY++ IS CA D +++ L +MS SG + V Y ++++ Y A
Sbjct: 193 MKSVVDCKPDVYTYSVLISCCAKFRRFDLIERVLADMS-YSGIECNSVTYNSIIDGYGKA 251
Query: 277 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 336
E+S E Q T + LI Y G DK+++ + ++ K +
Sbjct: 252 GMFEQMENSLTDMIENENCQPDVFTLNSLIGSYGNGGKIDKMEKWYDEFQLMSIKPDIKT 311
Query: 337 YICILSSYLMLGHLKEVGEIID 358
+ ++ SY G ++ ++D
Sbjct: 312 FNMMIKSYGKAGMYDKMKSVMD 333
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 81/183 (44%), Gaps = 6/183 (3%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLH-LYAGAKWTEKAEELFERV 183
Y T ID++ K + YFE + T YT+L+H L KW +KAEEL +
Sbjct: 414 YGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKW-DKAEELILEM 472
Query: 184 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 243
+ N + +N ++ + G+V + + + + R V PDI TYN I C +
Sbjct: 473 LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKM 532
Query: 244 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 303
D+ K L M G D V Y L+N Y S + +A + E S ITY+
Sbjct: 533 DEATKLLASM-VSVGVKPDIVTYGTLINGYCRVSRMDDA-LALFKEMVSSGVSPNIITYN 590
Query: 304 FLI 306
++
Sbjct: 591 IIL 593
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 88/209 (42%), Gaps = 18/209 (8%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY++++ A+ +KA E+ + ++ + + + YN ++ Y S GQ ++ ++++
Sbjct: 238 TYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKM 297
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ V P++ TY+ ++ + +K D M+ G D Y L+ Y T
Sbjct: 298 RSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMT-KRGLEPDIATYRTLLQGYATKGA 356
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
LV + + I Q ++ LI YA ++K+DQ +Q + N +
Sbjct: 357 LVEMHALLDLMVRNGI-QPDHHVFNILICAYA---KQEKVDQAMLVFSKMRQHGLNPNVV 412
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSD 367
C G +ID +S + D
Sbjct: 413 C-------------YGTVIDVLCKSGSVD 428
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 81/183 (44%), Gaps = 6/183 (3%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLH-LYAGAKWTEKAEELFERV 183
Y T ID++ K + YFE + T YT+L+H L KW +KAEEL +
Sbjct: 414 YGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKW-DKAEELILEM 472
Query: 184 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 243
+ N + +N ++ + G+V + + + + R V PDI TYN I C +
Sbjct: 473 LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKM 532
Query: 244 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 303
D+ K L M G D V Y L+N Y S + +A + E S ITY+
Sbjct: 533 DEATKLLASM-VSVGVKPDIVTYGTLINGYCRVSRMDDA-LALFKEMVSSGVSPNIITYN 590
Query: 304 FLI 306
++
Sbjct: 591 IIL 593
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 88/209 (42%), Gaps = 18/209 (8%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY++++ A+ +KA E+ + ++ + + + YN ++ Y S GQ ++ ++++
Sbjct: 238 TYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKM 297
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ V P++ TY+ ++ + +K D M+ G D Y L+ Y T
Sbjct: 298 RSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMT-KRGLEPDIATYRTLLQGYATKGA 356
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
LV + + I Q ++ LI YA ++K+DQ +Q + N +
Sbjct: 357 LVEMHALLDLMVRNGI-QPDHHVFNILICAYA---KQEKVDQAMLVFSKMRQHGLNPNVV 412
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSD 367
C G +ID +S + D
Sbjct: 413 C-------------YGTVIDVLCKSGSVD 428
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/308 (20%), Positives = 134/308 (43%), Gaps = 7/308 (2%)
Query: 100 KSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE- 158
K A EI MVT Y + +D + + + + L +
Sbjct: 89 KQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDK 148
Query: 159 -TYTALLHLYAGAKWTEKAEELFERV-KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
T++AL+ + A+ ++A +L++ + S+ + + Y ++ + G +EK ++
Sbjct: 149 FTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLG 208
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
++ + VP++ TY+ + ++DQ M+ G + V Y L++ + A
Sbjct: 209 VMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMT-SKGCVPNVVTYTTLIH-GLCA 266
Query: 277 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR- 335
+H V+A + E + ++Y+ L+ Y LG ++ Q++K + TK + R
Sbjct: 267 AHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEM-ATKSCLPDRI 325
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 395
Y C++ + L+E +++ K +A D D+ + ++ +S +A EF
Sbjct: 326 TYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQE 385
Query: 396 LLQKNCAP 403
++ +N AP
Sbjct: 386 MIARNVAP 393
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 109/253 (43%), Gaps = 17/253 (6%)
Query: 159 TYTALLHLYAGAKWTEKAEELF-ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
TY+ +++ + ++A E+ E V + ++ + + Y ++ G++++ +V E
Sbjct: 79 TYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVRE 138
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
+K K V PD FT++ I+ +D+ K E+ S D V Y L++ + +
Sbjct: 139 MKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSG 198
Query: 278 HLVNA-ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 336
+L A + ++E K + +TY L+ GL +DQ R +MTS+
Sbjct: 199 NLEKAMKMLGVMEGRKCVP--NVVTYSSLL---HGLCKAGDLDQALDLFR----RMTSKG 249
Query: 337 YICILSSYLMLGHLKEVGEIIDQWK------QSATSDFDISACNRLLGAFSDVGLTEKAN 390
+ + +Y L H +D + + D + N LL + +G E+A
Sbjct: 250 CVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAK 309
Query: 391 EFHMLLLQKNCAP 403
+ + K+C P
Sbjct: 310 QLFKEMATKSCLP 322
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 88/203 (43%), Gaps = 7/203 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT L+H A + A L + + + + + YN ++ Y +G++E+ + +E+
Sbjct: 256 TYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEM 315
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K+ +PD TY + +++ + L+ M +G D V Y +V Y A
Sbjct: 316 ATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKR 375
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
V A + + E +TY LI GL ++D ++ + K + R
Sbjct: 376 FVEA-AEFIQEMIARNVAPNAVTYSSLI---DGLCKAGRVDH---AMEVLKNMVNKRVEP 428
Query: 339 CILSSYLMLGHLKEVGEIIDQWK 361
+ + ++G L +G++ + WK
Sbjct: 429 SVGTFNSVIGALCRLGDMDEAWK 451
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 111/256 (43%), Gaps = 17/256 (6%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
T T+T ++ + A ++A FE++++ ++ N YN ++ K V+
Sbjct: 6 TVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAYEVL 64
Query: 216 EEIKR-KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274
+E++ K+V PD+ TY+ I+ +D+ + L EM G + D V Y ++V+
Sbjct: 65 KEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLC 124
Query: 275 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 334
+ A + E + + T+ LI G N K+D+ +L++ K+ +TS
Sbjct: 125 RDGKMDRA-CEMVREMKLKGVEPDKFTFSALI---TGWCNARKVDE---ALKLYKEILTS 177
Query: 335 RN-------YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 387
+ Y ++ + G+L++ +++ + ++ + LL G +
Sbjct: 178 SSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVP-NVVTYSSLLHGLCKAGDLD 236
Query: 388 KANEFHMLLLQKNCAP 403
+A + + K C P
Sbjct: 237 QALDLFRRMTSKGCVP 252
>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g12700, mitochondrial-like
[Glycine max]
Length = 555
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 64/118 (54%), Gaps = 5/118 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY AL+ + + +A ELF R+ + L + L YN ++ Y + V++ ++ +EI
Sbjct: 302 TYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEI 361
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
+ KN+VP++ TYN I + V++ +DEM CD G S D V Y NI++ A
Sbjct: 362 RCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEM-CDRGQSPDIVTY----NIFLDA 414
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 91/231 (39%), Gaps = 3/231 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY+ ++ + A LF V + + + YN ++ SVGQ + ++ +
Sbjct: 197 TYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMM 256
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
R N+ PD +T+N+ + + I + + M G D V Y L+ + +++
Sbjct: 257 VRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMM-KRGEKPDIVTYNALMEGFCLSNN 315
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ A K + + Y+ LI Y + D+ ++K +R Y
Sbjct: 316 VSEAR-ELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYN 374
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
++ LG + V E++D+ S DI N L AF EKA
Sbjct: 375 SLIDGLCKLGRMSCVQELVDEMCDRGQSP-DIVTYNIFLDAFCKSKPYEKA 424
>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
Length = 795
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 115/249 (46%), Gaps = 11/249 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+ +LL +Y A+ E+A + +R++ + + + + YN +++ Y+ G +E+ + +E+
Sbjct: 292 TFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEM 351
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + + PD+ TY IS ID EM +G S + Y L+ + H
Sbjct: 352 EFRGMKPDVVTYTTLISGLDRVGKIDAALATYSEM-VRNGCSPNLCTYNALIKL-----H 405
Query: 279 LVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 334
V + + ++ + + +T++ L+ ++ G ++ ++K ++
Sbjct: 406 GVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPER 465
Query: 335 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 394
Y+ ++SSY G + EI + ++ DIS N +L A + G E+A +
Sbjct: 466 DTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYP-DISTYNAVLSALARGGRWEQAEKLFA 524
Query: 395 LLLQKNCAP 403
++ ++C P
Sbjct: 525 EMVDRDCKP 533
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
Query: 162 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 221
A++ +Y K +K EE+ + +++++ +A YN +M +Y +G EK ++ EIK
Sbjct: 610 AMVSIYGKNKMVKKVEEVLSLMMENSINHSAATYNSLMHMYSRLGDCEKCESILTEIKSS 669
Query: 222 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274
+ PD ++YN I + + + + EM C SG D V Y NI+I
Sbjct: 670 GMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKC-SGVKPDIVTY----NIFI 717
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 50/90 (55%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
++ TY +L+H+Y+ EK E + +K S + + YN ++ Y GQ+++ + +
Sbjct: 639 SAATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLF 698
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQ 245
E+K V PDI TYN++I S A + ++
Sbjct: 699 SEMKCSGVKPDIVTYNIFIKSYVANIMFEE 728
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 114/253 (45%), Gaps = 19/253 (7%)
Query: 159 TYTALLHLYA-GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVA----- 212
TY A+L A G +W E+AE+LF + + + L Y+ ++ Y + +++K+
Sbjct: 502 TYNAVLSALARGGRW-EQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTLSED 560
Query: 213 LVVEEIKRKN-VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN-LV 270
+ E I+R N +V + N ++ N+ + +K E+ D + +N +V
Sbjct: 561 IYAERIERHNWLVKTLVLVNNKVN------NLPETEKAFQELRRRRCSLD--INVLNAMV 612
Query: 271 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 330
+IY + E + E SI TY+ L+ +Y+ LG+ +K + I ++ +
Sbjct: 613 SIYGKNKMVKKVEEVLSLMMENSINH-SAATYNSLMHMYSRLGDCEKCESILTEIKSSGM 671
Query: 331 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 390
+ +Y ++ +Y G +KE + + K S DI N + ++ + E+A
Sbjct: 672 RPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKP-DIVTYNIFIKSYVANIMFEEAI 730
Query: 391 EFHMLLLQKNCAP 403
+ L+ + C P
Sbjct: 731 DLVRYLVTQGCRP 743
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 94/231 (40%), Gaps = 13/231 (5%)
Query: 128 ATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN 187
T I + + + E P A + YTAL+ ++ A A +F+R+
Sbjct: 157 PTAIRVFARAGCLAEASAILEAAP--APDASAYTALVSAFSRAGRFRDAVAVFQRMVDGG 214
Query: 188 LSFNALMYNEMMTLY--MSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 245
+ + YN + Y MSV E VALV + +K + D +TYN IS C +
Sbjct: 215 VQPALVTYNVVFHAYSKMSVPWKEVVALV-DSMKEDGIERDRYTYNTLISCCRRRGLHRE 273
Query: 246 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFL 305
+ DEM +G D V + +L+++Y A A L E + +TY+ L
Sbjct: 274 AAQVFDEMKA-AGFEPDKVTFNSLLDVYGKARKHEEA-IGVLKRMENAGCTPSVVTYNSL 331
Query: 306 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 356
I Y G ++ ++ + + K Y ++S L VG+I
Sbjct: 332 ISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISG------LDRVGKI 376
>gi|224124604|ref|XP_002319373.1| predicted protein [Populus trichocarpa]
gi|222857749|gb|EEE95296.1| predicted protein [Populus trichocarpa]
Length = 810
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 122/274 (44%), Gaps = 21/274 (7%)
Query: 133 LMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNA 192
L K F + G R P TY +L+ +++G ++A +L + ++++
Sbjct: 357 LYDKAFSLFKGMRNHGTWP----DEVTYNSLIQMFSGGDLMDQARDLLDEMQEAGFKPQC 412
Query: 193 LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 252
L ++ +M Y +GQ+ V +E+ + V P+ Y I+ A N+++ K+
Sbjct: 413 LTFSAVMACYARLGQLSDAVDVYQEMVKAGVKPNEVVYGSLINGFAEVGNVEEALKYFRM 472
Query: 253 MSCDSGGSDDWVKYVNLVNIYI------TASHLVNAESSTLVEAEKSITQRQWITYDFLI 306
M +SG + + +L+ +Y A HL +E I I + +I
Sbjct: 473 ME-ESGIPANQIVLTSLIKVYSKLGCFDGAKHLYKKMKD--LEGGPDI-----IASNSMI 524
Query: 307 ILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATS 366
LYA LG + + ++K+LR Q ++ ++ Y +G L E +I ++ KQS
Sbjct: 525 SLYADLGMISEAELVFKNLRENGQA-DGVSFATMMYLYKSMGMLDEAIDIAEEMKQSGLL 583
Query: 367 DFDISACNRLLGAFSDVG-LTEKANEFHMLLLQK 399
D + N+++ ++ G L E A H ++ QK
Sbjct: 584 R-DCVSYNKVMACYATNGQLRECAELLHEMIGQK 616
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 49/88 (55%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
+ TY L+ LY A + A E+F + +S ++ + + +N M+ S G + + +++
Sbjct: 132 TSTYNTLIDLYGKAGRLKDAAEVFSEMLKSGVAMDTITFNTMIFTCGSHGLLSEAESLLD 191
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNID 244
+++ + + PD TYN+++S A NI+
Sbjct: 192 KMEERRISPDTRTYNIFLSLYADAGNIN 219
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 95/238 (39%), Gaps = 10/238 (4%)
Query: 156 TSETYTALLHLYAG-AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
+S+ A++ YA W E + + L YN M+ Y +K +
Sbjct: 305 SSKVRAAIIDAYAERGLWAEAEAVFYGKRDLLGPEKGVLEYNVMVKAYGKAKLYDKAFSL 364
Query: 215 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274
+ ++ PD TYN I + +DQ + LDEM ++G + + ++ Y
Sbjct: 365 FKGMRNHGTWPDEVTYNSLIQMFSGGDLMDQARDLLDEMQ-EAGFKPQCLTFSAVMACYA 423
Query: 275 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 334
L +A E K+ + + Y LI +A +GN +++ K RM ++
Sbjct: 424 RLGQLSDA-VDVYQEMVKAGVKPNEVVYGSLINGFAEVGN---VEEALKYFRMMEESGIP 479
Query: 335 RNYICILS---SYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
N I + S Y LG + + K DI A N ++ ++D+G+ +A
Sbjct: 480 ANQIVLTSLIKVYSKLGCFDGAKHLYKKMKDLEGGP-DIIASNSMISLYADLGMISEA 536
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 45/77 (58%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
++ +++LY ++A ++ E +KQS L + + YN++M Y + GQ+ + A ++ E+
Sbjct: 553 SFATMMYLYKSMGMLDEAIDIAEEMKQSGLLRDCVSYNKVMACYATNGQLRECAELLHEM 612
Query: 219 KRKNVVPDIFTYNLWIS 235
+ ++PD T+ + +
Sbjct: 613 IGQKLLPDGGTFKILFT 629
>gi|356540375|ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Glycine max]
Length = 1476
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 2/194 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY A++ +Y KAEELF+ ++ +A+ YN ++ + G EKV + EE+
Sbjct: 358 TYNAMISVYGRCARARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEM 417
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
++ D TYN I DQ + +M SG + D V Y L++ AS
Sbjct: 418 VKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMK-SSGRNPDAVTYTVLIDSLGKASK 476
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ A ++ + E + + TY LI YA G +++ ++ + +R + K Y
Sbjct: 477 VEEA-ANVMSEMLDAGVKPTLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDRLAYS 535
Query: 339 CILSSYLMLGHLKE 352
+L +L +K+
Sbjct: 536 VMLDFFLRFNEMKK 549
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 105/251 (41%), Gaps = 5/251 (1%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK-VAL- 213
T + Y A++ +YA K +EL + +++ + + +N ++ M G +E +AL
Sbjct: 248 TVQVYNAMMGVYARNGRFSKVKELLDLMRERGCVPDLVSFNTLINARMKSGAMEPNLALQ 307
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
++ E++R + PDI TYN IS+C+ N+++ +M D W Y ++++Y
Sbjct: 308 LLNEVRRSGIRPDIITYNTLISACSRESNLEEAVAVFSDMESHRCQPDLWT-YNAMISVY 366
Query: 274 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
+ AE E E +TY+ L+ ++ GN +K+ I + +
Sbjct: 367 GRCARARKAE-ELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQD 425
Query: 334 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 393
Y I+ Y G + +I K S + D L+ + E+A
Sbjct: 426 EMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNP-DAVTYTVLIDSLGKASKVEEAANVM 484
Query: 394 MLLLQKNCAPT 404
+L PT
Sbjct: 485 SEMLDAGVKPT 495
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 95/208 (45%), Gaps = 5/208 (2%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
A + +L + A A E+F R +S++ +YN MM +Y G+ KV
Sbjct: 212 APNARMVATILGVLGKANQEALAVEIFARA-ESSVGDTVQVYNAMMGVYARNGRFSKVKE 270
Query: 214 VVEEIKRKNVVPDIFTYNLWISS--CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
+++ ++ + VPD+ ++N I++ + + + + L+E+ SG D + Y L++
Sbjct: 271 LLDLMRERGCVPDLVSFNTLINARMKSGAMEPNLALQLLNEVR-RSGIRPDIITYNTLIS 329
Query: 272 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 331
S+L A + + E Q TY+ +I +Y K ++++K L
Sbjct: 330 ACSRESNLEEA-VAVFSDMESHRCQPDLWTYNAMISVYGRCARARKAEELFKELESKGFF 388
Query: 332 MTSRNYICILSSYLMLGHLKEVGEIIDQ 359
+ Y +L ++ G+ ++V +I ++
Sbjct: 389 PDAVTYNSLLYAFSREGNTEKVRDICEE 416
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 107/236 (45%), Gaps = 8/236 (3%)
Query: 162 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 221
++L LY G + + ++++++ ++L + YN ++ +Y + E+ ++ +++
Sbjct: 954 SILKLYLGIEDFKSMGIIYQKIQDASLKPDEETYNTLIIMYCRDRRPEEGFSLMNKMRSL 1013
Query: 222 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 281
+ P + TY I++ +Q ++ +E+ + G D Y ++ Y T+
Sbjct: 1014 GLEPKLDTYRSLITAFNKQRMYEQAEELFEELRSN-GYKLDRAFYHLMMKTYRTSGDHRK 1072
Query: 282 AESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICIL 341
AE+ + E I + T L++ Y G ++ + + K+LR T + + Y ++
Sbjct: 1073 AENLLAIMKESGI-EPTISTMHLLMVSYGKSGQPEEAENVLKNLRTTGVVLDTLPYSSVI 1131
Query: 342 SSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG-LTEKANEFHMLL 396
+YL G K E + + K++ I +R+ F L+E NE +LL
Sbjct: 1132 DAYLKKGDFKAGIEKLTEMKEAG-----IEPDHRIWTCFIRAATLSEGTNEAIVLL 1182
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
T TY+AL+ YA A E+AEE F +++S + + L Y+ M+ ++ +++K +
Sbjct: 495 TLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDRLAYSVMLDFFLRFNEMKKAMGLY 554
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSG 258
E+ R+ PD Y + + + D V + + +M SG
Sbjct: 555 HEMIREGFTPDNGLYEVMMHALVRENMWDVVDRIIRDMEELSG 597
Score = 44.3 bits (103), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 41/233 (17%), Positives = 90/233 (38%), Gaps = 38/233 (16%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+ + E+A +F ++ + YN M+++Y + K + +E+
Sbjct: 323 TYNTLISACSRESNLEEAVAVFSDMESHRCQPDLWTYNAMISVYGRCARARKAEELFKEL 382
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ K PD TYN + + + N ++V+ +EM G D+
Sbjct: 383 ESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDE---------------- 426
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+TY+ +I +Y G D+ QI++ ++ + + + Y
Sbjct: 427 ---------------------MTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYT 465
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 391
++ S ++E ++ + + + + L+ A++ G E+A E
Sbjct: 466 VLIDSLGKASKVEEAANVMSEMLDAGVKP-TLHTYSALICAYAKAGKREEAEE 517
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
+TY +L+ + + E+AEELFE ++ + + Y+ MM Y + G K ++
Sbjct: 1020 DTYRSLITAFNKQRMYEQAEELFEELRSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAI 1079
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274
+K + P I T +L + S + ++ + L + +G D + Y ++++ Y+
Sbjct: 1080 MKESGIEPTISTMHLLMVSYGKSGQPEEAENVLKNLRT-TGVVLDTLPYSSVIDAYL 1135
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 105/224 (46%), Gaps = 2/224 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L++ Y W ++A + E + Q+NL + YN ++ + G++E+ + +E+
Sbjct: 280 TYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEM 339
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ ++PD+ +YN I+ C I + K L+EMS + G + V + +V Y
Sbjct: 340 ENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMS-EKGVKPNAVTHNIMVKWYCKEGK 398
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ +A S+T+ + E+S +TY+ LI Y GN + + + KM S
Sbjct: 399 MDDA-SNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLN 457
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSD 382
IL + L+E +++ ++ ++S ++G F D
Sbjct: 458 TILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKD 501
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 91/203 (44%), Gaps = 6/203 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +L A +L +K L N YN ++ Y +G +++ A V+E +
Sbjct: 245 TYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELM 304
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ N++PD++TYN+ I+ I++ K DEM + D V Y L+N + S
Sbjct: 305 TQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEME-NLKLLPDVVSYNTLINGCLEWSK 363
Query: 279 LVNAESSTLVE--AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 336
+ +E+ L+E +EK + + +T++ ++ Y G D + +
Sbjct: 364 I--SEAFKLLEEMSEKGV-KPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVT 420
Query: 337 YICILSSYLMLGHLKEVGEIIDQ 359
Y +++ Y G++ E +D+
Sbjct: 421 YNTLINGYCKAGNMGEAFRTMDE 443
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 99/247 (40%), Gaps = 3/247 (1%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
S T +L K E+A +L ++ + + Y ++ Y G V++ + +
Sbjct: 453 SVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWD 512
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
E+K K ++P TYN I +Q L+E+ +SG D Y +++ Y
Sbjct: 513 EMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNEL-LESGLLPDETTYNTILHGYCRE 571
Query: 277 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 336
+ A E S + T + L+ G +K +++ + + + +
Sbjct: 572 GDVEKAFQFHNKMVENSF-KPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVT 630
Query: 337 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 396
Y +++S G L + ++ + ++ D N ++ A +D G +A EF +
Sbjct: 631 YNTLITSLCKEGRLDDAFNLLSEMEEKELGP-DHYTYNAIITALTDSGRIREAEEFMSKM 689
Query: 397 LQKNCAP 403
L+K P
Sbjct: 690 LEKGNLP 696
>gi|297813013|ref|XP_002874390.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297320227|gb|EFH50649.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1027
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 104/243 (42%), Gaps = 24/243 (9%)
Query: 118 KEFVLSDSDYATRIDLMTKVFGIHSGERYFE-----GLPLSAKTSETYTALLHLYAGAKW 172
K L Y T I M + + +E G+P S +TY ++ +Y
Sbjct: 757 KNMALDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSI---QTYNTMISVYGRGLQ 813
Query: 173 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 232
+KA E+F ++S L + +Y M+ Y G++ + + E+++K + P +YN+
Sbjct: 814 LDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKAGKMSEALSLFSEMQKKGIKPGTPSYNM 873
Query: 233 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 292
+ CA + +V + L M +G + Y++L+ Y AESS EAEK
Sbjct: 874 VVKICATSRLHREVDELLQAME-RTGICTESSTYLSLIQAY--------AESSQFAEAEK 924
Query: 293 SIT--QRQWIT-----YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYL 345
+IT Q + I + L+ +A G D+ ++I+ + S IL Y+
Sbjct: 925 TITLMQEKGIPLFHSHFSLLLSAFAKAGMMDEAERIYSKMSEAGISPDSACKRTILKGYM 984
Query: 346 MLG 348
G
Sbjct: 985 SCG 987
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 112/268 (41%), Gaps = 12/268 (4%)
Query: 130 RIDLMTKVF-----GIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVK 184
RI L T V+ + + EG+P TYT ++ YA + E+A F +K
Sbjct: 252 RIILSTSVYNFMLSSLQKNQMVEEGVP---PNEFTYTLVVSSYAKQGFKEEALWAFGEMK 308
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
+ Y+ ++ L + G ++ + E+++ + +VP +T +S T N
Sbjct: 309 SLGFIPEEVTYSSVIGLSVKAGDWDQAVGLYEDMRSRGIVPSNYTCASMLSLYYKTENYP 368
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 304
+ +M + +D+ ++ + ++ IY +A+S E E+ TY
Sbjct: 369 KALSLFADMERNKIPADEVIRGL-IIRIYGKLGLFHDAQS-IFEETERLNLLADEKTYLA 426
Query: 305 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
+ ++ GN K + + ++ ++ YI +L Y + ++ E S
Sbjct: 427 MSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRAL--SN 484
Query: 365 TSDFDISACNRLLGAFSDVGLTEKANEF 392
T D S+CN +L ++ + L EKA F
Sbjct: 485 TGLPDASSCNDMLNLYTRLNLGEKAKGF 512
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 10/125 (8%)
Query: 107 ALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFE-----GLPLSAKTSETYT 161
AL++ E M T ++ LS Y + K+ + E F GLP ++ ++
Sbjct: 440 ALDVIEMMKT-RDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSNTGLPDASSCND--- 495
Query: 162 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 221
+L+LY EKA+ +++ + FN +Y M +Y G V + +V+++ R
Sbjct: 496 -MLNLYTRLNLGEKAKGFIKQITADQVQFNIELYKMAMRVYCKEGMVAEAIELVDKMGRV 554
Query: 222 NVVPD 226
VV D
Sbjct: 555 AVVKD 559
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 105/224 (46%), Gaps = 2/224 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L++ Y W ++A + E + Q+NL + YN ++ + G++E+ + +E+
Sbjct: 280 TYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEM 339
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ ++PD+ +YN I+ C I + K L+EMS + G + V + +V Y
Sbjct: 340 ENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMS-EKGVKPNAVTHNIMVKWYCKEGK 398
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ +A S+T+ + E+S +TY+ LI Y GN + + + KM S
Sbjct: 399 MDDA-SNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLN 457
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSD 382
IL + L+E +++ ++ ++S ++G F D
Sbjct: 458 TILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKD 501
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 91/203 (44%), Gaps = 6/203 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +L A +L +K L N YN ++ Y +G +++ A V+E +
Sbjct: 245 TYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELM 304
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ N++PD++TYN+ I+ I++ K DEM + D V Y L+N + S
Sbjct: 305 TQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEME-NLKLLPDVVSYNTLINGCLEWSK 363
Query: 279 LVNAESSTLVE--AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 336
+ +E+ L+E +EK + + +T++ ++ Y G D + +
Sbjct: 364 I--SEAFKLLEEMSEKGV-KPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVT 420
Query: 337 YICILSSYLMLGHLKEVGEIIDQ 359
Y +++ Y G++ E +D+
Sbjct: 421 YNTLINGYCKAGNMGEAFRTMDE 443
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 99/247 (40%), Gaps = 3/247 (1%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
S T +L K E+A +L ++ + + Y ++ Y G V++ + +
Sbjct: 453 SVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWD 512
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
E+K K ++P TYN I +Q L+E+ +SG D Y +++ Y
Sbjct: 513 EMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNEL-LESGLLPDETTYNTILHGYCRE 571
Query: 277 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 336
+ A E S + T + L+ G +K +++ + + + +
Sbjct: 572 GDVEKAFQFHNKMVENSF-KPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVT 630
Query: 337 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 396
Y +++S G L + ++ + ++ D N ++ A +D G +A EF +
Sbjct: 631 YNTLITSLCKEGRLDDAFNLLSEMEEKELGP-DHYTYNAIITALTDSGRIREAEEFMSKM 689
Query: 397 LQKNCAP 403
L+K P
Sbjct: 690 LEKGXLP 696
>gi|387219093|gb|AFJ69255.1| hypothetical protein NGATSA_2006000, partial [Nannochloropsis
gaditana CCMP526]
Length = 479
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 93/227 (40%), Gaps = 11/227 (4%)
Query: 186 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 245
NL NA+ YN ++T Y + G + V++ + + + PD +T+N I++ A +
Sbjct: 24 GNLKPNAITYNSLLTAYTNAGDMAGAQQVLKRMVQAGLSPDTYTFNTLIAAFVARREVRA 83
Query: 246 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFL 305
+K + M + G D V Y L+ Y T + L + TY++L
Sbjct: 84 AEKMVAYMQ-EHGVLADVVTYSQLLQGYATKEGDMGKAEEVLERMARDGVAPNSYTYNYL 142
Query: 306 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 365
I Y G D + + + +R TS NY ++ +Y + +I+D+ K+
Sbjct: 143 IEGYVKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRMKKEGV 202
Query: 366 SDFDISACNRLLGAFSDVGLTEKANEFHMLLL---------QKNCAP 403
++ L+ A++ G E A +L K+C P
Sbjct: 203 Q-ANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEGGGSKDCEP 248
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY+ L+++YA A AE + R+ + + N + + +MT Y G E LV++ +
Sbjct: 252 TYSTLMNVYARAGLAAGAEGVLTRMTAAGWAPNVITFTTLMTAYSRAGDPEGAELVLKRM 311
Query: 219 KRKNVVPDIFTYNLWISSCA 238
+ V P++ TYN +S+ +
Sbjct: 312 EAAGVSPNVLTYNTLLSATS 331
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 103/238 (43%), Gaps = 11/238 (4%)
Query: 159 TYTALLHLYAGAKW-TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
TY+ LL YA + KAEE+ ER+ + ++ N+ YN ++ Y+ G+++ V+E
Sbjct: 102 TYSQLLQGYATKEGDMGKAEEVLERMARDGVAPNSYTYNYLIEGYVKAGEMDWAEDVLER 161
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
++ + P Y + + + + +K LD M + ++ V + L+N Y
Sbjct: 162 MRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRMKKEGVQANVQV-FTTLMNAYAKRG 220
Query: 278 HLVNAE---SSTLVEAEKSIT-----QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
+ AE + L AE+ + TY L+ +YA G + + +
Sbjct: 221 DVEGAEGVLARMLAVAEEEGGGSKDCEPNVHTYSTLMNVYARAGLAAGAEGVLTRMTAAG 280
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 387
+ ++++Y G E E++ + ++A ++ N LL A S +GL E
Sbjct: 281 WAPNVITFTTLMTAYSRAGD-PEGAELVLKRMEAAGVSPNVLTYNTLLSATSRMGLRE 337
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 95/228 (41%), Gaps = 19/228 (8%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
A S TY L+ Y A + AE++ ER++ L+ ++ Y +M Y
Sbjct: 133 APNSYTYNYLIEGYVKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAYTRRRDARGAEK 192
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC----DSGGSDDWVK---- 265
+++ +K++ V ++ + +++ A +++ + L M + GGS D
Sbjct: 193 ILDRMKKEGVQANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEGGGSKDCEPNVHT 252
Query: 266 YVNLVNIYITASHLVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQI 321
Y L+N+Y A AE +T W IT+ L+ Y+ G+ + + +
Sbjct: 253 YSTLMNVYARAGLAAGAEGVL-----TRMTAAGWAPNVITFTTLMTAYSRAGDPEGAELV 307
Query: 322 WKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD 369
K + Y +LS+ +G L+E GE+ ++ + +D
Sbjct: 308 LKRMEAAGVSPNVLTYNTLLSATSRMG-LRE-GEVEERRAKRVLQVYD 353
>gi|422294671|gb|EKU21971.1| hypothetical protein NGA_2006000, partial [Nannochloropsis gaditana
CCMP526]
Length = 472
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 93/227 (40%), Gaps = 11/227 (4%)
Query: 186 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 245
NL NA+ YN ++T Y + G + V++ + + + PD +T+N I++ A +
Sbjct: 17 GNLKPNAITYNSLLTAYTNAGDMAGAQQVLKRMVQAGLSPDTYTFNTLIAAFVARREVRA 76
Query: 246 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFL 305
+K + M + G D V Y L+ Y T + L + TY++L
Sbjct: 77 AEKMVAYMQ-EHGVLADVVTYSQLLQGYATKEGDMGKAEEVLERMARDGVAPNSYTYNYL 135
Query: 306 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 365
I Y G D + + + +R TS NY ++ +Y + +I+D+ K+
Sbjct: 136 IEGYVKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRMKKEGV 195
Query: 366 SDFDISACNRLLGAFSDVGLTEKANEFHMLLL---------QKNCAP 403
++ L+ A++ G E A +L K+C P
Sbjct: 196 Q-ANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEGGGSKDCEP 241
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY+ L+++YA A AE + R+ + + N + + +MT Y G E LV++ +
Sbjct: 245 TYSTLMNVYARAGLAAGAEGVLTRMTAAGWAPNVITFTTLMTAYSRAGDPEGAELVLKRM 304
Query: 219 KRKNVVPDIFTYNLWISSCA 238
+ V P++ TYN +S+ +
Sbjct: 305 EAAGVSPNVLTYNTLLSATS 324
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 103/238 (43%), Gaps = 11/238 (4%)
Query: 159 TYTALLHLYAGAKW-TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
TY+ LL YA + KAEE+ ER+ + ++ N+ YN ++ Y+ G+++ V+E
Sbjct: 95 TYSQLLQGYATKEGDMGKAEEVLERMARDGVAPNSYTYNYLIEGYVKAGEMDWAEDVLER 154
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
++ + P Y + + + + +K LD M + ++ V + L+N Y
Sbjct: 155 MRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRMKKEGVQANVQV-FTTLMNAYAKRG 213
Query: 278 HLVNAE---SSTLVEAEKSIT-----QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
+ AE + L AE+ + TY L+ +YA G + + +
Sbjct: 214 DVEGAEGVLARMLAVAEEEGGGSKDCEPNVHTYSTLMNVYARAGLAAGAEGVLTRMTAAG 273
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 387
+ ++++Y G E E++ + ++A ++ N LL A S +GL E
Sbjct: 274 WAPNVITFTTLMTAYSRAGD-PEGAELVLKRMEAAGVSPNVLTYNTLLSATSRMGLRE 330
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 95/228 (41%), Gaps = 19/228 (8%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
A S TY L+ Y A + AE++ ER++ L+ ++ Y +M Y
Sbjct: 126 APNSYTYNYLIEGYVKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAYTRRRDARGAEK 185
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC----DSGGSDDWVK---- 265
+++ +K++ V ++ + +++ A +++ + L M + GGS D
Sbjct: 186 ILDRMKKEGVQANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEGGGSKDCEPNVHT 245
Query: 266 YVNLVNIYITASHLVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQI 321
Y L+N+Y A AE +T W IT+ L+ Y+ G+ + + +
Sbjct: 246 YSTLMNVYARAGLAAGAEGVL-----TRMTAAGWAPNVITFTTLMTAYSRAGDPEGAELV 300
Query: 322 WKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD 369
K + Y +LS+ +G L+E GE+ ++ + +D
Sbjct: 301 LKRMEAAGVSPNVLTYNTLLSATSRMG-LRE-GEVEERRAKRVLQVYD 346
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 104/234 (44%), Gaps = 3/234 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+ +LL + E A LF + + + YN ++ GQ++ ++ E+
Sbjct: 293 TFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEM 352
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
RK+++P++ TY+ I A +D+ +EM S G D V Y L++IY
Sbjct: 353 PRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDR-VSYNTLLSIYAKLGR 411
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
A + E E S ++ +TY+ L+ Y G +++ ++++ ++ + Y
Sbjct: 412 FEEA-LNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYS 470
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
++ Y G +E E+ ++K++ D+ + L+ A GL E A F
Sbjct: 471 TLIDVYSKGGLYQEAMEVFREFKKAGLKA-DVVLYSALIDALCKNGLVESAVSF 523
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 104/260 (40%), Gaps = 11/260 (4%)
Query: 130 RIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLS 189
+++L VF E Y T ++AL+ Y + + ++A ++FE +K S L
Sbjct: 200 QVELAKNVFETALNEGY-------GNTVYAFSALISAYGRSGYCDEAIKVFETMKSSGLK 252
Query: 190 FNALMYNEMMTLYMSVG-QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 248
N + YN ++ G + A + +E+ R V PD T+N ++ C + +
Sbjct: 253 PNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARN 312
Query: 249 FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIIL 308
EM G D Y L++ + + + E + +TY +I
Sbjct: 313 LFSEM-LYRGIEQDIFTYNTLLDAVCKGGQM-DLAFQIMSEMPRKHIMPNVVTYSTVIDG 370
Query: 309 YAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDF 368
YA G D+ ++ ++ + +Y +LS Y LG +E + + + S
Sbjct: 371 YAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKK- 429
Query: 369 DISACNRLLGAFSDVGLTEK 388
D N LLG + G E+
Sbjct: 430 DAVTYNALLGGYGKQGKYEE 449
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 1/119 (0%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
K + TY ALL Y E+ + +FE +K + N L Y+ ++ +Y G ++ V
Sbjct: 429 KDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEV 488
Query: 215 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
E K+ + D+ Y+ I + ++ FLDEM+ G + V Y ++++ +
Sbjct: 489 FREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMT-KEGIRPNVVTYNSIIDAF 546
Score = 38.1 bits (87), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 162 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 221
LL Y W + A+ LF+ VKQ + S + YN + + GQ LVV E KR+
Sbjct: 674 GLLMGYGDNVWVQ-AQSLFDEVKQMDSSTASAFYNALTDMLWHFGQRRGAQLVVLEGKRR 732
Query: 222 NVVPDIFTYNLWISSC 237
+V N+W +SC
Sbjct: 733 HV-----WENMWSNSC 743
>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Brachypodium distachyon]
Length = 714
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 91/211 (43%), Gaps = 8/211 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +L++ Y A ++A LF +K++ L L YN ++ Y +G +E + EE+
Sbjct: 372 TYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEM 431
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
++ +PD+ TY + ++ N+ V+ F DEM G D Y ++ +T
Sbjct: 432 TEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEM-LSKGLEPDCFAYNTRISAELTIGA 490
Query: 279 LVNA---ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
+ NA ++ S T +TY+ LI G+ +W + ++
Sbjct: 491 ITNAFQLREEMMLRGISSDT----VTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCV 546
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSATS 366
Y C++ ++ G L E I D S S
Sbjct: 547 TYTCLIHAHCERGRLIEAKNIFDGMVASGLS 577
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 10/189 (5%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +++ A EKA +L + ++ S + +A YN ++T ++ VEK ++ E+
Sbjct: 268 TYNVVINGLARKGELEKAAQLVDIMRLSKKA-SAFTYNPLITGLLARDFVEKAGALLLEM 326
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + +VP + TYN I T N + + DEM G D + Y +L+N Y A +
Sbjct: 327 ENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRA-KGLLPDLITYNSLINGYCKAGN 385
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L A + +++ +TY+ LI Y LG+ + R K++MT + +
Sbjct: 386 LKQA-LCLFGDLKRAGLGPTVLTYNILIDGYCRLGD-------LEGARRLKEEMTEEDCL 437
Query: 339 CILSSYLML 347
+ +Y +L
Sbjct: 438 PDVCTYTIL 446
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 67/165 (40%), Gaps = 2/165 (1%)
Query: 83 GNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLS-DSDYATRIDLMTKVFGIH 141
G + ++ +L K+ R A+ + + M L D Y I+ + + +
Sbjct: 224 GVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELE 283
Query: 142 SGERYFEGLPLSAKTSE-TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMT 200
+ + + LS K S TY L+ + EKA L ++ + + YN ++
Sbjct: 284 KAAQLVDIMRLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLID 343
Query: 201 LYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 245
G E + +E++ K ++PD+ TYN I+ N+ Q
Sbjct: 344 GLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQ 388
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 112/259 (43%), Gaps = 7/259 (2%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
A N+ + EG++ V ++ L K + HAL I M K V Y++ I
Sbjct: 757 AFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAM-AKKRCVPDVVTYSSLI 815
Query: 132 DLMTKVFGIHSGERYFEGLPLSAKTSET--YTALLHLYAGAKWTEKAEELFERVKQSNLS 189
D + K + +FE T Y++L+ + ++A ELFE +++
Sbjct: 816 DSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCP 875
Query: 190 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 249
N + YN +++ G++ ++EE+++ VPD+ TYN+ I +D+ + +
Sbjct: 876 PNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESY 935
Query: 250 LDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA-EKSITQRQWITYDFLIIL 308
M + G D + + +L+ L+ E+ L ++ E+ +TY+ LI +
Sbjct: 936 FKRMK-EKGIVPDVITFTSLIESLGKVDKLL--EACELFDSMEEEGYNPSVVTYNVLIDI 992
Query: 309 YAGLGNKDKIDQIWKSLRM 327
G + I+ +++
Sbjct: 993 LGRAGKVHEAAMIFHEMKV 1011
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 59/111 (53%), Gaps = 2/111 (1%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLP--LSAKTSETYTALLHLYAGAKWTEKAEELFERVK 184
+ ID + K I ++F G+ + TYT L++ A A E+A E+F +K
Sbjct: 325 FTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMK 384
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
++N S +A+ YN ++ G+ + + +E+K + +VP++ TYN+ IS
Sbjct: 385 ENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMIS 435
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 89/210 (42%), Gaps = 16/210 (7%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
++ Y +L L + A +F ++ Q + +A + + + G+++ A +
Sbjct: 251 STNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPI 310
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS---CDSGGSDDWVKYVNLVNI 272
+E+ + + P + T+ + I + + NID+ KF + M C S + V Y LVN
Sbjct: 311 QEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRC----SPNVVTYTTLVNG 366
Query: 273 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 332
A L A VE +++ I Y+ LI GLG + D + +M
Sbjct: 367 LAKAGRLEEA-CEVFVEMKENNCSPDAIAYNTLI---DGLGKAGEADMACGLFK----EM 418
Query: 333 TSRNYICILSSY-LMLGHLKEVGEIIDQWK 361
R + L +Y +M+ L + G + W+
Sbjct: 419 KDRGLVPNLRTYNIMISVLGKAGRQPEAWQ 448
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 82/204 (40%), Gaps = 37/204 (18%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
Y L+ A + A LF+ +K L N YN M+++ G+ + + ++
Sbjct: 394 AYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDL 453
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSG-----------------GSD 261
K + VPD+FTYN I +D+V + EM G G+D
Sbjct: 454 KEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGAD 513
Query: 262 DWVKYVN-------------LVNIYITASHLVNAESSTLVEA-EKSITQRQWITYDFLII 307
V+Y + L++ +I H+ E+ L+E +K +TY L+
Sbjct: 514 RTVEYPSLGFKSLGEITYNTLMSAFIHNGHV--DEAVKLLEVMKKHECIPTVVTYTTLV- 570
Query: 308 LYAGLGNKDKIDQIWKSLR-MTKQ 330
GLG ++D+ LR M KQ
Sbjct: 571 --DGLGKAGRLDEAVSLLREMEKQ 592
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 89/209 (42%), Gaps = 19/209 (9%)
Query: 29 FFYSRFLSSGSSQNECLDEETSNSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATV 88
+F+ +S G + N + +S GK + R + +QR N T
Sbjct: 829 YFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALEL-------FEEMQRRQCPPNIVTY 881
Query: 89 SELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSD---YATRIDLMTKVFGIHSGER 145
+ L L L K+ R L ++E ++ E V D Y ID + K+ + E
Sbjct: 882 NNL---LSGLAKAGR----LNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAES 934
Query: 146 YFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM 203
YF+ + + T+T+L+ +A ELF+ +++ + + + YN ++ +
Sbjct: 935 YFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILG 994
Query: 204 SVGQVEKVALVVEEIKRKNVVPDIFTYNL 232
G+V + A++ E+K K +PD T +
Sbjct: 995 RAGKVHEAAMIFHEMKVKGCMPDGITIGI 1023
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 99/251 (39%), Gaps = 17/251 (6%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+T L+ + ++A + F +K S N + Y ++ G++E+ V E+
Sbjct: 324 TFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEM 383
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K N PD YN I D EM D G + Y ++++ A
Sbjct: 384 KENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMK-DRGLVPNLRTYNIMISVLGKAGR 442
Query: 279 LVNAESSTLV-EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
E+ L + ++ TY+ LI + G DK+ I K +M +
Sbjct: 443 --QPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIK-------EMVEKGG 493
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSATSDF----DISACNRLLGAFSDVGLTEKANEFH 393
CI+S GH + E D+ + + F +I+ N L+ AF G ++A +
Sbjct: 494 ECIISRDSNAGHEGTI-EGADRTVEYPSLGFKSLGEITY-NTLMSAFIHNGHVDEAVKLL 551
Query: 394 MLLLQKNCAPT 404
++ + C PT
Sbjct: 552 EVMKKHECIPT 562
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 110/256 (42%), Gaps = 25/256 (9%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE-- 216
TY+ +++ + ++A ++F R+K+ + L+ N TL S+ + EK+ ++
Sbjct: 635 TYSLVINCLCKSDDVDQALDVFGRMKEEGME--PLLGN-YKTLLSSLVKDEKIDFALQIF 691
Query: 217 -EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275
E++ ++VPD F YN+ ++ + +D+ K +D M K N++ T
Sbjct: 692 NELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSM-----------KNQNILPDLFT 740
Query: 276 ASHLVN--AESSTLVEAEKSITQRQWITYDFLIILYAG----LGNKDKIDQIWKSLRMTK 329
+ L++ +S L EA T+ ++ ++ Y LG K+ R
Sbjct: 741 YTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMA 800
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDF--DISACNRLLGAFSDVGLTE 387
+K + + S LG V E ++ S + ++ + L+ +F G+ +
Sbjct: 801 KKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVD 860
Query: 388 KANEFHMLLLQKNCAP 403
+A E + ++ C P
Sbjct: 861 RALELFEEMQRRQCPP 876
>gi|449457829|ref|XP_004146650.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 222
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 59/131 (45%), Gaps = 33/131 (25%)
Query: 55 KDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWM 114
KD L RI + P S T ++ +WV E ELRHI+KELR +R+KHALE+
Sbjct: 28 KDSLYRRISPVGDPNISVTPLLDQWVLESGLVQQDELRHIIKELRVYKRFKHALEV---- 83
Query: 115 VTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE 174
E YF +P K + + ALL+ YA K+ +
Sbjct: 84 -----------------------------EDYFNNMPSQLKRCQVHIALLNCYAHEKYAD 114
Query: 175 KAEELFERVKQ 185
KA + +++K+
Sbjct: 115 KANAVLQKIKE 125
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 97/245 (39%), Gaps = 38/245 (15%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY AL++ + ++A ++F VK MYN ++ Y +G+++ + EE+
Sbjct: 368 TYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEM 427
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+R+ +VPD+ TYN I+ NI+ KK D+++ S G D V
Sbjct: 428 EREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLT--SKGLPDLV-------------- 471
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
T+ L+ Y G K + K + K Y
Sbjct: 472 ----------------------TFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYN 509
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
++ Y G+LK + Q ++ ++++ N LL +S G E AN +L+
Sbjct: 510 IVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLE 569
Query: 399 KNCAP 403
K P
Sbjct: 570 KGLVP 574
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
Query: 163 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 222
L+ YA E E F+R +AL +M + + V V +E+ R+
Sbjct: 159 LVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRK 218
Query: 223 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
+ P++FT+N+ I++ T +++ + +++M G S + V Y L++ Y
Sbjct: 219 IQPNVFTFNVVINALCKTGKMNKARDVMEDMKV-YGCSPNVVSYNTLIDGY 268
>gi|297835316|ref|XP_002885540.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331380|gb|EFH61799.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 841
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 136/284 (47%), Gaps = 11/284 (3%)
Query: 132 DLMTKVFGI-HSGER---YFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQ 185
++M K +GI S E+ FE + T + TY L+ + A A +KA+ E++++
Sbjct: 508 NVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPDKAKCYLEKMRE 567
Query: 186 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 245
+ + + Y +++ ++ +GQ+ V +E+ N+ PD+ Y + I++ A T N+ Q
Sbjct: 568 TGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQ 627
Query: 246 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES--STLVEAEKSITQRQWITYD 303
+++ M ++G ++ V Y +L+ +Y +L AE+ L+ + T +
Sbjct: 628 AMSYVEAMK-EAGIPENSVIYNSLIKLYTKVGYLDEAEAIYRKLLRSCNETQYPDVYTSN 686
Query: 304 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 363
+I LY+ K + I++S++ +++ + +L Y G +E +I Q ++
Sbjct: 687 CMINLYSQRSMVRKAEAIFESMKQ-RREANEFTFAMMLCMYKKNGRFEEATQIAKQMREM 745
Query: 364 ATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
+S N +LG ++ G ++A E ++ P +++
Sbjct: 746 RILTDPLSY-NSVLGLYALDGRFKEAVETFKEMVSSGIQPDDST 788
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 103/245 (42%), Gaps = 6/245 (2%)
Query: 122 LSDSDYATRIDLMTKVFGIHSGERYFEGL-PLSAKTSETYTALLHLYAGAKWTEKAEELF 180
+S Y+ ID + + ER F ++ +T Y ++ Y +K EKA ELF
Sbjct: 468 MSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVLEYNVMIKAYGISKSCEKACELF 527
Query: 181 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 240
E + ++ + YN ++ + S +K +E+++ V D Y ISS
Sbjct: 528 ESMMSYGVTPDKCTYNTLVQILASADMPDKAKCYLEKMRETGYVSDCIPYCAVISSFVKL 587
Query: 241 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI 300
++ ++ EM + D V Y L+N + ++ A S E I + +
Sbjct: 588 GQLNMAEEVYKEM-VEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPENS-V 645
Query: 301 TYDFLIILYAGLGNKDKIDQIW-KSLRMTKQKMTSRNYI--CILSSYLMLGHLKEVGEII 357
Y+ LI LY +G D+ + I+ K LR + Y C+++ Y +++ I
Sbjct: 646 IYNSLIKLYTKVGYLDEAEAIYRKLLRSCNETQYPDVYTSNCMINLYSQRSMVRKAEAIF 705
Query: 358 DQWKQ 362
+ KQ
Sbjct: 706 ESMKQ 710
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 89/199 (44%), Gaps = 8/199 (4%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
+S TY ++ Y + ++A E F+R+ + + + +N M+ +Y + GQ +V ++
Sbjct: 296 SSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHVYGNNGQFGEVTSLM 355
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275
+ +K + PD TYN+ IS +I++ + EM +G D V Y L+ + +
Sbjct: 356 KTMKF-HCAPDTRTYNILISLHTKNNDIERAGTYFKEMK-GAGLKPDPVSYRTLLYAF-S 412
Query: 276 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM--TKQKMT 333
H+V + E + + + T L +Y + +++ W + M+
Sbjct: 413 IRHMVKEAEELIAEMDDNDVEIDEYTQSALTRMYI---EAEMLEKSWSWFKRFHVAGNMS 469
Query: 334 SRNYICILSSYLMLGHLKE 352
S Y + +Y G+L E
Sbjct: 470 SEGYSANIDAYGERGYLSE 488
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 71/149 (47%), Gaps = 9/149 (6%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKV-FGIHSGERYFEGLPL 152
+L+ L K+ ++++ + + M+ K +S Y T ID+ +K +H+ + +
Sbjct: 192 MLRILGKACKWRYVQSLWDEMI-RKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKI 250
Query: 153 SAKTSETYTAL-LHLYAGAKWTEKAEELF------ERVKQSNLSFNALMYNEMMTLYMSV 205
+ E T + L +Y A+ +KAEE F E S++ ++ YN M+ Y
Sbjct: 251 GMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKS 310
Query: 206 GQVEKVALVVEEIKRKNVVPDIFTYNLWI 234
GQ+++ + + + + +VP T+N I
Sbjct: 311 GQIKEASETFKRMLEEGIVPTTVTFNTMI 339
>gi|254939549|ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays]
gi|218684531|gb|ACL01094.1| chloroplast pentatricopeptide repeat protein 10 [Zea mays]
gi|223948163|gb|ACN28165.1| unknown [Zea mays]
gi|413943497|gb|AFW76146.1| pentatricopeptide repeat10 [Zea mays]
Length = 786
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 102/215 (47%), Gaps = 3/215 (1%)
Query: 151 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-E 209
P S YT +LH + A E+A ELF +++ ++ + YN ++ +Y +G+
Sbjct: 168 PGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWP 227
Query: 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
++ +++E++ V PD FT + I++C +D+ F +++ G + V Y L
Sbjct: 228 RIVALLDEMRAAGVEPDGFTASTVIAACCRDGLVDEAVAFFEDLKA-RGHAPCVVTYNAL 286
Query: 270 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
+ ++ A + A L E E++ Q +TY+ L YA G ++ + ++
Sbjct: 287 LQVFGKAGNYTEA-LRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMASKG 345
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
+ Y ++++Y +G + E + DQ K++
Sbjct: 346 LLPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTG 380
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 88/194 (45%), Gaps = 25/194 (12%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L YA A + E+A + + L NA YN +MT Y +VG+V++ + +++
Sbjct: 317 TYNELAGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTAYGNVGKVDEALALFDQM 376
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI------ 272
K+ VP++ TYNL + + + L EMS SG + + V + ++ +
Sbjct: 377 KKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMS-RSGCTPNRVTWNTMLAVCGKRGM 435
Query: 273 --YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 330
Y+T ++ S VE + TY+ LI Y G++ +++
Sbjct: 436 EDYVT--RVLEGMRSCGVELSRD-------TYNTLIAAYGRCGSRTNAFKMY-------N 479
Query: 331 KMTSRNYICILSSY 344
+MTS + +++Y
Sbjct: 480 EMTSAGFTPCITTY 493
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 84/190 (44%), Gaps = 2/190 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY ALL ++ A +A + ++Q+ +A+ YNE+ Y G E+ A ++ +
Sbjct: 282 TYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTM 341
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K ++P+ FTYN +++ +D+ D+M G V NLV +
Sbjct: 342 ASKGLLPNAFTYNTVMTAYGNVGKVDEALALFDQMK--KTGFVPNVNTYNLVLGMLGKKS 399
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L E +S +T++ ++ + G +D + ++ + +R +++ Y
Sbjct: 400 RFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYN 459
Query: 339 CILSSYLMLG 348
++++Y G
Sbjct: 460 TLIAAYGRCG 469
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 1/136 (0%)
Query: 177 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 236
E F+ VK + + +++N M+++Y G K V + IKR + PD+ TYN +
Sbjct: 581 ETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMDM 640
Query: 237 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 296
A + +K L+++ C D V Y ++N + LV L E
Sbjct: 641 YAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQG-LVKEAQRVLSEMVADGMA 699
Query: 297 RQWITYDFLIILYAGL 312
+TY L+ Y+ L
Sbjct: 700 PCAVTYHTLVGGYSSL 715
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 59/115 (51%), Gaps = 2/115 (1%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
+ ++L +YA KA E+F+ +K+S LS + + YN +M +Y + + ++ ++K
Sbjct: 599 FNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLK 658
Query: 220 -RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
+ + PD+ +YN I+ + + ++ L EM D G + V Y LV Y
Sbjct: 659 CSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSEMVAD-GMAPCAVTYHTLVGGY 712
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/246 (17%), Positives = 95/246 (38%), Gaps = 1/246 (0%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
+TY L+ Y A +++ + + + YN ++ + G +V +
Sbjct: 456 DTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSK 515
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
++ K P+ +Y+L + A N+ + +E+ WV LV
Sbjct: 516 MRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLVIANFKCR 575
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
L E++ E + + ++ ++ +YA G K +++ S++ + Y
Sbjct: 576 RLDGMETA-FQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITY 634
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 397
++ Y E +I++Q K S T D+ + N ++ F GL ++A ++
Sbjct: 635 NSLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSEMV 694
Query: 398 QKNCAP 403
AP
Sbjct: 695 ADGMAP 700
>gi|15240478|ref|NP_198079.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635757|sp|O04647.2|PP399_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g27270; AltName: Full=Protein EMBRYO DEFECTIVE 976
gi|332006282|gb|AED93665.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1038
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 17/183 (9%)
Query: 118 KEFVLSDSDYATRIDLMTKVFGIHSGERYFE-----GLPLSAKTSETYTALLHLYAGAKW 172
K L Y T I M + + +E G+P S +TY ++ +Y
Sbjct: 768 KNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSI---QTYNTMISVYGRGLQ 824
Query: 173 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 232
+KA E+F ++S L + +Y M+ Y G++ + + E+++K + P +YN+
Sbjct: 825 LDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNM 884
Query: 233 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 292
+ CA + +V + L M +G D Y+ L+ +Y AESS EAEK
Sbjct: 885 MVKICATSRLHHEVDELLQAME-RNGRCTDLSTYLTLIQVY--------AESSQFAEAEK 935
Query: 293 SIT 295
+IT
Sbjct: 936 TIT 938
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 106/245 (43%), Gaps = 7/245 (2%)
Query: 148 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 207
EG+P TYT ++ YA + E+A + F +K + Y+ +++L + G
Sbjct: 287 EGVP---PNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGD 343
Query: 208 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 267
EK + E+++ + +VP +T +S T N + +M + +D+ ++ +
Sbjct: 344 WEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGL 403
Query: 268 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 327
++ IY +A+S E E+ TY + ++ GN K + + ++
Sbjct: 404 -IIRIYGKLGLFHDAQS-MFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKT 461
Query: 328 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 387
++ YI +L Y + ++ E S T D S+CN +L ++ + L E
Sbjct: 462 RDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRAL--SKTGLPDASSCNDMLNLYTRLNLGE 519
Query: 388 KANEF 392
KA F
Sbjct: 520 KAKGF 524
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 102/235 (43%), Gaps = 5/235 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY++++H A+ +KAE ++ + + YN ++ Y S GQ ++ V +E+
Sbjct: 258 TYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEM 317
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+R++++PD+ N + S I + + D M+ G + D Y ++N Y T
Sbjct: 318 RRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAM-KGQNPDVFSYTIMLNGYATKGC 376
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
LV+ + I + T++ LI YA G DK I+ +R K Y+
Sbjct: 377 LVDMTDLFDLMLGDGIAPDIY-TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYM 435
Query: 339 CILSSYLMLGHLKEVGEIIDQW-KQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
++++ +G + + E +Q Q D C L+ F G KA E
Sbjct: 436 TVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHC--LIQGFCTHGSLLKAKEL 488
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 105/238 (44%), Gaps = 15/238 (6%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSN--LSFNALMYNEMMTLYMSVGQVEKVALVVE 216
+Y LL + +A++L + + S + + YN ++ + G V K + +
Sbjct: 186 SYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFK 245
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
E+ ++ + PD+ TY+ + + +D+ + FL +M D+W Y NL+ Y +
Sbjct: 246 EMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWT-YNNLIYGYSST 304
Query: 277 SHLVNAESSTLVEAEKSITQRQWITYDFLII--LYAGLGNKDKIDQ---IWKSLRMTKQK 331
A V K + +RQ I D + + L L KI + ++ ++ M Q
Sbjct: 305 GQWKEA-----VRVFKEM-RRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQN 358
Query: 332 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
+Y +L+ Y G L ++ ++ D + DI N L+ A+++ G+ +KA
Sbjct: 359 PDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAP-DIYTFNVLIKAYANCGMLDKA 415
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 101/250 (40%), Gaps = 12/250 (4%)
Query: 148 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 207
+G + + TS TY L+ A E A F ++ ++ L +A++ + ++ + +
Sbjct: 104 QGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKR 163
Query: 208 V-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG---SDDW 263
E + +++ VPD+F+YN+ + S Q L M+ GG S D
Sbjct: 164 TDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMA--EGGTVCSPDV 221
Query: 264 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 323
V Y +++ + VN E + +TY ++ DK + +
Sbjct: 222 VAYNTVIDGFFKEGD-VNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLR 280
Query: 324 SLRMTKQKMTSRN--YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFS 381
+M + + N Y ++ Y G KE + + ++ + D+ A N L+G+
Sbjct: 281 --QMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILP-DVVALNTLMGSLC 337
Query: 382 DVGLTEKANE 391
G ++A +
Sbjct: 338 KYGKIKEARD 347
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 50/291 (17%), Positives = 123/291 (42%), Gaps = 17/291 (5%)
Query: 70 RSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKE------FVLS 123
+ A V + + V L ++ L K + K A ++ + M + + +
Sbjct: 308 KEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIM 367
Query: 124 DSDYATRIDL--MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFE 181
+ YAT+ L MT +F + G+ G+ A T+ L+ YA +KA +F
Sbjct: 368 LNGYATKGCLVDMTDLFDLMLGD----GI---APDIYTFNVLIKAYANCGMLDKAMIIFN 420
Query: 182 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL 241
++ + + + Y ++ +G+++ ++ + VVPD + Y+ I
Sbjct: 421 EMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHG 480
Query: 242 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWIT 301
++ + K+ + E+ ++G D V + +++N +++A++ + + +
Sbjct: 481 SLLKAKELISEIM-NNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGL-HPDAVV 538
Query: 302 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 352
Y+ L+ Y +G +K +++ ++ + Y +++ Y +G + E
Sbjct: 539 YNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDE 589
>gi|115462947|ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|50878350|gb|AAT85125.1| unknown protein, contains pentatricopeptide (PPR) repeat, PF01535
[Oryza sativa Japonica Group]
gi|113578624|dbj|BAF16987.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|215695094|dbj|BAG90285.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 793
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 127/287 (44%), Gaps = 22/287 (7%)
Query: 89 SELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYA--TRIDLMTKVFGIHSGER- 145
S+L +LK L S ++ AL + W SD A ++++ + G G+
Sbjct: 111 SDLPSLLKALELSGHWEWALALLRWA--------SDEGAADAAALEMVVRALG-REGQHD 161
Query: 146 ----YFEGLPLSAKTS---ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEM 198
+ +PL + YT +LH + A E+A +LF +++ + + YN +
Sbjct: 162 VVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVV 221
Query: 199 MTLYMSVGQV-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 257
+ +Y +G+ ++ ++EE++ V PD FT + I++C +DQ F +++
Sbjct: 222 LDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKA-R 280
Query: 258 GGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 317
G V Y L+ ++ A + A L E E S Q +TY+ L YA G ++
Sbjct: 281 GHVPCVVTYNALLQVFGKAGNYTEA-LRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEE 339
Query: 318 IDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
+ ++ + Y ++++Y +G + E + D+ K++
Sbjct: 340 AAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNG 386
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 106/252 (42%), Gaps = 9/252 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY ALL ++ A +A + + ++ S +A+ YNE+ Y G E+ A ++ +
Sbjct: 288 TYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTM 347
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI---YIT 275
K ++P+ FTYN +++ A +D+ D M + +V VN N+ +
Sbjct: 348 TSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMK-----KNGYVPNVNTYNLIFGMLG 402
Query: 276 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
A L E +S +T++ ++ + G +D + ++ ++ +++
Sbjct: 403 KKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRD 462
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 395
Y ++S+Y G ++ D+ S + ++ N LL S G A
Sbjct: 463 TYNTLISAYGRCGSRTYAFKMYDEMISSGFTPC-LTTYNALLNVLSRQGDWSTAQSIVSK 521
Query: 396 LLQKNCAPTNAS 407
+L+ P + S
Sbjct: 522 MLKNGFKPNDQS 533
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
+ ++L +YA KA E+F+ +KQS LS + + YN +M +Y + + +++++K
Sbjct: 604 FNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLK 663
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275
V PD+ +YN I+ I + ++ L EM D G + V Y LV Y +
Sbjct: 664 SSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIAD-GMAPCVVTYHTLVGGYAS 718
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 59/139 (42%), Gaps = 2/139 (1%)
Query: 174 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 233
E E+ F+ VK + +++N M+ +Y G K + + IK+ + PD+ TYN
Sbjct: 583 EGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSL 642
Query: 234 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 293
+ A + + +K L ++ S D V Y ++N + L+ L E
Sbjct: 643 MDMYAKSNESWEAEKILKQLK-SSQVKPDVVSYNTVINGFCKQG-LIKEAQRILSEMIAD 700
Query: 294 ITQRQWITYDFLIILYAGL 312
+TY L+ YA L
Sbjct: 701 GMAPCVVTYHTLVGGYASL 719
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/95 (18%), Positives = 52/95 (54%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +L+ +YA + + +AE++ +++K S + + + YN ++ + G +++ ++ E+
Sbjct: 638 TYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEM 697
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
+ P + TY+ + A+ ++ ++ ++ M
Sbjct: 698 IADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYM 732
>gi|356575482|ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Glycine max]
Length = 576
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 109/251 (43%), Gaps = 9/251 (3%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
T+ETYT L++LY A + A +LF + + N Y ++ + G EK V
Sbjct: 259 TTETYTMLINLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAREGLCEKAEEVF 318
Query: 216 EEIKRKNVVPDIFTYNLWI---SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 272
E+++ + PD++ YN + S ++ + M C+ D Y LV+
Sbjct: 319 EQMQEAGLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEP----DRASYNILVDA 374
Query: 273 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 332
Y A +AE + + ++ ++ L+ Y+ +G+ +K ++I + + K+
Sbjct: 375 YGKAGFQDDAE-AVFKDMKRVGITPTMKSHMVLLSAYSKMGSVNKCEEILNQMCKSGLKL 433
Query: 333 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
+ +L+ Y LG ++ E++ + + + DIS N L+ + G E+ +
Sbjct: 434 DTYVLNSMLNLYGRLGQFGKMEEVL-RVMEKGSYVADISTYNILINRYGQAGFIERMEDL 492
Query: 393 HMLLLQKNCAP 403
LL K P
Sbjct: 493 FQLLPSKGLKP 503
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 66/334 (19%), Positives = 134/334 (40%), Gaps = 44/334 (13%)
Query: 97 ELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAK- 155
+LR +++ + I W++ F Y I+ + E + L L A+
Sbjct: 128 QLRMRKQWDSIISICRWILLRSSFKPDVICYNLLIEAFGQKLLYKEAESTYLQL-LEARC 186
Query: 156 --TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
T +TY L+ Y + EKAE +F ++ L +A++YN + M G +K
Sbjct: 187 IPTEDTYALLIKAYCISGLLEKAEAVFAEMRNYGLPSSAVVYNAYINGLMKGGNSDKAEE 246
Query: 214 VVEEIKR-----------------------------------KNVVPDIFTYNLWISSCA 238
+ + +K+ + P+I TY +++ A
Sbjct: 247 IFKRMKKDACKPTTETYTMLINLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFA 306
Query: 239 ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN-AESSTLVEAEKSITQR 297
++ ++ ++M ++G D Y L+ Y A + AE +L++ R
Sbjct: 307 REGLCEKAEEVFEQMQ-EAGLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDR 365
Query: 298 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 357
+Y+ L+ Y G +D + ++K ++ T ++++ +LS+Y +G + + EI+
Sbjct: 366 A--SYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLLSAYSKMGSVNKCEEIL 423
Query: 358 DQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 391
+Q +S D N +L + +G K E
Sbjct: 424 NQMCKSGLK-LDTYVLNSMLNLYGRLGQFGKMEE 456
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 81/223 (36%), Gaps = 38/223 (17%)
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKK-FLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
R + PD+ YNL I + L + + +L + ++D Y L+ Y +
Sbjct: 148 RSSFKPDVICYNLLIEAFGQKLLYKEAESTYLQLLEARCIPTED--TYALLIKAYCISGL 205
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L AE+ E + Y+ I GN DK ++I+K ++ K T+ Y
Sbjct: 206 LEKAEA-VFAEMRNYGLPSSAVVYNAYINGLMKGGNSDKAEEIFKRMKKDACKPTTETYT 264
Query: 339 CILSSYL--------------MLGH--------------------LKEVGEIIDQWKQSA 364
+++ Y M+ H L E E + + Q A
Sbjct: 265 MLINLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEA 324
Query: 365 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
+ D+ A N L+ A+S G A E L+ C P AS
Sbjct: 325 GLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRAS 367
>gi|125551633|gb|EAY97342.1| hypothetical protein OsI_19265 [Oryza sativa Indica Group]
Length = 793
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 127/287 (44%), Gaps = 22/287 (7%)
Query: 89 SELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYA--TRIDLMTKVFGIHSGER- 145
S+L +LK L S ++ AL + W SD A ++++ + G G+
Sbjct: 111 SDLPSLLKALELSGHWEWALALLRWA--------SDEGAADAAALEMVVRALG-REGQHD 161
Query: 146 ----YFEGLPLSAKTS---ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEM 198
+ +PL + YT +LH + A E+A +LF +++ + + YN +
Sbjct: 162 VVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVV 221
Query: 199 MTLYMSVGQV-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 257
+ +Y +G+ ++ ++EE++ V PD FT + I++C +DQ F +++
Sbjct: 222 LDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKA-R 280
Query: 258 GGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 317
G V Y L+ ++ A + A L E E S Q +TY+ L YA G ++
Sbjct: 281 GHVPCVVTYNALLQVFGKAGNYTEA-LRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEE 339
Query: 318 IDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
+ ++ + Y ++++Y +G + E + D+ K++
Sbjct: 340 AAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNG 386
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 106/252 (42%), Gaps = 9/252 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY ALL ++ A +A + + ++ S +A+ YNE+ Y G E+ A ++ +
Sbjct: 288 TYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTM 347
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI---YIT 275
K ++P+ FTYN +++ A +D+ D M + +V VN N+ +
Sbjct: 348 TSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMK-----KNGYVPNVNTYNLIFGMLG 402
Query: 276 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
A L E +S +T++ ++ + G +D + ++ ++ +++
Sbjct: 403 KKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRD 462
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 395
Y ++S+Y G ++ D+ S + ++ N LL S G A
Sbjct: 463 TYNTLISAYGRCGSRTYAFKMYDEMISSGFTPC-LTTYNALLNVLSRQGDWSTAQSIVSK 521
Query: 396 LLQKNCAPTNAS 407
+L+ P + S
Sbjct: 522 MLKNGFKPNDQS 533
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
+ ++L +YA KA E+F+ +KQS LS + + YN +M +Y + + +++++K
Sbjct: 604 FNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLK 663
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275
V PD+ +YN I+ I + ++ L EM D G + V Y LV Y +
Sbjct: 664 SSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIAD-GMAPCVVTYHTLVGGYAS 718
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 59/139 (42%), Gaps = 2/139 (1%)
Query: 174 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 233
E E+ F+ VK + +++N M+ +Y G K + + IK+ + PD+ TYN
Sbjct: 583 EGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSL 642
Query: 234 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 293
+ A + + +K L ++ S D V Y ++N + L+ L E
Sbjct: 643 MDMYAKSNESWEAEKILKQLK-SSQVKPDVVSYNTVINGFCKQG-LIKEAQRILSEMIAD 700
Query: 294 ITQRQWITYDFLIILYAGL 312
+TY L+ YA L
Sbjct: 701 GMAPCVVTYHTLVGGYASL 719
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/95 (18%), Positives = 52/95 (54%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +L+ +YA + + +AE++ +++K S + + + YN ++ + G +++ ++ E+
Sbjct: 638 TYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEM 697
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
+ P + TY+ + A+ ++ ++ ++ M
Sbjct: 698 IADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYM 732
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 140/340 (41%), Gaps = 9/340 (2%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
A +++ V +G + +L K + A ++ M+ K V + Y T I
Sbjct: 344 AIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMI-QKGCVPNVVSYNTVI 402
Query: 132 DLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLS 189
+ K +H G E + + + T+ ++ + A ELF +++S +
Sbjct: 403 AGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCT 462
Query: 190 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRK-NVVPDIFTYNLWISSCAATLNIDQVKK 248
N + YN ++ + ++ ++ E+ RK PDI TYN I + +D+ K
Sbjct: 463 PNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYK 522
Query: 249 FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIIL 308
+M D DD V Y ++V + ++ ++ L K+ ITY LI
Sbjct: 523 LFLQMLSDGLAPDD-VTY-SIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDG 580
Query: 309 YAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYL-MLGHLKEVGEIIDQWKQSATSD 367
+ GN DK +I + L ++K I +L G L++ GE+++ ++
Sbjct: 581 FCKTGNLDKALEILQ-LLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVP 639
Query: 368 FDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
D N LL F D TE A + ++ Q C P NA+
Sbjct: 640 -DTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNAT 678
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 110/276 (39%), Gaps = 16/276 (5%)
Query: 139 GIHSGERYFEGLPLSAKTSE---------TYTALLHLYAGAKWTEKAEELFERVKQSNLS 189
G+ SG + L L + E TY+ ++ + + A L E + S
Sbjct: 193 GLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCS 252
Query: 190 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 249
N + Y+ ++ G++++ +++ + R P+I TYN I ID+
Sbjct: 253 PNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHL 312
Query: 250 LDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILY 309
L+EM D G + V Y L++ + +A V EK + TY+ L+ ++
Sbjct: 313 LEEMV-DGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLF-TYNSLLDMF 370
Query: 310 AGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDF- 368
KD++++ + L QK N + + L +V E + +Q +++
Sbjct: 371 C---KKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCV 427
Query: 369 -DISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
DI N ++ A + A E L+ + C P
Sbjct: 428 PDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTP 463
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 78/373 (20%), Positives = 137/373 (36%), Gaps = 48/373 (12%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
A +++ VS+G V +L L K+ + A + + M T + Y T I
Sbjct: 239 ACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRM-TRSGCSPNIVTYNTII 297
Query: 132 DLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLS 189
D K+ I E + TYT LL + E A L E + +
Sbjct: 298 DGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYV 357
Query: 190 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 249
N YN ++ ++ +VE+ ++ + +K VP++ +YN I+ + +
Sbjct: 358 PNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLL 417
Query: 250 LDEM---SC-------------------------------DSGGSDDWVKYVNLVNIYIT 275
L++M +C +SG + + V Y +LV+
Sbjct: 418 LEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCK 477
Query: 276 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS-LRMTKQKMTS 334
+ AE K ITY+ +I GL ++D+ +K L+M +
Sbjct: 478 SRRFDQAEYLLREMTRKQGCSPDIITYNTVI---DGLCKSKRVDRAYKLFLQMLSDGLAP 534
Query: 335 RN--YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC--NRLLGAFSDVGLTEKAN 390
+ Y ++SS + E +++ ++ FD A L+ F G +KA
Sbjct: 535 DDVTYSIVISSLCKWRFMDEANNVLELMLKNG---FDPGAITYGTLIDGFCKTGNLDKAL 591
Query: 391 EFHMLLLQKNCAP 403
E LLL K P
Sbjct: 592 EILQLLLSKGSYP 604
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 49/255 (19%), Positives = 107/255 (41%), Gaps = 18/255 (7%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
S TY +++ + + + A L E + + + N YN ++ + +VE ++E
Sbjct: 44 SVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLE 103
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
++ + PD+ +Y I+ +D+ + +D+M G + + Y LV+ +
Sbjct: 104 QMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMI-QRGCQPNVITYGTLVDGFCRV 162
Query: 277 SHLVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKID---QIWKSLRMTK 329
L A VE + +T+R + ITY+ ++ GL + K+D Q++K + +
Sbjct: 163 GDLDGA-----VELVRKMTERGYRPNAITYNNIM---HGLCSGRKLDSALQLFKEMEESG 214
Query: 330 QKMTSR-NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEK 388
Y I+ S + G + + +++ S ++ + LL G ++
Sbjct: 215 SCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSP-NVVTYSSLLHGLCKAGKLDE 273
Query: 389 ANEFHMLLLQKNCAP 403
A + + C+P
Sbjct: 274 ATALLQRMTRSGCSP 288
>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 606
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 97/202 (48%), Gaps = 4/202 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +L++ + ++A ++F+ VK MYN ++ Y +G+++ + EE+
Sbjct: 368 TYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEM 427
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+R+ +VPD+ TYN I+ NI+ KK D+++ + G D V + L+ Y +
Sbjct: 428 EREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLT--NKGLPDLVTFHILMEGYCSRGE 485
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ-KMTSRNY 337
A + L E K + + +TY+ ++ Y GN + + ++ +M +Y
Sbjct: 486 SRKA-AMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASY 544
Query: 338 ICILSSYLMLGHLKEVGEIIDQ 359
+L Y G L++ ++++
Sbjct: 545 NVLLQGYSQKGKLEDANMLLNE 566
Score = 38.1 bits (87), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 97/252 (38%), Gaps = 17/252 (6%)
Query: 159 TYTALLH-LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
TY +L++ L G K E A + +++ + + N + Y+ ++ + G +++ + +
Sbjct: 333 TYNSLINGLCNGGKINE-AIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDS 391
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
+K + P YN+ I + ID +EM + V V N I
Sbjct: 392 VKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEME-----REGIVPDVGTYNCLIAGL 446
Query: 278 HLVNAESSTLVEAEKSITQ------RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 331
+ + A+K Q +T+ L+ Y G K + K + K
Sbjct: 447 ----CRNGNIEAAKKLFDQLTNKGLPDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLK 502
Query: 332 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 391
Y ++ Y G+LK + Q ++ ++++ N LL +S G E AN
Sbjct: 503 PRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANM 562
Query: 392 FHMLLLQKNCAP 403
+L+K P
Sbjct: 563 LLNEMLEKGLVP 574
Score = 37.7 bits (86), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
Query: 163 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 222
L+ YA E E F+R +A+ +M + + V + +E+ R+
Sbjct: 159 LVLAYANNSRFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRK 218
Query: 223 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
+ P++FT+N+ I++ T +++ + +++M G S + V Y L++ Y
Sbjct: 219 IQPNVFTFNVVINALCKTGKMNKARDVMEDMKV-YGYSPNVVSYNTLIDGY 268
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 101/234 (43%), Gaps = 3/234 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY++++H A+ KAE ++ + + YN ++ Y S GQ ++ V +E+
Sbjct: 260 TYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEM 319
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+R +++PD+ T N+ + S I + + D M+ G + D Y ++N Y T
Sbjct: 320 RRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAM-KGQNPDVFSYKIMLNGYATKGC 378
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
LV+ + I + T+ LI YA G DK I+ +R K Y
Sbjct: 379 LVDMTDLFDLMLGDGIAPDIY-TFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYT 437
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
++++ +G + + E +Q + D A + L+ F G KA E
Sbjct: 438 TVIAALCRIGKMDDAMEKFNQMIDQGVAP-DKYAYHCLIQGFCTHGSLLKAKEL 490
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 44/233 (18%), Positives = 98/233 (42%), Gaps = 5/233 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSN--LSFNALMYNEMMTLYMSVGQVEKVALVVE 216
+Y+ LL + +A++L + + S + + Y ++ + G V K + +
Sbjct: 188 SYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFK 247
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
E+ ++ + PD+ TY+ + + + + + FL +M D+W Y NL+ Y +
Sbjct: 248 EMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWT-YNNLIYGYSST 306
Query: 277 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 336
A E + +T + L+ G + ++ ++ M Q +
Sbjct: 307 GQWKEA-VRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFS 365
Query: 337 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
Y +L+ Y G L ++ ++ D + DI + L+ A+++ G+ +KA
Sbjct: 366 YKIMLNGYATKGCLVDMTDLFDLMLGDGIAP-DIYTFSVLIKAYANCGMLDKA 417
Score = 41.2 bits (95), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 54/293 (18%), Positives = 105/293 (35%), Gaps = 39/293 (13%)
Query: 148 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 207
+G + + TS TY L+ A E A F ++ ++ L + ++ N ++ + +
Sbjct: 106 QGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKR 165
Query: 208 V-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM------------- 253
E + +++ VPD+F+Y++ + S Q L M
Sbjct: 166 TDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVA 225
Query: 254 ----------------SCD-------SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 290
+CD G D V Y ++V+ A + AE+
Sbjct: 226 YTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMV 285
Query: 291 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 350
K + W TY+ LI Y+ G + +++K +R ++ S G +
Sbjct: 286 NKGVLPDNW-TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKI 344
Query: 351 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
KE ++ D + D+ + +L ++ G + L+L AP
Sbjct: 345 KEARDVFDTMAMKGQNP-DVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAP 396
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 47/274 (17%), Positives = 118/274 (43%), Gaps = 19/274 (6%)
Query: 88 VSELRHILKELRKSQRYKHALEISEWMVTHKE------FVLSDSDYATRIDL--MTKVFG 139
V L ++ L K + K A ++ + M + + + + YAT+ L MT +F
Sbjct: 328 VVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFD 387
Query: 140 IHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMM 199
+ G+ A T++ L+ YA +KA +F ++ + + + Y ++
Sbjct: 388 LMLGDGI-------APDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVI 440
Query: 200 TLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG 259
+G+++ ++ + V PD + Y+ I ++ + K+ + E+ ++G
Sbjct: 441 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIM-NNGM 499
Query: 260 SDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQ-WITYDFLIILYAGLGNKDKI 318
D V + +++N +++A++ + + ++ Q + Y L+ Y +G +K
Sbjct: 500 RLDIVFFSSIINNLCKLGRIMDAQN--IFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKA 557
Query: 319 DQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 352
+++ ++ + Y +++ Y +G + E
Sbjct: 558 LRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDE 591
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 103/234 (44%), Gaps = 3/234 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY++++H A+ +KAE ++ + N YN ++ Y S GQ ++ V +E+
Sbjct: 256 TYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 315
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+R +++PD+ T ++ + S I + + D M+ G + + Y ++N Y T
Sbjct: 316 RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAM-KGQNPNVFSYTIMLNGYATKGC 374
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
LV+ + I + T++ LI YA G DK I+ +R K Y
Sbjct: 375 LVDMTDLFDLMLGDGIAPDIY-TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYR 433
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
++++ +G + + E +Q + D A + L+ F G KA E
Sbjct: 434 TVIAALCRIGKMDDAMEKFNQMIDQGVAP-DKYAYHCLIQGFCTHGSLLKAKEL 486
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 45/233 (19%), Positives = 98/233 (42%), Gaps = 5/233 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSN--LSFNALMYNEMMTLYMSVGQVEKVALVVE 216
+Y+ LL + +A++L + + S + + Y+ ++ + G V K + +
Sbjct: 184 SYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFK 243
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
E+ ++ + PD TY+ + + +D+ + FL +M ++W Y NL+ Y +
Sbjct: 244 EMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWT-YNNLIYGYSST 302
Query: 277 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 336
A E + +T L+ G + ++ ++ M Q +
Sbjct: 303 GQWKEA-VRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFS 361
Query: 337 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
Y +L+ Y G L ++ ++ D + DI N L+ A+++ G+ +KA
Sbjct: 362 YTIMLNGYATKGCLVDMTDLFDLMLGDGIAP-DIYTFNVLIKAYANCGMLDKA 413
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 54/293 (18%), Positives = 106/293 (36%), Gaps = 39/293 (13%)
Query: 148 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 207
+G + + TS TY L+ A E A F ++ ++ L N ++ N ++ + +
Sbjct: 102 QGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKR 161
Query: 208 V-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM------------- 253
E + +++ VPD+F+Y++ + S Q L M
Sbjct: 162 TDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVA 221
Query: 254 ----------------SCD-------SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 290
+CD G D+V Y ++V+ A + AE+
Sbjct: 222 YSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMV 281
Query: 291 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 350
K + W TY+ LI Y+ G + +++K +R ++ S G +
Sbjct: 282 NKGVLPNNW-TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKI 340
Query: 351 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
KE ++ D + ++ + +L ++ G + L+L AP
Sbjct: 341 KEARDVFDTMAMKGQNP-NVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAP 392
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 47/273 (17%), Positives = 116/273 (42%), Gaps = 17/273 (6%)
Query: 88 VSELRHILKELRKSQRYKHALEISEWMVTHKE------FVLSDSDYATRIDL--MTKVFG 139
V L ++ L K + K A ++ + M + + + + YAT+ L MT +F
Sbjct: 324 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFD 383
Query: 140 IHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMM 199
+ G+ G+ A T+ L+ YA +KA +F ++ + + + Y ++
Sbjct: 384 LMLGD----GI---APDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVI 436
Query: 200 TLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG 259
+G+++ ++ + V PD + Y+ I ++ + K+ + E+ ++G
Sbjct: 437 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIM-NNGM 495
Query: 260 SDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID 319
D V + +++N +++A++ + + + Y L+ Y +G +K
Sbjct: 496 HLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGL-HPTAVVYSMLMDGYCLVGKMEKAL 554
Query: 320 QIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 352
+++ ++ + Y +++ Y +G + E
Sbjct: 555 RVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDE 587
>gi|357123295|ref|XP_003563347.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Brachypodium distachyon]
Length = 800
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 117/254 (46%), Gaps = 14/254 (5%)
Query: 148 EGLPLSAKTS----ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM 203
E LPL + YT +LH + E+A ELF +K+ ++ +MYN M+ +Y
Sbjct: 174 EMLPLPPGSPGLDVRAYTTVLHALSHEGRYERALELFAELKREGVAPTHVMYNVMLDVYG 233
Query: 204 SVGQV-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 262
+G+ ++ ++EE++ V PD FT + I++C +D+ F +++ G
Sbjct: 234 RMGRSWPQIVAMLEEMRAAGVEPDGFTASTVIAACGRDGLVDEAVAFFEDLK-SRGHVPC 292
Query: 263 WVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 322
V Y L+ ++ A + + A L E E+S + +TY+ L YA G ++ +
Sbjct: 293 VVTYNALLQVFGKAGNYMEA-LRVLKEMEESGCKPDAVTYNELAGSYARAGFYEEAAKCL 351
Query: 323 KSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSD 382
++ + Y I+++Y G + E + D K++ + ++ N +LG
Sbjct: 352 DTMVSKGILPNAFTYNTIMTAYGNAGKVDEALALFDWMKKNGFIPY-VNTYNLILGMLG- 409
Query: 383 VGLTEKANEFHMLL 396
K + F+++L
Sbjct: 410 -----KKSRFNVML 418
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/229 (19%), Positives = 99/229 (43%), Gaps = 9/229 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY ALL ++ A +A + + +++S +A+ YNE+ Y G E+ A ++ +
Sbjct: 295 TYNALLQVFGKAGNYMEALRVLKEMEESGCKPDAVTYNELAGSYARAGFYEEAAKCLDTM 354
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI---YIT 275
K ++P+ FTYN +++ +D+ D M + ++ YVN N+ +
Sbjct: 355 VSKGILPNAFTYNTIMTAYGNAGKVDEALALFDWMK-----KNGFIPYVNTYNLILGMLG 409
Query: 276 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
N L E +S +T++ ++ + G + + ++ + ++ ++
Sbjct: 410 KKSRFNVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEGYVTRVLERMKSCGVELCRD 469
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 384
+ ++S+Y G ++ D+ + + ++ N LL S G
Sbjct: 470 TFNTLISAYGRCGSRANAFKMYDEMTAAGFTPC-LTTYNALLSVLSRQG 517
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
+ ++L +YA KA E+F+ +KQ LS + + YN MM +Y + + +++ +K
Sbjct: 611 FNSMLSMYAKNGMYRKAGEMFDSIKQGGLSPDLITYNSMMDMYAKSNESWEAEKILKRLK 670
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
+ PD+ +YN ++ I + ++ L EM D G V Y LV Y
Sbjct: 671 TSQLKPDVVSYNTVMNGFCKQGLIKEAQRILSEMIAD-GVRPCVVTYHTLVGGY 723
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 99/221 (44%), Gaps = 18/221 (8%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L YA A + E+A + + + + NA YN +MT Y + G+V++ + + +
Sbjct: 330 TYNELAGSYARAGFYEEAAKCLDTMVSKGILPNAFTYNTIMTAYGNAGKVDEALALFDWM 389
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K+ +P + TYNL + + + + L EMS SG + + V + + + +
Sbjct: 390 KKNGFIPYVNTYNLILGMLGKKSRFNVMLEMLGEMS-RSGCTPNRVTWNTM--LAVCGKR 446
Query: 279 LVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
+ + ++E KS + T++ LI Y G++ +++ +MT+ +
Sbjct: 447 GMEGYVTRVLERMKSCGVELCRDTFNTLISAYGRCGSRANAFKMY-------DEMTAAGF 499
Query: 338 ICILSSY-LMLGHLKEVGE------IIDQWKQSATSDFDIS 371
L++Y +L L G+ II++ K D+S
Sbjct: 500 TPCLTTYNALLSVLSRQGDWTAAQSIINKMKNEGFKPNDMS 540
Score = 41.2 bits (95), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 50/95 (52%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +++ +YA + + +AE++ +R+K S L + + YN +M + G +++ ++ E+
Sbjct: 645 TYNSMMDMYAKSNESWEAEKILKRLKTSQLKPDVVSYNTVMNGFCKQGLIKEAQRILSEM 704
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
V P + TY+ + A+ + ++ + M
Sbjct: 705 IADGVRPCVVTYHTLVGGYASREMFSEAREVVSYM 739
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 47/250 (18%), Positives = 105/250 (42%), Gaps = 13/250 (5%)
Query: 159 TYTALLHLYA-GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
TY ALL + + WT A+ + ++K N + Y+ ++ + G + + +E
Sbjct: 505 TYNALLSVLSRQGDWT-AAQSIINKMKNEGFKPNDMSYSLLLQCHAKGGNAAGIEAIEKE 563
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
+ V P + S ++ +++ E+ G D V + +++++Y
Sbjct: 564 VYEGTVFPSWVILRTLVISNFKCRRLEGIERAFQEVMA-RGHKPDLVIFNSMLSMYAK-- 620
Query: 278 HLVNAESSTLVEAEKSITQ----RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
N E SI Q ITY+ ++ +YA + ++I K L+ ++ K
Sbjct: 621 ---NGMYRKAGEMFDSIKQGGLSPDLITYNSMMDMYAKSNESWEAEKILKRLKTSQLKPD 677
Query: 334 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 393
+Y +++ + G +KE I+ + ++ + L+G ++ + +A E
Sbjct: 678 VVSYNTVMNGFCKQGLIKEAQRILSEMIADGVRPCVVTY-HTLVGGYASREMFSEAREVV 736
Query: 394 MLLLQKNCAP 403
++Q+N +P
Sbjct: 737 SYMIQRNLSP 746
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 84/186 (45%), Gaps = 2/186 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +L+ Y K KA+ +F + Q ++ N YN M+ + + +V++ + +E+
Sbjct: 303 TYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEM 362
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
KN++PD+ TYN I + I K +DEM D G D + Y ++++ + +H
Sbjct: 363 HCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMH-DRGVPHDKITYNSILDA-LCKNH 420
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
V+ + L + + Q TY LI G I++ L + +T Y
Sbjct: 421 QVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYT 480
Query: 339 CILSSY 344
++ +
Sbjct: 481 VMIQGF 486
Score = 41.2 bits (95), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 42/216 (19%), Positives = 89/216 (41%), Gaps = 6/216 (2%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDS-DYATR 130
A + + +SE V ++ K R K A + M+ K+ + D Y +
Sbjct: 250 AIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMM--KQGIKPDVVTYCSL 307
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKTS--ETYTALLHLYAGAKWTEKAEELFERVKQSNL 188
+D V ++ + F + T+ ++Y +++ + K ++A LF+ + N+
Sbjct: 308 MDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNI 367
Query: 189 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 248
+ + YN ++ G++ +V+E+ + V D TYN + + +D+
Sbjct: 368 IPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIA 427
Query: 249 FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES 284
L +M D G D Y L++ L +A++
Sbjct: 428 LLTKMK-DEGIQPDMYTYTILIDGLCKGGRLKDAQN 462
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 67/119 (56%), Gaps = 1/119 (0%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
T TYT+L+++ + ++A++LFE++ +S + +M+N M+ + + G VE+ ++
Sbjct: 381 PTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFML 440
Query: 215 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
++E+ RK+V PD T+N + +++ + LDEM G D + Y L++ Y
Sbjct: 441 LKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMK-XRGIKPDHISYNTLISGY 498
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
S TY +L+ E+A LF+++ + L NA+ YN ++ Y + G +E+ +
Sbjct: 243 SYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRD 302
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
E+ +K ++P + TYNL + + + + + EM G D + Y L+N Y
Sbjct: 303 EMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMR-KKGIIPDAITYNILINGY 358
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/234 (19%), Positives = 91/234 (38%), Gaps = 38/234 (16%)
Query: 174 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 233
+KA E ++ N + YN ++ Y S G +E +++ ++ K + PD +TY
Sbjct: 190 KKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSL 249
Query: 234 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 293
IS +++ D+M + G + V Y L++ Y L E++
Sbjct: 250 ISGMCKEGRLEEASGLFDKM-VEIGLVPNAVTYNTLIDGYCNKGDL-----------ERA 297
Query: 294 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 353
+ R D++ K M + Y ++ + M G + E
Sbjct: 298 FSYR---------------------DEMVKKGIMP----SVSTYNLLVHALFMEGRMGEA 332
Query: 354 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
++I + ++ D N L+ +S G ++A + H +L K PT+ +
Sbjct: 333 DDMIKEMRKKGIIP-DAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVT 385
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 45/244 (18%), Positives = 96/244 (39%), Gaps = 4/244 (1%)
Query: 146 YFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSV 205
+ EGL +Y ++H Y+ E A + + ++ + ++ Y +++
Sbjct: 198 FMEGLGFKPNVV-SYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKE 256
Query: 206 GQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVK 265
G++E+ + + +++ +VP+ TYN I ++++ + DEM G
Sbjct: 257 GRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEM-VKKGIMPSVST 315
Query: 266 YVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 325
Y LV+ + A+ + E K ITY+ LI Y+ GN + + +
Sbjct: 316 YNLLVHALFMEGRMGEAD-DMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEM 374
Query: 326 RMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGL 385
+ T Y ++ +KE ++ ++ S D+ N ++ G
Sbjct: 375 LSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSP-DVIMFNAMIDGHCANGN 433
Query: 386 TEKA 389
E+A
Sbjct: 434 VERA 437
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 76/138 (55%), Gaps = 5/138 (3%)
Query: 136 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 195
K F +H+ E +G+ T TYT+L+++ + ++A++LFE++ +S + +M+
Sbjct: 442 KAFDLHN-EMLSKGI---EPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMF 497
Query: 196 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 255
N M+ + + G VE+ ++++E+ RK+V PD T+N + +++ + LDEM
Sbjct: 498 NAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMK- 556
Query: 256 DSGGSDDWVKYVNLVNIY 273
G D + Y L++ Y
Sbjct: 557 RRGIKPDHISYNTLISGY 574
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
S TY +L+ E+A LF+++ + L NA+ YN ++ Y + G +E+ +
Sbjct: 319 SYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRD 378
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
E+ +K ++P + TYNL + + + + + EM G D + Y L+N Y
Sbjct: 379 EMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMR-KKGIIPDAITYNILINGY 434
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 49/254 (19%), Positives = 99/254 (38%), Gaps = 38/254 (14%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
+ T T+ ++++ +KA E ++ N + YN ++ Y S G +E
Sbjct: 246 SSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARR 305
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
+++ ++ K + PD +TY IS +++ D+M + G + V Y L++ Y
Sbjct: 306 ILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKM-VEIGLVPNAVTYNTLIDGY 364
Query: 274 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
L E++ + R D++ K M +
Sbjct: 365 CNKGDL-----------ERAFSYR---------------------DEMVKKGIMP----S 388
Query: 334 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 393
Y ++ + M G + E ++I + ++ D N L+ +S G +KA + H
Sbjct: 389 VSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIP-DAITYNILINGYSRCGNAKKAFDLH 447
Query: 394 MLLLQKNCAPTNAS 407
+L K PT+ +
Sbjct: 448 NEMLSKGIEPTHVT 461
>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 3/186 (1%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-EKVALVVEEI 218
YT+L+ YA +A +F+++++ + YN ++ +Y +G K+A +V+ +
Sbjct: 223 YTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSM 282
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K V PD++TYN ISSC ++ + +EM +G S D V Y L+++Y S
Sbjct: 283 KSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKA-AGFSPDKVTYNALLDVY-GKSR 340
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L E E S +TY+ LI YA G D+ ++ + K Y
Sbjct: 341 RPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYT 400
Query: 339 CILSSY 344
+LS +
Sbjct: 401 TLLSGF 406
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 109/249 (43%), Gaps = 11/249 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY ALL +Y ++ +A E+ + ++ S + + + YN +++ Y G +++ + ++
Sbjct: 328 TYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQM 387
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+K + PD+FTY +S T D K +EM +G + + L+ ++ +
Sbjct: 388 VKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRV-AGCQPNICTFNALIKMHGNRGN 446
Query: 279 LVNA----ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 334
V E + E I +T++ L+ ++ G ++ ++K ++
Sbjct: 447 FVEMMKVFEEIKICECVPDI-----VTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPER 501
Query: 335 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 394
+ ++S+Y G + I + + + D+S N +L A + GL E++ +
Sbjct: 502 DTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTP-DLSTYNAVLAALARGGLWEQSEKVLA 560
Query: 395 LLLQKNCAP 403
+ C P
Sbjct: 561 EMKDGRCKP 569
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 69/168 (41%), Gaps = 2/168 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T A++ +Y + K E+ +K S + + YN +M +Y EK ++ EI
Sbjct: 643 TLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREI 702
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K + PDI ++N I + + + + EM D G + D + Y + Y + S
Sbjct: 703 IAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMK-DFGLAPDVITYNTFIASYASDSM 761
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 326
+ A + Q TY+ LI + L +D+ +LR
Sbjct: 762 FIEAIDVVKYMIKNGCKPNQN-TYNSLIDWFCKLNRRDEASSFISNLR 808
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 105/245 (42%), Gaps = 3/245 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+ E+A E+FE +K + S + + YN ++ +Y + + V++E+
Sbjct: 293 TYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEM 352
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ P I TYN IS+ A +D+ + +M G D Y L++ + +
Sbjct: 353 EASGFAPSIVTYNSLISAYARDGLLDEAMELKSQM-VKKGIKPDVFTYTTLLSGF-EKTG 410
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ E + Q T++ LI ++ GN ++ ++++ +++ + +
Sbjct: 411 KDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWN 470
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
+L+ + G EV + + K++ + N L+ A+S G ++A + +L
Sbjct: 471 TLLAVFGQNGMDSEVSGVFKEMKRAGFVP-ERDTFNTLISAYSRCGFFDQAMAIYRRMLD 529
Query: 399 KNCAP 403
P
Sbjct: 530 AGVTP 534
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 71/168 (42%), Gaps = 2/168 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +LLH YA K E+ L E + + A++ ++ +Y + + E+
Sbjct: 573 TYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLEL 632
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + PDI T N +S + + + L+ + DSG + Y +L+ +Y H
Sbjct: 633 REQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIK-DSGFTPSLTTYNSLMYMYSRTEH 691
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 326
+E L E + I+++ +I Y G + +I+ ++
Sbjct: 692 FEKSE-DILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMK 738
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 49/246 (19%), Positives = 105/246 (42%), Gaps = 5/246 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY A+L A E++E++ +K N L Y ++ Y + +VE+++ + EEI
Sbjct: 538 TYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEI 597
Query: 219 KRKNVVPD-IFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
+ P + L + + L + + FL+ + G S D +V+IY
Sbjct: 598 YSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELR--EQGFSPDITTLNAMVSIY-GRR 654
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
+V+ + L + S TY+ L+ +Y+ + +K + I + + K ++
Sbjct: 655 RMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISF 714
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 397
++ +Y G +KE I + K + D+ N + +++ + +A + ++
Sbjct: 715 NTVIFAYCRNGRMKEASRIFAEMKDFGLAP-DVITYNTFIASYASDSMFIEAIDVVKYMI 773
Query: 398 QKNCAP 403
+ C P
Sbjct: 774 KNGCKP 779
>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 3/186 (1%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-EKVALVVEEI 218
YT+L+ YA +A +F+++++ + YN ++ +Y +G K+A +V+ +
Sbjct: 223 YTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSM 282
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K V PD++TYN ISSC ++ + +EM +G S D V Y L+++Y S
Sbjct: 283 KSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKA-AGFSPDKVTYNALLDVY-GKSR 340
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L E E S +TY+ LI YA G D+ ++ + K Y
Sbjct: 341 RPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYT 400
Query: 339 CILSSY 344
+LS +
Sbjct: 401 TLLSGF 406
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 109/249 (43%), Gaps = 11/249 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY ALL +Y ++ +A E+ + ++ S + + + YN +++ Y G +++ + ++
Sbjct: 328 TYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQM 387
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+K + PD+FTY +S T D K +EM +G + + L+ ++ +
Sbjct: 388 VKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRV-AGCQPNICTFNALIKMHGNRGN 446
Query: 279 LVNA----ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 334
V E + E I +T++ L+ ++ G ++ ++K ++
Sbjct: 447 FVEMMKVFEEIKICECVPDI-----VTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPER 501
Query: 335 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 394
+ ++S+Y G + I + + + D+S N +L A + GL E++ +
Sbjct: 502 DTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTP-DLSTYNAVLAALARGGLWEQSEKVLA 560
Query: 395 LLLQKNCAP 403
+ C P
Sbjct: 561 EMKDGRCKP 569
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 6/170 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T A++ +Y + K E+ +K S + + YN +M +Y EK ++ EI
Sbjct: 643 TLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREI 702
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K + PDI ++N I + + + + EM D G + D + Y + Y + S
Sbjct: 703 IAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMK-DFGLAPDVITYNTFIASYASDSM 761
Query: 279 LVNAESST--LVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 326
+ A +++ E Q TY+ LI + L +D+ + +LR
Sbjct: 762 FIEAIDVVKYMIKNECKPNQN---TYNSLIDWFCKLNRRDEANSFISNLR 808
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 105/245 (42%), Gaps = 3/245 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+ E+A E+FE +K + S + + YN ++ +Y + + V++E+
Sbjct: 293 TYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEM 352
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ P I TYN IS+ A +D+ + +M G D Y L++ + +
Sbjct: 353 EASGFAPSIVTYNSLISAYARDGLLDEAMELKSQM-VKKGIKPDVFTYTTLLSGF-EKTG 410
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ E + Q T++ LI ++ GN ++ ++++ +++ + +
Sbjct: 411 KDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWN 470
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
+L+ + G EV + + K++ + N L+ A+S G ++A + +L
Sbjct: 471 TLLAVFGQNGMDSEVSGVFKEMKRAGFVP-ERDTFNTLISAYSRCGFFDQAMAIYRRMLD 529
Query: 399 KNCAP 403
P
Sbjct: 530 AGVTP 534
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 75/150 (50%), Gaps = 13/150 (8%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +L+++Y+ + EK+E++ + + + + +N ++ Y G++++ + + E+
Sbjct: 678 TYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEM 737
Query: 219 KRKNVVPDIFTYNLWISSCAAT---LNIDQVKKFLDEMSCDSGGSD-----DWVKYVNL- 269
K + PD+ TYN +I+S A+ + V K++ + C + DW +N
Sbjct: 738 KDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLIDWFCKLNRR 797
Query: 270 --VNIYITASHLVNAESSTLVEAEKSITQR 297
N +I S+L N + S + E+ + +R
Sbjct: 798 DEANSFI--SNLRNLDPSVTKDEERRLLER 825
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 71/168 (42%), Gaps = 2/168 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +LLH YA K E+ L E + + A++ ++ +Y + + E+
Sbjct: 573 TYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLEL 632
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + PDI T N +S + + + L+ + DSG + Y +L+ +Y H
Sbjct: 633 REQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIK-DSGFTPSLTTYNSLMYMYSRTEH 691
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 326
+E L E + I+++ +I Y G + +I+ ++
Sbjct: 692 FEKSE-DILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMK 738
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 49/246 (19%), Positives = 105/246 (42%), Gaps = 5/246 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY A+L A E++E++ +K N L Y ++ Y + +VE+++ + EEI
Sbjct: 538 TYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEI 597
Query: 219 KRKNVVPD-IFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
+ P + L + + L + + FL+ + G S D +V+IY
Sbjct: 598 YSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELR--EQGFSPDITTLNAMVSIY-GRR 654
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
+V+ + L + S TY+ L+ +Y+ + +K + I + + K ++
Sbjct: 655 RMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISF 714
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 397
++ +Y G +KE I + K + D+ N + +++ + +A + ++
Sbjct: 715 NTVIFAYCRNGRMKEASRIFAEMKDFGLAP-DVITYNTFIASYASDSMFIEAIDVVKYMI 773
Query: 398 QKNCAP 403
+ C P
Sbjct: 774 KNECKP 779
>gi|302797114|ref|XP_002980318.1| hypothetical protein SELMODRAFT_112505 [Selaginella moellendorffii]
gi|300151934|gb|EFJ18578.1| hypothetical protein SELMODRAFT_112505 [Selaginella moellendorffii]
Length = 344
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 103/232 (44%), Gaps = 8/232 (3%)
Query: 149 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 208
G+P S S TY L+H+YA A+ ++ A EL+ +S L N ++YN ++ Y S G
Sbjct: 118 GIPFS---SATYAILIHMYAKARDSKAAAELYADYLRSGLEPNLIVYNNVILSYGSSGFP 174
Query: 209 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268
++ +I++ + PD FTY ISS A + Q +++ ++ +C +
Sbjct: 175 GHAQNILGDIRKAGLAPDRFTYCTLISSWARAGAMLQARRWFNK-ACKTKAGPSIEMCNA 233
Query: 269 LVNIYITASHLVNAE---SSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 325
L++ Y+ A + A+ + + +S + I Y+ +I+ Y G I +
Sbjct: 234 LIDGYLKAREVEPAKFILTKLYADYLRSGLEPNLIVYNNVILSYGSSGFSGHAQNILGDI 293
Query: 326 RMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLL 377
R Y ++SS+ G + + ++ ++ I CN L+
Sbjct: 294 RKAGLAPDRFTYCTLISSWARAGAMLQARRWFNKACKTKAGP-SIEMCNALI 344
>gi|297737369|emb|CBI26570.3| unnamed protein product [Vitis vinifera]
Length = 1042
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 144/327 (44%), Gaps = 15/327 (4%)
Query: 85 QATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFG-IHSG 143
Q T ++ ++K + +S ++ ALE+ EW+ + + AT + ++ K +
Sbjct: 125 QMTPTDFCFVVKWVGQSS-WQRALEVYEWLNLRHWYSPNARMLATILSVLGKANQEALAV 183
Query: 144 ERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM 203
E + S T + Y A++ +YA K +EL + ++ + + +N ++ +
Sbjct: 184 EIFARAEAASGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARL 243
Query: 204 SVG-QVEKVAL-VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD 261
G V +A+ ++ E++R + PDI TYN IS+C+ N+++ K ++M D
Sbjct: 244 KSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPD 303
Query: 262 DWVKYVNLVNIYITASHLVNAESSTLV-EAEKSITQRQWITYDFLIILYAGLGNKDKIDQ 320
W Y ++++Y ++ E+ L + E +TY+ L+ +A GN DK+ +
Sbjct: 304 LWT-YNAMISVYGRCG--MSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKE 360
Query: 321 IWKS---LRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLL 377
I + + K +MT Y I+ Y G ++ K S S D L+
Sbjct: 361 ICEDMVKMGFGKDEMT---YNTIIHMYGKRGQHDLAFQLYSDMKLSGRSP-DAVTYTVLI 416
Query: 378 GAFSDVGLTEKANEFHMLLLQKNCAPT 404
+ + ++A E +L PT
Sbjct: 417 DSLGKANMIKEAAEVMSEMLNARVKPT 443
>gi|297737325|emb|CBI26526.3| unnamed protein product [Vitis vinifera]
Length = 1005
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 110/251 (43%), Gaps = 11/251 (4%)
Query: 161 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 220
+ ++H A ++AE + R + L + + YN + + G++ + + +
Sbjct: 682 SKVVHALANYGKHQEAENVIRRSFEDGLELDTVAYNTFINAMLGAGRLHFANSIYDRMVS 741
Query: 221 KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS-GGSDDWVKYVNLVNIYITASHL 279
V P I TYN IS +D+ + ++ C G S D Y NL++ Y A
Sbjct: 742 LGVAPSIQTYNTMISVYGRGRKLDKAVEMFNKARCSGVGVSLDEKTYTNLISYYGKAGK- 800
Query: 280 VNAESSTLV-EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ E+S L E ++ + ++Y+ +I +YA G + ++++++ S Y+
Sbjct: 801 -SHEASLLFREMQEEGIKPGKVSYNIMINVYATAGLHHEAQELFQAMLRDGCSPDSLTYL 859
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC---NRLLGAFSDVGLTEKANEFHML 395
++ +Y E E I S ++ + +C N+LL AF+ G TE+A +
Sbjct: 860 ALIRAYTQSFKFLEAEETI----MSMQNEGVLPSCVHFNQLLSAFAKAGFTEEAERVYHT 915
Query: 396 LLQKNCAPTNA 406
LL +P A
Sbjct: 916 LLSAGLSPDVA 926
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
+ LL +A A +TE+AE ++ + + LS + Y M+ Y+ G VEK E+I
Sbjct: 893 FNQLLSAFAKAGFTEEAERVYHTLLSAGLSPDVACYRTMLRGYLDYGCVEKGITFFEQI- 951
Query: 220 RKNVVPDIF 228
R++V PD F
Sbjct: 952 RESVEPDRF 960
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 35/181 (19%), Positives = 73/181 (40%), Gaps = 25/181 (13%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
YT LL +Y + AE+ F + ++ + + M+ Y G+ + + +
Sbjct: 194 VYTILLRVYGQVGKIKLAEQAFLEMLEAGCEPDEVACGTMLCTYARWGRHKAMLSFYSAV 253
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + ++P I +N +SS KK L + +++ +
Sbjct: 254 QERGIIPSIAVFNFMLSSLQ--------KKSL---------------HGKVIDFSLVKDG 290
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
LV T E + + +TY LI L + GN+D+ ++++ +R +++ NY
Sbjct: 291 LVEESFKTFYEMKNLGFVPEEVTYSLLISLSSKTGNRDEAIKLYEDMRY--RRIVPSNYT 348
Query: 339 C 339
C
Sbjct: 349 C 349
Score = 38.1 bits (87), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 83/222 (37%), Gaps = 39/222 (17%)
Query: 206 GQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVK 265
G VE+ E+K VP+ TY+L IS + T N D+ K ++M ++
Sbjct: 290 GLVEESFKTFYEMKNLGFVPEEVTYSLLISLSSKTGNRDEAIKLYEDMRYRRIVPSNYT- 348
Query: 266 YVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 325
+L+ +Y A S E EK+ + Y LI +Y LG + ++ +K
Sbjct: 349 CASLLTLYYKNGDYSRA-VSLFSEMEKNKIVADEVIYGLLIRIYGKLGLYEDAEKTFKET 407
Query: 326 R----MTKQK------------------------MTSRN-------YICILSSYLMLGHL 350
+T +K M SRN YI +L Y+M L
Sbjct: 408 EQLGLLTNEKTYIAMAQVHLNSGNFEKALTIMELMRSRNIWFSRFSYIVLLQCYVMKEDL 467
Query: 351 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
S T D +CN +L + + L EKA +F
Sbjct: 468 ASAEATFQAL--SKTGLPDAGSCNDMLNLYIKLDLLEKAKDF 507
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 70/342 (20%), Positives = 144/342 (42%), Gaps = 17/342 (4%)
Query: 70 RSATNVIQRWVSEGNQATVSELRHILKELRK-SQRYKHALEISEWMVTHKEFVLSDS-DY 127
R A V +R V G Q + +L K + +K +E+ M H V D Y
Sbjct: 189 RDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHG--VAPDRYTY 246
Query: 128 ATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQ 185
T I + + F+ + S + T+ +LL +Y A+ ++A E+ + +++
Sbjct: 247 NTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMER 306
Query: 186 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 245
+ + YN +++ Y+ G +E+ + +E++ K + PD+ TY IS ID
Sbjct: 307 VGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDA 366
Query: 246 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW----IT 301
DEM +G + Y L+ + H V + ++ + + +T
Sbjct: 367 AIVEYDEM-VRNGCKPNLCTYNALIKM-----HGVRGKFPEMMAVFDELRSAGFVPDIVT 420
Query: 302 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 361
++ L+ ++ G ++ ++K ++ Y+ ++SSY G +I +
Sbjct: 421 WNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMM 480
Query: 362 QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
++ D+S N +L A + G E+A + + +++C P
Sbjct: 481 EAGIYP-DVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKP 521
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 162 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 221
A++ +Y + K E++ +K+S ++ +A YN +M +Y +G EK ++ EIK
Sbjct: 598 AMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSS 657
Query: 222 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
V PD ++YN I + + + + EM C SG D V Y V Y++ S
Sbjct: 658 GVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKC-SGLKPDVVTYNIFVKSYVSNS 712
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 85/200 (42%), Gaps = 8/200 (4%)
Query: 117 HKEFVLSDSDY-ATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEK 175
H E VL AT I +M + + + P + YTAL+ ++ A
Sbjct: 133 HGEGVLHHPRVLATAIRVMARAGRLAEASALLDAAP--GPDAGAYTALVSAFSRAGRFRD 190
Query: 176 AEELFERVKQSNLSFNALMYNEMMTLY--MSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 233
A +F R+ S + + YN ++ +Y M+V E V LV +K V PD +TYN
Sbjct: 191 AVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVA-SMKEHGVAPDRYTYNTL 249
Query: 234 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 293
IS C + + DEM SG D V + +L+++Y A A + E E+
Sbjct: 250 ISCCRRRALYKEAAQVFDEMKA-SGFEPDKVTFNSLLDVYGKARRHDEA-IEVIQEMERV 307
Query: 294 ITQRQWITYDFLIILYAGLG 313
+TY+ LI Y G
Sbjct: 308 GCPPSVVTYNSLISSYVKDG 327
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/281 (19%), Positives = 124/281 (44%), Gaps = 38/281 (13%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
+TY +L+ Y+ + A ++++R+ ++ + + YN +++ G+ E+ + E
Sbjct: 454 DTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAE 513
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW-VKYVNLVNIYITA 276
++ ++ PD ++Y+ + + A +D++K D++ + +W VK + LVN +
Sbjct: 514 MEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKV-- 571
Query: 277 SHLVNAESSTL-----------------------------VEAEKSITQRQWI-----TY 302
++L AE + L VE S+ + I TY
Sbjct: 572 NNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATY 631
Query: 303 DFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ 362
+ L+ +Y+ LG+ +K + I ++ + + +Y ++ +Y G +KE + + K
Sbjct: 632 NSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKC 691
Query: 363 SATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
S D+ N + ++ + E+A E ++ + C P
Sbjct: 692 SGLKP-DVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKP 731
>gi|224136033|ref|XP_002327364.1| predicted protein [Populus trichocarpa]
gi|222835734|gb|EEE74169.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 122/281 (43%), Gaps = 20/281 (7%)
Query: 87 TVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERY 146
T S + H+L RK + +E+S K++ +S S YA + + K+ R
Sbjct: 353 TYSVILHLLATERKLHKLDEVVEVS------KKY-MSRSIYAYLVRTLKKLGHASEAHRL 405
Query: 147 FEGL--PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMS 204
F + + ++L A T +A +L ++ + +S + +MYN + +
Sbjct: 406 FCNMWNCHERGDRDACVSMLECLCSAGKTTEAIDLLGKIHEKGVSVDTVMYNTVFSALGK 465
Query: 205 VGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWV 264
+ Q+ + + E++K+ +PD FTYN+ ISS +D+ K +E+ DS D
Sbjct: 466 LKQISPLHDLYEKMKQDGPLPDTFTYNILISSFGRAGKVDEAIKIFEELE-DSDYKPDTC 524
Query: 265 KYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS 324
Y +L+N HL A EK + +TY LI + K D++ +
Sbjct: 525 SYNSLINCLGKNGHLDEAHMKFKEMCEKGLNP-DVVTYSTLIECFG------KTDKVEMA 577
Query: 325 LRMTKQKMTSRNYICILSSYLMLGHLKEVG---EIIDQWKQ 362
R+ + + Y I++ ++L L+ G E +D + +
Sbjct: 578 CRLFDEMLAEGCYPNIVTYNILLDCLERSGRTAEAVDLYAK 618
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 101/235 (42%), Gaps = 8/235 (3%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
T TY L+ Y ++ TEK ++ +K+ + +N ++ + +V+ V
Sbjct: 210 TGYTYKCLVQAYLRSRNTEKGFAVYLEMKKKGHMLDIFAFNMLLDALVKDSEVDHAYKVF 269
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275
E++KRK+ PD +TY + I D+ + +EM + G S + + Y ++
Sbjct: 270 EDMKRKHCEPDEYTYTIMIRMTGKIGKPDESLELFEEM-LNKGYSPNVIAYNTMIQALAN 328
Query: 276 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
A + A L EK ++ TY ++ L A K+D++ + ++K+ M+
Sbjct: 329 ARMVDKAILLFLKMVEKECRPSEF-TYSVILHLLATERKLHKLDEV---VEVSKKYMSRS 384
Query: 336 NYICILSSYLMLGHLKEVGEII-DQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
Y ++ + LGH E + + W D D AC +L G T +A
Sbjct: 385 IYAYLVRTLKKLGHASEAHRLFCNMWNCHERGDRD--ACVSMLECLCSAGKTTEA 437
>gi|297844992|ref|XP_002890377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336219|gb|EFH66636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 537
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 113/265 (42%), Gaps = 10/265 (3%)
Query: 140 IHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE--KAEELFERVKQSNLSFNALMYNE 197
I E+ F+ + L+ YT + + A + + +A ++F + S + NA+ +N
Sbjct: 271 ISEAEKVFKDMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNN 330
Query: 198 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM---S 254
+M +++ G+ EKV V ++K+ PD TYN I + N++ K L+ M
Sbjct: 331 LMRVHVKAGRPEKVLQVYNQMKKLGCEPDTITYNFLIETHCRDENLENAVKVLNTMIKKK 390
Query: 255 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 314
C+ S N + YI VN + ++ + +TY+ L+ ++AG +
Sbjct: 391 CEVNAST-----FNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFAGSKS 445
Query: 315 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 374
D + ++ K + + + Y +++ + +GH ++ + + +S
Sbjct: 446 TDMVLKMKKDMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYE 505
Query: 375 RLLGAFSDVGLTEKANEFHMLLLQK 399
+L G +K E ++QK
Sbjct: 506 MVLAQLRRAGQLKKHEELVEKMIQK 530
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/134 (20%), Positives = 65/134 (48%), Gaps = 7/134 (5%)
Query: 175 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 234
+A+ F+ +K + ++Y ++ + G++ + V +++K + P+++TY++ I
Sbjct: 239 EAQSFFDSLKD-RFEPDVIVYTNLVRGWCRAGEISEAEKVFKDMKLAGIEPNVYTYSIVI 297
Query: 235 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV--EAEK 292
+ I + +M DSG + + + + NL+ +++ A E V + +K
Sbjct: 298 DALCRCGQISRAHDVFADM-LDSGCAPNAITFNNLMRVHVKAGR---PEKVLQVYNQMKK 353
Query: 293 SITQRQWITYDFLI 306
+ ITY+FLI
Sbjct: 354 LGCEPDTITYNFLI 367
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 76/138 (55%), Gaps = 5/138 (3%)
Query: 136 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 195
K F +H+ E +G+ T TYT+L+++ + ++A++LFE++ +S + +M+
Sbjct: 420 KAFDLHN-EMLSKGI---EPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMF 475
Query: 196 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 255
N M+ + + G VE+ ++++E+ RK+V PD T+N + +++ + LDEM
Sbjct: 476 NAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMK- 534
Query: 256 DSGGSDDWVKYVNLVNIY 273
G D + Y L++ Y
Sbjct: 535 RRGIKPDHISYNTLISGY 552
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
S TY +L+ E+A LF+++ + L NA+ YN ++ Y + G +E+ +
Sbjct: 297 SYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRD 356
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
E+ +K ++P + TYNL + + + + + EM G D + Y L+N Y
Sbjct: 357 EMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMR-KKGIIPDAITYNILINGY 412
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 49/254 (19%), Positives = 99/254 (38%), Gaps = 38/254 (14%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
+ T T+ ++++ +KA E ++ N + YN ++ Y S G +E
Sbjct: 224 SSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARR 283
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
+++ ++ K + PD +TY IS +++ D+M + G + V Y L++ Y
Sbjct: 284 ILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKM-VEIGLVPNAVTYNTLIDGY 342
Query: 274 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
L E++ + R D++ K M +
Sbjct: 343 CNKGDL-----------ERAFSYR---------------------DEMVKKGIMP----S 366
Query: 334 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 393
Y ++ + M G + E ++I + ++ D N L+ +S G +KA + H
Sbjct: 367 VSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIP-DAITYNILINGYSRCGNAKKAFDLH 425
Query: 394 MLLLQKNCAPTNAS 407
+L K PT+ +
Sbjct: 426 NEMLSKGIEPTHVT 439
>gi|168019209|ref|XP_001762137.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686541|gb|EDQ72929.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 513
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/381 (19%), Positives = 155/381 (40%), Gaps = 63/381 (16%)
Query: 67 LPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSD 126
LP ++ NV+ S G Q +E +L E+++S S +VT
Sbjct: 133 LPTETSFNVLMAAYSRGGQLERAE--RVLHEMKESN-------CSPGLVT---------- 173
Query: 127 YATRIDLMTKVFGIHSGERYFE-----GLPLSAKTSETYTALLHLYAGAKWTEKAEELFE 181
Y T ++++ K E F G+P + T +T ++++Y A + KAE LF+
Sbjct: 174 YNTYLEVLNKSGSWQLAEDVFREMQNRGVPPAVNT---FTLMINIYGKAHHSAKAEHLFQ 230
Query: 182 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL 241
++++ + Y ++ + G + + E++ VPDI+TYN + + +
Sbjct: 231 SMRKALCPPSLFTYTALINAHAREGNCVRAEEIFAELQSVGFVPDIYTYNALLEAYSRGG 290
Query: 242 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES----------------- 284
+ K+ + M ++G D V Y L++ + A + +A++
Sbjct: 291 HPAGAKEVFETM-LEAGVKADHVSYNILIDAFGRAGLISDAQAIYDSMKKVGFKPTMKSH 349
Query: 285 ----STLVEAEKSITQRQWI-------------TYDFLIILYAGLGNKDKIDQIWKSLRM 327
S V+A + ++ ++ L+ Y G DK++ +++S++
Sbjct: 350 ILLLSAFVKAGRVTDAENFVRRLESMGVEPDTFMFNSLLGAYGNSGRMDKMESLYESMQG 409
Query: 328 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 387
+ K +++ Y G+++ EI + + + D+ + L+GA+S L
Sbjct: 410 SVCKPDIITLNTLINVYAQGGYIERAEEIFNSLESKGFTP-DVMSWTSLMGAYSKRKLYR 468
Query: 388 KANEFHMLLLQKNCAPTNASG 408
K + +L C P A+
Sbjct: 469 KCVSVYQKMLIAGCIPDRATA 489
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 100/249 (40%), Gaps = 5/249 (2%)
Query: 160 YTALLHLYAGAK-WTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+ L+ Y K WTE AE F +K+ +N +M Y GQ+E+ V+ E+
Sbjct: 104 FNMLMDAYGRTKQWTE-AENTFHLMKKFQCLPTETSFNVLMAAYSRGGQLERAERVLHEM 162
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K N P + TYN ++ + + + EM + G + ++NIY A H
Sbjct: 163 KESNCSPGLVTYNTYLEVLNKSGSWQLAEDVFREMQ-NRGVPPAVNTFTLMINIYGKAHH 221
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
AE K++ TY LI +A GN + ++I+ L+ Y
Sbjct: 222 SAKAE-HLFQSMRKALCPPSLFTYTALINAHAREGNCVRAEEIFAELQSVGFVPDIYTYN 280
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
+L +Y GH E+ + ++ +S N L+ AF GL A + + +
Sbjct: 281 ALLEAYSRGGHPAGAKEVFETMLEAGVKADHVSY-NILIDAFGRAGLISDAQAIYDSMKK 339
Query: 399 KNCAPTNAS 407
PT S
Sbjct: 340 VGFKPTMKS 348
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T L+++YA + E+AEE+F ++ + + + + +M Y K V +++
Sbjct: 418 TLNTLINVYAQGGYIERAEEIFNSLESKGFTPDVMSWTSLMGAYSKRKLYRKCVSVYQKM 477
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 251
+PD T + +SSC +QVK+ D
Sbjct: 478 LIAGCIPDRATAKVLLSSCRGP---EQVKEVTD 507
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 101/235 (42%), Gaps = 5/235 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY++++H A+ +KAE ++ + + YN ++ Y S GQ ++ V +E+
Sbjct: 258 TYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEM 317
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+R++++PD+ N + S I + + D M+ G + D Y ++N Y T
Sbjct: 318 RRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAM-KGQNPDVFSYTIMLNGYATKGC 376
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
LV+ + I T++ LI YA G DK I+ +R K Y+
Sbjct: 377 LVDMTDLFDLMLGDGIAP-VICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYM 435
Query: 339 CILSSYLMLGHLKEVGEIIDQW-KQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
++++ +G + + E +Q Q D C L+ F G KA E
Sbjct: 436 TVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHC--LIQGFCTHGSLLKAKEL 488
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 104/238 (43%), Gaps = 15/238 (6%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSN--LSFNALMYNEMMTLYMSVGQVEKVALVVE 216
+Y LL + +A++L + + S + + YN ++ + G V K + +
Sbjct: 186 SYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFK 245
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
E+ ++ + PD+ TY+ + + +D+ + FL +M D+W Y NL+ Y +
Sbjct: 246 EMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWT-YNNLIYGYSST 304
Query: 277 SHLVNAESSTLVEAEKSITQRQWITYDFLII--LYAGLGNKDKIDQ---IWKSLRMTKQK 331
A V K + +RQ I D + + L L KI + ++ ++ M Q
Sbjct: 305 GQWKEA-----VRVFKEM-RRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQN 358
Query: 332 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
+Y +L+ Y G L ++ ++ D + I N L+ A+++ G+ +KA
Sbjct: 359 PDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPV-ICTFNVLIKAYANCGMLDKA 415
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 50/291 (17%), Positives = 123/291 (42%), Gaps = 17/291 (5%)
Query: 70 RSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKE------FVLS 123
+ A V + + V L ++ L K + K A ++ + M + + +
Sbjct: 308 KEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIM 367
Query: 124 DSDYATRIDL--MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFE 181
+ YAT+ L MT +F + G+ G+ A T+ L+ YA +KA +F
Sbjct: 368 LNGYATKGCLVDMTDLFDLMLGD----GI---APVICTFNVLIKAYANCGMLDKAMIIFN 420
Query: 182 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL 241
++ + + + Y ++ +G+++ ++ + VVPD + Y+ I
Sbjct: 421 EMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHG 480
Query: 242 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWIT 301
++ + K+ + E+ ++G D V + +++N +++A++ + + +
Sbjct: 481 SLLKAKELISEIM-NNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGL-HPDAVV 538
Query: 302 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 352
Y+ L+ Y +G +K +++ ++ + Y +++ Y +G + E
Sbjct: 539 YNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDE 589
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 101/250 (40%), Gaps = 12/250 (4%)
Query: 148 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 207
+G + + TS TY L+ A E A F ++ ++ L +A++ + ++ + +
Sbjct: 104 QGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKR 163
Query: 208 V-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG---SDDW 263
E + +++ VPD+F+YN+ + S Q L M+ GG S D
Sbjct: 164 TDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMA--EGGTVCSPDV 221
Query: 264 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 323
V Y +++ + VN E + +TY ++ DK + +
Sbjct: 222 VAYNTVIDGFFKEGD-VNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLR 280
Query: 324 SLRMTKQKMTSRN--YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFS 381
+M + + N Y ++ Y G KE + + ++ + D+ A N L+G+
Sbjct: 281 --QMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILP-DVVALNTLMGSLC 337
Query: 382 DVGLTEKANE 391
G ++A +
Sbjct: 338 KYGKIKEARD 347
>gi|297790207|ref|XP_002863007.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297308804|gb|EFH39266.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 842
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 133/300 (44%), Gaps = 44/300 (14%)
Query: 132 DLMTKVFGI-HSGER---YFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQ 185
++M K +GI S E+ FE + T + TY L+ + A A +KA+ E++++
Sbjct: 509 NVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPDKAKCYLEKMRE 568
Query: 186 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 245
+ + + Y +++ ++ +GQ+ V +E+ N+ PD+ Y + I++ A T N+ Q
Sbjct: 569 TGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQ 628
Query: 246 VKKFLDEMSCDSGGSDDWVKYVNLVNIY---------------------------ITASH 278
+++ M ++G + V Y +L+ +Y + SH
Sbjct: 629 AMSYVEAMK-EAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLRSCNETQYPDVYTSH 687
Query: 279 LVN---AESSTLVEAE---KSITQRQ---WITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
+N +E S + +AE +S+ QR+ T+ ++ +Y G ++ QI K +R +
Sbjct: 688 CMNNLCSERSMVRKAEAIFESMKQRREANEFTFAMMLCMYKKNGRFEEATQIAKQMREMR 747
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
+Y +L Y + G KE E + S D S L +G+++KA
Sbjct: 748 ILTDPLSYNSVLGLYALDGRFKEAVETFKEMVSSGIQP-DDSTFKSLGTILIKLGMSKKA 806
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 87/205 (42%), Gaps = 3/205 (1%)
Query: 122 LSDSDYATRIDLMTKVFGIHSGERYFEGL-PLSAKTSETYTALLHLYAGAKWTEKAEELF 180
+S Y+ ID + + ER F ++ +T Y ++ Y +K EKA ELF
Sbjct: 469 MSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVLEYNVMIKAYGISKSCEKACELF 528
Query: 181 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 240
E + ++ + YN ++ + S +K +E+++ V D Y ISS
Sbjct: 529 ESMMSYGVTPDKCTYNTLVQILASADMPDKAKCYLEKMRETGYVSDCIPYCAVISSFVKL 588
Query: 241 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI 300
++ ++ EM + D V Y L+N + ++ A S E I +
Sbjct: 589 GQLNMAEEVYKEM-VEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNS-V 646
Query: 301 TYDFLIILYAGLGNKDKIDQIWKSL 325
Y+ LI LY +G D+ + I++ L
Sbjct: 647 IYNSLIKLYTKVGYLDEAEAIYRKL 671
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 88/199 (44%), Gaps = 8/199 (4%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
+S TY ++ Y + ++A E F+R+ + + + +N M+ +Y + GQ +V ++
Sbjct: 297 SSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHVYGNNGQFGEVTSLM 356
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275
+ +K + PD TYN+ IS +I++ + EM +G D V Y L+ + +
Sbjct: 357 KTMKF-HCAPDTRTYNILISLHTKNNDIERAGTYFKEMK-GAGLKPDPVSYRTLLYAF-S 413
Query: 276 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM--TKQKMT 333
+V + E + + + T L +Y + +++ W R M+
Sbjct: 414 IRRMVKEAEELIAEMDDNDVEIDEYTQSALTRMYI---EAEMLEKSWSWFRRVHVAGNMS 470
Query: 334 SRNYICILSSYLMLGHLKE 352
S Y + +Y G+L E
Sbjct: 471 SEGYSANIDAYGERGYLSE 489
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 71/149 (47%), Gaps = 9/149 (6%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKV-FGIHSGERYFEGLPL 152
+L+ L K+ ++++ + + M+ K +S Y T ID+ +K +H+ + +
Sbjct: 193 MLRILGKACKWRYVQSLWDEMI-RKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKI 251
Query: 153 SAKTSETYTAL-LHLYAGAKWTEKAEELF------ERVKQSNLSFNALMYNEMMTLYMSV 205
+ E T + L +Y A+ +KAEE F E S++ ++ YN M+ Y
Sbjct: 252 GMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKS 311
Query: 206 GQVEKVALVVEEIKRKNVVPDIFTYNLWI 234
GQ+++ + + + + +VP T+N I
Sbjct: 312 GQIKEASETFKRMLEEGIVPTTVTFNTMI 340
>gi|225454795|ref|XP_002274101.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27270-like [Vitis vinifera]
Length = 1071
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 110/251 (43%), Gaps = 11/251 (4%)
Query: 161 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 220
+ ++H A ++AE + R + L + + YN + + G++ + + +
Sbjct: 748 SKVVHALANYGKHQEAENVIRRSFEDGLELDTVAYNTFINAMLGAGRLHFANSIYDRMVS 807
Query: 221 KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS-GGSDDWVKYVNLVNIYITASHL 279
V P I TYN IS +D+ + ++ C G S D Y NL++ Y A
Sbjct: 808 LGVAPSIQTYNTMISVYGRGRKLDKAVEMFNKARCSGVGVSLDEKTYTNLISYYGKAGK- 866
Query: 280 VNAESSTLV-EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ E+S L E ++ + ++Y+ +I +YA G + ++++++ S Y+
Sbjct: 867 -SHEASLLFREMQEEGIKPGKVSYNIMINVYATAGLHHEAQELFQAMLRDGCSPDSLTYL 925
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC---NRLLGAFSDVGLTEKANEFHML 395
++ +Y E E I S ++ + +C N+LL AF+ G TE+A +
Sbjct: 926 ALIRAYTQSFKFLEAEETI----MSMQNEGVLPSCVHFNQLLSAFAKAGFTEEAERVYHT 981
Query: 396 LLQKNCAPTNA 406
LL +P A
Sbjct: 982 LLSAGLSPDVA 992
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 77/181 (42%), Gaps = 4/181 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
YT LL +Y + AE+ F + ++ + + M+ Y G+ + + +
Sbjct: 194 VYTILLRVYGQVGKIKLAEQAFLEMLEAGCEPDEVACGTMLCTYARWGRHKAMLSFYSAV 253
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + ++P I +N +SS +V EM D G + Y +++ +
Sbjct: 254 QERGIIPSIAVFNFMLSSLQKKSLHGKVIDLWREM-VDKGVVPNSFTYTVVIS-SLVKDG 311
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
LV T E + + +TY LI L + GN+D+ ++++ +R +++ NY
Sbjct: 312 LVEESFKTFYEMKNLGFVPEEVTYSLLISLSSKTGNRDEAIKLYEDMRY--RRIVPSNYT 369
Query: 339 C 339
C
Sbjct: 370 C 370
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
+ LL +A A +TE+AE ++ + + LS + Y M+ Y+ G VEK E+I
Sbjct: 959 FNQLLSAFAKAGFTEEAERVYHTLLSAGLSPDVACYRTMLRGYLDYGCVEKGITFFEQI- 1017
Query: 220 RKNVVPDIF 228
R++V PD F
Sbjct: 1018 RESVEPDRF 1026
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 90/237 (37%), Gaps = 39/237 (16%)
Query: 191 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 250
N+ Y +++ + G VE+ E+K VP+ TY+L IS + T N D+ K
Sbjct: 296 NSFTYTVVISSLVKDGLVEESFKTFYEMKNLGFVPEEVTYSLLISLSSKTGNRDEAIKLY 355
Query: 251 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYA 310
++M ++ +L+ +Y A S E EK+ + Y LI +Y
Sbjct: 356 EDMRYRRIVPSNYT-CASLLTLYYKNGDYSRA-VSLFSEMEKNKIVADEVIYGLLIRIYG 413
Query: 311 GLGNKDKIDQIWKSLR----MTKQK------------------------MTSRN------ 336
LG + ++ +K +T +K M SRN
Sbjct: 414 KLGLYEDAEKTFKETEQLGLLTNEKTYIAMAQVHLNSGNFEKALTIMELMRSRNIWFSRF 473
Query: 337 -YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
YI +L Y+M L S T D +CN +L + + L EKA +F
Sbjct: 474 SYIVLLQCYVMKEDLASAEATFQAL--SKTGLPDAGSCNDMLNLYIKLDLLEKAKDF 528
>gi|356534408|ref|XP_003535747.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35130-like [Glycine max]
Length = 357
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 107/257 (41%), Gaps = 15/257 (5%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
T+ETYT L++LY A + A LF + N Y ++ ++ G EK V
Sbjct: 40 TTETYTMLINLYGKAGKSFMALILFHEMTTHKCKPNICTYTALVNAFVREGLCEKAEEVF 99
Query: 216 EEIKRKNVVPDIFTYNLWI---------SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 266
E+++ + PD++ YN + S ++ + M C+ D Y
Sbjct: 100 EQMQEAGLEPDVYAYNALMETYKFSSPFSRAGYPYGAAEIFSLMQHMGCEP----DRASY 155
Query: 267 VNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 326
LV+ Y A +AE+ IT ++ L Y+ +GN +K ++I +
Sbjct: 156 NILVDAYGKAGFQDDAEAVFKDMKRVGITPTMK-SHMVLQSAYSKMGNVNKCEEILNQMC 214
Query: 327 MTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLT 386
+ K+ + +L+ Y LG ++ E++ + + + DIS N L+ + G
Sbjct: 215 KSGLKLNTYVLKSMLNLYGRLGQFGKMEEVL-RVMEKGSYVADISTYNILINRYGQAGXI 273
Query: 387 EKANEFHMLLLQKNCAP 403
E+ +F LL K P
Sbjct: 274 ERMEDFFQLLPSKGLKP 290
>gi|356552149|ref|XP_003544432.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Glycine max]
Length = 481
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 112/241 (46%), Gaps = 6/241 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEE-LFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
TY +++ Y A E+ ++ L + ++ N + N + Y + GQ++K+ +E
Sbjct: 232 TYNSIIDGYGKASMFEQMDDALNDMIENGNSHPDVFTLNSFVGAYGNAGQIDKMEKWYDE 291
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
+ + PDI T+N I S +++K +D M + V Y ++ ++ A
Sbjct: 292 FQLMGIKPDITTFNTMIKSYGKAGMYEKMKTVMDFME-KRFFTPTIVTYNTVIEVFGKAG 350
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
+ + L + ITY L+ Y+ +G DK+D I + + + + + +
Sbjct: 351 EIEKMDQHFLKMKHLGVKPNS-ITYCSLVSAYSKVGCIDKVDSIMRHVENSDVVLDTPFF 409
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDIS-ACNRLLGAFSDVGLTEKANEFHMLL 396
CI+S+Y G+LK++GE+ ++ +I+ AC ++ +++ G+TE ++
Sbjct: 410 NCIISAYGQAGNLKKMGELFLAMRERKCEPDNITFAC--MIQSYNTQGMTEAVQNLENMM 467
Query: 397 L 397
+
Sbjct: 468 I 468
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 106/241 (43%), Gaps = 4/241 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY LL + + E+A LFE + L +Y +++ Y G +++ VE++
Sbjct: 126 TYAKLLMMLGKCRQPEEASLLFEIMLSEGLKPTVDVYTALVSAYGQSGLLDQAFSTVEDM 185
Query: 219 KRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
K + PD++TY++ I CA D ++ L EMS G + V Y ++++ Y AS
Sbjct: 186 KSVVDCEPDVYTYSILIRCCAKFRRFDLIEHVLAEMS-YLGIKCNCVTYNSIIDGYGKAS 244
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
+ + E + T + + Y G DK+++ + ++ K +
Sbjct: 245 MFEQMDDALNDMIENGNSHPDVFTLNSFVGAYGNAGQIDKMEKWYDEFQLMGIKPDITTF 304
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 397
++ SY G +++ ++D ++ + I N ++ F G EK ++ H L +
Sbjct: 305 NTMIKSYGKAGMYEKMKTVMDFMEKRFFTP-TIVTYNTVIEVFGKAGEIEKMDQ-HFLKM 362
Query: 398 Q 398
+
Sbjct: 363 K 363
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 145/361 (40%), Gaps = 43/361 (11%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDS-DYATR 130
A NVI+ +S+G S ++ L + + + A ++ + M + + D Y T
Sbjct: 206 AYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEM--KRNGIAPDVYVYTTL 263
Query: 131 IDLMTKVFGIHSGERYFEGLPL--SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNL 188
ID K I +F+ + A TYTAL+H Y ++ KA E++E +
Sbjct: 264 IDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGC 323
Query: 189 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNV-VPD----------------IFTYN 231
+ N + Y ++ G++EK + + + +K++NV +PD +FTY
Sbjct: 324 TPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYG 383
Query: 232 LWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE 291
+ + + + L MS + G + V Y L++ A L EA+
Sbjct: 384 ALVDGLCKAYQVKEARDLLKSMSVE-GCEPNHVVYDALIDGCCKAGK--------LDEAQ 434
Query: 292 KSITQRQWITYDFLIILYAGLGN---KDK-IDQIWKSLRMTKQKMTSRNYICILSSYLML 347
+ T YD + Y+ L + KDK +D K L + + N + M+
Sbjct: 435 EVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTE---MI 491
Query: 348 GHLKEVGEIIDQWK-----QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCA 402
L +VG+ + +K + + ++ ++ F G EK E + K CA
Sbjct: 492 DGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCA 551
Query: 403 P 403
P
Sbjct: 552 P 552
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 84/196 (42%), Gaps = 9/196 (4%)
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSF 190
+DL K +G E G+ L+ ++ L G EKA + +
Sbjct: 168 LDLAEKAYG----EMLEAGVVLNKVNISNFSRCL---CGIGKFEKAYNVIREMMSKGFIP 220
Query: 191 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 250
+ Y++++ + +VEK + +E+KR + PD++ Y I S I+Q + +
Sbjct: 221 DTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWF 280
Query: 251 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYA 310
DEM D G + + V Y L++ Y+ + + A + K T +TY LI
Sbjct: 281 DEMERD-GCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTP-NIVTYTALIDGLC 338
Query: 311 GLGNKDKIDQIWKSLR 326
G +K QI+K ++
Sbjct: 339 KAGKIEKASQIYKIMK 354
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 49/94 (52%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
YT ++ T++A +L +++ + N + Y M+ + G+VEK +++++
Sbjct: 487 YTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMS 546
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
K P+ TY + I+ C +T +D+ K L+EM
Sbjct: 547 SKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEM 580
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 8/212 (3%)
Query: 111 SEWMVTH----KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLP-LSAKTSE-TYTALL 164
S W + H FV + ID + K+ + + FE L A+ +E YTAL+
Sbjct: 453 SAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALI 512
Query: 165 HLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVV 224
Y A+ A LF+R+ N++ +N ++ G+VE +V+ + + +
Sbjct: 513 DGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAK 572
Query: 225 PDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES 284
P + TY + I + D+ FLD+M SG + V Y + Y L+ AE
Sbjct: 573 PTVHTYTILIEEILRESDFDRANMFLDQMI-SSGCQPNVVTYTAFIKAYCRQGRLLEAEE 631
Query: 285 STLVEAEKSITQRQWITYDFLIILYAGLGNKD 316
+ E+ I +I YD L+ Y +G D
Sbjct: 632 MVVKIKEEGILLDSFI-YDVLVNAYGCIGQLD 662
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/279 (17%), Positives = 113/279 (40%), Gaps = 5/279 (1%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 184
+ T ++ K+ + + YF GL + TYT+L+ Y A ++FE +
Sbjct: 193 FNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMP 252
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
Q N + Y ++ + VG++++ + ++K PD+ TY + +++
Sbjct: 253 QEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKET 312
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 304
+ KF +EM ++G + Y L++ + + EK + + ++
Sbjct: 313 EALKFFEEMV-ENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVS-SVVPFNA 370
Query: 305 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
LI Y G + + S+++ K SR Y ++ + + ++++ ++
Sbjct: 371 LIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENK 430
Query: 365 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
S ++ N L+ + + A H L+++ P
Sbjct: 431 LSP-NLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVP 468
>gi|115466680|ref|NP_001056939.1| Os06g0172000 [Oryza sativa Japonica Group]
gi|55773690|dbj|BAD72273.1| putative PPR2 [Oryza sativa Japonica Group]
gi|113594979|dbj|BAF18853.1| Os06g0172000 [Oryza sativa Japonica Group]
gi|215697063|dbj|BAG91057.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218197679|gb|EEC80106.1| hypothetical protein OsI_21852 [Oryza sativa Indica Group]
gi|222635046|gb|EEE65178.1| hypothetical protein OsJ_20289 [Oryza sativa Japonica Group]
Length = 511
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 111/247 (44%), Gaps = 8/247 (3%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y L+ + K E+A ELF+ + + N Y +++ Y G+ ++ ++E++K
Sbjct: 163 YVKLITMLGKCKQPERAHELFQAMVDEGCAPNLESYTALVSAYSRSGRFDRAFSLLEQMK 222
Query: 220 -RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
PD+ TY++ I SC + ++VK +++M+ +G + V Y L++ Y A
Sbjct: 223 ATPGCRPDVQTYSILIKSCLHAYDFERVKYLMEDMA-RAGIRPNVVTYNTLIDAYGKAGR 281
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
ES+ L ++ W T + + + G G + ++ ++ + + + Y
Sbjct: 282 FAEMESTLLEMLTENCKPDVW-TMNSTLRAFGGSGQIETMESCYEKFQASGISPNIKTYN 340
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL-- 396
+L SY +++G ++ ++ Q + I N ++ AF G E+ L+
Sbjct: 341 ILLDSYGKAKMYEKMGAVM-EYMQKYYYSWTIVTYNVVIDAFGRAGDLEQMEYIFRLMKS 399
Query: 397 --LQKNC 401
++ NC
Sbjct: 400 ERIKPNC 406
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 116/254 (45%), Gaps = 5/254 (1%)
Query: 151 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 210
P +TY+ L+ A E+ + L E + ++ + N + YN ++ Y G+ +
Sbjct: 225 PGCRPDVQTYSILIKSCLHAYDFERVKYLMEDMARAGIRPNVVTYNTLIDAYGKAGRFAE 284
Query: 211 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 270
+ + E+ +N PD++T N + + + I+ ++ ++ SG S + Y L+
Sbjct: 285 MESTLLEMLTENCKPDVWTMNSTLRAFGGSGQIETMESCYEKFQA-SGISPNIKTYNILL 343
Query: 271 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 330
+ Y A + + + +K +TY+ +I + G+ ++++ I++ ++ +
Sbjct: 344 DSYGKA-KMYEKMGAVMEYMQKYYYSWTIVTYNVVIDAFGRAGDLEQMEYIFRLMKSERI 402
Query: 331 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG-LTEKA 389
K ++ +Y G +K++ ++ + S + DI N L+ AF VG L E
Sbjct: 403 KPNCVTLCSLVRAYGRAGDVKKIKTVLRIVENSDIT-LDIVFFNCLVDAFGRVGCLAEMW 461
Query: 390 NEFHMLLLQKNCAP 403
+ ++ LQ+ C P
Sbjct: 462 DVLDIMKLQR-CKP 474
>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
Length = 1095
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 105/244 (43%), Gaps = 3/244 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY+ALL+ Y A +L + ++ ++S N MY ++ + +G+V K +++ +
Sbjct: 406 TYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCM 465
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ PD+ TY+ I+ I + K+ L M SG + V Y LV + A H
Sbjct: 466 LADGIDPDVITYSALINGMCKMGMIHETKEILSRMQ-KSGVLPNNVLYTTLVFYFCKAGH 524
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
A V+ +S + ++ L+ + G + +Q + + K ++
Sbjct: 525 AKEA-LKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFN 583
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
CI+ SY G++ E + D + DI LL G +A EF + LL+
Sbjct: 584 CIIDSYCQRGNVLEAFSVYDNMVRHGWPP-DICTYGSLLRGLCQGGHLVQAKEFMVYLLE 642
Query: 399 KNCA 402
K CA
Sbjct: 643 KACA 646
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 88/207 (42%), Gaps = 2/207 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY ++ K + +A L +R+++ NL+ + YN ++ + G++ + ++
Sbjct: 301 TYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQM 360
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
R+++ P + TY I D+ ++ L EM +G + Y L+N Y S
Sbjct: 361 LRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQI-TGVRPSELTYSALLNGYCKHSK 419
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L A +SI+ + + Y LI + LG K QI K + Y
Sbjct: 420 LGPALDLIKYLRSRSISINRTM-YTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYS 478
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSAT 365
+++ +G + E EI+ + ++S
Sbjct: 479 ALINGMCKMGMIHETKEILSRMQKSGV 505
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 43/229 (18%), Positives = 96/229 (41%), Gaps = 4/229 (1%)
Query: 175 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 234
KAE + +++K L NA+ YN ++ Y+ G+ + +++++++ + D++TYN+ I
Sbjct: 248 KAESMLQKMKNCRLP-NAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMI 306
Query: 235 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 294
+ L M + + D Y L++ + +N + +
Sbjct: 307 DKLCKLKRSARAYLLLKRMR-EVNLTPDECSYNTLIHGFFGEGK-INLAIYIFNQMLRQS 364
Query: 295 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 354
+ TY LI Y G D+ ++ +++T + + Y +L+ Y L
Sbjct: 365 LKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPAL 424
Query: 355 EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
++I ++ +S + + + L+ F +G KA + +L P
Sbjct: 425 DLI-KYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDP 472
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 97/245 (39%), Gaps = 2/245 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY+ LL Y A E++ EL + V L +ALMY ++M ++ + ++EE+
Sbjct: 84 TYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEM 143
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
R P + T+N IS C N++ L M+ SG D V Y L++ A
Sbjct: 144 IRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMA-ASGVKADVVTYNTLMDGLCKAGR 202
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L AE L + S + Y + G Q+ + +R + Y
Sbjct: 203 LQEAE-QLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYN 261
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
IL G + E+++Q S ++ + ++ +G T++A + +
Sbjct: 262 TILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMAR 321
Query: 399 KNCAP 403
C P
Sbjct: 322 AGCRP 326
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 109/257 (42%), Gaps = 13/257 (5%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+ A ++AE+L ER+K S + + + Y+ + G+V V+E++
Sbjct: 189 TYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQM 248
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + P++ TYN + + ID + +++M+ G + V Y +V+
Sbjct: 249 RDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGR 308
Query: 279 LVNAESSTLVEA-EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR---MTKQKMTS 334
E+ +++EA ++ + +TY L+ GL KI++ +++R M K +
Sbjct: 309 --TQEARSVMEAMARAGCRPDVVTYSSLV---NGLCKAGKIEEAVEAVREMAMEGCKPNA 363
Query: 335 RNYICILSSYLMLGHLKEVGEIIDQWKQSAT----SDFDISACNRLLGAFSDVGLTEKAN 390
Y ++ G L E ++++ +S N L+G G + A
Sbjct: 364 VTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDAL 423
Query: 391 EFHMLLLQKNCAPTNAS 407
+F + + C P S
Sbjct: 424 KFFQRMRSQGCDPDGVS 440
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 82/207 (39%), Gaps = 8/207 (3%)
Query: 71 SATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATR 130
+A V+++ + V IL L KS + ALE+ E M + L+ Y+T
Sbjct: 240 NAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTV 299
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNL 188
+D + K+ E + + + TY++L++ A E+A E +
Sbjct: 300 VDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGC 359
Query: 189 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK-----NVVPDIFTYNLWISSCAATLNI 243
NA+ Y ++ S G++ + +VEE+ + P + TYN I I
Sbjct: 360 KPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRI 419
Query: 244 DQVKKFLDEMSCDSGGSDDWVKYVNLV 270
D KF M G D V Y +V
Sbjct: 420 DDALKFFQRMR-SQGCDPDGVSYSTIV 445
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 94/217 (43%), Gaps = 9/217 (4%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTH--KEFVLSDSDYAT 129
A +++Q + G +A V ++ L K+ R + A ++ E M V++ S +
Sbjct: 171 ADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVY 230
Query: 130 RIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSN 187
+ KV H + E + S TY +L + + A E+ E++ S+
Sbjct: 231 GLCKSGKVLNAH---QVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSD 287
Query: 188 -LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 246
N + Y+ ++ +G+ ++ V+E + R PD+ TY+ ++ I++
Sbjct: 288 GCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEA 347
Query: 247 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAE 283
+ + EM+ + G + V Y +LV+ + L AE
Sbjct: 348 VEAVREMAME-GCKPNAVTYCSLVHGLCSCGRLAEAE 383
>gi|297743427|emb|CBI36294.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 83/191 (43%), Gaps = 9/191 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
Y +LL ++A +LF + + L+ +A Y+ + Y V + V++ +
Sbjct: 229 AYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRM 288
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+R N+VP++FTYN + + +D+ + LDEM + G S D Y N + +
Sbjct: 289 RRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEM-IERGVSPDLWSY-NAIQAFHCDHC 346
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
VN + EK TY+ ++ + +G D++ +W M R +
Sbjct: 347 EVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGG-------MEERGFY 399
Query: 339 CILSSYLMLGH 349
S+Y ++ H
Sbjct: 400 PAASTYAVMVH 410
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 163 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 222
LL++ K ++A+E F++V + NA Y+ +M + VG + + EE++ +
Sbjct: 164 LLYVLCKRKHVKQAQEFFDKVNVEVMP-NAKTYSILMRGWGDVGDSSEARKLFEEMRERG 222
Query: 223 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 282
D+ YN + + N+D+ K EM +G + D Y + Y + + +A
Sbjct: 223 CAVDVVAYNSLLEALCKGGNVDEAYKLFREMG-SNGLAPDACSYSIFIRAYCEVNDIHSA 281
>gi|449453081|ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
gi|449489420|ref|XP_004158306.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
Length = 720
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 115/256 (44%), Gaps = 23/256 (8%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+ YA E A L ++++ N+ N +++ ++ Y G+ +K V+ E+
Sbjct: 388 TYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLREM 447
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K NV PD YN+ I + +D + D M G D V + L++ + H
Sbjct: 448 KNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRM-LSEGIEPDVVTWNTLIDCH--RKH 504
Query: 279 LVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 334
+ ++ L E + +R ++ TY+ +I LG ++K W +++ KM S
Sbjct: 505 GYHDRAAELFE---EMQERGYLPCPTTYNIMI---NSLGEQEK----WDEVKILLGKMQS 554
Query: 335 RNYICILSSYLML----GHLKEVGEIIDQWKQSATSDFDISAC--NRLLGAFSDVGLTEK 388
+ + + +Y L GH + ID + ++ SA N L+ AF+ GL+E+
Sbjct: 555 QGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAFAQRGLSEQ 614
Query: 389 ANEFHMLLLQKNCAPT 404
A + +++ P+
Sbjct: 615 AVNAYRVMISDGLRPS 630
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 97/235 (41%), Gaps = 19/235 (8%)
Query: 177 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 236
++L+E ++ + + L+ N+++ + G + + ++ + P T+ IS+
Sbjct: 266 QKLYEEIESDKIELDGLLLNDIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFVAVISA 325
Query: 237 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN-LVNIYITASHLVNAESSTLVEAEKSIT 295
++ + +EM GG +K N L+ Y L AES + E EKS
Sbjct: 326 LGNHGRTEEAEAIFEEMK--EGGLKPRIKAFNALLKGYARKGSLKEAES-IISEMEKSGL 382
Query: 296 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN-------YICILSSYLMLG 348
TY L+ YA +G W+S R ++M +RN + IL+SY G
Sbjct: 383 SPDEHTYGLLVDAYANVGR-------WESARHLLKQMEARNVQPNTFIFSRILASYRDRG 435
Query: 349 HLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
++ E++ + K S D N ++ F + A E + +L + P
Sbjct: 436 EWQKTFEVLREMKNSNVKP-DRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEP 489
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 152 LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 211
L+ KTS T+ A++ TE+AE +FE +K+ L +N ++ Y G +++
Sbjct: 312 LNPKTS-TFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEA 370
Query: 212 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
++ E+++ + PD TY L + + A + + L +M
Sbjct: 371 ESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQM 412
Score = 38.1 bits (87), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 101/247 (40%), Gaps = 12/247 (4%)
Query: 160 YTALLHLYAGAKWTEKAEELFER-VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
Y+ L+H ++E+L+E + + L YN ++ +EK ++ +
Sbjct: 182 YSILIHALG------RSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRM 235
Query: 219 KRKNVVPDIFTYNLWISSCAAT--LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
++ D Y+L I S T ++I ++K +E+ D D + +N + +
Sbjct: 236 RQDGFQSDFINYSLIIQSLTRTNKIDIPLLQKLYEEIESDKIELDGLL--LNDIILGFAK 293
Query: 277 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 336
+ N L + S + T+ +I G ++ + I++ ++ K +
Sbjct: 294 AGDPNRALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKA 353
Query: 337 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 396
+ +L Y G LKE II + ++S S D L+ A+++VG E A +
Sbjct: 354 FNALLKGYARKGSLKEAESIISEMEKSGLSP-DEHTYGLLVDAYANVGRWESARHLLKQM 412
Query: 397 LQKNCAP 403
+N P
Sbjct: 413 EARNVQP 419
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 97/205 (47%), Gaps = 6/205 (2%)
Query: 129 TRIDLMTKVFGIHSGERYF---EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQ 185
T +D M K I+ +F +G L + TYTAL+ + EKA ELF+ + +
Sbjct: 456 TLVDGMCKHGRINGAVEFFNEMQGKGLKG-NAVTYTALIRAFCNVNNIEKAMELFDEMLE 514
Query: 186 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 245
+ S +A++Y +++ G++++ + V+ ++K PDI ++N+ I+ +D+
Sbjct: 515 AGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDE 574
Query: 246 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFL 305
+ L EM ++G D V Y L++ + A ++ + +TY L
Sbjct: 575 AYEMLKEME-NAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVP-TVVTYGAL 632
Query: 306 IILYAGLGNKDKIDQIWKSLRMTKQ 330
I Y GN D+ +I++ + T +
Sbjct: 633 IHAYCLNGNLDEAMKIFRDMSSTSK 657
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 107/249 (42%), Gaps = 12/249 (4%)
Query: 85 QATVSELRHILKELRKSQRYKHALEISEWM-VTHKEFVLSDSD---YATRIDLMTKVFGI 140
Q V ++ L K +R ALE+ E M L + D Y T ID + KV
Sbjct: 337 QPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQ 396
Query: 141 HSGERYFEGL---PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 197
G E + P + TY L+ Y A E A ELF+++ + + N + N
Sbjct: 397 EEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNT 456
Query: 198 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 257
++ G++ E++ K + + TY I + NI++ + DEM ++
Sbjct: 457 LVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEM-LEA 515
Query: 258 GGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 317
G S D + Y L++ A L A S L + +++ ++++ LI G K+K
Sbjct: 516 GCSPDAIVYYTLISGLSQAGKLDRA-SFVLSKMKEAGFSPDIVSFNVLI---NGFCRKNK 571
Query: 318 IDQIWKSLR 326
+D+ ++ L+
Sbjct: 572 LDEAYEMLK 580
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/113 (18%), Positives = 55/113 (48%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
++ L++ + ++A E+ + ++ + + + + YN +++ + G +++++
Sbjct: 558 SFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKM 617
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
++ +VP + TY I + N+D+ K +MS S + V Y L+N
Sbjct: 618 VKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILIN 670
>gi|449438488|ref|XP_004137020.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 146
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 62/131 (47%), Gaps = 24/131 (18%)
Query: 55 KDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWM 114
+D L R++R P+ S V+ +WV EG Q S+L+ ++K+LRK R+ AL++ EW+
Sbjct: 35 EDTLFRRVYRAGDPRTSIVRVLDQWVEEGRQVKQSDLQTLIKQLRKFGRFNQALQLCEWV 94
Query: 115 VTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE 174
+ LS D A KT +Y A+L+LYA E
Sbjct: 95 RNERNQCLSTGDIAV------------------------VKTPLSYNAMLNLYAHLGKHE 130
Query: 175 KAEELFERVKQ 185
K EL + +++
Sbjct: 131 KLAELLKEMEE 141
>gi|359490016|ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Vitis vinifera]
Length = 1442
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 140/324 (43%), Gaps = 9/324 (2%)
Query: 85 QATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFG-IHSG 143
Q T ++ ++K + +S ++ ALE+ EW+ + + AT + ++ K +
Sbjct: 150 QMTPTDFCFVVKWVGQSS-WQRALEVYEWLNLRHWYSPNARMLATILSVLGKANQEALAV 208
Query: 144 ERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM 203
E + S T + Y A++ +YA K +EL + ++ + + +N ++ +
Sbjct: 209 EIFARAEAASGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARL 268
Query: 204 SVG-QVEKVAL-VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD 261
G V +A+ ++ E++R + PDI TYN IS+C+ N+++ K ++M D
Sbjct: 269 KSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPD 328
Query: 262 DWVKYVNLVNIYITASHLVNAESSTLV-EAEKSITQRQWITYDFLIILYAGLGNKDKIDQ 320
W Y ++++Y ++ E+ L + E +TY+ L+ +A GN DK+ +
Sbjct: 329 LWT-YNAMISVYGRCG--MSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKE 385
Query: 321 IWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAF 380
I + + Y I+ Y G ++ K S S D L+ +
Sbjct: 386 ICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSP-DAVTYTVLIDSL 444
Query: 381 SDVGLTEKANEFHMLLLQKNCAPT 404
+ ++A E +L PT
Sbjct: 445 GKANMIKEAAEVMSEMLNARVKPT 468
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/215 (17%), Positives = 101/215 (46%), Gaps = 3/215 (1%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
+ ++L LY G +K ++++ ++++ L + YN ++ +Y + E+ ++ E++
Sbjct: 925 WNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMR 984
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
R + P + TY IS+ ++Q ++ + + D ++ ++ ++ + +
Sbjct: 985 RVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHI-MMKMFRNSGNH 1043
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 339
AE V E + + T L++ Y+G G ++ +++ +L++ +++ Y
Sbjct: 1044 SKAEKLLGVMKEAGV-EPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSS 1102
Query: 340 ILSSYLMLG-HLKEVGEIIDQWKQSATSDFDISAC 373
++ +YL G H + ++++ K D I C
Sbjct: 1103 VIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTC 1137
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 47/244 (19%), Positives = 105/244 (43%), Gaps = 3/244 (1%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
+ + AL+H YA + E+A +F + + S N +M + G+++++ +V++E
Sbjct: 783 KVWNALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQE 842
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
++ + L + + A NI +VKK M +G Y ++ +
Sbjct: 843 LQDMGFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKA-AGYFPTMHLYRIMIGLLAKGK 901
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
+ + E + + E E + + ++ ++ LY G+G+ K Q+++ ++ K Y
Sbjct: 902 RVRDVE-AMVSEMEVARFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTY 960
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 397
++ Y +E ++ + ++ + L+ AF + + E+A E LL
Sbjct: 961 NTLILMYCRDRRPEEGLSLMHEMRRVGLEP-KLDTYKSLISAFGKLQMVEQAEELFEGLL 1019
Query: 398 QKNC 401
K C
Sbjct: 1020 SKEC 1023
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
+TY +L+ + + E+AEELFE + + Y+ MM ++ + G K ++
Sbjct: 993 DTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGV 1052
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274
+K V P I T +L + S + + ++ +K LD + + G + Y ++++ Y+
Sbjct: 1053 MKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVE-GLPLSTLPYSSVIDAYL 1108
>gi|414888269|tpg|DAA64283.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 616
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 122/299 (40%), Gaps = 44/299 (14%)
Query: 147 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 206
F LP ++T+ +YT+L+ YA E+A L +++K + ++ A YN ++
Sbjct: 164 FHDLPAESRTALSYTSLIAAYARNALHEEARALLDQMKATGVAPTAATYNTVLAACARAT 223
Query: 207 ----QVEKVALVVEEIKR---KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG 259
+ + + E++ +V PD+ TYN +++ A DQ + L M ++G
Sbjct: 224 DPPVPFDMLLGLFAEMRHDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTM-LEAGV 282
Query: 260 SDDWVKYVNLVNIYITASHLVNA-----------------------ESSTLV--EAEKSI 294
S D V Y ++V+ + +A +L A E+ T V A+
Sbjct: 283 SPDTVSYRHIVDAFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHTRVGATADAVA 342
Query: 295 TQRQW---------ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYL 345
RQ TY L+ LY G D + Q+++ +R T+ Y + +
Sbjct: 343 VLRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRQLFREMRTAVPPDTA-TYNVLFRVFG 401
Query: 346 MLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 404
G KEV E+ ++ D+ C ++ A GL A E + ++ PT
Sbjct: 402 DGGFFKEVVELFHDMLKTGVQP-DMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPT 459
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 135/346 (39%), Gaps = 49/346 (14%)
Query: 98 LRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGE-----RYFEGLPL 152
L K R + A+E+ E M H D T L+T + GE + F+ +
Sbjct: 159 LGKVGRSQKAMELLEEMERHG----CPPDVMTYSSLITGLG--KDGETVKAFKLFQEMKR 212
Query: 153 SAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 210
+ + T+TAL+ A + A EL + +K+ + + YN ++ + VG + +
Sbjct: 213 RGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVE 272
Query: 211 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 270
+++E+KR PD+ TY+ I+ +D+ + L +M G D + Y L+
Sbjct: 273 AYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKME-KEGCPPDTITYNTLI 331
Query: 271 NIY-------------------------ITASHLVNA-------ESSTLV--EAEKSITQ 296
N +T S L+ A ES+ ++ E E Q
Sbjct: 332 NGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQ 391
Query: 297 RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 356
TY +I + G D D+++ +R Y L+S G KE +I
Sbjct: 392 PDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKI 451
Query: 357 IDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCA 402
+ K+S D++ + LL S + A L+++ CA
Sbjct: 452 FEDMKESGLLP-DVATYDALLLGLSKTKEVDDACGLLKELIEQGCA 496
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 97/245 (39%), Gaps = 3/245 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+ A +A LF +++ + YN ++ VG+ +K ++EE+
Sbjct: 116 TYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEM 175
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+R PD+ TY+ I+ + K EM G D + + L++ A
Sbjct: 176 ERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMK-RRGRKPDSITFTALMDALGKAGR 234
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ +A L E ++ + +TY+ LI + +G+ + + ++ K Y
Sbjct: 235 VDDA-LELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYS 293
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
C+++ + L E +++ + ++ D N L+ GL A +
Sbjct: 294 CLITGLIKASQLDEACQVLKKMEKEGCPP-DTITYNTLINGLGKAGLLNDAGRLFDRMKS 352
Query: 399 KNCAP 403
K C P
Sbjct: 353 KGCNP 357
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 97/231 (41%), Gaps = 3/231 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +L++ ++KA EL E +++ + + Y+ ++T G+ K + +E+
Sbjct: 151 TYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEM 210
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
KR+ PD T+ + + +D + LDEM + G V Y L+ +
Sbjct: 211 KRRGRKPDSITFTALMDALGKAGRVDDALELLDEMK-ERGVKPGVVTYNALIAGFGKVGD 269
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
LV A + L E +++ + +TY LI D+ Q+ K + + Y
Sbjct: 270 LVEA-YNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYN 328
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
+++ G L + G + D+ K S + D+ + L+ A E A
Sbjct: 329 TLINGLGKAGLLNDAGRLFDRMK-SKGCNPDVVTYSTLITALGKAARVESA 378
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 107/279 (38%), Gaps = 36/279 (12%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +LL+ A A E+A+ LFE +K + + + + Y+ ++ G+ E VV E+
Sbjct: 11 TYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEM 70
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ K P+++TYN + D+ + L EM D+G D Y L++ A
Sbjct: 71 QAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMR-DNGCVPDVRTYNCLISTLGKAGR 129
Query: 279 LVNAES----------------------------------STLVEAEKSITQRQWITYDF 304
L A + L E E+ +TY
Sbjct: 130 LSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSS 189
Query: 305 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
LI G K ++++ ++ +K S + ++ + G + + E++D+ K+
Sbjct: 190 LITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERG 249
Query: 365 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
+ N L+ F VG +A + + C P
Sbjct: 250 VKP-GVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKP 287
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 67/148 (45%), Gaps = 3/148 (2%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 184
Y+T I + K + S FE + + TY +++ + A + A+ LF ++
Sbjct: 362 YSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMR 421
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
LS + + YN + G+ ++ + E++K ++PD+ TY+ + + T +D
Sbjct: 422 GKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVD 481
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNI 272
L E+ + G + D +K+ + I
Sbjct: 482 DACGLLKEL-IEQGCAFDSLKFDECLEI 508
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 77/215 (35%), Gaps = 38/215 (17%)
Query: 189 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 248
S N + YN ++ GQ E+ L+ EE+K PD+ +Y+ I+S
Sbjct: 6 SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSL----------- 54
Query: 249 FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIIL 308
G + W + +V AE K W TY+ L+
Sbjct: 55 ---------GRAGKWEAALEVV-----------AEMQA-----KGCKPNLW-TYNTLVDC 88
Query: 309 YAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDF 368
G D+ ++ +R R Y C++S+ G L E + + ++
Sbjct: 89 LGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVP- 147
Query: 369 DISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
D N L+ VG ++KA E + + C P
Sbjct: 148 DTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPP 182
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%)
Query: 173 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 232
++A EL + L A YN ++ G+V + +E++K + PDI +Y+
Sbjct: 515 VDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSS 574
Query: 233 WISSCAATLNIDQVKKFLDEMS 254
IS+ T ID + L+EMS
Sbjct: 575 LISALGQTGQIDTAFELLEEMS 596
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 14/231 (6%)
Query: 121 VLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELF 180
+L D A ++L+ K+ G G G+P T Y+ L + A+ + A+++F
Sbjct: 216 LLKDLLRADAMELVWKLKGFMEGA----GIPPDVYT---YSTFLEAHCKARDFDAAKKVF 268
Query: 181 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 240
E +++ + + N + YN M++ G VE+ EE+ + PD FTY ++
Sbjct: 269 EEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKG 328
Query: 241 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI 300
+ + K LDEMSC SG + V Y LV+ ++ A L E + Q I
Sbjct: 329 GRLKEAKALLDEMSC-SGLKPNVVVYATLVDGFMKEGKAAEA-FDILNEMISAGVQPNKI 386
Query: 301 TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLK 351
YD LI +G + ++ + + + Y LM GH +
Sbjct: 387 MYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTY-----HPLMQGHFQ 432
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 127/294 (43%), Gaps = 13/294 (4%)
Query: 70 RSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDS-DYA 128
+ A N+++ +SEG + ++ K A E E M K VL D Y
Sbjct: 472 KEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMT--KANVLPDLFCYN 529
Query: 129 TRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQS 186
+ I ++ V I E Y+ + + TY+ L+H Y + EKA++L +++ S
Sbjct: 530 SLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNS 589
Query: 187 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 246
L NA Y +++ Y EKV+ +++ + PD Y + I + + + N++
Sbjct: 590 GLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVA 649
Query: 247 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI 306
L E+ +G D Y +L++ + + A L E K + + Y+ LI
Sbjct: 650 FMVLTEVE-KNGLVPDLHIYSSLISGLCKMADMEKA-VGLLDEMAKEGLEPGIVCYNALI 707
Query: 307 ILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW 360
+ G+ + ++ S+ + K + + C+ + L+ G+ K G+I D +
Sbjct: 708 DGFCRSGDISRARNVFDSI-LAKGLLPN----CVTYTALIDGNCKN-GDITDAF 755
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 77/179 (43%), Gaps = 2/179 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +++ +++A L E + L NA MY ++ + G + +E +
Sbjct: 457 TYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENM 516
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ NV+PD+F YN I + I++ +++ ++ G D Y L++ Y +
Sbjct: 517 TKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQ-KRGLVPDEFTYSGLIHGYCKTRN 575
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
L A+ L + S + TY L+ Y + +K+ I +S+ + K + Y
Sbjct: 576 LEKAD-QLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIY 633
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 87/194 (44%), Gaps = 7/194 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY+ + + A+ + A+++FE +++ + + N + YN M++ G VE+ EE+
Sbjct: 245 TYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEM 304
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ PD FTY ++ + + K LDEMSC SG + V Y LV+ ++
Sbjct: 305 VDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSC-SGLKPNIVVYGTLVDGFMKEGK 363
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
A L E + Q I YD LI +G + ++ K + + + Y
Sbjct: 364 TAEA-FDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTY- 421
Query: 339 CILSSYLMLGHLKE 352
+ LM GH ++
Sbjct: 422 ----NPLMQGHFQQ 431
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 123/296 (41%), Gaps = 17/296 (5%)
Query: 70 RSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMV---THKEFVLSDSD 126
+ A N+++ +SEG + ++ K A E E M H +
Sbjct: 470 KEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFC---- 525
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 184
Y + I ++ V + E Y+ + + TY+ L+H Y EKA++L ++
Sbjct: 526 YNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQML 585
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
S L NA Y +++ Y EKV+ +++ + PD Y + I + + + N++
Sbjct: 586 NSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENME 645
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 304
L E+ +G D Y +L++ + + A L E K + + Y+
Sbjct: 646 VAFMVLTEVE-KNGLVPDLHIYSSLISGLCKIADMEKA-VGLLDEMAKEGLEPGIVCYNA 703
Query: 305 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW 360
LI + G+ + ++ S+ + K + + C+ + L+ G+ K G+I D +
Sbjct: 704 LIDGFCRSGDISRARNVFDSI-LAKGLVPN----CVTYTALIDGNCKN-GDITDAF 753
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 83/199 (41%), Gaps = 2/199 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+ + + A EL ++ S + N Y M+ G+ ++ ++EE+
Sbjct: 420 TYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEM 479
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + P+ F Y I + NI + L++M+ + D Y +L+ T
Sbjct: 480 ISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMT-KANVHPDLFCYNSLIKGLSTVGR 538
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ AE ++ + ++ TY LI Y GN +K DQ+ + + + K + Y
Sbjct: 539 MEEAEEYYAQVQKRGLVPDEF-TYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYT 597
Query: 339 CILSSYLMLGHLKEVGEII 357
+L Y ++V I+
Sbjct: 598 DLLEGYFKSNDYEKVSSIL 616
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 72/165 (43%), Gaps = 2/165 (1%)
Query: 173 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 232
+++A L E + L NA MY ++ + G + +E++ + NV PD+F YN
Sbjct: 469 SKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNS 528
Query: 233 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 292
I + +++ +++ ++ G D Y L++ Y +L A+ L +
Sbjct: 529 LIKGLSTVGRMEEAEEYYAQVQ-KRGLVPDEFTYSGLIHGYCKTGNLEKAD-QLLRQMLN 586
Query: 293 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
S + TY L+ Y + +K+ I +S+ + K + Y
Sbjct: 587 SGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIY 631
>gi|414591641|tpg|DAA42212.1| TPA: hypothetical protein ZEAMMB73_141452 [Zea mays]
Length = 472
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 100/230 (43%), Gaps = 3/230 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +++H A+ +KAE ++ + N YN ++ Y S GQ ++ V +E+
Sbjct: 222 TYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 281
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+R +++PD+ T ++ + S I + + D M+ G + D Y ++N Y T
Sbjct: 282 RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAM-KGQNPDVFSYNIMLNGYATKGC 340
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
LV+ + I + T++ I YA G DK I+ +R K Y
Sbjct: 341 LVDMTDLFDLMLGDGIAP-DFYTFNVQIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYR 399
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEK 388
++++ +G + + E +Q + D A N L+ F G+ K
Sbjct: 400 TVIAALCRIGKMDDAMEKFNQMIDQGVAP-DKYAYNCLIQGFCTHGILLK 448
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 56/293 (19%), Positives = 107/293 (36%), Gaps = 39/293 (13%)
Query: 148 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 207
+G + + TS TY L+ A E A F ++ ++ L +A++ + ++ + +
Sbjct: 68 QGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKR 127
Query: 208 V-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM------------- 253
E + +++ VPD+F+YN+ + S Q L M
Sbjct: 128 TDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVA 187
Query: 254 ----------------SCD-------SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 290
+CD G D V Y ++V+ A + AE+
Sbjct: 188 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMV 247
Query: 291 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 350
K + W TY+ LI Y+ G + +++K +R ++ S G +
Sbjct: 248 NKRVLPNNW-TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKI 306
Query: 351 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
KE ++ D + D+ + N +L ++ G + L+L AP
Sbjct: 307 KEARDVFDTMAMKGQNP-DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAP 358
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 45/233 (19%), Positives = 95/233 (40%), Gaps = 5/233 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSN--LSFNALMYNEMMTLYMSVGQVEKVALVVE 216
+Y LL + +A+ L + + S + + YN ++ + G V K + +
Sbjct: 150 SYNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFK 209
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
E+ ++ + PD+ TYN + + +D+ + FL +M ++W Y NL+ Y +
Sbjct: 210 EMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWT-YNNLIYGYSST 268
Query: 277 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 336
A E + +T L+ G + ++ ++ M Q +
Sbjct: 269 GQWKEA-VRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFS 327
Query: 337 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
Y +L+ Y G L ++ ++ D + D N + A+++ G+ +KA
Sbjct: 328 YNIMLNGYATKGCLVDMTDLFDLMLGDGIAP-DFYTFNVQIKAYANCGMLDKA 379
>gi|115456295|ref|NP_001051748.1| Os03g0824100 [Oryza sativa Japonica Group]
gi|113550219|dbj|BAF13662.1| Os03g0824100, partial [Oryza sativa Japonica Group]
Length = 691
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 115/285 (40%), Gaps = 31/285 (10%)
Query: 147 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLS-------FNALM----- 194
F LP ++T+ +YT+L+ YA E+A EL +++K S ++ F+ L+
Sbjct: 2 FHDLPSESRTALSYTSLIAAYARNALHEEARELLDQMKASGVAPTDPPVPFDMLLGLFAE 61
Query: 195 ---------------YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 239
YN ++ ++ +++ + V+PD +Y + + A
Sbjct: 62 MRHDPSPSVRPDLTTYNTLLAAAAVRALSDQSEMLLRTMLEAGVLPDTASYRHIVDAFAG 121
Query: 240 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 299
N+ +V + EMS +G + D Y+ L+ + A + L + +
Sbjct: 122 AGNLSRVAELFAEMSA-TGHTPDPSAYLGLMEAHTLVGATAEA-VAVLRQMQADGCPPTA 179
Query: 300 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 359
TY L+ LY G D + ++++ +R T T+ Y + + G KEV E+
Sbjct: 180 ATYRVLLDLYGRQGRFDGVRELFREMRTTVPPDTA-TYNVLFRVFGDGGFFKEVVELFQD 238
Query: 360 WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 404
S DI C ++ A GL E A E + + PT
Sbjct: 239 MLHSEVEP-DIDTCENVMVACGRGGLHEDAREVLDYITTEGMVPT 282
>gi|296090624|emb|CBI41008.3| unnamed protein product [Vitis vinifera]
Length = 379
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 102/237 (43%), Gaps = 5/237 (2%)
Query: 171 KWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 230
+W E E L E+ K ++S +++LY G + V +E+ + + ++
Sbjct: 84 RWIE--EILEEQKKYKDISREGFAVR-LISLYGKSGMFDHAFKVFDEMPDQKCERSVLSF 140
Query: 231 NLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 290
N + +C + D++ F E+ + G D V Y +VN + L +A S L E
Sbjct: 141 NALLGACVHSKKFDKIDGFFQELPGNLGVVPDVVSYNIIVNAFCEMGSLDSA-LSVLDEM 199
Query: 291 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 350
EK + IT++ L+ + G+ ++IW ++ R+Y L + +
Sbjct: 200 EKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKLRGVISENRM 259
Query: 351 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
E E+ID+ K S D+ N L+ F + G E+A ++ + + P A+
Sbjct: 260 SEAVELIDEMKTSGIKP-DVFTLNSLMKGFCNAGNLEEAKRWYSEIARNELPPVRAT 315
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/96 (20%), Positives = 51/96 (53%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+ LL+ + E++++ +K++N++ N YN + +S ++ + +++E+
Sbjct: 210 TFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKLRGVISENRMSEAVELIDEM 269
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 254
K + PD+FT N + N+++ K++ E++
Sbjct: 270 KTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIA 305
>gi|222630937|gb|EEE63069.1| hypothetical protein OsJ_17877 [Oryza sativa Japonica Group]
Length = 702
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 99/215 (46%), Gaps = 3/215 (1%)
Query: 151 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-E 209
P S YT +LH + A E+A +LF +++ + + YN ++ +Y +G+
Sbjct: 83 PGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWP 142
Query: 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
++ ++EE++ V PD FT + I++C +DQ F +++ G V Y L
Sbjct: 143 RIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKA-RGHVPCVVTYNAL 201
Query: 270 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
+ ++ A + A L E E S Q +TY+ L YA G ++ + ++
Sbjct: 202 LQVFGKAGNYTEA-LRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKG 260
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
+ Y ++++Y +G + E + D+ K++
Sbjct: 261 LLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNG 295
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 106/252 (42%), Gaps = 9/252 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY ALL ++ A +A + + ++ S +A+ YNE+ Y G E+ A ++ +
Sbjct: 197 TYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTM 256
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI---YIT 275
K ++P+ FTYN +++ A +D+ D M + +V VN N+ +
Sbjct: 257 TSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMK-----KNGYVPNVNTYNLIFGMLG 311
Query: 276 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
A L E +S +T++ ++ + G +D + ++ ++ +++
Sbjct: 312 KKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRD 371
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 395
Y ++S+Y G ++ D+ S + ++ N LL S G A
Sbjct: 372 TYNTLISAYGRCGSRTYAFKMYDEMISSGFTPC-LTTYNALLNVLSRQGDWSTAQSIVSK 430
Query: 396 LLQKNCAPTNAS 407
+L+ P + S
Sbjct: 431 MLKNGFKPNDQS 442
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 1/114 (0%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
+ ++L +YA KA E+F+ +KQS LS + + YN +M +Y + + +++++K
Sbjct: 513 FNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLK 572
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
V PD+ +YN I+ I + ++ L EM D G + V Y LV Y
Sbjct: 573 SSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIAD-GMAPCVVTYHTLVGGY 625
Score = 41.2 bits (95), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 59/139 (42%), Gaps = 2/139 (1%)
Query: 174 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 233
E E+ F+ VK + +++N M+ +Y G K + + IK+ + PD+ TYN
Sbjct: 492 EGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSL 551
Query: 234 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 293
+ A + + +K L ++ S D V Y ++N + L+ L E
Sbjct: 552 MDMYAKSNESWEAEKILKQLK-SSQVKPDVVSYNTVINGFCKQG-LIKEAQRILSEMIAD 609
Query: 294 ITQRQWITYDFLIILYAGL 312
+TY L+ YA L
Sbjct: 610 GMAPCVVTYHTLVGGYASL 628
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/95 (18%), Positives = 52/95 (54%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +L+ +YA + + +AE++ +++K S + + + YN ++ + G +++ ++ E+
Sbjct: 547 TYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEM 606
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
+ P + TY+ + A+ ++ ++ ++ M
Sbjct: 607 IADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYM 641
>gi|302819880|ref|XP_002991609.1| hypothetical protein SELMODRAFT_133813 [Selaginella moellendorffii]
gi|300140642|gb|EFJ07363.1| hypothetical protein SELMODRAFT_133813 [Selaginella moellendorffii]
Length = 356
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 107/234 (45%), Gaps = 9/234 (3%)
Query: 177 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 236
+ LF +K ++ YN ++ + G ++KV V+ E+ R+ + PD+F++N I++
Sbjct: 83 DRLFLEIKSRGVALTLRSYNVVICAFTKEGSIDKVEEVIREMIRQELRPDLFSFNALIAA 142
Query: 237 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT- 295
A + ++ + M +G D V Y L+ ++ +S ++ E+ + E E +
Sbjct: 143 YAMSRKPERGLQVFSNMKA-AGVLPDIVTYTTLIQMFSRSS--MHKEAIEMFE-EMVVNK 198
Query: 296 -QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 354
Q + Y L+ +Y G I+ L++ + Y ++S++L G L+E
Sbjct: 199 CQPDFFVYSLLVSVYGKAGLVADALLIFHRLQLEGHRPNIVTYTSLISAHLHKGLLEESR 258
Query: 355 EIIDQWKQSATSDFDISACNRLLGAFSDVGLT-EKANEFHMLLLQKNCAPTNAS 407
+ Q + D+ N ++ A++ G+ + AN H L Q C P AS
Sbjct: 259 KHFSQMEAYGCRA-DVHLLNTMIDAYAKAGMVNDAANLLHRLTAQGVC-PNRAS 310
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 52/268 (19%), Positives = 112/268 (41%), Gaps = 42/268 (15%)
Query: 21 RPNSDYECFFYSRFLSSGSSQNECLDEETSNSDGKD---------DLKSRIFRISLPKRS 71
RP ++ Y + L+ G +E + + GK+ ++KSR ++L RS
Sbjct: 45 RPKDAWDV--YHQMLAEGIDPDEVTYDILVSGSGKNGYPIDRLFLEIKSR--GVALTLRS 100
Query: 72 ATNVIQRWVSEGNQATVSE-LRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATR 130
VI + EG+ V E +R ++++ + + I+ + ++ K
Sbjct: 101 YNVVICAFTKEGSIDKVEEVIREMIRQELRPDLFSFNALIAAYAMSRKP----------- 149
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNL 188
G + F + + + TYT L+ +++ + ++A E+FE + +
Sbjct: 150 ----------ERGLQVFSNMKAAGVLPDIVTYTTLIQMFSRSSMHKEAIEMFEEMVVNKC 199
Query: 189 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 248
+ +Y+ ++++Y G V L+ ++ + P+I TY IS+ +++ +K
Sbjct: 200 QPDFFVYSLLVSVYGKAGLVADALLIFHRLQLEGHRPNIVTYTSLISAHLHKGLLEESRK 259
Query: 249 FLDEMSCDSGGSDDWVKYVNLVNIYITA 276
+M +D V+L+N I A
Sbjct: 260 HFSQMEAYGCRAD-----VHLLNTMIDA 282
>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
Length = 660
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 129/294 (43%), Gaps = 26/294 (8%)
Query: 74 NVIQRWVSEGN-QATVSELRHILKELRKSQRYKHALEISEWMVTHKE----FVLSDSD-Y 127
N++ R + + N Q TV ++ L K +R ALE+ E M KE FV D+ Y
Sbjct: 172 NLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMY 231
Query: 128 ATRIDLMTKVFGIHSGERYFEGLPL--------SAKTSETYTALLHLYAGAKWTEKAEEL 179
T ID + KV R E L L A T+ T+ L++ Y + E A +L
Sbjct: 232 NTLIDGLCKV------GRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKL 285
Query: 180 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 239
F ++ + + N + N ++ ++ +++K + + TY ++I++
Sbjct: 286 FNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCN 345
Query: 240 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES--STLVEAEKSITQR 297
N+++ +FLDEMS D G D V Y L+ A L +A S S L EA + +
Sbjct: 346 VNNMNKAMEFLDEMSKD-GCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDR- 403
Query: 298 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLK 351
+ Y+ LI + D+ + + + K S Y ++S + +G+ K
Sbjct: 404 --VCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFK 455
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 53/115 (46%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
Y L+ A A + A + ++K++ + + YN +++ + ++++ + E+
Sbjct: 370 VYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEM 429
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
+ V PD TYN IS + N KF+ +M+ + G S Y L++ Y
Sbjct: 430 ELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAY 484
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 4/165 (2%)
Query: 163 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 222
L GA EKA + + + Y++++ L + +V+ L+ EE+K +
Sbjct: 451 LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNH 510
Query: 223 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 282
VVPD+FTY + I S + Q +K+ DEM D G + + V Y L++ Y+ A + +A
Sbjct: 511 VVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRD-GCAPNVVTYTALIHAYLKARKMSSA 569
Query: 283 -ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 326
E ++ +E I +TY LI + G +K QI+ +R
Sbjct: 570 NELFEMMLSEGCIP--NVVTYTALIDGHCKSGQIEKACQIYARMR 612
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 137/356 (38%), Gaps = 34/356 (9%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDS-DYATR 130
A ++I+ +S+G S ++ L + + +A + E M ++ V+ D Y
Sbjct: 464 AYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNH--VVPDVFTYTIL 521
Query: 131 IDLMTKVFGIHSGERYFEGLPL--SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNL 188
ID KV + ++F+ + A TYTAL+H Y A+ A ELFE +
Sbjct: 522 IDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGC 581
Query: 189 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPD----------------IFTYNL 232
N + Y ++ + GQ+EK + ++ +PD IFTY
Sbjct: 582 IPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGA 641
Query: 233 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 292
+ + + + LD MS + G + + Y L++ + L A+ +E+
Sbjct: 642 LVDGLCKAHKVKEARDLLDVMSVE-GCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSER 700
Query: 293 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 352
+ TY LI L ++D K L + + N I M+ L +
Sbjct: 701 GYGPNVY-TYSSLI---DRLFKDKRLDLALKVLSRMLENSCAPNVIIYTE---MIDGLCK 753
Query: 353 VGEIIDQWK-----QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
VG+ + ++ + ++ ++ F G +K E + K CAP
Sbjct: 754 VGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAP 809
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 7/124 (5%)
Query: 130 RIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLS 189
R+DL KV R E A YT ++ T++A L +++
Sbjct: 721 RLDLALKVL-----SRMLENS--CAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCH 773
Query: 190 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 249
N + Y M+ + G+V+K ++ ++ K P+ TY + I+ C A +D +
Sbjct: 774 PNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQL 833
Query: 250 LDEM 253
LDEM
Sbjct: 834 LDEM 837
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 4/165 (2%)
Query: 163 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 222
L GA EKA + + + Y++++ L + +V+ L+ EE+K +
Sbjct: 451 LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNH 510
Query: 223 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 282
VVPD+FTY + I S + Q +K+ DEM D G + + V Y L++ Y+ A + +A
Sbjct: 511 VVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRD-GCAPNVVTYTALIHAYLKARKMSSA 569
Query: 283 -ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 326
E ++ +E I +TY LI + G +K QI+ +R
Sbjct: 570 NELFEMMLSEGCIP--NVVTYTALIDGHCKSGQIEKACQIYARMR 612
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 137/356 (38%), Gaps = 34/356 (9%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDS-DYATR 130
A ++I+ +S+G S ++ L + + +A + E M ++ V+ D Y
Sbjct: 464 AYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNH--VVPDVFTYTIL 521
Query: 131 IDLMTKVFGIHSGERYFEGLPL--SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNL 188
ID KV + ++F+ + A TYTAL+H Y A+ A ELFE +
Sbjct: 522 IDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGC 581
Query: 189 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPD----------------IFTYNL 232
N + Y ++ + GQ+EK + ++ +PD IFTY
Sbjct: 582 IPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGA 641
Query: 233 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 292
+ + + + LD MS + G + + Y L++ + L A+ +E+
Sbjct: 642 LVDGLCKAHKVKEARDLLDVMSVE-GCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSER 700
Query: 293 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 352
+ TY LI L ++D K L + + N I M+ L +
Sbjct: 701 GYGPNVY-TYSSLI---DRLFKDKRLDLALKVLSRMLENSCAPNVIIYTE---MIDGLCK 753
Query: 353 VGEIIDQWK-----QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
VG+ + ++ + ++ ++ F G +K E + K CAP
Sbjct: 754 VGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAP 809
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 7/124 (5%)
Query: 130 RIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLS 189
R+DL KV R E A YT ++ T++A L +++
Sbjct: 721 RLDLALKVL-----SRMLENS--CAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCH 773
Query: 190 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 249
N + Y M+ + G+V+K ++ ++ K P+ TY + I+ C A +D +
Sbjct: 774 PNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQL 833
Query: 250 LDEM 253
LDEM
Sbjct: 834 LDEM 837
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 109/257 (42%), Gaps = 13/257 (5%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+ A ++AE+L ER+K S + + + Y+ + G+V V+E++
Sbjct: 189 TYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQM 248
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + P++ TYN + + ID + +++M+ G + V Y +V+
Sbjct: 249 RDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGR 308
Query: 279 LVNAESSTLVEA-EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR---MTKQKMTS 334
E+ +++EA ++ + +TY L+ GL KI++ +++R M K +
Sbjct: 309 --TQEARSVMEAMARAGCRPDVVTYSSLV---NGLCKAGKIEEAVEAVREMAMEGCKPNA 363
Query: 335 RNYICILSSYLMLGHLKEVGEIIDQWKQSAT----SDFDISACNRLLGAFSDVGLTEKAN 390
Y ++ G L E ++++ +S N L+G G + A
Sbjct: 364 VTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDAL 423
Query: 391 EFHMLLLQKNCAPTNAS 407
+F + + C P S
Sbjct: 424 KFFQRMRSQGCDPDGVS 440
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 98/245 (40%), Gaps = 2/245 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY+ LL Y A E++ EL + V L +ALMY +++ ++ + ++EE+
Sbjct: 84 TYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEM 143
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
R P + T+N IS C N++ L +M+ SG D V Y L++ A
Sbjct: 144 IRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMA-ASGVKADVVTYNTLMDGLCKAGR 202
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L AE L + S + Y + G Q+ + +R + Y
Sbjct: 203 LQEAE-QLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYN 261
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
IL G + E+++Q S ++ + ++ +G T++A + +
Sbjct: 262 TILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMAR 321
Query: 399 KNCAP 403
C P
Sbjct: 322 AGCRP 326
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 78/197 (39%), Gaps = 8/197 (4%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLS 153
IL L KS + ALE+ E M + L+ Y+T +D + K+ E + +
Sbjct: 263 ILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARA 322
Query: 154 AKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 211
+ TY++L++ A E+A E + NA+ Y ++ S G++ +
Sbjct: 323 GCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEA 382
Query: 212 ALVVEEI-----KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 266
+VEE+ + P + TYN I ID KF M G D V Y
Sbjct: 383 ERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMR-SQGCDPDGVSY 441
Query: 267 VNLVNIYITASHLVNAE 283
+V + + AE
Sbjct: 442 STIVEGLARSGRALQAE 458
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 110/263 (41%), Gaps = 20/263 (7%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTH--KEFVLSDSDYAT 129
A +++Q+ + G +A V ++ L K+ R + A ++ E M V++ S +
Sbjct: 171 ADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVY 230
Query: 130 RIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSN 187
+ KV H + E + S TY +L + + A E+ E++ S+
Sbjct: 231 GLCKSGKVLDAH---QVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSD 287
Query: 188 -LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 246
N + Y+ ++ +G+ ++ V+E + R PD+ TY+ ++ I++
Sbjct: 288 GCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEA 347
Query: 247 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVE------AEKSITQRQWI 300
+ + EM+ + G + V Y +LV+ + L AE+ +VE
Sbjct: 348 VEAVREMAME-GCKPNAVTYCSLVHGLCSCGRL--AEAERMVEEMSSGGGGGHHCPPSVS 404
Query: 301 TYDFLIILYAGLGNKDKIDQIWK 323
TY+ LI GL +ID K
Sbjct: 405 TYNALI---GGLCKAGRIDDALK 424
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 144/342 (42%), Gaps = 17/342 (4%)
Query: 70 RSATNVIQRWVSEGNQATVSELRHILKELRK-SQRYKHALEISEWMVTHKEFVLSDS-DY 127
R A V +R V G Q + +L K + +K +E+ M H V D Y
Sbjct: 189 RDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHG--VAPDRYTY 246
Query: 128 ATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQ 185
T I + + F+ + S + T+ +LL +Y A+ ++A E+ + +++
Sbjct: 247 NTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMER 306
Query: 186 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 245
+ + YN +++ Y+ G +E+ + +E++ K + PD+ TY IS ID
Sbjct: 307 VGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDA 366
Query: 246 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV----EAEKSITQRQWIT 301
DEM +G + Y L+ + H V + ++ E + +T
Sbjct: 367 AIVEYDEM-VRNGCKPNLCTYNALIKM-----HGVRGKFPEMMAVFDEFRSAGFVPDIVT 420
Query: 302 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 361
++ L+ ++ G ++ ++K ++ Y+ ++SSY G +I +
Sbjct: 421 WNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMM 480
Query: 362 QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
++ D+S N +L A + G E+A + + +++C P
Sbjct: 481 EAGIYP-DVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKP 521
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 162 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 221
A++ +Y + K E++ +K+S ++ +A YN +M +Y +G EK ++ EIK
Sbjct: 598 AMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSS 657
Query: 222 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
V PD ++YN I + + + + EM C SG D V Y V Y++ S
Sbjct: 658 GVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKC-SGLKPDVVTYNIFVKSYVSNS 712
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 96/230 (41%), Gaps = 8/230 (3%)
Query: 117 HKEFVLSDSDY-ATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEK 175
H E VL AT I +M + + + P + YTAL+ ++ A
Sbjct: 133 HGEGVLHHPRVLATAIRVMARAGRLAEASALLDAAP--GPDAGAYTALVSAFSRAGRFRD 190
Query: 176 AEELFERVKQSNLSFNALMYNEMMTLY--MSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 233
A +F R+ S + + YN ++ +Y M+V E V LV +K V PD +TYN
Sbjct: 191 AVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVA-SMKEHGVAPDRYTYNTL 249
Query: 234 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 293
IS C + + DEM SG D V + +L+++Y A A + E E+
Sbjct: 250 ISCCRRRALYKEAAQVFDEMKA-SGFEPDKVTFNSLLDVYGKARRHDEA-IEVIQEMERV 307
Query: 294 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSS 343
+TY+ LI Y G ++ + + + + K Y ++S
Sbjct: 308 GCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISG 357
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/281 (19%), Positives = 124/281 (44%), Gaps = 38/281 (13%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
+TY +L+ Y+ + A ++++R+ ++ + + YN +++ G+ E+ + E
Sbjct: 454 DTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAE 513
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW-VKYVNLVNIYITA 276
++ ++ PD ++Y+ + + A +D++K D++ + +W VK + LVN +
Sbjct: 514 MEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKV-- 571
Query: 277 SHLVNAESSTL-----------------------------VEAEKSITQRQWI-----TY 302
++L AE + L VE S+ + I TY
Sbjct: 572 NNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATY 631
Query: 303 DFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ 362
+ L+ +Y+ LG+ +K + I ++ + + +Y ++ +Y G +KE + + K
Sbjct: 632 NSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKC 691
Query: 363 SATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
S D+ N + ++ + E+A E ++ + C P
Sbjct: 692 SGLKP-DVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKP 731
>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 4/165 (2%)
Query: 163 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 222
L GA EKA + + + Y++++ L + +V+ L+ EE+K +
Sbjct: 451 LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNH 510
Query: 223 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 282
VVPD+FTY + I S + Q +K+ DEM D G + + V Y L++ Y+ A + +A
Sbjct: 511 VVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRD-GCAPNVVTYTALIHAYLKARKMSSA 569
Query: 283 -ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 326
E ++ +E I +TY LI + G +K QI+ +R
Sbjct: 570 NELFEMMLSEGCIP--NVVTYTALIDGHCKSGQIEKACQIYARMR 612
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 137/356 (38%), Gaps = 34/356 (9%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDS-DYATR 130
A ++I+ +S+G S ++ L + + +A + E M ++ V+ D Y
Sbjct: 464 AYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNH--VVPDVFTYTIL 521
Query: 131 IDLMTKVFGIHSGERYFEGLPL--SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNL 188
ID KV + ++F+ + A TYTAL+H Y A+ A ELFE +
Sbjct: 522 IDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGC 581
Query: 189 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPD----------------IFTYNL 232
N + Y ++ + GQ+EK + ++ +PD IFTY
Sbjct: 582 IPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGA 641
Query: 233 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 292
+ + + + LD MS + G + + Y L++ + L A+ +E+
Sbjct: 642 LVDGLCKAHKVKEARDLLDVMSVE-GCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSER 700
Query: 293 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 352
+ TY LI L ++D K L + + N I M+ L +
Sbjct: 701 GYGPNVY-TYSSLI---DRLFKDKRLDLALKVLSRMLENSCAPNVIIYTE---MIDGLCK 753
Query: 353 VGEIIDQWK-----QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
VG+ + ++ + ++ ++ F G +K E + K CAP
Sbjct: 754 VGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAP 809
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 7/124 (5%)
Query: 130 RIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLS 189
R+DL KV R E A YT ++ T++A L +++
Sbjct: 721 RLDLALKVL-----SRMLENS--CAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCH 773
Query: 190 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 249
N + Y M+ + G+V+K ++ ++ K P+ TY + I+ C A +D +
Sbjct: 774 PNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQL 833
Query: 250 LDEM 253
LDEM
Sbjct: 834 LDEM 837
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 144/342 (42%), Gaps = 17/342 (4%)
Query: 70 RSATNVIQRWVSEGNQATVSELRHILKELRK-SQRYKHALEISEWMVTHKEFVLSDS-DY 127
R A V +R V G Q + +L K + +K +E+ M H V D Y
Sbjct: 171 RDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHG--VAPDRYTY 228
Query: 128 ATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQ 185
T I + + F+ + S + T+ +LL +Y A+ ++A E+ + +++
Sbjct: 229 NTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMER 288
Query: 186 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 245
+ + YN +++ Y+ G +E+ + +E++ K + PD+ TY IS ID
Sbjct: 289 VGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDA 348
Query: 246 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV----EAEKSITQRQWIT 301
DEM +G + Y L+ + H V + ++ E + +T
Sbjct: 349 AIVEYDEM-VRNGCKPNLCTYNALIKM-----HGVRGKFPEMMAVFDEFRSAGFVPDIVT 402
Query: 302 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 361
++ L+ ++ G ++ ++K ++ Y+ ++SSY G +I +
Sbjct: 403 WNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMM 462
Query: 362 QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
++ D+S N +L A + G E+A + + +++C P
Sbjct: 463 EAGIYP-DVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKP 503
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 162 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 221
A++ +Y + K E++ +K+S ++ +A YN +M +Y +G EK ++ EIK
Sbjct: 580 AMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSS 639
Query: 222 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
V PD ++YN I + + + + EM C SG D V Y V Y++ S
Sbjct: 640 GVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKC-SGLKPDVVTYNIFVKSYVSNS 694
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 96/230 (41%), Gaps = 8/230 (3%)
Query: 117 HKEFVLSDSDY-ATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEK 175
H E VL AT I +M + + + P + YTAL+ ++ A
Sbjct: 115 HGEGVLHHPRVLATAIRVMARAGRLAEASALLDAAP--GPDAGAYTALVSAFSRAGRFRD 172
Query: 176 AEELFERVKQSNLSFNALMYNEMMTLY--MSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 233
A +F R+ S + + YN ++ +Y M+V E V LV +K V PD +TYN
Sbjct: 173 AVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVA-SMKEHGVAPDRYTYNTL 231
Query: 234 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 293
IS C + + DEM SG D V + +L+++Y A A + E E+
Sbjct: 232 ISCCRRRALYKEAAQVFDEMKA-SGFEPDKVTFNSLLDVYGKARRHDEA-IEVIQEMERV 289
Query: 294 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSS 343
+TY+ LI Y G ++ + + + + K Y ++S
Sbjct: 290 GCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISG 339
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/281 (19%), Positives = 124/281 (44%), Gaps = 38/281 (13%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
+TY +L+ Y+ + A ++++R+ ++ + + YN +++ G+ E+ + E
Sbjct: 436 DTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAE 495
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW-VKYVNLVNIYITA 276
++ ++ PD ++Y+ + + A +D++K D++ + +W VK + LVN +
Sbjct: 496 MEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKV-- 553
Query: 277 SHLVNAESSTL-----------------------------VEAEKSITQRQWI-----TY 302
++L AE + L VE S+ + I TY
Sbjct: 554 NNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATY 613
Query: 303 DFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ 362
+ L+ +Y+ LG+ +K + I ++ + + +Y ++ +Y G +KE + + K
Sbjct: 614 NSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKC 673
Query: 363 SATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
S D+ N + ++ + E+A E ++ + C P
Sbjct: 674 SGLKP-DVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKP 713
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 64/123 (52%), Gaps = 4/123 (3%)
Query: 149 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 208
G+P +TS TY++L+H + + A +L + +++ LS N + Y ++ Y +GQ+
Sbjct: 612 GIP---QTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQM 668
Query: 209 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268
KV +++E+ NV P+ TY + I+ N+ K L+EM+ G D V Y
Sbjct: 669 HKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMA-QKGIVPDAVTYNA 727
Query: 269 LVN 271
L N
Sbjct: 728 LTN 730
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 102/237 (43%), Gaps = 3/237 (1%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
A + T AL+H A E+A +L + + + L +++ YN ++ G+VE+
Sbjct: 439 AANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFK 498
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
+ EE+ R+ + PD++TYN+ + I++ E +G D Y +++ Y
Sbjct: 499 LKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECK-KNGNFPDAYTYGIMIDGY 557
Query: 274 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
A+ + E E ++ + Y LI Y GN + ++ +R T
Sbjct: 558 CKANRVEEGE-KLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQT 616
Query: 334 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 390
S Y ++ +G + +++D+ ++ S ++ L+G + +G K +
Sbjct: 617 SATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSP-NVVCYTALIGGYCKLGQMHKVD 672
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 93/231 (40%), Gaps = 3/231 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY LLH E+A L+ K++ +A Y M+ Y +VE+ + +E+
Sbjct: 514 TYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEM 573
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + Y I + N+ + + D+M G Y +L++ ++
Sbjct: 574 VTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMR-SRGIPQTSATYSSLIH-GLSNIG 631
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
LV++ + L E K + Y LI Y LG K+D I + + + Y
Sbjct: 632 LVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYT 691
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
+++ + LG++K +++++ Q D N L F G E+A
Sbjct: 692 IMINGHCKLGNMKAAAKLLNEMAQKGIVP-DAVTYNALTNGFCKEGKMEEA 741
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
YTAL+ Y K + + + + +N+ N + Y M+ + +G ++ A ++ E+
Sbjct: 655 YTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMA 714
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
+K +VPD TYN + +++ K D MS G S D + Y L++
Sbjct: 715 QKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMS-TGGISLDDITYTTLID 765
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 76/167 (45%), Gaps = 16/167 (9%)
Query: 120 FVLSDSDYATRIDLMTKVFGI--HSGERYFEGLPLSAKTSETY--TALLHLYAGAKWTEK 175
F+LS A + + +VF I H G T + Y + +++ + +
Sbjct: 167 FLLSSLVKANEVKMSYQVFDIMCHCG-----------VTPDVYLFSTMVNAFCTGGRVDD 215
Query: 176 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
A ELF ++++ ++ N + YN ++ G++++ E+++++ V P + TY + I+
Sbjct: 216 AIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLIN 275
Query: 236 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 282
D+ L EMS D G + + V Y L++ Y ++ A
Sbjct: 276 GLVKLERFDEANCILKEMS-DRGYAPNNVVYNTLIDGYCRIGNISTA 321
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 70/339 (20%), Positives = 142/339 (41%), Gaps = 12/339 (3%)
Query: 57 DLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVT 116
D RI IS + ++I +S N T + L ++ KS + +HA + E M+T
Sbjct: 310 DGYCRIGNISTALQIRDDMISNGISP-NSVTCNSL---IQGYCKSNQMEHAEHLLEEMLT 365
Query: 117 HKEFVLSDSDYATRIDLMTKVFGIHSGERYF-EGLPLSAKTSETYTALL--HLYAGAKWT 173
V++ + + I + S + E L + K ++ LL L K +
Sbjct: 366 GGG-VINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQS 424
Query: 174 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 233
E A EL+ R+ + + N + N ++ G E+ A +++E+ + +V D +YN
Sbjct: 425 E-AIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTL 483
Query: 234 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 293
I +C +++ K +EM G D Y L++ + A E +K+
Sbjct: 484 ILACCKEGKVEEGFKLKEEMV-RRGIQPDMYTYNMLLHGLCNMGKIEEA-GGLWHECKKN 541
Query: 294 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 353
TY +I Y ++ +++++ + K + + Y ++ +Y G+++E
Sbjct: 542 GNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREA 601
Query: 354 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
+ D + + + L+ S++GL + AN+
Sbjct: 602 FRLRDDMRSRGIPQTSATY-SSLIHGLSNIGLVDSANQL 639
>gi|449461223|ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
gi|449507064|ref|XP_004162923.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
Length = 844
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 139/292 (47%), Gaps = 15/292 (5%)
Query: 81 SEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATR-IDLMTKVFG 139
SE + + L L L KS+R A+ + EW+V++ V D ++ ++LM ++ G
Sbjct: 154 SELLEVDIVSLLKALDVLGKSER---AILLFEWVVSNS--VSGDVKLDSKAVELMIRILG 208
Query: 140 IHS----GERYFEGLPLSAKTSETY--TALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 193
S + + +P+ + + T +LH Y+ ++A +FER+K LS + +
Sbjct: 209 RESKYSIALKLLDKIPIDKYSLDVRACTTILHAYSRNGKYKQAIAMFERMKDCGLSPSLV 268
Query: 194 MYNEMMTLYMSVGQV-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 252
YN M+ +Y +G+ +K+ +++E++ + + D FT + IS+C I++ K+F E
Sbjct: 269 TYNVMLDVYGKMGRSWDKILDLLDEMRNEGLQFDEFTCSTVISACGREGLINEAKEFFVE 328
Query: 253 MSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL 312
+ SG V Y L+ ++ A + + + L E E + +TY+ L+ Y
Sbjct: 329 LK-SSGYEPGTVTYNALLQVFGKAG-IYSEALNILKEMEDNNCTLDSVTYNELVAAYVRA 386
Query: 313 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
G ++ + ++ + Y ++++Y G + ++ +Q K+S
Sbjct: 387 GFYEEGATVIDTMTRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSG 438
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 57/102 (55%), Gaps = 7/102 (6%)
Query: 159 TYTALLHLYA--GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
TY +L+++YA G W KAEE+ + + +S S + + YN ++ + G +++ V+
Sbjct: 690 TYNSLMNMYARRGECW--KAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMS 747
Query: 217 EIKRKNVVPDIFTYNLWISSCAAT---LNIDQVKKFLDEMSC 255
E+ + + P IFTYN ++S A +D+V ++ + +C
Sbjct: 748 EMTTRGICPCIFTYNTFVSGYAGRGMFAEVDEVISYMIQKNC 789
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 58/121 (47%), Gaps = 2/121 (1%)
Query: 136 KVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 193
K + ER FE L + + + ++L ++A E+A+++ + +++S L + +
Sbjct: 630 KCRAVRGMERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLV 689
Query: 194 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
YN +M +Y G+ K +++ + + PD+ +YN I + + + + EM
Sbjct: 690 TYNSLMNMYARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEM 749
Query: 254 S 254
+
Sbjct: 750 T 750
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 48/251 (19%), Positives = 104/251 (41%), Gaps = 11/251 (4%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
+ TY ALL+ A + AE + ++ N ++ M+ Y G V + + +
Sbjct: 548 ATTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGLERIGK 607
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
+I + P I + + +++ +E+ +G D V + ++++I+
Sbjct: 608 DIYDGQIFPSWVLLRTLILANFKCRAVRGMERAFEELM-KNGYKPDMVIFNSMLSIF-AK 665
Query: 277 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 336
+++ L +S Q +TY+ L+ +YA G K ++I K L + + +
Sbjct: 666 NNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGESPDLVS 725
Query: 337 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC----NRLLGAFSDVGLTEKANEF 392
Y I+ + G ++E ++ + I C N + ++ G+ + +E
Sbjct: 726 YNTIIKGFCRQGLMQEAIRVMSEMTTRG-----ICPCIFTYNTFVSGYAGRGMFAEVDEV 780
Query: 393 HMLLLQKNCAP 403
++QKNC P
Sbjct: 781 ISYMIQKNCKP 791
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 69/156 (44%), Gaps = 15/156 (9%)
Query: 83 GNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHS 142
G SE +ILKE+ + ++ +E + + + AT ID MT+
Sbjct: 349 GKAGIYSEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEG-ATVIDTMTR------ 401
Query: 143 GERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY 202
+G+ + TYT +++ Y A KA +LF ++K+S N YN ++ L
Sbjct: 402 -----KGV---MPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALL 453
Query: 203 MSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCA 238
+ E++ ++ +++ P+ T+N ++ C
Sbjct: 454 GKKSRSEEMIKILSDMRINGCPPNRITWNTLLAMCG 489
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 46/97 (47%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
S TY L+ Y A + E+ + + + + + NA+ Y ++ Y G+ K +
Sbjct: 373 SVTYNELVAAYVRAGFYEEGATVIDTMTRKGVMPNAVTYTTVINAYGRAGKEVKALQLFN 432
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
++K+ VP++ TYN ++ +++ K L +M
Sbjct: 433 QMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDM 469
>gi|297724361|ref|NP_001174544.1| Os05g0583900 [Oryza sativa Japonica Group]
gi|42491383|gb|AAS16889.1| hypothetical protein [Oryza sativa Japonica Group]
gi|255676609|dbj|BAH93272.1| Os05g0583900 [Oryza sativa Japonica Group]
Length = 467
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 114/268 (42%), Gaps = 5/268 (1%)
Query: 140 IHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 197
+ R F+ +PL A TYTAL+H Y EK LFE +++ + N YN
Sbjct: 54 VAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNC 113
Query: 198 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 257
++ + G+ E+ + +E+ + +V ++ +YN I+ + K LD M +
Sbjct: 114 LIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTE- 172
Query: 258 GGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 317
G + + LV+ Y A + NA + + + Q +TY+ LI + + +
Sbjct: 173 GTRPSIITFNLLVDGYGKAGKMSNA-LPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTR 231
Query: 318 IDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLL 377
++ ++ + T Y ++ S+ H+ + EI+ +++ + D L+
Sbjct: 232 ANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGL-EVDAHTYGVLV 290
Query: 378 GAFSDVGLTEKANEFHMLLLQKNCAPTN 405
A G + A + + +K P+N
Sbjct: 291 RALCMEGNMKDARKLFQSMGEKGVEPSN 318
>gi|115444491|ref|NP_001046025.1| Os02g0170000 [Oryza sativa Japonica Group]
gi|49388067|dbj|BAD25179.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535556|dbj|BAF07939.1| Os02g0170000 [Oryza sativa Japonica Group]
Length = 397
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 103/236 (43%), Gaps = 6/236 (2%)
Query: 149 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 208
G+P +A Y A L A+ TEKA E+++R+K+ N + M+ +Y Q
Sbjct: 42 GIPPNATV---YNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQP 98
Query: 209 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268
V E+K P+I TY +++ A ++ ++ +EM +G D Y
Sbjct: 99 MSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQ-QAGHEPDVYAYNA 157
Query: 269 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 328
L+ Y A L S + + +Y+ L+ Y G + + +++ L+
Sbjct: 158 LMEAYSRAG-LPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQR 216
Query: 329 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 384
T ++++ +L+++ G+ E++ Q +S + D A N +L A++ G
Sbjct: 217 GMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTP-DTFALNAMLNAYARAG 271
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 97/233 (41%), Gaps = 14/233 (6%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
+ET+T ++++Y AK + ++F +K N Y ++ + G EK V E
Sbjct: 82 TETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFE 141
Query: 217 EIKRKNVVPDIFTYNLWI---SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
E+++ PD++ YN + S ++ + M C+ D Y LV+ Y
Sbjct: 142 EMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEP----DRASYNILVDAY 197
Query: 274 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
A +AE + E ++ ++ L+ +A GN + +++ L K +T
Sbjct: 198 GRAGLHEDAE-AVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLH--KSGLT 254
Query: 334 SRNYI--CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 384
+ +L++Y G L ++ + ++ D D+ N + A+ G
Sbjct: 255 PDTFALNAMLNAYARAGRLDDMERLFAAMERR--GDADVGTYNVAVNAYGRAG 305
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Query: 301 TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW 360
T+ +I +Y +++ ++ K Y +++++ G ++ E+ ++
Sbjct: 84 TFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEM 143
Query: 361 KQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
+Q A + D+ A N L+ A+S GL + A+E L+ C P AS
Sbjct: 144 QQ-AGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRAS 189
>gi|15228936|ref|NP_188942.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273922|sp|Q9LS88.1|PP250_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g23020
gi|9294191|dbj|BAB02093.1| unnamed protein product [Arabidopsis thaliana]
gi|332643185|gb|AEE76706.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 842
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 131/284 (46%), Gaps = 11/284 (3%)
Query: 132 DLMTKVFGI-HSGER---YFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQ 185
++M K +GI S E+ FE + T + TY L+ + A A K E++++
Sbjct: 509 NVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRE 568
Query: 186 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 245
+ + + Y +++ ++ +GQ+ V +E+ N+ PD+ Y + I++ A T N+ Q
Sbjct: 569 TGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQ 628
Query: 246 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES--STLVEAEKSITQRQWITYD 303
+++ M ++G + V Y +L+ +Y +L AE+ L+++ T +
Sbjct: 629 AMSYVEAMK-EAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSN 687
Query: 304 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 363
+I LY+ K + I+ S++ + + + +L Y G +E +I Q ++
Sbjct: 688 CMINLYSERSMVRKAEAIFDSMKQ-RGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREM 746
Query: 364 ATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
+S N +LG F+ G ++A E ++ P +++
Sbjct: 747 KILTDPLSY-NSVLGLFALDGRFKEAVETFKEMVSSGIQPDDST 789
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 89/199 (44%), Gaps = 8/199 (4%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
+S TY ++ Y + ++A E F+R+ + + + +N M+ +Y + GQ+ +V ++
Sbjct: 297 SSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLM 356
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275
+ +K + PD TYN+ IS +I++ + EM D G D V Y L+ + +
Sbjct: 357 KTMKL-HCAPDTRTYNILISLHTKNNDIERAGAYFKEMK-DDGLKPDPVSYRTLLYAF-S 413
Query: 276 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM--TKQKMT 333
H+V + E + + T L +Y + +++ W + M+
Sbjct: 414 IRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYV---EAEMLEKSWSWFKRFHVAGNMS 470
Query: 334 SRNYICILSSYLMLGHLKE 352
S Y + +Y G+L E
Sbjct: 471 SEGYSANIDAYGERGYLSE 489
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 76/168 (45%), Gaps = 9/168 (5%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKV-FGIHSGERYFEGLPL 152
+L+ L K+ ++++ + + M+ K +S Y T ID+ +K +H+ + +
Sbjct: 193 MLRILGKACKWRYVQSLWDEMI-RKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKI 251
Query: 153 SAKTSETYTAL-LHLYAGAKWTEKAEELF------ERVKQSNLSFNALMYNEMMTLYMSV 205
+ E T + L +Y A+ +KAEE F E S++ ++ YN M+ Y
Sbjct: 252 GMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKS 311
Query: 206 GQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
GQ+++ + + + + +VP T+N I + +V + M
Sbjct: 312 GQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM 359
>gi|414888267|tpg|DAA64281.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 873
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 122/299 (40%), Gaps = 44/299 (14%)
Query: 147 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 206
F LP ++T+ +YT+L+ YA E+A L +++K + ++ A YN ++
Sbjct: 164 FHDLPAESRTALSYTSLIAAYARNALHEEARALLDQMKATGVAPTAATYNTVLAACARAT 223
Query: 207 ----QVEKVALVVEEIKR---KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG 259
+ + + E++ +V PD+ TYN +++ A DQ + L M ++G
Sbjct: 224 DPPVPFDMLLGLFAEMRHDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTM-LEAGV 282
Query: 260 SDDWVKYVNLVNIYITASHLVNA-----------------------ESSTLV--EAEKSI 294
S D V Y ++V+ + +A +L A E+ T V A+
Sbjct: 283 SPDTVSYRHIVDAFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHTRVGATADAVA 342
Query: 295 TQRQW---------ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYL 345
RQ TY L+ LY G D + Q+++ +R T+ Y + +
Sbjct: 343 VLRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRQLFREMRTAVPPDTA-TYNVLFRVFG 401
Query: 346 MLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 404
G KEV E+ ++ D+ C ++ A GL A E + ++ PT
Sbjct: 402 DGGFFKEVVELFHDMLKTGVQP-DMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPT 459
>gi|255557937|ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540761|gb|EEF42321.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1429
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 104/227 (45%), Gaps = 13/227 (5%)
Query: 102 QRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAK-----T 156
+ ++ ALE+ EW+ + S A + + V G + E + + A+ T
Sbjct: 154 ENWQRALEVFEWLNLRHWY----SPNARMLATILAVLGKANQEALAVEIFIRAESTVDNT 209
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-EKVAL-V 214
+ Y A++ +YA K + + + +++ + + +N ++ + G + VA+ +
Sbjct: 210 VQVYNAMMGVYARTGRFNKVQGMLDLMRERGCEPDLVSFNTLINARLKAGAMTPNVAIEL 269
Query: 215 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274
+ E++R + PDI TYN IS+C+ N+++ K D+M D W Y ++++Y
Sbjct: 270 LNEVRRSGLRPDIITYNTLISACSRESNLEEAVKVFDDMEAHYCQPDLWT-YNAMISVYG 328
Query: 275 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQI 321
AE E E +TY+ L+ +A GN DK+ +I
Sbjct: 329 RCGFSGKAE-QLFKELESKGYFPDAVTYNSLLYAFAREGNVDKVKEI 374
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 84/187 (44%), Gaps = 2/187 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY A++ +Y ++ KAE+LF+ ++ +A+ YN ++ + G V+KV + E+
Sbjct: 319 TYNAMISVYGRCGFSGKAEQLFKELESKGYFPDAVTYNSLLYAFAREGNVDKVKEICNEM 378
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + D TYN I + +M SG + D + Y L++ A+
Sbjct: 379 VQMGFIRDEMTYNTIIHMYGKQGQHGLALQLYRDMKL-SGRTPDAITYTVLIDSLGKANK 437
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+V A ++ + E + TY LI YA G + + ++ + +R + + Y
Sbjct: 438 MVEA-ANVMSEMLNIGVKPTLRTYSALICGYARAGQRLEAEETFDCMRRSGIRPDQLAYS 496
Query: 339 CILSSYL 345
+L +L
Sbjct: 497 VMLDVFL 503
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 51/98 (52%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
T TY+AL+ YA A +AEE F+ +++S + + L Y+ M+ +++ + K ++
Sbjct: 456 TLRTYSALICGYARAGQRLEAEETFDCMRRSGIRPDQLAYSVMLDVFLRFDEATKAMMLY 515
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
E+ R + PD Y + + ++ +++ + +M
Sbjct: 516 REMVRDGITPDPTVYGAMLRNLGRENKVEDIQRIIRDM 553
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 89/210 (42%), Gaps = 10/210 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+ + E+A ++F+ ++ + YN M+++Y G K + +E+
Sbjct: 284 TYNTLISACSRESNLEEAVKVFDDMEAHYCQPDLWTYNAMISVYGRCGFSGKAEQLFKEL 343
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ K PD TYN + + A N+D+VK+ +EM G D + Y ++++Y
Sbjct: 344 ESKGYFPDAVTYNSLLYAFAREGNVDKVKEICNEM-VQMGFIRDEMTYNTIIHMYGKQGQ 402
Query: 279 LVNAESSTLVEAEK-SITQRQWITYDFLIILYAGLGNKDKIDQ---IWKSLRMTKQKMTS 334
+ + L K S ITY LI LG +K+ + + + K T
Sbjct: 403 --HGLALQLYRDMKLSGRTPDAITYTVLI---DSLGKANKMVEAANVMSEMLNIGVKPTL 457
Query: 335 RNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
R Y ++ Y G E E D ++S
Sbjct: 458 RTYSALICGYARAGQRLEAEETFDCMRRSG 487
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 58/302 (19%), Positives = 120/302 (39%), Gaps = 14/302 (4%)
Query: 70 RSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYAT 129
R+ N + R +G TV + +L+ L R + +++ + F +S S
Sbjct: 790 RAVFNTMMR---DGPSPTVDSINGLLQALIVDGRLEELYVVTQE-IQDMGFQISKSSILL 845
Query: 130 RIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQSN 187
+D +V I ++ ++G+ + T Y ++ L K E + ++++
Sbjct: 846 ILDAFARVSNIAEAKKIYQGMKAAGYFPTMHLYRIMIGLLCKGKRVRDVEAMVTEMEEAG 905
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 247
+ ++N M+ LY + K + + IK + PD TYN I ++
Sbjct: 906 FRPDLSIWNSMLRLYTGIDDFRKTVQIYQRIKEDGLQPDEDTYNTLIVMYCRDHRPEEGC 965
Query: 248 KFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVE---AEKSITQRQWITYDF 304
+ EM G Y +L+ + +V+AE L E ++ S R + Y
Sbjct: 966 SLMHEMR-RIGLEPKLDTYKSLIAAFGKQQLVVDAEE--LFEELLSKGSKLDRSF--YHI 1020
Query: 305 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
++ +Y GN K +++ ++ + T ++ SY G +E +++ K+
Sbjct: 1021 MMKIYRNSGNHSKAEKLLSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLTNLKEMG 1080
Query: 365 TS 366
S
Sbjct: 1081 LS 1082
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 35/186 (18%), Positives = 84/186 (45%), Gaps = 2/186 (1%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
+ ++L LY G K ++++R+K+ L + YN ++ +Y + E+ ++ E++
Sbjct: 913 WNSMLRLYTGIDDFRKTVQIYQRIKEDGLQPDEDTYNTLIVMYCRDHRPEEGCSLMHEMR 972
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
R + P + TY I++ + ++ +E+ G D Y ++ IY + +
Sbjct: 973 RIGLEPKLDTYKSLIAAFGKQQLVVDAEELFEEL-LSKGSKLDRSFYHIMMKIYRNSGNH 1031
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 339
AE L + + + T L++ Y G + +++ +L+ +++ Y
Sbjct: 1032 SKAE-KLLSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLTNLKEMGLSLSTLPYSS 1090
Query: 340 ILSSYL 345
++ +YL
Sbjct: 1091 VIDAYL 1096
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
+TY +L+ + + AEELFE + + Y+ MM +Y + G K ++
Sbjct: 981 DTYKSLIAAFGKQQLVVDAEELFEELLSKGSKLDRSFYHIMMKIYRNSGNHSKAEKLLSM 1040
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274
+K V P I T +L + S ++ + +K L + + G S + Y ++++ Y+
Sbjct: 1041 MKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLTNLK-EMGLSLSTLPYSSVIDAYL 1096
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 113/263 (42%), Gaps = 5/263 (1%)
Query: 143 GERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMT 200
G R+FE + + TY ++ Y K ++A +L + L N L YN ++
Sbjct: 222 GLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVIN 281
Query: 201 LYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGS 260
VG++E+ + V+ E+ RK PD TYN ++ N Q EM +G
Sbjct: 282 GLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEM-LRNGLP 340
Query: 261 DDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQ 320
D V Y +L+N A +L N + + +TY LI ++ G D+ +
Sbjct: 341 PDVVTYTSLINTMCKAGNL-NRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYR 399
Query: 321 IWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAF 380
IW + + T Y +L+ + + G ++E ++ + S D+ + + ++ F
Sbjct: 400 IWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSP-DVVSYSTIIAGF 458
Query: 381 SDVGLTEKANEFHMLLLQKNCAP 403
++A + + +++K +P
Sbjct: 459 CRYQELDRAFQMNAEMVEKGVSP 481
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 87/214 (40%), Gaps = 3/214 (1%)
Query: 176 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
AE+++ + S +S N YN ++ + + G +E EE++R +P++ TYN I
Sbjct: 187 AEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIG 246
Query: 236 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 295
+ ID+ K L M + G + + Y ++N + S L E ++
Sbjct: 247 AYCKLKRIDEAFKLLRSMGLE-GLEPNLLTYNMVINGLCRVGR-IEETSGVLAEMDRKGF 304
Query: 296 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 355
+TY+ L+ Y +GN + + + Y ++++ G+L E
Sbjct: 305 APDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAME 364
Query: 356 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
DQ ++ L+ FS G ++A
Sbjct: 365 FFDQMHVRGLRPNGVTY-TSLINGFSQKGFMDEA 397
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 97/233 (41%), Gaps = 7/233 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y L+ + A E FE ++++ N + YN ++ Y + ++++ ++ +
Sbjct: 205 SYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSM 264
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + P++ TYN+ I+ I++ L EM G + D V Y LVN Y
Sbjct: 265 GLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMD-RKGFAPDGVTYNTLVNGYCKVG- 322
Query: 279 LVNAESSTLVEAE--KSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 336
N + ++ +E ++ +TY LI GN ++ + + + + +
Sbjct: 323 --NFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVT 380
Query: 337 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
Y +++ + G + E I D+ +S I N LL G E+A
Sbjct: 381 YTSLINGFSQKGFMDEAYRIWDEMIRSGFPP-TIVTYNALLNGHCVSGRMEEA 432
>gi|222632709|gb|EEE64841.1| hypothetical protein OsJ_19698 [Oryza sativa Japonica Group]
Length = 496
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 114/268 (42%), Gaps = 5/268 (1%)
Query: 140 IHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 197
+ R F+ +PL A TYTAL+H Y EK LFE +++ + N YN
Sbjct: 54 VAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNC 113
Query: 198 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 257
++ + G+ E+ + +E+ + +V ++ +YN I+ + K LD M +
Sbjct: 114 LIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTE- 172
Query: 258 GGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 317
G + + LV+ Y A + NA + + + Q +TY+ LI + + +
Sbjct: 173 GTRPSIITFNLLVDGYGKAGKMSNA-LPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTR 231
Query: 318 IDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLL 377
++ ++ + T Y ++ S+ H+ + EI+ +++ + D L+
Sbjct: 232 ANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGL-EVDAHTYGVLV 290
Query: 378 GAFSDVGLTEKANEFHMLLLQKNCAPTN 405
A G + A + + +K P+N
Sbjct: 291 RALCMEGNMKDARKLFQSMGEKGVEPSN 318
>gi|225443015|ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Vitis vinifera]
Length = 624
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 83/191 (43%), Gaps = 9/191 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
Y +LL ++A +LF + + L+ +A Y+ + Y V + V++ +
Sbjct: 256 AYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRM 315
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+R N+VP++FTYN + + +D+ + LDEM + G S D Y N + +
Sbjct: 316 RRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEM-IERGVSPDLWSY-NAIQAFHCDHC 373
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
VN + EK TY+ ++ + +G D++ +W M R +
Sbjct: 374 EVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGG-------MEERGFY 426
Query: 339 CILSSYLMLGH 349
S+Y ++ H
Sbjct: 427 PAASTYAVMVH 437
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 163 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 222
LL++ K ++A+E F++V + NA Y+ +M + VG + + EE++ +
Sbjct: 191 LLYVLCKRKHVKQAQEFFDKVNVEVMP-NAKTYSILMRGWGDVGDSSEARKLFEEMRERG 249
Query: 223 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 282
D+ YN + + N+D+ K EM +G + D Y + Y + + +A
Sbjct: 250 CAVDVVAYNSLLEALCKGGNVDEAYKLFREMG-SNGLAPDACSYSIFIRAYCEVNDIHSA 308
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 8/203 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +L++ Y A ++A LF +K++ L+ + L YN ++ Y +G +E+ +E+
Sbjct: 374 TYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEM 433
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ PD+ TY + ++ N+ V++F DEM G D Y N I+A
Sbjct: 434 VEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEM-LSKGLQPDCFAY----NTRISAEL 488
Query: 279 LVNAESSTLVEAEKSITQ---RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
++ + S E I++ +TY+ + GN +W + +
Sbjct: 489 ILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCI 548
Query: 336 NYICILSSYLMLGHLKEVGEIID 358
Y C++ ++ G L+E +I D
Sbjct: 549 TYTCLIHAHCERGRLREARDIFD 571
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 121/277 (43%), Gaps = 29/277 (10%)
Query: 82 EGNQATVSELRHILKELRKSQRYKHA---------LEISEWMVTHKEFVLSDSDY-ATRI 131
G + E +L+ LR R+ L I +VT+ L DS + R+
Sbjct: 190 HGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYN--TLLDSFFREGRV 247
Query: 132 DLMTKVFGIHSGERYFEGLPLSAKTSE-TYTALLHLYAGAKWTEKAEELFERVKQSNLSF 190
D K+ R E P S+ TY +++ A EKA +L +R++ S +
Sbjct: 248 DQAAKLL------REMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKA- 300
Query: 191 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 250
+A +N ++T Y + G VEK + E++ + +VP + TYN I + N++ +
Sbjct: 301 SAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKF 360
Query: 251 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYA 310
EM G D + Y +L+N Y A +L A + +++ +TY+ L+ Y
Sbjct: 361 VEMRA-MGLLPDLITYNSLINGYCKAGNLKEA-LWLFGDLKRAGLAPSVLTYNILLDGYC 418
Query: 311 GLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 347
LG+ ++ R KQ+M + +S+Y +L
Sbjct: 419 RLGDLEEA-------RRFKQEMVEQGCQPDVSTYTIL 448
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
T TY ++H + E A F ++ L + + YN ++ Y G +++ +
Sbjct: 335 PTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWL 394
Query: 215 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
++KR + P + TYN+ + ++++ ++F EM + G D Y L+N
Sbjct: 395 FGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEM-VEQGCQPDVSTYTILMN 450
>gi|224135699|ref|XP_002322139.1| predicted protein [Populus trichocarpa]
gi|222869135|gb|EEF06266.1| predicted protein [Populus trichocarpa]
Length = 866
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 149/342 (43%), Gaps = 10/342 (2%)
Query: 66 SLPKRSATNVIQRWVSE-GNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSD 124
SLP R + I R + N+ ++++ + KE + ++ +L + + M ++
Sbjct: 87 SLPPRGS---IARCLDVFKNKLSLNDFALVFKEFAQRGDWQRSLRLFKHMQRQIWCKPNE 143
Query: 125 SDYATRIDLMTKVFGIHSGERYFE--GLPLSAKTSETYTALLHLYAGAKWTEKAEELFER 182
Y I L+ + + FE G +++ +YTAL++ Y E + EL ER
Sbjct: 144 HIYTIMISLLGREGLLEKCSDIFEEMGAHGVSRSVFSYTALINSYGRNGKYEVSLELLER 203
Query: 183 VKQSNLSFNALMYNEMMTLYMSVG-QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL 241
+K+ +S + L YN ++ G E + + E++ + + PDI TYN + +C+
Sbjct: 204 MKKERVSPSILTYNTVINSCARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLCACSNRG 263
Query: 242 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWIT 301
D+ + M+ + G D Y LV+ + + L + S L E + + +
Sbjct: 264 LGDEAEMVFRTMN-EGGVVPDITTYTYLVDTFGKLNRL-DKVSELLKEMASTGNVPEISS 321
Query: 302 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 361
Y+ L+ YA +GN + +++ ++ + Y +L Y G EV E+ + K
Sbjct: 322 YNVLLEAYARIGNIEDATGVFRLMQEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMK 381
Query: 362 QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
S T D + N L+ F + G ++ + ++N P
Sbjct: 382 VSNTEP-DAATYNTLIDVFGEGGYFKEVVTLFHDMAEENVEP 422
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 4/158 (2%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
+ETY+ LL LY ++ ELF +K SN +A YN ++ ++ G ++V +
Sbjct: 354 AETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGEGGYFKEVVTLFH 413
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
++ +NV P++ TY I +C D KK L MS + G Y ++ Y A
Sbjct: 414 DMAEENVEPNMETYEGLIFACGKGGLHDDAKKILLHMS-EKGMIPSSKAYTGVIEAYGQA 472
Query: 277 SHLVNAESSTLVEAEKSITQRQWI-TYDFLIILYAGLG 313
+ + E+ + + + I TY+ LI ++A G
Sbjct: 473 A--MYEEALVTLNTMNEMGSKPTIETYNTLIYMFARGG 508
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 81/190 (42%), Gaps = 10/190 (5%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT L+ + +K EL + + + YN ++ Y +G +E V +
Sbjct: 286 TYTYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLM 345
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ VP+ TY++ + D+V++ EM S D Y L++++ +
Sbjct: 346 QEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKV-SNTEPDAATYNTLIDVFGEGGY 404
Query: 279 LVNAESSTLVE--AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM--TS 334
E TL AE+++ + TY+ LI G D +I L M+++ M +S
Sbjct: 405 F--KEVVTLFHDMAEENV-EPNMETYEGLIFACGKGGLHDDAKKIL--LHMSEKGMIPSS 459
Query: 335 RNYICILSSY 344
+ Y ++ +Y
Sbjct: 460 KAYTGVIEAY 469
>gi|414888268|tpg|DAA64282.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 868
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 122/299 (40%), Gaps = 44/299 (14%)
Query: 147 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 206
F LP ++T+ +YT+L+ YA E+A L +++K + ++ A YN ++
Sbjct: 164 FHDLPAESRTALSYTSLIAAYARNALHEEARALLDQMKATGVAPTAATYNTVLAACARAT 223
Query: 207 ----QVEKVALVVEEIKR---KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG 259
+ + + E++ +V PD+ TYN +++ A DQ + L M ++G
Sbjct: 224 DPPVPFDMLLGLFAEMRHDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTM-LEAGV 282
Query: 260 SDDWVKYVNLVNIYITASHLVNA-----------------------ESSTLV--EAEKSI 294
S D V Y ++V+ + +A +L A E+ T V A+
Sbjct: 283 SPDTVSYRHIVDAFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHTRVGATADAVA 342
Query: 295 TQRQW---------ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYL 345
RQ TY L+ LY G D + Q+++ +R T+ Y + +
Sbjct: 343 VLRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRQLFREMRTAVPPDTA-TYNVLFRVFG 401
Query: 346 MLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 404
G KEV E+ ++ D+ C ++ A GL A E + ++ PT
Sbjct: 402 DGGFFKEVVELFHDMLKTGVQP-DMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPT 459
>gi|414888270|tpg|DAA64284.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 890
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 122/299 (40%), Gaps = 44/299 (14%)
Query: 147 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 206
F LP ++T+ +YT+L+ YA E+A L +++K + ++ A YN ++
Sbjct: 186 FHDLPAESRTALSYTSLIAAYARNALHEEARALLDQMKATGVAPTAATYNTVLAACARAT 245
Query: 207 ----QVEKVALVVEEIKR---KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG 259
+ + + E++ +V PD+ TYN +++ A DQ + L M ++G
Sbjct: 246 DPPVPFDMLLGLFAEMRHDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTM-LEAGV 304
Query: 260 SDDWVKYVNLVNIYITASHLVNA-----------------------ESSTLV--EAEKSI 294
S D V Y ++V+ + +A +L A E+ T V A+
Sbjct: 305 SPDTVSYRHIVDAFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHTRVGATADAVA 364
Query: 295 TQRQW---------ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYL 345
RQ TY L+ LY G D + Q+++ +R T+ Y + +
Sbjct: 365 VLRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRQLFREMRTAVPPDTA-TYNVLFRVFG 423
Query: 346 MLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 404
G KEV E+ ++ D+ C ++ A GL A E + ++ PT
Sbjct: 424 DGGFFKEVVELFHDMLKTGVQP-DMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPT 481
>gi|357502623|ref|XP_003621600.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496615|gb|AES77818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 890
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/341 (20%), Positives = 139/341 (40%), Gaps = 19/341 (5%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEI----SEW-----MVTHKEFVL 122
A + +R EG +TV ++ ++ R+ A+++ S W ++T+ +
Sbjct: 232 ALGLFERARLEGYGSTVHSFSAMISAFGRNGRFPDAVDLFRSMSSWGVVPNVITYNSIID 291
Query: 123 SDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFER 182
+ + D++ K + E GL TY +LL + A E A++L
Sbjct: 292 AGAKGEVSFDVVVKFYD----EMIANGL---MPDRLTYNSLLSVCASKGMWEMAQKLLSE 344
Query: 183 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 242
+ + + YN + GQ++ V EE+ K V P++ TY+ + A
Sbjct: 345 MDHRCIVPDVFTYNTYLDTLCKAGQIDLARRVFEEMSSKRVWPNVVTYSAMMDGYAKANL 404
Query: 243 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 302
++ +EM S D V Y LV IY +L A E E+S R +TY
Sbjct: 405 LEDALNLYEEMKLRSVCLDR-VSYNTLVGIYEKLGNLDEAIEKC-KEMERSGINRDVVTY 462
Query: 303 DFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ 362
+ L+ Y G D++ ++++ ++ + Y ++ Y +E ++ ++K
Sbjct: 463 NALLSGYGKHGMYDEVRRLFEEMKARNIYPNTLTYSTMIDMYTKGEMFQEAMDVYREFKM 522
Query: 363 SATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
A + D+ + ++ GL E + M +++K P
Sbjct: 523 -ARLEIDVVFYSAIIDTLCKNGLMESSIMLLMAMMEKGIKP 562
>gi|218197339|gb|EEC79766.1| hypothetical protein OsI_21159 [Oryza sativa Indica Group]
Length = 410
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 114/268 (42%), Gaps = 5/268 (1%)
Query: 140 IHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 197
+ R F+ +PL A TYTAL+H Y EK LFE +++ + N YN
Sbjct: 54 VAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNC 113
Query: 198 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 257
++ + G+ E+ + +E+ + +V ++ +YN I+ + K LD M +
Sbjct: 114 LIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTE- 172
Query: 258 GGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 317
G + + LV+ Y A + NA + + + Q +TY+ LI + + +
Sbjct: 173 GTRPSIITFNLLVDGYGKAGKMSNA-LPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTR 231
Query: 318 IDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLL 377
++ ++ + T Y ++ S+ H+ + EI+ +++ + D L+
Sbjct: 232 ANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGL-EVDAHTYGVLV 290
Query: 378 GAFSDVGLTEKANEFHMLLLQKNCAPTN 405
A G + A + + +K P+N
Sbjct: 291 RALCMEGNMKDARKLFQSMGEKGVEPSN 318
>gi|357125122|ref|XP_003564244.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Brachypodium distachyon]
Length = 502
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 105/247 (42%), Gaps = 8/247 (3%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y L+ + K KA ELF+ + + N Y +++ Y G ++ +++ +K
Sbjct: 154 YIKLITMLGKCKQPGKAHELFQAMVDEGCAPNLESYTALVSAYSRSGSFDRAFSLLDRMK 213
Query: 220 -RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
PD+ TY++ I SC + D+VK L +M+C G + V Y LV+ Y A
Sbjct: 214 ATPGCRPDVQTYSILIKSCLHAYDFDKVKDLLADMAC-GGIRPNTVTYNTLVDAYGKAGR 272
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
ES+ L + W T + + + G + ++ ++ + + + Y
Sbjct: 273 FAEMESTLLEMLSEKCKPDVW-TMNSTLRAFGSSGQIEMMESCYEKFQASGISPNIKTYN 331
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL-- 396
+L SY +++G ++ ++ Q + I N ++ AF G E+ L+
Sbjct: 332 ILLDSYGKAKMYEKMGAVM-EYMQKYYYSWTIVTYNVVIDAFGRAGDLEQMEYIFRLMKS 390
Query: 397 --LQKNC 401
++ NC
Sbjct: 391 DRIKPNC 397
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 47/250 (18%), Positives = 113/250 (45%), Gaps = 4/250 (1%)
Query: 151 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 210
P +TY+ L+ A +K ++L + + N + YN ++ Y G+ +
Sbjct: 216 PGCRPDVQTYSILIKSCLHAYDFDKVKDLLADMACGGIRPNTVTYNTLVDAYGKAGRFAE 275
Query: 211 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 270
+ + E+ + PD++T N + + ++ I+ ++ ++ SG S + Y L+
Sbjct: 276 MESTLLEMLSEKCKPDVWTMNSTLRAFGSSGQIEMMESCYEKFQA-SGISPNIKTYNILL 334
Query: 271 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 330
+ Y A + + + +K +TY+ +I + G+ ++++ I++ ++ +
Sbjct: 335 DSYGKA-KMYEKMGAVMEYMQKYYYSWTIVTYNVVIDAFGRAGDLEQMEYIFRLMKSDRI 393
Query: 331 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG-LTEKA 389
K ++ +Y +K++ ++ + S T+ DI N L+ A+ VG L E
Sbjct: 394 KPNCVTLCSLIRAYGRADQVKKIETVLRIIENSDTT-LDIVFFNCLVDAYGRVGCLAEMW 452
Query: 390 NEFHMLLLQK 399
+ +M+ L++
Sbjct: 453 DVLNMMKLER 462
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 77/180 (42%), Gaps = 5/180 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T + L + + E E +E+ + S +S N YN ++ Y EK+ V+E +
Sbjct: 294 TMNSTLRAFGSSGQIEMMESCYEKFQASGISPNIKTYNILLDSYGKAKMYEKMGAVMEYM 353
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
++ I TYN+ I + +++Q++ M D + V +L+ Y A
Sbjct: 354 QKYYYSWTIVTYNVVIDAFGRAGDLEQMEYIFRLMKSDR-IKPNCVTLCSLIRAYGRADQ 412
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ E + L E S T + ++ L+ Y +G + ++W L M K + S + +
Sbjct: 413 VKKIE-TVLRIIENSDTTLDIVFFNCLVDAYGRVGC---LAEMWDVLNMMKLERVSPDKV 468
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/249 (19%), Positives = 112/249 (44%), Gaps = 3/249 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
++++L+ +++ + ++A F +K+ L + ++Y +M Y G + + + +E+
Sbjct: 108 SFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEM 167
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ V D+ YN ++ + K DEM + G D+ + L++ + +
Sbjct: 168 LEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEM-VERGALPDFYTFTTLIHGHCQDGN 226
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ A S +++I + + Y+ LI + +G +K ++W + K Y
Sbjct: 227 MTKALSLFGTMTQRNI-KPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYG 285
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
++++Y +GH+ E + D + + CN ++ + G + KA+EF ++
Sbjct: 286 ILINAYCSVGHVSEAFRLWDVMIEKGIKP-TLVTCNTVIKGYCRSGDSSKADEFLGRMIA 344
Query: 399 KNCAPTNAS 407
K AP + S
Sbjct: 345 KGVAPDHIS 353
>gi|302776756|ref|XP_002971525.1| hypothetical protein SELMODRAFT_95815 [Selaginella moellendorffii]
gi|300160657|gb|EFJ27274.1| hypothetical protein SELMODRAFT_95815 [Selaginella moellendorffii]
Length = 356
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 102/232 (43%), Gaps = 5/232 (2%)
Query: 177 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 236
+ LF +K ++ YN ++ + G ++KV V+ E+ R+ + PD+F++N I++
Sbjct: 83 DRLFLEIKSRGVALTLRSYNVVICAFTKEGSIDKVEEVIREMIRQELRPDLFSFNALIAA 142
Query: 237 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 296
A + ++ + M +G D V Y L+ ++ + S + E + Q
Sbjct: 143 YAMSRKPERGLQVFSNMKA-AGVLPDIVTYTTLIQMF-SRSAMHKEAIEMFEEMVVNKCQ 200
Query: 297 RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 356
+ Y L+ +Y G I+ L++ + Y ++S++L G L+E +
Sbjct: 201 PDFFVYSLLVSVYGKAGLVADALLIFHRLQLEGHRPNIVTYTSLISAHLHKGLLEESRKH 260
Query: 357 IDQWKQSATSDFDISACNRLLGAFSDVGLT-EKANEFHMLLLQKNCAPTNAS 407
Q + D+ N ++ A++ G+ + AN H L Q C P AS
Sbjct: 261 FSQMEAYGCRA-DVHLLNTMIDAYAKAGMVNDAANLLHRLTAQGVC-PNRAS 310
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 58/118 (49%), Gaps = 5/118 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT L+ +++ + ++A E+FE + + + +Y+ ++++Y G V L+ +
Sbjct: 170 TYTTLIQMFSRSAMHKEAIEMFEEMVVNKCQPDFFVYSLLVSVYGKAGLVADALLIFHRL 229
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
+ + P+I TY IS+ +++ +K +M +D V+L+N I A
Sbjct: 230 QLEGHRPNIVTYTSLISAHLHKGLLEESRKHFSQMEAYGCRAD-----VHLLNTMIDA 282
>gi|302804554|ref|XP_002984029.1| hypothetical protein SELMODRAFT_445736 [Selaginella moellendorffii]
gi|300148381|gb|EFJ15041.1| hypothetical protein SELMODRAFT_445736 [Selaginella moellendorffii]
Length = 547
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/354 (20%), Positives = 151/354 (42%), Gaps = 48/354 (13%)
Query: 46 DEETSNSDGKDDLKSRIFRISLPKRSATNVIQR---WVSEGNQATVSELRHILKELRKSQ 102
DE+ S +D ++ K + +SL ++ ++R W ++GN T + +++ L +
Sbjct: 50 DEDESGNDPEEGKKEKGSLVSLCLKTPDLSVRRIEAWAAQGNTVTQGNISEVIEALCVQK 109
Query: 103 RYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTS-ETYT 161
R+ AL + E+ +FV S D + + T+ G +G++ LP +++ E
Sbjct: 110 RFLAALRVMEFARQRTDFVFSLEDAKQEVTIATRKLGSFAGQKKINSLPEKFRSNEEVVA 169
Query: 162 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 221
A L KA L + +K + + +Y+ M+++Y + EK+ + ++K
Sbjct: 170 AYLRALTRINAASKALSLIKDLKPTTPA----LYSSMISVYAFLAMHEKMLALYTDMKEL 225
Query: 222 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 281
+ P TL I V L + GG + A ++
Sbjct: 226 GIKP--------------TLEI--VMLMLLKYHKRVGG------LPGIEEEARAALEEID 263
Query: 282 AESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICIL 341
++ + + ++++ +Y LG++DK++ IW +R + T RN C
Sbjct: 264 PHAA------------EPLIRNYMLEMYGYLGDRDKVENIWSIIR-AQPGGTFRN--CYF 308
Query: 342 SSYLMLGHLKEVGEIIDQWKQSATSDFDISACN---RLLGAFSDVGLTEKANEF 392
S+ L G+L++V + ++S I N ++L ++ +G+ +KA +
Sbjct: 309 SAMLAFGYLQDVDRAEELLRESVEVVKVIPGRNQYFKMLDVYAKMGMMDKAEKL 362
>gi|125580966|gb|EAZ21897.1| hypothetical protein OsJ_05550 [Oryza sativa Japonica Group]
Length = 595
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 103/236 (43%), Gaps = 6/236 (2%)
Query: 149 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 208
G+P +A Y A L A+ TEKA E+++R+K+ N + M+ +Y Q
Sbjct: 240 GIPPNATV---YNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQP 296
Query: 209 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268
V E+K P+I TY +++ A ++ ++ +EM +G D Y
Sbjct: 297 MSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQ-QAGHEPDVYAYNA 355
Query: 269 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 328
L+ Y A L S + + +Y+ L+ Y G + + +++ L+
Sbjct: 356 LMEAYSRAG-LPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQR 414
Query: 329 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 384
T ++++ +L+++ G+ E++ Q +S + D A N +L A++ G
Sbjct: 415 GMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTP-DTFALNAMLNAYARAG 469
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 97/233 (41%), Gaps = 14/233 (6%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
+ET+T ++++Y AK + ++F +K N Y ++ + G EK V E
Sbjct: 280 TETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFE 339
Query: 217 EIKRKNVVPDIFTYNLWI---SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
E+++ PD++ YN + S ++ + M C+ D Y LV+ Y
Sbjct: 340 EMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEP----DRASYNILVDAY 395
Query: 274 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
A +AE + E ++ ++ L+ +A GN + +++ L K +T
Sbjct: 396 GRAGLHEDAE-AVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLH--KSGLT 452
Query: 334 SRNYI--CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 384
+ +L++Y G L ++ + ++ D D+ N + A+ G
Sbjct: 453 PDTFALNAMLNAYARAGRLDDMERLFAAMERRG--DADVGTYNVAVNAYGRAG 503
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 46/249 (18%), Positives = 95/249 (38%), Gaps = 40/249 (16%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y L+ Y + KAE ++ + ++ Y ++ Y + G + + V+ E++
Sbjct: 178 YNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMR 237
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
+ P+ YN ++ ++ + M + ++ + ++N+Y A
Sbjct: 238 EHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTET-FTLMINVYGKAKQP 296
Query: 280 VNAESSTLVEAEKSITQRQWI-TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
++ S + KSI + I TY L+ +A G +K +++++ +
Sbjct: 297 MS--SMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEM------------- 341
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
Q A + D+ A N L+ A+S GL + A+E L+
Sbjct: 342 -----------------------QQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQH 378
Query: 399 KNCAPTNAS 407
C P AS
Sbjct: 379 MGCEPDRAS 387
>gi|449455399|ref|XP_004145440.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Cucumis sativus]
Length = 576
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 107/256 (41%), Gaps = 17/256 (6%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
T++TYT L+++Y + A+ +F+ ++ N + ++ G EK +
Sbjct: 258 PTTDTYTMLINVYGKESKSHMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEI 317
Query: 215 VEEIKRKNVVPDIFTYNLWISS---CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
E+++ PD++ YN + S ++ + M C+ D Y +V+
Sbjct: 318 FEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEP----DRASYNIMVD 373
Query: 272 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLII-LYAGLGNKDKIDQIWKSLRMTKQ 330
Y A ++ ++ + E K I + L++ Y+ GN K + I +M K
Sbjct: 374 AYGRAG--LHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAKCEDIIG--QMHKS 429
Query: 331 KMTSRNYICILSSYLML-GHLKEVGEIIDQWK--QSATSDFDISACNRLLGAFSDVGLTE 387
+ + +++S L L G L + G++ D + Q DIS N L+ + G E
Sbjct: 430 GLKPDTF--VMNSMLNLYGRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGFVE 487
Query: 388 KANEFHMLLLQKNCAP 403
+ E LL KN P
Sbjct: 488 RMEELFQLLPAKNLEP 503
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Query: 151 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 210
P A S TY L+++Y A + E+ EELF+ + NL + + + + Y ++
Sbjct: 465 PCRADIS-TYNILINVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKR 523
Query: 211 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCD 256
+ E++ PD T + +S+C++ I+QV + M D
Sbjct: 524 CLELFEKMIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVVRTMHKD 569
>gi|357153691|ref|XP_003576535.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
chloroplastic-like [Brachypodium distachyon]
Length = 936
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 4/122 (3%)
Query: 149 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 208
G P+S E Y +L+ Y A E+ + ++++++ F+ YN M+ +Y G +
Sbjct: 788 GFPVSL---EAYNCMLNAYGKAGQLEEFAAVLQKMRRAKCDFDHYTYNIMLNIYGRKGWI 844
Query: 209 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268
E VA V+ E+K + V PD+++YN I + + K + EM G + D + Y N
Sbjct: 845 EGVAYVLSELKSRGVEPDLYSYNTLIKAYGIAGMPEDAVKLMQEMRL-KGINADRITYTN 903
Query: 269 LV 270
L+
Sbjct: 904 LI 905
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 105/247 (42%), Gaps = 11/247 (4%)
Query: 148 EGLPLSAKTSE------TYTALLHLYAGAKWTEKAEELFERV-KQSNLSFNALMYNEMMT 200
E L L KTS Y+ ++ +Y A E A + E + KQ + + ++ +M+
Sbjct: 603 ETLYLELKTSACVLDMIAYSVIVRMYTKAGRPEDACSVLEDMEKQKEIVPDKYLFLDMLR 662
Query: 201 LYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGS 260
Y G +EK+ I + V D N I+ C + +D++ + DEM G
Sbjct: 663 TYQKCGLLEKLTDTYYWILKSQVECDEAMNNCIINCCGPAIPVDELTRIFDEM-IQLGHM 721
Query: 261 DDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQ 320
+ L++IY A L N A K Q I+Y+ +I YA G+ +
Sbjct: 722 ASTITLNVLLDIYGKAG-LFNRAQKVFNMARKQ-GQADIISYNTIIAAYAHSGDFRSMTY 779
Query: 321 IWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAF 380
+ ++ ++ Y C+L++Y G L+E ++ + ++ A DFD N +L +
Sbjct: 780 FVQKMQDAGFPVSLEAYNCMLNAYGKAGQLEEFAAVLQKMRR-AKCDFDHYTYNIMLNIY 838
Query: 381 SDVGLTE 387
G E
Sbjct: 839 GRKGWIE 845
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 5/118 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY AL++ Y K E+A ELF+ + + L+ N + +N ++ Y G++E+ L+ + +
Sbjct: 375 TYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVM 434
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
K +P+ TYN I +++VK L+EM C G D V Y NI I+A
Sbjct: 435 LEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQC-RGVKADTVTY----NILISA 487
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/206 (17%), Positives = 91/206 (44%), Gaps = 2/206 (0%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
+ S T+ L+ + + A ++FE ++ L + YN ++ + G++ + +
Sbjct: 300 SPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKV 359
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
+++E+ N+ P++ TYN I+ +++ ++ D + G + + + + L++ Y
Sbjct: 360 LLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIG-KQGLTPNVITFNTLLHGY 418
Query: 274 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
+ A V EK TY+ LI+ + G +++ + ++ K
Sbjct: 419 CKFGKMEEAFLLQKVMLEKGFLPNAS-TYNCLIVGFCREGKMEEVKNLLNEMQCRGVKAD 477
Query: 334 SRNYICILSSYLMLGHLKEVGEIIDQ 359
+ Y ++S++ K+ +ID+
Sbjct: 478 TVTYNILISAWCEKKEPKKAARLIDE 503
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 46/233 (19%), Positives = 101/233 (43%), Gaps = 3/233 (1%)
Query: 175 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 234
KA+ + + + ++ +S N++ +N ++ + + V EE++ + + P + TYN +
Sbjct: 286 KADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLV 345
Query: 235 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 294
+ +++ K LDEM S + + Y L+N Y L A ++ +
Sbjct: 346 NGLCNEGKLNEAKVLLDEM-LSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGL 404
Query: 295 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 354
T IT++ L+ Y G ++ + K + + Y C++ + G ++EV
Sbjct: 405 TP-NVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVK 463
Query: 355 EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
++++ Q D N L+ A+ + +KA +L K P++ +
Sbjct: 464 NLLNEM-QCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLT 515
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 107/239 (44%), Gaps = 15/239 (6%)
Query: 176 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
E +++ + + +S N + +N ++ VG++ K VV+++K P++ TYN I
Sbjct: 214 VEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLID 273
Query: 236 SCAATLNIDQVKK---FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 292
+ ++ K L EM ++ S + V + L++ + +L +A E +
Sbjct: 274 GYCKMGRVGKMYKADAILKEMV-ENKVSPNSVTFNVLIDGFCKDENL-SAALKVFEEMQS 331
Query: 293 SITQRQWITYDFLIILYAGLGNKDKIDQ---IWKSLRMTKQKMTSRNYICILSSYLMLGH 349
+ +TY+ L+ GL N+ K+++ + + + K Y +++ Y
Sbjct: 332 QGLKPTVVTYNSLV---NGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKL 388
Query: 350 LKEVGEIIDQ-WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
L+E E+ D KQ T ++ N LL + G E+A ++L+K P NAS
Sbjct: 389 LEEARELFDNIGKQGLTP--NVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLP-NAS 444
>gi|356495741|ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 82/191 (42%), Gaps = 9/191 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
Y LL ++A+ +F + + +A Y+ + Y V+ V++++
Sbjct: 253 AYNNLLQALCKGGRVDEAKNIFHDMLSKRVEPDAFTYSIFIHSYCDADDVQSAFRVLDKM 312
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+R N++P++FTYN I ++++ + LDEM D W N + Y
Sbjct: 313 RRYNLLPNVFTYNCIIKQLCKNEHVEEAYQLLDEMISRGVKPDTWS--YNAIQAYHCDHC 370
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
VN + EK I TY+ ++ L +G DK+ ++W + M + +
Sbjct: 371 EVNRALRLMFRMEKDICLPDRHTYNMVLKLLIRIGRFDKVTEVW-------ENMVDKKFY 423
Query: 339 CILSSYLMLGH 349
+S+Y ++ H
Sbjct: 424 PSVSTYSVMIH 434
>gi|225447241|ref|XP_002272784.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g73710-like [Vitis vinifera]
Length = 1008
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 117/276 (42%), Gaps = 10/276 (3%)
Query: 133 LMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNA 192
L K F + G R P TY +L+ +++G ++A + +++
Sbjct: 569 LYDKAFSLFKGMRNHGTWP----NESTYNSLIQMFSGGDLVDEARGILAEMQKMGFKPQC 624
Query: 193 LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 252
L ++ ++ Y +G++ V EE+ R V P+ Y I+ + T N+++ + +
Sbjct: 625 LTFSAVIACYARLGRLPDAVGVYEEMVRLGVKPNEVVYGSLINGFSETGNVEEALCYFRK 684
Query: 253 MSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI-TQRQWITYDFLIILYAG 311
M + G S + + +L+ Y L A+ TL E K + + + +I LYA
Sbjct: 685 MD-EFGISANQIVLTSLIKAYSKVGCLEGAK--TLYEGMKDLEGGPDIVASNSMINLYAD 741
Query: 312 LGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDIS 371
LG + I+ LR K ++ ++ Y LG L E ++ D+ KQS D +
Sbjct: 742 LGLVSEAKLIFDDLRQ-KGSADGVSFATMMYLYKNLGMLDEAIDVADEMKQSGLLR-DCA 799
Query: 372 ACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
+ N+++ ++ G E ++ + P +
Sbjct: 800 SFNKVMACYATNGQLSACGELLHEMISRRILPDTGT 835
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 111/236 (47%), Gaps = 4/236 (1%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
+ + TY L+ LY A + A ++F + + ++ + + +N M+ S G + +
Sbjct: 342 PRLTATYNTLIDLYGKAGRLKDAADVFAEMLKLGVAMDTITFNTMIYTCGSHGHLSEAET 401
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
++ E++ + + PD TYN+++S A NID K ++ + G D V + ++++
Sbjct: 402 LLTEMEERGISPDTKTYNIFLSLYADGGNIDAALKCYRKIR-EVGLFPDVVTHRAVLHV- 459
Query: 274 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
+ ++V + + E ++S + + +I +Y G DK +I+ + + +++
Sbjct: 460 LCERNMVGEVETVIAEMKRSRVRVDEHSIPVVIKMYVNEGLLDKA-KIFLEEHLLEDELS 518
Query: 334 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
SR + I+ +Y G E E + K+ D+ N ++ A+ L +KA
Sbjct: 519 SRTRVAIIDAYAEKGLWAE-AENVFIGKRDLGQKKDVVEYNVMVKAYGKAKLYDKA 573
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
++ +++LY ++A ++ + +KQS L + +N++M Y + GQ+ ++ E+
Sbjct: 765 SFATMMYLYKNLGMLDEAIDVADEMKQSGLLRDCASFNKVMACYATNGQLSACGELLHEM 824
Query: 219 KRKNVVPDIFTYNLWISSC-AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
+ ++PD T+ + + L + V + E S G + + + +++ T
Sbjct: 825 ISRRILPDTGTFKVMFTVLKKGGLPTEAVTQL--ESSYQEG--KPYARQAVITSVFSTVG 880
Query: 278 -HLVNAES-STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
H ES T + AE + Y+ I Y G+ DK +++ ++ +
Sbjct: 881 LHAFALESCETFLNAEVDLDSS---FYNVAIYAYGASGSIDKALKMFMKMQDEGLEPDLV 937
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWK 361
YI + Y G L+ + I Q K
Sbjct: 938 TYINLAGCYGKAGMLEGLKRIYSQLK 963
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/249 (19%), Positives = 112/249 (44%), Gaps = 3/249 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
++++L+ +++ + ++A F +K+ L + ++Y +M Y G + + + +E+
Sbjct: 260 SFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEM 319
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ V D+ YN ++ + K DEM + G D+ + L++ + +
Sbjct: 320 LEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEM-VERGALPDFYTFTTLIHGHCQDGN 378
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ A S +++I + + Y+ LI + +G +K ++W + K Y
Sbjct: 379 MTKALSLFGTMTQRNI-KPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYG 437
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
++++Y +GH+ E + D + + CN ++ + G + KA+EF ++
Sbjct: 438 ILINAYCSVGHVSEAFRLWDVMIEKGIKP-TLVTCNTVIKGYCRSGDSSKADEFLGRMIA 496
Query: 399 KNCAPTNAS 407
K AP + S
Sbjct: 497 KGVAPDHIS 505
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 109/252 (43%), Gaps = 11/252 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+T L+H + KA LF + Q N+ + + YN ++ + VG++EK + + + +
Sbjct: 365 TFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGM 424
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + P+ TY + I++ + ++ + + D M + G V ++ Y +
Sbjct: 425 ISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVM-IEKGIKPTLVTCNTVIKGYCRSGD 483
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQ--IWKSLRMTKQKMTSR- 335
A+ K + I+Y+ LI G +D +D+ +W + +M K+ +
Sbjct: 484 SSKADEFLGRMIAKGVAPDH-ISYNTLI---NGFVREDNMDKAFLWIN-KMEKEGLLPDI 538
Query: 336 -NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 394
Y +++ + G ++E ++ + + + D S L+ +A FH
Sbjct: 539 ITYNVVMNGFCRQGRMQEAELVLRKMIEKGINP-DRSTYTALINGHVTQDNLNEAFRFHD 597
Query: 395 LLLQKNCAPTNA 406
+LQ+ AP +
Sbjct: 598 EMLQRGFAPDDV 609
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
T T ++ Y + + KA+E R+ ++ + + YN ++ ++ ++K L +
Sbjct: 467 TLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWI 526
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275
+++++ ++PDI TYN+ ++ + + + L +M + G + D Y L+N ++T
Sbjct: 527 NKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKM-IEKGINPDRSTYTALINGHVT 585
Query: 276 ASHL 279
+L
Sbjct: 586 QDNL 589
>gi|147771903|emb|CAN75708.1| hypothetical protein VITISV_031421 [Vitis vinifera]
Length = 1313
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 121/292 (41%), Gaps = 26/292 (8%)
Query: 133 LMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNA 192
L K F + G R P TY +L+ +++G ++A ++ +++
Sbjct: 874 LYDKAFSLFKGMRNHGTWP----NESTYNSLIQMFSGGDLVDEARDILAEMQKMGFKPQC 929
Query: 193 LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 252
L ++ ++ Y +G++ V EE+ R V P+ Y I+ + T N+++ + +
Sbjct: 930 LTFSAVIACYARLGRLPDAVGVYEEMVRLGVKPNEVVYGSLINGFSETGNVEEALCYFRK 989
Query: 253 MSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI-TQRQWITYDFLIILYAG 311
M + G S + + +L+ Y L A+ TL E K + + + +I LYA
Sbjct: 990 MD-EFGISANQIVLTSLIKAYSKVGCLEGAK--TLYEGMKDLEGGPDIVASNSMINLYAD 1046
Query: 312 LGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA------- 364
LG + I+ LR K ++ ++ Y LG L E ++ D+ KQS
Sbjct: 1047 LGLVSEAKLIFDDLRQ-KGSADGVSFATMMYLYKNLGMLDEAIDVADEMKQSGFLRDCAS 1105
Query: 365 --------TSDFDISACNRLLGAFSDVGLTEKANEFHML--LLQKNCAPTNA 406
++ +SAC LL + F ++ +L+K PT A
Sbjct: 1106 FNKVMACYATNGQLSACGELLHEMISRRILPDTGTFKVMFTVLKKGGLPTEA 1157
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 111/236 (47%), Gaps = 4/236 (1%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
+ + TY L+ LY A + A ++F + + ++ + + +N M+ S G + +
Sbjct: 647 PRLTATYNTLIDLYGKAGRLKDAADVFAEMLKLGVAMDTITFNTMIYTCGSHGHLSEAET 706
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
++ E++ + + PD TYN+++S A NID K ++ + G D V + ++++
Sbjct: 707 LLTEMEERGISPDTKTYNIFLSLYADGGNIDAALKCYRKIR-EVGLFPDVVTHRAVLHV- 764
Query: 274 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
+ ++V + + E ++S + + +I +Y G DK +I+ + + +++
Sbjct: 765 LCERNMVGEVETVIAEMKRSRVRVDEHSIPVVIKMYVNEGLLDKA-KIFLEEHLLEDELS 823
Query: 334 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
SR + I+ +Y G E E + K+ D+ N ++ A+ L +KA
Sbjct: 824 SRTRVAIIDAYAEKGLWAE-AENVFIGKRDLGQKKDVVEYNVMVKAYGKAKLYDKA 878
>gi|255580124|ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529547|gb|EEF31500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 113/264 (42%), Gaps = 7/264 (2%)
Query: 64 RISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLS 123
R +LP A R V G + T+ +L +L L K + KHA +I + V H +F
Sbjct: 156 RANLPS-DAIRAFDRMVEFGLKPTIDDLDQLLYVLCKRKHAKHAQQIFD-RVKH-QFQTR 212
Query: 124 DSDYATRIDLMTKVFGIHSGERYFEGL--PLSAKTSETYTALLHLYAGAKWTEKAEELFE 181
Y+ + + S + F+ + A Y +LL + +A ++F
Sbjct: 213 AKTYSILVRGWGDIGESVSACKVFDEMREQQCAVDVLAYNSLLEAFCKGGKVSEAYKMFR 272
Query: 182 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL 241
+ + + +A ++ + Y + V++E+KR ++VP++FTYN I
Sbjct: 273 EMGSNGIKPDACTFSIFIRAYCEANDIHLAYRVLDEMKRYDLVPNVFTYNCMIKKLCKKE 332
Query: 242 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWIT 301
+++ + L+E+ SG D W N + Y VN+ + + K +
Sbjct: 333 KVEEAYQLLNEIIERSGQPDAWS--YNAILAYHCEHSEVNSATRLISRMVKDNCLPDKHS 390
Query: 302 YDFLIILYAGLGNKDKIDQIWKSL 325
Y+ L+ L +G D+ ++W+S+
Sbjct: 391 YNMLLKLLIRVGRFDRAIEVWESM 414
>gi|168047776|ref|XP_001776345.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672305|gb|EDQ58844.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 503
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 107/242 (44%), Gaps = 20/242 (8%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL---VVE 216
Y L+ Y E+AE L +++ + N YN ++T Y+ + + ++E
Sbjct: 212 YNILIDAYGRVGQLEEAEGLMTEMRERGIQPNVGTYNALITGYLEAKPKRQFVVAEGLIE 271
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
E++ + PD+ T+ + + + +Q ++ + M G + Y L+N Y
Sbjct: 272 EMEASGLYPDVVTFTMLLGAYGHEGLTEQAEQVFNRMKA-RGVQPNSYSYTALINAY--- 327
Query: 277 SHLVNAESSTLVEAEKS--ITQRQWI-----TYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
AE +A ++ + ++Q + TY L+ Y G+ + + +WKS+++
Sbjct: 328 -----AERRCPEKAARAFEMIRKQGVNPTVETYTALLDAYRRAGDLEMVQAVWKSMKVEG 382
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
T Y+ IL ++ G KE ++I+++K D+ N LL ++ G KA
Sbjct: 383 CVATRVTYMTILDAFQKQGRYKEARDLIEEFKNQGHKP-DLMVYNMLLNSYMRGGRHVKA 441
Query: 390 NE 391
++
Sbjct: 442 SD 443
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 79/188 (42%), Gaps = 4/188 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+T LL Y TE+AE++F R+K + N+ Y ++ Y EK A E I
Sbjct: 284 TFTMLLGAYGHEGLTEQAEQVFNRMKARGVQPNSYSYTALINAYAERRCPEKAARAFEMI 343
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+++ V P + TY + + +++ V+ M + G V Y+ +++ +
Sbjct: 344 RKQGVNPTVETYTALLDAYRRAGDLEMVQAVWKSMKVE-GCVATRVTYMTILDAFQKQGR 402
Query: 279 LVNAESSTLVEAEKSITQRQ-WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
E+ L+E K+ + + Y+ L+ Y G K I ++ S Y
Sbjct: 403 Y--KEARDLIEEFKNQGHKPDLMVYNMLLNSYMRGGRHVKASDILLEMKTAGFLPDSFTY 460
Query: 338 ICILSSYL 345
++ +L
Sbjct: 461 CTLIYGFL 468
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 78/176 (44%), Gaps = 8/176 (4%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
S +YTAL++ YA + EKA FE +++ ++ Y ++ Y G +E V V +
Sbjct: 317 SYSYTALINAYAERRCPEKAARAFEMIRKQGVNPTVETYTALLDAYRRAGDLEMVQAVWK 376
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
+K + V TY + + + + ++E + G D + Y L+N Y+
Sbjct: 377 SMKVEGCVATRVTYMTILDAFQKQGRYKEARDLIEEFK-NQGHKPDLMVYNMLLNSYMRG 435
Query: 277 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 332
V A S L+E + + TY LI Y L +D+ K+L+ ++ M
Sbjct: 436 GRHVKA-SDILLEMKTAGFLPDSFTYCTLI--YGFLRVRDQT----KALKYHREMM 484
Score = 38.1 bits (87), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 41/82 (50%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
T ETYTALL Y A E + +++ +K + Y ++ + G+ ++ +
Sbjct: 350 PTVETYTALLDAYRRAGDLEMVQAVWKSMKVEGCVATRVTYMTILDAFQKQGRYKEARDL 409
Query: 215 VEEIKRKNVVPDIFTYNLWISS 236
+EE K + PD+ YN+ ++S
Sbjct: 410 IEEFKNQGHKPDLMVYNMLLNS 431
>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 101/234 (43%), Gaps = 9/234 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+ +LL + + E A LF + + + YN ++ GQ++ ++ E+
Sbjct: 298 TFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEM 357
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
KN++P++ TY+ I A +D +EM G D V Y L+++Y
Sbjct: 358 PTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDR-VSYNTLLSVYAKLGR 416
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN-- 336
A E E + ++ +TY+ L+ AG G + + D++ + K+ S N
Sbjct: 417 FEQA-LDVCKEMENAGIRKDVVTYNALL---AGYGKQYRYDEVRRVFEEMKRGRVSPNLL 472
Query: 337 -YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
Y ++ Y G KE E+ ++KQ+ D+ + L+ A GL E +
Sbjct: 473 TYSTLIDVYSKGGLYKEAMEVFREFKQAGLKA-DVVLYSALIDALCKNGLVESS 525
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY+ L+ +Y+ ++A E+F KQ+ L + ++Y+ ++ G VE +++E+
Sbjct: 473 TYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEM 532
Query: 219 KRKNVVPDIFTYNLWISS 236
++ + P++ TYN I +
Sbjct: 533 TKEGIRPNVVTYNSIIDA 550
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY ALL Y ++ +FE +K+ +S N L Y+ ++ +Y G ++ V E
Sbjct: 438 TYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREF 497
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
K+ + D+ Y+ I + ++ LDEM+ G + V Y ++++ +
Sbjct: 498 KQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMT-KEGIRPNVVTYNSIIDAF 551
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 111/249 (44%), Gaps = 10/249 (4%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
ETY L+ Y ++ ++ E++++ + N + Y ++ G++ + +V+ +
Sbjct: 457 ETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRD 516
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
+ + V+P+ YN+ I + +F DEM S S V Y L++
Sbjct: 517 MICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMM-RSEISPTLVTYNVLIDGLCKKG 575
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
L AE L + S ITY+ LI YA GN K ++++++ K T R Y
Sbjct: 576 KLTEAE-DFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTY 634
Query: 338 ICILSSYLMLGHLKEVGEIIDQ-WKQSATSDF--DISACNRLLGAFSDVGLTEKANEFHM 394
++S G KE E++++ + + + D N ++ ++++G T+KA H
Sbjct: 635 HPLIS-----GCSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQ 689
Query: 395 LLLQKNCAP 403
+L + P
Sbjct: 690 GMLDQGIHP 698
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 104/248 (41%), Gaps = 9/248 (3%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y L+ K AE++F+ + NL + + YN ++ Y VG+++ + E +K
Sbjct: 214 YNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMK 273
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
K+V P+I T+N +S + + + L EM + G D Y L + +
Sbjct: 274 EKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVN-GFMPDGYTYSILFDGLLRCDDG 332
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL-RMTKQKMTSRNYI 338
A EK I + IL GL + K+++ + L + T+ + + I
Sbjct: 333 NGAMELYEQATEKGIRINNYTGS----ILLNGLCKQGKVEKAEEILKKFTENGLVADEVI 388
Query: 339 --CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 396
++ Y +G + + I++ + I+ N L+ F D+ +KA E+ +
Sbjct: 389 YNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITF-NSLIDKFCDMKEMDKAEEWVKKM 447
Query: 397 LQKNCAPT 404
+K P+
Sbjct: 448 AEKGVTPS 455
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 92/230 (40%), Gaps = 3/230 (1%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y ++ Y KA ER++ L N++ +N ++ + + +++K V+++
Sbjct: 389 YNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMA 448
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
K V P + TYN I D+ + L++M + G + V Y +L+N +
Sbjct: 449 EKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQME-EIGVKPNVVSYGSLINCLCKDGKI 507
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 339
+ AE + + + Y+ LI +G + + + ++ T Y
Sbjct: 508 LEAEIVLRDMICRGVLPNAQV-YNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNV 566
Query: 340 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
++ G L E + + Q S S D+ N L+ +++ G K
Sbjct: 567 LIDGLCKKGKLTEAEDFLTQITSSGHSP-DVITYNSLISGYANAGNVSKC 615
Score = 38.1 bits (87), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 57/132 (43%), Gaps = 2/132 (1%)
Query: 175 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 234
K +LF ++ S + MY + + + + ++ ++ ++++ V P++F YN+ I
Sbjct: 159 KVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLI 218
Query: 235 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 294
I +K DEM C+ V Y L++ Y L A EKS+
Sbjct: 219 GGLCREKRIRDAEKMFDEM-CNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSV 277
Query: 295 TQRQWITYDFLI 306
IT++ L+
Sbjct: 278 AP-NIITFNSLL 288
>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
Length = 817
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 97/213 (45%), Gaps = 14/213 (6%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY+ ++ A+ TE+ ++LF+ + +NL N ++YN ++ Y G++ + E++
Sbjct: 604 TYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDM 663
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K K + P+ TY I + +++ K L+EM + G + Y L++ Y
Sbjct: 664 KHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRME-GLEPNVFHYTALIDGYGKLGQ 722
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR---MTKQKMTSR 335
+V E L E ITY +I YA GN + ++ +R + +T +
Sbjct: 723 MVKVE-CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYK 781
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDF 368
+I G+LK+ G ++ +K S ++
Sbjct: 782 EFI--------YGYLKQ-GGVLQAFKGSDEENY 805
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 1/129 (0%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
+ S TYT+L+ + E+A+ L E ++ L N Y ++ Y +GQ+ KV
Sbjct: 669 SPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVEC 728
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
++ E+ KNV P+ TY + I A N+ + + L EM + G D + Y + Y
Sbjct: 729 LLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMR-EKGIVPDSITYKEFIYGY 787
Query: 274 ITASHLVNA 282
+ ++ A
Sbjct: 788 LKQGGVLQA 796
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 93/202 (46%), Gaps = 6/202 (2%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
+T ++ + E+A ELF +++++ + N + YN ++ G+ ++ + E++
Sbjct: 255 FTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMV 314
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
+ V P + TY++ + I L EM+ + G + + Y NL++ I A L
Sbjct: 315 ERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMT-EKGFPPNVIVYNNLIDSLIEAGSL 373
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK---SLRMTKQKMTSRN 336
A + K ++ TY+ LI Y G D +++ K S+ + + +
Sbjct: 374 NKAIEIKDLMVSKGLSLTSS-TYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTS 432
Query: 337 YICILSSYLML-GHLKEVGEII 357
IC+L S+ M L+ VGE++
Sbjct: 433 VICLLCSHHMFDSALRFVGEML 454
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 99/235 (42%), Gaps = 2/235 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y L+ G K ++A + + + L + Y+ ++ +++ +VE+ +
Sbjct: 534 SYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDC 593
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
KR ++PD++TY++ I C ++ +K DEM ++ + V Y +L+ Y +
Sbjct: 594 KRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNN-LQPNTVVYNHLIGAYCRSGR 652
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L A K I+ TY LI + + ++ + + +RM + +Y
Sbjct: 653 LSMALELREDMKHKGISPNSA-TYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYT 711
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 393
++ Y LG + +V ++ + I+ + G D +TE + H
Sbjct: 712 ALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLH 766
>gi|18394846|ref|NP_564110.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174883|sp|Q9LN22.1|PPR54_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g20300, mitochondrial; Flags: Precursor
gi|9558596|gb|AAF88159.1|AC026234_10 Contains similarity to a hypothetical protein T3P18.15 gi|5454201
from Arabidopsis thaliana BAC T3P18 gb|AC005698 and
contains multiple PPR PF|01535 repeats [Arabidopsis
thaliana]
gi|17386104|gb|AAL38598.1|AF446865_1 At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|15450347|gb|AAK96467.1| At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|332191838|gb|AEE29959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 112/265 (42%), Gaps = 10/265 (3%)
Query: 140 IHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE--KAEELFERVKQSNLSFNALMYNE 197
I E+ F+ + L+ YT + + A + + +A ++F + S + NA+ +N
Sbjct: 271 ISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNN 330
Query: 198 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM---S 254
+M +++ G+ EKV V ++K+ PD TYN I + N++ K L+ M
Sbjct: 331 LMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKK 390
Query: 255 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 314
C+ S N + YI VN + ++ + +TY+ L+ ++ G +
Sbjct: 391 CEVNAST-----FNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKS 445
Query: 315 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 374
D + ++ K + + + Y +++ + +GH ++ + + +S
Sbjct: 446 TDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYE 505
Query: 375 RLLGAFSDVGLTEKANEFHMLLLQK 399
+L G +K E ++QK
Sbjct: 506 MVLAQLRRAGQLKKHEELVEKMIQK 530
>gi|302769103|ref|XP_002967971.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
gi|300164709|gb|EFJ31318.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
Length = 1354
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 101/246 (41%), Gaps = 38/246 (15%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
+ + ALL LY+ AEEL + +K++ L + +YN M++LY +G K ALV +
Sbjct: 776 QVFKALLALYSRETVEIDAEELVKDIKKAGLELDMDIYNHMISLYSKLGSYRKAALVFKG 835
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
++ PD T+N I + + + + L EM +K N NI
Sbjct: 836 MQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREM----------IKTGNAPNIS---- 881
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
TY LI Y L + + ++KS+ T K + Y
Sbjct: 882 -----------------------TYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAY 918
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 397
+++ Y G +++ E+I+Q K ++ + L+ ++ G T KA E L
Sbjct: 919 NVMINVYRKAGEHRKIEEVIEQMKADGFEP-SLTTIHMLMDSYGKGGATGKAEEVLETLP 977
Query: 398 QKNCAP 403
+ +P
Sbjct: 978 EIGMSP 983
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 65/132 (49%), Gaps = 12/132 (9%)
Query: 153 SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVA 212
+A TYT L+ Y + E AE +F+ + ++ +A YN M+ +Y G+ K+
Sbjct: 876 NAPNISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIE 935
Query: 213 LVVEEIKRKNVVPDIFTYNLWISS---CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
V+E++K P + T ++ + S AT ++V + L E+ G S D + Y ++
Sbjct: 936 EVIEQMKADGFEPSLTTIHMLMDSYGKGGATGKAEEVLETLPEI----GMSPDAIHYTSI 991
Query: 270 VNIYITASHLVN 281
+N SHL N
Sbjct: 992 IN-----SHLNN 998
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 111/256 (43%), Gaps = 15/256 (5%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
A +L + A A+ELF+R +S++ +YN +M++Y G V
Sbjct: 77 APNPRMLAVMLSVLGRANQPGLAQELFDRA-ESSIGNCVQVYNSLMSVYARHGDWNSVQQ 135
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
++ ++ + PD+ T+N+ I + + + L + +G D + Y N
Sbjct: 136 LLCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLLQDVYAAGLRPDTITY----NTL 191
Query: 274 ITASHLVNAESSTLVEAEKSITQRQ------WITYDFLIILYAGLGNKDKIDQIWKSLRM 327
I+A L N S ++ E+ QRQ W TY+ +I +Y G + I++ ++
Sbjct: 192 ISACSLNNRLSDAILIFEE--MQRQGCDPDIW-TYNAMISVYGRAGRVEAASSIFRIMQE 248
Query: 328 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 387
+ Y +L ++ G ++EV I + + S +I+ N ++ + G+
Sbjct: 249 QGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITY-NTMIHMYGKAGMHR 307
Query: 388 KANEFHMLLLQKNCAP 403
KA E ++ + ++ P
Sbjct: 308 KAEELYVQMKEEGRCP 323
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/228 (17%), Positives = 96/228 (42%), Gaps = 3/228 (1%)
Query: 176 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
A L + V + L + + YN +++ ++ L+ EE++R+ PDI+TYN IS
Sbjct: 169 ASSLLQDVYAAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMIS 228
Query: 236 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 295
++ M + G + D V Y ++++ + + E + + +
Sbjct: 229 VYGRAGRVEAASSIFRIMQ-EQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCS 287
Query: 296 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 355
+ ITY+ +I +Y G K ++++ ++ + S + ++ + G + E
Sbjct: 288 SDE-ITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAA 346
Query: 356 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
+ + +S + A + ++ A++ + A + +L+ P
Sbjct: 347 MFEDMLKSQVRP-TLQAFSAMICAYAKADMFSDAEHTYSCMLRAGVRP 393
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 43/250 (17%), Positives = 109/250 (43%), Gaps = 3/250 (1%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
A + Y+ALL YA E+A + + + L NA N ++ + G+ ++++
Sbjct: 667 AGNTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNAACANYVLEAFGRAGKAKELSE 726
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
+ + + P+ T+ + + + N+++ + +M ++G S + L+ +Y
Sbjct: 727 FYQRLPEMGITPNSRTFVVIFHAFSRNGNLEEARSMYRQMR-EAGFSPSIQVFKALLALY 785
Query: 274 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
+ ++AE + + +K+ + Y+ +I LY+ LG+ K ++K ++
Sbjct: 786 SRETVEIDAE-ELVKDIKKAGLELDMDIYNHMISLYSKLGSYRKAALVFKGMQEIGCSPD 844
Query: 334 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 393
+ + ++ Y ++E ++ + ++ + +IS L+ A+ + E A
Sbjct: 845 ATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAP-NISTYTTLISAYGRLQAYEDAELVF 903
Query: 394 MLLLQKNCAP 403
+ + C P
Sbjct: 904 KSIAETGCKP 913
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 55/120 (45%), Gaps = 5/120 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY ++H+Y A KAEEL+ ++K+ +++ + ++ G V + A + E++
Sbjct: 292 TYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDM 351
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC--DSGGSDDWVKYVNLVNIYITA 276
+ V P + ++ I + A D SC +G D + Y +++++ A
Sbjct: 352 LKSQVRPTLQAFSAMICAYA---KADMFSDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKA 408
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 66/152 (43%), Gaps = 2/152 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY A++ +Y A E A +F +++ + +A+ YN ++ + G++E+V + +
Sbjct: 222 TYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMM 281
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ D TYN I + ++ +M + G D V + L++ + +
Sbjct: 282 RDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMK-EEGRCPDSVTFTVLIDT-LGKAG 339
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYA 310
VN ++ + KS + + +I YA
Sbjct: 340 FVNEAAAMFEDMLKSQVRPTLQAFSAMICAYA 371
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 24/126 (19%), Positives = 55/126 (43%), Gaps = 7/126 (5%)
Query: 128 ATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN 187
A R++ + +F I + + + TY ++LH +A E+ E + ++ +
Sbjct: 233 AGRVEAASSIFRIMQEQGF-------TPDAVTYNSVLHAFARDGRIEEVERIRGMMRDAR 285
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 247
S + + YN M+ +Y G K + ++K + PD T+ + I + +++
Sbjct: 286 CSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAA 345
Query: 248 KFLDEM 253
++M
Sbjct: 346 AMFEDM 351
>gi|449487793|ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 124/301 (41%), Gaps = 15/301 (4%)
Query: 104 YKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTAL 163
+K+ L ++++ + KEF + D+ + L +Y + YT +
Sbjct: 106 FKNRLSLNDFSLVFKEFA-ARGDWQRSLRLF----------KYMQRQIWCKPNEHIYTII 154
Query: 164 LHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNV 223
+ L EK E+F+ + + + Y ++ Y GQ E ++E +KR+ V
Sbjct: 155 ISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMKRERV 214
Query: 224 VPDIFTYNLWISSCA-ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 282
P+I TYN I++CA L+ + + EM + G D V Y L++ A
Sbjct: 215 SPNILTYNTVINACARGDLDWEGLLGLFAEMRHE-GVQPDLVTYNTLLSACAARGLGDEA 273
Query: 283 ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILS 342
E E I + TY +++ + LG +K+ + K + +Y ++
Sbjct: 274 EMVFKTMIEGGIVP-EITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIE 332
Query: 343 SYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCA 402
++ LG +KE ++ Q Q+A + S + LL + G + E + + + +
Sbjct: 333 AHAKLGSIKEAMDVFKQM-QAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAE 391
Query: 403 P 403
P
Sbjct: 392 P 392
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 116/273 (42%), Gaps = 13/273 (4%)
Query: 125 SDYATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFER 182
S Y I+ K+ I F+ + + + TY+ LL+LY + ELF +
Sbjct: 325 SSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQ 384
Query: 183 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 242
+K+S+ +A YN ++ ++ G ++V + ++ +N+ P++ TY + +C
Sbjct: 385 MKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGL 444
Query: 243 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS----HLVNAESSTLVEAEKSITQRQ 298
+ KK L M+ G Y L+ Y A+ LV + V ++ +I
Sbjct: 445 HEDAKKILFHMN-GKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTID--- 500
Query: 299 WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 358
TY+ LI +A G + + I +R ++++ I+ Y G +E +
Sbjct: 501 --TYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFV 558
Query: 359 QWKQSATSDFDISACNRLLGAFSDVGLTEKANE 391
+ ++ + D +LG + GL +++ E
Sbjct: 559 EMEK-MRCELDEQTLEGVLGVYCFAGLVDESKE 590
>gi|413917168|gb|AFW57100.1| hypothetical protein ZEAMMB73_992270 [Zea mays]
Length = 442
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 130/301 (43%), Gaps = 15/301 (4%)
Query: 91 LRHIL-KELRKSQRYKHALEISEWMV---THKEFVLSDSDYATRIDLMTKVFGIHSGERY 146
L HIL ++ Y A+ I M TH +S T ID+ + + E
Sbjct: 56 LYHILICSCKEGGNYNDAVRIYNQMPKSETHPNPRIS----CTMIDVFSTMERFADAETI 111
Query: 147 FEGLPLSAKTSE--TYTALLHLYAGAKWTEKA-EELFERVKQSNLSFNALMYNEMMTLYM 203
L SA + Y+ ++ +Y A+ + A L E KQ + + ++ +M+ Y
Sbjct: 112 LLELKASASVLDMIAYSVIVRMYIKARRLKDACSVLAEMEKQKEIIPDKYLFLDMLRTYQ 171
Query: 204 SVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW 263
G +EK+A I++ V D YN I+ C + +D++ + DEM G +
Sbjct: 172 KCGLLEKLADTYYWIRKSQVKCDEAMYNCIINCCGRAIPVDELSRIFDEM-LQQGHLANT 230
Query: 264 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 323
V + L++IY A AE ++ ++ + I+Y+ +I YA GN ++ +
Sbjct: 231 VTFNVLLDIYGKAGLFNRAEKVFIMARKQGLA--DIISYNTIIAAYAKGGNFLSMNYFVQ 288
Query: 324 SLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDV 383
++ ++ Y C+L +Y G L+E ++ + K+ A FD N ++ +
Sbjct: 289 MMQDAGFPVSLEAYNCMLDAYGKAGRLEEFASVLQKMKR-AKCKFDHYTYNIMINIYGRR 347
Query: 384 G 384
G
Sbjct: 348 G 348
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 4/122 (3%)
Query: 149 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 208
G P+S E Y +L Y A E+ + +++K++ F+ YN M+ +Y G +
Sbjct: 294 GFPVSL---EAYNCMLDAYGKAGRLEEFASVLQKMKRAKCKFDHYTYNIMINIYGRRGWI 350
Query: 209 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268
+ V+ V+ E+K + V PD+++YN I + + K + EM G S D V Y N
Sbjct: 351 QDVSNVLAELKDRGVEPDLYSYNTLIKAYGIARMPEDAVKLMQEMRV-KGISPDRVTYAN 409
Query: 269 LV 270
L+
Sbjct: 410 LI 411
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 120/303 (39%), Gaps = 53/303 (17%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLS 153
+++ L K++R K A E+ M F Y T ID + K + + +
Sbjct: 231 MVRTLLKAKRVKEAREVFGQM-EKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAK 289
Query: 154 A--KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 211
A T TY L++ A E+AEELF + S N+++Y ++ + G++++
Sbjct: 290 ACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEA 349
Query: 212 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
+ +E+ PD+ T+ + I + N +Q K +EM GG V
Sbjct: 350 CSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMM--RGGCKPNV------- 400
Query: 272 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 331
+TY +I GL KI ++ + R+ K
Sbjct: 401 ----------------------------VTYTTII---QGL---SKIGRVANAFRIMKGM 426
Query: 332 MT------SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGL 385
+ S YIC+L + LG L E +++D+ + ++S ++ + L+ D G
Sbjct: 427 IAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSP-NLQLYSSLVNGLCDGGS 485
Query: 386 TEK 388
EK
Sbjct: 486 VEK 488
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 70/354 (19%), Positives = 141/354 (39%), Gaps = 22/354 (6%)
Query: 21 RPNSDYECFFYSRFLSSGSSQNEC-LDEETSNSDGKDDLKSRIFRISLPKRS-----ATN 74
RPNS F SG + C L +E + + D+ + I +S A
Sbjct: 327 RPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAK 386
Query: 75 VIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLM 134
+ + G + V I++ L K R +A I + M+ H F S + Y +D
Sbjct: 387 SFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVT-YICLLDGF 445
Query: 135 TKVFGIHSGERYFEGLPL--SAKTSETYTALLH-LYAGAKWTEKAEELFERVKQSNLSFN 191
K+ + + + L S+ + Y++L++ L G + ++LFE+ K + + +
Sbjct: 446 CKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLD 505
Query: 192 ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS-CAATLN-IDQVKKF 249
+ ++ G++++ + + + + PD TYN+ I+ C + N +++
Sbjct: 506 PGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFAL 565
Query: 250 LDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW----ITYDFL 305
L ++ G D V Y L I + V+ L EA + R W + Y L
Sbjct: 566 LHDLE-KVGYLPDAVTYTPLC-IGLCKIGEVDRAVKMLEEA----SSRGWNADVVAYTAL 619
Query: 306 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 359
G D+ +++ + + Y CI++ + + L++ + D+
Sbjct: 620 CTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDE 673
>gi|449469490|ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 124/301 (41%), Gaps = 15/301 (4%)
Query: 104 YKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTAL 163
+K+ L ++++ + KEF + D+ + L +Y + YT +
Sbjct: 106 FKNRLSLNDFSLVFKEFA-ARGDWQRSLRLF----------KYMQRQIWCKPNEHIYTII 154
Query: 164 LHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNV 223
+ L EK E+F+ + + + Y ++ Y GQ E ++E +KR+ V
Sbjct: 155 ISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMKRERV 214
Query: 224 VPDIFTYNLWISSCA-ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 282
P+I TYN I++CA L+ + + EM + G D V Y L++ A
Sbjct: 215 SPNILTYNTVINACARGDLDWEGLLGLFAEMRHE-GVQPDLVTYNTLLSACAARGLGDEA 273
Query: 283 ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILS 342
E E I + TY +++ + LG +K+ + K + +Y ++
Sbjct: 274 EMVFKTMIEGGIVP-EITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIE 332
Query: 343 SYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCA 402
++ LG +KE ++ Q Q+A + S + LL + G + E + + + +
Sbjct: 333 AHAKLGSIKEAMDVFKQM-QAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAE 391
Query: 403 P 403
P
Sbjct: 392 P 392
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 116/273 (42%), Gaps = 13/273 (4%)
Query: 125 SDYATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFER 182
S Y I+ K+ I F+ + + + TY+ LL+LY + ELF +
Sbjct: 325 SSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQ 384
Query: 183 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 242
+K+S+ +A YN ++ ++ G ++V + ++ +N+ P++ TY + +C
Sbjct: 385 MKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGL 444
Query: 243 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS----HLVNAESSTLVEAEKSITQRQ 298
+ KK L M+ G Y L+ Y A+ LV + V ++ +I
Sbjct: 445 HEDAKKILFHMN-GKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTID--- 500
Query: 299 WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 358
TY+ LI +A G + + I +R ++++ I+ Y G +E +
Sbjct: 501 --TYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFV 558
Query: 359 QWKQSATSDFDISACNRLLGAFSDVGLTEKANE 391
+ ++ + D +LG + GL +++ E
Sbjct: 559 EMEK-MRCELDEQTLEGVLGVYCFAGLVDESKE 590
>gi|77557056|gb|ABA99852.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 726
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 132/318 (41%), Gaps = 42/318 (13%)
Query: 103 RYKHALEISEWMVTHKEFVLSDS---DYATRIDLMTKVFGIHSGERYFEGLPLSAKTSET 159
RY+HA E+ + M++ +LS++ D A R+ + G+ G F L LS
Sbjct: 122 RYRHAPEVFDEMLS----LLSNTRLHDPARRVVRLMIRRGVRRGTEQFAQLMLS------ 171
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y+ A A + +++ + + + N + + + G+V+K E ++
Sbjct: 172 -------YSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMR 224
Query: 220 RKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
R V PD++TYN I C A +D ++ + + +G D + Y Y S
Sbjct: 225 RVGVEPDVYTYNCLIKGLCGARRVVDAME--MIGVMLQNGCPPDKISY------YTVMSF 276
Query: 279 LVNAESSTLVEAEKSITQR---------QWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
L + VE + + QR +TY+ LI A G+ D+ + + +
Sbjct: 277 LCKEKR---VEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKR 333
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
++ Y I+ S+ + G + E EI+ + S D+ + ++ F +G ++A
Sbjct: 334 FRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMI-SKGCQPDVVTYSTVVDGFCRIGELDQA 392
Query: 390 NEFHMLLLQKNCAPTNAS 407
+ + + +C P +
Sbjct: 393 RKMMKHMYKNDCKPNTVT 410
>gi|297839237|ref|XP_002887500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333341|gb|EFH63759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 989
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 104/239 (43%), Gaps = 12/239 (5%)
Query: 156 TSETYTALLHLYA-GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
+S T A++ +YA W E + + + + L YN M+ Y EK +
Sbjct: 475 SSTTLAAVMDVYAEKGLWVEAETVFYGKRNMTGQRNDVLEYNVMIKAYGKAKLHEKALSI 534
Query: 215 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274
+ +K + PD TYN I A +D ++ L EM DSG Y L+ Y+
Sbjct: 535 FKGMKNQGTWPDECTYNSLIQMLAGVDLVDDAQRILAEM-LDSGCKPGCKTYAALIASYV 593
Query: 275 TASHLVNAESSTLVEA-EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
L +A L EA +K+ + + Y LI G +++ + ++ ++
Sbjct: 594 RLGLLSDA--VDLYEAMKKTGVKPNEVVYGSLI---NGFAESGMVEEAIQYFKLMEEHGV 648
Query: 334 SRNYICILS---SYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
N+I + S +Y +G L+E + D+ K S D++A N +L +D+G+ +A
Sbjct: 649 QSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSGGGP-DVAASNSMLSLCADLGIVSEA 706
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 49/99 (49%)
Query: 151 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 210
P + + T+ L+ LY A A LF + +S + + + +N M+ + G + +
Sbjct: 296 PRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSE 355
Query: 211 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 249
++++++ K + PD TYN+ +S A +I+ K+
Sbjct: 356 AESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALKY 394
Score = 37.7 bits (86), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 22/115 (19%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
Y +L++ +A + E+A + F+ +++ + N ++ ++ Y VG +E+ V +++
Sbjct: 619 VYGSLINGFAESGMVEEAIQYFKLMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKM 678
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
K PD+ N +S CA + + + +++ G+ D + + ++ +Y
Sbjct: 679 KDSGGGPDVAASNSMLSLCADLGIVSEAESIFNDLR--EKGTCDVISFATMMYLY 731
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 115/268 (42%), Gaps = 27/268 (10%)
Query: 75 VIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEF----VLSDSD---Y 127
++++ V Q V ++ + K +R ALE+ E M KE V + D Y
Sbjct: 327 LMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIY 386
Query: 128 ATRIDLMTKVFGIHSGERYFEGLPL---------SAKTSETYTALLHLYAGAKWTEKAEE 178
T ID + KV R EGL L A + TY L+ + A EK +E
Sbjct: 387 NTLIDGLCKV------GRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKE 440
Query: 179 LFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCA 238
LF+ + + ++ N + N ++ G+V E +R+ + D TY I++
Sbjct: 441 LFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFC 500
Query: 239 ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQ 298
N ++ + +EM SG S D + Y L++ + A + +A S L E +K +
Sbjct: 501 NVNNFEKAMELFNEM-LKSGCSPDAIVYYTLISGFSQAGRMADA-SFVLAELKKLGIRPD 558
Query: 299 WITYDFLIILYAGLGNKDKIDQIWKSLR 326
+ Y+ LI G +K ++++ L+
Sbjct: 559 TVCYNTLI---GGFCRTNKFHRVFEMLK 583
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 110/246 (44%), Gaps = 4/246 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYTAL++ + EKA ELF + +S S +A++Y +++ + G++ + V+ E+
Sbjct: 491 TYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAEL 550
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K+ + PD YN I T +V + L EM ++G D + Y L+ Y + +
Sbjct: 551 KKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEME-EAGLKPDTITYNTLI-AYASKNG 608
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR-MTKQKMTSRNY 337
+ + + K+ TY +I Y GN ++ +I+K ++ +K + Y
Sbjct: 609 DLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIY 668
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 397
+++S +K +++ K + + + N + D EK EF ++
Sbjct: 669 NILINSLCKNNKVKSAVSLMEDMKIWGVTP-NTTTYNAIFKGLRDEKDLEKVFEFMDRMI 727
Query: 398 QKNCAP 403
+ C P
Sbjct: 728 EHACNP 733
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 88/204 (43%), Gaps = 10/204 (4%)
Query: 191 NALMYNEMMTLYMSVG-QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 249
+ ++YN ++ VG Q E + L+ +K PD TYN I I++ K+
Sbjct: 382 DVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKEL 441
Query: 250 LDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILY 309
DEM + G V VN + + + V++ + VEA++ + +TY LI +
Sbjct: 442 FDEM--NKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAF 499
Query: 310 AGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD 369
+ N +K +++ + + + Y ++S + G + + ++ + K+ D
Sbjct: 500 CNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRP-D 558
Query: 370 ISACNRLLGAFSDVGLTEKANEFH 393
N L+G F + N+FH
Sbjct: 559 TVCYNTLIGGFC------RTNKFH 576
>gi|302753376|ref|XP_002960112.1| hypothetical protein SELMODRAFT_402120 [Selaginella moellendorffii]
gi|300171051|gb|EFJ37651.1| hypothetical protein SELMODRAFT_402120 [Selaginella moellendorffii]
Length = 677
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 148/353 (41%), Gaps = 48/353 (13%)
Query: 47 EETSNSDGKDDLKSRIFRISLPKRSATNVIQR---WVSEGNQATVSELRHILKELRKSQR 103
E+ S +D ++ K + +SL ++ ++R W ++GN T + +++ L +R
Sbjct: 51 EDESGNDPEEGKKEKGSLVSLCLKTPDLSVRRIEAWAAQGNTVTQGNISEVIEALCVQKR 110
Query: 104 YKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTS-ETYTA 162
+ AL + E+ +FV S D + + T+ G +G++ LP +++ E A
Sbjct: 111 FLAALRVMEFARQRTDFVFSLEDAKQEVTIATRKLGSFAGQKKINSLPEKFRSNEEVVAA 170
Query: 163 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 222
L KA L + +K + + +Y+ M+++Y + EK+ + ++K
Sbjct: 171 YLRALTRINAASKALSLIKDLKPTTPA----LYSSMISVYAFLAMHEKMLALYTDMKELG 226
Query: 223 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 282
V P TL I V L + GG L I A +
Sbjct: 227 VKP--------------TLEI--VMLMLLKYHKRVGG---------LPGIEEEARAALEE 261
Query: 283 ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILS 342
E + ++++ +Y LG++DK++ IW +R + T RN C S
Sbjct: 262 IDPRAAEP---------LIRNYMLEMYGYLGDRDKVENIWSIIR-AQPGGTFRN--CYFS 309
Query: 343 SYLMLGHLKEVGEIIDQWKQSATSDFDISACN---RLLGAFSDVGLTEKANEF 392
+ L G+L++V + ++S I N ++L ++ +G+ +KA +
Sbjct: 310 AMLAFGYLRDVDRAEELLRESVEVVKVIPGRNQYFKMLDVYAKMGMMDKAEKL 362
>gi|125580078|gb|EAZ21224.1| hypothetical protein OsJ_36877 [Oryza sativa Japonica Group]
Length = 726
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 132/318 (41%), Gaps = 42/318 (13%)
Query: 103 RYKHALEISEWMVTHKEFVLSDS---DYATRIDLMTKVFGIHSGERYFEGLPLSAKTSET 159
RY+HA E+ + M++ +LS++ D A R+ + G+ G F L LS
Sbjct: 122 RYRHAPEVFDEMLS----LLSNTRLHDPARRVVRLMIRRGVRRGTEQFAQLMLS------ 171
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y+ A A + +++ + + + N + + + G+V+K E ++
Sbjct: 172 -------YSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMR 224
Query: 220 RKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
R V PD++TYN I C A +D ++ + + +G D + Y Y S
Sbjct: 225 RVGVEPDVYTYNCLIKGLCGARRVVDAME--MIGVMLQNGCPPDKISY------YTVMSF 276
Query: 279 LVNAESSTLVEAEKSITQR---------QWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
L + VE + + QR +TY+ LI A G+ D+ + + +
Sbjct: 277 LCKEKR---VEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKR 333
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
++ Y I+ S+ + G + E EI+ + S D+ + ++ F +G ++A
Sbjct: 334 FRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMI-SKGCQPDVVTYSTVVDGFCRIGELDQA 392
Query: 390 NEFHMLLLQKNCAPTNAS 407
+ + + +C P +
Sbjct: 393 RKMMKHMYKNDCKPNTVT 410
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 103/249 (41%), Gaps = 3/249 (1%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
T YT L+ G +AE +F ++ S + N YN MM Y + V+K +
Sbjct: 226 PTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALEL 285
Query: 215 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274
+E+ ++P++ T+ + I T + +KFL +M+ G + Y L++ Y
Sbjct: 286 YQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMA-SFGVVPNIFVYNCLIDGYC 344
Query: 275 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 334
A +L A S E EK TY LI G+ ++ D + + ++ +
Sbjct: 345 KAGNLSEALSLH-SEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNA 403
Query: 335 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 394
Y ++ Y G++++ E+ Q + +I + L+ + G E A +
Sbjct: 404 VTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEP-NIITFSTLIDGYCKAGKMEAAMGLYT 462
Query: 395 LLLQKNCAP 403
++ K P
Sbjct: 463 EMVIKGLLP 471
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY+ L+ G E+A+ L + +K+ NA+ YN ++ Y G +EK V ++
Sbjct: 370 TYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQM 429
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
K + P+I T++ I ++ EM G D V Y L++
Sbjct: 430 TEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVI-KGLLPDVVAYTALID 481
>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
Length = 796
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 58/114 (50%), Gaps = 1/114 (0%)
Query: 162 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 221
A++ +Y K +K EE+ +K+++++ +A YN +M +Y +G EK ++ EIK
Sbjct: 611 AMVSIYGKNKMVKKVEEVLTLMKENSINHSAATYNSLMHMYSRLGDCEKCEAILTEIKSS 670
Query: 222 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275
+ PD ++YN I + + + + EM C SG D V Y + Y+
Sbjct: 671 GMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKC-SGVKPDIVTYNIFIKSYVA 723
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 114/253 (45%), Gaps = 11/253 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+ +LL +Y A+ E+A + ++++ + + + + YN +++ Y+ G +E+ + +E+
Sbjct: 293 TFNSLLDVYGKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEM 352
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + + PD+ TY IS ID EM +G S + Y L+ + H
Sbjct: 353 EFRGMKPDVVTYTTLISGLDRIGKIDAALATYSEM-VRNGCSPNLCTYNALIKM-----H 406
Query: 279 LVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 334
V + + ++ + + +T++ L+ ++ G ++ ++K ++
Sbjct: 407 GVRGKFTEMMIVFDDLRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPER 466
Query: 335 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 394
Y+ ++SSY G + EI + ++ DIS N +L A + G +A +
Sbjct: 467 DTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYP-DISTYNAVLSALARGGRWVQAEKLFA 525
Query: 395 LLLQKNCAPTNAS 407
+ ++C P S
Sbjct: 526 EMEDRDCKPDELS 538
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 9/133 (6%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
++ TY +L+H+Y+ EK E + +K S + + YN ++ Y GQ+++ + +
Sbjct: 640 SAATYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLF 699
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATL----NIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
E+K V PDI TYN++I S A L ID V+ + + G + Y +++
Sbjct: 700 SEMKCSGVKPDIVTYNIFIKSYVANLMFEEAIDLVRYLVAQ-----GCKPNERTYNSILE 754
Query: 272 IYITASHLVNAES 284
Y +V A+S
Sbjct: 755 GYCRHGRMVEAKS 767
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 111/247 (44%), Gaps = 7/247 (2%)
Query: 159 TYTALLHLYA-GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
TY A+L A G +W + AE+LF ++ + + L Y+ ++ Y + +++K+ + E+
Sbjct: 503 TYNAVLSALARGGRWVQ-AEKLFAEMEDRDCKPDELSYSSLLHAYANAKKLDKMKALSED 561
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN-LVNIYITA 276
I + + P + + ++ + +K E+ D + +N +V+IY
Sbjct: 562 IYAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRRRCSLD--INVLNAMVSIYGKN 619
Query: 277 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 336
+ E + E SI TY+ L+ +Y+ LG+ +K + I ++ + + +
Sbjct: 620 KMVKKVEEVLTLMKENSINH-SAATYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYS 678
Query: 337 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 396
Y ++ +Y G +KE + + K S DI N + ++ + E+A + L
Sbjct: 679 YNTVIYAYGRKGQMKEASRLFSEMKCSGVKP-DIVTYNIFIKSYVANLMFEEAIDLVRYL 737
Query: 397 LQKNCAP 403
+ + C P
Sbjct: 738 VAQGCKP 744
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 5/200 (2%)
Query: 153 SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY--MSVGQVEK 210
A + YTAL+ ++ A A +F R+ + + YN ++ +Y MSV E
Sbjct: 181 PAPDASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKE- 239
Query: 211 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 270
V ++V+ +K + D +TYN IS C + + DEM +G D V + +L+
Sbjct: 240 VVVLVDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKA-AGFEPDKVTFNSLL 298
Query: 271 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 330
++Y A A L + E + +TY+ LI Y G ++ ++ + +
Sbjct: 299 DVYGKARRHEEA-IGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGM 357
Query: 331 KMTSRNYICILSSYLMLGHL 350
K Y ++S +G +
Sbjct: 358 KPDVVTYTTLISGLDRIGKI 377
>gi|224076660|ref|XP_002304977.1| predicted protein [Populus trichocarpa]
gi|222847941|gb|EEE85488.1| predicted protein [Populus trichocarpa]
Length = 381
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 111/252 (44%), Gaps = 12/252 (4%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQ----SNLSFNALMYNEMMTLYMSVGQVEKVA 212
S Y + A AK EE+ E KQ S FNA +++LY S G +
Sbjct: 59 SAIYKDTIRRLAAAKKFRYVEEILENQKQYQDMSKEGFNA----RLISLYGSSGMFDNAR 114
Query: 213 LVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 272
V +E+ + + ++N + +C + D+V +S + D V Y ++
Sbjct: 115 KVFDEMLERKCARTVLSFNALLGACVNSKKFDEVGGLFRGLSEELEIEPDLVSYNTVMKA 174
Query: 273 YITASHLVNAESSTLVEAEKSITQRQWITYDFLI-ILYAGLGNKDKIDQIWKSLRMTKQK 331
+ L +A S L E EK + IT++ L+ LYA G D ++IW+ ++ K
Sbjct: 175 FCEMGSLDSA-VSLLDEIEKKGLKPDLITFNTLLNGLYAN-GRFDAGERIWQRMKEKNVK 232
Query: 332 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 391
R+Y L + +K+ +++++ K +FDI + N L+ F + G E+A
Sbjct: 233 PDGRSYNEKLLGLALEKRMKDATKVVEEMKSEGI-EFDIFSYNALIRGFVNEGDLEEAKG 291
Query: 392 FHMLLLQKNCAP 403
++ + + + P
Sbjct: 292 WYGEIRKSDIKP 303
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 7/204 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
YT L+ A A+ E+A EL ++++ ++ ++ GQV +V+E+
Sbjct: 47 AYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEV 106
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K + PDI YN+ I N+D KF E+ DD V Y +++ + A
Sbjct: 107 KGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDD-VSYTSMIWVLCKAGR 165
Query: 279 LVNAES-STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
L AE +EAE+S+ Y+ +I+ G G+ + + +K L +++ +
Sbjct: 166 LGEAEELFAQMEAERSVP--CAYAYNTMIM---GYGSAGRFEDAYKLLERLRERGCIPSV 220
Query: 338 ICILSSYLMLGHLKEVGEIIDQWK 361
+ S LG ++V E + ++
Sbjct: 221 VSFNSILTCLGKKRKVDEALSLFE 244
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 90/205 (43%), Gaps = 27/205 (13%)
Query: 56 DDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMV 115
+D++S F LP + +++ +++ QA R++ HA++
Sbjct: 418 EDIRSYGF---LPDVRSYSILIHGLTKAGQA------------RETSNIFHAMK------ 456
Query: 116 THKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLP--LSAKTSETYTALLHLYAGAKWT 173
+ F L Y +D K +H E + T TY A++ A
Sbjct: 457 -QQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRL 515
Query: 174 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 233
++A LFE K + N ++Y+ ++ + VG++++ L++EE+ +K + P+++T+N
Sbjct: 516 DEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSL 575
Query: 234 ISSCAATLNIDQVK---KFLDEMSC 255
+ + I++ + + EM C
Sbjct: 576 LDALVKAEEINEALVCFQSMKEMKC 600
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 55/126 (43%), Gaps = 2/126 (1%)
Query: 129 TRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQS 186
T +D + K + G FE + + +Y+ L+H A + +F +KQ
Sbjct: 399 TYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQ 458
Query: 187 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 246
+ +A YN ++ + G+V K ++EE+K K V P + TY + A +D+
Sbjct: 459 GFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEA 518
Query: 247 KKFLDE 252
+E
Sbjct: 519 YMLFEE 524
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 93/233 (39%), Gaps = 41/233 (17%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 184
Y ID K + ++F L + +YT+++ + A +AEELF +++
Sbjct: 118 YNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQME 177
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
A YN M+ Y S G+ E ++E ++ + +P + ++N ++ +D
Sbjct: 178 AERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVD 237
Query: 245 QVKKFLD-----------------EMSCDSGGSDDWVK----------YVNLVNIYITAS 277
+ + +M C G ++ + + NL+ + I
Sbjct: 238 EALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVD 297
Query: 278 HLVNAESSTLVEAEK---SITQR----QWITYDFLIILYAGLGNKDKIDQIWK 323
L A L EA K S +QR +TY LI GLG K ++D+ ++
Sbjct: 298 RLCKARK--LEEAYKIFESASQRGCNPDCVTYCSLI---DGLGKKGQVDEAYR 345
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 99/255 (38%), Gaps = 11/255 (4%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
S TY ++ + E+A + + ++ ++L N L N M+ ++E+ + E
Sbjct: 254 SSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFE 313
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
++ PD TY I +D+ + ++M D+G + + V Y +L+
Sbjct: 314 SASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKM-LDAGHNANPVVYTSLIR----- 367
Query: 277 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL----GNKDKIDQIWKSLRMTKQKM 332
+ ++ + K + +R L+ Y G +K I++ +R
Sbjct: 368 NFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLP 427
Query: 333 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
R+Y ++ G +E I KQ + D A N ++ F G KA E
Sbjct: 428 DVRSYSILIHGLTKAGQARETSNIFHAMKQQGFA-LDARAYNAVVDGFCKSGKVHKAYEI 486
Query: 393 HMLLLQKNCAPTNAS 407
+ +K PT A+
Sbjct: 487 LEEMKEKCVQPTVAT 501
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 46/238 (19%), Positives = 95/238 (39%), Gaps = 10/238 (4%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 184
Y + ID + K + R FE + + + YT+L+ + E ++F+ +
Sbjct: 327 YCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELI 386
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
+ + + N M G+VEK ++ E+I+ +PD+ +Y++ I
Sbjct: 387 RRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQAR 446
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 304
+ M G + D Y +V+ + + V+ L E ++ Q TY
Sbjct: 447 ETSNIFHAMK-QQGFALDARAYNAVVDGFCKSGK-VHKAYEILEEMKEKCVQPTVATYGA 504
Query: 305 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQ 359
++ GL D++D+ + K K N Y ++ + +G + E I+++
Sbjct: 505 IV---DGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEE 559
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 87/221 (39%), Gaps = 4/221 (1%)
Query: 85 QATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGE 144
Q TV+ I+ L K R A + E K L+ Y++ ID KV I
Sbjct: 496 QPTVATYGAIVDGLAKIDRLDEAYMLFEE-AKSKGIELNVVLYSSLIDGFGKVGRIDEAY 554
Query: 145 RYFEGLPLSAKTSETYT--ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY 202
E + T YT +LL A+ +A F+ +K+ N Y+ ++
Sbjct: 555 LILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGL 614
Query: 203 MSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 262
V + K + ++++++ +VP++ TY IS A NI + + GG D
Sbjct: 615 CRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKAN-GGIPD 673
Query: 263 WVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 303
+ L+ A+ + A +T+ + S ++ D
Sbjct: 674 AASFNALIEGMSNANRAMEAYQTTVYQLSSSSCSWNFLVPD 714
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 5/173 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L++ A ++A F+ + + L+ N YN +M + VGQ++ + E+
Sbjct: 137 TYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEM 196
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
KR+ P + TYN+ + + + + +K +M+ D G S D Y LVN + S
Sbjct: 197 KRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGD-GCSPDSYTYSTLVN-GLGKSG 254
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 331
V E + Y+ L+ A GN +D++WK ++ +K
Sbjct: 255 RVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGN---MDRVWKLMKEMSRK 304
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/288 (18%), Positives = 109/288 (37%), Gaps = 44/288 (15%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
+ T +T L+ + + E+AE +++++ Q + YN ++ + GQ++
Sbjct: 62 SPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAME 121
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
+ E+K K PD +TY +++ + + + F D M + G + + Y L++ +
Sbjct: 122 MFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAM-LERGLTPNIPTYNLLMDAF 180
Query: 274 ITASHLVNAESSTLVEAEKSITQRQWITYDFLI--------------------------- 306
L + E ++ Q +TY+ L+
Sbjct: 181 RKVGQL-DMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPD 239
Query: 307 -----ILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY-LMLGHLKEVGEIIDQW 360
L GLG ++++ K R +M R L +Y +L L + G + W
Sbjct: 240 SYTYSTLVNGLGKSGRVEEAHKVFR----EMVDRGVAVDLVNYNSLLATLAKAGNMDRVW 295
Query: 361 ---KQSATSDF--DISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
K+ + F D + N ++ A + A E +++ C P
Sbjct: 296 KLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKP 343
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 67/146 (45%), Gaps = 8/146 (5%)
Query: 128 ATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN 187
A R+ K+F +G+ + S TY+ L++ + E+A ++F +
Sbjct: 218 AGRVGAARKLFHKMTGDG-------CSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRG 270
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 247
++ + + YN ++ G +++V +++E+ RK PD F++N + + D +
Sbjct: 271 VAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAR 330
Query: 248 KFLDEMSCDSGGSDDWVKYVNLVNIY 273
+ M +SG D + Y L++ Y
Sbjct: 331 EVFARM-VESGCKPDLISYNILIDSY 355
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
++TY +L+H A ++A + E ++ + + + YN +M + G+ ++ A + +
Sbjct: 380 TKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQ 439
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
++K K V PD +Y + I A +D+ +M G D Y I I A
Sbjct: 440 QMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKA-VGCPVDKAMY----RILIRA 494
Query: 277 SH 278
+H
Sbjct: 495 AH 496
>gi|326504498|dbj|BAJ91081.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 793
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 112/253 (44%), Gaps = 11/253 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+ +LL +Y A+ ++A + + ++ + + YN +++ Y+ G +++ A + EE+
Sbjct: 286 TFNSLLDVYGKARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEM 345
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ K + PD+ TY IS ID DEM +G + Y L+ + H
Sbjct: 346 EVKGIQPDVITYTTLISGLDRAGKIDAAIGTYDEM-LRNGCKPNLCTYNALIKL-----H 399
Query: 279 LVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 334
V + ++ + + +T++ L+ ++ G ++ ++K ++ +
Sbjct: 400 GVRGKFPEMMAVFDDLRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPER 459
Query: 335 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 394
Y+ ++SSY G + EI + ++ DIS N +L A + G E+A +
Sbjct: 460 DTYVSLISSYSRCGLFDQSMEIYKRMIEAGIYP-DISTYNAVLSALARGGRWEQAEKLFA 518
Query: 395 LLLQKNCAPTNAS 407
+ +C P S
Sbjct: 519 EMENLDCRPDELS 531
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 47/84 (55%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
++ TY +L+H+Y+ EK E + +K S + YN M+ Y GQ+++ + +
Sbjct: 633 STATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEASRLF 692
Query: 216 EEIKRKNVVPDIFTYNLWISSCAA 239
E+K ++PDI TYN+++ S A
Sbjct: 693 SEMKSSGLIPDIVTYNIFVKSYVA 716
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Query: 162 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 221
A++ +Y + +K EE+ +K S+++ + YN +M +Y +G EK ++ EIK
Sbjct: 604 AMVSVYGKNRMVKKVEEILSLMKGSSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSS 663
Query: 222 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
PD ++YN I + + + + EM SG D V Y V Y+ S
Sbjct: 664 GARPDRYSYNTMIYAYGRKGQMKEASRLFSEMK-SSGLIPDIVTYNIFVKSYVANS 718
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 3/158 (1%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK-VALVV 215
+ YTAL+ ++ A A +F R+ + + + YN ++ +Y + K V +V
Sbjct: 178 ASAYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVVALV 237
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275
+ +K + D +TYN IS C + K DEM +G D V + +L+++Y
Sbjct: 238 DSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRA-AGFEPDKVTFNSLLDVYGK 296
Query: 276 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 313
A + + L E E +TY+ LI Y G
Sbjct: 297 A-RMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDG 333
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 110/249 (44%), Gaps = 11/249 (4%)
Query: 159 TYTALLHLYA-GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
TY A+L A G +W E+AE+LF ++ + + L Y+ ++ Y + +++K+ + E+
Sbjct: 496 TYNAVLSALARGGRW-EQAEKLFAEMENLDCRPDELSYSSLLHAYANAKKLDKMKALSED 554
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA- 276
I + + + + N+ + +K E+ D +N++N ++
Sbjct: 555 IYAEKIESHHGLVKTLVLVNSKVNNLSETEKAFLELGRRRCSLD-----INVLNAMVSVY 609
Query: 277 --SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 334
+ +V L + S TY+ L+ +Y+ LG+ +K + I ++ + +
Sbjct: 610 GKNRMVKKVEEILSLMKGSSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDR 669
Query: 335 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 394
+Y ++ +Y G +KE + + K S DI N + ++ + E+A +
Sbjct: 670 YSYNTMIYAYGRKGQMKEASRLFSEMKSSGLIP-DIVTYNIFVKSYVANSMFEEAIDLVR 728
Query: 395 LLLQKNCAP 403
++ + C P
Sbjct: 729 YMVTRGCKP 737
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 111/259 (42%), Gaps = 12/259 (4%)
Query: 148 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 207
+G+PL TY L+ ++A ++F+ ++ + + + +N ++ +Y
Sbjct: 243 DGIPLD---RYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYGKARM 299
Query: 208 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 267
++ V++E++ P + TYN ISS + + + +EM G D + Y
Sbjct: 300 HDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEV-KGIQPDVITYT 358
Query: 268 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 327
L++ A ++A T E ++ + TY+ LI L+ G ++ ++ LR
Sbjct: 359 TLISGLDRAGK-IDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRS 417
Query: 328 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA---TSDFDISACNRLLGAFSDVG 384
+ +L+ + G EV + + K+S D +S L+ ++S G
Sbjct: 418 AGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVS----LISSYSRCG 473
Query: 385 LTEKANEFHMLLLQKNCAP 403
L +++ E + +++ P
Sbjct: 474 LFDQSMEIYKRMIEAGIYP 492
>gi|147778634|emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
Length = 1494
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 139/324 (42%), Gaps = 9/324 (2%)
Query: 85 QATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFG-IHSG 143
Q T ++ ++K + +S ++ ALE+ EW+ + + AT + ++ K +
Sbjct: 182 QMTPTDFCFVVKWVGQSS-WQRALEVYEWLNLRHWYSPNARMLATILSVLGKANQEALAV 240
Query: 144 ERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM 203
E + T + Y A++ +YA K +EL + ++ + + +N ++ +
Sbjct: 241 EIFARAEAAXGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARL 300
Query: 204 SVG-QVEKVAL-VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD 261
G V +A+ ++ E++R + PDI TYN IS+C+ N+++ K ++M D
Sbjct: 301 KSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPD 360
Query: 262 DWVKYVNLVNIYITASHLVNAESSTLV-EAEKSITQRQWITYDFLIILYAGLGNKDKIDQ 320
W Y ++++Y ++ E+ L + E +TY+ L+ +A GN DK+ +
Sbjct: 361 LWT-YNAMISVYGRCG--MSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKE 417
Query: 321 IWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAF 380
I + + Y I+ Y G ++ K S S D L+ +
Sbjct: 418 ICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSP-DAVTYTVLIDSL 476
Query: 381 SDVGLTEKANEFHMLLLQKNCAPT 404
+ ++A E +L PT
Sbjct: 477 GKANMIKEAAEVMSEMLNAXVKPT 500
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/215 (17%), Positives = 101/215 (46%), Gaps = 3/215 (1%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
+ ++L LY G +K ++++ ++++ L + YN ++ +Y + E+ ++ E++
Sbjct: 957 WNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMR 1016
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
R + P + TY IS+ ++Q ++ + + D ++ ++ ++ + +
Sbjct: 1017 RVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHI-MMKMFRNSGNH 1075
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 339
AE V E + + T L++ Y+G G ++ +++ +L++ +++ Y
Sbjct: 1076 SKAEKLLGVMKEAGV-EPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSS 1134
Query: 340 ILSSYLMLG-HLKEVGEIIDQWKQSATSDFDISAC 373
++ +YL G H + ++++ K D I C
Sbjct: 1135 VIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTC 1169
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 47/244 (19%), Positives = 105/244 (43%), Gaps = 3/244 (1%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
+ + AL+H YA + E+A +F + + S N +M + G+++++ +V++E
Sbjct: 815 KVWNALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQE 874
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
++ + L + + A NI +VKK M +G Y ++ +
Sbjct: 875 LQDMGFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKA-AGYFPTMHLYRIMIGLLAKGK 933
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
+ + E + + E E + + ++ ++ LY G+G+ K Q+++ ++ K Y
Sbjct: 934 RVRDVE-AMVSEMEVAXFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTY 992
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 397
++ Y +E ++ + ++ + L+ AF + + E+A E LL
Sbjct: 993 NTLILMYCRDRRPEEGLSLMHEMRRVGLEP-KLDTYKSLISAFGKLQMVEQAEELFEGLL 1051
Query: 398 QKNC 401
K C
Sbjct: 1052 SKEC 1055
Score = 44.7 bits (104), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
+TY +L+ + + E+AEELFE + + Y+ MM ++ + G K ++
Sbjct: 1025 DTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGV 1084
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274
+K V P I T +L + S + + ++ +K LD + + G + Y ++++ Y+
Sbjct: 1085 MKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVE-GLPLSTLPYSSVIDAYL 1140
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 37/209 (17%), Positives = 82/209 (39%), Gaps = 38/209 (18%)
Query: 195 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 254
YN M+++Y G + + ++++ K +PD TYN + + A N+D+VK+ ++M
Sbjct: 364 YNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMV 423
Query: 255 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 314
G D+ +TY+ +I +Y G
Sbjct: 424 KMGFGKDE-------------------------------------MTYNTIIHMYGKRGQ 446
Query: 315 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 374
D Q++ ++++ + + Y ++ S +KE E++ + + + +
Sbjct: 447 HDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNAXVKP-TLRTFS 505
Query: 375 RLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
L+ ++ G +A E +L+ P
Sbjct: 506 ALICGYAKAGKRVEAEETFDCMLRSGIKP 534
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 112/273 (41%), Gaps = 37/273 (13%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT+++ +K E+A +LF+ ++Q ++ N +MY ++ Y G+V++ L++E++
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Query: 219 KRKNVVPDIFTYNLWISS-CA--------------------ATLNIDQ--VKKFLDEMSC 255
KN +P+ T+N I CA T++ D + + L +
Sbjct: 559 LSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDF 618
Query: 256 D-----------SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 304
D SG D Y + Y L++AE E ++ TY
Sbjct: 619 DHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSP-DLFTYSS 677
Query: 305 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
LI Y LG + + K +R T + + ++ ++ L + + K+ G + S
Sbjct: 678 LIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSN 737
Query: 365 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 397
+FD LL + +T A + L+L
Sbjct: 738 MMEFDTVV--ELLEKMVEHSVTPNAKSYEKLIL 768
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 96/244 (39%), Gaps = 3/244 (1%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y LL+ A ++ ++++ + + + N YN+M+ Y +G VE+ V +I
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
+ PD FTY I ++D K +EM G + V Y +L++ A
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPL-KGCRRNEVAYTHLIHGLCVARR- 303
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 339
++ V+ + TY LI G K + + K + T K Y
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363
Query: 340 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 399
++ S ++ E++ Q + ++ N L+ + G+ E A + L+ +
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMP-NVITYNALINGYCKRGMIEDAVDVVELMESR 422
Query: 400 NCAP 403
+P
Sbjct: 423 KLSP 426
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 99/248 (39%), Gaps = 45/248 (18%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT L+ EKA EL ++ + L N + YN ++ Y G +E VVE +
Sbjct: 360 TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM 419
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + + P+ TYN I + N+ + L++M + D V Y +L++ + +
Sbjct: 420 ESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKM-LERKVLPDVVTYNSLIDGQCRSGN 477
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+A + ++ + QW TY + ID + KS R
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQW-TYTSM------------IDSLCKSKR------------ 512
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL-- 396
++E ++ D +Q + ++ L+ + G K +E H++L
Sbjct: 513 -----------VEEACDLFDSLEQKGVNP-NVVMYTALIDGYCKAG---KVDEAHLMLEK 557
Query: 397 -LQKNCAP 403
L KNC P
Sbjct: 558 MLSKNCLP 565
>gi|224097576|ref|XP_002310993.1| predicted protein [Populus trichocarpa]
gi|222850813|gb|EEE88360.1| predicted protein [Populus trichocarpa]
Length = 877
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 114/292 (39%), Gaps = 56/292 (19%)
Query: 118 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTE- 174
+EF L YA R D+ H + FE + + +S YT+L+H YA + E
Sbjct: 303 REFGLMVGYYARRGDM-------HRARQTFESMRVRGIYPSSHVYTSLIHAYAVGRDMEE 355
Query: 175 ----------------------------------------KAEELFERVKQSNLSFNALM 194
+AE L +++ + +
Sbjct: 356 ALSCVRKMKEEGVEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLVREMEEEGIDAPIDI 415
Query: 195 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD--E 252
Y+ MM Y +G EK +V + +K P + +Y I+ + +V K L+ +
Sbjct: 416 YHTMMNGYTMIGNEEKCLIVFKRLKECGFAPSVISYGCLIN---MYTKMGKVSKALEVSK 472
Query: 253 MSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL 312
M +G + Y L+N ++ NA + + K + + Y+ +I + G+
Sbjct: 473 MMESAGIKHNMKTYSMLINGFLKLKDWTNA-FTVFEDVIKDGLKPDVVLYNNIIKAFCGM 531
Query: 313 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
GN D+ + K ++ + + TSR ++ I+ + G ++ EI D ++S
Sbjct: 532 GNMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSG 583
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 82/187 (43%), Gaps = 2/187 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT +++ YA T KA E F +++ L + Y ++ G+++ V E+
Sbjct: 625 TYTTIMNGYAALGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTREM 684
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+N+ + F YN+ I A ++ + + +M G D Y + +N A
Sbjct: 685 SAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMK-QEGVQPDIHTYTSFINACCKAGD 743
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
++ A + T+ E E + TY LI +A +K + ++ +++ K Y
Sbjct: 744 MLRA-TKTIQEMEALGVKPNVKTYTTLIHGWACASLPEKALRCFEEMKLAGLKPDKAVYH 802
Query: 339 CILSSYL 345
C+++S L
Sbjct: 803 CLMTSLL 809
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 83/175 (47%), Gaps = 8/175 (4%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
TS T+ ++H +A A +A E+F+ +++S +N ++ + Q+EK ++
Sbjct: 552 TSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEIL 611
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275
+E+ V PD TY ++ AA + + ++ ++ + G D Y L+
Sbjct: 612 DEMALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLR-NEGLELDVFTYEALLKACCK 670
Query: 276 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 330
+ + +A + T + ++I + ++ Y+ LI +A G+ +W++ + +Q
Sbjct: 671 SGRMQSALAVTREMSAQNIPRNTFV-YNILIDGWARRGD------VWEAADLMQQ 718
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 103/249 (41%), Gaps = 3/249 (1%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
T YT L+ G +AE +F ++ S + N YN MM Y + V+K +
Sbjct: 226 PTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALEL 285
Query: 215 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274
+E+ ++P++ T+ + I T + +KFL +M+ G + Y L++ Y
Sbjct: 286 YQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMA-SFGVVPNIFVYNCLIDGYC 344
Query: 275 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 334
A +L A S E EK TY LI G+ ++ D + + ++ +
Sbjct: 345 KAGNLSEA-LSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNA 403
Query: 335 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 394
Y ++ Y G++++ E+ Q + +I + L+ + G E A +
Sbjct: 404 VTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEP-NIITFSTLIDGYCKAGKMEAAMGLYT 462
Query: 395 LLLQKNCAP 403
++ K P
Sbjct: 463 EMVIKGLLP 471
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 5/138 (3%)
Query: 134 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 193
+++ +HS E LP TY+ L+ G E+A+ L + +K+ NA+
Sbjct: 349 LSEALSLHSEIEKHEILP----DVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAV 404
Query: 194 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
YN ++ Y G +EK V ++ K + P+I T++ I ++ EM
Sbjct: 405 TYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEM 464
Query: 254 SCDSGGSDDWVKYVNLVN 271
G D V Y L++
Sbjct: 465 VI-KGLLPDVVAYTALID 481
>gi|334188265|ref|NP_199684.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635750|sp|Q9FKC3.2|PP424_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g48730, chloroplastic; Flags: Precursor
gi|332008334|gb|AED95717.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 508
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 101/228 (44%), Gaps = 7/228 (3%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y L+ + K EKA ELF+ + N +Y +++ Y G+ + ++E +K
Sbjct: 153 YVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMK 212
Query: 220 RK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
N PD+ TY++ I S D+V+ L +M G + + Y L++ Y A
Sbjct: 213 SSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMR-RQGIRPNTITYNTLIDAYGKAKM 271
Query: 279 LVNAESSTLVE--AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 336
V E STL++ E W T + + + G G + ++ ++ + + + R
Sbjct: 272 FVEME-STLIQMLGEDDCKPDSW-TMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRT 329
Query: 337 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 384
+ +L SY G+ K++ ++ ++ Q + I N ++ AF G
Sbjct: 330 FNILLDSYGKSGNYKKMSAVM-EYMQKYHYSWTIVTYNVVIDAFGRAG 376
>gi|255540825|ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550592|gb|EEF52079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 754
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 78/388 (20%), Positives = 164/388 (42%), Gaps = 46/388 (11%)
Query: 57 DLKSRIFRIS-LPKRSATNVIQRWVSE-GNQATVSELRHILKELRKSQRYKHALEISEWM 114
D+++ I ++S LP R + I R + N+ ++++ + KE + ++ +L + ++M
Sbjct: 76 DVETLINKLSSLPPRGS---IARCLEIFKNKLSLNDFALVFKEFAQRGDWQRSLRLFKYM 132
Query: 115 VTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKW 172
++ Y I L+ + + FE +P ++ +YTAL++ Y
Sbjct: 133 QRQIWCKPNEHIYTIIISLLGREGLLEKSTEIFEEMPTHGVPRSVFSYTALINSYGRHGQ 192
Query: 173 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG-QVEKVALVVEEIKRKNVVPDIFTYN 231
E + EL ER+K+ ++ + L YN ++ G E + + E++ + + PDI TYN
Sbjct: 193 YEVSLELLERMKKEKVTPSILTYNTVINSCARGGLNWEGLLSLFAEMRHEGIQPDIITYN 252
Query: 232 LWISSCA------------ATLN-----------------------IDQVKKFLDEMSCD 256
+++CA T+N +++V + L EM
Sbjct: 253 TLLNACANRGLGDEAEMVFRTMNEGGMVPDITTYRNLVETFGKLNKLEKVSELLKEME-S 311
Query: 257 SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKD 316
SG D Y L+ Y + + +A + +++ +TY L+ LY G G D
Sbjct: 312 SGNLPDISSYNVLLEAYASKGDIRHA-MGVFRQMQEARCVPNAVTYSMLLNLYGGHGRYD 370
Query: 317 KIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRL 376
+ +++ ++++ + Y ++ + G+ KEV + + ++ L
Sbjct: 371 DVRELFLEMKVSNTEPDVGTYNVLIEVFGEGGYFKEVVTLFHDMVEENVEP-NMGTYEGL 429
Query: 377 LGAFSDVGLTEKANEFHMLLLQKNCAPT 404
+ A GL E A + + + +K P+
Sbjct: 430 IYACGKGGLHEDAKKILLHMDEKGIVPS 457
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 86/198 (43%), Gaps = 18/198 (9%)
Query: 74 NVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDL 133
+V++R E + V H K + S +KH E M+ K + D +
Sbjct: 45 DVVKRLRQE---SCVPLALHFFKSIANSNLFKHTPLTFEVMI-RKLAMDGQVDSVQYLLQ 100
Query: 134 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 193
K+ G H E F +++ +Y E+A E+F R+K+ +
Sbjct: 101 QMKLQGFHCSEDLF-------------ISVISVYRQVGLAERAVEMFYRIKEFGCDPSVK 147
Query: 194 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
+YN ++ + +++ + +V ++KR P++FTYN+ + + +D KK L EM
Sbjct: 148 IYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEM 207
Query: 254 SCDSGGSDDWVKYVNLVN 271
S + G D V Y +++
Sbjct: 208 S-NKGCCPDAVSYTTVIS 224
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 123/325 (37%), Gaps = 11/325 (3%)
Query: 82 EGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIH 141
+G + V +LK L K+ + A ++ M ++K Y T I M +V +
Sbjct: 175 DGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEM-SNKGCCPDAVSYTTVISSMCEVGLVK 233
Query: 142 SGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTL 201
G E Y AL++ + A EL + + +S N + Y+ ++ +
Sbjct: 234 EGRELAERF---EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINV 290
Query: 202 YMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD 261
+ GQ+E + ++ ++ P+I+T + + C ++M G
Sbjct: 291 LCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQP 350
Query: 262 DWVKYVNLVNIYITASHLVNAES--STLVEAEKSITQRQWITYDFLIILYAGLGNKDKID 319
+ V Y LV + + ++V A S S + E S R TY LI +A G+ D
Sbjct: 351 NVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIR---TYGSLINGFAKRGSLDGAV 407
Query: 320 QIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGA 379
IW + + Y ++ + KE +I+ + + + N +
Sbjct: 408 YIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAP-SVPTFNAFIKG 466
Query: 380 FSDVGLTEKANE-FHMLLLQKNCAP 403
D G + A + F + Q C P
Sbjct: 467 LCDAGRLDWAEKVFRQMEQQHRCPP 491
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 99/211 (46%), Gaps = 2/211 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+ +KA +L++ + + N + Y+ ++ + GQVE ++E+
Sbjct: 438 TYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEM 497
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K ++P+I TYN I + N+ + +KFL +M + S D + Y L++ YI
Sbjct: 498 INKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK-VSPDLITYNTLIHGYIKEDK 556
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ +A L EK Q +TY+ LI ++ GN + I++ + + Y+
Sbjct: 557 MHDA-FKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYM 615
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFD 369
+++ ++ G+ KE ++ D+ Q + D
Sbjct: 616 SMINGHVTAGNSKEAFQLHDEMLQRGFAPDD 646
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 59/340 (17%), Positives = 133/340 (39%), Gaps = 16/340 (4%)
Query: 71 SATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDS--DYA 128
+A ++ VS+G + + +LK L +S + A E+ + M +F ++ +
Sbjct: 209 AAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEM---DDFGVAPDVRSFT 265
Query: 129 TRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQS 186
I +V I + ++ + + +++ L+ L+A + A ++
Sbjct: 266 ILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCF 325
Query: 187 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 246
L + ++Y ++ + G + V +E+ +PD+ TYN ++ +
Sbjct: 326 GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA 385
Query: 247 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR---QWITYD 303
+ L+EM + G D + L++ Y L A L + + QR +TY+
Sbjct: 386 EGLLNEMR-ERGVPPDLCTFTTLIHGYCIEGKLDKA----LQLFDTMLNQRLRPDIVTYN 440
Query: 304 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 363
LI G+ DK + +W + + Y ++ S+ G +++ +D+
Sbjct: 441 TLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINK 500
Query: 364 ATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
+I N ++ + G K +F ++ +P
Sbjct: 501 GILP-NIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSP 539
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 54/283 (19%), Positives = 111/283 (39%), Gaps = 40/283 (14%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY LL+ + AE L +++ + + + ++ Y G+++K + + +
Sbjct: 368 TYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTM 427
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM------------------SCDSGGS 260
+ + PDI TYN I ++D+ D+M C+ G
Sbjct: 428 LNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQV 487
Query: 261 DDWVKYVN-------LVNIYITASHLVNAESSTLVEAEKSITQRQW--------ITYDFL 305
+D +++ L NI S + S V + Q+ ITY+ L
Sbjct: 488 EDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTL 547
Query: 306 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQWKQ 362
I G +DK+ +K L M +++ + Y +++ + + G+++E G I ++
Sbjct: 548 I---HGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCA 604
Query: 363 SATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 405
D ++ G +++A + H +LQ+ AP +
Sbjct: 605 KGIEP-DRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDD 646
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 44/234 (18%), Positives = 89/234 (38%), Gaps = 3/234 (1%)
Query: 170 AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFT 229
A W A + + V SN N N M+ Y + +KV V+ E++++ V PD+ T
Sbjct: 134 AGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVT 193
Query: 230 YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVE 289
+N+ + + + + +D M S G + N V + S + + E
Sbjct: 194 HNVMVDARFRAGDAEAAMALVDSMV--SKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKE 251
Query: 290 AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGH 349
+ ++ LI + +G ++ +I+K +R K ++ C++ + G
Sbjct: 252 MDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGK 311
Query: 350 LKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
+ + + + D ++G F GL A ++ C P
Sbjct: 312 MDHAMAYLREMRCFGLVP-DGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLP 364
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 25/125 (20%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
Query: 140 IHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 197
+ G+++ + + ++ + + TY L+H Y A +L +++ + + + YN
Sbjct: 522 VSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNM 581
Query: 198 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 257
++ + G V++ + E++ K + PD +TY I+ N + + DEM
Sbjct: 582 LINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 641
Query: 258 GGSDD 262
DD
Sbjct: 642 FAPDD 646
>gi|147825385|emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
Length = 821
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 113/254 (44%), Gaps = 12/254 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-EKVALVVEE 217
+T +LH Y+ E+A +FE+++++ LS + YN M+ +Y +G+ K+ +++E
Sbjct: 211 AWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDE 270
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
++ + D FT + IS+C +D+ +KF + + G Y +L+ ++ A
Sbjct: 271 MRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSE-GYVAGTFTYNSLLQVFGKAG 329
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG----NKDKIDQIWKSLRMTKQKMT 333
+ + S L E EK+ +TY+ L+ Y G D ID + + M
Sbjct: 330 -IYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMP----N 384
Query: 334 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 393
+ Y ++++Y G + Q K+S ++ N +LG E+ +
Sbjct: 385 AITYTTVINAYGKAGKEDKALSFFRQMKESGCVP-NVCTYNAILGMLGKKSRLEEMIDML 443
Query: 394 MLLLQKNCAPTNAS 407
+ CAP + +
Sbjct: 444 CDMRSNGCAPNSVT 457
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/314 (18%), Positives = 131/314 (41%), Gaps = 18/314 (5%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLS 153
+L E+R + LE E+ + V+S +D K F E Y G
Sbjct: 267 LLDEMRS-----NGLEFDEFTCST---VISACGREGLLDEARKFFARLKSEGYVAG---- 314
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
+ TY +LL ++ A +A + + ++++N + + YNE++ Y+ G E+ A
Sbjct: 315 ---TFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGAD 371
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
++ + RK ++P+ TY I++ D+ F +M +SG + Y ++ +
Sbjct: 372 FIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMK-ESGCVPNVCTYNAILGML 430
Query: 274 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
S L L + + +T++ ++ + G ++++++ ++ +
Sbjct: 431 GKKSRL-EEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPN 489
Query: 334 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 393
+ ++ +Y G +V ++ ++ ++ + ++ N LL A + G E A
Sbjct: 490 RDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPC-VTTYNALLNALARRGDWEAAESVI 548
Query: 394 MLLLQKNCAPTNAS 407
+ + K P S
Sbjct: 549 LDMKSKGFKPNETS 562
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 101/246 (41%), Gaps = 5/246 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY ALL+ A E AE + +K N Y+ M+ Y G + + EEI
Sbjct: 527 TYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEI 586
Query: 219 KRKNVVPD-IFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
++ P I L +++ + + F + C G D V + ++++I+ +
Sbjct: 587 YNGHIFPSWILLRTLVLANFKRRALMGMERAFQE--FCKHGYKPDLVLFNSMLSIF-AKN 643
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
+ + L +S Q +TY+ L+ +YA G K ++I K ++ + K +Y
Sbjct: 644 KMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSY 703
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 397
++ + G ++E + + S I N + +S G+ + E ++
Sbjct: 704 NTVIKGFCRQGLMQEAIRTLSEMTISGIRPC-IVTYNTFVAGYSGKGMFSEVEEVISYMI 762
Query: 398 QKNCAP 403
Q +C P
Sbjct: 763 QHDCRP 768
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 98/222 (44%), Gaps = 15/222 (6%)
Query: 151 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 210
P SA YT L+ A A+ E+A EL +++ + ++ ++ GQ+E
Sbjct: 175 PFSA-----YTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEP 229
Query: 211 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 270
+V+E+K + PDI YN+ I ++D KF E+ DD V Y ++V
Sbjct: 230 ALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDD-VSYTSMV 288
Query: 271 NIYITASHLVNAES-STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
+ A L AE +EAE+ + Y+ +I+ G G+ ++ D +K L +
Sbjct: 289 WVLCKAGRLGEAEELFGQMEAERDVP--CAYAYNTMIM---GYGSAERFDDAYKLLERLR 343
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGE---IIDQWKQSATSDF 368
++ + + S LG ++V E + D K+ A +
Sbjct: 344 ERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDAKPNI 385
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 85/183 (46%), Gaps = 10/183 (5%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLS 153
++ L K+ + + I + M + + F L Y +D + K + E + +
Sbjct: 566 LIHGLTKAGQARETSNIFQAM-SQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVK 624
Query: 154 A--KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 211
T TY +++ A ++A LFE K + N ++Y+ ++ + VG++++
Sbjct: 625 HVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEA 684
Query: 212 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK---KFLDEMSCDSGGSDDWVKYVN 268
L++EE+ +K + P+++T+N + + T ID+ + + EM C S + Y
Sbjct: 685 YLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKC----SPNTYTYSI 740
Query: 269 LVN 271
L+N
Sbjct: 741 LIN 743
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Query: 129 TRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQS 186
T +D + K + G FE + + +Y+ L+H A + +F+ + Q
Sbjct: 530 TYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQ 589
Query: 187 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 246
+ +A YN ++ G+V+K V+EE+K K+V P + TY + A +D+
Sbjct: 590 GFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEA 649
Query: 247 KKFLDE 252
+E
Sbjct: 650 YMLFEE 655
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 121/295 (41%), Gaps = 49/295 (16%)
Query: 68 PKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWM---VTHKEFVLSD 124
P+R A ++++ G + +V +++ L + + + AL + + + + VL
Sbjct: 192 PER-ALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVL-- 248
Query: 125 SDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFER 182
Y ID K + ++F L + +YT+++ + A +AEELF +
Sbjct: 249 --YNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQ 306
Query: 183 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 242
++ A YN M+ Y S + + ++E ++ + +P + ++N ++
Sbjct: 307 MEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRK 366
Query: 243 IDQVKKFLD-----------------EMSCDSGGSDDWVK----------YVNLVNIYIT 275
+D+ D +M C +G ++ K + NL+++ I
Sbjct: 367 VDEALTLFDVMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIM 426
Query: 276 ASHLVNAESSTLVEAEK---SITQRQW----ITYDFLIILYAGLGNKDKIDQIWK 323
L A + L EA + S ++R +TY LI GLG K KID ++
Sbjct: 427 VDRLCKA--NQLEEAHRIFESASERGCNPNSVTYCSLI---DGLGKKGKIDDAYR 476
>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
Length = 807
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 118/284 (41%), Gaps = 10/284 (3%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQS 186
Y I+ + K + ER + +P+ T YT+++ + A KA L E +K+
Sbjct: 229 YTVVINGLVKAGKVAEAERVLQEMPVP--TLANYTSVIGGHCKAGDMGKAYHLLEDMKRK 286
Query: 187 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 246
+ L YN ++ + + ++++ ++EE+K + VPDIFTY++ I+ + +
Sbjct: 287 GYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEA 346
Query: 247 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI 306
+ L + + + + V Y L++ + A+ VN +E + +TY LI
Sbjct: 347 RDLLGTLRNEDDCTPNVVSYNTLIDGFSKAAR-VNDAYQLFLEMVTAGQHPDVVTYSTLI 405
Query: 307 ILYAGLGNKDKIDQIWKSL-RMTKQKMTSR--NYICILSSYLMLGHLKEVGEIIDQWKQS 363
GL N + + L M +K+ + Y ++S G L + D +
Sbjct: 406 ---RGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVAN 462
Query: 364 ATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
+++ N L+ G A + ++ C+P +
Sbjct: 463 GCQP-NLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVT 505
>gi|224089803|ref|XP_002308816.1| predicted protein [Populus trichocarpa]
gi|222854792|gb|EEE92339.1| predicted protein [Populus trichocarpa]
Length = 700
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 54/95 (56%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY ALLH Y A++ E A +++ +K+ L N ++YN ++ + +G V+K + E++
Sbjct: 353 TYAALLHAYGRARYGEDAFKIYREMKEKGLGLNVVLYNSILAMCADLGHVDKAVEIFEDM 412
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
K + PD +T++ I+ + + + + L+EM
Sbjct: 413 KSSGIKPDSWTFSSMITIFSCCGKVSEAENTLNEM 447
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 101/216 (46%), Gaps = 4/216 (1%)
Query: 146 YFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM 203
+FE +P + T + ++ Y A EKA L++R + +A ++ ++ +Y
Sbjct: 233 WFEKMPSFGLEPDDVTLSTMIDSYGRAGNVEKALSLYDRARTGEWRLDATAFSTLIRIYK 292
Query: 204 SVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW 263
G + V EE+K V P++ YN+ + + QVKKF ++ D+G S +
Sbjct: 293 VAGNFDGCLNVYEEMKALGVKPNLVIYNILLDAMGRAKRPWQVKKFYQDI-IDNGLSPSF 351
Query: 264 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 323
V Y L++ Y A + +A EK + + Y+ ++ + A LG+ DK +I++
Sbjct: 352 VTYAALLHAYGRARYGEDAFKIYREMKEKGL-GLNVVLYNSILAMCADLGHVDKAVEIFE 410
Query: 324 SLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 359
++ + K S + +++ + G + E +++
Sbjct: 411 DMKSSGIKPDSWTFSSMITIFSCCGKVSEAENTLNE 446
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 41/87 (47%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y ++L + A +KA E+FE +K S + ++ ++ M+T++ G+V + + E+
Sbjct: 389 YNSILAMCADLGHVDKAVEIFEDMKSSGIKPDSWTFSSMITIFSCCGKVSEAENTLNEMF 448
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQV 246
P+IF I ID V
Sbjct: 449 EAGFQPNIFILTSLIQCYGKAQRIDDV 475
>gi|15226907|ref|NP_181058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100538|sp|O82178.1|PP186_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g35130
gi|3668091|gb|AAC61823.1| hypothetical protein [Arabidopsis thaliana]
gi|330253974|gb|AEC09068.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 591
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 110/251 (43%), Gaps = 5/251 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYTAL++ +A EKAEE+FE++++ L + +YN +M Y G A + +
Sbjct: 301 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM 360
Query: 219 KRKNVVPDIFTYNLWISSCA-ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
+ PD +YN+ + + A L+ D F +EM G + ++ L++ Y A
Sbjct: 361 QHMGCEPDRASYNIMVDAYGRAGLHSDAEAVF-EEMK-RLGIAPTMKSHMLLLSAYSKAR 418
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
+ E+ +E + ++ + ++ LY LG K+++I + Y
Sbjct: 419 DVTKCEAIVKEMSENGVEPDTFVL-NSMLNLYGRLGQFTKMEKILAEMENGPCTADISTY 477
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 397
+++ Y G L+ + E+ + K+ D+ +GA+S L K E ++
Sbjct: 478 NILINIYGKAGFLERIEELFVELKEKNFRP-DVVTWTSRIGAYSRKKLYVKCLEVFEEMI 536
Query: 398 QKNCAPTNASG 408
CAP +
Sbjct: 537 DSGCAPDGGTA 547
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 108/253 (42%), Gaps = 13/253 (5%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
T+ETY +++LY A + + +L+ ++ N Y ++ + G EK +
Sbjct: 263 TTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIF 322
Query: 216 EEIKRKNVVPDIFTYNLWISS---CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 272
E+++ + PD++ YN + S ++ + M C+ D Y +V+
Sbjct: 323 EQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEP----DRASYNIMVDA 378
Query: 273 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 332
Y A +AE + E ++ ++ L+ Y+ + K + I K M++ +
Sbjct: 379 YGRAGLHSDAE-AVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVK--EMSENGV 435
Query: 333 TSRNYI--CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 390
++ +L+ Y LG ++ +I+ + + + DIS N L+ + G E+
Sbjct: 436 EPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTA-DISTYNILINIYGKAGFLERIE 494
Query: 391 EFHMLLLQKNCAP 403
E + L +KN P
Sbjct: 495 ELFVELKEKNFRP 507
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 5/146 (3%)
Query: 109 EISEWMVTHKEFVLSDS-DYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLY 167
E+SE V FVL+ + R+ TK+ I + E P +A S TY L+++Y
Sbjct: 429 EMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAE---MENGPCTADIS-TYNILINIY 484
Query: 168 AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 227
A + E+ EELF +K+ N + + + + Y K V EE+ PD
Sbjct: 485 GKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDG 544
Query: 228 FTYNLWISSCAATLNIDQVKKFLDEM 253
T + +S+C++ ++QV L M
Sbjct: 545 GTAKVLLSACSSEEQVEQVTSVLRTM 570
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Query: 139 GIHS-GERYFEGLPL--SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 195
G+HS E FE + A T +++ LL Y+ A+ K E + + + ++ + + +
Sbjct: 383 GLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVL 442
Query: 196 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
N M+ LY +GQ K+ ++ E++ DI TYN+ I+ ++++++ E+
Sbjct: 443 NSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVEL 500
Score = 37.7 bits (86), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 67/157 (42%), Gaps = 6/157 (3%)
Query: 85 QATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGE 144
A+ +L ++ +LR ++++ + + EW++ F + ID + F E
Sbjct: 116 HASWDDLINVSVQLRLNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAE 175
Query: 145 RYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLS---FNALMYNEMM 199
+ L S T +TY L+ Y A E+AE + ++ ++S +YN +
Sbjct: 176 SLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYI 235
Query: 200 TLYMS-VGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
M G E+ V + +KR P TYNL I+
Sbjct: 236 EGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMIN 272
>gi|225445998|ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
[Vitis vinifera]
gi|297735424|emb|CBI17864.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 113/254 (44%), Gaps = 12/254 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-EKVALVVEE 217
+T +LH Y+ E+A +FE+++++ LS + YN M+ +Y +G+ K+ +++E
Sbjct: 211 AWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDE 270
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
++ + D FT + IS+C +D+ +KF + + G Y +L+ ++ A
Sbjct: 271 MRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSE-GYVAGTFTYNSLLQVFGKAG 329
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG----NKDKIDQIWKSLRMTKQKMT 333
+ + S L E EK+ +TY+ L+ Y G D ID + + M
Sbjct: 330 -IYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMP----N 384
Query: 334 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 393
+ Y ++++Y G + Q K+S ++ N +LG E+ +
Sbjct: 385 AITYTTVINAYGKAGKEDKALSFFRQMKESGCVP-NVCTYNAILGMLGKKSRLEEMIDML 443
Query: 394 MLLLQKNCAPTNAS 407
+ CAP + +
Sbjct: 444 CDMRSNGCAPNSVT 457
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/314 (18%), Positives = 131/314 (41%), Gaps = 18/314 (5%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLS 153
+L E+R + LE E+ + V+S +D K F E Y G
Sbjct: 267 LLDEMRS-----NGLEFDEFTCST---VISACGREGLLDEARKFFARLKSEGYVAG---- 314
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
+ TY +LL ++ A +A + + ++++N + + YNE++ Y+ G E+ A
Sbjct: 315 ---TFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGAD 371
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
++ + RK ++P+ TY I++ D+ F +M +SG + Y ++ +
Sbjct: 372 FIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMK-ESGCVPNVCTYNAILGML 430
Query: 274 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
S L L + + +T++ ++ + G ++++++ ++ +
Sbjct: 431 GKKSRL-EEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPN 489
Query: 334 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 393
+ ++ +Y G +V ++ ++ ++ + ++ N LL A + G E A
Sbjct: 490 RDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPC-VTTYNALLNALARRGDWEAAESVI 548
Query: 394 MLLLQKNCAPTNAS 407
+ + K P S
Sbjct: 549 LDMKSKGFKPNETS 562
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 101/246 (41%), Gaps = 5/246 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY ALL+ A E AE + +K N Y+ M+ Y G + + EEI
Sbjct: 527 TYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEI 586
Query: 219 KRKNVVPD-IFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
++ P I L +++ + + F + C G D V + ++++I+ +
Sbjct: 587 YNGHIFPSWILLRTLVLANFKRRALMGMERAFQE--FCKHGYKPDLVLFNSMLSIF-AKN 643
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
+ + L +S Q +TY+ L+ +YA G K ++I K ++ + K +Y
Sbjct: 644 KMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSY 703
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 397
++ + G ++E + + S I N + +S G+ + E ++
Sbjct: 704 NTVIKGFCRQGLMQEAIRTLSEMTISGIRPC-IVTYNTFVAGYSGKGMFSEVEEVISYMI 762
Query: 398 QKNCAP 403
Q +C P
Sbjct: 763 QHDCRP 768
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 7/204 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
YT L+ A A+ E+A EL ++++ ++ ++ GQV +V+E+
Sbjct: 181 AYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEV 240
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K + PDI YN+ I N+D KF E+ DD V Y +++ + A
Sbjct: 241 KGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDD-VSYTSMIWVLCKAGR 299
Query: 279 LVNAES-STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
L AE +EAE+S+ Y+ +I+ G G+ + + +K L +++ +
Sbjct: 300 LGEAEELFAQMEAERSVP--CAYAYNTMIM---GYGSAGRFEDAYKLLERLRERGCIPSV 354
Query: 338 ICILSSYLMLGHLKEVGEIIDQWK 361
+ S LG ++V E + ++
Sbjct: 355 VSFNSILTCLGKKRKVDEALSLFE 378
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 65/143 (45%), Gaps = 5/143 (3%)
Query: 120 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLP--LSAKTSETYTALLHLYAGAKWTEKAE 177
F L Y +D K +H E + T TY A++ A ++A
Sbjct: 594 FALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAY 653
Query: 178 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 237
LFE K + N ++Y+ ++ + VG++++ L++EE+ +K + P+++T+N + +
Sbjct: 654 MLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDAL 713
Query: 238 AATLNIDQVK---KFLDEMSCDS 257
I++ + + EM C
Sbjct: 714 VKAEEINEALVCFQSMKEMKCPP 736
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 55/130 (42%), Gaps = 10/130 (7%)
Query: 129 TRIDLMTKVFGIHSGERYFEG------LPLSAKTSETYTALLHLYAGAKWTEKAEELFER 182
T +D + K + G FE LP +Y+ L+H A + +F
Sbjct: 533 TYMDCVFKAGEVEKGRMIFEDIRSYGFLP----DVRSYSILIHGLTKAGQARETSNIFHA 588
Query: 183 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 242
+KQ + +A YN ++ + G+V K ++EE+K K V P + TY + A
Sbjct: 589 MKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDR 648
Query: 243 IDQVKKFLDE 252
+D+ +E
Sbjct: 649 LDEAYMLFEE 658
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 93/233 (39%), Gaps = 41/233 (17%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 184
Y ID K + ++F L + +YT+++ + A +AEELF +++
Sbjct: 252 YNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQME 311
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
A YN M+ Y S G+ E ++E ++ + +P + ++N ++ +D
Sbjct: 312 AERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVD 371
Query: 245 QVKKFLD-----------------EMSCDSGGSDDWVK----------YVNLVNIYITAS 277
+ + +M C G ++ + + NL+ + I
Sbjct: 372 EALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVD 431
Query: 278 HLVNAESSTLVEAEK---SITQR----QWITYDFLIILYAGLGNKDKIDQIWK 323
L A L EA K S +QR +TY LI GLG K ++D+ ++
Sbjct: 432 RLCKARK--LEEAYKIFESASQRGCNPDCVTYCSLI---DGLGKKGQVDEAYR 479
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 101/256 (39%), Gaps = 13/256 (5%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
S TY ++ + E+A + + ++ ++L N L N M+ ++E+ + E
Sbjct: 388 SSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFE 447
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV-NIYIT 275
++ PD TY I +D+ + ++M D+G + + V Y +L+ N +I
Sbjct: 448 SASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKM-LDAGHNANPVVYTSLIRNFFI- 505
Query: 276 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL----GNKDKIDQIWKSLRMTKQK 331
H + + K + +R L+ Y G +K I++ +R
Sbjct: 506 --HGRKEDGHKIF---KELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFL 560
Query: 332 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 391
R+Y ++ G +E I KQ + D A N ++ F G KA E
Sbjct: 561 PDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFA-LDARAYNAVVDGFCKSGKVHKAYE 619
Query: 392 FHMLLLQKNCAPTNAS 407
+ +K PT A+
Sbjct: 620 ILEEMKEKCVQPTVAT 635
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 50/259 (19%), Positives = 103/259 (39%), Gaps = 11/259 (4%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 184
Y + ID + K + R FE + + + YT+L+ + E ++F+ +
Sbjct: 461 YCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELI 520
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
+ + + N M G+VEK ++ E+I+ +PD+ +Y++ I
Sbjct: 521 RRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQAR 580
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 304
+ M G + D Y +V+ + + V+ L E ++ Q TY
Sbjct: 581 ETSNIFHAMK-QQGFALDARAYNAVVDGFCKSGK-VHKAYEILEEMKEKCVQPTVATYGA 638
Query: 305 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQWK 361
++ GL D++D+ + K K N Y ++ + +G + E I+++
Sbjct: 639 IV---DGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMM 695
Query: 362 QSATSDFDISACNRLLGAF 380
+ + ++ N LL A
Sbjct: 696 KKGLTP-NVYTWNSLLDAL 713
Score = 38.1 bits (87), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 71/179 (39%), Gaps = 3/179 (1%)
Query: 85 QATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGE 144
Q TV+ I+ L K R A + E K L+ Y++ ID KV I
Sbjct: 630 QPTVATYGAIVDGLAKIDRLDEAYMLFEE-AKSKGIELNVVLYSSLIDGFGKVGRIDEAY 688
Query: 145 RYFEGLPLSAKTSETYT--ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY 202
E + T YT +LL A+ +A F+ +K+ N Y+ ++
Sbjct: 689 LILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGL 748
Query: 203 MSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD 261
V + K + ++++++ +VP++ TY IS A NI + + G D
Sbjct: 749 CRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPD 807
>gi|297853022|ref|XP_002894392.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340234|gb|EFH70651.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 525
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 117/290 (40%), Gaps = 17/290 (5%)
Query: 64 RISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEF--V 121
R +LP A+ R V G + V +L +L L + HA E+ K F V
Sbjct: 150 RANLPS-EASRAFNRMVEFGIKPCVDDLDQLLHSLCDRKHVNHA---QEFFDKAKGFGIV 205
Query: 122 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEEL 179
S Y+ + ++ + F+ + + + Y ALL + + A ++
Sbjct: 206 PSAKTYSILVRGWARIRDASGARKVFDEMLENNCVVDLLAYNALLDALCKSGDVDGAYKM 265
Query: 180 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 239
F+ + L +A + + Y V V++ +KR ++VP+++T+N I +
Sbjct: 266 FQEMGNLGLKPDAYSFAIFIHSYCDASDVHSAYQVLDRMKRYDLVPNVYTFNHIIKTLCK 325
Query: 240 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 299
+D LDEM D W N + Y VN + L +++
Sbjct: 326 NEKVDDAYLLLDEMIQKGANPDTWT--YNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDR 383
Query: 300 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGH 349
TY+ ++ L +G D++ +IW+ M+ R + +++Y ++ H
Sbjct: 384 HTYNMVLKLLIRIGRFDRVTEIWEG-------MSERKFYPTVATYTVMIH 426
>gi|255553476|ref|XP_002517779.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543051|gb|EEF44586.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 486
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 132/318 (41%), Gaps = 23/318 (7%)
Query: 88 VSELRHILKELRKSQRYKHALEISEWMVTHKEF----------VLSDSDYATRIDLMTKV 137
V RH KEL + R A++ E ++ L D+ R K+
Sbjct: 55 VGPKRHTKKELSRFLRTDAAIKAIEQKADSSKYNRLWPKAVLEALDDAIKERRWKSALKI 114
Query: 138 FGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 197
F + + ++E +TYT LL + + E+A LFE ++ L +Y
Sbjct: 115 FELLRKQHWYE------PRCQTYTKLLMMLGKCRQPEEARLLFEVMQTEGLRPTIDVYTA 168
Query: 198 MMTLYMSVGQVEKVALVVEEIKR-KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCD 256
+++ Y G + K V+E+K + PD++TY++ I+ C D + + L EMS
Sbjct: 169 LVSAYGESGLLAKAFSTVDEMKSVSDCKPDVYTYSVLINICTKLHRFDLIGRILSEMSY- 227
Query: 257 SGGSDDWVKYVNLVNIYITASHLVNAESS--TLVEAEKSITQRQWITYDFLIILYAGLGN 314
G V + ++N Y A E+S ++E S+ T++ +I Y G
Sbjct: 228 LGVECSTVTFNTIINGYGKAKMFREMENSLTNMIEIGNSVP--DLFTFNSVIGAYGNSGR 285
Query: 315 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 374
+K+++ + ++ + + ++ SY G +++ +I+ K+ + N
Sbjct: 286 IEKMEKWYNEFQLMGISPDIKTFNILIKSYGKAGMYEKINSVIEFMKKRFFPP-TVVTYN 344
Query: 375 RLLGAFSDVGLTEKANEF 392
++ F G E +E+
Sbjct: 345 IIIETFGRAGDIENMDEY 362
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 91/190 (47%), Gaps = 3/190 (1%)
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
I+ N VPD+FT+N I + + I++++K+ +E G S D + L+ Y A
Sbjct: 261 IEIGNSVPDLFTFNSVIGAYGNSGRIEKMEKWYNEFQL-MGISPDIKTFNILIKSYGKAG 319
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
+ +S + +K +TY+ +I + G+ + +D+ +K+++ K + Y
Sbjct: 320 -MYEKINSVIEFMKKRFFPPTVVTYNIIIETFGRAGDIENMDEYFKTMKHLGMKPNAITY 378
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 397
++S+Y G L +V I+ Q + S D + N ++ A+ G +K E + +
Sbjct: 379 CSLVSAYSKAGLLMKVNSILRQVENSDVV-LDTTFFNCIINAYGQAGDVDKMAELFLEMR 437
Query: 398 QKNCAPTNAS 407
++ C P N +
Sbjct: 438 ERECMPDNVT 447
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 80/168 (47%), Gaps = 2/168 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+ +++ Y + EK E+ + + +S + +N ++ Y G EK+ V+E +
Sbjct: 272 TFNSVIGAYGNSGRIEKMEKWYNEFQLMGISPDIKTFNILIKSYGKAGMYEKINSVIEFM 331
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K++ P + TYN+ I + +I+ + ++ M G + + Y +LV+ Y A
Sbjct: 332 KKRFFPPTVVTYNIIIETFGRAGDIENMDEYFKTMK-HLGMKPNAITYCSLVSAYSKAGL 390
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 326
L+ +S L + E S ++ +I Y G+ DK+ +++ +R
Sbjct: 391 LMKV-NSILRQVENSDVVLDTTFFNCIINAYGQAGDVDKMAELFLEMR 437
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
T TY ++ + A E +E F+ +K + NA+ Y +++ Y G + KV
Sbjct: 337 PPTVVTYNIIIETFGRAGDIENMDEYFKTMKHLGMKPNAITYCSLVSAYSKAGLLMKVNS 396
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
++ +++ +VV D +N I++ ++D++ + EM D+ V + ++ Y
Sbjct: 397 ILRQVENSDVVLDTTFFNCIINAYGQAGDVDKMAELFLEMRERECMPDN-VTFATMIQAY 455
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 102/249 (40%), Gaps = 3/249 (1%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
T YT L+ G +AE +F ++ S + N YN MM Y + V+K +
Sbjct: 226 PTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALEL 285
Query: 215 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274
E+ ++P++ T+ + I T + +KFL +M+ G + Y L++ Y
Sbjct: 286 YXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMA-SFGVVPNIFVYNCLIDGYC 344
Query: 275 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 334
A +L A S E EK TY LI G+ ++ D + + ++ +
Sbjct: 345 KAGNLSEA-LSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNA 403
Query: 335 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 394
Y ++ Y G++++ E+ Q + +I + L+ + G E A +
Sbjct: 404 VTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEP-NIITFSTLIDGYCKAGKMEAAMGLYT 462
Query: 395 LLLQKNCAP 403
++ K P
Sbjct: 463 EMVIKGLLP 471
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY+ L+ G E+A+ L + +K+ NA+ YN ++ Y G +EK V ++
Sbjct: 370 TYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQM 429
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
K + P+I T++ I ++ EM G D V Y L++
Sbjct: 430 TEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVI-KGLLPDVVAYTALID 481
>gi|334184699|ref|NP_001189682.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330253975|gb|AEC09069.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 613
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 110/251 (43%), Gaps = 5/251 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYTAL++ +A EKAEE+FE++++ L + +YN +M Y G A + +
Sbjct: 323 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM 382
Query: 219 KRKNVVPDIFTYNLWISSCA-ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
+ PD +YN+ + + A L+ D F +EM G + ++ L++ Y A
Sbjct: 383 QHMGCEPDRASYNIMVDAYGRAGLHSDAEAVF-EEMK-RLGIAPTMKSHMLLLSAYSKAR 440
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
+ E+ +E + ++ + ++ LY LG K+++I + Y
Sbjct: 441 DVTKCEAIVKEMSENGVEPDTFVL-NSMLNLYGRLGQFTKMEKILAEMENGPCTADISTY 499
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 397
+++ Y G L+ + E+ + K+ D+ +GA+S L K E ++
Sbjct: 500 NILINIYGKAGFLERIEELFVELKEKNFRP-DVVTWTSRIGAYSRKKLYVKCLEVFEEMI 558
Query: 398 QKNCAPTNASG 408
CAP +
Sbjct: 559 DSGCAPDGGTA 569
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 108/253 (42%), Gaps = 13/253 (5%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
T+ETY +++LY A + + +L+ ++ N Y ++ + G EK +
Sbjct: 285 TTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIF 344
Query: 216 EEIKRKNVVPDIFTYNLWISS---CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 272
E+++ + PD++ YN + S ++ + M C+ D Y +V+
Sbjct: 345 EQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEP----DRASYNIMVDA 400
Query: 273 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 332
Y A +AE + E ++ ++ L+ Y+ + K + I K M++ +
Sbjct: 401 YGRAGLHSDAE-AVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVK--EMSENGV 457
Query: 333 TSRNYIC--ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 390
++ +L+ Y LG ++ +I+ + + + DIS N L+ + G E+
Sbjct: 458 EPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTA-DISTYNILINIYGKAGFLERIE 516
Query: 391 EFHMLLLQKNCAP 403
E + L +KN P
Sbjct: 517 ELFVELKEKNFRP 529
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 5/146 (3%)
Query: 109 EISEWMVTHKEFVLSDS-DYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLY 167
E+SE V FVL+ + R+ TK+ I + E P +A S TY L+++Y
Sbjct: 451 EMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAE---MENGPCTADIS-TYNILINIY 506
Query: 168 AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 227
A + E+ EELF +K+ N + + + + Y K V EE+ PD
Sbjct: 507 GKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDG 566
Query: 228 FTYNLWISSCAATLNIDQVKKFLDEM 253
T + +S+C++ ++QV L M
Sbjct: 567 GTAKVLLSACSSEEQVEQVTSVLRTM 592
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Query: 139 GIHS-GERYFEGLPL--SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 195
G+HS E FE + A T +++ LL Y+ A+ K E + + + ++ + + +
Sbjct: 405 GLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVL 464
Query: 196 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
N M+ LY +GQ K+ ++ E++ DI TYN+ I+ ++++++ E+
Sbjct: 465 NSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVEL 522
Score = 37.7 bits (86), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 67/157 (42%), Gaps = 6/157 (3%)
Query: 85 QATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGE 144
A+ +L ++ +LR ++++ + + EW++ F + ID + F E
Sbjct: 138 HASWDDLINVSVQLRLNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAE 197
Query: 145 RYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLS---FNALMYNEMM 199
+ L S T +TY L+ Y A E+AE + ++ ++S +YN +
Sbjct: 198 SLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYI 257
Query: 200 TLYMS-VGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
M G E+ V + +KR P TYNL I+
Sbjct: 258 EGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMIN 294
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 103/248 (41%), Gaps = 12/248 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
Y A++ Y GA + A L V + +A YN ++ G+ V+E++
Sbjct: 136 VYNAMVAGYCGAGQLDAARRL---VADMPVEPDAYTYNTLIRGLCGRGRTSNALAVLEDM 192
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
R+ +PD+ TY + + + Q K LDEM D G + D V Y N+V I
Sbjct: 193 FRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMH-DKGCAPDIVTY-NVVLNGICQEG 250
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
V L + ++Y+ I+ GL ++ + K + K N +
Sbjct: 251 RVEDAMEFLKNLPSYGCEPNTVSYN---IVLKGLFTAERWEDAEKLMEEMAHKGCPPNVV 307
Query: 339 C--ILSSYLM-LGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 395
+L S+L G ++ E+++Q Q + +S N LL AF KA EF L
Sbjct: 308 TFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSY-NPLLHAFCKQKKIHKAMEFVEL 366
Query: 396 LLQKNCAP 403
++ + C P
Sbjct: 367 MVSRGCYP 374
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 79/197 (40%), Gaps = 4/197 (2%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
A ++ S G + +LK L ++R++ A ++ E M HK + + I
Sbjct: 255 AMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEM-AHKGCPPNVVTFNMLI 313
Query: 132 DLMTKVFGIHSGERYFEGLPLSAKT--SETYTALLHLYAGAKWTEKAEELFERVKQSNLS 189
+ + + E +P T S +Y LLH + K KA E E +
Sbjct: 314 SFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCY 373
Query: 190 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 249
+ + YN ++T G+V+ ++ ++K K P + +YN I + +
Sbjct: 374 PDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALEL 433
Query: 250 LDEMSCDSGGSDDWVKY 266
LDEM+ G D + Y
Sbjct: 434 LDEMT-SKGLQPDIITY 449
>gi|242050640|ref|XP_002463064.1| hypothetical protein SORBIDRAFT_02g037020 [Sorghum bicolor]
gi|241926441|gb|EER99585.1| hypothetical protein SORBIDRAFT_02g037020 [Sorghum bicolor]
Length = 558
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/321 (19%), Positives = 128/321 (39%), Gaps = 13/321 (4%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGER-YFEGLPL 152
+++E+ S KHA+ + WM + + + Y I L + + +FE
Sbjct: 123 LIREITISGSLKHAVHVFRWMKIQENYCARNDIYGMMIRLHARHNQVDQARGLFFEMQEW 182
Query: 153 SAKT-SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 211
K ++TY +L+H +A A A + + ++++ + + YN ++ + G +K
Sbjct: 183 RCKPDTDTYNSLIHAHARAGQWRWAINIMDDMQRAAIPPSRTTYNNVINACGAAGNWKKA 242
Query: 212 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL-- 269
+ +++ V PD+ T+N+ +S+ + + + M D + +
Sbjct: 243 LELCKKMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKSSKVAPDTCTMNIVIHC 302
Query: 270 ---VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 326
V +Y A L N+ + ++I +TY ++ Y+ G + ++ +
Sbjct: 303 LVKVALYGEAIELFNS-----MRERRTICPPDVVTYTSIMYSYSVCGQAENCKAVFDMMV 357
Query: 327 MTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLT 386
+ +Y +L +Y G E E KQ+ DI + LL A+ L
Sbjct: 358 AEGVRPNIVSYNALLGAYASHGMHTEALETFKLLKQNGFKP-DIVSYTSLLNAYGRSALP 416
Query: 387 EKANEFHMLLLQKNCAPTNAS 407
EKA E + + C P S
Sbjct: 417 EKAREVFNEMRKNACKPNKVS 437
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 47/80 (58%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+YT+LL+ Y + EKA E+F ++++ N + YN ++ Y S G +++ ++ E+
Sbjct: 402 SYTSLLNAYGRSALPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEM 461
Query: 219 KRKNVVPDIFTYNLWISSCA 238
++ + PD+ + + +++C
Sbjct: 462 EQDGIQPDVISISTLLTACG 481
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 88/198 (44%), Gaps = 2/198 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT++++ Y+ E + +F+ + + N + YN ++ Y S G + + +
Sbjct: 332 TYTSIMYSYSVCGQAENCKAVFDMMVAEGVRPNIVSYNALLGAYASHGMHTEALETFKLL 391
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K+ PDI +Y +++ + ++ ++ +EM ++ + V Y L++ Y +A
Sbjct: 392 KQNGFKPDIVSYTSLLNAYGRSALPEKAREVFNEMRKNACKPNK-VSYNALIDAYGSAGM 450
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L A S L E E+ Q I+ L+ KI I + + ++ + Y
Sbjct: 451 LKEA-ISLLHEMEQDGIQPDVISISTLLTACGRCRQPTKIGIILAAAKSRGIQLNTVAYN 509
Query: 339 CILSSYLMLGHLKEVGEI 356
+ SYL LG K+ E+
Sbjct: 510 SGIGSYLSLGDYKKALEL 527
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 80/197 (40%), Gaps = 8/197 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y ALL YA +A E F+ +KQ+ + + Y ++ Y EK V E+
Sbjct: 367 SYNALLGAYASHGMHTEALETFKLLKQNGFKPDIVSYTSLLNAYGRSALPEKAREVFNEM 426
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
++ P+ +YN I + + + + L EM D D V ++ +TA
Sbjct: 427 RKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDGIQPD-----VISISTLLTACG 481
Query: 279 LVNAESS---TLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
+ L A+ Q + Y+ I Y LG+ K +++ S+R K +
Sbjct: 482 RCRQPTKIGIILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKALELYTSMRTGNVKPDAV 541
Query: 336 NYICILSSYLMLGHLKE 352
Y ++S LG ++
Sbjct: 542 TYNILISGSCKLGSFRK 558
>gi|297606902|ref|NP_001059180.2| Os07g0213300 [Oryza sativa Japonica Group]
gi|215767816|dbj|BAH00045.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677604|dbj|BAF21094.2| Os07g0213300 [Oryza sativa Japonica Group]
Length = 677
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 111/232 (47%), Gaps = 5/232 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+YT+LL+ Y + EKA E+F ++K+++ N + YN ++ Y S G +++ ++ E+
Sbjct: 260 SYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEM 319
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD-DWVKYVNLVNIYITAS 277
++ + PD+ + + +++C I +++ L+ + S G D + V Y + + Y++
Sbjct: 320 EKDGIQPDVVSISTLLAACGRCRQITRIETILE--AARSRGIDLNTVAYNSGIKSYLSFG 377
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
A +S + +TY+ LI + LG + + ++ + +K T Y
Sbjct: 378 DYEKA-LELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEVY 436
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
++ SY+ G L E K+S D+ L+ A++ G ++A
Sbjct: 437 SSLIYSYIKQGKLSEAESTFSSMKKSGCFP-DVLTYTTLIQAYNAGGGWKRA 487
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 106/254 (41%), Gaps = 15/254 (5%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
++ Y ++ LYA ++A LF +++ +A +YN ++ + GQ ++E
Sbjct: 11 NDIYGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIME 70
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
++ R + P TYN I++C A N + + +M+ + G D LV I
Sbjct: 71 DMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPD-------LVTHNIVL 123
Query: 277 SHLVNAESSTLVEAEKSITQRQWITYD-----FLIILYAGLGNKDKIDQIWKSLRMTKQK 331
S L N + + I + +T D +I +G + +++ S+R + K
Sbjct: 124 SALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTK 183
Query: 332 MTSR--NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
Y I+ SY + G ++ I D +I A N LLGA++ G+ +A
Sbjct: 184 CPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKP-NIVAYNSLLGAYASRGMHREA 242
Query: 390 NEFHMLLLQKNCAP 403
L+ + P
Sbjct: 243 LAIFNLIKKNGLRP 256
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 97/226 (42%), Gaps = 3/226 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT+++H Y E + +F+ + + N + YN ++ Y S G + + I
Sbjct: 190 TYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLI 249
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K+ + PDI +Y +++ + ++ ++ ++M +S + V Y L++ Y +A
Sbjct: 250 KKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNK-VSYNALIDAYGSAGM 308
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L A L E EK Q ++ L+ +I+ I ++ R + + Y
Sbjct: 309 LKEA-VGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYN 367
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 384
+ SYL G ++ E+ ++S D N L+ S +G
Sbjct: 368 SGIKSYLSFGDYEKALELYTSMRESNVKP-DAVTYNILISGSSKLG 412
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 159 TYTALLHLY-AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
TYT L+ Y AG W ++A +LF+ ++ + + +A++ + +M + G+ E+V ++E
Sbjct: 470 TYTTLIQAYNAGGGW-KRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLMEF 528
Query: 218 IKRKNVVPDIFTYNLWISSC 237
+K+K++ + +Y I+SC
Sbjct: 529 MKKKSIPLNQKSYFEIIASC 548
>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 107/249 (42%), Gaps = 11/249 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY LL+ EKAEE+ ++ ++ ++ + + YN ++ Y G V+K L E++
Sbjct: 327 TYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQM 386
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + + P+ T+N IS T +D + ++ M + G S Y +L+N Y H
Sbjct: 387 EERGLEPNRITFNTVISKFCETGEVDHAETWVRRM-VEKGVSPTVETYNSLINGYGQKGH 445
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK--IDQIWKSLRMTKQKMTSRN 336
V L E +K+ + I+Y LI KD+ ID M + ++
Sbjct: 446 FVRC-FEFLDEMDKAGIKPNVISYGSLINCLC----KDRKLIDAEIVLADMIGRGVSPNA 500
Query: 337 --YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 394
Y ++ + L LK+ D+ QS D + N L+ G +KA + +
Sbjct: 501 EIYNMLIEASCSLSKLKDAFRFFDEMIQSGI-DATLVTYNTLINGLGRNGRVKKAEDLFL 559
Query: 395 LLLQKNCAP 403
+ K C P
Sbjct: 560 QMAGKGCNP 568
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 105/246 (42%), Gaps = 12/246 (4%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y +L + + A +LF+ + Q N+ N + YN ++ Y VG +E+ E +K
Sbjct: 195 YNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMK 254
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
+NV ++ TYN ++ + +D ++ L EM ++ +V H
Sbjct: 255 EQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFV-------FDDHS 307
Query: 280 VNAESSTLVEA-EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
A L + E I +R TY L+ +G +K +++ L + +Y
Sbjct: 308 NGAGDDGLFDGKEIRIDER---TYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYN 364
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
++++Y G +K+ +Q ++ I+ N ++ F + G + A + +++
Sbjct: 365 ILVNAYCQEGDVKKAILTTEQMEERGLEPNRITF-NTVISKFCETGEVDHAETWVRRMVE 423
Query: 399 KNCAPT 404
K +PT
Sbjct: 424 KGVSPT 429
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 76/180 (42%), Gaps = 2/180 (1%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
+ T ETY +L++ Y + E + + ++ + N + Y ++ ++ +
Sbjct: 427 SPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEI 486
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
V+ ++ + V P+ YN+ I + + + +F DEM SG V Y L+N
Sbjct: 487 VLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEM-IQSGIDATLVTYNTLINGL 545
Query: 274 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
+ AE L A K ITY+ LI YA N K +++ +++ K T
Sbjct: 546 GRNGRVKKAEDLFLQMAGKGCNP-DVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPT 604
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 97/219 (44%), Gaps = 10/219 (4%)
Query: 171 KWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 230
K +K EL + + + + + YN ++ V +++ + +E+ ++N+VP+ TY
Sbjct: 171 KDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTY 230
Query: 231 NLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 290
N I I++ F + M + + V Y +L+N + S V+ L+E
Sbjct: 231 NTLIDGYCKVGGIEEALGFKERMK-EQNVECNLVTYNSLLN-GLCGSGRVDDAREVLLEM 288
Query: 291 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 350
E S ++ FL ++ N D ++ + ++ R Y +L+ +G +
Sbjct: 289 EGS----GFLPGGFLSFVFDDHSNGAGDDGLFDGKEI---RIDERTYCILLNGLCRVGRI 341
Query: 351 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
++ E++ + ++ + IS N L+ A+ G +KA
Sbjct: 342 EKAEEVLAKLVENGVTPSKISY-NILVNAYCQEGDVKKA 379
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 41/76 (53%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
Y +++ YA KA L +++ + + + YN ++ Y+ +V ++ +V+++
Sbjct: 641 VYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDM 700
Query: 219 KRKNVVPDIFTYNLWI 234
K K +VP + TYN+ I
Sbjct: 701 KAKGLVPKVDTYNILI 716
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 126/306 (41%), Gaps = 8/306 (2%)
Query: 103 RYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLS---AKTSET 159
R + ALE+ M YAT I K+ + + F+ + A ++
Sbjct: 162 RVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVM 221
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMM-TLYMSVGQVEKVALVVEEI 218
Y AL+ Y + A + E + Q ++ YN +M L+M + A V+EE+
Sbjct: 222 YNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYA-VLEEM 280
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
++ PD+FTYN+ I+ N + + +EMS G V Y +L+ ++
Sbjct: 281 QKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMS-QKGVRATAVTYTSLIYVFSRKGQ 339
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ + V +K I + + Y+ LI + G+ ++ +I + + Y
Sbjct: 340 VQETDRLFNVAVKKGI-RPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYN 398
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
++ + +LG L E +ID+ + D+ + N L+ +S G + A ++
Sbjct: 399 TLMRGFCLLGRLDEARTLIDEMTKRGIQP-DLVSYNTLISGYSMKGDIKDALRVRDEMMD 457
Query: 399 KNCAPT 404
K PT
Sbjct: 458 KGFNPT 463
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 58/112 (51%), Gaps = 1/112 (0%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y AL++ + E+A E+ +++ + + + YN +M + +G++++ +++E+
Sbjct: 362 YNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMT 421
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
++ + PD+ +YN IS + +I + DEM D G + + Y L+
Sbjct: 422 KRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEM-MDKGFNPTLMTYNALIQ 472
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 116/292 (39%), Gaps = 45/292 (15%)
Query: 150 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 209
LPL T L HL A K +A EL ++ + N A+ YN ++ + + G+V+
Sbjct: 112 LPLCTTTFNIM--LRHLCATGKPV-RALELLRQMPRPN----AVTYNTVIAGFCARGRVQ 164
Query: 210 KVALVVEEIK-RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM--------------- 253
V+ E++ R + PD +TY IS ++ K DEM
Sbjct: 165 AALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNA 224
Query: 254 ----SCDSGGSDDWVKY------------VNLVNIYITASHLVNAESS----TLVEAEKS 293
CD G D ++Y V N+ + A + +A +S L E +K+
Sbjct: 225 LIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFM-DARASDAYAVLEEMQKN 283
Query: 294 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 353
TY+ LI Y GN+ K ++++ + + T+ Y ++ + G ++E
Sbjct: 284 GFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQET 343
Query: 354 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 405
+ + + D+ N L+ + G E+A E + +K P +
Sbjct: 344 DRLFNVAVKKGIRP-DVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDD 394
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 108/258 (41%), Gaps = 11/258 (4%)
Query: 140 IHSGERYFEGLPLS---AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYN 196
+ S R+F+ + LS A TY L+ G ++A + ++ + NA+ YN
Sbjct: 138 LPSARRFFDSM-LSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYN 196
Query: 197 EMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCD 256
++ + G+V++ +V+ ++ + P++ T+N ++ ++ +K DEM
Sbjct: 197 TLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMV-K 255
Query: 257 SGGSDDWVKYVNLVNIY--ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 314
G + D V Y LV Y + SH S E + +T+ LI + GN
Sbjct: 256 EGLAPDGVSYNTLVGGYCKVGCSH---EALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGN 312
Query: 315 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 374
++ + + +R +M + ++ + G L + + + +Q + N
Sbjct: 313 LERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQP-SVVCYN 371
Query: 375 RLLGAFSDVGLTEKANEF 392
L+ + VG ++A E
Sbjct: 372 ALINGYCMVGRMDEAREL 389
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 84/194 (43%), Gaps = 6/194 (3%)
Query: 83 GNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDS-DYATRIDLMTKVFGIH 141
G + + ++ + K+ R + A ++ + MV KE + D Y T + KV H
Sbjct: 222 GLKPNLVTFNSVVNGICKAGRMEDARKVFDEMV--KEGLAPDGVSYNTLVGGYCKVGCSH 279
Query: 142 SGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMM 199
F + + T+T+L+H+ A E+A L +++ L N + + ++
Sbjct: 280 EALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALI 339
Query: 200 TLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG 259
+ G ++ L V E+++ + P + YN I+ +D+ ++ + EM G
Sbjct: 340 DGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREME-AKGV 398
Query: 260 SDDWVKYVNLVNIY 273
D V Y +++ Y
Sbjct: 399 KPDVVTYSTILSAY 412
>gi|414588908|tpg|DAA39479.1| TPA: chloroplast RNA splicing4 [Zea mays]
Length = 1438
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 124/284 (43%), Gaps = 7/284 (2%)
Query: 80 VSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFG 139
V +G +A+ E+ +++ + +S ++ AL+ EW+ + + A + ++ +
Sbjct: 147 VLDGARASPDEVAFVVRAVGESS-WRRALDAFEWLA--RSSAPASRAVAVVLGVLGRARQ 203
Query: 140 IHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMM 199
E F T + + A++ +YA + + A +L + + + + + +N ++
Sbjct: 204 DSIAEEVFLRFAGEGATVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLI 263
Query: 200 TLYMSVGQVEK-VAL-VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 257
G + VAL ++ E+++ + PD+ TYN IS+C+ + N++ ++M
Sbjct: 264 NARSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASE 323
Query: 258 GGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 317
D W Y +V+++ AE EK ITY+ L+ +A GN DK
Sbjct: 324 CRPDLWT-YNAMVSVHGRCGKAEEAERLFRELVEKGFMP-DAITYNSLLYAFAKEGNVDK 381
Query: 318 IDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 361
++ + L K Y ++ Y +G L + D+ +
Sbjct: 382 VEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMR 425
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 106/243 (43%), Gaps = 11/243 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +LL+ +A +K E E++ ++ N + YN M+ +Y +G+++ + +E+
Sbjct: 365 TYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEM 424
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ PD TY + I S I + K L++M+ D+G + + L+ Y
Sbjct: 425 RAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMT-DAGLKPTLIAFSALICAYAKGGR 483
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+AE +T S + + Y ++ ++A G+ +K+ +++ + + Y
Sbjct: 484 RADAE-NTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKMLCLYRKMMNDNYRPDDDMYQ 542
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
+L + +E+ E+I D ++ C LG S + + + LL+
Sbjct: 543 VLLVALAKEDKCEEIEEVI--------QDMEL-LCRMNLGIISTMLIKARCVSQGAKLLK 593
Query: 399 KNC 401
K C
Sbjct: 594 KAC 596
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 75/186 (40%), Gaps = 2/186 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY A++ ++ E+AE LF + + +A+ YN ++ + G V+KV E++
Sbjct: 330 TYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQL 389
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + TYN I +D DEM G + D V Y +++ +
Sbjct: 390 VKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRA-MGCTPDAVTYTVMIDSLGKMNR 448
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ A L + + + I + LI YA G + + + + + K Y+
Sbjct: 449 IAEA-GKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYL 507
Query: 339 CILSSY 344
+L +
Sbjct: 508 VMLDVF 513
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 115/292 (39%), Gaps = 46/292 (15%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSD-SDYATR 130
A V R+ EG ATV ++ +S R+ A ++ + M H + D + T
Sbjct: 207 AEEVFLRFAGEG--ATVQVFNAMMGVYARSGRFDDARQLLDTM--HDRGIDPDLVSFNTL 262
Query: 131 IDLMTKVFGIHSG---ERYFEGLPLSAKTSE-TYTALLHLYAGAKWTEKAEELFERVKQS 186
I+ +K + +G + FE + TY L+ + + E A +FE + S
Sbjct: 263 INARSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIAS 322
Query: 187 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 246
+ YN M++++ G+ E+ + E+ K +PD TYN + + A N+D+V
Sbjct: 323 ECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKV 382
Query: 247 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI 306
+ T LV K+ ++ ITY+ +I
Sbjct: 383 EH--------------------------TCEQLV-----------KAGFKKNEITYNTMI 405
Query: 307 ILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 358
+Y +G D ++ +R + Y ++ S + + E G++++
Sbjct: 406 HMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLE 457
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/187 (19%), Positives = 86/187 (45%), Gaps = 2/187 (1%)
Query: 162 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 221
ALL++Y A ++ +++ + ++ L + YN ++ +Y + E+ ++ E+ ++
Sbjct: 925 ALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKR 984
Query: 222 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 281
+ P + +Y +++ A +Q + +EM S + + Y ++ IY A +
Sbjct: 985 GLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSI-YHMMMKIYRNAGNHSK 1043
Query: 282 AESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICIL 341
AE+ V E I + T L+ Y G + + + +L+ + ++++ Y +
Sbjct: 1044 AENLLAVMKEDGI-EPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVSTLPYSTVF 1102
Query: 342 SSYLMLG 348
+YL G
Sbjct: 1103 DAYLKNG 1109
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 79/166 (47%), Gaps = 2/166 (1%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
+ AL+H YA + EKA +F+ + ++ N MM + G+++++ +VVEE++
Sbjct: 783 WNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQ 842
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
N T L + + A ++ +V K + M +G + Y +++++ +
Sbjct: 843 DMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKA-AGYLPNMHLYRSMISLLCHHNRF 901
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 325
+ E + E E + + + L+ +Y GN D+ Q+++S+
Sbjct: 902 RDVE-LMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSI 946
>gi|297797974|ref|XP_002866871.1| EMB2453 [Arabidopsis lyrata subsp. lyrata]
gi|297312707|gb|EFH43130.1| EMB2453 [Arabidopsis lyrata subsp. lyrata]
Length = 561
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 128/308 (41%), Gaps = 11/308 (3%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGL--- 150
+ +EL KS ++ LE+ WM + ++ + Y+ I +M K F +
Sbjct: 103 LFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNS 162
Query: 151 ---PLSAKTSETYTALLHLYAGAKWTEKAEELFERVK-QSNLSFNALMYNEMMTLYMSVG 206
P ++ + TA LH AK EK F+++K N + YN ++ + G
Sbjct: 163 GCRPDASVYNALITAHLHTRDKAKALEKVRGYFDKMKGMERCQPNVVTYNILLRAFAQSG 222
Query: 207 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 266
+V++V + +++ V PD++T+N + + I +++ L M + D + +
Sbjct: 223 KVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKP-DIITF 281
Query: 267 VNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 326
L++ Y E T +S + T++ +II Y DK + ++K +
Sbjct: 282 NVLIDSYGKKQEFEKME-QTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMN 340
Query: 327 MTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLT 386
+ Y C++ Y G + EI ++ S S N +L + GL
Sbjct: 341 DMNYMPSFITYECMIMMYGYCGSVSRAREIFEEVVDSERV-LKASTLNAMLEVYCRNGLY 399
Query: 387 EKANE-FH 393
+A++ FH
Sbjct: 400 MEADKLFH 407
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 97/206 (47%), Gaps = 2/206 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+ +KA +L++ + + N + Y+ ++ + GQVE ++E+
Sbjct: 377 TYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEM 436
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K ++P+I TYN I + N+ + +KFL +M + S D + Y L++ YI
Sbjct: 437 INKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK-VSPDLITYNTLIHGYIKEDK 495
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ +A L EK Q +TY+ LI ++ GN + I++ + + Y+
Sbjct: 496 MHDA-FKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYM 554
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSA 364
+++ ++ G+ KE ++ D+ Q
Sbjct: 555 SMINGHVTAGNSKEAFQLHDEMLQRG 580
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 59/340 (17%), Positives = 133/340 (39%), Gaps = 16/340 (4%)
Query: 71 SATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDS--DYA 128
+A ++ VS+G + + +LK L +S + A E+ + M +F ++ +
Sbjct: 148 AAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEM---DDFGVAPDVRSFT 204
Query: 129 TRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQS 186
I +V I + ++ + + +++ L+ L+A + A ++
Sbjct: 205 ILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCF 264
Query: 187 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 246
L + ++Y ++ + G + V +E+ +PD+ TYN ++ +
Sbjct: 265 GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA 324
Query: 247 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR---QWITYD 303
+ L+EM + G D + L++ Y L A L + + QR +TY+
Sbjct: 325 EGLLNEMR-ERGVPPDLCTFTTLIHGYCIEGKLDKA----LQLFDTMLNQRLRPDIVTYN 379
Query: 304 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 363
LI G+ DK + +W + + Y ++ S+ G +++ +D+
Sbjct: 380 TLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINK 439
Query: 364 ATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
+I N ++ + G K +F ++ +P
Sbjct: 440 GILP-NIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSP 478
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 44/234 (18%), Positives = 89/234 (38%), Gaps = 3/234 (1%)
Query: 170 AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFT 229
A W A + + V SN N N M+ Y + +KV V+ E++++ V PD+ T
Sbjct: 73 AGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVT 132
Query: 230 YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVE 289
+N+ + + + + +D M S G + N V + S + + E
Sbjct: 133 HNVMVDARFRAGDAEAAMALVDSMV--SKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKE 190
Query: 290 AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGH 349
+ ++ LI + +G ++ +I+K +R K ++ C++ + G
Sbjct: 191 MDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGK 250
Query: 350 LKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
+ + + + D ++G F GL A ++ C P
Sbjct: 251 MDHAMAYLREMRCFGLVP-DGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLP 303
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 46/244 (18%), Positives = 98/244 (40%), Gaps = 7/244 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY LL+ + AE L +++ + + + ++ Y G+++K + + +
Sbjct: 307 TYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTM 366
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + PDI TYN I ++D+ D+M + V Y L++ +
Sbjct: 367 LNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSRE-IFPNHVTYSILIDSHCEKGQ 425
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ +A K I +TY+ +I Y GN K + + + + K Y
Sbjct: 426 VEDAFGFLDEMINKGILP-NIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYN 484
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
++ Y+ + + ++++ ++ D+ N L+ FS G ++A + +
Sbjct: 485 TLIHGYIKEDKMHDAFKLLNMMEKEKVQP-DVVTYNMLINGFSVHGNVQEAG----WIFE 539
Query: 399 KNCA 402
K CA
Sbjct: 540 KMCA 543
>gi|356528730|ref|XP_003532952.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g73710-like [Glycine max]
Length = 963
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 107/239 (44%), Gaps = 3/239 (1%)
Query: 151 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 210
P + S TY L+ LY A +A E+F + ++ ++ + +N M+ + S G + +
Sbjct: 265 PQKPRLSNTYNVLIDLYGKAGRLSEAAEVFAEMLKAGVAVDVWTFNTMIFVCGSQGDLAE 324
Query: 211 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 270
++ ++ K V PD T+N+++S A +I + ++G D V Y L+
Sbjct: 325 AEALLGMMEEKGVAPDTKTFNIFLSLYAEARDIGAAVLCYKRIR-EAGLCPDEVTYRALL 383
Query: 271 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 330
+ + ++V + E E++ ++ +Y G G+ DK + K ++ +
Sbjct: 384 GV-LCRKNMVREVEDLIDEMERAFVSVDEHCVPGIVEMYVGEGDVDKAFDLLKKFQVNGE 442
Query: 331 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
M+S I+ + G +E ++ + + A D+ CN ++ A+ L +KA
Sbjct: 443 -MSSNIRSAIMDVFAEKGLWEEAEDVFYRGRNLAGRKRDVLECNVMIKAYGKAKLYDKA 500
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 104/238 (43%), Gaps = 10/238 (4%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQ-SNLSFNALMYNEMMTLYMSVGQVEKVALV 214
+S +A++ ++A E+AE++F R + + + L N M+ Y +K +
Sbjct: 444 SSNIRSAIMDVFAEKGLWEEAEDVFYRGRNLAGRKRDVLECNVMIKAYGKAKLYDKAISL 503
Query: 215 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274
+ +K P+ TYN + + +DQ +DEM + G + ++ Y
Sbjct: 504 FKGMKNHGTWPNESTYNSLVQMLSGADLVDQAMDLVDEMQ-EVGFKPPCQTFSAVIGCYA 562
Query: 275 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 334
L +A S E ++ + + Y LI G +++ K M ++ S
Sbjct: 563 RLGQLSDA-VSVFKEMVRTGVKPNEVVYGSLI---NGFAEHGSLEEALKYFHMMEESGLS 618
Query: 335 RNYIC---ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
N + +L SY +G+L+ I ++ K + D+ ACN ++G F+D+GL +A
Sbjct: 619 SNLVVLTSLLKSYCKVGNLEGAKAIYERMK-NMEGGLDLVACNSMIGLFADLGLVSEA 675
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 112/250 (44%), Gaps = 21/250 (8%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +L+ + +GA ++A +L + +++ ++ ++ Y +GQ+ V +E+
Sbjct: 518 TYNSLVQMLSGADLVDQAMDLVDEMQEVGFKPPCQTFSAVIGCYARLGQLSDAVSVFKEM 577
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
R V P+ Y I+ A ++++ K+ M +SG S + V +L+ Y +
Sbjct: 578 VRTGVKPNEVVYGSLINGFAEHGSLEEALKYFHMME-ESGLSSNLVVLTSLLKSYCKVGN 636
Query: 279 LVNAESSTLVEAEKSITQR--------QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 330
L E K+I +R + + +I L+A LG + +++LR
Sbjct: 637 L---------EGAKAIYERMKNMEGGLDLVACNSMIGLFADLGLVSEAKLAFENLR-EMG 686
Query: 331 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 390
+ + +Y I+ Y +G + E EI ++ K S D + N++L ++ G +
Sbjct: 687 RADAISYATIMYLYKGVGLIDEAIEIAEEMKLSGLLR-DCVSYNKVLVCYAANGQFYECG 745
Query: 391 EF-HMLLLQK 399
E H ++ QK
Sbjct: 746 ELIHEMISQK 755
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/207 (19%), Positives = 89/207 (42%), Gaps = 16/207 (7%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y +++LY G ++A E+ E +K S L + + YN+++ Y + GQ + ++ E+
Sbjct: 692 SYATIMYLYKGVGLIDEAIEIAEEMKLSGLLRDCVSYNKVLVCYAANGQFYECGELIHEM 751
Query: 219 KRKNVVPDIFTYNLWIS----SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY- 273
+ ++P+ T+ + + T + Q++ E + + +Y
Sbjct: 752 ISQKLLPNDGTFKVLFTILKKGGIPTEAVAQLESSYQE-------GKPYARQTTFTALYS 804
Query: 274 ITASHLVNAESS-TLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 332
+ H + ES+ T +E+E + ++ I Y G+ +K I+ +R
Sbjct: 805 LVGMHNLALESAQTFIESEVDLDSS---AFNVAIYAYGSAGDINKALNIYMKMRDEHLGP 861
Query: 333 TSRNYICILSSYLMLGHLKEVGEIIDQ 359
YI ++ Y G ++ V +I Q
Sbjct: 862 DLVTYIYLVGCYGKAGMVEGVKQIYSQ 888
>gi|302821471|ref|XP_002992398.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
gi|300139814|gb|EFJ06548.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
Length = 698
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+ YA A ++ E L++ ++ ++ N MY M+T+Y GQ +K ++ E+
Sbjct: 354 TYCLLIDAYARAGLMDRLEALYQEMRDCDIRPNTYMYARMITIYRDTGQWQKGVKLLREM 413
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
++ V PD YN+ I++ T ++Q + +M D G D V + +L++ A
Sbjct: 414 QQAGVTPDAHVYNVIINTFGRTRQLEQARIAFFKMQ-DGGIEPDVVSWNSLIDACCKAGQ 472
Query: 279 LVNA 282
+ A
Sbjct: 473 PLEA 476
Score = 41.2 bits (95), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 36/184 (19%), Positives = 74/184 (40%), Gaps = 3/184 (1%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
A + + V++G T ++ L + +R+ E+ E M + F + Y T +
Sbjct: 476 ARKLYYKMVNDGCAPTAQTFNIVIHGLGEHKRWNDVNEMVEEMRSKGMFP-NVVTYTTLV 534
Query: 132 DLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLS 189
D+ + + + + Y+AL + YA E+ + + +++ N+
Sbjct: 535 DVYAQARLFQDAVECLQTMKEDGMGPSPTAYSALANAYAQLGMCEQTLHVLQTMEKENIE 594
Query: 190 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 249
N M N ++ + G+ ++ V E IK + D TY + + +D+V
Sbjct: 595 INLAMLNLLINAFSMAGRSQEAFAVFEYIKEAGLTADKITYTTLMKALIRAEKLDEVSGV 654
Query: 250 LDEM 253
DEM
Sbjct: 655 FDEM 658
Score = 41.2 bits (95), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 109/276 (39%), Gaps = 17/276 (6%)
Query: 137 VFGIHSGERYF-----EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFN 191
V I++G R F EG+ + K Y L+ A + E+++ S L +
Sbjct: 225 VVDIYTGFRLFQEMQAEGVQVDGKV---YNDLIFACGQAHKPNEGMFFLEKLQASGLVAD 281
Query: 192 ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI---SSCAATLNIDQVKK 248
Y +M G+ + ++EE+K + P++ YN + S ID VK
Sbjct: 282 RDSYISLMLSLGKHGRTAEAEALLEEMKWYGLRPNLKAYNTLLGGYSRKGQLQQIDTVKT 341
Query: 249 FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIIL 308
L D+G S + + Y L++ Y A L++ + E + Y +I +
Sbjct: 342 LLR----DTGMSINKITYCLLIDAYARAG-LMDRLEALYQEMRDCDIRPNTYMYARMITI 396
Query: 309 YAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDF 368
Y G K ++ + ++ + Y I++++ L E I Q +
Sbjct: 397 YRDTGQWQKGVKLLREMQQAGVTPDAHVYNVIINTFGRTRQL-EQARIAFFKMQDGGIEP 455
Query: 369 DISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 404
D+ + N L+ A G +A + + ++ CAPT
Sbjct: 456 DVVSWNSLIDACCKAGQPLEARKLYYKMVNDGCAPT 491
>gi|302799860|ref|XP_002981688.1| hypothetical protein SELMODRAFT_115229 [Selaginella moellendorffii]
gi|300150520|gb|EFJ17170.1| hypothetical protein SELMODRAFT_115229 [Selaginella moellendorffii]
Length = 289
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 109/237 (45%), Gaps = 10/237 (4%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG-QVEKVAL 213
K + Y ALLH + A E ++LF +KQS + N L YN +M Y+ G ++ KV
Sbjct: 44 KDAGMYNALLHAFCKAGKLEAVDDLFRDMKQS-IRPNHLSYNILMHSYVKAGHELTKVVS 102
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
V +E+ + V + +YN+ I++CA + + F M + + Y +L+N+Y
Sbjct: 103 VFKEMYLRGVKASVASYNILIAACATGKQAWEARVFFSNMK-KQDLEPNVITYSSLINVY 161
Query: 274 ITASHLVNAESS--TLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 331
+ + + N ++ L E K+ T+ L+ Y G ++ +I+++++ +
Sbjct: 162 VASGDVGNCAAALDVLREMVKAEVMPNVTTFSCLLHGYGQEGKIEEAMKIFQTMKDLGIE 221
Query: 332 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA-----TSDFDISACNRLLGAFSDV 383
++ + +++ Y GH + +S S + C + +GA+ +V
Sbjct: 222 PSAITFNILMTMYSKSGHHALAQSCFHEMIESGLEPTYVSFLSLMYCFKSVGAYKEV 278
>gi|255582522|ref|XP_002532046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528289|gb|EEF30336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 478
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 122/307 (39%), Gaps = 44/307 (14%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTK---------VFG----- 139
+ +EL + ++ LE+ WM + ++ Y+ I +M K +F
Sbjct: 102 LFEELGRRDKWLQCLEVFRWMQKQRWYIADSGVYSKLISVMGKKGQTRMAMWLFSEMRNS 161
Query: 140 ----------------IHSGER---------YFE---GLPLSAKTSETYTALLHLYAGAK 171
+HS ++ YFE G+ TY LL +A A+
Sbjct: 162 GCRPDSSVYNALITAHLHSKDKAKALIKALGYFEKMKGMQRCQPNVVTYNILLRAFAQAR 221
Query: 172 WTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYN 231
+ LF+ + QS +S + YN +M Y G + ++ V+ +K PDI T+N
Sbjct: 222 NVNQVNALFKDLDQSIVSPDIYTYNGVMDAYGKNGMIREMESVLSRMKSNQCKPDIITFN 281
Query: 232 LWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE 291
L I S + D++++ + S + +++ Y A NAE S L +
Sbjct: 282 LLIDSYGKKQDFDKMEQVFKSL-LHSKERPTLPTFNSMITNYGKARQKENAE-SVLQKMT 339
Query: 292 KSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLK 351
K +ITY+ LI++Y + K +I+ + + +++ +L Y + G
Sbjct: 340 KMKYTPNFITYESLIMMYGFCDSVSKAREIFDDMIESGKEVKVSTLNAMLDVYCLNGLPM 399
Query: 352 EVGEIID 358
E + D
Sbjct: 400 EADLLFD 406
>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/340 (19%), Positives = 138/340 (40%), Gaps = 18/340 (5%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
A N ++ +S G ++ L K RY A ++ M++ + F SD +
Sbjct: 402 AENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLS-RNFRPSD------L 454
Query: 132 DLMTKVFGIHSGERYFEGLPL--------SAKTSETYTALLHLYAGAKWTEKAEELFERV 183
L V G+ ++ E L S + T AL+H GA +A + + +
Sbjct: 455 LLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEM 514
Query: 184 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 243
+ L + + YN ++ + + G+VE + EE+ ++ + PDI+TYN + +
Sbjct: 515 LERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKL 574
Query: 244 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 303
D K DE SG + Y ++ Y A+ + + E + E + I Y+
Sbjct: 575 DDAIKLWDEFK-ASGLISNIHTYGIMMEGYCKANRIEDVE-NLFNELLSKKMELNSIVYN 632
Query: 304 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 363
+I + GN Q+ ++++ Y ++ +G +++ +ID+ ++
Sbjct: 633 IIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKE 692
Query: 364 ATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
++ L+G + +G + A + ++ N P
Sbjct: 693 GFVP-NVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHP 731
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
YTAL+ Y + AE + + N+ N Y M+ Y +G +EK ++ ++K
Sbjct: 701 YTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMK 760
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
+VPD+ TYN+ + ++D K D+M+ + G D + Y LV+
Sbjct: 761 ESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATE-GLPVDEITYTTLVH 811
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY++L+H E A+ L + +++ N + Y ++ Y +GQ++ E+
Sbjct: 665 TYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEM 724
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
N+ P+ FTY + I N+++ L +M +SG D V Y L N + A+
Sbjct: 725 ISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMK-ESGIVPDVVTYNVLTNGFCKAND 783
Query: 279 LVNA 282
+ NA
Sbjct: 784 MDNA 787
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/224 (19%), Positives = 80/224 (35%), Gaps = 38/224 (16%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
TY ++ Y A E E LF + + N+++YN ++ + G V ++E
Sbjct: 594 HTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLEN 653
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
+K K ++P+ TY+ I ++ K +DEM + +V V
Sbjct: 654 MKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMR-----KEGFVPNV---------- 698
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
+ Y LI Y LG D + W + Y
Sbjct: 699 ----------------------VCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTY 736
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFS 381
++ Y LG++++ ++ + K+S D+ N L F
Sbjct: 737 TVMIDGYCKLGNMEKANNLLIKMKESGIVP-DVVTYNVLTNGFC 779
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 75/167 (44%), Gaps = 5/167 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
++T +++ E A ELF ++++ +S N + YN ++ G+++ + E++
Sbjct: 245 SFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKM 304
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K V P++ TY I+ D+V LDEM SG + + V + NL++ Y +
Sbjct: 305 TVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMI-GSGFNPNVVVFNNLIDGYCKMGN 363
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 325
+ A V K+IT Y L G D+I+ +L
Sbjct: 364 IEGALKIKDVMISKNITPTSVTLYS----LMQGFCKSDQIEHAENAL 406
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 82/197 (41%), Gaps = 18/197 (9%)
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
+ RK P + T N +SS ++ + MS G D + N++N
Sbjct: 200 LARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMS--EGACPDVFSFTNVINALCKGG 257
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN- 336
+ NA ++ EK +TY+ +I GL ++D ++ K+KMT +
Sbjct: 258 KMENA-IELFMKMEKLGISPNVVTYNCII---NGLCQNGRLDNAFE----LKEKMTVKGV 309
Query: 337 ------YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 390
Y +++ + L +V ++D+ S + ++ N L+ + +G E A
Sbjct: 310 QPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNP-NVVVFNNLIDGYCKMGNIEGAL 368
Query: 391 EFHMLLLQKNCAPTNAS 407
+ +++ KN PT+ +
Sbjct: 369 KIKDVMISKNITPTSVT 385
>gi|302768815|ref|XP_002967827.1| hypothetical protein SELMODRAFT_88115 [Selaginella moellendorffii]
gi|300164565|gb|EFJ31174.1| hypothetical protein SELMODRAFT_88115 [Selaginella moellendorffii]
Length = 289
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 109/237 (45%), Gaps = 10/237 (4%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG-QVEKVAL 213
K + Y ALLH + A E ++LF +KQS + N L YN +M Y+ G ++ KV
Sbjct: 44 KDAGMYNALLHAFCKAGKLEAVDDLFRDMKQS-IRPNHLSYNILMHSYVKAGHELTKVVS 102
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
V +E+ + V + +YN+ I++CA + + F M + + Y +L+N+Y
Sbjct: 103 VFKEMYLRGVKASVASYNILIAACATGKQAWEARVFFSNMK-KQDLEPNVITYSSLINVY 161
Query: 274 ITASHLVNAESS--TLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 331
+ + + N ++ L E K+ T+ L+ Y G ++ +I+++++ +
Sbjct: 162 VASGDVGNCAAALDVLREMVKAEVMPNVTTFSCLLHGYGQEGRIEEAMKIFQTMKDLGIE 221
Query: 332 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA-----TSDFDISACNRLLGAFSDV 383
++ + +++ Y GH + +S S + C + +GA+ +V
Sbjct: 222 PSAITFNILMTMYSKSGHHALAQSCFHEMIESGLEPTYVSFLSLMYCFKSVGAYKEV 278
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/338 (20%), Positives = 140/338 (41%), Gaps = 22/338 (6%)
Query: 76 IQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWM--------VTHKEFVLSDSDY 127
I R +S+ + + L ++ +KS R + A E+ M + +L D
Sbjct: 162 IHRALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLR 221
Query: 128 ATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN 187
A + L+ KV + G +S TY+ L+ Y + + A+++ +++
Sbjct: 222 ADAMALLWKV------REFMVGAGISPDVY-TYSTLIEAYCKVREFDTAKKVLVEMRERG 274
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 247
N + YN ++ G VE+ ++++ +VPD FTY I+ + ++ K
Sbjct: 275 CGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAK 334
Query: 248 KFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESS--TLVEAEKSITQRQWITYDFL 305
LDEMSC + + V Y NL++ ++ NA+ + + E + Q ITYD L
Sbjct: 335 ALLDEMSC-AELKPNVVVYANLIDGFMREG---NADEAFKMIKEMVAAGVQPNKITYDNL 390
Query: 306 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 365
+ +G D+ + K + + + Y I+ + K+ ++ + + +
Sbjct: 391 VRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGI 450
Query: 366 SDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
S ++ + ++ G EKA++ + K P
Sbjct: 451 SP-NVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKP 487
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY+ ++H + EKA +L E + L NA +Y +++ Y G V + +++
Sbjct: 456 TYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKM 515
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ NV+PD++ YN I + +++ K+ +M + G + Y L++ Y+
Sbjct: 516 TKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQ-ERGLLPNEFTYSGLIHGYLKNGD 574
Query: 279 LVNAE 283
L +AE
Sbjct: 575 LESAE 579
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 52/131 (39%), Gaps = 35/131 (26%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVA------ 212
TY+ L+H Y E AE+L +R+ + L N ++Y +++ Y +EKV+
Sbjct: 561 TYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 620
Query: 213 -----------------------------LVVEEIKRKNVVPDIFTYNLWISSCAATLNI 243
V+ I++ VPD+ Y+ IS T +
Sbjct: 621 LDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADR 680
Query: 244 DQVKKFLDEMS 254
++ LDEMS
Sbjct: 681 EKAFGILDEMS 691
>gi|345288455|gb|AEN80719.1| AT1G07590-like protein, partial [Capsella rubella]
gi|345288457|gb|AEN80720.1| AT1G07590-like protein, partial [Capsella rubella]
gi|345288459|gb|AEN80721.1| AT1G07590-like protein, partial [Capsella rubella]
gi|345288461|gb|AEN80722.1| AT1G07590-like protein, partial [Capsella rubella]
gi|345288463|gb|AEN80723.1| AT1G07590-like protein, partial [Capsella rubella]
gi|345288465|gb|AEN80724.1| AT1G07590-like protein, partial [Capsella rubella]
gi|345288467|gb|AEN80725.1| AT1G07590-like protein, partial [Capsella rubella]
gi|345288469|gb|AEN80726.1| AT1G07590-like protein, partial [Capsella rubella]
Length = 195
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 3/164 (1%)
Query: 193 LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 252
L+YN ++ + G+ + +A + +K +P + TY++ + A NID V K D
Sbjct: 22 LVYNRLIIRNSAPGRRKLIAKDLALMKADKAIPHVSTYHILMKLEANEHNIDGVLKAFDG 81
Query: 253 MSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL 312
M +G + V Y L + A AE+ T E EKS+T W T D L+ILY L
Sbjct: 82 MK-KAGVEPNEVSYCILAMAHAVARLYTVAEAYT-EEIEKSVTGDNWSTLDILMILYGRL 139
Query: 313 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 356
G + ++ + W +R + S++Y+ ++ +G+L E+
Sbjct: 140 GKEKELARTWNVIR-GFHHVRSKSYLLATEAFARVGNLDRAEEL 182
>gi|168012346|ref|XP_001758863.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690000|gb|EDQ76369.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 367
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 103/235 (43%), Gaps = 3/235 (1%)
Query: 173 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 232
E AE++F ++K++ + YN ++++ G E+ + E++R VVP+I T+N
Sbjct: 97 VETAEKIFSKIKENGILPRVETYNTLLSVLSRGGHTERCKELEIEMQRLEVVPNIITFNT 156
Query: 233 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 292
+ + + + + D+G V Y LV +Y AS A +E +
Sbjct: 157 LLMMHVQGGRLKEAAEVYQRI-LDAGLKPTVVTYTGLVQMYCRASKHKEA-IEVFLEMRR 214
Query: 293 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 352
+ + Y +I +Y G+ ++ +++ L+ + C++ ++ G ++E
Sbjct: 215 VGCKPDLMIYSLMISVYGKAGSAEEAALVFRQLQNDGYIPNVVTWCCLIQAFGWQGKMQE 274
Query: 353 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
+G ++ S D++ N ++GA+ G + +A + + +P S
Sbjct: 275 IGAFFNEMLASGCLP-DLTLYNVMMGAYGRYGHSVQAAILFRRMQAQGISPNAVS 328
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
T TYT L+ +Y A ++A E+F +++ + ++Y+ M+++Y G E+ ALV
Sbjct: 184 PTVVTYTGLVQMYCRASKHKEAIEVFLEMRRVGCKPDLMIYSLMISVYGKAGSAEEAALV 243
Query: 215 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274
+++ +P++ T+ I + + ++ F +EM SG D Y ++ Y
Sbjct: 244 FRQLQNDGYIPNVVTWCCLIQAFGWQGKMQEIGAFFNEM-LASGCLPDLTLYNVMMGAYG 302
Query: 275 TASHLVNA 282
H V A
Sbjct: 303 RYGHSVQA 310
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 99/211 (46%), Gaps = 2/211 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+ +KA +L++ + + N + Y+ ++ + GQVE ++E+
Sbjct: 123 TYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEM 182
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K ++P+I TYN I + N+ + +KFL +M + S D + Y L++ YI
Sbjct: 183 INKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK-VSPDLITYNTLIHGYIKEDK 241
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ +A L EK Q +TY+ LI ++ GN + I++ + + Y+
Sbjct: 242 MHDA-FKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYM 300
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFD 369
+++ ++ G+ KE ++ D+ Q + D
Sbjct: 301 SMINGHVTAGNSKEAFQLHDEMLQRGFAPDD 331
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 54/283 (19%), Positives = 111/283 (39%), Gaps = 40/283 (14%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY LL+ + AE L +++ + + + ++ Y G+++K + + +
Sbjct: 53 TYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTM 112
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM------------------SCDSGGS 260
+ + PDI TYN I ++D+ D+M C+ G
Sbjct: 113 LNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQV 172
Query: 261 DDWVKYVN-------LVNIYITASHLVNAESSTLVEAEKSITQRQW--------ITYDFL 305
+D +++ L NI S + S V + Q+ ITY+ L
Sbjct: 173 EDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTL 232
Query: 306 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQWKQ 362
I Y +DK+ +K L M +++ + Y +++ + + G+++E G I ++
Sbjct: 233 IHGYI---KEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCA 289
Query: 363 SATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 405
D ++ G +++A + H +LQ+ AP +
Sbjct: 290 KGIEP-DRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDD 331
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 23/116 (19%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Query: 140 IHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 197
+ G+++ + + ++ + + TY L+H Y A +L +++ + + + YN
Sbjct: 207 VSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNM 266
Query: 198 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
++ + G V++ + E++ K + PD +TY I+ N + + DEM
Sbjct: 267 LINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEM 322
>gi|224113413|ref|XP_002316488.1| predicted protein [Populus trichocarpa]
gi|222865528|gb|EEF02659.1| predicted protein [Populus trichocarpa]
Length = 941
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 92/207 (44%), Gaps = 6/207 (2%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y +++ Y A ++AE L +++ + +Y+ MM Y + EK +V + +K
Sbjct: 402 YGNIIYAYCQACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLK 461
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLD--EMSCDSGGSDDWVKYVNLVNIYITAS 277
P + TY I+ I +V K L+ +M G + Y L+N ++
Sbjct: 462 ECGFAPSVITYGCLIN---MYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLK 518
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
NA + + K + + Y+ +I + G+GN D+ + K ++ + + TSR +
Sbjct: 519 DWTNA-FAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTF 577
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSA 364
+ I+ + G ++ EI D ++S
Sbjct: 578 MPIIHGFARAGEMRRALEIFDMMRRSG 604
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 82/187 (43%), Gaps = 2/187 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT ++H YA T KA E F +++ L + Y ++ G+++ V E+
Sbjct: 646 TYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSALAVTREM 705
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + + F YN+ I A +I + + +M+ G D Y + +N A
Sbjct: 706 NAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQMN-QEGVQPDIHTYTSFINACCKAGD 764
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
++ A + T+ E E + + TY LI +A +K ++ L++ K Y
Sbjct: 765 MLRA-TKTMEEMEAAGVKPNVKTYTTLIHGWANASLPEKALSCFEELKLAGLKPDKAVYH 823
Query: 339 CILSSYL 345
C+++S L
Sbjct: 824 CLMTSLL 830
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/296 (19%), Positives = 124/296 (41%), Gaps = 20/296 (6%)
Query: 116 THKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWT 173
+ +EF L YA R D+ H + FE + +S YT+L+H YA +
Sbjct: 293 SRREFGLMVGYYARRGDM-------HRARQTFESMRARGIDPSSHVYTSLIHAYAVGRDM 345
Query: 174 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 233
E+A ++ + + + + Y+ ++ + G E ++ K ++ + + Y
Sbjct: 346 EEALSCVRKMNEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNI 405
Query: 234 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV--EAE 291
I + N+D+ + + EM + G Y +++ Y + + N E +V +
Sbjct: 406 IYAYCQACNMDRAEALVREME-EEGIDAPLDIYHTMMDGY---TMIRNEEKCLIVFKRLK 461
Query: 292 KSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLK 351
+ ITY LI +Y +G K ++ K ++ K + Y +++ +L L
Sbjct: 462 ECGFAPSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWT 521
Query: 352 EVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML--LLQKNCAPTN 405
+ + + D+ N ++ AF +G ++A HM+ + ++ C PT+
Sbjct: 522 NAFAVFEDVIKDGLKP-DVVLYNNIIKAFCGMGNMDRA--IHMVKEMQKERCRPTS 574
Score = 41.2 bits (95), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 77/175 (44%), Gaps = 8/175 (4%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
TS T+ ++H +A A +A E+F+ +++S +N ++ + ++EK ++
Sbjct: 573 TSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEIL 632
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275
+E+ V PD TY + AA + + ++ +M + G D Y L+
Sbjct: 633 DEMALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMR-NEGLQLDVFTYEALLKACCK 691
Query: 276 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 330
+ + +A + T E R Y+ LI +A G+ IW++ + +Q
Sbjct: 692 SGRMQSALAVTR-EMNAQKIPRNTFVYNILIDGWARRGD------IWEAADLMQQ 739
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 86/195 (44%), Gaps = 2/195 (1%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
YTAL+ Y A E A LF+R+ N++ +N M+ G+V+ L+VE+
Sbjct: 501 HAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVED 560
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
+ + +V P + TYN+ + + D+ + L+ + SG + V Y + Y +
Sbjct: 561 MAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLI-SSGYQPNVVTYTAFIKAYCSQG 619
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
L AE + + + +I Y+ LI Y +G D + + + T + + Y
Sbjct: 620 RLEEAEEMVIKIKNEGVLLDSFI-YNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTY 678
Query: 338 ICILSSYLMLGHLKE 352
++ ++ H KE
Sbjct: 679 SILMKHLVIEKHKKE 693
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/201 (19%), Positives = 85/201 (42%), Gaps = 2/201 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT L+ ++A ++ + + ++ + + +N ++ Y G +E V+ +
Sbjct: 327 TYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLM 386
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ K V P++ TYN I ++D+ L++M +S S D V Y L++
Sbjct: 387 ESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMV-ESKLSPDVVTYNTLIHGLCEVGV 445
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ +A + + QW T++ ++ +G + QI +SL+ K Y
Sbjct: 446 VDSASRLFRLMIRDGFSPDQW-TFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYT 504
Query: 339 CILSSYLMLGHLKEVGEIIDQ 359
++ Y G ++ + +
Sbjct: 505 ALIDGYCKAGKIEHAASLFKR 525
>gi|15235161|ref|NP_195672.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75266408|sp|Q9SV96.1|PP358_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g39620, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2453; Flags: Precursor
gi|5042178|emb|CAB44697.1| putative protein [Arabidopsis thaliana]
gi|7270946|emb|CAB80625.1| putative protein [Arabidopsis thaliana]
gi|58013022|gb|AAW62964.1| chloroplast embryo-defective 2453 [Arabidopsis thaliana]
gi|332661694|gb|AEE87094.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 563
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 131/314 (41%), Gaps = 23/314 (7%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGL--- 150
+ +EL KS ++ LE+ WM + ++ + Y+ I +M K F +
Sbjct: 103 LFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNS 162
Query: 151 ---PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQ-SNLSFNALMYNEMMTLYMSVG 206
P ++ + TA LH AK EK +++K N + YN ++ + G
Sbjct: 163 GCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSG 222
Query: 207 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 266
+V++V + +++ V PD++T+N + + I +++ L M + D + +
Sbjct: 223 KVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNE-CKPDIITF 281
Query: 267 VNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 326
L++ Y E T +S + T++ +II Y DK + ++K
Sbjct: 282 NVLIDSYGKKQEFEKME-QTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFK--- 337
Query: 327 MTKQKMTSRNYICILSSY----LMLGHLKEVGEIIDQWKQSATSD--FDISACNRLLGAF 380
KM NYI +Y +M G+ V + +++ SD S N +L +
Sbjct: 338 ----KMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVY 393
Query: 381 SDVGLTEKANE-FH 393
GL +A++ FH
Sbjct: 394 CRNGLYIEADKLFH 407
>gi|413916646|gb|AFW56578.1| hypothetical protein ZEAMMB73_703473, partial [Zea mays]
Length = 149
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%)
Query: 54 GKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEW 113
G D L R+ ++ PKRSA V+QRW EG +L +++ELRK R+KHALE+
Sbjct: 29 GGDTLGKRLLKLIYPKRSAVVVLQRWADEGRTVQKYQLNRVVRELRKYGRFKHALEVHHP 88
Query: 114 MVTH 117
+ H
Sbjct: 89 TLVH 92
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/316 (19%), Positives = 123/316 (38%), Gaps = 13/316 (4%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLS 153
+++ L K++R K A E+ M F Y T ID + K + + +
Sbjct: 231 MVRTLLKAKRVKEAREVFGQM-EKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAK 289
Query: 154 A--KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 211
A T TY L++ A E+AEELF + S N+++Y ++ + G++++
Sbjct: 290 ACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEA 349
Query: 212 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
+ +E+ PD+ T+ + I + N +Q K +EM G + V Y ++
Sbjct: 350 CSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMM-RGGCKPNVVTYTTIIQ 408
Query: 272 IYITASHLVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQIWKSLRM 327
+ NA K + +TY L+ + LG D+ Q+ L
Sbjct: 409 GLSKIGRVANA-----FRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDK 463
Query: 328 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 387
+ Y ++ G ++ + + + ++A + D C ++ G +
Sbjct: 464 CSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLD 523
Query: 388 KANEFHMLLLQKNCAP 403
+A ++ + C P
Sbjct: 524 EACRIFQRMVSEGCKP 539
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/242 (19%), Positives = 102/242 (42%), Gaps = 37/242 (15%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
+TA++ AK ++A E+F ++++ +A+ YN M+ G ++ V++ +
Sbjct: 228 HTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNML 287
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
K VP TY + ++S +++ ++ M+ SG + V Y +L++ + + +
Sbjct: 288 AKACVPTEVTYGILVNSLCKAGTLERAEELFRVMA-ASGFRPNSVIYTSLIHGFAKSGRM 346
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKD----------------------- 316
A S E ++ + IT+ +I GN +
Sbjct: 347 KEA-CSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTT 405
Query: 317 ------KIDQIWKSLRMTKQKMT------SRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
KI ++ + R+ K + S YIC+L + LG L E +++D+ + +
Sbjct: 406 IIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCS 465
Query: 365 TS 366
+S
Sbjct: 466 SS 467
>gi|297743996|emb|CBI36966.3| unnamed protein product [Vitis vinifera]
Length = 730
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 96/214 (44%), Gaps = 3/214 (1%)
Query: 179 LFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCA 238
LF + + + YN ++ GQ++ ++ E+ RK+++P++ TY+ I A
Sbjct: 199 LFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYA 258
Query: 239 ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQ 298
+D+ +EM S G D V Y L++IY A + E E S ++
Sbjct: 259 KAGRLDEALNLFNEMKFASIGLDR-VSYNTLLSIYAKLGRFEEA-LNVCKEMESSGIKKD 316
Query: 299 WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 358
+TY+ L+ Y G +++ ++++ ++ + Y ++ Y G +E E+
Sbjct: 317 AVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFR 376
Query: 359 QWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
++K++ D+ + L+ A GL E A F
Sbjct: 377 EFKKAGLKA-DVVLYSALIDALCKNGLVESAVSF 409
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 60/115 (52%), Gaps = 1/115 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY+ ++ YA A ++A LF +K +++ + + YN ++++Y +G+ E+ V +E+
Sbjct: 249 TYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEM 308
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
+ + D TYN + ++VK+ +EM + + + Y L+++Y
Sbjct: 309 ESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAER-IFPNLLTYSTLIDVY 362
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 64/137 (46%), Gaps = 1/137 (0%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
K + TY ALL Y E+ + +FE +K + N L Y+ ++ +Y G ++ V
Sbjct: 315 KDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEV 374
Query: 215 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274
E K+ + D+ Y+ I + ++ FLDEM+ G + V Y ++++ +
Sbjct: 375 FREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMT-KEGIRPNVVTYNSIIDAFG 433
Query: 275 TASHLVNAESSTLVEAE 291
+ + +A S + + E
Sbjct: 434 RSGIVEDATESEVGDKE 450
Score = 38.1 bits (87), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 162 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 221
LL Y W + A+ LF+ VKQ + S + YN + + GQ LVV E KR+
Sbjct: 537 GLLMGYGDNVWVQ-AQSLFDEVKQMDSSTASAFYNALTDMLWHFGQRRGAQLVVLEGKRR 595
Query: 222 NVVPDIFTYNLWISSC 237
+V N+W +SC
Sbjct: 596 HV-----WENMWSNSC 606
>gi|22330179|ref|NP_683419.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
gi|75216707|sp|Q9ZU27.1|PPR76_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g51965, mitochondrial; Flags: Precursor
gi|4220445|gb|AAD12672.1| Similar to gi|3004555 F19F24.14 salt inducible protein homolog from
Arabidopsis thaliana BAC gb|AC003673 [Arabidopsis
thaliana]
gi|332194619|gb|AEE32740.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
Length = 650
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 72 ATNVIQRWVSEG---NQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYA 128
A V R V G N+ T S L ++L + R +EIS+ +T Y+
Sbjct: 324 AIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQ-------GIYS 376
Query: 129 TRIDLMTKVFGIHSGERYFEGL---PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQ 185
+ ++K+ + R F + P+ + ++Y ++L GA T +A E+ ++ +
Sbjct: 377 YLVRTLSKLGHVSEAHRLFCDMWSFPVKGE-RDSYMSMLESLCGAGKTIEAIEMLSKIHE 435
Query: 186 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 245
+ + +MYN + + + Q+ + + E++K+ PDIFTYN+ I+S +D+
Sbjct: 436 KGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDE 495
Query: 246 VKKFLDEMSCDSGGSDDWVKYVNLVN 271
+E+ S D + Y +L+N
Sbjct: 496 AINIFEELE-RSDCKPDIISYNSLIN 520
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 65/147 (44%), Gaps = 2/147 (1%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y + K +LFE++K+ S + YN ++ + VG+V++ + EE++
Sbjct: 445 YNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELE 504
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
R + PDI +YN I+ ++D+ EM + G + D V Y L+ + +
Sbjct: 505 RSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQ-EKGLNPDVVTYSTLMECF-GKTER 562
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLI 306
V S E Q +TY+ L+
Sbjct: 563 VEMAYSLFEEMLVKGCQPNIVTYNILL 589
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 103/240 (42%), Gaps = 11/240 (4%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
S TY LL Y ++ KA +++ +++ + YN ++ ++ + EK V E
Sbjct: 203 SFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLD---ALAKDEKACQVFE 259
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
++K+++ D +TY + I + D+ +EM + G + + V Y L+ + +
Sbjct: 260 DMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITE-GLTLNVVGYNTLMQV-LAK 317
Query: 277 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 336
+V+ ++ + TY L+ L G ++D + + ++K+ MT
Sbjct: 318 GKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGV---VEISKRYMTQGI 374
Query: 337 YICILSSYLMLGHLKEVGEII-DQWKQSATSDFD--ISACNRLLGAFSDVGLTEKANEFH 393
Y ++ + LGH+ E + D W + D +S L GA + E ++ H
Sbjct: 375 YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIH 434
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 114/250 (45%), Gaps = 23/250 (9%)
Query: 148 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 207
EGL L+ Y L+ + A K +KA ++F R+ ++ N Y+ ++ L ++ GQ
Sbjct: 299 EGLTLNVVG---YNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQ 355
Query: 208 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK-FLDEMSCDSGGSDDWVKY 266
+ ++ VV EI ++ + I++Y + + + ++ + + F D S G D Y
Sbjct: 356 LVRLDGVV-EISKRYMTQGIYSY--LVRTLSKLGHVSEAHRLFCDMWSFPVKGERD--SY 410
Query: 267 VNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI-ILYAGLGNKDKIDQIWKSL 325
++++ A + A +E I ++ +T + +++ LG +I I
Sbjct: 411 MSMLESLCGAGKTIEA-----IEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLF 465
Query: 326 RMTKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQWKQSATSDF--DISACNRLLGAF 380
K+ S + Y +++S+ G + EV E I+ +++ SD DI + N L+
Sbjct: 466 EKMKKDGPSPDIFTYNILIASF---GRVGEVDEAINIFEELERSDCKPDIISYNSLINCL 522
Query: 381 SDVGLTEKAN 390
G ++A+
Sbjct: 523 GKNGDVDEAH 532
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 65/140 (46%), Gaps = 3/140 (2%)
Query: 117 HKEFVLSDSD-YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWT 173
H++ V++D+ Y T + K+ I FE + + + TY L+ +
Sbjct: 434 HEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEV 493
Query: 174 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 233
++A +FE +++S+ + + YN ++ G V++ + +E++ K + PD+ TY+
Sbjct: 494 DEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTL 553
Query: 234 ISSCAATLNIDQVKKFLDEM 253
+ T ++ +EM
Sbjct: 554 MECFGKTERVEMAYSLFEEM 573
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/338 (20%), Positives = 141/338 (41%), Gaps = 22/338 (6%)
Query: 76 IQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWM--------VTHKEFVLSDSDY 127
I R +S+ + + L ++ +KS R + A E+ M + +L D
Sbjct: 35 IHRALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLR 94
Query: 128 ATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN 187
A + L+ KV + G +S TY+ L+ Y + + A+++ +++
Sbjct: 95 ADAMALLWKV------REFMVGAGISPDVY-TYSTLIEAYCKVREFDTAKKVLVEMRERG 147
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 247
N + YN ++ G VE+ ++++ +VPD FTY I+ + ++ K
Sbjct: 148 CGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAK 207
Query: 248 KFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESS--TLVEAEKSITQRQWITYDFL 305
LDEMSC + + V Y NL++ ++ NA+ + + E + Q ITYD L
Sbjct: 208 ALLDEMSC-AELKPNVVVYANLIDGFMREG---NADEAFKMIKEMVAAGVQPNKITYDNL 263
Query: 306 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 365
+ +G D+ + K + + + Y I+ + + K+ ++ + + +
Sbjct: 264 VRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGI 323
Query: 366 SDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
S ++ + ++ G EKA++ + K P
Sbjct: 324 SP-NVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKP 360
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY+ ++H + EKA +L E + L NA +Y +++ Y G V + +++
Sbjct: 329 TYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKM 388
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ NV+PD++ YN I + +++ K+ +M + G + Y L++ Y+
Sbjct: 389 TKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQ-ERGLLPNEFTYSGLIHGYLKNGD 447
Query: 279 LVNAE 283
L +AE
Sbjct: 448 LESAE 452
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 53/131 (40%), Gaps = 35/131 (26%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVA------ 212
TY+ L+H Y E AE+L +R+ + L N ++Y +++ Y +EKV+
Sbjct: 434 TYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 493
Query: 213 -----------------------------LVVEEIKRKNVVPDIFTYNLWISSCAATLNI 243
V+ EI++ VPD+ Y+ IS T +
Sbjct: 494 LDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADR 553
Query: 244 DQVKKFLDEMS 254
++ LDEMS
Sbjct: 554 EKAFGILDEMS 564
>gi|15219049|ref|NP_175673.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207559|sp|Q9SSR6.1|PPR78_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g52640, mitochondrial; Flags: Precursor
gi|5903042|gb|AAD55601.1|AC008016_11 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|45773940|gb|AAS76774.1| At1g52640 [Arabidopsis thaliana]
gi|62320530|dbj|BAD95108.1| hypothetical protein [Arabidopsis thaliana]
gi|332194712|gb|AEE32833.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 114/290 (39%), Gaps = 17/290 (5%)
Query: 64 RISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEF--V 121
R +LP A R V G + V +L +L L + HA E+ K F V
Sbjct: 150 RANLPS-EACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHA---QEFFGKAKGFGIV 205
Query: 122 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEEL 179
S Y+ + ++ + F+ + + Y ALL + + ++
Sbjct: 206 PSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKM 265
Query: 180 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 239
F+ + L +A + + Y G V V++ +KR ++VP+++T+N I +
Sbjct: 266 FQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCK 325
Query: 240 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 299
+D LDEM D W N + Y VN + L +++
Sbjct: 326 NEKVDDAYLLLDEMIQKGANPDTWT--YNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDR 383
Query: 300 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGH 349
TY+ ++ L +G D+ +IW + M+ R + +++Y ++ H
Sbjct: 384 HTYNMVLKLLIRIGRFDRATEIW-------EGMSERKFYPTVATYTVMIH 426
>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic-like [Cucumis sativus]
Length = 799
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/340 (19%), Positives = 138/340 (40%), Gaps = 18/340 (5%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
A N ++ +S G ++ L K RY A ++ M++ + F SD +
Sbjct: 379 AENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLS-RNFRPSD------L 431
Query: 132 DLMTKVFGIHSGERYFEGLPL--------SAKTSETYTALLHLYAGAKWTEKAEELFERV 183
L V G+ ++ E L S + T AL+H GA +A + + +
Sbjct: 432 LLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEM 491
Query: 184 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 243
+ L + + YN ++ + + G+VE + EE+ ++ + PDI+TYN + +
Sbjct: 492 LERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKL 551
Query: 244 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 303
D K DE SG + Y ++ Y A+ + + E + E + I Y+
Sbjct: 552 DDAIKLWDEFK-ASGLISNIHTYGIMMEGYCKANRIEDVE-NLFNELLSKKMELNSIVYN 609
Query: 304 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 363
+I + GN Q+ ++++ Y ++ +G +++ +ID+ ++
Sbjct: 610 IIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKE 669
Query: 364 ATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
++ L+G + +G + A + ++ N P
Sbjct: 670 GFVP-NVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHP 708
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
YTAL+ Y + AE + + N+ N Y M+ Y +G +EK ++ ++K
Sbjct: 678 YTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMK 737
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
+VPD+ TYN+ + ++D K D+M+ + G D + Y LV+
Sbjct: 738 ESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATE-GLPVDEITYTTLVH 788
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY++L+H E A+ L + +++ N + Y ++ Y +GQ++ E+
Sbjct: 642 TYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEM 701
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
N+ P+ FTY + I N+++ L +M +SG D V Y L N + A+
Sbjct: 702 ISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMK-ESGIVPDVVTYNVLTNGFCKAND 760
Query: 279 LVNA 282
+ NA
Sbjct: 761 MDNA 764
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/224 (19%), Positives = 80/224 (35%), Gaps = 38/224 (16%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
TY ++ Y A E E LF + + N+++YN ++ + G V ++E
Sbjct: 571 HTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLEN 630
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
+K K ++P+ TY+ I ++ K +DEM + +V V
Sbjct: 631 MKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMR-----KEGFVPNV---------- 675
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
+ Y LI Y LG D + W + Y
Sbjct: 676 ----------------------VCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTY 713
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFS 381
++ Y LG++++ ++ + K+S D+ N L F
Sbjct: 714 TVMIDGYCKLGNMEKANNLLIKMKESGIVP-DVVTYNVLTNGFC 756
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 5/167 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
++T +++ E A ELF ++++ +S N + YN ++ G+++ + E++
Sbjct: 222 SFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKM 281
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K V P++ TY I+ D+V LDEM +G + + V + NL++ Y +
Sbjct: 282 TVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMI-GAGFNPNVVVFNNLIDGYCKMGN 340
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 325
+ A V K+IT Y L G D+I+ +L
Sbjct: 341 IEGALKIKDVMISKNITPTSVTLYS----LMQGFCKSDQIEHAENAL 383
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 82/197 (41%), Gaps = 18/197 (9%)
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
+ RK P + T N +SS ++ + MS G D + N++N
Sbjct: 177 LARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVMS--EGACPDVFSFTNVINALCKGG 234
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN- 336
+ NA ++ EK +TY+ +I GL ++D ++ K+KMT +
Sbjct: 235 KMENA-IELFMKMEKLGISPNVVTYNCII---NGLCQNGRLDNAFE----LKEKMTVKGV 286
Query: 337 ------YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 390
Y +++ + L +V I+D+ A + ++ N L+ + +G E A
Sbjct: 287 QPNLKTYGALINGLIKLNFFDKVNHILDEM-IGAGFNPNVVVFNNLIDGYCKMGNIEGAL 345
Query: 391 EFHMLLLQKNCAPTNAS 407
+ +++ KN PT+ +
Sbjct: 346 KIKDVMISKNITPTSVT 362
>gi|302141714|emb|CBI18917.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 96/214 (44%), Gaps = 9/214 (4%)
Query: 140 IHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE--KAEELFERVKQSNLSFNALMYNE 197
I ER F + ++ YT + + A + + +A ++F + NA+ +N
Sbjct: 231 ISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNN 290
Query: 198 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM--SC 255
+M +++ G+ EKV V ++KR PD TYN I S N+++ K L+ + C
Sbjct: 291 LMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVKKGC 350
Query: 256 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 315
+ S N + I+ VN+ + + + +TY+ L+ ++A +
Sbjct: 351 NLNASS-----FNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKST 405
Query: 316 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGH 349
D + ++ K + + + + Y ++S++ +GH
Sbjct: 406 DMVLKLRKEMDENEIEPNANTYRVLISTFCGIGH 439
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 53/336 (15%), Positives = 128/336 (38%), Gaps = 51/336 (15%)
Query: 80 VSEGNQATVSELRHILKE---LRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTK 136
+S + + + +R ++++ +R + L W +EF S Y IDL K
Sbjct: 99 ISSADSVSSAIVRRVIEKCGGVRHGIPFPQTLAFFNWATNLEEFGHSPEPYMEMIDLAGK 158
Query: 137 VF----GIHSGERYFEGLPLSAKTSE-TYTALLHLYAGAKWTEKAEELFERVKQSNLSFN 191
+H+ R + K + ++ ++ + + +A+ F+ +K +
Sbjct: 159 AGLAAEAVHAFNRMED---YGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKD-RFEPD 214
Query: 192 ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 251
++Y ++ + G + + V E+K + P+++TY++ I + + I +
Sbjct: 215 VVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFS 274
Query: 252 EMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAG 311
EM D G + + + NL+ +++ A
Sbjct: 275 EM-IDVGCDPNAITFNNLMRVHVKA----------------------------------- 298
Query: 312 LGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDIS 371
G +K+ Q++ ++ + Y ++ S+ +L+E +I++ K+ + + S
Sbjct: 299 -GRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVKKGC--NLNAS 355
Query: 372 ACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
+ N + G S +G A+ + C P +
Sbjct: 356 SFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVT 391
>gi|413952776|gb|AFW85425.1| chloroplast RNA splicing4 [Zea mays]
Length = 1435
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 124/284 (43%), Gaps = 7/284 (2%)
Query: 80 VSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFG 139
V +G +A+ E+ +++ + +S ++ AL+ EW+ + + A + ++ +
Sbjct: 147 VLDGARASPDEVAFVVRAVGESS-WRRALDAFEWLA--RSSAPASRAVAVVLGVLGRARQ 203
Query: 140 IHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMM 199
E F T + + A++ +YA + + A +L + + + + + +N ++
Sbjct: 204 DSIAEEVFLRFAGEGATVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLI 263
Query: 200 TLYMSVGQVEK-VAL-VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 257
G + VAL ++ E+++ + PD+ TYN IS+C+ + N++ ++M
Sbjct: 264 NARSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASE 323
Query: 258 GGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 317
D W Y +V+++ AE EK ITY+ L+ +A GN DK
Sbjct: 324 CRPDLWT-YNAMVSVHGRCGKAEEAERLFRELVEKGFMP-DAITYNSLLYAFAKEGNVDK 381
Query: 318 IDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 361
++ + L K Y ++ Y +G L + D+ +
Sbjct: 382 VEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMR 425
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 106/243 (43%), Gaps = 11/243 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +LL+ +A +K E E++ ++ N + YN M+ +Y +G+++ + +E+
Sbjct: 365 TYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEM 424
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ PD TY + I S I + K L++M+ D+G + + L+ Y
Sbjct: 425 RAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMT-DAGLKPTLIAFSALICAYAKGGR 483
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+AE +T S + + Y ++ ++A G+ +K+ +++ + + Y
Sbjct: 484 RADAE-NTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKMLCLYRKMMNDNYRPDDDMYQ 542
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
+L + +E+ E+I D ++ C LG S + + + LL+
Sbjct: 543 VLLVALAKEDKCEEIEEVI--------QDMEL-LCRMNLGIISTMLIKARCVSQGAKLLK 593
Query: 399 KNC 401
K C
Sbjct: 594 KAC 596
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 75/186 (40%), Gaps = 2/186 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY A++ ++ E+AE LF + + +A+ YN ++ + G V+KV E++
Sbjct: 330 TYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQL 389
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + TYN I +D DEM G + D V Y +++ +
Sbjct: 390 VKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRA-MGCTPDAVTYTVMIDSLGKMNR 448
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ A L + + + I + LI YA G + + + + + K Y+
Sbjct: 449 IAEA-GKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYL 507
Query: 339 CILSSY 344
+L +
Sbjct: 508 VMLDVF 513
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 117/292 (40%), Gaps = 46/292 (15%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSD-SDYATR 130
A V R+ EG ATV ++ +S R+ A ++ + M H + D + T
Sbjct: 207 AEEVFLRFAGEG--ATVQVFNAMMGVYARSGRFDDARQLLDTM--HDRGIDPDLVSFNTL 262
Query: 131 IDLMTKVFGIHSG---ERYFEGLPLSAKTSE-TYTALLHLYAGAKWTEKAEELFERVKQS 186
I+ +K + +G + FE + TY L+ + + E A +FE + S
Sbjct: 263 INARSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIAS 322
Query: 187 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 246
+ YN M++++ G+ E+ + E+ K +PD TYN + + A N+D+V
Sbjct: 323 ECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKV 382
Query: 247 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI 306
E +C+ LV K+ ++ ITY+ +I
Sbjct: 383 -----EHTCE---------------------QLV-----------KAGFKKNEITYNTMI 405
Query: 307 ILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 358
+Y +G D ++ +R + Y ++ S + + E G++++
Sbjct: 406 HMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLE 457
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/187 (19%), Positives = 86/187 (45%), Gaps = 2/187 (1%)
Query: 162 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 221
ALL++Y A ++ +++ + ++ L + YN ++ +Y + E+ ++ E+ ++
Sbjct: 925 ALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKR 984
Query: 222 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 281
+ P + +Y +++ A +Q + +EM S + + Y ++ IY A +
Sbjct: 985 GLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSI-YHMMMKIYRNAGNHSK 1043
Query: 282 AESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICIL 341
AE+ V E I + T L+ Y G + + + +L+ + ++++ Y +
Sbjct: 1044 AENLLAVMKEDGI-EPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVSTLPYSTVF 1102
Query: 342 SSYLMLG 348
+YL G
Sbjct: 1103 DAYLKNG 1109
Score = 41.2 bits (95), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 79/166 (47%), Gaps = 2/166 (1%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
+ AL+H YA + EKA +F+ + ++ N MM + G+++++ +VVEE++
Sbjct: 783 WNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQ 842
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
N T L + + A ++ +V K + M +G + Y +++++ +
Sbjct: 843 DMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKA-AGYLPNMHLYRSMISLLCHHNRF 901
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 325
+ E + E E + + + L+ +Y GN D+ Q+++S+
Sbjct: 902 RDVE-LMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSI 946
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 17/214 (7%)
Query: 128 ATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTA-LLHLYAGAKWTEKAEELFERVKQS 186
A +DL+ KV Y E L S ++ TA G EKA ++ + + +
Sbjct: 395 AELLDLVEKV--------YEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRK 446
Query: 187 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS-CAATLNIDQ 245
+ Y +++T +VEK L+ +E+KR V PD++TY + I S C A L I+Q
Sbjct: 447 GFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGL-IEQ 505
Query: 246 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES--STLVEAEKSITQRQWITYD 303
+ + DEM G S + V Y L++ Y+ + L+ A +V+A +TY
Sbjct: 506 ARSWFDEMR-SVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAA---CYPNAVTYS 561
Query: 304 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
LI G K ++++ L T + S Y
Sbjct: 562 ALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFY 595
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 103/250 (41%), Gaps = 32/250 (12%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYTALLH Y +K +A ++F R+ + NA+ Y+ ++ G+++K V E++
Sbjct: 524 TYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKL 583
Query: 219 --KRKNVVPDI-FTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275
NV D F N +C N+ +D + C + D
Sbjct: 584 IGTSGNVESDFYFEGN---DTCTIAPNVVTYGALIDGL-CKAQKVSD------------- 626
Query: 276 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM--T 333
A L++A + E + I YD LI + +G D +++ LRMTK +
Sbjct: 627 AHELLDAMLAAGCEPNQ-------IVYDALIDGFCKIGKIDNAQEVF--LRMTKCGYLPS 677
Query: 334 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 393
Y ++ G L +++ + + + ++ ++ S VG EKA
Sbjct: 678 VHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNP-NVVTYTAMIDGLSKVGEIEKALNLL 736
Query: 394 MLLLQKNCAP 403
L+ +K C+P
Sbjct: 737 SLMEEKGCSP 746
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYTA++ + EKA L +++ S N + Y ++ G+ + + +++
Sbjct: 715 TYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQM 774
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
K P+ TY + I+ C A +D+ LDEM
Sbjct: 775 NSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEM 809
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 64/158 (40%), Gaps = 3/158 (1%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVK 184
Y ID K+ I + + F + + TYT+L+ + A ++ +
Sbjct: 646 YDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEML 705
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
+ + N + Y M+ VG++EK ++ ++ K P++ TY I T D
Sbjct: 706 NDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKAD 765
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 282
K +M+ G + ++V Y L+N A L A
Sbjct: 766 ASLKLFKQMN-SKGCAPNYVTYRVLINHCCAAGLLDEA 802
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 107/247 (43%), Gaps = 3/247 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY AL++ + E AE L ++ + N +++N M+ Y G V+K + +
Sbjct: 275 TYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVM 334
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+R + D++TYN ++ KK L M+ ++G ++V Y L++I+
Sbjct: 335 ERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMT-ENGVESNYVSYTTLISIHSKEGD 393
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+V A + E ++ +TY+ +I Y G+ + ++ K + Y
Sbjct: 394 MVEAR-RLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYA 452
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
++ + + G + + ++ KQ ++ A L+ + G +E+A +F+ +L
Sbjct: 453 ALVHGHCVNGKVDVALRLFEEMKQRGAKP-NVVAYTALISGLAKEGRSEEAFQFYDNMLA 511
Query: 399 KNCAPTN 405
P +
Sbjct: 512 AGLTPDD 518
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 77/177 (43%), Gaps = 8/177 (4%)
Query: 151 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 210
PLSA + ++ + A + A L + + + + NA YN ++ Y +
Sbjct: 133 PLSA------SVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDAR 186
Query: 211 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 270
VA V++E++ V P + TY + + + +I +V+ DE+ + D + Y ++
Sbjct: 187 VAEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYF-YSAVI 245
Query: 271 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 327
N Y A ++ A S E + + TY LI + +G + + + +++
Sbjct: 246 NAYCRAGNVRRA-SEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQL 301
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 72/172 (41%), Gaps = 3/172 (1%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y LL Y K + E+ + ++ + Y ++ + G + KV V +EIK
Sbjct: 171 YNPLLDTYTRQKNDARVAEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIK 230
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
RKNV D++ Y+ I++ N+ + + DE +G + Y L+N + +
Sbjct: 231 RKNVAGDVYFYSAVINAYCRAGNVRRASEVFDE-CVGNGIEPNERTYGALINGFCKIGQI 289
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL-RMTKQ 330
AE L + + I ++ +I Y G DK +I + RM Q
Sbjct: 290 EAAE-MLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQ 340
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 98/211 (46%), Gaps = 2/211 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+ KA EL++ + + N + Y+ ++ + GQV+ ++E+
Sbjct: 441 TYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEM 500
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K +VP+I TYN I + N+ + ++FL +M D D + Y L++ Y+
Sbjct: 501 VNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKV-MPDLITYNTLIHGYVKEGK 559
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ A + L E Q +TY+ +I ++ GN + D ++K + + Y+
Sbjct: 560 MHEA-FNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYM 618
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFD 369
+++ +++ G+ K+ ++ D+ Q + D
Sbjct: 619 SMINGHVVAGNSKKSFQLHDEMLQKGLAPDD 649
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 104/247 (42%), Gaps = 3/247 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+T L+H Y EKA + F+ + L + + YN ++ G + K + +++
Sbjct: 406 TFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDM 465
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + P+ TY++ I S +D FLDEM + G + + Y +++ Y + +
Sbjct: 466 HSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEM-VNKGIVPNIMTYNSIIKGYCRSGN 524
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
V+ L + ITY+ LI Y G + + K + + + Y
Sbjct: 525 -VSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYN 583
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
I+S + + G+++E + + D ++ G ++K+ + H +LQ
Sbjct: 584 MIISGFSVHGNMQEADWVYKKMGARGIEP-DRYTYMSMINGHVVAGNSKKSFQLHDEMLQ 642
Query: 399 KNCAPTN 405
K AP +
Sbjct: 643 KGLAPDD 649
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 92/232 (39%), Gaps = 3/232 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY LL+ + AEEL +K+ + + + ++ Y G +EK + I
Sbjct: 371 TYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTI 430
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + PDI TYN I ++ + + D+M + V Y L++ +
Sbjct: 431 SDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSRE-IFPNHVTYSILIDSHCEKGQ 489
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ NA + K I +TY+ +I Y GN K Q +R K Y
Sbjct: 490 VDNAFAFLDEMVNKGIVP-NIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYN 548
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 390
++ Y+ G + E ++ + ++ D N ++ FS G ++A+
Sbjct: 549 TLIHGYVKEGKMHEAFNLL-KIMENENVQPDAVTYNMIISGFSVHGNMQEAD 599
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 55/325 (16%), Positives = 130/325 (40%), Gaps = 8/325 (2%)
Query: 71 SATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSD-SDYAT 129
+A +I VS+G + + +LK L ++ R+ A E+ M V D +
Sbjct: 212 AAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACG--VAPDVRSFNM 269
Query: 130 RIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSN 187
I + + R+++ + T + +++ L+ L+ + A E +++
Sbjct: 270 LIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFG 329
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 247
L + ++Y ++ + G + + V +E+ +PD+ TYN ++ + +
Sbjct: 330 LMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAE 389
Query: 248 KFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLII 307
+ L+EM + G D + L++ Y ++ A +++ + + +TY+ LI
Sbjct: 390 ELLNEMK-ERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRL-RPDIVTYNTLID 447
Query: 308 LYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSD 367
G+ K +++W + + Y ++ S+ G + +D+
Sbjct: 448 GMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVP 507
Query: 368 FDISACNRLLGAFSDVGLTEKANEF 392
+I N ++ + G K +F
Sbjct: 508 -NIMTYNSIIKGYCRSGNVSKGQQF 531
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 42/240 (17%), Positives = 92/240 (38%), Gaps = 15/240 (6%)
Query: 170 AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFT 229
A W + + V SN N N M+ Y Q +V V+ E++++ V PD+ T
Sbjct: 137 AGWPHLTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVT 196
Query: 230 YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI------TASHLVNAE 283
+N+ + + +++ +D M G V Y +++ + A + A
Sbjct: 197 HNVMVDARFRAGDVEAAMALIDSM-VSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAM 255
Query: 284 SSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSS 343
+ V + +++ LI + G ++ + +K +R + ++ C++
Sbjct: 256 DACGVAPDVR-------SFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGL 308
Query: 344 YLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
+ G + E + + ++ D ++G F GL +A ++ C P
Sbjct: 309 FTRRGEMDHAAEYLREMREFGLMP-DGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLP 367
>gi|334187332|ref|NP_001190970.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332661695|gb|AEE87095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 510
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 131/314 (41%), Gaps = 23/314 (7%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGL--- 150
+ +EL KS ++ LE+ WM + ++ + Y+ I +M K F +
Sbjct: 103 LFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNS 162
Query: 151 ---PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQ-SNLSFNALMYNEMMTLYMSVG 206
P ++ + TA LH AK EK +++K N + YN ++ + G
Sbjct: 163 GCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSG 222
Query: 207 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 266
+V++V + +++ V PD++T+N + + I +++ L M + D + +
Sbjct: 223 KVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNE-CKPDIITF 281
Query: 267 VNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 326
L++ Y E T +S + T++ +II Y DK + ++K
Sbjct: 282 NVLIDSYGKKQEFEKME-QTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFK--- 337
Query: 327 MTKQKMTSRNYICILSSY----LMLGHLKEVGEIIDQWKQSATSD--FDISACNRLLGAF 380
KM NYI +Y +M G+ V + +++ SD S N +L +
Sbjct: 338 ----KMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVY 393
Query: 381 SDVGLTEKANE-FH 393
GL +A++ FH
Sbjct: 394 CRNGLYIEADKLFH 407
>gi|218190151|gb|EEC72578.1| hypothetical protein OsI_06020 [Oryza sativa Indica Group]
Length = 738
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 103/236 (43%), Gaps = 6/236 (2%)
Query: 149 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 208
G+P +A Y A L A+ TEKA E+++R+K+ N + M+ +Y Q
Sbjct: 383 GIPPNATV---YNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQP 439
Query: 209 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268
V E+K P+I TY +++ A ++ ++ +EM +G D Y
Sbjct: 440 MSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQ-QAGHEPDVYAYNA 498
Query: 269 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 328
L+ Y A L S + + +Y+ L+ Y G + + +++ L+
Sbjct: 499 LMEAYSRAG-LPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQR 557
Query: 329 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 384
T ++++ +L+++ G+ E++ Q +S + D A N +L A++ G
Sbjct: 558 GMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTP-DTFALNAMLNAYARAG 612
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 96/231 (41%), Gaps = 10/231 (4%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
+ET+T ++++Y AK + ++F +K N Y ++ + G EK V E
Sbjct: 423 TETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFE 482
Query: 217 EIKRKNVVPDIFTYNLWI---SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
E+++ PD++ YN + S ++ + M C+ D Y LV+ Y
Sbjct: 483 EMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEP----DRASYNILVDAY 538
Query: 274 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
A +AE + E ++ ++ L+ +A GN + +++ L +
Sbjct: 539 GRAGLHEDAE-AVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTPD 597
Query: 334 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 384
+ +L++Y G L ++ ++ ++ D D+ N + A+ G
Sbjct: 598 TFALNAMLNAYARAGRLDDMERLLAAMERRG--DADVGTYNVAVNAYGRAG 646
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 46/249 (18%), Positives = 95/249 (38%), Gaps = 40/249 (16%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y L+ Y + KAE ++ + ++ Y ++ Y + G + + V+ E++
Sbjct: 321 YNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMR 380
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
+ P+ YN ++ ++ + M + ++ + ++N+Y A
Sbjct: 381 EHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTET-FTLMINVYGKAKQP 439
Query: 280 VNAESSTLVEAEKSITQRQWI-TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
++ S + KSI + I TY L+ +A G +K +++++ +
Sbjct: 440 MS--SMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEM------------- 484
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
Q A + D+ A N L+ A+S GL + A+E L+
Sbjct: 485 -----------------------QQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQH 521
Query: 399 KNCAPTNAS 407
C P AS
Sbjct: 522 MGCEPDRAS 530
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 88/198 (44%), Gaps = 4/198 (2%)
Query: 78 RWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKV 137
R V G TV+ ++ L R A E+ E M K Y I+ K
Sbjct: 611 RMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEM-GGKGLAPDVFTYNILINGHCKE 669
Query: 138 FGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 195
+ FE + T TYTAL++ + ++ ++LF+ + + + ++Y
Sbjct: 670 GNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLY 729
Query: 196 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 255
N ++ + + G +++ ++ E+++K + PD TYN + +D+ +K +DEM+
Sbjct: 730 NALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMT- 788
Query: 256 DSGGSDDWVKYVNLVNIY 273
+ G D V Y L++ Y
Sbjct: 789 ERGIQPDLVTYNTLISGY 806
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 144/364 (39%), Gaps = 28/364 (7%)
Query: 62 IFRISLPKRSAT-NVIQRWV-SEGNQATVSELRHILKELRKSQ---------------RY 104
+FR+ LP + T N++ R + S G A EL L+++ + R
Sbjct: 474 MFRLRLPLCTTTFNIMLRHLCSAGKPARALEL---LRQMPRPNAVTYNTVIAGFCSRGRV 530
Query: 105 KHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE---TYT 161
+ AL+I M + Y T I KV + + F+ + + Y
Sbjct: 531 QAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYN 590
Query: 162 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 221
AL+ Y + A +R+ + ++ YN ++ G+ + +VEE+ K
Sbjct: 591 ALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK 650
Query: 222 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 281
+ PD+FTYN+ I+ N+ + + + MS G V Y L IY +
Sbjct: 651 GLAPDVFTYNILINGHCKEGNVKKALEIFENMS-RRGVRATVVTYTAL--IYALSKKGQV 707
Query: 282 AESSTLV-EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICI 340
E+ L EA + + + Y+ LI ++ GN D+ +I + + Y +
Sbjct: 708 QETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTL 767
Query: 341 LSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKN 400
+ +LG + E ++ID+ + D+ N L+ +S G + A ++ K
Sbjct: 768 MRGLCLLGRVDEARKLIDEMTERGIQP-DLVTYNTLISGYSMKGDVKDALRIRNEMMNKG 826
Query: 401 CAPT 404
PT
Sbjct: 827 FNPT 830
>gi|413953500|gb|AFW86149.1| hypothetical protein ZEAMMB73_846563 [Zea mays]
Length = 1039
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 130/321 (40%), Gaps = 68/321 (21%)
Query: 93 HILKELRKSQRYKHALEISEWMVTH-------------------KEFVLSDSDYATRIDL 133
H+ E+ Y++A+ S +VTH E L + Y T I
Sbjct: 697 HLFMEMADQGSYRNAVTAS-ILVTHLTKHGKFQEVENIMHGCFRDEVQLDTALYNTFIKS 755
Query: 134 MTKVFGIHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFN 191
M + +HS ++ + S +++ +T+ ++ +Y +KA E+F ++ L +
Sbjct: 756 MLESGKLHSAVSIYDRMVSSGVSQSMQTFNTMISVYGKGGKLDKAVEMFAAAQELGLPID 815
Query: 192 ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 251
MY M++LY G+ ++ +L+ + +K + P ++N I++ A + + K
Sbjct: 816 EKMYTNMLSLYGKAGRHQEASLMFKRMKEDGIRPGKISFNSMINAYATSGLFSEAKSVFQ 875
Query: 252 EMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAG 311
EM D G + D Y+ L+ Y E+ EAE++I
Sbjct: 876 EMQ-DCGHAPDSFSYLALIRAY--------TEAKLYTEAEEAI----------------- 909
Query: 312 LGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE--VGE---IIDQWKQSATS 366
+++ ++ T C S+L+L LKE VGE I Q + +
Sbjct: 910 -----------RTMTLSSSNTTPS---CPHFSHLILAFLKEGRVGEARRIYGQMMEVGVA 955
Query: 367 DFDISACNRLLGAFSDVGLTE 387
D++ C ++ + D GL +
Sbjct: 956 P-DLACCRAMMRVYVDRGLVD 975
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 76/185 (41%), Gaps = 12/185 (6%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
YT LL LY + AEE F + Q +A+ ++ Y G+ E + L +
Sbjct: 175 AYTVLLRLYGRVGKVKLAEETFLEMLQVGCEPDAVACGTLLCAYARWGRHEDMMLFYSAV 234
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + +VP I YN ISS +V +M ++G + Y ++ +
Sbjct: 235 RGRGLVPPISVYNYMISSLQKQKLHGKVIHVWKQM-LEAGAPPNQFTYTVVIGSLVKEDL 293
Query: 279 LVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 334
L A V+ + +R+++ TY LI + G ++ ++++ M Q +
Sbjct: 294 LEEA-----VDLFGEMRRRRFVPEEATYSLLISASSRHGKGEQALRLFEE--MKGQGIAP 346
Query: 335 RNYIC 339
NY C
Sbjct: 347 SNYTC 351
Score = 38.1 bits (87), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 47/242 (19%), Positives = 97/242 (40%), Gaps = 2/242 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT ++ E+A +LF +++ Y+ +++ G+ E+ + EE+
Sbjct: 280 TYTVVIGSLVKEDLLEEAVDLFGEMRRRRFVPEEATYSLLISASSRHGKGEQALRLFEEM 339
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K + + P +T ++ + + +M S D V Y L+ IY
Sbjct: 340 KGQGIAPSNYTCASLLALHCKNEDYPKALALFSDME-SSKVIPDEVIYGILIRIYGKLG- 397
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L T E EK+ TY + ++ G+ D+ ++ +S++ K + +Y
Sbjct: 398 LYEEARQTFGEIEKAGLLNDEQTYVAMAQVHLNAGDCDRALEVLESMKTRGVKPSRFSYS 457
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
+L ++ + + QS D CN +L + +G +KA +LL+
Sbjct: 458 ALLRCHVAKEDVVAAEDTFRALSQSQHGLPDAFCCNDMLRLYMRLGRLDKARALVSVLLR 517
Query: 399 KN 400
++
Sbjct: 518 ED 519
Score = 38.1 bits (87), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 103/245 (42%), Gaps = 15/245 (6%)
Query: 152 LSAKTSETYTALLHL-YAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 210
L K ++ A L + Y AK E+A+ELF+ S AL+ N M+ + G+ E
Sbjct: 636 LGTKPDDSAVATLIVQYGQAKQLERAQELFDSASAS-FPDGALVCNAMVDAFCKCGRAED 694
Query: 211 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK-----FLDEMSCDSGGSDDWVK 265
+ E+ + + T ++ ++ +V+ F DE+ D+ + ++K
Sbjct: 695 AYHLFMEMADQGSYRNAVTASILVTHLTKHGKFQEVENIMHGCFRDEVQLDTALYNTFIK 754
Query: 266 YVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 325
+ + + L +A S ++Q T++ +I +Y G DK +++ +
Sbjct: 755 SM------LESGKLHSAVSIYDRMVSSGVSQSMQ-TFNTMISVYGKGGKLDKAVEMFAAA 807
Query: 326 RMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGL 385
+ + + Y +LS Y G +E + + K+ IS N ++ A++ GL
Sbjct: 808 QELGLPIDEKMYTNMLSLYGKAGRHQEASLMFKRMKEDGIRPGKISF-NSMINAYATSGL 866
Query: 386 TEKAN 390
+A
Sbjct: 867 FSEAK 871
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/207 (19%), Positives = 93/207 (44%), Gaps = 2/207 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y L+H + + ++A E++ R+ L + ++ +M ++ V ++EE+
Sbjct: 196 SYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEM 255
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + P+I+TY + I ID+ + + M D G D V Y L++ TA
Sbjct: 256 ESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMD-DDGCGPDVVTYTVLIDALCTARK 314
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L +A + + S + +TY L+ ++ G+ DK+++IW + +
Sbjct: 315 LDDA-MCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFT 373
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSAT 365
++++ G + E +++D ++
Sbjct: 374 ILVNALCKAGRINEAFDLLDTMRKQGV 400
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 79/177 (44%), Gaps = 14/177 (7%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
T+ TY L+ + + KA E FE++K ++ N + N + +G++ + +
Sbjct: 437 PTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAM 496
Query: 215 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS---CDSGGSDDWVKYVNLVN 271
E+K + PD TYN+ + + +D+ K L EMS C+ D + +L++
Sbjct: 497 FNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEP----DVIVINSLID 552
Query: 272 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID---QIWKSL 325
A V E+ +TY+ IL AGLG + +I Q+++S+
Sbjct: 553 TLYKAGR-VEEAWQMFCRMEEMNLAPTVVTYN---ILLAGLGKEGQIQKAVQLFESM 605
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 83/187 (44%), Gaps = 9/187 (4%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
A ++ VS T ++ L KS R A E+ + MV H + + Y +
Sbjct: 879 AMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMV-HYGCRPNSAIYNILV 937
Query: 132 DLMTKVFGIHSGERYF-----EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQS 186
+ K+ + + +F EG+ K+ YT L+ + A + A FE++KQ+
Sbjct: 938 NGYGKLGHVDTACEFFKRMVKEGIRPDLKS---YTILVDILCIAGRVDDALHYFEKLKQA 994
Query: 187 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 246
L + + YN M+ + E+ + E++ + +VPD++TYN I + I++
Sbjct: 995 GLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEA 1054
Query: 247 KKFLDEM 253
K +E+
Sbjct: 1055 GKIYEEL 1061
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 105/247 (42%), Gaps = 7/247 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT L+ A+ + A LF ++K S+ + + Y ++ + G ++KV + E+
Sbjct: 301 TYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEM 360
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ PD+ T+ + +++ I++ LD M G + Y L++ + A+
Sbjct: 361 EADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMR-KQGVLPNLHTYNTLISGLLRANR 419
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L +A E + TY LI + G+ K + ++ +M + +
Sbjct: 420 LDDA-LDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFE--KMKARGIAPNIVA 476
Query: 339 CILSSYLM--LGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 396
C S Y + +G L E + ++ K S + D N ++ +S VG ++A + +
Sbjct: 477 CNASLYSLAEMGRLGEAKAMFNELKSSGLAP-DSVTYNMMMKCYSKVGQVDEAIKLLSEM 535
Query: 397 LQKNCAP 403
+ C P
Sbjct: 536 SKVQCEP 542
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 104/256 (40%), Gaps = 21/256 (8%)
Query: 80 VSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFG 139
++ G + ++ L KS R A+++ +V+ +F + + ID + K
Sbjct: 852 LTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVS-GDFSPTPCTFGPLIDGLLKSGR 910
Query: 140 IHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 197
+ F+G+ S Y L++ Y + A E F+R+ + + + Y
Sbjct: 911 LDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTI 970
Query: 198 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 257
++ + G+V+ E++K+ + PD+ YNL I+ + ++ EM +
Sbjct: 971 LVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQ-NR 1029
Query: 258 GGSDDWVKYVNLV-NIYITASHLVNAESSTLVEAEKSITQRQWI-------TYDFLIILY 309
G D Y +L+ N+ I + EA K + Q+I TY+ LI Y
Sbjct: 1030 GIVPDLYTYNSLILNLGIVG---------MIEEAGKIYEELQFIGLKPNVFTYNALIRGY 1080
Query: 310 AGLGNKDKIDQIWKSL 325
GN + I+K +
Sbjct: 1081 TLSGNSELAYGIYKKM 1096
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 105/243 (43%), Gaps = 10/243 (4%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
T + Y L+ + E A LFE +K + + + YN ++ + G++ ++ +
Sbjct: 788 PTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDL 847
Query: 215 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK-FLDEMSCDSGGSDDWVKYVNLVNIY 273
+E+ + P+ TYN+ IS+ + +D+ + + +S D S + L++
Sbjct: 848 YDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDF--SPTPCTFGPLIDGL 905
Query: 274 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
+ + L +A I Y+ L+ Y LG+ D + +K RM K+ +
Sbjct: 906 LKSGRLDDAHEMFDGMVHYGCRPNSAI-YNILVNGYGKLGHVDTACEFFK--RMVKEGIR 962
Query: 334 S--RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA-N 390
++Y ++ + G + + ++ KQ+ D D+ A N ++ TE+A +
Sbjct: 963 PDLKSYTILVDILCIAGRVDDALHYFEKLKQAGL-DPDLVAYNLMINGLGRSQRTEEALS 1021
Query: 391 EFH 393
FH
Sbjct: 1022 LFH 1024
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 109/252 (43%), Gaps = 20/252 (7%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
Y A++ Y GA + A L V + + +A YN ++ G+ V++E+
Sbjct: 128 AYNAMVAGYCGAGQLDAARRL---VAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEM 184
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
R+ VPD+ TY + + + Q K LDEM D G + D V Y +VN
Sbjct: 185 LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR-DKGCTPDIVTYNVVVNGICQEGR 243
Query: 279 LVNAESSTLVEAEKSIT----QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 334
+ +A +E K++ + ++Y+ I+ GL ++ + + + QK
Sbjct: 244 VDDA-----IEFLKNLPSYGCEPNTVSYN---IVLKGLCTAERWEDAEELMGEMGQKGCP 295
Query: 335 RNYIC--ILSSYLMLGHLKEVG-EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 391
N + +L S+L L E E+++Q + + +S N LL AF +KA
Sbjct: 296 PNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSY-NPLLHAFCKQKKMDKAMA 354
Query: 392 FHMLLLQKNCAP 403
F L++ + C P
Sbjct: 355 FLDLMVSRGCYP 366
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y +L A+ E AEEL + Q N + +N +++ G VE V+E+I
Sbjct: 265 SYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQI 324
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 270
+ P+ +YN + + +D+ FLD M G D V Y L+
Sbjct: 325 PKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV-SRGCYPDIVSYNTLL 375
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 77/182 (42%), Gaps = 8/182 (4%)
Query: 143 GERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY 202
GE +G P T+ L+ E A E+ E++ + + N+L YN ++ +
Sbjct: 287 GEMGQKGCP---PNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAF 343
Query: 203 MSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 262
+++K ++ + + PDI +YN +++ + +D + L ++ D G +
Sbjct: 344 CKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLK-DKGCAPV 402
Query: 263 WVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 322
+ Y N V +T + L E Q ITY + AGL +D+I+
Sbjct: 403 LISY-NTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYS---TIAAGLCREDRIEDAI 458
Query: 323 KS 324
++
Sbjct: 459 RA 460
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 48/246 (19%), Positives = 93/246 (37%), Gaps = 3/246 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+ G T A + + + + + + Y ++ ++ +++E+
Sbjct: 160 TYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM 219
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ K PDI TYN+ ++ +D +FL + G + V Y ++ TA
Sbjct: 220 RDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLP-SYGCEPNTVSYNIVLKGLCTAER 278
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+AE + E + +T++ LI G + ++ + + S +Y
Sbjct: 279 WEDAE-ELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYN 337
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
+L ++ + + +D DI + N LL A G + A E L
Sbjct: 338 PLLHAFCKQKKMDKAMAFLDLMVSRGCYP-DIVSYNTLLTALCRSGEVDVAVELLHQLKD 396
Query: 399 KNCAPT 404
K CAP
Sbjct: 397 KGCAPV 402
>gi|414591141|tpg|DAA41712.1| TPA: hypothetical protein ZEAMMB73_063178 [Zea mays]
Length = 374
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 107/248 (43%), Gaps = 3/248 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L++ + E AE L ++ + N +++N M+ Y G V+ + +
Sbjct: 110 TYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAM 169
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
++ V DI+TYN +D+ K L M + G ++V Y L++I+
Sbjct: 170 EKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIM-IEMGVVPNYVTYTTLISIHCKDGD 228
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+V A AEK T +TY+ +I YA G+ + ++ K + Y
Sbjct: 229 MVEARRLFREMAEKGATP-SVVTYNVMIHGYAKKGSIREAERFRKEMEKKGFVPDVYTYA 287
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
++ + + G + ++ ++ KQ T + ++ A L+ + G +E A + + +L+
Sbjct: 288 SLVHGHCVNGKVDVALKLFEEMKQRGT-EPNVVAYTALISGLAKEGRSEAAFQLYDDMLK 346
Query: 399 KNCAPTNA 406
P ++
Sbjct: 347 AGLIPDDS 354
>gi|255549482|ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545122|gb|EEF46633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 924
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 83/187 (44%), Gaps = 2/187 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT ++H YA T KA E F +++ L + Y ++ G+++ V +E+
Sbjct: 658 TYTTIMHGYAALGDTGKAFEYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEM 717
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+N+ + F YN+ I A ++ + + +M G D Y + +N A
Sbjct: 718 SAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMK-QGGVKPDIHTYTSFINACCKAGD 776
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
++ A S + E E S + TY LI +A +K + ++ +++ K Y
Sbjct: 777 MLRA-SKMMEEMETSGVKPNVKTYTTLIHGWARASLPEKALRCFQEMKLAGLKPDKAVYH 835
Query: 339 CILSSYL 345
C++++ L
Sbjct: 836 CLMTALL 842
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 89/205 (43%), Gaps = 2/205 (0%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y +++ Y ++AE L ++ + +Y+ MM Y VG EK V E +K
Sbjct: 414 YGNMIYAYCQTCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLK 473
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
P + +Y I+ A I + + + +M +G + Y L+N ++
Sbjct: 474 ECGFAPSVVSYGCLINLYAKVGKISKALE-VSKMMESAGIKHNMKTYSMLINGFLKLKDW 532
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 339
NA + + K + + Y+ +I + G+G D+ + K ++ + + TSR ++
Sbjct: 533 ANA-FAIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMP 591
Query: 340 ILSSYLMLGHLKEVGEIIDQWKQSA 364
I+ + G +K ++ D ++S
Sbjct: 592 IIHGFARAGEMKRALDVFDMMRRSG 616
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 116/279 (41%), Gaps = 18/279 (6%)
Query: 116 THKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWT 173
+ +E+ L S YA R D+ H + FE + TS YT+L+H YA +
Sbjct: 305 SRREYGLMVSYYARRGDM-------HRARQTFESMRARGIEPTSHVYTSLIHAYAVGRDM 357
Query: 174 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 233
E+A ++K+ + + + Y+ ++ + +G + +E K ++ + Y
Sbjct: 358 EEALSCARKMKEEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKDRHSHMNAIIYGNM 417
Query: 234 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK- 292
I + T N+DQ + + EM + G D +++ + + +V E L E+
Sbjct: 418 IYAYCQTCNMDQAEALVREMEGE--GID---APIDIYHTMMDGYTMVGNEEKCLTVFERL 472
Query: 293 --SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 350
++Y LI LYA +G K ++ K + K + Y +++ +L L
Sbjct: 473 KECGFAPSVVSYGCLINLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDW 532
Query: 351 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
I + + D+ N ++ AF +G ++A
Sbjct: 533 ANAFAIFEDVVKDGLKP-DVVLYNNIIRAFCGMGTMDRA 570
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 42/234 (17%), Positives = 105/234 (44%), Gaps = 3/234 (1%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
TS T+ ++H +A A ++A ++F+ +++S +N ++ + Q+EK ++
Sbjct: 585 TSRTFMPIIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEIL 644
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275
+E+ V P+ TY + AA + + ++ ++ D G D Y L+
Sbjct: 645 DEMALAGVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLR-DEGLQLDVYTYEALLKACCK 703
Query: 276 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
+ + +A + T + ++I + ++ Y+ LI +A G+ + + + ++ K
Sbjct: 704 SGRMQSALAVTKEMSAQNIPRNTFV-YNILIDGWARRGDVWEAADLMQQMKQGGVKPDIH 762
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
Y +++ G + +++++ + S ++ L+ ++ L EKA
Sbjct: 763 TYTSFINACCKAGDMLRASKMMEEMETSGVKP-NVKTYTTLIHGWARASLPEKA 815
>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 95/213 (44%), Gaps = 14/213 (6%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY+ ++ A+ TE+ +E F+ + N+ N ++YN ++ Y G++ + E++
Sbjct: 612 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM 671
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K K + P+ TY I + +++ K +EM + G + Y L++ Y
Sbjct: 672 KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALIDGYGKLGQ 730
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR---MTKQKMTSR 335
+V E L E ITY +I YA GN + ++ +R + +T +
Sbjct: 731 MVKVE-CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYK 789
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDF 368
+I G+LK+ G +++ +K S ++
Sbjct: 790 EFI--------YGYLKQ-GGVLEAFKGSDEENY 813
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 1/129 (0%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
+ S TYT+L+ + E+A+ LFE ++ L N Y ++ Y +GQ+ KV
Sbjct: 677 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVEC 736
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
++ E+ KNV P+ TY + I A N+ + + L+EM + G D + Y + Y
Sbjct: 737 LLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMR-EKGIVPDSITYKEFIYGY 795
Query: 274 ITASHLVNA 282
+ ++ A
Sbjct: 796 LKQGGVLEA 804
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 95/202 (47%), Gaps = 6/202 (2%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
+T ++ + E+A +LF +++++ ++ N + +N ++ G+ ++ + E++
Sbjct: 263 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV 322
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
+ + P + TY++ + I L EM+ G + + Y NL++ +I A L
Sbjct: 323 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMT-KKGFPPNVIVYNNLIDSFIEAGSL 381
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK---SLRMTKQKMTSRN 336
A + K ++ TY+ LI Y G D +++ K S+ + + +
Sbjct: 382 NKAIEIKDLMVSKGLSLTSS-TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 440
Query: 337 YICILSSYLML-GHLKEVGEII 357
IC+L S+LM L+ VGE++
Sbjct: 441 VICLLCSHLMFDSALRFVGEML 462
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 86/195 (44%), Gaps = 2/195 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y L+ G K ++A + + + L + Y+ ++ ++ +VE+ ++
Sbjct: 542 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC 601
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
KR ++PD++TY++ I C ++ ++F DEM + V Y +L+ Y +
Sbjct: 602 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM-SKNVQPNTVVYNHLIRAYCRSGR 660
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L A K I+ TY LI + + ++ +++ +RM + +Y
Sbjct: 661 LSMALELREDMKHKGISPNSA-TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYT 719
Query: 339 CILSSYLMLGHLKEV 353
++ Y LG + +V
Sbjct: 720 ALIDGYGKLGQMVKV 734
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 88/198 (44%), Gaps = 4/198 (2%)
Query: 78 RWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKV 137
R V G TV+ ++ L R A E+ E M K Y I+ K
Sbjct: 616 RMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEM-GGKGLAPDVFTYNILINGHCKE 674
Query: 138 FGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 195
+ FE + T TYTAL++ + ++ ++LF+ + + + ++Y
Sbjct: 675 GNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLY 734
Query: 196 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 255
N ++ + + G +++ ++ E+++K + PD TYN + +D+ +K +DEM+
Sbjct: 735 NALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMT- 793
Query: 256 DSGGSDDWVKYVNLVNIY 273
+ G D V Y L++ Y
Sbjct: 794 ERGIQPDLVTYNTLISGY 811
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 144/364 (39%), Gaps = 28/364 (7%)
Query: 62 IFRISLPKRSAT-NVIQRWV-SEGNQATVSELRHILKELRKSQ---------------RY 104
+FR+ LP + T N++ R + S G A EL L+++ + R
Sbjct: 479 MFRLRLPLCTTTFNIMLRHLCSAGKPARALEL---LRQMPRPNAVTYNTVIAGFCSRGRV 535
Query: 105 KHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE---TYT 161
+ AL+I M + Y T I KV + + F+ + + Y
Sbjct: 536 QAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYN 595
Query: 162 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 221
AL+ Y + A +R+ + ++ YN ++ G+ + +VEE+ K
Sbjct: 596 ALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK 655
Query: 222 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 281
+ PD+FTYN+ I+ N+ + + + MS G V Y L IY +
Sbjct: 656 GLAPDVFTYNILINGHCKEGNVKKALEIFENMS-RRGVRATVVTYTAL--IYALSKKGQV 712
Query: 282 AESSTLV-EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICI 340
E+ L EA + + + Y+ LI ++ GN D+ +I + + Y +
Sbjct: 713 QETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTL 772
Query: 341 LSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKN 400
+ +LG + E ++ID+ + D+ N L+ +S G + A ++ K
Sbjct: 773 MRGLCLLGRVDEARKLIDEMTERGIQP-DLVTYNTLISGYSMKGDVKDALRIRNEMMNKG 831
Query: 401 CAPT 404
PT
Sbjct: 832 FNPT 835
>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19440, chloroplastic; Flags: Precursor
Length = 838
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 95/213 (44%), Gaps = 14/213 (6%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY+ ++ A+ TE+ +E F+ + N+ N ++YN ++ Y G++ + E++
Sbjct: 625 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM 684
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K K + P+ TY I + +++ K +EM + G + Y L++ Y
Sbjct: 685 KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALIDGYGKLGQ 743
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR---MTKQKMTSR 335
+V E L E ITY +I YA GN + ++ +R + +T +
Sbjct: 744 MVKVE-CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYK 802
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDF 368
+I G+LK+ G +++ +K S ++
Sbjct: 803 EFI--------YGYLKQ-GGVLEAFKGSDEENY 826
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 1/129 (0%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
+ S TYT+L+ + E+A+ LFE ++ L N Y ++ Y +GQ+ KV
Sbjct: 690 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVEC 749
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
++ E+ KNV P+ TY + I A N+ + + L+EM + G D + Y + Y
Sbjct: 750 LLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMR-EKGIVPDSITYKEFIYGY 808
Query: 274 ITASHLVNA 282
+ ++ A
Sbjct: 809 LKQGGVLEA 817
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 95/202 (47%), Gaps = 6/202 (2%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
+T ++ + E+A +LF +++++ ++ N + +N ++ G+ ++ + E++
Sbjct: 276 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV 335
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
+ + P + TY++ + I L EM+ G + + Y NL++ +I A L
Sbjct: 336 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMT-KKGFPPNVIVYNNLIDSFIEAGSL 394
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK---SLRMTKQKMTSRN 336
A + K ++ TY+ LI Y G D +++ K S+ + + +
Sbjct: 395 NKAIEIKDLMVSKGLSLTSS-TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 453
Query: 337 YICILSSYLML-GHLKEVGEII 357
IC+L S+LM L+ VGE++
Sbjct: 454 VICLLCSHLMFDSALRFVGEML 475
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 86/195 (44%), Gaps = 2/195 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y L+ G K ++A + + + L + Y+ ++ ++ +VE+ ++
Sbjct: 555 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC 614
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
KR ++PD++TY++ I C ++ ++F DEM + V Y +L+ Y +
Sbjct: 615 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM-SKNVQPNTVVYNHLIRAYCRSGR 673
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L A K I+ TY LI + + ++ +++ +RM + +Y
Sbjct: 674 LSMALELREDMKHKGISPNSA-TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYT 732
Query: 339 CILSSYLMLGHLKEV 353
++ Y LG + +V
Sbjct: 733 ALIDGYGKLGQMVKV 747
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 83/171 (48%), Gaps = 2/171 (1%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
T ETYT+L+ ++ +AEE F++ + + + +M+N ++ + G +++ ++
Sbjct: 426 TVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLL 485
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275
+E+ VVPD T+N + +++ KK LDEM + G D + Y L++ Y
Sbjct: 486 KEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMK-ERGIKPDHISYNTLISGYSK 544
Query: 276 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 326
+ +A E +TY+ LI Y+ +G D +++ + ++
Sbjct: 545 RGDMKDA-LEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQ 594
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 7/181 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +++ Y E A ++F+ +K NL + YN ++ ++E+ + V+ ++
Sbjct: 254 TYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKL 313
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+VP+ TYN I C ++D+ + DEM + G Y L++
Sbjct: 314 LESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMM-NRGIVASVFTYNLLIHALFLEKR 372
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKI-----DQIWKSLRMTKQKMT 333
+ AE EK + + +TY+ I Y GN K + + K++R T + T
Sbjct: 373 IEEAEDMIKEMREKGV-EPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYT 431
Query: 334 S 334
S
Sbjct: 432 S 432
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 170 AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFT 229
KW +KA++ ++ + N + YN ++ Y G+ E + + + +K KN+ PD +T
Sbjct: 231 GKW-KKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYT 289
Query: 230 YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
YN +IS I++ L ++ +SG + V Y L++
Sbjct: 290 YNSFISRLCKERRIEEASGVLCKL-LESGLVPNAVTYNALID 330
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 46/246 (18%), Positives = 92/246 (37%), Gaps = 37/246 (15%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+H K E+AE++ + +++ + + + YN + Y G +K + +E+
Sbjct: 359 TYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEM 418
Query: 219 KRKNV-----------------------------------VPDIFTYNLWISSCAATLNI 243
KN+ +PDI +N I NI
Sbjct: 419 VEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNI 478
Query: 244 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 303
D+ + L EM ++ D V + L+ Y + A+ L E ++ + I+Y+
Sbjct: 479 DRAFQLLKEMD-NAKVVPDEVTFNTLMQGYCRERKVEEAK-KLLDEMKERGIKPDHISYN 536
Query: 304 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 363
LI Y+ G+ +++ + T Y ++ Y +G E++ + +
Sbjct: 537 TLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSK 596
Query: 364 ATSDFD 369
+ D
Sbjct: 597 GITPDD 602
>gi|162460542|ref|NP_001105869.1| pentatricopeptide repeat protein [Zea mays]
gi|95931777|gb|ABF57644.1| pentatricopeptide repeat protein [Zea mays]
Length = 886
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 92/207 (44%), Gaps = 2/207 (0%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y+ ++H + + ++AEEL +++ + +Y+ MM Y V +K +V E +K
Sbjct: 359 YSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLK 418
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
P I +Y I+ + + EM G + Y L+N +I
Sbjct: 419 ECGFKPTIISYGCLINLYVKVGKVPKAIAISKEME-SHGIKHNNKTYSMLINGFIHLHDF 477
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 339
NA S + KS Q Y+ L+ + +GN D+ +I++ ++ + + ++R +
Sbjct: 478 ANA-FSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRP 536
Query: 340 ILSSYLMLGHLKEVGEIIDQWKQSATS 366
I+ + + G +K + +D ++S +
Sbjct: 537 IIEGFAVAGDMKRAFDTLDLMRRSGCA 563
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 84/192 (43%), Gaps = 2/192 (1%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
A TYT ++ YA + KA E F ++K+S L + +Y ++ G+++
Sbjct: 598 APNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALA 657
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
V E+ + + + F YN+ I A ++ + L +M D G + + + +N
Sbjct: 658 VTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLLKQMKED-GIPPNIHTFTSYINAC 716
Query: 274 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
A + AE+ A+ + + T+ LI +A + D+ + ++ ++ K
Sbjct: 717 CKAGDMQRAENVIQEMADVGL-KPNVKTFTTLIKGWARVSLPDRALKCFEEMKSAGLKPD 775
Query: 334 SRNYICILSSYL 345
Y C+++S L
Sbjct: 776 EAAYHCLVTSLL 787
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 113/292 (38%), Gaps = 36/292 (12%)
Query: 147 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 206
FE +P ++ + ++ YA A FE ++ + NA ++ ++ Y G
Sbjct: 243 FERIPKPSR--REFGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAG 300
Query: 207 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN-------IDQVKKFLDEMS----- 254
+ VEE+K + + + TY++ IS T + + K LD ++
Sbjct: 301 DMRGALSCVEEMKSEGIEMTVVTYSILISGYGKTNDAQSADNLFKEAKTKLDNLNGIIYS 360
Query: 255 ------CDSGGSDDWVKYVN---------LVNIYITASH---LVNAESSTLVEAEK---S 293
C SG D + V +++Y + H +V E L+ E+
Sbjct: 361 NIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKEC 420
Query: 294 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 353
+ I+Y LI LY +G K I K + K ++ Y +++ ++ L
Sbjct: 421 GFKPTIISYGCLINLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANA 480
Query: 354 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 405
I + +S D + N L+ AF +G ++A + ++ P+N
Sbjct: 481 FSIFEDMIKSGLQP-DRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSN 531
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 43/101 (42%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
A T TY AL+H EKA + +++ + ++ N Y +M Y + G + K
Sbjct: 563 APTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFE 622
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 254
+IK + D++ Y + +C + + EMS
Sbjct: 623 YFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMS 663
>gi|27545040|gb|AAO18446.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
gi|108711829|gb|ABF99624.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 863
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 115/300 (38%), Gaps = 46/300 (15%)
Query: 147 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMM------- 199
F LP ++T+ +YT+L+ YA E+A EL +++K S ++ A YN ++
Sbjct: 159 FHDLPSESRTALSYTSLIAAYARNALHEEARELLDQMKASGVAPTAATYNTVLAACARAT 218
Query: 200 ----TLYMSVG-------------------------------QVEKVALVVEEIKRKNVV 224
M +G ++ +++ + V+
Sbjct: 219 DPPVPFDMLLGLFAEMRHDPSPSVRPDLTTYNTLLAAAAVRALSDQSEMLLRTMLEAGVL 278
Query: 225 PDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES 284
PD +Y + + A N+ +V + EMS +G + D Y+ L+ + A
Sbjct: 279 PDTASYRHIVDAFAGAGNLSRVAELFAEMSA-TGHTPDPSAYLGLMEAHTLVGATAEA-V 336
Query: 285 STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY 344
+ L + + TY L+ LY G D + ++++ +R T T+ Y + +
Sbjct: 337 AVLRQMQADGCPPTAATYRVLLDLYGRQGRFDGVRELFREMRTTVPPDTA-TYNVLFRVF 395
Query: 345 LMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 404
G KEV E+ S DI C ++ A GL E A E + + PT
Sbjct: 396 GDGGFFKEVVELFQDMLHSEVEP-DIDTCENVMVACGRGGLHEDAREVLDYITTEGMVPT 454
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 109/248 (43%), Gaps = 9/248 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT L+ A +KA+EL+ +++ S+ S + + Y +M + VG +E V E+
Sbjct: 307 TYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEM 366
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ PD+ TY + I + + ++D+ LD M+ G + Y ++ + A
Sbjct: 367 EVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMT-TKGIFPNLHTYNTMICGLLKARR 425
Query: 279 LVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
L E+ L+E +S+ + +Y I Y G+ K +++ M K+ +
Sbjct: 426 L--DEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFET--MKKRGIMPSIA 481
Query: 338 ICILSSYLM--LGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 395
C S Y + G + E +I + + S D N L+ +S G +KA +
Sbjct: 482 ACNASLYTLAETGRISEAEDIFNDLHKCGLSP-DSVTYNMLMKCYSKAGQIDKATQLLSE 540
Query: 396 LLQKNCAP 403
++ K C P
Sbjct: 541 MISKGCEP 548
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 13/120 (10%)
Query: 126 DYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQ 185
D D TK GIH T E+Y L+ G+ +TEKA ELFE +K
Sbjct: 778 DAQNVFDKFTKNLGIHP-------------TLESYNCLMDGLLGSNFTEKALELFEDMKS 824
Query: 186 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 245
+ N YN ++ + ++ K+ + E++ + P+ T+N+ IS+ + N+++
Sbjct: 825 AGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNK 884
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 99/234 (42%), Gaps = 5/234 (2%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLP-- 151
I+ L KS AL++ + + +F + Y ID + K + FE +
Sbjct: 872 IISALVKSNNLNKALDLY-YELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDY 930
Query: 152 LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 211
S Y L++ + + + A ELF+++ + + + Y ++ G++++
Sbjct: 931 GCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEA 990
Query: 212 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
EE+K + PD +YN I+ + +D+ EM + G S D Y L+
Sbjct: 991 VQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMK-NRGISPDLYTYNALI- 1048
Query: 272 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 325
+++ + V+ E + + TY+ LI ++ GNKD+ ++K +
Sbjct: 1049 LHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKM 1102
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 6/192 (3%)
Query: 100 KSQRYKHALEISEWMVTHKEFVLSD-SDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE 158
KS A E+ + MV KE + D Y ++ + I +YFE L L+ +
Sbjct: 948 KSGEIDFACELFKKMV--KEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPD 1005
Query: 159 T--YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
T Y +++ ++ ++A LF +K +S + YN ++ G+V+ + E
Sbjct: 1006 TVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYE 1065
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
E++ + P +FTYN I + + N DQ +M G S + + L N Y A
Sbjct: 1066 ELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMV-VGCSPNTETFAQLPNKYPRA 1124
Query: 277 SHLVNAESSTLV 288
+ N + +
Sbjct: 1125 GLVHNPFGAVFI 1136
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/196 (18%), Positives = 91/196 (46%), Gaps = 2/196 (1%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
+ T TY L+ A +E+A ++FE + N+++YN ++ + G+++
Sbjct: 898 SPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACE 957
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
+ +++ ++ + PD+ +Y + + T ID+ ++ +E+ +G D V Y ++N
Sbjct: 958 LFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKL-TGLDPDTVSYNFIIN-G 1015
Query: 274 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
+ S ++ S E + TY+ LI+ G D ++++ L++ + +
Sbjct: 1016 LGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPS 1075
Query: 334 SRNYICILSSYLMLGH 349
Y ++ + + G+
Sbjct: 1076 VFTYNALIRGHSLSGN 1091
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%)
Query: 162 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 221
A L+ A +AE++F + + LS +++ YN +M Y GQ++K ++ E+ K
Sbjct: 485 ASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISK 544
Query: 222 NVVPDIFTYNLWISS 236
PD+ N I++
Sbjct: 545 GCEPDVMIINSLINT 559
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 100/242 (41%), Gaps = 13/242 (5%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT + A+ + A +F+ + + + Y ++ + G+++K + ++
Sbjct: 272 TYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKM 331
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + PD TY + +++ VK+F +EM D G + D V Y L+ +
Sbjct: 332 RASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVD-GYAPDVVTYTILIEALCKSGD 390
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID---QIWKSLRMTKQKMTSR 335
+ A V K I TY+ +I GL ++D ++ +++ K T+
Sbjct: 391 VDRAFDMLDVMTTKGIFPNLH-TYNTMI---CGLLKARRLDEALELLENMESLGVKPTAF 446
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA----NE 391
+Y+ + Y G + + + K+ I+ACN L ++ G +A N+
Sbjct: 447 SYVLFIDYYGKSGDPAKAIDTFETMKKRGIMP-SIAACNASLYTLAETGRISEAEDIFND 505
Query: 392 FH 393
H
Sbjct: 506 LH 507
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 2/158 (1%)
Query: 115 VTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTS-ETYTALLHLYAGAKWT 173
+T F+L+ Y I L+ F + + Y + K S +TY+AL+ T
Sbjct: 192 MTEVGFILNAYSYNGLIHLLLPGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDT 251
Query: 174 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 233
K L E +K L N Y + +++ + +E+ + PD+ TY +
Sbjct: 252 RKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVL 311
Query: 234 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
I + A +D+ K+ +M S S D V Y+ L++
Sbjct: 312 IDALCAAGKLDKAKELYVKMRASS-HSPDRVTYITLMD 348
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 69/165 (41%), Gaps = 7/165 (4%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
T+ +Y + Y + KA + FE +K+ + + N + G++ + +
Sbjct: 443 PTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDI 502
Query: 215 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN-LVNIY 273
++ + + PD TYN+ + + ID+ + L EM S G + V +N L+N
Sbjct: 503 FNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMI--SKGCEPDVMIINSLINTL 560
Query: 274 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKI 318
A V+A + +TY+ IL GLG + KI
Sbjct: 561 YKAGR-VDAAWKMFGRLKNLKLAPTVVTYN---ILLTGLGKEGKI 601
>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
Length = 814
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 95/213 (44%), Gaps = 14/213 (6%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY+ ++ A+ TE+ +E F+ + N+ N ++YN ++ Y G++ + E++
Sbjct: 601 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM 660
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K K + P+ TY I + +++ K +EM + G + Y L++ Y
Sbjct: 661 KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALIDGYGKLGQ 719
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR---MTKQKMTSR 335
+V E L E ITY +I YA GN + ++ +R + +T +
Sbjct: 720 MVKVE-CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYK 778
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDF 368
+I G+LK+ G +++ +K S ++
Sbjct: 779 EFI--------YGYLKQ-GGVLEAFKGSDEENY 802
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 1/129 (0%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
+ S TYT+L+ + E+A+ LFE ++ L N Y ++ Y +GQ+ KV
Sbjct: 666 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVEC 725
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
++ E+ KNV P+ TY + I A N+ + + L+EM + G D + Y + Y
Sbjct: 726 LLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMR-EKGIVPDSITYKEFIYGY 784
Query: 274 ITASHLVNA 282
+ ++ A
Sbjct: 785 LKQGGVLEA 793
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 96/204 (47%), Gaps = 10/204 (4%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
+T ++ + E+A +LF +++++ ++ N + +N ++ G+ ++ + E++
Sbjct: 252 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV 311
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
+ + P + TY++ + I L EM+ G + + Y NL++ +I A L
Sbjct: 312 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMT-KKGFPPNVIVYNNLIDSFIEAGSL 370
Query: 280 VNA--ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK---SLRMTKQKMTS 334
A +V S+T TY+ LI Y G D +++ K S+ + +
Sbjct: 371 NKAIEIKDLMVSKGLSLTSS---TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 427
Query: 335 RNYICILSSYLML-GHLKEVGEII 357
+ IC+L S+LM L+ VGE++
Sbjct: 428 TSVICLLCSHLMFDSALRFVGEML 451
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 86/195 (44%), Gaps = 2/195 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y L+ G K ++A + + + L + Y+ ++ ++ +VE+ ++
Sbjct: 531 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC 590
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
KR ++PD++TY++ I C ++ ++F DEM + V Y +L+ Y +
Sbjct: 591 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM-SKNVQPNTVVYNHLIRAYCRSGR 649
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L A K I+ TY LI + + ++ +++ +RM + +Y
Sbjct: 650 LSMALELREDMKHKGISPNSA-TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYT 708
Query: 339 CILSSYLMLGHLKEV 353
++ Y LG + +V
Sbjct: 709 ALIDGYGKLGQMVKV 723
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 88/198 (44%), Gaps = 4/198 (2%)
Query: 78 RWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKV 137
R V G TV+ ++ L R A E+ E M K L Y I+ K
Sbjct: 282 RMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEM-GGKGLALDVFTYNILINGHCKE 340
Query: 138 FGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 195
+ FE + T TYT+L++ + ++ ++LF+ + + + ++Y
Sbjct: 341 GNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLY 400
Query: 196 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 255
N ++ + + G +++ ++ E+++K + PD TYN + +D+ +K +DEM+
Sbjct: 401 NALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMT- 459
Query: 256 DSGGSDDWVKYVNLVNIY 273
G D V Y L++ Y
Sbjct: 460 KRGIQPDLVTYNTLISGY 477
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 144/364 (39%), Gaps = 28/364 (7%)
Query: 62 IFRISLPKRSAT-NVIQRWV-SEGNQATVSELRHILKELRKSQ---------------RY 104
+FR+ LP + T N++ R + S G A EL L+++ + R
Sbjct: 145 MFRLRLPLCTTTFNIMLRHLCSAGKPARALEL---LRQMPRPNAVTYNTVIAGFCSRGRV 201
Query: 105 KHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE---TYT 161
+ AL+I M + Y T I KV + + F+ + + Y
Sbjct: 202 QAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYN 261
Query: 162 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 221
AL+ Y + A +R+ + ++ YN ++ G+ + +VEE+ K
Sbjct: 262 ALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK 321
Query: 222 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 281
+ D+FTYN+ I+ N+ + + + MS G V Y +L IY +
Sbjct: 322 GLALDVFTYNILINGHCKEGNVKKALEIFENMS-RRGVRATVVTYTSL--IYALSKKGQV 378
Query: 282 AESSTLV-EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICI 340
E+ L EA + + + Y+ LI ++ GN D+ +I + + Y +
Sbjct: 379 QETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTL 438
Query: 341 LSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKN 400
+ +LG + E ++ID+ + D+ N L+ +S G + A ++ K
Sbjct: 439 MRGLCLLGRVDEARKLIDEMTKRGIQP-DLVTYNTLISGYSMKGDVKDALRIRNEMMNKG 497
Query: 401 CAPT 404
PT
Sbjct: 498 FNPT 501
>gi|357122161|ref|XP_003562784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Brachypodium distachyon]
Length = 791
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 1/116 (0%)
Query: 162 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 221
A++ +Y +K EE+ +K+S+++ + YN +M +Y +G EK ++ EIK
Sbjct: 602 AMISIYGKNGMVKKVEEILSLMKESSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSS 661
Query: 222 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
PD ++YN I + + + + EM C SG D V Y V Y+ S
Sbjct: 662 RARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKC-SGLVPDIVTYNIFVKSYVANS 716
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 3/145 (2%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
++ TY +L+H+Y+ EK E + +K S + YN M+ Y GQ+++ + +
Sbjct: 631 STATYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASRLF 690
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275
E+K +VPDI TYN+++ S A ++ + M G + Y ++ Y +
Sbjct: 691 SEMKCSGLVPDIVTYNIFVKSYVANSMFEEAIDLVRYM-VTHGCKPNERTYNTILQEYCS 749
Query: 276 ASHLVNAES--STLVEAEKSITQRQ 298
+ + +S S L E I++R+
Sbjct: 750 HGRIADGKSFISNLPELHPGISKRE 774
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 106/238 (44%), Gaps = 11/238 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T +LL +Y A+ ++A + + ++Q + + YN +++ Y+ G +E+ + EE+
Sbjct: 284 TLNSLLDVYGKARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEM 343
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ K + PD+ TY +S ID +EM +G + Y L+ + H
Sbjct: 344 EVKGIEPDVITYTTLVSGLDRAGKIDAAIGTYNEM-LRNGCKPNLCTYNALIKL-----H 397
Query: 279 LVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 334
V + ++ I + +T++ L+ ++ G ++ ++K ++ +
Sbjct: 398 GVRGKFPEMMIVFDEIRSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPER 457
Query: 335 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
Y+ ++SSY G + EI + ++ DIS N +L A + G E+A +
Sbjct: 458 DTYVSLISSYSRCGLFDQAMEIYKRMIEAGIHP-DISTYNAVLSALARGGRWEQAEKL 514
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 3/166 (1%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
+ YTAL+ + A A +F R+ + + + YN ++ +Y + K L +
Sbjct: 176 ASAYTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVLALV 235
Query: 217 EIKRKNVVP-DIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275
+ RK+ +P D +TYN IS C + K DEM +G D V +L+++Y
Sbjct: 236 DSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRA-AGFEPDKVTLNSLLDVYGK 294
Query: 276 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQI 321
A A L E E+ +TY+ LI Y G ++ Q+
Sbjct: 295 ARRYDEA-IGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQL 339
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 113/259 (43%), Gaps = 12/259 (4%)
Query: 148 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 207
+G+PL TY L+ ++A ++F+ ++ + + + N ++ +Y +
Sbjct: 241 DGIPLD---RYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYGKARR 297
Query: 208 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 267
++ V++E+++ P + TYN ISS +++ + +EM G D + Y
Sbjct: 298 YDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEV-KGIEPDVITYT 356
Query: 268 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 327
LV+ A ++A T E ++ + TY+ LI L+ G ++ ++ +R
Sbjct: 357 TLVSGLDRAGK-IDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFDEIRS 415
Query: 328 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA---TSDFDISACNRLLGAFSDVG 384
+ +L+ + G EV + + K+S D +S L+ ++S G
Sbjct: 416 AGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVS----LISSYSRCG 471
Query: 385 LTEKANEFHMLLLQKNCAP 403
L ++A E + +++ P
Sbjct: 472 LFDQAMEIYKRMIEAGIHP 490
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 45/242 (18%), Positives = 113/242 (46%), Gaps = 17/242 (7%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
+TY +L+ Y+ ++A E+++R+ ++ + + YN +++ G+ E+ + E
Sbjct: 458 DTYVSLISSYSRCGLFDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAE 517
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
++ + PD +Y+ + + A +D++K D + + + N +
Sbjct: 518 MENLDSRPDELSYSSLLHAYANAKKLDKMKSL---------SEDIYAERIESHNGLVKTL 568
Query: 278 HLVNAESSTLVEAEKSITQ--RQWITYDF-----LIILYAGLGNKDKIDQIWKSLRMTKQ 330
LVN++ + L + EK+ + R+ + D +I +Y G K+++I ++ +
Sbjct: 569 VLVNSKVNNLSDTEKAFLELRRRRCSLDINVLNAMISIYGKNGMVKKVEEILSLMKESSI 628
Query: 331 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 390
+++ Y ++ Y LG ++ I+ + K S+ + D + N ++ A+ G ++A+
Sbjct: 629 NLSTATYNSLMHMYSRLGDCEKCENILTEIK-SSRARPDRYSYNTMIYAYGRKGQMKEAS 687
Query: 391 EF 392
Sbjct: 688 RL 689
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 105/232 (45%), Gaps = 7/232 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+ LL ++ + +F+ +K+S Y +++ Y G ++ + + +
Sbjct: 424 TWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQAMEIYKRM 483
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM-SCDSGGSDDWVKYVNLVNIYITAS 277
+ PDI TYN +S+ A +Q +K EM + DS D + Y +L++ Y A
Sbjct: 484 IEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDS--RPDELSYSSLLHAYANAK 541
Query: 278 HLVNAES-STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 336
L +S S + AE+ + + L+++ + + N ++ + LR + +
Sbjct: 542 KLDKMKSLSEDIYAERIESHNGLV--KTLVLVNSKVNNLSDTEKAFLELRRRRCSLDINV 599
Query: 337 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEK 388
++S Y G +K+V EI+ K+S+ + + N L+ +S +G EK
Sbjct: 600 LNAMISIYGKNGMVKKVEEILSLMKESSI-NLSTATYNSLMHMYSRLGDCEK 650
>gi|295828268|gb|ADG37803.1| AT1G07590-like protein [Capsella grandiflora]
Length = 194
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 3/164 (1%)
Query: 193 LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 252
L+YN ++ + G+ + +A + +K +P + TY++ + A NID V K D
Sbjct: 20 LVYNRLIIRNSAPGRRKLIAKDLALMKADKAIPHVSTYHILMKLEANEHNIDGVLKAFDG 79
Query: 253 MSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL 312
M +G + V Y + + A AE+ T E EKS+T W T D L+ILY L
Sbjct: 80 MK-KAGVEPNEVSYCIVAMAHAVARLYTVAEAYT-EEIEKSVTGDNWSTLDILMILYGRL 137
Query: 313 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 356
G + ++ + W +R + S++Y+ ++ +G+L E+
Sbjct: 138 GKEKELARTWNVIR-GFHHVRSKSYLLATEAFARVGNLDRAEEL 180
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 130/340 (38%), Gaps = 12/340 (3%)
Query: 70 RSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYAT 129
+ A + V G+Q V ++ L KS AL++ M K + Y T
Sbjct: 179 KEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKM-EEKGCKPNLVAYTT 237
Query: 130 RIDLMTKVFGIHSG-----ERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVK 184
ID + K ++ E G+P T Y+ +LH + +A LF +
Sbjct: 238 IIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVT---YSTILHGFCSLGHLNEATILFNEMV 294
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
N+ N + + ++ G V + V E + +K P+ +TYN + +D
Sbjct: 295 GRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMD 354
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 304
+ +K LD M D G + Y L+N Y L A+S + +EK +T +TY
Sbjct: 355 EAQKVLDIM-VDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTP-DTVTYST 412
Query: 305 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
L+ +G + ++K + + Y +L GHL E +++ ++S
Sbjct: 413 LMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESK 472
Query: 365 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 404
DI N L+ G E A E L PT
Sbjct: 473 IEP-DIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPT 511
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 88/198 (44%), Gaps = 4/198 (2%)
Query: 78 RWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKV 137
R V G TV+ ++ L R A E+ E M K Y I+ K
Sbjct: 242 RMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEM-GGKGLAPDVFTYNILINGHCKE 300
Query: 138 FGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 195
+ FE + T TYTAL++ + ++ ++LF+ + + + ++Y
Sbjct: 301 GNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLY 360
Query: 196 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 255
N ++ + + G +++ ++ E+++K + PD TYN + +D+ +K +DEM+
Sbjct: 361 NALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMT- 419
Query: 256 DSGGSDDWVKYVNLVNIY 273
+ G D V Y L++ Y
Sbjct: 420 ERGIQPDLVTYNTLISGY 437
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 144/364 (39%), Gaps = 28/364 (7%)
Query: 62 IFRISLPKRSAT-NVIQRWV-SEGNQATVSELRHILKELRKSQ---------------RY 104
+FR+ LP + T N++ R + S G A EL L+++ + R
Sbjct: 105 MFRLRLPLCTTTFNIMLRHLCSAGKPARALEL---LRQMPRPNAVTYNTVIAGFCSRGRV 161
Query: 105 KHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE---TYT 161
+ AL+I M + Y T I KV + + F+ + + Y
Sbjct: 162 QAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYN 221
Query: 162 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 221
AL+ Y + A +R+ + ++ YN ++ G+ + +VEE+ K
Sbjct: 222 ALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK 281
Query: 222 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 281
+ PD+FTYN+ I+ N+ + + + MS G V Y L IY +
Sbjct: 282 GLAPDVFTYNILINGHCKEGNVKKALEIFENMS-RRGVRATVVTYTAL--IYALSKKGQV 338
Query: 282 AESSTLV-EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICI 340
E+ L EA + + + Y+ LI ++ GN D+ +I + + Y +
Sbjct: 339 QETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTL 398
Query: 341 LSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKN 400
+ +LG + E ++ID+ + D+ N L+ +S G + A ++ K
Sbjct: 399 MRGLCLLGRVDEARKLIDEMTERGIQP-DLVTYNTLISGYSMKGDVKDALRIRNEMMNKG 457
Query: 401 CAPT 404
PT
Sbjct: 458 FNPT 461
>gi|302761054|ref|XP_002963949.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
gi|300167678|gb|EFJ34282.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
Length = 1365
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 100/246 (40%), Gaps = 38/246 (15%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
+ + ALL LY+ AEEL + +K++ L + +YN M++LY +G ALV +
Sbjct: 787 QVFKALLALYSRETVEIDAEELVKDIKKAGLELDIDIYNHMISLYSKLGSYRNAALVFKG 846
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
++ PD T+N I + + + + L EM +K N NI
Sbjct: 847 MQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREM----------IKTGNAPNIS---- 892
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
TY LI Y L + + ++KS+ T K + Y
Sbjct: 893 -----------------------TYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAY 929
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 397
+++ Y G +++ EII+Q K ++ + L+ ++ G T KA E L
Sbjct: 930 NVMINVYRKAGEHRKIEEIIEQMKVDGFEP-SLTTIHMLMDSYGKGGATGKAEEVLETLP 988
Query: 398 QKNCAP 403
+ +P
Sbjct: 989 EIGMSP 994
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 113/260 (43%), Gaps = 15/260 (5%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
A +L + A A+ELF+R +S++ +YN +M++Y G V
Sbjct: 88 APNPRMLAVMLSVLGRANQPGLAQELFDRA-ESSIGNCVQVYNSLMSVYARHGDWNSVQQ 146
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
++ ++ + PD+ T+N+ I + + + L + +G D + Y N
Sbjct: 147 LLCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLLQDVYAAGLRPDTITY----NTL 202
Query: 274 ITASHLVNAESSTLVEAEKSITQRQ------WITYDFLIILYAGLGNKDKIDQIWKSLRM 327
I+A L N S ++ E+ QRQ W TY+ +I +Y G + I++ ++
Sbjct: 203 ISACSLNNRLSDAILIFEE--MQRQGCDPDIW-TYNAMISVYGRAGRVEAASSIFRIMQE 259
Query: 328 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 387
+ Y +L ++ G ++EV I + + S +I+ N ++ + G+
Sbjct: 260 QGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITY-NTMIHMYGKAGMHR 318
Query: 388 KANEFHMLLLQKNCAPTNAS 407
KA E ++ + ++ P + +
Sbjct: 319 KAEELYVQMKEEGRCPDSVT 338
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/228 (17%), Positives = 96/228 (42%), Gaps = 3/228 (1%)
Query: 176 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
A L + V + L + + YN +++ ++ L+ EE++R+ PDI+TYN IS
Sbjct: 180 ASSLLQDVYAAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMIS 239
Query: 236 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 295
++ M + G + D V Y ++++ + + E + + +
Sbjct: 240 VYGRAGRVEAASSIFRIMQ-EQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCS 298
Query: 296 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 355
+ ITY+ +I +Y G K ++++ ++ + S + ++ + G + E
Sbjct: 299 SDE-ITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAA 357
Query: 356 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
+ + +S + A + ++ A++ + A + +L+ P
Sbjct: 358 MFEDMLKSQVRP-TLQAFSAMICAYAKADMFTDAEHTYSCMLRAGVRP 404
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 66/152 (43%), Gaps = 2/152 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY A++ +Y A E A +F +++ + +A+ YN ++ + G++E+V + +
Sbjct: 233 TYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMM 292
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ D TYN I + ++ +M + G D V + L++ + +
Sbjct: 293 RDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMK-EEGRCPDSVTFTVLIDT-LGKAG 350
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYA 310
VN ++ + KS + + +I YA
Sbjct: 351 FVNEAAAMFEDMLKSQVRPTLQAFSAMICAYA 382
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 24/126 (19%), Positives = 55/126 (43%), Gaps = 7/126 (5%)
Query: 128 ATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN 187
A R++ + +F I + + + TY ++LH +A E+ E + ++ +
Sbjct: 244 AGRVEAASSIFRIMQEQGF-------TPDAVTYNSVLHAFARDGRIEEVERIRGMMRDAR 296
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 247
S + + YN M+ +Y G K + ++K + PD T+ + I + +++
Sbjct: 297 CSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAA 356
Query: 248 KFLDEM 253
++M
Sbjct: 357 AMFEDM 362
>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
Length = 1153
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 108/248 (43%), Gaps = 9/248 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L++ + + +A E+++ + + +S + Y+ +M + V+ V ++ E+
Sbjct: 180 TYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEM 239
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + V P++++Y + I D+ + L +M DSG D V + ++ + A
Sbjct: 240 EARGVKPNVYSYTICIRVLGQAARFDEAYQILGKME-DSGCKPDVVTHTVVIQVLCDAGR 298
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L +A+ + + S + +TY L+ G+ + +IW ++ +Y
Sbjct: 299 LSDAK-DVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYT 357
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF--HMLL 396
++ + +G L E + D+ K+ S S N L+ F + ++A E HM
Sbjct: 358 AVVDALCQVGRLDEALAVFDEMKEKGISPEQYSY-NSLISGFLKADMFDRALELFNHM-- 414
Query: 397 LQKNCAPT 404
C P+
Sbjct: 415 --NACGPS 420
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 95/209 (45%), Gaps = 9/209 (4%)
Query: 147 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 206
F+GL +S KT +Y +L+ + AE+LF +K+ + YN ++
Sbjct: 764 FKGLGVSLKTG-SYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSM 822
Query: 207 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ-VKKFLDEMSCDSGGSDDWVK 265
++E++ V E+ RK TYN IS + ++Q + + + MS G S
Sbjct: 823 RIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMS--EGFSPTPCT 880
Query: 266 YVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 325
Y L++ + A +V+AE + E + + Y+ L+ + GN + + QI++
Sbjct: 881 YGPLLDGLLKAGKMVDAE-NLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFE-- 937
Query: 326 RMTKQKMTS--RNYICILSSYLMLGHLKE 352
+M +Q + ++Y ++ + G L +
Sbjct: 938 KMVEQGINPDIKSYTVLIDTLCTAGRLND 966
Score = 41.2 bits (95), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 78/196 (39%), Gaps = 4/196 (2%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
+ T TY LL A AE LF + + N +YN ++ + G E V
Sbjct: 875 SPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQ 934
Query: 214 VVEEIKRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 272
+ E++ + + PDI +Y + I + C A D + F + + G D + Y NL+
Sbjct: 935 IFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLL--ELGLEPDLIIY-NLLID 991
Query: 273 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 332
+ S + E +K TY+ LI+ G + Q+++ L + K
Sbjct: 992 GLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKP 1051
Query: 333 TSRNYICILSSYLMLG 348
Y ++ Y + G
Sbjct: 1052 NVFTYNALIRGYSVSG 1067
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 47/245 (19%), Positives = 92/245 (37%), Gaps = 38/245 (15%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+ ++ Y + + KA + +E +K + + N +++ G++ V E+
Sbjct: 425 THVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYEL 484
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K V PD TY + I C+ D+ F +M ++G D + +L++
Sbjct: 485 KDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDM-VETGCVPDVLALNSLID------- 536
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
LY G G ++ +++ L+ K + T+ Y
Sbjct: 537 ----------------------------TLYKG-GKGNEAWKLFHQLKEMKIEPTNGTYN 567
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
+LS G +KEV ++++ S ++ N +L S G A + +
Sbjct: 568 TLLSGLGREGKVKEVMHLLEEMTHSIHPP-NLITYNTVLDCLSKNGEVNCAIGMLYSMTE 626
Query: 399 KNCAP 403
K C P
Sbjct: 627 KGCTP 631
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 101/262 (38%), Gaps = 30/262 (11%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSD-SDYATR 130
A N+ + G + + +L R + ++ +I E MV ++ + D Y
Sbjct: 897 AENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMV--EQGINPDIKSYTVL 954
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNL 188
ID + ++ G YF L + Y L+ ++ E+A LF +K+ +
Sbjct: 955 IDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGI 1014
Query: 189 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 248
N YN ++ G+ + A + EE+ K P++FTYN I + + + D
Sbjct: 1015 VPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTDNAYA 1074
Query: 249 FLDEMSCDSGGSDDWVKYVNLVNIYITA---SHLVNAESSTLVEAEKSITQRQWITYDFL 305
D C + G V+L I+ +L+N E ++ TY+ +
Sbjct: 1075 AYD---CVAVG-------VSLKTALISGLVDENLINIAEGLFAEMKRRGCGPDQFTYNLI 1124
Query: 306 IILYAGLGNKDKIDQIWKSLRM 327
+D I KS+R+
Sbjct: 1125 ------------LDAIGKSMRI 1134
>gi|225459754|ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Vitis vinifera]
Length = 531
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 96/214 (44%), Gaps = 9/214 (4%)
Query: 140 IHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE--KAEELFERVKQSNLSFNALMYNE 197
I ER F + ++ YT + + A + + +A ++F + NA+ +N
Sbjct: 266 ISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNN 325
Query: 198 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM--SC 255
+M +++ G+ EKV V ++KR PD TYN I S N+++ K L+ + C
Sbjct: 326 LMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVKKGC 385
Query: 256 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 315
+ S N + I+ VN+ + + + +TY+ L+ ++A +
Sbjct: 386 NLNASS-----FNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKST 440
Query: 316 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGH 349
D + ++ K + + + + Y ++S++ +GH
Sbjct: 441 DMVLKLRKEMDENEIEPNANTYRVLISTFCGIGH 474
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 56/338 (16%), Positives = 130/338 (38%), Gaps = 20/338 (5%)
Query: 80 VSEGNQATVSELRHILKE---LRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTK 136
+S + + + +R ++++ +R + L W +EF S Y IDL K
Sbjct: 99 ISSADSVSSAIVRRVIEKCGGVRHGIPFPQTLAFFNWATNLEEFGHSPEPYMEMIDLAGK 158
Query: 137 VFGIHSGERYFE-------GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLS 189
V + + +P+ ET+T L+ Y A +A F R++
Sbjct: 159 VRQFDLAWQLIDLMKTRNVEIPV-----ETFTILVRRYVKAGLAAEAVHAFNRMEDYGCK 213
Query: 190 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 249
+ + ++ +++ + + + +K + PD+ Y + NI + ++
Sbjct: 214 PDKIAFSVVISSLSKKRRAIEAQSFFDSLKDR-FEPDVVVYTSLVHGWCRAGNISEAERV 272
Query: 250 LDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILY 309
EM +G + Y +++ + + A E IT++ L+ ++
Sbjct: 273 FGEMKM-AGIQPNVYTYSIVIDALCRSGQITRAH-DVFSEMIDVGCDPNAITFNNLMRVH 330
Query: 310 AGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD 369
G +K+ Q++ ++ + Y ++ S+ +L+E +I++ K+ + +
Sbjct: 331 VKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVKKGC--NLN 388
Query: 370 ISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
S+ N + G S +G A+ + C P +
Sbjct: 389 ASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVT 426
>gi|357159149|ref|XP_003578355.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Brachypodium distachyon]
Length = 857
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 3/159 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+ ++A A + E A +L+ R+++ LS + Y+ M+ GQ+ + E+
Sbjct: 436 TYCTLIDIHAKAGYLEVAMDLYGRMQEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEM 495
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
P++ TYN+ I+ A N D V K +M +G D + Y ++ + H
Sbjct: 496 IENGCTPNLVTYNIIIALQAKARNYDNVVKLYRDMQV-AGFRPDKITYSIVMEVLGHCGH 554
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 317
L AE + +E + + + Y L+ L+ GN DK
Sbjct: 555 LDEAE-AVFIEMRRDWAPDEPV-YGLLVDLWGKAGNVDK 591
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 70/349 (20%), Positives = 122/349 (34%), Gaps = 41/349 (11%)
Query: 95 LKELRKSQRYKHALEISEW--MVTHKEFVLSDSDYATRIDLMTKVFGIHS-GERYFEGL- 150
LK LR ++Y H L+ +W M H L A + + + K+ H+ +F L
Sbjct: 296 LKSLRAVEQYYHTLQQMKWGPMTEHVLDSLHCKIDAFQANQVLKLLHDHTMALGFFHWLK 355
Query: 151 --PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 208
P TYT ++ + A+ L + + + YN ++ Y +
Sbjct: 356 RQPGFKHDGHTYTTMIGILGQARQFGIMRNLLHEMNRDRCKPTVVTYNRIIHAYGRANYL 415
Query: 209 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268
+ V EE++ PD TY I A ++ M + G S D Y
Sbjct: 416 REAVKVFEEMEEAGYEPDRVTYCTLIDIHAKAGYLEVAMDLYGRMQ-EVGLSPDTFTYSA 474
Query: 269 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 328
+VN L A E T +TY+ +I L A N D + ++++ +++
Sbjct: 475 MVNCLGKGGQLAAAYKLFCEMIENGCTP-NLVTYNIIIALQAKARNYDNVVKLYRDMQVA 533
Query: 329 KQKMTSRNYICILSSYLMLGHLKEV------------------GEIIDQWKQSATSD--- 367
+ Y ++ GHL E G ++D W ++ D
Sbjct: 534 GFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRRDWAPDEPVYGLLVDLWGKAGNVDKAL 593
Query: 368 ------------FDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 404
++ CN LL AF + + A +L + P+
Sbjct: 594 GWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQNMLAQGLVPS 642
>gi|356577532|ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 932
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 93/207 (44%), Gaps = 6/207 (2%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y +++ + ++AE L +++ + +Y+ MM Y +G EK +V + +K
Sbjct: 392 YGGIIYAHCQICNMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLK 451
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLD--EMSCDSGGSDDWVKYVNLVNIYITAS 277
P + +Y I+ + +V K L+ +M SG + Y L+N ++
Sbjct: 452 ECGFFPSVISYGCLIN---LYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLK 508
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
NA S + K + + Y+ +I + G+GN D+ + + ++ + + T+R +
Sbjct: 509 DWANA-FSVFEDFTKDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTF 567
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSA 364
+ I+ + G ++ EI D ++S
Sbjct: 568 LPIIHGFARAGEMRRALEIFDMMRRSG 594
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 80/187 (42%), Gaps = 2/187 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT L+ YA TEKA + F ++ L + Y ++ G+++ V +E+
Sbjct: 636 TYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEM 695
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
KN+ + F YN+ I A ++ + + +M G D Y + +N A
Sbjct: 696 SAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMR-KEGLLPDIHTYTSFINACCKAGD 754
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ A + + E E S + TY LI +A +K ++ +++ K Y
Sbjct: 755 MQKA-TEIIQEMEASGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAGFKPDKAVYH 813
Query: 339 CILSSYL 345
C+++S L
Sbjct: 814 CLVTSLL 820
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 43/235 (18%), Positives = 103/235 (43%), Gaps = 3/235 (1%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
T+ T+ ++H +A A +A E+F+ +++S YN ++ + Q+ K +
Sbjct: 562 PTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAI 621
Query: 215 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274
++E+ V P+ TY + A+ + ++ ++ + + G D Y L+
Sbjct: 622 LDEMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTVLR-NEGLEIDVYTYEALLKSCC 680
Query: 275 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 334
+ + +A + T + K+I + ++ Y+ LI +A G+ + + + +R
Sbjct: 681 KSGRMQSALAVTKEMSAKNIPRNTFV-YNILIDGWARRGDVWEAADLMQQMRKEGLLPDI 739
Query: 335 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
Y +++ G +++ EII + + S ++ L+ ++ + EKA
Sbjct: 740 HTYTSFINACCKAGDMQKATEIIQEMEASGIKP-NLKTYTTLINGWARASMPEKA 793
>gi|224133034|ref|XP_002327945.1| predicted protein [Populus trichocarpa]
gi|222837354|gb|EEE75733.1| predicted protein [Populus trichocarpa]
Length = 1450
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 112/248 (45%), Gaps = 14/248 (5%)
Query: 85 QATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGE 144
Q T ++ ++K + + + + A E+ EW+ + S A + + V G + E
Sbjct: 184 QMTPTDFCFVVKSVGQ-ESWHRAFEVYEWLNLRHWY----SPNARMLSTILAVLGKANQE 238
Query: 145 R-----YFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMM 199
+ P T + Y A++ +YA + K +ELF+ +++ + + +N ++
Sbjct: 239 PLAVEVFTRAEPSVENTVKVYNAMMGVYARSGKFNKVQELFDLMRERGCEPDLVSFNTLI 298
Query: 200 TLYMSVGQV-EKVAL-VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 257
+ G++ +A+ ++ E++R + PDI TYN IS+C+ N+++ D+M
Sbjct: 299 NARLKAGEMTPNLAIELLTEVRRSGLRPDIITYNTLISACSRASNLEEAVNVFDDMVAHH 358
Query: 258 GGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 317
D W Y ++++Y AE + E ++Y+ + +A GN +K
Sbjct: 359 CEPDLWT-YNAMISVYGRCGLSGKAE-QLFNDLESRGFFPDAVSYNSFLYAFAREGNVEK 416
Query: 318 IDQIWKSL 325
+ I + +
Sbjct: 417 VKDICEEM 424
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 10/211 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+ + A E+A +F+ + + + YN M+++Y G K + ++
Sbjct: 330 TYNTLISACSRASNLEEAVNVFDDMVAHHCEPDLWTYNAMISVYGRCGLSGKAEQLFNDL 389
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + PD +YN ++ + A N+++VK +EM G D+ + Y ++++Y
Sbjct: 390 ESRGFFPDAVSYNSFLYAFAREGNVEKVKDICEEMVKIGFGKDE-MTYNTMIHMYGKQGQ 448
Query: 279 LVNAESSTLVEAEKSITQRQ-WITYDFLIILYAGLGNKDKIDQ---IWKSLRMTKQKMTS 334
N + L KS + ITY LI LG +KI++ + + T K T
Sbjct: 449 --NDLALQLYRDMKSSGRNPDVITYTVLI---DSLGKTNKIEEAAGMMSEMLNTGVKPTL 503
Query: 335 RNYICILSSYLMLGHLKEVGEIIDQWKQSAT 365
R Y ++ Y G E E D +S T
Sbjct: 504 RTYSALICGYAKAGKPVEAEETFDCMLRSGT 534
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 80/193 (41%), Gaps = 2/193 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY A++ +Y + KAE+LF ++ +A+ YN + + G VEKV + EE+
Sbjct: 365 TYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSFLYAFAREGNVEKVKDICEEM 424
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ D TYN I D + +M SG + D + Y L++ + ++
Sbjct: 425 VKIGFGKDEMTYNTMIHMYGKQGQNDLALQLYRDMK-SSGRNPDVITYTVLID-SLGKTN 482
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ + + E + + TY LI YA G + ++ + + + + Y
Sbjct: 483 KIEEAAGMMSEMLNTGVKPTLRTYSALICGYAKAGKPVEAEETFDCMLRSGTRPDQLAYS 542
Query: 339 CILSSYLMLGHLK 351
+L +L K
Sbjct: 543 VMLDIHLRFNEPK 555
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
+TY +L+ + + E+AEELFE ++ + + Y+ MM +Y + G K +
Sbjct: 1026 DTYKSLVASFGKQQLVEQAEELFEELQSTGCKLDRSFYHIMMKIYRNSGSHSKAQRLFSM 1085
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274
+K + V P I T +L + S ++ + +K L + ++ + + Y ++++ Y+
Sbjct: 1086 MKDEGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLK-ETDANLSTLPYSSVIDAYV 1141
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/189 (16%), Positives = 89/189 (47%), Gaps = 2/189 (1%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
+ ++L +Y K ++++R+K+ L + YN ++ +Y + ++ ++++E++
Sbjct: 958 WNSVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKEGLVLMDEMR 1017
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
+ P + TY ++S ++Q ++ +E+ +G D Y ++ IY +
Sbjct: 1018 TVGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQ-STGCKLDRSFYHIMMKIYRNSGSH 1076
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 339
A+ + ++ + + T L++ Y G + +++ +L+ T +++ Y
Sbjct: 1077 SKAQRLFSMMKDEGV-EPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETDANLSTLPYSS 1135
Query: 340 ILSSYLMLG 348
++ +Y+ G
Sbjct: 1136 VIDAYVRNG 1144
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 81/180 (45%), Gaps = 19/180 (10%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
K TY ++H+Y + A +L+ +K S + + + Y ++ ++E+ A
Sbjct: 430 GKDEMTYNTMIHMYGKQGQNDLALQLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEAAG 489
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
++ E+ V P + TY+ I A + ++ D M SG D + Y +++I+
Sbjct: 490 MMSEMLNTGVKPTLRTYSALICGYAKAGKPVEAEETFDCM-LRSGTRPDQLAYSVMLDIH 548
Query: 274 ITASHLVNAESSTLVEAEKSITQRQWITYDFLI-------ILYAGLGNKDKIDQIWKSLR 326
+ + E ++++T + + +D ++ ++ LGN +K++ I + +R
Sbjct: 549 LRFN-----------EPKRAMTFYKEMIHDGIMPEHSLYELMLRTLGNANKVEDIGRVVR 597
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 52/299 (17%), Positives = 112/299 (37%), Gaps = 15/299 (5%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKE-----FVLSDSD 126
A V + +G TV + +L+ L R + E V +E F +S S
Sbjct: 834 ARAVFNTMMKDGPSPTVDSINGLLQALIVDGR------LEELYVVVQELQDIGFKISKSS 887
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVK 184
+D + I ++ + G+ + + Y + L K E + ++
Sbjct: 888 ILLMLDAFARAGNIFEVKKIYHGMKAAGYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEME 947
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
++ + ++N ++ +Y+++ K + + IK + PD TYN+ I
Sbjct: 948 EAGFKPDLSIWNSVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPK 1007
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 304
+ +DEM G Y +LV + LV E + + + Y
Sbjct: 1008 EGLVLMDEMRT-VGLEPKLDTYKSLVASF-GKQQLVEQAEELFEELQSTGCKLDRSFYHI 1065
Query: 305 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 363
++ +Y G+ K +++ ++ + T ++ SY G +E +++ K++
Sbjct: 1066 MMKIYRNSGSHSKAQRLFSMMKDEGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKET 1124
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/113 (20%), Positives = 54/113 (47%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
T TY+AL+ YA A +AEE F+ + +S + L Y+ M+ +++ + ++
Sbjct: 501 PTLRTYSALICGYAKAGKPVEAEETFDCMLRSGTRPDQLAYSVMLDIHLRFNEPKRAMTF 560
Query: 215 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 267
+E+ ++P+ Y L + + ++ + + + +M G + + Y+
Sbjct: 561 YKEMIHDGIMPEHSLYELMLRTLGNANKVEDIGRVVRDMEEVCGMNPQAISYI 613
>gi|357146655|ref|XP_003574066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g13630-like [Brachypodium distachyon]
Length = 795
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 122/272 (44%), Gaps = 23/272 (8%)
Query: 85 QATVSELRHILKELRKSQRYKH---ALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIH 141
Q V E L+E RK +R+K + + + + F+ + + LM K +G++
Sbjct: 215 QDKVGEALSFLQEARKGERFKPLGMSFNVLMSALCNWGFIQPAKSF---LCLMLK-YGLN 270
Query: 142 SGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTL 201
+RY TY+ L+H + ++A +LFERV + + + YN ++
Sbjct: 271 P-DRY------------TYSTLIHGLCKIGFLDEAVDLFERVTEEGMKLETVTYNSLING 317
Query: 202 YMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD 261
Y +G +V +++ ++ + + PDI TY + I+ + ++++ K +++ D G
Sbjct: 318 YRLLGLTREVPKIIQFMRYQGIEPDIVTYTILIAGHCESGDVEEGMKIRNDI-LDQGLQL 376
Query: 262 DWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQI 321
+ V Y L+N LV+ + L E I Y LI Y LG ++ ++
Sbjct: 377 NIVTYSVLLNALFKKG-LVHEAENLLGEIHSIGLDMDIIAYSILIHGYCKLGEIERALEV 435
Query: 322 WKSLRMTKQKM-TSRNYICILSSYLMLGHLKE 352
+ +++ + TS N++ IL G L E
Sbjct: 436 CDVMCCSQKVVPTSLNHLSILVGLCKKGLLVE 467
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 103/256 (40%), Gaps = 9/256 (3%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVK 184
Y ID K+ I + ++ + ++ T T ++L+ Y + AE F ++
Sbjct: 487 YNVVIDGYAKIGDISNAVGLYDQIVIAGMFPTIVTCNSILYGYCKCGDLQAAESYFRAIQ 546
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
S+L + Y +M G+V + ++ E+ K + P+ TY++ I L
Sbjct: 547 ISSLLPTMVTYTTLMDALSEAGKVNTMLSILYEMVEKGIKPNAITYSVVIKGLCKELRFH 606
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 304
FLD M G + D V Y L+ + + A I +TY+F
Sbjct: 607 DAIHFLDNMH-GEGVNADPVTYNTLIQGFCEVQDIQMAFHIHDRMVYCGIVPTP-VTYNF 664
Query: 305 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV----GEIIDQW 360
LI + G + + + +SLR ++ Y ++ + G E G+++D
Sbjct: 665 LINVLCLKGQVIQAEYLLESLRERGIELRKFAYTTLIKAECAKGMPYEAISLFGKLLDDG 724
Query: 361 KQSATSDFDISACNRL 376
++ DF +A NRL
Sbjct: 725 FETTVKDFS-AAINRL 739
>gi|255557995|ref|XP_002520026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540790|gb|EEF42350.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1040
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 102/233 (43%), Gaps = 9/233 (3%)
Query: 174 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 233
++AE + + + N+ + + YN + + G++ A + E + V P I TYN
Sbjct: 704 QEAENIVRKSIRENMDLDTVAYNIFIKAMLEAGRLHFAASIYEHMLSLGVTPSIQTYNTM 763
Query: 234 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 293
IS +D+ + + +C SG S D Y+N+V+ Y A N S + ++
Sbjct: 764 ISVYGRGEKLDKAVEIFN-TACSSGVSLDEKAYMNMVSYYGKAGKR-NEASLLFTKMQEE 821
Query: 294 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 353
+ ++Y+ +I ++A G + +++ +++ S Y+ ++ +Y E
Sbjct: 822 GIKPGKVSYNIMIKVFAIAGLYHEAKELFHAMQRDGWPPDSFTYLSLVQAYTESLKYSEA 881
Query: 354 GEIIDQWKQSATSDFDISAC---NRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
E ID + + +C N LL A++ GL +A + LL +P
Sbjct: 882 EETIDGMPKKGV----LPSCSHFNHLLSAYAKAGLMVEAERVYKKLLTSGLSP 930
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 97/220 (44%), Gaps = 3/220 (1%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
+TY ++ +Y + +KA E+F S +S + Y M++ Y G+ + +L+ +
Sbjct: 758 QTYNTMISVYGRGEKLDKAVEIFNTACSSGVSLDEKAYMNMVSYYGKAGKRNEASLLFTK 817
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
++ + + P +YN+ I A + K+ M D G D Y++LV Y +
Sbjct: 818 MQEEGIKPGKVSYNIMIKVFAIAGLYHEAKELFHAMQRD-GWPPDSFTYLSLVQAYTESL 876
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
AE + +K + ++ L+ YA G + ++++K L + Y
Sbjct: 877 KYSEAEETIDGMPKKGVLP-SCSHFNHLLSAYAKAGLMVEAERVYKKLLTSGLSPDLACY 935
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSATSD-FDISACNRL 376
+L YL G +++ +Q K+ A SD F +SA L
Sbjct: 936 RAMLRGYLDYGQVEKGINFFEQIKKYAESDRFIMSAAVHL 975
Score = 37.7 bits (86), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 98/239 (41%), Gaps = 4/239 (1%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
A + TYT ++ E+A ++F +K + + Y+ ++T+ G ++
Sbjct: 289 APNTFTYTVVISSLVKEGLHEEAFKVFNEMKNTGHVPEEVTYSLLITVNTKKGNWDEAGR 348
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
+ E++ +VP FT ++ + + EM +D+ V Y L+ IY
Sbjct: 349 LYEDLISHGLVPSNFTCASLLTMYYKNGDFSKALSLFMEMQSKKIAADE-VIYGLLIRIY 407
Query: 274 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
L + T E E+ TY + ++ GN +K + + ++ ++
Sbjct: 408 GKLG-LYDDAQKTFEETEQLGLLSDEKTYLAMAQVHLNSGNSEKALSVIEVMKSRNIWLS 466
Query: 334 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
YI +L Y+M L + E Q S T D +CN +L + + LTEKA F
Sbjct: 467 RFAYIVLLQCYVMKEDL-DCAEATYQ-ALSKTGLPDAGSCNDMLNLYLRLDLTEKAKTF 523
>gi|224089785|ref|XP_002308813.1| predicted protein [Populus trichocarpa]
gi|222854789|gb|EEE92336.1| predicted protein [Populus trichocarpa]
Length = 270
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 55/95 (57%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+ ALLH Y A++ + A +++ +K+ L N ++YN ++ + +G V+K + E++
Sbjct: 86 TFAALLHAYGRARYGDDAFKIYREMKEKGLGLNVVLYNSILAMCADLGHVDKAVEIFEDM 145
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
K + PD +T++ I+ + + +V+ L+EM
Sbjct: 146 KSSGIKPDSWTFSSMITIFSCCGKVSEVENTLNEM 180
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 79/163 (48%), Gaps = 2/163 (1%)
Query: 191 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 250
+A ++ ++ +Y G + V EE+K V P++ YN+ + + QVKKF
Sbjct: 13 DATTFSTLIRIYKVAGNFDGYLNVSEEMKALGVKPNLVIYNILLDAMGRAKRPWQVKKFY 72
Query: 251 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYA 310
++ D+G S +V + L++ Y A + +A EK + + Y+ ++ + A
Sbjct: 73 QDI-IDNGLSPSFVTFAALLHAYGRARYGDDAFKIYREMKEKGLGL-NVVLYNSILAMCA 130
Query: 311 GLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 353
LG+ DK +I++ ++ + K S + +++ + G + EV
Sbjct: 131 DLGHVDKAVEIFEDMKSSGIKPDSWTFSSMITIFSCCGKVSEV 173
Score = 41.2 bits (95), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 43/89 (48%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y ++L + A +KA E+FE +K S + ++ ++ M+T++ G+V +V + E+
Sbjct: 122 YNSILAMCADLGHVDKAVEIFEDMKSSGIKPDSWTFSSMITIFSCCGKVSEVENTLNEMF 181
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKK 248
P+IF I ID V K
Sbjct: 182 EAGFQPNIFILTSLIQCYGKAQRIDDVVK 210
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 105/247 (42%), Gaps = 12/247 (4%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y A++ Y GA + A L V + + +A YN ++ G+ V++E+
Sbjct: 3 YNAMVAGYCGAGQLDAARRL---VAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEML 59
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
R+ VPD+ TY + + + Q K LDEM D G + D V Y +VN I
Sbjct: 60 RRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR-DKGCTPDIVTYNVVVN-GICQEGR 117
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 339
V+ L + ++Y+ I+ GL ++ + + + QK N +
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYN---IVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 174
Query: 340 --ILSSYLMLGHLKEVG-EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 396
+L S+L L E E+++Q + + +S N LL AF +KA F L+
Sbjct: 175 FNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSY-NPLLHAFCKQKKMDKAMAFLDLM 233
Query: 397 LQKNCAP 403
+ + C P
Sbjct: 234 VSRGCYP 240
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y +L A+ E AEEL + Q N + +N +++ G VE V+E+I
Sbjct: 139 SYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQI 198
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 270
+ P+ +YN + + +D+ FLD M G D V Y L+
Sbjct: 199 PKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV-SRGCYPDIVSYNTLL 249
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 88/209 (42%), Gaps = 10/209 (4%)
Query: 143 GERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY 202
GE +G P + T + L+ E A E+ E++ + + N+L YN ++ +
Sbjct: 161 GEMGQKGCPPNVVT---FNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAF 217
Query: 203 MSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 262
+++K ++ + + PDI +YN +++ + +D + L ++ D G +
Sbjct: 218 CKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLK-DKGCAPV 276
Query: 263 WVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 322
+ Y N V +T + L E Q ITY + AGL +D+I+
Sbjct: 277 LISY-NTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYS---TIAAGLCREDRIEDAI 332
Query: 323 KSLRMTKQKMTSRNYICILSSYLMLGHLK 351
++ + N +L + ++LG K
Sbjct: 333 RAFGKVQDMGIRPNT--VLYNAIILGLCK 359
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 48/246 (19%), Positives = 93/246 (37%), Gaps = 3/246 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+ G T A + + + + + + Y ++ ++ +++E+
Sbjct: 34 TYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM 93
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ K PDI TYN+ ++ +D +FL + G + V Y ++ TA
Sbjct: 94 RDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLP-SYGCEPNTVSYNIVLKGLCTAER 152
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+AE + E + +T++ LI G + ++ + + S +Y
Sbjct: 153 WEDAE-ELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYN 211
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
+L ++ + + +D DI + N LL A G + A E L
Sbjct: 212 PLLHAFCKQKKMDKAMAFLDLMVSRGCYP-DIVSYNTLLTALCRSGEVDVAVELLHQLKD 270
Query: 399 KNCAPT 404
K CAP
Sbjct: 271 KGCAPV 276
>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Cucumis sativus]
Length = 962
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 89/205 (43%), Gaps = 2/205 (0%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y +++ Y +KAE L +++ + +Y+ MM Y VG +K LV E K
Sbjct: 419 YGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFK 478
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
+ P + TY I+ A + + + EM +G + Y L+N ++
Sbjct: 479 ECGLNPSVITYGCLINLYAKLGKVSKALEVSKEME-HAGIKHNMKTYSMLINGFLKLKDW 537
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 339
NA + + K + + Y+ +I + G+G D+ K ++ + K T+R ++
Sbjct: 538 ANA-FAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMP 596
Query: 340 ILSSYLMLGHLKEVGEIIDQWKQSA 364
I+ + G +K+ ++ D + S
Sbjct: 597 IIHGFARKGEMKKALDVFDMMRMSG 621
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 111/272 (40%), Gaps = 11/272 (4%)
Query: 123 SDSDYATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELF 180
S +Y ++ T+ +H FE + +S YT L+H YA + E+A
Sbjct: 310 SRKEYGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCV 369
Query: 181 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 240
++K+ + + + Y+ +++ + G E +E K K+ + Y I +
Sbjct: 370 RKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQR 429
Query: 241 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK---SITQR 297
N+D+ + + EM + G D +++ + + +V E L+ E+
Sbjct: 430 CNMDKAEALVREM--EEEGID---APIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNP 484
Query: 298 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 357
ITY LI LYA LG K ++ K + K + Y +++ +L L I
Sbjct: 485 SVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIF 544
Query: 358 DQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
+ + D+ N ++ AF +G ++A
Sbjct: 545 EDLIKDGIKP-DVVLYNNIITAFCGMGKMDRA 575
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 83/188 (44%), Gaps = 4/188 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT ++H YA T KA F +++ L + Y ++ G+++ V +E+
Sbjct: 663 TYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEM 722
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+N+ + F YN+ I A +I + + +M G D Y + +N A
Sbjct: 723 SAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQMK-REGVQPDIHTYTSFINACSKAGD 781
Query: 279 LVNAESSTLVEAEKSITQRQWI-TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
+ A + +E KS+ + + TY LI +A +K ++ ++++ K Y
Sbjct: 782 MQRATKT--IEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVY 839
Query: 338 ICILSSYL 345
C+++S L
Sbjct: 840 HCLMTSLL 847
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 6/131 (4%)
Query: 148 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 207
EGL L T Y ALL + + A + + + N+ N +YN ++ + G
Sbjct: 690 EGLQLDVYT---YEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGD 746
Query: 208 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVK-Y 266
+ + A +++++KR+ V PDI TY +I++C+ ++ + K ++EM S G VK Y
Sbjct: 747 IWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMK--SVGVKPNVKTY 804
Query: 267 VNLVNIYITAS 277
L+N + AS
Sbjct: 805 TTLINGWARAS 815
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 45/99 (45%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
T TY AL+ + EKAE++ + + + +S N Y +M Y S+G K
Sbjct: 625 TVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYF 684
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 254
+++ + + D++TY + +C + + EMS
Sbjct: 685 TKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMS 723
>gi|297852926|ref|XP_002894344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340186|gb|EFH70603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 650
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 72 ATNVIQRWVSEG---NQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYA 128
A V R V G N+ T S + ++L + R +EIS+ +T Y+
Sbjct: 324 AIQVFSRMVETGCRPNEYTYSLVLNLLVAEGQLVRLDGIVEISKRYMTQ-------GIYS 376
Query: 129 TRIDLMTKVFGIHSGERYFEGL---PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQ 185
+ ++K+ + R F + P+ + ++Y ++L GA T +A E+ ++ +
Sbjct: 377 YLVRTLSKLGHVSEAHRLFCDMWSFPVKGE-RDSYMSMLESLCGAGKTIEAIEMLSKIHE 435
Query: 186 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 245
+ + +MYN + + + Q+ + + E++K+ PDIFTYN+ ISS +D+
Sbjct: 436 KGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILISSFGRVGEVDE 495
Query: 246 VKKFLDEMSCDSGGSDDWVKYVNLVN 271
+E+ S D + Y +L+N
Sbjct: 496 AINIFEELE-RSDCKPDIISYNSLIN 520
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 2/147 (1%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y + K +LFE++K+ S + YN +++ + VG+V++ + EE++
Sbjct: 445 YNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILISSFGRVGEVDEAINIFEELE 504
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
R + PDI +YN I+ ++D+ EM + G + D V Y L+ + +
Sbjct: 505 RSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQ-EKGLNPDVVTYSTLMECF-GKTER 562
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLI 306
V S E Q +TY+ L+
Sbjct: 563 VEMAYSLFEEMLVKGCQPNIVTYNILL 589
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 104/240 (43%), Gaps = 11/240 (4%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
S TY LL Y ++ + KA +++ +++ + YN ++ ++ + EK V E
Sbjct: 203 SFTYKCLLQAYLRSRDSSKAFDVYCEIRRGGHKLDIFAYNMLLD---ALAKDEKACQVFE 259
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
++K+++ D ++Y + I + D+ +EM + G + + V Y L+ + +
Sbjct: 260 DMKKRHCRRDEYSYTIMIRTMGRIGKYDEAVGLFNEMITE-GLTLNVVGYNTLMQV-LAK 317
Query: 277 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 336
+V+ ++ + TY ++ L G ++D I + ++K+ MT
Sbjct: 318 GKMVDKAIQVFSRMVETGCRPNEYTYSLVLNLLVAEGQLVRLDGI---VEISKRYMTQGI 374
Query: 337 YICILSSYLMLGHLKEVGEII-DQWKQSATSDFD--ISACNRLLGAFSDVGLTEKANEFH 393
Y ++ + LGH+ E + D W + D +S L GA + E ++ H
Sbjct: 375 YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIH 434
Score = 41.2 bits (95), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 114/250 (45%), Gaps = 23/250 (9%)
Query: 148 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 207
EGL L+ Y L+ + A K +KA ++F R+ ++ N Y+ ++ L ++ GQ
Sbjct: 299 EGLTLNVVG---YNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLVLNLLVAEGQ 355
Query: 208 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK-FLDEMSCDSGGSDDWVKY 266
+ ++ +V EI ++ + I++Y + + + ++ + + F D S G D Y
Sbjct: 356 LVRLDGIV-EISKRYMTQGIYSY--LVRTLSKLGHVSEAHRLFCDMWSFPVKGERD--SY 410
Query: 267 VNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI-ILYAGLGNKDKIDQIWKSL 325
++++ A + A +E I ++ +T + +++ LG +I I
Sbjct: 411 MSMLESLCGAGKTIEA-----IEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLF 465
Query: 326 RMTKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQWKQSATSDF--DISACNRLLGAF 380
K+ S + Y ++SS+ G + EV E I+ +++ SD DI + N L+
Sbjct: 466 EKMKKDGPSPDIFTYNILISSF---GRVGEVDEAINIFEELERSDCKPDIISYNSLINCL 522
Query: 381 SDVGLTEKAN 390
G ++A+
Sbjct: 523 GKNGDVDEAH 532
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 65/140 (46%), Gaps = 3/140 (2%)
Query: 117 HKEFVLSDSD-YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWT 173
H++ V++D+ Y T + K+ I FE + + + TY L+ +
Sbjct: 434 HEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILISSFGRVGEV 493
Query: 174 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 233
++A +FE +++S+ + + YN ++ G V++ + +E++ K + PD+ TY+
Sbjct: 494 DEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTL 553
Query: 234 ISSCAATLNIDQVKKFLDEM 253
+ T ++ +EM
Sbjct: 554 MECFGKTERVEMAYSLFEEM 573
>gi|242095042|ref|XP_002438011.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
gi|241916234|gb|EER89378.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
Length = 1443
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 105/243 (43%), Gaps = 11/243 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +LL+ +A +K E E + ++ N + YN M+ +Y +G+++ + +E+
Sbjct: 365 TYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEM 424
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ PD TY + I S I + K L++M+ D+G V + L+ Y
Sbjct: 425 RAVGCTPDAVTYTVMIDSLGKMDKIAEAGKVLEDMA-DAGLKPTLVAFSALICAYAKGGR 483
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+AE T S + + Y ++ ++A G +K+ ++++++ + Y
Sbjct: 484 RADAE-KTFDCMIASGVKPDRLAYLVMLDVFARSGETEKMLRLYRTMMNDNYRPDDDMYQ 542
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
+L + +E+ EII D ++ C LG S + + + LL+
Sbjct: 543 VLLVALAKEDKCEEIEEII--------QDMEL-LCQMSLGVISTILIKARCVSQGGKLLK 593
Query: 399 KNC 401
K C
Sbjct: 594 KAC 596
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 137/342 (40%), Gaps = 18/342 (5%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSD-SDYATR 130
A V R+ EG ATV ++ +S R+ A ++ + M H + D + T
Sbjct: 207 AEEVFLRFAGEG--ATVQVFNAMMGVYARSGRFDDARQLLDTM--HDRGIDPDLVSFNTL 262
Query: 131 IDLMTKVFGIHSG---ERYFEGLPLSAKTSE-TYTALLHLYAGAKWTEKAEELFERVKQS 186
I+ +K + +G + FE + TY L+ + + E A +FE + S
Sbjct: 263 INARSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEEMIAS 322
Query: 187 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 246
+ YN M++++ G+ E+ + E+ K +PD TYN + + A N+D+V
Sbjct: 323 ECRPDLWTYNAMVSVHGRCGKAEEAERLFGELVEKGFMPDAVTYNSLLYAFAKEGNVDKV 382
Query: 247 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI 306
+ +E+ +G + + Y ++++Y L + E +TY +I
Sbjct: 383 EHTCEEL-VKAGFKKNEITYNTMIHMYGKMGRL-DLAVGLYDEMRAVGCTPDAVTYTVMI 440
Query: 307 ILYAGLGNKDKIDQIWKSLRMTKQ---KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 363
LG DKI + K L K T + ++ +Y G + + D S
Sbjct: 441 ---DSLGKMDKIAEAGKVLEDMADAGLKPTLVAFSALICAYAKGGRRADAEKTFDCMIAS 497
Query: 364 ATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 405
D A +L F+ G TEK + ++ N P +
Sbjct: 498 GVKP-DRLAYLVMLDVFARSGETEKMLRLYRTMMNDNYRPDD 538
>gi|356574297|ref|XP_003555285.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 794
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 137/322 (42%), Gaps = 22/322 (6%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFV--LSDSDYATRIDLMTKVFGIHSGERYFEGLP 151
I+K L + ++ AL + +++ T + V L+ S A + ++ K + L
Sbjct: 112 IIKGLGFNNKFDLALSLFDFIRTRNDRVSLLNGSVIAVIVSILGKTGRVSRAASLLHNLE 171
Query: 152 LSAKTSETY--TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV- 208
+ Y T+L+ YA K A ++F ++K+ + YN ++ +Y +G
Sbjct: 172 ADGFEVDVYGYTSLITAYANNKKYRDALKVFGKMKEVGCEPTLITYNAILNVYGKMGMPW 231
Query: 209 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268
K+ +V+++K + PD+ TYN IS C A ++ +E+ +G D V Y
Sbjct: 232 AKIIALVQDMKCHGLAPDLCTYNTLISCCRAGSLYEEALDLFEEIKV-AGFRPDAVTYNA 290
Query: 269 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 328
L+++Y S L + E + + +TY+ L+ Y G + + +
Sbjct: 291 LLDVY-GKSRRPKEAMEVLKQMESNSFRPSVVTYNSLVSAYVRGG-------LLEDALVL 342
Query: 329 KQKMTSRN-------YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFS 381
K+KM + Y +LS ++ G + E+ ++ ++ +I N L+ +
Sbjct: 343 KRKMVDKGIKPDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGCKP-NICTFNALIKMYG 401
Query: 382 DVGLTEKANEFHMLLLQKNCAP 403
D G E+ + + C+P
Sbjct: 402 DRGKFEEMVKVFKEIKVCKCSP 423
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 86/210 (40%), Gaps = 25/210 (11%)
Query: 84 NQATVSELRHILKELRKSQRYKHALE------ISEWMVTHKEFVLSDSDYATRIDLMTKV 137
N+ T S L H R+ +R E I V K VL +S ++DL+ +
Sbjct: 529 NEVTYSSLLHAYANGREVERMNALAEEIYSGTIKTHAVLLKTLVLVNS----KVDLLVET 584
Query: 138 FGIHSGERYF-----EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNA 192
ER F G+ TS A+L +Y K KA E+ + +S L+ +
Sbjct: 585 ------ERAFLEFRKRGISPDVTTS---NAMLSIYGRKKMVPKANEILNFMYESGLTLSL 635
Query: 193 LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 252
YN +M +Y K + EI K + PD+ +YN+ I + +D+ K+ ++E
Sbjct: 636 TSYNSLMYMYSRTENFHKSEQIFREILDKGIEPDVISYNIVIYAYCRNDMMDEAKRIIEE 695
Query: 253 MSCDSGGSDDWVKYVNLVNIYITASHLVNA 282
M + D V Y + Y S V A
Sbjct: 696 MKVPA-PVPDVVTYNTFIAAYAADSMFVEA 724
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 109/250 (43%), Gaps = 13/250 (5%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+ E+A +LFE +K + +A+ YN ++ +Y + ++ V++++
Sbjct: 252 TYNTLISCCRAGSLYEEALDLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKEAMEVLKQM 311
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + P + TYN +S+ ++ +M D G D Y L+ S
Sbjct: 312 ESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKM-VDKGIKPDVYTYTTLL------SG 364
Query: 279 LVNAESSTLV-----EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
VNA L E K + T++ LI +Y G +++ +++K +++ K
Sbjct: 365 FVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPD 424
Query: 334 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 393
+ +L+ + G EV + ++ K+S + + N L+ A+ G ++A +
Sbjct: 425 IVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAP-ERDTFNTLISAYGRCGSFDQAMAAY 483
Query: 394 MLLLQKNCAP 403
+L+ +P
Sbjct: 484 KRMLEAGVSP 493
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/253 (16%), Positives = 110/253 (43%), Gaps = 11/253 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY ALL +Y ++ ++A E+ ++++ ++ + + YN +++ Y+ G +E ++ ++
Sbjct: 287 TYNALLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKM 346
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K + PD++TY +S + + +EM G + + L+ +Y
Sbjct: 347 VDKGIKPDVYTYTTLLSGFVNAGKEELAMEVFEEMR-KVGCKPNICTFNALIKMYGDRGK 405
Query: 279 LVNAESSTLVEAEKSI----TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 334
+V+ K I +T++ L+ ++ G ++ +++ ++ ++
Sbjct: 406 F-----EEMVKVFKEIKVCKCSPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPER 460
Query: 335 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 394
+ ++S+Y G + + ++ S D+S N +L + GL E++ +
Sbjct: 461 DTFNTLISAYGRCGSFDQAMAAYKRMLEAGVSP-DLSTYNAVLATLARGGLWEQSEKVLA 519
Query: 395 LLLQKNCAPTNAS 407
+ C P +
Sbjct: 520 EMKDGGCKPNEVT 532
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 48/248 (19%), Positives = 105/248 (42%), Gaps = 5/248 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY A+L A E++E++ +K N + Y+ ++ Y + +VE++ + EEI
Sbjct: 497 TYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLLHAYANGREVERMNALAEEI 556
Query: 219 KRKNV-VPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
+ + L + + L ++ + FL+ G S D +++IY
Sbjct: 557 YSGTIKTHAVLLKTLVLVNSKVDLLVETERAFLEFRK--RGISPDVTTSNAMLSIYGRKK 614
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
+ A E +T +Y+ L+ +Y+ N K +QI++ + + +Y
Sbjct: 615 MVPKANEILNFMYESGLTL-SLTSYNSLMYMYSRTENFHKSEQIFREILDKGIEPDVISY 673
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 397
++ +Y + E II++ K A D+ N + A++ + +A + ++
Sbjct: 674 NIVIYAYCRNDMMDEAKRIIEEMKVPAPVP-DVVTYNTFIAAYAADSMFVEAIDVIRYMI 732
Query: 398 QKNCAPTN 405
++ C P +
Sbjct: 733 KQGCKPNH 740
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 106/245 (43%), Gaps = 3/245 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+ + A + AE L +++ + + + +N ++ G++E + +E+
Sbjct: 192 TYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEM 251
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
R+ + PD +YN +S + + EM+ G D V + +L++ A +
Sbjct: 252 AREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMA-QKGVVPDVVTFTSLIHAMCRAGN 310
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L A + E+ + ++ T+ LI + G D K +R + + + Y
Sbjct: 311 LERAVALVGQMRERGLRMNEF-TFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYN 369
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
+++ Y LG + E E+I + + D+ + +L + +G T+ A E + +L+
Sbjct: 370 VLINGYCKLGRMDEARELIHEMEAKGMKP-DVVTYSTILSGYCKIGDTDSAFELNRKMLK 428
Query: 399 KNCAP 403
K P
Sbjct: 429 KGVVP 433
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY++L+ + A ELFE++ Q L + Y ++ + G V+K + +E+
Sbjct: 437 TYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEM 496
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
+K V+PD+ TY++ I + + + ++ L ++ + D+ +KY L++ TA
Sbjct: 497 IKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDN-IKYEALMHCCRTA 553
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 145/364 (39%), Gaps = 28/364 (7%)
Query: 62 IFRISLPKRSAT-NVIQRWV-SEGNQATVSELRHILKELRKSQ---------------RY 104
+FR+ LP + T N++ R + S G A EL L+++ + R
Sbjct: 32 MFRLRLPLCTTTFNIMLRHLCSAGKPARALEL---LRQMPRPNAVTYNTVIAGFCSRGRV 88
Query: 105 KHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE---TYT 161
+ AL+I M + Y T I KV + + F+ + + Y
Sbjct: 89 QAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYN 148
Query: 162 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 221
AL+ Y + A +R+ + ++ YN ++ G+ + +VEE+ K
Sbjct: 149 ALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK 208
Query: 222 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 281
+ PD+FTYN+ I+ N+ + + + MS G V Y +L IY +
Sbjct: 209 GLAPDVFTYNILINGHCKEGNVKKALEIFENMS-RRGVRATVVTYTSL--IYALSKKGQV 265
Query: 282 AESSTLV-EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICI 340
E+ L EA + + + Y+ LI ++ GN D+ +I + + Y +
Sbjct: 266 QETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTL 325
Query: 341 LSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKN 400
+ +LG + E ++ID+ + D+ N L+ +S G + A ++ K
Sbjct: 326 MRGLCLLGRVDEARKLIDEMTKRGIQP-DLVTYNTLISGYSMKGDVKDALRIRNEMMNKG 384
Query: 401 CAPT 404
PT
Sbjct: 385 FNPT 388
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 13/214 (6%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
++ TY AL+H A E A+ L ++ + N +++N ++ Y G V++ +
Sbjct: 368 SAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQ 427
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275
+++K + D+F YN S D+ K L M + G S + + + L++IY
Sbjct: 428 VVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSM-VERGVSPNTMSFTTLIDIYCK 486
Query: 276 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
+ V A+ E E+ ITY+ LI Y+ GN K K ++ +R
Sbjct: 487 EGNFVEAK-RVFREMEEKGNVPNIITYNVLIDGYSKRGN-------MKEAHKLKDELENR 538
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD 369
I + + L H GE ID A FD
Sbjct: 539 GLIPDVYTCTSLIH----GECIDGKVDMALKLFD 568
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/245 (18%), Positives = 103/245 (42%), Gaps = 3/245 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT L+H ++ E+A+ LFE +++ + + +Y +++ G V++ ++ +E+
Sbjct: 301 TYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEM 360
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K ++P TY I ++ + ++EM G + V + L++ Y S
Sbjct: 361 TDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQ-GKGIDLNPVIFNTLIDGY-CESG 418
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+V+ V EK + Y+ + L KD+ + S+ + ++
Sbjct: 419 MVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFT 478
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
++ Y G+ E + + ++ +I N L+ +S G ++A++ L
Sbjct: 479 TLIDIYCKEGNFVEAKRVFREMEEKGNVP-NIITYNVLIDGYSKRGNMKEAHKLKDELEN 537
Query: 399 KNCAP 403
+ P
Sbjct: 538 RGLIP 542
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/96 (20%), Positives = 46/96 (47%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
++T L+ +Y +A+ +F +++ N + YN ++ Y G +++ + +E+
Sbjct: 476 SFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDEL 535
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 254
+ + ++PD++T I +D K DEM
Sbjct: 536 ENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMP 571
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY A + Y E+ +++ ++ N + Y ++ + ++G++E+ + EE+
Sbjct: 266 TYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEM 325
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSG 258
+ K + D++ Y IS + N+ + DEM+ D G
Sbjct: 326 REKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMT-DKG 364
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 113/257 (43%), Gaps = 4/257 (1%)
Query: 147 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 206
E L LS TY L++ +E+ +L E ++ + N++ YN M+ ++ G
Sbjct: 328 MENLKLSPDVV-TYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKG 386
Query: 207 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 266
++++V V +++ +PDI TYN IS +D+ + +DEM DD
Sbjct: 387 KMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVT-- 444
Query: 267 VNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 326
+N + + ++ L A + ++Y LII Y + ++W ++
Sbjct: 445 LNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMK 504
Query: 327 MTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLT 386
+ + Y +++ +G + + +D+ +S +I+ N ++ + G
Sbjct: 505 EKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITY-NTIIHGYCQEGQV 563
Query: 387 EKANEFHMLLLQKNCAP 403
EKA +FH +++KN P
Sbjct: 564 EKAFQFHNKMVEKNFKP 580
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 104/239 (43%), Gaps = 8/239 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +L +A +L +K L N +N ++ +G +++ A V+E +
Sbjct: 234 TYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELM 293
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ +VVPD +TYN+ IS I + + +EM + S D V Y L+N H
Sbjct: 294 SQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEME-NLKLSPDVVTYNTLINGCF--EH 350
Query: 279 LVNAESSTLV-EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
+ E L+ E E + +TY+ ++ + G D++D+ + + + Y
Sbjct: 351 GSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTY 410
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 396
++S + +G + E ++D+ + D++ N +L A K +E H LL
Sbjct: 411 NTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTL-NTMLRALCR---ERKLDEAHDLL 465
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 122/303 (40%), Gaps = 28/303 (9%)
Query: 100 KSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYF------EGLPLS 153
K R A+ + E M E + D T L+ F S E F EG +
Sbjct: 314 KQGRIAEAMRLREEM----ENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMK 369
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
S TY ++ + ++ ++ ++++S + + YN +++ + VG++++
Sbjct: 370 P-NSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFR 428
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS---GGSDDWVKYVNLV 270
+++E+ RK + D T N + + +D+ L C + G D V Y L+
Sbjct: 429 LMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLL----CSARRRGYFVDEVSYGTLI 484
Query: 271 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK----DKIDQIWKSLR 326
Y A EK I ITY+ +I +G DK+D++ +S
Sbjct: 485 IGYFKHEKASQALRLWDEMKEKEIIP-SIITYNSMIAGLCQMGKTNQAIDKLDELLES-G 542
Query: 327 MTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLT 386
+ ++T Y I+ Y G +++ + ++ + D+ CN LL G+
Sbjct: 543 LVPDEIT---YNTIIHGYCQEGQVEKAFQFHNKMVEKNFKP-DVVTCNTLLCGLCKEGML 598
Query: 387 EKA 389
EKA
Sbjct: 599 EKA 601
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 44/234 (18%), Positives = 96/234 (41%), Gaps = 3/234 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T +L + ++A +L ++ + + Y ++ Y + + + +E+
Sbjct: 444 TLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEM 503
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K K ++P I TYN I+ +Q LDE+ +SG D + Y +++ Y
Sbjct: 504 KEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDEL-LESGLVPDEITYNTIIHGYCQEGQ 562
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ A EK+ + +T + L+ G +K +++ + + + + +Y
Sbjct: 563 VEKAFQFHNKMVEKNF-KPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYN 621
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
I+ S E +++++ ++ D N +LG +D G + A EF
Sbjct: 622 TIILSLCKEKRFGEAFDLLEEMEEKKLGP-DCYTYNAILGGLTDAGRMKDAEEF 674
>gi|168054024|ref|XP_001779433.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669118|gb|EDQ55711.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 570
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/312 (20%), Positives = 128/312 (41%), Gaps = 7/312 (2%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLS 153
+LK LR+ ++++ + +I+E M + + + Y+T I + + +F+ + +
Sbjct: 49 MLKVLRRGRQWEFSQQIAEDM-ANADVRPDNITYSTLISCANRCNYQDAAMAWFDRMHEA 107
Query: 154 AKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 211
+ TY+ ++ +Y ++A L+ERVKQ+ + + Y M+ L+ G +
Sbjct: 108 GCVPDVVTYSTMIDVYGKMGKYDEAIALYERVKQAGWKPDKVTYGTMVRLFGRAGYIRAA 167
Query: 212 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
+ EE+K V PD YN+ I+ + K +EM G + V ++
Sbjct: 168 VSIFEEMKGSGVQPDAIVYNIMIACLGRAGRMGHALKVFEEME-REGVKPNAVTLSTVME 226
Query: 272 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 331
Y +++ E + + + I Y+ ++ + G + +Q + + + +
Sbjct: 227 TYSRCGNVM--EGLEVFQRLRQGVACDVIVYNAVLKMCREAGLASEAEQYLREMTESGHQ 284
Query: 332 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 391
Y ++S Y G E Q + A D+ A LL A+ + K E
Sbjct: 285 PNDWTYRNMISVYAKKGMAVEAHRTFSQMVE-AGYQIDVMAYTSLLQAYGNAKEYNKVQE 343
Query: 392 FHMLLLQKNCAP 403
+ NCAP
Sbjct: 344 ILDEMTSVNCAP 355
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 83/185 (44%), Gaps = 5/185 (2%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDS-DYATR 130
A V Q+ V +G + + I+ L K+Q A + + M+ V D Y T
Sbjct: 279 AEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRG--VKPDHVTYNTI 336
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNL 188
ID + K I E F+ + + TYT ++ A+ ++AE +F+++ +
Sbjct: 337 IDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGV 396
Query: 189 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 248
N YN ++ Y+S GQ E+V ++E+ ++ PD+FTY L + ++ +
Sbjct: 397 KPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARS 456
Query: 249 FLDEM 253
D M
Sbjct: 457 LFDSM 461
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/338 (20%), Positives = 137/338 (40%), Gaps = 11/338 (3%)
Query: 72 ATNVIQRWVSE-GNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDS--DYA 128
A +V+ R + E G + V +LK L +R + A E+ MV ++ S Y
Sbjct: 138 AMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYN 197
Query: 129 TRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNL 188
I+ + F + +S TY ++ A+ ++AE++F+++ + +
Sbjct: 198 IVINGFFNEGQVDKAYSLFLEMGVSPDVV-TYNTIIDGLCKAQEVDRAEDVFQQMVEKGV 256
Query: 189 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 248
N + YN ++ +V+ V +++ K V P TYN I +D+ +
Sbjct: 257 KPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEG 316
Query: 249 FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIIL 308
+M D G D V Y +++ A + AE +K + + +TY +I
Sbjct: 317 VFQQM-IDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGV-KPDNLTYTIIIDG 374
Query: 309 YAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDF 368
+ D+ + +++ + K + Y C++ YL G +EV + + K+ + D
Sbjct: 375 LCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEV---VQRIKEMSAHDL 431
Query: 369 --DISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 404
D+ LL G +A +++K P+
Sbjct: 432 EPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPS 469
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 85/201 (42%), Gaps = 22/201 (10%)
Query: 85 QATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGE 144
+A + E+ HI ++++ +S +VT Y T ID + K+ +
Sbjct: 518 RAMIDEVMHIFIKMKQQG-------LSPNVVT----------YGTLIDALCKLGRVDDAV 560
Query: 145 RYFEGLPLSAKTSE--TYTALLH-LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTL 201
F + T + +L++ L KW EK EELF + + + + +N ++
Sbjct: 561 LQFNQMINEGVTPNNVVFNSLVYGLCTVDKW-EKVEELFLEMLNQGIRPDIVFFNTVLCN 619
Query: 202 YMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD 261
G+V + +++ + + PD+ +YN I +D+ K LD M +G
Sbjct: 620 LCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMV-SAGLKP 678
Query: 262 DWVKYVNLVNIYITASHLVNA 282
+ V Y L++ Y A + NA
Sbjct: 679 NIVSYNTLLHGYCKAGRIDNA 699
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 15/180 (8%)
Query: 181 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 240
E V +N+ FN+L+Y +V + EKV + E+ + + PDI +N + +
Sbjct: 569 EGVTPNNVVFNSLVYG-----LCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKE 623
Query: 241 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT-QRQW 299
+ + ++ +D M C G D + Y L++ + AS + E+ L++ S +
Sbjct: 624 GRVMEARRLIDSMVC-MGLKPDVISYNTLIDGHCFASRM--DEAVKLLDGMVSAGLKPNI 680
Query: 300 ITYDFLIILYAGLGNKDKIDQIWKSLR-MTKQKMTS--RNYICILSSYLMLGHLKEVGEI 356
++Y+ L+ Y G +ID + R M ++ +T Y IL+ G E E+
Sbjct: 681 VSYNTLLHGYCKAG---RIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEAREL 737
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 37/73 (50%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y L+ + A ++A +L + + + L N + YN ++ Y G+++ + E+
Sbjct: 647 SYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREM 706
Query: 219 KRKNVVPDIFTYN 231
RK V P + TYN
Sbjct: 707 LRKGVTPGVETYN 719
>gi|224081503|ref|XP_002306437.1| predicted protein [Populus trichocarpa]
gi|222855886|gb|EEE93433.1| predicted protein [Populus trichocarpa]
Length = 462
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT L+ AK +A+ L +K+ L +A +YN +M Y + + + + +++
Sbjct: 231 TYTILIDNVCNAKNIREADRLVAVLKECGLKPDAFLYNTIMKGYCLLNKGIEAVRIYKQM 290
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K + V PD+ TYN I + + + KK L M +SG D V Y +L+N
Sbjct: 291 KEEGVEPDLVTYNTLIFGLSKCGRVSEAKKLLKIM-VESGHFPDAVTYTSLMNGMCREGD 349
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
++ A ++ L E E TY+ L+ + +K +++ ++ K+ + +Y
Sbjct: 350 VLGA-AALLEEMELKGCSPNSCTYNTLLHGFCKGRRLNKGVELYGVIKKGGMKLETASYA 408
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQS 363
+ + G + E E+ D +S
Sbjct: 409 TFVRALCREGRVAEAYEVFDYAVES 433
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 1/123 (0%)
Query: 204 SVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW 263
S G+V+ L+V+E K+ PD FTYN + + + V F+DEM D
Sbjct: 170 SAGRVDDAILLVKEFSSKHSKPDTFTYNFLVKCLCKSRIFNSVYSFIDEMKSSFDIKPDL 229
Query: 264 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 323
V Y L++ A ++ A+ V E + ++ Y+ ++ Y L + +I+K
Sbjct: 230 VTYTILIDNVCNAKNIREADRLVAVLKECGLKPDAFL-YNTIMKGYCLLNKGIEAVRIYK 288
Query: 324 SLR 326
++
Sbjct: 289 QMK 291
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 13/214 (6%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
++ TY AL+H A E A+ L ++ + N +++N ++ Y G V++ +
Sbjct: 364 SAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQ 423
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275
+++K + D+F YN S D+ K L M + G S + + + L++IY
Sbjct: 424 VVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSM-VERGVSPNTMSFTTLIDIYCK 482
Query: 276 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
+ V A+ E E+ ITY+ LI Y+ GN K K ++ +R
Sbjct: 483 EGNFVEAK-RVFREMEEKGNVPNIITYNVLIDGYSKRGN-------MKEAHKLKDELENR 534
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD 369
I + + L H GE ID A FD
Sbjct: 535 GLIPDVYTCTSLIH----GECIDGKVDMALKLFD 564
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/245 (18%), Positives = 103/245 (42%), Gaps = 3/245 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT L+H ++ E+A+ LFE +++ + + +Y +++ G V++ ++ +E+
Sbjct: 297 TYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEM 356
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K ++P TY I ++ + ++EM G + V + L++ Y S
Sbjct: 357 TDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQ-GKGIDLNPVIFNTLIDGY-CESG 414
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+V+ V EK + Y+ + L KD+ + S+ + ++
Sbjct: 415 MVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFT 474
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
++ Y G+ E + + ++ +I N L+ +S G ++A++ L
Sbjct: 475 TLIDIYCKEGNFVEAKRVFREMEEKGNVP-NIITYNVLIDGYSKRGNMKEAHKLKDELEN 533
Query: 399 KNCAP 403
+ P
Sbjct: 534 RGLIP 538
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/96 (20%), Positives = 46/96 (47%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
++T L+ +Y +A+ +F +++ N + YN ++ Y G +++ + +E+
Sbjct: 472 SFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDEL 531
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 254
+ + ++PD++T I +D K DEM
Sbjct: 532 ENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMP 567
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY A + Y E+ +++ ++ N + Y ++ + ++G++E+ + EE+
Sbjct: 262 TYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEM 321
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSG 258
+ K + D++ Y IS + N+ + DEM+ D G
Sbjct: 322 REKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMT-DKG 360
>gi|295828262|gb|ADG37800.1| AT1G07590-like protein [Capsella grandiflora]
Length = 194
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 3/164 (1%)
Query: 193 LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 252
L+YN ++ + G+ + +A + +K +P + TY++ + A NID V K D
Sbjct: 20 LVYNRLIIRNSAPGRRKLIAKDLALMKADKAIPHVSTYHILMKLEANEHNIDGVLKAFDG 79
Query: 253 MSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL 312
M +G + V Y + A AE+ T E EKS+T W T D L+ILY L
Sbjct: 80 MK-KAGVEPNEVSYCIXAMAHAVARLYTVAEAYT-EEIEKSVTGDNWSTLDILMILYGRL 137
Query: 313 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 356
G + ++ + W +R + S++Y+ ++ +G+L E+
Sbjct: 138 GKEKELARTWNVIR-GFHHVRSKSYLLATEAFARVGNLDRAEEL 180
>gi|147767652|emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]
Length = 1563
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 100/227 (44%), Gaps = 9/227 (3%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE--KAEELFERVK 184
Y + + + I ER F + ++ YT + + A + + +A ++F +
Sbjct: 1285 YTSLVHGWCRAGNISEAERVFGEMKMAGIXPNVYTYSIVIDALCRSGQITRAHDVFSEMI 1344
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
NA+ +N +M +++ G+ EKV V ++KR PD TYN I S N++
Sbjct: 1345 DVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLE 1404
Query: 245 QVKKFLDEM--SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 302
+ K L+ + C+ S N + I+ VN+ + + + +TY
Sbjct: 1405 EAVKILNSVKKGCNLNASS-----FNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTY 1459
Query: 303 DFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGH 349
+ L+ ++A + D + ++ K + + + + Y ++S++ +GH
Sbjct: 1460 NILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGH 1506
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 59/367 (16%), Positives = 129/367 (35%), Gaps = 78/367 (21%)
Query: 80 VSEGNQATVSELRHILKE---LRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTK 136
+S + + + +R ++++ +R + L W +EF S Y IDL K
Sbjct: 1131 ISSADSVSSAIVRRVIEKCGGVRHGIPFPQTLAFFNWATNLEEFGHSPEPYMEMIDLAGK 1190
Query: 137 VFGIHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERV-----KQSNLS 189
V + + + ET+T L+ Y A +A F R+ K ++
Sbjct: 1191 VRQFDLAWQLIDLMKTRNVEIPVETFTILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIA 1250
Query: 190 F-----------------------------NALMYNEMMTLYMSVGQVEKVALVVEEIKR 220
F + ++Y ++ + G + + V E+K
Sbjct: 1251 FSVVISSLSKKRRAIEAQSFFDSLKDRFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKM 1310
Query: 221 KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLV 280
+ P+++TY++ I + + I + EM D G + + + NL+ +++ A
Sbjct: 1311 AGIXPNVYTYSIVIDALCRSGQITRAHDVFSEM-IDVGCDPNAITFNNLMRVHVKA---- 1365
Query: 281 NAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICI 340
G +K+ Q++ ++ + Y +
Sbjct: 1366 --------------------------------GRTEKVLQVYNQMKRLGCPPDAITYNFL 1393
Query: 341 LSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKN 400
+ S+ +L+E +I++ K+ + + S+ N + G S +G A+ +
Sbjct: 1394 IESHCRDDNLEEAVKILNSVKKGC--NLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLK 1451
Query: 401 CAPTNAS 407
C P +
Sbjct: 1452 CRPNTVT 1458
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/298 (18%), Positives = 122/298 (40%), Gaps = 4/298 (1%)
Query: 71 SATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATR 130
+A +V+++ + G V ++ K A ++ MV K + Y+
Sbjct: 110 AAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVA-KGMRPNVVTYSAL 168
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNL 188
ID + K + E + S T + TY+AL+H A E+AE++ R+ S
Sbjct: 169 IDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGC 228
Query: 189 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 248
+ + ++Y+ ++ + G++ + ++E++++ PD+ TYN I I + +
Sbjct: 229 TPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQV 288
Query: 249 FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIIL 308
LD+M D V Y ++N + LV A+ L K+ +TY +I
Sbjct: 289 ILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQ-KLLDRMCKAGCNPDVVTYTTIIDG 347
Query: 309 YAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATS 366
G ++ + + + ++ Y ++S + E ++++ + +
Sbjct: 348 LCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCP 405
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 104/243 (42%), Gaps = 12/243 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYTAL+ +A AK E+A +L E +++ N + YN ++ + V VV+++
Sbjct: 59 TYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKM 118
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
P++ T+N + N+D +K L M G + V Y L++ +
Sbjct: 119 IEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMV-AKGMRPNVVTYSALIDGLCKSQK 177
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN-- 336
+ A+ L E + S TY LI GL DKI++ + LR + +
Sbjct: 178 FLEAK-EVLEEMKASGVTPDAFTYSALI---HGLCKADKIEEAEQMLRRMAGSGCTPDVV 233
Query: 337 -YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 395
Y I+ ++ G L E + + + ++ S D+ N ++ +G K E ++
Sbjct: 234 VYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSP-DVVTYNTVIDGLCKLG---KIAEAQVI 289
Query: 396 LLQ 398
L Q
Sbjct: 290 LDQ 292
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 60/127 (47%), Gaps = 3/127 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT ++ E+AE L + +K++ + N + Y +++ +V++ V+EE+
Sbjct: 340 TYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEM 399
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG--SDDWVKYVNLVNIYITA 276
+ P++ TYN ++ + I + ++ + M D S D Y +VN +++
Sbjct: 400 RNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMK-DGRAECSPDAATYRTIVNALMSS 458
Query: 277 SHLVNAE 283
+ AE
Sbjct: 459 DLVQEAE 465
Score = 38.1 bits (87), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 43/230 (18%), Positives = 92/230 (40%), Gaps = 10/230 (4%)
Query: 176 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
A EL E +K + + +A + ++T + G ++ ++ ++ P++ TY I+
Sbjct: 9 ALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNVVTYTALIA 65
Query: 236 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 295
+ A +++ K L+EM + G + V Y LV+ S +V A + + +
Sbjct: 66 AFARAKKLEEAMKLLEEMR-ERGCPPNLVTYNVLVDALCKLS-MVGAAQDVVKKMIEGGF 123
Query: 296 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 355
+T++ L+ + GN D ++ + + Y ++ E E
Sbjct: 124 APNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKE 183
Query: 356 IIDQWKQSATSD--FDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
++++ K S + F SA L+ E+A + + C P
Sbjct: 184 VLEEMKASGVTPDAFTYSA---LIHGLCKADKIEEAEQMLRRMAGSGCTP 230
>gi|255565671|ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536913|gb|EEF38551.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 528
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 91/212 (42%), Gaps = 4/212 (1%)
Query: 140 IHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE--KAEELFERVKQSNLSFNALMYNE 197
I ER F + ++ YT + + A + + +A ++F + N++ +N
Sbjct: 262 IPEAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEMLDVGCEPNSITFNN 321
Query: 198 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 257
++ +++ G+ EKV V ++KR PD TYN I S N+D+ K L+ M
Sbjct: 322 LLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSM-VKK 380
Query: 258 GGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 317
G S + + L I VN + ++ + +TY+ L+ ++ + D
Sbjct: 381 GCSPNASTFNGLFG-SIAKLRDVNGAHRLYAKMKELKCKANTVTYNILMRMFVDTKSTDM 439
Query: 318 IDQIWKSLRMTKQKMTSRNYICILSSYLMLGH 349
+ ++ K + + Y +++ Y +GH
Sbjct: 440 VLKLKKEMDEDDVEPNVNTYCVLIAMYCGMGH 471
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 49/252 (19%), Positives = 101/252 (40%), Gaps = 40/252 (15%)
Query: 73 TNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRID 132
TN+++ W GN + E + E++ + + Y ID
Sbjct: 250 TNLVRGWCRAGN---IPEAERVFTEMKVAGCMPNVYT-----------------YTIVID 289
Query: 133 LMTKVFGIHSGERYF-EGLPLSAKT-SETYTALLHLYAGAKWTEKAEELFERVKQSNLSF 190
+ + I F E L + + S T+ LL ++ A TEK +++ ++K+
Sbjct: 290 ALCRCGQITRAHDVFAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPP 349
Query: 191 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF- 249
+ + YN ++ + G +++ V+ + +K P+ T+N S A +++ +
Sbjct: 350 DTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCSPNASTFNGLFGSIAKLRDVNGAHRLY 409
Query: 250 --LDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV-----EAEKSITQRQWITY 302
+ E+ C + N V I V+ +S+ +V E ++ + TY
Sbjct: 410 AKMKELKCKA----------NTVTYNILMRMFVDTKSTDMVLKLKKEMDEDDVEPNVNTY 459
Query: 303 DFLIILYAGLGN 314
LI +Y G+G+
Sbjct: 460 CVLIAMYCGMGH 471
Score = 38.1 bits (87), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 49/284 (17%), Positives = 109/284 (38%), Gaps = 14/284 (4%)
Query: 133 LMTKVFGIHSGERYFEGL---------PLSAKTSETYTALLHLYAGAKWTEKAEELFERV 183
++ K + G +F+ L P E Y ++ L + + ++ + +
Sbjct: 109 VIEKCAAVRHGIPFFQALSFFNWATSRPGFTHHPEPYNEMIDLAGKVRNFDLGWQVIDLM 168
Query: 184 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 243
K N+ + ++ ++ Y+ G + ++ N PD +++ IS
Sbjct: 169 KARNVEISIETFSILIRRYVRAGLASEAVHAFNRMEDYNCKPDKIAFSILISILCRKRRA 228
Query: 244 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 303
+ + F D + D + Y NLV + A ++ AE E + + TY
Sbjct: 229 TEAQSFFDSLK--DKFEPDVIVYTNLVRGWCRAGNIPEAE-RVFTEMKVAGCMPNVYTYT 285
Query: 304 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 363
+I G + ++ + + S + +L ++ G ++V ++ +Q K+
Sbjct: 286 IVIDALCRCGQITRAHDVFAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRM 345
Query: 364 ATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
D N L+ + G ++A + +++K C+P NAS
Sbjct: 346 GCPP-DTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCSP-NAS 387
>gi|302782984|ref|XP_002973265.1| hypothetical protein SELMODRAFT_98793 [Selaginella moellendorffii]
gi|300159018|gb|EFJ25639.1| hypothetical protein SELMODRAFT_98793 [Selaginella moellendorffii]
Length = 389
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 121/260 (46%), Gaps = 36/260 (13%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
KT TY +LL A A E + LF+++ + ++ + +N ++ + Q++ +
Sbjct: 68 KTIVTYNSLLQACAAALEIEHTKNLFDKMPE----WDIVSWNILLAAFAENKQLD----L 119
Query: 215 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274
V++ R+ DI ++ L +++ A + +++ K+F D+M GS D V ++ ++
Sbjct: 120 VKDCFRRMPESDIVSWYLMLTTLAQSDRVEECKEFFDKMPEWHLGSPDVVSCNAMIAGFV 179
Query: 275 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 334
H V AE S++QR +T++ +I LYA G+ +I+ M
Sbjct: 180 ENGHFVQAEMMY-----GSMSQRDRVTHNTMIALYARNGDMPTARRIFDG-------MPE 227
Query: 335 RNYIC---ILSSYLMLGHLKEVGEIIDQWKQS--ATSDF---DI-SACNRLLGAFSDVGL 385
R+ C ++S Y GH ++ ++ + A ++F DI SACN GL
Sbjct: 228 RDMACWAGVISGYAQAGHPRDAIDLFRAMEMEGLAPNEFLFTDILSACNH-------TGL 280
Query: 386 TEKANEFHMLLLQKNCAPTN 405
++ + L+ +++ P +
Sbjct: 281 VRESWRYFALMAREHAIPPS 300
>gi|295828264|gb|ADG37801.1| AT1G07590-like protein [Capsella grandiflora]
Length = 194
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 3/164 (1%)
Query: 193 LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 252
L+YN ++ + G+ + +A + +K +P + TY++ + A NID V K D
Sbjct: 20 LVYNRLIIRNSAPGRRKLIAKDLALMKADKAIPHVSTYHILMKLEANEHNIDGVLKAFDG 79
Query: 253 MSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL 312
M +G + V Y + A AE+ T E EKS+T W T D L+ILY L
Sbjct: 80 MK-KAGVEPNEVSYCIXAMAHAVARLYTVAEAYT-EEIEKSVTGDNWSTLDILMILYGRL 137
Query: 313 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 356
G + ++ + W +R + S++Y+ ++ +G+L E+
Sbjct: 138 GKEKELARTWNVIR-GFHHVRSKSYLLATEAFARVGNLDRAEEL 180
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 145/342 (42%), Gaps = 17/342 (4%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEIS---EWMVTHKEFVLSDSDYA 128
A +V+ + + G + V + ++ + R A+++ E M + V+ Y
Sbjct: 123 ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVI----YN 178
Query: 129 TRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALL-HLYAGAKWTEKAEELFERVKQ 185
T ID K+ ++ F+ + ++ TY +L+ L +W++ A + + V +
Sbjct: 179 TIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR 238
Query: 186 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 245
++ N + + ++ +++ G+ + + EE+ R+ V PD+FTYN I+ +D+
Sbjct: 239 -DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDE 297
Query: 246 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFL 305
K+ LD M G D V Y L+N + S V+ + E + ITY+ +
Sbjct: 298 AKQMLDLMV-TKGCLPDVVTYNTLINGF-CKSKRVDEGTKLFREMAQRGLVGDTITYNTI 355
Query: 306 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 365
I Y G D +I+ + + R Y +L M +++ + + ++S
Sbjct: 356 IQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEI 412
Query: 366 SDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
+ DI+ N ++ +G E A + L K P S
Sbjct: 413 -ELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVS 453
>gi|449484422|ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 130/304 (42%), Gaps = 26/304 (8%)
Query: 64 RISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLS 123
R LP+ A R G +A V +L +L L K + HA + + + + F S
Sbjct: 163 RADLPQ-DAIRAFNRMGEFGIRAGVDDLDKLLYTLCKRKHVAHAQQFFDKVKS--VFNPS 219
Query: 124 DSDYATRIDLMTKVFGI----HSGERYFEGLPLSAKTSET--YTALLHLYAGAKWTEKAE 177
Y+ ++T+ +G+ ++ ++ F+ + + Y +LL ++A
Sbjct: 220 VKTYS----ILTRGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAY 275
Query: 178 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 237
++F + + + +A Y+ + + V V+E KRKN++P++FTYN I
Sbjct: 276 KMFLEMDSNGVDPDADTYSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKL 335
Query: 238 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 297
N+++ + LDEM D W N + Y VN+ + + ++
Sbjct: 336 CKDQNVEEAYQILDEMIERGVTPDTWS--YNAIQAYHCDHSEVNSALNLVKRMDRDKCVP 393
Query: 298 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 357
TY+ ++ L +G D+ +++W+S M R + +S+Y ++ H G
Sbjct: 394 DKHTYNMVLKLLVRVGRFDRANEVWES-------MGKRGFYPSVSTYAVMIH----GFCK 442
Query: 358 DQWK 361
+WK
Sbjct: 443 KKWK 446
>gi|302809589|ref|XP_002986487.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
gi|300145670|gb|EFJ12344.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
Length = 773
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/311 (19%), Positives = 124/311 (39%), Gaps = 45/311 (14%)
Query: 95 LKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRID--LMTKVFGIHSGERYFEGLPL 152
L +L +++ +T ++F L ++A R D ++F +Y +
Sbjct: 24 LSQLPPRGSVTRCMDLYRSKLTMQDFSLIFREFAARSDWHRALRLF------KYMQRQQW 77
Query: 153 SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVA 212
T YT ++ + EK E+FE + ++++ +N + ++ Y GQ E
Sbjct: 78 CKPTEHIYTIMIGIMGREGLLEKCSEIFEDMPENDVKWNVYAFTALINAYGRNGQYEASL 137
Query: 213 LVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 272
++ +K++ V P++ TYN +++C S G DW L+N+
Sbjct: 138 HLLARMKKERVEPNLITYNTVLNAC-------------------SKGGLDW---EGLLNL 175
Query: 273 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 332
+ H Q ITY+ L+ + G ++ ++K++ +
Sbjct: 176 FAQMRH--------------EGIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNESGVVA 221
Query: 333 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
+ Y ++ ++ L V E++ + + S DI+ N L+ A++D G A
Sbjct: 222 DAVTYKSLVDTFAGSNQLGRVEELLREMEDEGNSP-DIAGYNSLIEAYADAGNVHGAAGV 280
Query: 393 HMLLLQKNCAP 403
+ + CAP
Sbjct: 281 FKQMQRGGCAP 291
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 108/281 (38%), Gaps = 4/281 (1%)
Query: 125 SDYATRIDLMTKVFGIHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFER 182
+ Y + I+ +H F+ + A ETY+ LL +Y E+ LF
Sbjct: 259 AGYNSLIEAYADAGNVHGAAGVFKQMQRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSD 318
Query: 183 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 242
+K+ + YN ++ ++ G ++ + ++ V PD TY+ +S C
Sbjct: 319 MKELSTPPTVATYNSLIQVFGEGGYFQESINLFHDMVDSGVKPDDATYSALLSVCGRGGL 378
Query: 243 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 302
+ K M + + L++ Y + +A S E + Q Y
Sbjct: 379 TREAAKIHQHMLTNE-STPSLEASAGLISSYGKMAMYKDALVSYYRIREAGLDP-QVSAY 436
Query: 303 DFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ 362
D LI YA G + ++ + + ++ +Y +G E E + +Q
Sbjct: 437 DALIQGYAKGGLYVEAGSTLYAMNKAGFQAPVSSVNSVMEAYSKVGLHDEALEFFSELQQ 496
Query: 363 SATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
S+ D LLG + D+GL E+A E +++ + + P
Sbjct: 497 KEGSEVDERTHETLLGVYCDMGLLEEAKEEFVIIKETSKVP 537
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 103/286 (36%), Gaps = 58/286 (20%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +L+ +AG+ + EEL ++ S + YN ++ Y G V A V +++
Sbjct: 225 TYKSLVDTFAGSNQLGRVEELLREMEDEGNSPDIAGYNSLIEAYADAGNVHGAAGVFKQM 284
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS------------------------ 254
+R PD+ TY+ + +QV+ +M
Sbjct: 285 QRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKELSTPPTVATYNSLIQVFGEGGYF 344
Query: 255 ----------CDSGGSDDWVKYVNLVNIYITAS----------HLVNAESSTLVEAEKSI 294
DSG D Y L+++ H++ ES+ +EA
Sbjct: 345 QESINLFHDMVDSGVKPDDATYSALLSVCGRGGLTREAAKIHQHMLTNESTPSLEASAG- 403
Query: 295 TQRQWITYDFLIILYAGLGN-KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 353
LI Y + KD + ++ +R Y ++ Y G E
Sbjct: 404 ----------LISSYGKMAMYKDALVSYYR-IREAGLDPQVSAYDALIQGYAKGGLYVEA 452
Query: 354 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 399
G + + A +S+ N ++ A+S VGL ++A EF L QK
Sbjct: 453 GSTLYAMNK-AGFQAPVSSVNSVMEAYSKVGLHDEALEFFSELQQK 497
>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Glycine max]
Length = 1024
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 10/163 (6%)
Query: 168 AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 227
GA +KA E+ + + Y++++ +VEK L+ EE+K+ +VP +
Sbjct: 429 CGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSV 488
Query: 228 FTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAE--- 283
+TY + I S C A L I Q + + DEM D+ + + V Y +L++ Y+ A + +A
Sbjct: 489 YTYTILIDSFCKAGL-IQQARNWFDEMLRDN-CTPNVVTYTSLIHAYLKARKVFDANKLF 546
Query: 284 SSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 326
L+E K +TY LI + G DK QI+ ++
Sbjct: 547 EMMLLEGSKP----NVVTYTALIDGHCKAGQIDKACQIYARMQ 585
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 47/94 (50%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
YT ++ TE+A L ++++ N + Y M+ + +G++E+ + ++
Sbjct: 717 YTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMC 776
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
K P+ TY + I+ C +T +D+ + LDEM
Sbjct: 777 SKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEM 810
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 66/330 (20%), Positives = 127/330 (38%), Gaps = 34/330 (10%)
Query: 98 LRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA--K 155
L + ++ A EI M++ K FV DS Y+ I + + FE + +
Sbjct: 428 LCGAGKFDKAFEIICEMMS-KGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVP 486
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
+ TYT L+ + A ++A F+ + + N + N + Y ++ Y+ +V +
Sbjct: 487 SVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLF 546
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD-------------- 261
E + + P++ TY I ID+ + M D SD
Sbjct: 547 EMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCET 606
Query: 262 -DWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQ 320
+ + Y LV+ A+ + A + Q I YD LI + G + +
Sbjct: 607 PNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQ-IVYDALIDGFCKTGKLENAQE 665
Query: 321 IWKSLRMTKQKMTSRNYICILSSY--LMLGHLKE-----VGEIIDQWKQSATSDFDISAC 373
++ KM+ R Y L +Y L+ KE V +++ + +++ + ++
Sbjct: 666 VF-------VKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTP-NVVIY 717
Query: 374 NRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
++ VG TE+A + + + C P
Sbjct: 718 TDMIDGLCKVGKTEEAYRLMLKMEEVGCYP 747
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 45/252 (17%), Positives = 113/252 (44%), Gaps = 17/252 (6%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY++L++ K + ++ ++ +++ + N ++Y +M+ VG+ E+ ++ ++
Sbjct: 681 TYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKM 740
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ P++ TY I I+Q + +M C G + +++ Y L+N + ++
Sbjct: 741 EEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDM-CSKGCAPNFITYRVLIN-HCCSTG 798
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQI--WKSLRMTKQKMTSRN 336
L++ L E +++ R +Y +I + N++ I I L +
Sbjct: 799 LLDEAHRLLDEMKQTYWPRHISSYRKIIEGF----NREFITSIGLLDELSENESVPVESL 854
Query: 337 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNR-----LLGAFSDVGLTEKANE 391
Y ++ +++ G L+ ++++ S + ++ N+ L+ + S +KA E
Sbjct: 855 YRILIDNFIKAGRLEGALNLLEEISSSPS----LAVANKYLYTSLIESLSHASKVDKAFE 910
Query: 392 FHMLLLQKNCAP 403
+ ++ KN P
Sbjct: 911 LYASMINKNVVP 922
>gi|168045490|ref|XP_001775210.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673423|gb|EDQ59946.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 404
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/317 (20%), Positives = 134/317 (42%), Gaps = 17/317 (5%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLS 153
+L EL++ ++ LE+ W + + Y I + + +H+ F+ + L
Sbjct: 16 VLTELQRQHDWRCTLEVFSWSKKQSWYCPNSRLYTRLIGFLGREGRVHNATLLFQEMLLE 75
Query: 154 AKTSE--TYTALLHLYAGAKWTEKAEELFERVKQS---NLSFNALMYNEMMTLYMSVGQV 208
++ TYTAL++ Y AK E+A +F +K+S N N + N ++ + G
Sbjct: 76 KCQADQYTYTALVNAYGKAKMFEEALAVFSHMKESNEPNCQPNTVTCNALIDALVKGGLY 135
Query: 209 EKVALVVEEIK------RKNVVPDIFTYNLWISSCAATLNID---QVKKFLDEMSCDSGG 259
++ V +++ P++ TYN+ I + +D +V +++ + + D
Sbjct: 136 DQAIQVFFDMRDGTNGLEHGCEPNVITYNVLIDALCKEGLLDIGMKVLQYMRDGNTDQSV 195
Query: 260 SDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID 319
+ Y L+N AE + E + Q ITY LI Y G + +
Sbjct: 196 QPNSATYNTLINACGKGGLYEKAEELVDLMVEHGV-QPDHITYTALIDAYGKAGLWENAE 254
Query: 320 QIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGA 379
+K ++ T + Y ++ +Y G ++ E+ + S ++ + L+ A
Sbjct: 255 NTFKGMKGTNVSVDVMAYTAMIDAYGREGLYQKAEEMFKMMQHSGLRPNQVTYLS-LMEA 313
Query: 380 FSDVGLTEKA-NEFHML 395
+ GL E++ N F+++
Sbjct: 314 YGKAGLPEESRNVFNIM 330
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 43/80 (53%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +L+ Y A E++ +F +++S N L+Y+ ++ Y G + A +++ +
Sbjct: 306 TYLSLMEAYGKAGLPEESRNVFNIMRESGYEGNVLIYSSLIDAYGKAGNYLEAARMLDMM 365
Query: 219 KRKNVVPDIFTYNLWISSCA 238
+R P++ TY+ +SSC
Sbjct: 366 RRAGCQPNLITYSAILSSCC 385
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 69/148 (46%), Gaps = 2/148 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYTAL+ Y A E AE F+ +K +N+S + + Y M+ Y G +K + + +
Sbjct: 236 TYTALIDAYGKAGLWENAENTFKGMKGTNVSVDVMAYTAMIDAYGREGLYQKAEEMFKMM 295
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + P+ TY + + ++ + + M +SG + + Y +L++ Y A +
Sbjct: 296 QHSGLRPNQVTYLSLMEAYGKAGLPEESRNVFNIMR-ESGYEGNVLIYSSLIDAYGKAGN 354
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLI 306
+ A + L ++ Q ITY ++
Sbjct: 355 YLEA-ARMLDMMRRAGCQPNLITYSAIL 381
>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 81/187 (43%), Gaps = 15/187 (8%)
Query: 85 QATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGE 144
++ V H K + S +KH E M+ K + D + K+ G H E
Sbjct: 52 ESCVPLALHFFKSIANSNLFKHTPLTFEVMI-RKLAMDGQVDSVQYLLQQMKLQGFHCSE 110
Query: 145 RYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMS 204
F +++ +Y E+A E+F R+K+ + +YN ++ +
Sbjct: 111 DLF-------------ISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLG 157
Query: 205 VGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWV 264
+++ + +V ++KR P++FTYN+ + + +D KK L EMS + G + V
Sbjct: 158 ENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMS-NKGCCPNAV 216
Query: 265 KYVNLVN 271
Y +++
Sbjct: 217 SYTTVIS 223
>gi|449469288|ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 130/304 (42%), Gaps = 26/304 (8%)
Query: 64 RISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLS 123
R LP+ A R G +A V +L +L L K + HA + + + + F S
Sbjct: 163 RADLPQ-DAIRAFNRMGEFGIRAGVDDLDKLLYTLCKRKHVAHAQQFFDKVKS--VFNPS 219
Query: 124 DSDYATRIDLMTKVFGI----HSGERYFEGLPLSAKTSET--YTALLHLYAGAKWTEKAE 177
Y+ ++T+ +G+ ++ ++ F+ + + Y +LL ++A
Sbjct: 220 VKTYS----ILTRGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAY 275
Query: 178 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 237
++F + + + +A Y+ + + V V+E KRKN++P++FTYN I
Sbjct: 276 KMFLEMDSNGVDPDADTYSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKL 335
Query: 238 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 297
N+++ + LDEM D W N + Y VN+ + + ++
Sbjct: 336 CKDQNVEEAYQILDEMIERGVTPDTWS--YNAIQAYHCDHSEVNSALNLVKRMDRDKCVP 393
Query: 298 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 357
TY+ ++ L +G D+ +++W+S M R + +S+Y ++ H G
Sbjct: 394 DKHTYNMVLKLLVRVGRFDRANEVWES-------MGKRGFYPSVSTYAVMIH----GFCK 442
Query: 358 DQWK 361
+WK
Sbjct: 443 KKWK 446
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 122/322 (37%), Gaps = 22/322 (6%)
Query: 93 HILKELRKSQR---YKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVF-------GIHS 142
H++K L +S R Y +L E MV D Y + L TK+ I
Sbjct: 71 HLMKLLNRSCRAGKYNESLYFLECMV--------DKGYTPDVILCTKLIKGFFNSRNIGK 122
Query: 143 GERYFEGLPLSAKTSE-TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTL 201
R E L K Y AL+ + A E A + +R+K + + YN M+
Sbjct: 123 ATRVMEILERYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGS 182
Query: 202 YMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD 261
+ S G+++ + EE+ + N P + TY + I + ID K LDEM G
Sbjct: 183 FCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEM-LSKGLEP 241
Query: 262 DWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQI 321
D + Y N + + +V+ L + ITY+ L+ G + +++
Sbjct: 242 DTLTY-NAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKL 300
Query: 322 WKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFS 381
+ K + ++ + G ++E ++ K+ D + L+ F
Sbjct: 301 ISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKP-DAYCYDPLIAGFC 359
Query: 382 DVGLTEKANEFHMLLLQKNCAP 403
G + A EF ++ C P
Sbjct: 360 REGRLDLATEFLEYMISDGCLP 381
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 113/262 (43%), Gaps = 12/262 (4%)
Query: 148 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 207
E P ++ + ALL GAK + AE+ F + +S + +N +++ +GQ
Sbjct: 147 ESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQ 206
Query: 208 VEKVALVVEEIKRKNVVPDIFTYNLWISS-C--AATLNIDQVKKFLDEMSCDSGGSDDWV 264
+ K V ++IK + P + TYN I C N+ V L EM ++G S V
Sbjct: 207 LRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEM-VEAGISPTAV 265
Query: 265 KYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS 324
+ L+N Y S+ A E ++ +TY+ LI +GL ++ K+++ K
Sbjct: 266 TFGVLINGYCKNSNTA-AAVRVFEEMKQQGIAASVVTYNSLI---SGLCSEGKVEEGVKL 321
Query: 325 LRMTKQKMTSRNYI---CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFS 381
+ + S N I C+L + G + + + ID + + D+ N L+ +
Sbjct: 322 MEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTER-NVEPDVVIYNILIDVYR 380
Query: 382 DVGLTEKANEFHMLLLQKNCAP 403
+G E A + +K +P
Sbjct: 381 RLGKMEDAMAVKEAMAKKGISP 402
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/201 (18%), Positives = 87/201 (43%), Gaps = 2/201 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+ +L + A + + + + N+ + ++YN ++ +Y +G++E V E +
Sbjct: 336 TFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAM 395
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+K + P++ TYN I+ + + + LDEM + G D V Y L+
Sbjct: 396 AKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMK-EKGIEADVVTYNVLIGALCCKGE 454
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ A L E + + +TY+ +I + GN +I + +++ Y
Sbjct: 455 VRKA-VKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYN 513
Query: 339 CILSSYLMLGHLKEVGEIIDQ 359
+ + +G + E +++++
Sbjct: 514 VFIKYFCQIGKMDEANDLLNE 534
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 76/167 (45%), Gaps = 4/167 (2%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y L+ +Y E A + E + + +S N YN ++T + G + +++E+K
Sbjct: 372 YNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMK 431
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
K + D+ TYN+ I + + + K LDEMS + G + + Y ++ + ++
Sbjct: 432 EKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMS-EVGLEPNHLTYNTIIQGFCDKGNI 490
Query: 280 VNA-ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 325
+A E T EK + +TY+ I + +G D+ + + +
Sbjct: 491 KSAYEIRT--RMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEM 535
>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 100/234 (42%), Gaps = 9/234 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+ +LL + + E A L + + + YN ++ GQ++ ++ E+
Sbjct: 185 TFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEM 244
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
KN++P++ TY+ I A +D + +EM G S D V Y L++IY
Sbjct: 245 PAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKF-LGISLDRVSYNTLLSIYAKLGR 303
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN-- 336
A E E S ++ +TY+ L+ G G + K D + K K + S N
Sbjct: 304 FEEA-MDVCREMENSGIRKDVVTYNALL---GGYGKQYKYDVVRKVFEEMKARHVSPNLL 359
Query: 337 -YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
Y ++ Y G +E ++ ++K++ D+ + L+ A GL E A
Sbjct: 360 TYSTLIDVYSKGGLYREAMDVFREFKKAGLKA-DVVLYSALIDALCKNGLVESA 412
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY ALL Y + ++FE +K ++S N L Y+ ++ +Y G + V E
Sbjct: 325 TYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREF 384
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
K+ + D+ Y+ I + ++ LDEM+ G + V Y ++++ +
Sbjct: 385 KKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT-KEGIRPNVVTYNSIIDAF 438
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 7/200 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
YT L+ A A+ E+A EL ++++ ++ ++ G+VE +V+E+
Sbjct: 184 AYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEV 243
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K + PDI YN+ I N+D KF E+ DD V Y +++ + A
Sbjct: 244 KGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDD-VSYTSMIWVLCKAGR 302
Query: 279 LVNAES-STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
L AE +E E+++ Y+ +I+ G G+ + + +K L K++ +
Sbjct: 303 LSEAEELFGQMETERAVPCAY--AYNTMIM---GYGSAGQFENAYKLLDQLKERGCIPSV 357
Query: 338 ICILSSYLMLGHLKEVGEII 357
+ S LG ++V E +
Sbjct: 358 VSFNSILTCLGKKRKVDEAL 377
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 71/362 (19%), Positives = 142/362 (39%), Gaps = 49/362 (13%)
Query: 68 PKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWM---VTHKEFVLSD 124
P+R A ++++ G + V +++ L + R + AL + + + + VL
Sbjct: 198 PER-ALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVL-- 254
Query: 125 SDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFER 182
Y ID K + ++F L + +YT+++ + A +AEELF +
Sbjct: 255 --YNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQ 312
Query: 183 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 242
++ A YN M+ Y S GQ E +++++K + +P + ++N ++
Sbjct: 313 METERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRK 372
Query: 243 IDQVKKFLD-----------------EMSCDSGGSDDWVK----------YVNLVNIYIT 275
+D+ + +M C +G ++ + NL+ + I
Sbjct: 373 VDEALTLFEAMKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIM 432
Query: 276 ASHLVNAES-STLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKID---QIWKSLRM 327
L A+ E ++ +QR +TY LI GLG K +D ++++++
Sbjct: 433 VDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLI---DGLGKKGNVDDAYRLFENMLD 489
Query: 328 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 387
T Y ++ ++ M G KE G I + D++ N + G E
Sbjct: 490 TGHNANPVVYTSLIRNFFMHGR-KEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVE 548
Query: 388 KA 389
K
Sbjct: 549 KG 550
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
T TY +++ A ++A LFE K + N ++Y+ ++ + VG++++ L
Sbjct: 633 PPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYL 692
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK---KFLDEMSCDSGGSDDWVKYVNLV 270
++EE+ +K + P+++T+N + + I++ + + EM C S + Y L+
Sbjct: 693 ILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKC----SPNTYTYSILI 748
Query: 271 N 271
N
Sbjct: 749 N 749
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Query: 129 TRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQS 186
T +D + K + G FE + + +Y+ L+H A + +F +KQ
Sbjct: 536 TYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQ 595
Query: 187 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 246
+ +A YN ++ + G+++K V+EE+K K V P + TY I A +D+
Sbjct: 596 GFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEA 655
Query: 247 KKFLDE 252
+E
Sbjct: 656 YMLFEE 661
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 53/271 (19%), Positives = 107/271 (39%), Gaps = 11/271 (4%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLS 153
++ L K+++++ A E+ E + + + Y + ID + K + R FE + +
Sbjct: 432 MVDRLCKAKKFEPAYEMFE-TASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDT 490
Query: 154 AKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 211
+ YT+L+ + E ++F+ + + + + N M G VEK
Sbjct: 491 GHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKG 550
Query: 212 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
+ E+IK +PD+ +Y++ I + M G + D Y +V+
Sbjct: 551 RAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMK-QQGFALDARAYNAVVD 609
Query: 272 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 331
+ + L A L E + TY +I GL D++D+ + K K
Sbjct: 610 GFCKSGKLDKA-YEVLEEMKVKRVPPTVATYGSII---DGLAKIDRLDEAYMLFEEAKSK 665
Query: 332 MTSRNYIC---ILSSYLMLGHLKEVGEIIDQ 359
N I ++ + +G + E I+++
Sbjct: 666 GIELNVIVYSSLIDGFGKVGRIDEAYLILEE 696
Score = 37.7 bits (86), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 98/262 (37%), Gaps = 4/262 (1%)
Query: 147 FEGLPLSAKT-SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSV 205
FE + A+ S TY ++ + A E+A + + ++ + L N L N M+
Sbjct: 380 FEAMKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKA 439
Query: 206 GQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVK 265
+ E + E ++ P+ TY I N+D + + M D+G + + V
Sbjct: 440 KKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENM-LDTGHNANPVV 498
Query: 266 YVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 325
Y +L+ + + E + Q + + G+ +K I++ +
Sbjct: 499 YTSLIRNFFMHGRKEDGH-KIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDI 557
Query: 326 RMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGL 385
+ R+Y ++ G +E I KQ + D A N ++ F G
Sbjct: 558 KGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFA-LDARAYNAVVDGFCKSGK 616
Query: 386 TEKANEFHMLLLQKNCAPTNAS 407
+KA E + K PT A+
Sbjct: 617 LDKAYEVLEEMKVKRVPPTVAT 638
>gi|308082018|ref|NP_001183846.1| uncharacterized protein LOC100502439 [Zea mays]
gi|238014984|gb|ACR38527.1| unknown [Zea mays]
gi|414872746|tpg|DAA51303.1| TPA: hypothetical protein ZEAMMB73_971718 [Zea mays]
Length = 623
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT ++H A T++A + F++VKQ + +A YN ++ + G+++ VVEE+
Sbjct: 373 TYTIVMHALGKAGRTQEALDTFDKVKQDGCALDASFYNCLIYILCRAGRLQDANFVVEEM 432
Query: 219 KRKNVVPDIFTYNLWIS-SCAATLNIDQVKKF--LDEMSCDS 257
R + P++ T+N IS +C +L + +K ++E SC+
Sbjct: 433 HRTGISPNLTTFNTLISAACDHSLAENALKLLVQMEEQSCNP 474
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 4/180 (2%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLS 153
+++EL ++ + A + + M +H V +T ID ++K I + R F+ +
Sbjct: 378 LIRELLQTGKIPQASSVYKTMTSHG-CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEAR 436
Query: 154 --AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 211
A Y+AL+H A+ + A E+ ++K++ + + + YN ++ G VE
Sbjct: 437 GLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAA 496
Query: 212 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
+E+ PD++TYN+ IS N D D+MS S S + V Y L++
Sbjct: 497 RAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMS-SSRCSANVVTYGALIS 555
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 82/180 (45%), Gaps = 3/180 (1%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLS 153
+++EL ++ + A + + M +H V +T ID ++K I + R F+ +
Sbjct: 97 LIRELLQTGKIPQASSVYKTMTSHG-CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEAR 155
Query: 154 --AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 211
A Y+AL+H A+ + A E+ ++K++ + + + YN ++ G VE
Sbjct: 156 GLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAA 215
Query: 212 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
+E+ PD++TYN+ IS N D L + + +G + D Y +V+
Sbjct: 216 RAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVD 275
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 102/252 (40%), Gaps = 17/252 (6%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYTA++ A K E+A L E++ + + YN ++ +G++E+ ++ +I
Sbjct: 269 TYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKI 328
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
PD+ TY I + K EM+ G + D V Y L+ +
Sbjct: 329 VDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMAL-RGLALDTVCYTALIRELLQTGK 387
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ A S K++T + ++ L + K +I ++R+ K M +R
Sbjct: 388 IPQASS-----VYKTMTSHGCVPD--VVTLSTMIDGLSKAGRIGAAVRIFKS-MEARGLA 439
Query: 339 C--ILSSYLMLGHLKE-----VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 391
++ S L+ G K E++ Q K++ + I+ N L+ G E A
Sbjct: 440 PNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY-NILIDGLCKSGDVEAARA 498
Query: 392 FHMLLLQKNCAP 403
F +L+ C P
Sbjct: 499 FFDEMLEAGCKP 510
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 64/148 (43%), Gaps = 2/148 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT+L+ K + +A +LF+ + L+ + + Y ++ + G++ + + V + +
Sbjct: 58 TYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTM 117
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
VPD+ T + I + I + M G + + V Y L++ A
Sbjct: 118 TSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSME-ARGLAPNEVVYSALIHGLCKARK 176
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLI 306
+ + L + +K+ ITY+ LI
Sbjct: 177 M-DCALEMLAQMKKAFCTPDTITYNVLI 203
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 76/362 (20%), Positives = 135/362 (37%), Gaps = 47/362 (12%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
A + + V +G ++ L K+ + A EI M K Y T I
Sbjct: 579 ACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEM-RGKGIAPDVFSYGTLI 637
Query: 132 DLMTKVFGIHSGERYFEGLPLSAKTSET--YTALLHLYAGAKWTEKAEELFERVKQSNLS 189
D +K+ + F+ + + TS Y LL + + EKA+EL + +
Sbjct: 638 DGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFP 697
Query: 190 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCA----------- 238
NA+ Y ++ Y G + + + +E+K K +VPD F Y + C
Sbjct: 698 PNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 757
Query: 239 ---------------------------ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
L D + + +D S D G + V Y N++
Sbjct: 758 FETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDG-SFDKFGKPNDVTY-NIMI 815
Query: 272 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 331
Y+ + A +K+ ITY L+ Y +G + ++ ++ + +
Sbjct: 816 DYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIE 875
Query: 332 MTSRNYICILSSYLMLGHLKEVGEIIDQ-WKQSATSD---FDISACNRLLGAFSDVGLTE 387
+ Y I++++L G + ++DQ + ++A D IS C LL F+ VG E
Sbjct: 876 PDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEME 935
Query: 388 KA 389
A
Sbjct: 936 VA 937
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/321 (19%), Positives = 125/321 (38%), Gaps = 10/321 (3%)
Query: 74 NVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDL 133
+I V+ G +A S + +E + Y+ +EI + + V+S Y T +
Sbjct: 375 GMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKK-----RNIVISPYTYGTAVKG 429
Query: 134 MTKVFGIHSGERYFEGLPLSAKTSET--YTALLHLYAGAKWTEKAEELFERVKQSNLSFN 191
M + + + S YT L+ + A + + +++ ++ +
Sbjct: 430 MCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPD 489
Query: 192 ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 251
YN ++ ++++ + E+ PD FTY +IS K++
Sbjct: 490 TFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVK 549
Query: 252 EMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAG 311
EM + G + V L+N Y ++ A S+ E+ I TY L+
Sbjct: 550 EM-LECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAK-TYTVLMNGLVK 607
Query: 312 LGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDIS 371
G + ++I+ +R +Y ++ + LG++++ I D+ Q+ + ++
Sbjct: 608 NGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTS-NVI 666
Query: 372 ACNRLLGAFSDVGLTEKANEF 392
N LLG F G EKA E
Sbjct: 667 IYNMLLGGFCRSGEIEKAKEL 687
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/349 (18%), Positives = 135/349 (38%), Gaps = 55/349 (15%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLS 153
++ L K + A + MV+H F + Y I +M+K + + F+G+
Sbjct: 321 LIDGLLKGRNADAANGLVHEMVSHG-FSIDPMMYDYFICVMSKEGAMEKAKALFDGMITF 379
Query: 154 AKT--SETYTALLHLYAGAKWTEKAEELFERVKQSNLSF--------------------- 190
T + Y +L+ + K K EL +K+ N+
Sbjct: 380 GVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGA 439
Query: 191 --------------NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 236
N ++Y ++ ++ + V++E++ + + PD F YN I
Sbjct: 440 YNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIG 499
Query: 237 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 296
+ +D+ + FL EM ++G D Y ++ YI A +A+ E +
Sbjct: 500 LSKAKKMDEARSFLLEM-VENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIP 558
Query: 297 RQWITYDFLIILYAGLGN----KDKIDQIWKSLR-MTKQKM--TSRNYICILSSYLMLGH 349
+ +L GL N K K+ + + R M +Q + ++ Y +++ + G
Sbjct: 559 NK--------VLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGK 610
Query: 350 LKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
+ + EI + + + D+ + L+ FS +G +KA+ ++Q
Sbjct: 611 VNDAEEIFHEMRGKGIAP-DVFSYGTLIDGFSKLGNMQKASSIFDEMVQ 658
>gi|224137224|ref|XP_002322504.1| predicted protein [Populus trichocarpa]
gi|222867134|gb|EEF04265.1| predicted protein [Populus trichocarpa]
Length = 647
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 69/129 (53%), Gaps = 2/129 (1%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVK 184
Y T +D M + +++++ + S + + TY ALL Y A++ E ++++ +K
Sbjct: 266 YNTLLDAMGRARRPWQAKKFYQDIIDSGLSPSYATYAALLRAYGRARYGEDTIKIYKEMK 325
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
+ LS N L+YN ++ + +G V++ + E++K + PD +T++ I+ + +
Sbjct: 326 EKELSLNVLLYNTILAMCADLGFVDEAIEIFEDMKNSGISPDSWTFSSMITMSSCCGKVS 385
Query: 245 QVKKFLDEM 253
+ + L+EM
Sbjct: 386 EAENMLNEM 394
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 83/187 (44%), Gaps = 12/187 (6%)
Query: 146 YFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM 203
+FE +P + T++ ++ Y EKA L++R + + ++ ++ +Y
Sbjct: 180 WFEKMPSFGLDPDDVTFSTMIDSYGRVGNVEKALSLYDRARTEKWRLDTTTFSTLIRIYK 239
Query: 204 SVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW 263
G + V EE+K V P++ YN + + Q KKF ++ DSG S +
Sbjct: 240 DSGNFDCCLNVYEEMKALGVKPNLVIYNTLLDAMGRARRPWQAKKFYQDI-IDSGLSPSY 298
Query: 264 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKID 319
Y L+ Y A + ++ K + +++ + Y+ ++ + A LG D+
Sbjct: 299 ATYAALLRAYGRARY-----GEDTIKIYKEMKEKELSLNVLLYNTILAMCADLGFVDEAI 353
Query: 320 QIWKSLR 326
+I++ ++
Sbjct: 354 EIFEDMK 360
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 45/94 (47%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y +L + A + ++A E+FE +K S +S ++ ++ M+T+ G+V + ++ E+
Sbjct: 336 YNTILAMCADLGFVDEAIEIFEDMKNSGISPDSWTFSSMITMSSCCGKVSEAENMLNEMF 395
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
P+IF I ID V K + +
Sbjct: 396 EAGFQPNIFVLTSLIQCYGKAQRIDDVVKTFNRL 429
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 145/342 (42%), Gaps = 17/342 (4%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEIS---EWMVTHKEFVLSDSDYA 128
A +V+ + + G + V + ++ + R A+++ E M + V+ Y
Sbjct: 64 ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVI----YN 119
Query: 129 TRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALL-HLYAGAKWTEKAEELFERVKQ 185
T ID K+ ++ F+ + ++ TY +L+ L +W++ A + + V +
Sbjct: 120 TIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR 179
Query: 186 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 245
++ N + + ++ +++ G+ + + EE+ R+ V PD+FTYN I+ +D+
Sbjct: 180 -DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDE 238
Query: 246 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFL 305
K+ LD M G D V Y L+N + S V+ + E + ITY+ +
Sbjct: 239 AKQMLDLMV-TKGCLPDVVTYNTLINGF-CKSKRVDEGTKLFREMAQRGLVGDTITYNTI 296
Query: 306 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 365
I Y G D +I+ + + R Y +L M +++ + + ++S
Sbjct: 297 IQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEI 353
Query: 366 SDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
+ DI+ N ++ +G E A + L K P S
Sbjct: 354 -ELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVS 394
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 133/327 (40%), Gaps = 44/327 (13%)
Query: 98 LRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTS 157
+R+S R A++ +W + Y +D++ K SG + +T
Sbjct: 1 MRRSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVK-----SGHHF--------RTG 47
Query: 158 ETYTALLH------------LYAG---AKWTEKAEELFERVKQSNLSFNALMYNEMMTLY 202
+ Y LLH L G A +A E + + +++ + ++N ++
Sbjct: 48 KVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGL 107
Query: 203 MSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGS-D 261
G ++ + E ++ V P+I TYN IS + N+++ ++ L+EM G S
Sbjct: 108 FKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAP 167
Query: 262 DWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI--ILYAGL---GNKD 316
D V Y L+N + AS + E+ E K+ I D L IL +G+ G+ +
Sbjct: 168 DIVTYNTLINAFYRASRI--REACAFREKMKA----AGINPDVLTCNILVSGICKDGDVE 221
Query: 317 KIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRL 376
+ +I +++ Y I+ + + G + E EI+ S D+ N L
Sbjct: 222 EALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMSCSP----DLVTFNTL 277
Query: 377 LGAFSDVGLTEKANEFHMLLLQKNCAP 403
L F G+ +A E + ++N P
Sbjct: 278 LDGFCKAGMLPRALEVLEEMCRENILP 304
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 105/252 (41%), Gaps = 17/252 (6%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+ LL + A +A E+ E + + N+ + + Y ++ VGQV+ ++EEI
Sbjct: 273 TFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEI 332
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
R+ +PD+ Y + + I++ K + EMS G V Y +LV+ Y A +
Sbjct: 333 VRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSV-RGCRTGVVMYSSLVSGYCRAGN 391
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
V+ L E TY+ + LG K I K++ + + +R Y+
Sbjct: 392 -VHKAREILAEMVSINMVPPLFTYNIV------LGGLIKDGSISKAVSLISD-LVARGYV 443
Query: 339 CILSSYLML-------GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 391
+ +Y L ++E ++ D+ D++ + + G VG + A
Sbjct: 444 PDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFG-LCRVGRVDDAWS 502
Query: 392 FHMLLLQKNCAP 403
+ + +K AP
Sbjct: 503 LVVEMSRKRHAP 514
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 109/260 (41%), Gaps = 22/260 (8%)
Query: 153 SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVA 212
SA TY L++ + A +A E++K + ++ + L N +++ G VE+
Sbjct: 165 SAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEAL 224
Query: 213 LVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 272
+++ +K VPD+ TYN I + + + + L MSC S D V + L++
Sbjct: 225 EILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMSC----SPDLVTFNTLLDG 280
Query: 273 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 332
+ A L A L E + ITY IL GL ++ Q+ + + +++
Sbjct: 281 FCKAGMLPRA-LEVLEEMCRENILPDVITY---TILVNGLC---RVGQVQVAFYLL-EEI 332
Query: 333 TSRNYICILSSYL-MLGHLKEVGEIIDQWKQSATSDFDISAC-------NRLLGAFSDVG 384
+ YI + +Y ++ L + GEI + K + + C + L+ + G
Sbjct: 333 VRQGYIPDVIAYTSLVDGLCKSGEIEEAHK--LVKEMSVRGCRTGVVMYSSLVSGYCRAG 390
Query: 385 LTEKANEFHMLLLQKNCAPT 404
KA E ++ N P
Sbjct: 391 NVHKAREILAEMVSINMVPP 410
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 99/249 (39%), Gaps = 12/249 (4%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDS-DYATRIDLMTKVFGIHSGERYFEGLPL 152
+L K+ ALE+ E M +E +L D Y ++ + +V + E +
Sbjct: 277 LLDGFCKAGMLPRALEVLEEMC--RENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVR 334
Query: 153 SAKTSET--YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 210
+ YT+L+ + E+A +L + + +MY+ +++ Y G V K
Sbjct: 335 QGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHK 394
Query: 211 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 270
++ E+ N+VP +FTYN+ + +I + + ++ G D V Y L+
Sbjct: 395 AREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVA-RGYVPDVVTYNTLI 453
Query: 271 NIYITASHLVNAESSTLVEAEKSITQRQWITYDF-LIILYAGLGNKDKIDQIWKSLRMTK 329
+ A+ + A + + R D L + GL ++D W +
Sbjct: 454 DGLCKANRVREA-----CDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMS 508
Query: 330 QKMTSRNYI 338
+K + N +
Sbjct: 509 RKRHAPNVV 517
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 106/242 (43%), Gaps = 19/242 (7%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY++ + A+ +KAE + ++ + + + YN M+ Y +GQ ++ A + E+
Sbjct: 264 TYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREM 323
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
R+ ++PDIFT N ++SS + +F D M+ G D V Y L++ Y +
Sbjct: 324 TRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAA-KGHKPDLVTYSVLLHGYAAEGY 382
Query: 279 LV------NAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 332
+V N+ + A+ S+ Y+ LI Y G D+ I+ ++
Sbjct: 383 VVDMLNLFNSMEGNGIVADHSV-------YNILIDAYGKRGMMDEAMLIFTQMQERGVMP 435
Query: 333 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDF--DISACNRLLGAFSDVGLTEKAN 390
+ Y +++++ +G L + +D++ Q D N L+ F G KA
Sbjct: 436 DAWTYGTVIAAFSRMGRLADA---MDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAK 492
Query: 391 EF 392
E
Sbjct: 493 EL 494
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 57/117 (48%), Gaps = 3/117 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERV--KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
+Y+ +L +++A +L + K S N + YN ++ + G+V K +
Sbjct: 192 SYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFH 251
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
E+ ++ VVPD+ TY+ +I + +D+ + L +M +G D V Y +++ Y
Sbjct: 252 EMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQM-ISNGFEPDKVTYNCMIHGY 307
>gi|295828270|gb|ADG37804.1| AT1G07590-like protein [Neslia paniculata]
Length = 194
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 3/164 (1%)
Query: 193 LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 252
L+YN ++ + G+ + +A + +K P + TY++ + A NID V K D
Sbjct: 20 LVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEANEHNIDGVLKAFDG 79
Query: 253 MSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL 312
M +G + V Y L + A AE+ T E E+SIT W T D L+ILY+ L
Sbjct: 80 MK-KAGVEPNEVSYCILAMAHAIARLYTVAEAYT-EEIERSITGDNWSTLDILMILYSRL 137
Query: 313 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 356
G + ++ + W +R + S++Y+ ++ +G+L E+
Sbjct: 138 GKEKELVRTWNVIR-GFHHVRSKSYLLATEAFARVGNLDRAEEL 180
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 113/262 (43%), Gaps = 12/262 (4%)
Query: 148 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 207
E P ++ + ALL GAK + AE+ F + +S + +N +++ +GQ
Sbjct: 147 ESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQ 206
Query: 208 VEKVALVVEEIKRKNVVPDIFTYNLWISS-C--AATLNIDQVKKFLDEMSCDSGGSDDWV 264
+ K V ++IK + P + TYN I C N+ V L EM ++G S V
Sbjct: 207 LRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEM-VEAGISPTAV 265
Query: 265 KYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS 324
+ L+N Y S+ A E ++ +TY+ LI +GL ++ K+++ K
Sbjct: 266 TFGVLINGYCKNSN-TAAAVRVFEEMKQQGIAASVVTYNSLI---SGLCSEGKVEEGVKL 321
Query: 325 LRMTKQKMTSRNYI---CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFS 381
+ + S N I C+L + G + + + ID + + D+ N L+ +
Sbjct: 322 MEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTER-NVEPDVVIYNILIDVYR 380
Query: 382 DVGLTEKANEFHMLLLQKNCAP 403
+G E A + +K +P
Sbjct: 381 RLGKMEDAMAVKEAMAKKGISP 402
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 76/167 (45%), Gaps = 4/167 (2%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y L+ +Y E A + E + + +S N YN ++T + G + +++E+K
Sbjct: 372 YNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMK 431
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
K + D+ TYN+ I + + + K LDEMS + G + + Y ++ + ++
Sbjct: 432 EKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMS-EVGLEPNHLTYNTIIQGFCDKGNI 490
Query: 280 VNA-ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 325
+A E T EK + +TY+ I + +G D+ + + +
Sbjct: 491 KSAYEIRT--RMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEM 535
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/201 (18%), Positives = 87/201 (43%), Gaps = 2/201 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+ +L + A + + + + N+ + ++YN ++ +Y +G++E V E +
Sbjct: 336 TFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAM 395
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+K + P++ TYN I+ + + + LDEM + G D V Y L+
Sbjct: 396 AKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMK-EKGIEADVVTYNVLIGALCCKGE 454
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ A L E + + +TY+ +I + GN +I + +++ Y
Sbjct: 455 VRKA-VKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYN 513
Query: 339 CILSSYLMLGHLKEVGEIIDQ 359
+ + +G + E +++++
Sbjct: 514 VFIKYFCQIGKMDEANDLLNE 534
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/330 (18%), Positives = 143/330 (43%), Gaps = 16/330 (4%)
Query: 81 SEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVF-- 138
+G + V I+ L K+ +Y A + + M+ + D AT L+ +
Sbjct: 421 GKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLK----IGMSPDTATYNILLVECCRN 476
Query: 139 -GIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 195
+ ER F+ +P + +++AL+ L + ++A + F +K + L+ + ++Y
Sbjct: 477 DNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIY 536
Query: 196 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 255
++ + G + + V +E+ + D+ TYN ++ + + + EM+
Sbjct: 537 TILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMT- 595
Query: 256 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 315
+ G D+ + L+N Y ++ A + + ++++ + +TY+ LI +
Sbjct: 596 ERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNL-KPDVVTYNTLIDGFCKGSEM 654
Query: 316 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD--ISAC 373
+K++++W + + +Y +++ Y +G + E + W + F+ I C
Sbjct: 655 EKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRL---WDEMVEKGFEATIITC 711
Query: 374 NRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
N ++ + G KA+EF +L K P
Sbjct: 712 NTIVKGYCRAGNAVKADEFLSNMLLKGIVP 741
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 1/114 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L++ Y E+A EL + + L YN ++ G+ + V++E+
Sbjct: 395 TYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEM 454
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 272
+ + PD TYN+ + C N+ ++ DEM G D V + L+ +
Sbjct: 455 LKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMP-SQGVVPDLVSFSALIGL 507
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/245 (18%), Positives = 102/245 (41%), Gaps = 3/245 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +L+ K +A+ELF + + + + + ++ Y G + K + E +
Sbjct: 570 TYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMM 629
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
++N+ PD+ TYN I +++V + ++M + + Y L+N Y
Sbjct: 630 IQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDM-ISRRIYPNHISYGILINGYCNMGC 688
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ A EK + IT + ++ Y GN K D+ ++ + Y
Sbjct: 689 VSEAFRLWDEMVEKGF-EATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYN 747
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
+++ ++ ++ ++++ + S D+ N +L FS G ++A + +++
Sbjct: 748 TLINGFIKEENMDRAFALVNKMENSGLLP-DVITYNVILNGFSRQGRMQEAELIMLKMIE 806
Query: 399 KNCAP 403
+ P
Sbjct: 807 RGVNP 811
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 1/115 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+ L+ Y A+ + E F +K L + N ++ + VG V+ + +E+
Sbjct: 290 VFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEV 349
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
R V +++T N+ I++ I+ K FL +M + G D V Y L+N Y
Sbjct: 350 VRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDME-EKGVFPDVVTYNTLINAY 403
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 44/93 (47%)
Query: 162 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 221
+LL W + A E+++ V +S + N N M+ ++E + +++ K
Sbjct: 328 SLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEK 387
Query: 222 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 254
V PD+ TYN I++ +++ + +D MS
Sbjct: 388 GVFPDVVTYNTLINAYCRQGLLEEAFELMDSMS 420
>gi|449468059|ref|XP_004151739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 225
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
E+Y L+ A E A ELFE++ Q L + + YN M+ + VGQV+K ++ E+
Sbjct: 87 ESYNCLIDGLCKAGKLETAWELFEKLYQEGLQSDVVTYNIMIHGFCKVGQVDKANILFEK 146
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
++ PDI TYN + + D+V K L +M
Sbjct: 147 MEENGCTPDIITYNTLLCGFCQSNKSDEVVKLLHKM 182
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 55/110 (50%), Gaps = 2/110 (1%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 184
Y ID + K + + FE L S+ TY ++H + +KA LFE+++
Sbjct: 89 YNCLIDGLCKAGKLETAWELFEKLYQEGLQSDVVTYNIMIHGFCKVGQVDKANILFEKME 148
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 234
++ + + + YN ++ + + ++V ++ ++ ++++ PD + N+ I
Sbjct: 149 ENGCTPDIITYNTLLCGFCQSNKSDEVVKLLHKMIQRDMSPDAISCNIVI 198
>gi|297737146|emb|CBI26347.3| unnamed protein product [Vitis vinifera]
Length = 862
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 109/247 (44%), Gaps = 4/247 (1%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
+SE Y+A + Y +AE+ F K+S + L +N M+ Y + EK ++
Sbjct: 479 SSECYSANIDAYGERGHILEAEKAFLCCKESR-KLSVLEFNVMIKAYGISNRYEKACQLI 537
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275
+ ++ V+PD F+YN I A+ + K +L +M ++ D + Y +++ +I
Sbjct: 538 DSMENHGVLPDKFSYNSLIQILASADLPHKAKFYLMKMQ-ETQLVSDCIPYCAVISSFIK 596
Query: 276 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
L AE E Q + Y LI +A +GN + +LR M +
Sbjct: 597 LGQLEMAE-GLFKEMIGYNVQPDVVVYGILINAFADVGNVREAVNYVNALRNAGLPMNAV 655
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 395
Y ++ Y +G+L+E E + S D+ + N ++ +S+ + ++A E
Sbjct: 656 IYNSLIKLYTKVGYLEEAQEAYKMLQASEVGP-DVYSSNCMIDLYSERSMVKQAEEIFES 714
Query: 396 LLQKNCA 402
L +K A
Sbjct: 715 LKRKGDA 721
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 115/224 (51%), Gaps = 6/224 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y +L+ + A A KA+ +++++ L + + Y +++ ++ +GQ+E + +E+
Sbjct: 551 SYNSLIQILASADLPHKAKFYLMKMQETQLVSDCIPYCAVISSFIKLGQLEMAEGLFKEM 610
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
NV PD+ Y + I++ A N+ + +++ + ++G + V Y +L+ +Y +
Sbjct: 611 IGYNVQPDVVVYGILINAFADVGNVREAVNYVNALR-NAGLPMNAVIYNSLIKLYTKVGY 669
Query: 279 LVNA-ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
L A E+ +++A S + + +I LY+ + ++I++SL+ K ++
Sbjct: 670 LEEAQEAYKMLQA--SEVGPDVYSSNCMIDLYSERSMVKQAEEIFESLK-RKGDANEFSF 726
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFS 381
+L Y +G LKE +I+ + ++ D+ + N +LG ++
Sbjct: 727 AMMLCMYKRIGKLKEAFQIVQKMRELGLVT-DLLSYNNVLGFYA 769
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 3/202 (1%)
Query: 151 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 210
P +S TY L+ Y A +A + F + + + N + +N M+ + + GQ+E+
Sbjct: 300 PHVCLSSYTYNTLIDTYGKAGQLREASDTFAWMLREGIIPNTVTFNTMIHICGNHGQLEE 359
Query: 211 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 270
A ++++++ PD TYN+ IS A NID+ + +M ++ D V Y L+
Sbjct: 360 AASLMQKMEELRCPPDTRTYNILISLHAKHNNIDRAASYFKKMK-EARLEPDLVSYRTLL 418
Query: 271 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 330
+ + HLV + E ++ + T L +Y G K +W +
Sbjct: 419 YAF-SIRHLVGEAEILVSEMDERGLEIDEFTQSALTRMYIEAGMLKK-SWLWFRRFHLEG 476
Query: 331 KMTSRNYICILSSYLMLGHLKE 352
M+S Y + +Y GH+ E
Sbjct: 477 NMSSECYSANIDAYGERGHILE 498
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 124/293 (42%), Gaps = 21/293 (7%)
Query: 98 LRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKT- 156
L++ ++ ALEI EW+ + L+ Y + ++ K H E ++ + T
Sbjct: 170 LKEQSCWERALEIFEWLKKKGCYELNVIHYNIMLRILGKARKWHHVESLWDEMMSRGITP 229
Query: 157 -SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV- 214
+ TY L+ +Y+ TE+A +R+ + + + + ++ Y G+ +K
Sbjct: 230 VNSTYGTLIDVYSKGGLTEEALHWLDRMNKQGMEPDEVTMGVVVQTYKKAGEFKKAEQFF 289
Query: 215 ----VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 270
+E + +V +TYN I + + + M G + V + +
Sbjct: 290 KNWSLESASQPHVCLSSYTYNTLIDTYGKAGQLREASDTFAWM-LREGIIPNTVTFNTM- 347
Query: 271 NIYITASHLVNAESSTLVEA-EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
I+I +H E+++L++ E+ TY+ LI L+A N D+ +K ++ +
Sbjct: 348 -IHICGNHGQLEEAASLMQKMEELRCPPDTRTYNILISLHAKHNNIDRAASYFKKMKEAR 406
Query: 330 QKMTSRNYICILSSY----------LMLGHLKEVGEIIDQWKQSATSDFDISA 372
+ +Y +L ++ +++ + E G ID++ QSA + I A
Sbjct: 407 LEPDLVSYRTLLYAFSIRHLVGEAEILVSEMDERGLEIDEFTQSALTRMYIEA 459
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 32/167 (19%), Positives = 74/167 (44%), Gaps = 8/167 (4%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLS 153
+L+ L K++++ H + + M++ + +S Y T ID+ +K + + +
Sbjct: 202 MLRILGKARKWHHVESLWDEMMS-RGITPVNSTYGTLIDVYSKGGLTEEALHWLDRMNKQ 260
Query: 154 AKTSE--TYTALLHLYAGAKWTEKAEELF-----ERVKQSNLSFNALMYNEMMTLYMSVG 206
+ T ++ Y A +KAE+ F E Q ++ ++ YN ++ Y G
Sbjct: 261 GMEPDEVTMGVVVQTYKKAGEFKKAEQFFKNWSLESASQPHVCLSSYTYNTLIDTYGKAG 320
Query: 207 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
Q+ + + + R+ ++P+ T+N I C +++ + +M
Sbjct: 321 QLREASDTFAWMLREGIIPNTVTFNTMIHICGNHGQLEEAASLMQKM 367
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 110/274 (40%), Gaps = 6/274 (2%)
Query: 103 RYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSET--- 159
R + ALE+ M YAT I K+ + + F+ + + + +
Sbjct: 162 RVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVM 221
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y AL+ Y + A + E + Q ++ YN ++ G+ V+EE++
Sbjct: 222 YNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQ 281
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
R + PD+FTYN+ I+ N + + +EMS G V Y +L+ + +
Sbjct: 282 RNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMS-RKGVRATAVTYTSLIYAFSRKGQV 340
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 339
+ V +K I + + Y+ LI + G+ ++ +I + + Y
Sbjct: 341 QETDRLFKVAVKKGI-RPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNT 399
Query: 340 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 373
++ + +LG L E +ID+ + D+ C
Sbjct: 400 LIRGFCLLGRLDEARGLIDEMTKRGIQP-DLGLC 432
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 60/117 (51%), Gaps = 10/117 (8%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
T+ TYT+L++ ++ ++ + LF+ + + + +MYN ++ + + G +E+ ++
Sbjct: 323 TAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIM 382
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS----------CDSGGSDD 262
E+++K + PD TYN I +D+ + +DEM+ C +G DD
Sbjct: 383 AEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPDLGLCKNGQGDD 439
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 115/293 (39%), Gaps = 43/293 (14%)
Query: 150 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 209
LPL T L HL A K +A EL ++ + N A+ YN ++ + + G+V+
Sbjct: 112 LPLCTTTFNIM--LRHLCATGKPV-RALELLRQMPRPN----AVTYNTVIAGFCARGRVQ 164
Query: 210 KVALVVEEIK-RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM--------------- 253
V+ E++ R + PD +TY IS ++ K DEM
Sbjct: 165 AALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNA 224
Query: 254 ----SCDSGGSDDWVKY------------VNLVNIYITASHLVNAES---STLVEAEKSI 294
CD G D ++Y V N+ + A + S + L E +++
Sbjct: 225 LIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNG 284
Query: 295 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 354
TY+ LI Y GN+ K ++++ + + T+ Y ++ ++ G ++E
Sbjct: 285 LSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETD 344
Query: 355 EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
+ + D+ N L+ + G E+A E + +K P + +
Sbjct: 345 RLFKVAVKKGIRP-DVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVT 396
>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 119/292 (40%), Gaps = 22/292 (7%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLS 153
+++E RK++R K A ++S +++L VF E Y
Sbjct: 177 LVREGRKNERGKLA-----------SAMISTLGRLGKVELAKGVFETALSEGY------- 218
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG-QVEKVA 212
T ++AL+ Y + + ++A ++FE +K S L N + YN ++ G + ++V
Sbjct: 219 GNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVV 278
Query: 213 LVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 272
+ EE+ R V PD TYN ++ C+ + + +EM D G D Y L++
Sbjct: 279 EIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEM-IDRGIDQDVFTYNTLLDA 337
Query: 273 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 332
+ A L K I +TY + YA G + ++ ++ +
Sbjct: 338 VCKGGQMDLAYEIMLEMPGKKILP-NVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGL 396
Query: 333 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 384
+Y +LS Y LG ++ ++ + S D+ N LL + G
Sbjct: 397 DRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKK-DVVTYNALLDGYGKQG 447
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 97/231 (41%), Gaps = 3/231 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +LL + + E A LF + + + YN ++ GQ++ ++ E+
Sbjct: 295 TYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEM 354
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K ++P++ TY+ A ++ +EM G D V Y L++IY
Sbjct: 355 PGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDR-VSYNTLLSIYAKLGR 413
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+A E S ++ +TY+ L+ Y G +++ +++K ++ + Y
Sbjct: 414 FEDA-LKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYS 472
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
++ Y +E E+ ++KQ+ D+ + L+ A GL + A
Sbjct: 473 TLIDVYSKGSLYEEAMEVFREFKQAGLKA-DVVLYSELINALCKNGLVDSA 522
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 130 RIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLS 189
+ + +T+VF +R F L TY+ L+ +Y+ E+A E+F KQ+ L
Sbjct: 448 KFNEVTRVFKEMKKDRVFPNL-------LTYSTLIDVYSKGSLYEEAMEVFREFKQAGLK 500
Query: 190 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYN 231
+ ++Y+E++ G V+ L+++E+ ++ + P++ TYN
Sbjct: 501 ADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYN 542
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 67/152 (44%), Gaps = 12/152 (7%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY ALL Y + +F+ +K+ + N L Y+ ++ +Y E+ V E
Sbjct: 435 TYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREF 494
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY---IT 275
K+ + D+ Y+ I++ +D LDEM+ G + V Y ++++ + T
Sbjct: 495 KQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMT-KEGIRPNVVTYNSIIDAFGRSTT 553
Query: 276 ASHLVNAESSTLVEAEKSITQRQWITYDFLII 307
A LV+ ++ +RQ + F++I
Sbjct: 554 AEFLVDGVGAS--------NERQSESPTFMLI 577
>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 119/292 (40%), Gaps = 22/292 (7%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLS 153
+++E RK++R K A ++S +++L VF E Y
Sbjct: 177 LVREGRKNERGKLA-----------SAMISTLGRLGKVELAKGVFETALSEGY------- 218
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG-QVEKVA 212
T ++AL+ Y + + ++A ++FE +K S L N + YN ++ G + ++V
Sbjct: 219 GNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVV 278
Query: 213 LVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 272
+ EE+ R V PD TYN ++ C+ + + +EM D G D Y L++
Sbjct: 279 EIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEM-IDRGIDQDVFTYNTLLDA 337
Query: 273 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 332
+ A L K I +TY + YA G + ++ ++ +
Sbjct: 338 VCKGGQMDLAYEIMLEMPGKKILP-NVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGL 396
Query: 333 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 384
+Y +LS Y LG ++ ++ + S D+ N LL + G
Sbjct: 397 DRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKK-DVVTYNALLDGYGKQG 447
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 97/231 (41%), Gaps = 3/231 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +LL + + E A LF + + + YN ++ GQ++ ++ E+
Sbjct: 295 TYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEM 354
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K ++P++ TY+ A ++ +EM G D V Y L++IY
Sbjct: 355 PGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDR-VSYNTLLSIYAKLGR 413
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+A E S ++ +TY+ L+ Y G +++ +++K ++ + Y
Sbjct: 414 FEDA-LKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYS 472
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
++ Y +E E+ ++KQ+ D+ + L+ A GL + A
Sbjct: 473 TLIDVYSKGSLYEEAMEVFREFKQAGLKA-DVVLYSELINALCKNGLVDSA 522
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 130 RIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLS 189
+ + +T+VF +R F L TY+ L+ +Y+ E+A E+F KQ+ L
Sbjct: 448 KFNEVTRVFKEMKKDRVFPNL-------LTYSTLIDVYSKGSLYEEAMEVFREFKQAGLK 500
Query: 190 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYN 231
+ ++Y+E++ G V+ L+++E+ ++ + P++ TYN
Sbjct: 501 ADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYN 542
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 67/152 (44%), Gaps = 12/152 (7%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY ALL Y + +F+ +K+ + N L Y+ ++ +Y E+ V E
Sbjct: 435 TYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREF 494
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY---IT 275
K+ + D+ Y+ I++ +D LDEM+ G + V Y ++++ + T
Sbjct: 495 KQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMT-KEGIRPNVVTYNSIIDAFGRSTT 553
Query: 276 ASHLVNAESSTLVEAEKSITQRQWITYDFLII 307
A LV+ ++ +RQ + F++I
Sbjct: 554 AEFLVDGVGAS--------NERQSESPSFMLI 577
>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
Length = 1091
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/248 (19%), Positives = 108/248 (43%), Gaps = 9/248 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L++ + + +A E+++ + + +S + Y+ +M + V+ V ++ E+
Sbjct: 173 TYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEM 232
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + V P++++Y + I D+ L +M DSG D V + ++ + A
Sbjct: 233 EARGVKPNVYSYTICIRVLGQAARFDEAYHILGKME-DSGCKPDVVTHTVIIQVLCDAGR 291
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L +A+ + + + S + +TY L+ G+ + ++W ++ +Y
Sbjct: 292 LSDAK-AVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYT 350
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF--HMLL 396
++ + +G + E + D+ K+ S S N L+ F + ++A E HM
Sbjct: 351 AVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSY-NSLISGFLKADMFDRALELFNHM-- 407
Query: 397 LQKNCAPT 404
C P+
Sbjct: 408 --NACGPS 413
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 74/364 (20%), Positives = 138/364 (37%), Gaps = 56/364 (15%)
Query: 52 SDGKDDLKSRIFRISLPKRSA-----TNVIQRW---VSEGNQATVSELRHILKELRKSQR 103
SD K D R+ I+L + +V++ W V++G + ++ L + R
Sbjct: 305 SDQKPD---RVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGR 361
Query: 104 YKHALEISEWMVTHKEFVLSDSDYA--TRIDLMTKVFGIHSGERYFEGLPLSAKTSETYT 161
AL + + M KE +S Y+ + I K F + + YT
Sbjct: 362 VDEALAVFDEM---KEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYT 418
Query: 162 ALLHL--YAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
+L + Y + + KA + +E +K + + N ++ G++ V E+K
Sbjct: 419 HVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELK 478
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
V PD TY + I C+ D+ F +M +SG D + +L++
Sbjct: 479 AMGVSPDTITYTMMIKCCSKASKADEAMNFFSDM-VESGCVPDVLALNSLID-------- 529
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 339
LY G G ++ Q++ L+ K + T+ Y
Sbjct: 530 ---------------------------TLYKG-GKGNEAWQLFHKLKEMKIEPTNGTYNT 561
Query: 340 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 399
+LS G +KEV +++++ ++ ++ N +L S G A + + +K
Sbjct: 562 LLSGLGREGKVKEVMQLLEEMTRTIYPP-NLITYNTVLDCLSKNGEVNCAIDMLYSMTEK 620
Query: 400 NCAP 403
CAP
Sbjct: 621 GCAP 624
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 96/209 (45%), Gaps = 9/209 (4%)
Query: 147 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 206
F+GL +S KT +Y +L+ + AE+LF +K+ + YN ++
Sbjct: 757 FKGLGVSLKTG-SYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSM 815
Query: 207 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ-VKKFLDEMSCDSGGSDDWVK 265
+VE++ V +E+ RK TYN IS + ++Q + + + MS G S
Sbjct: 816 RVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMS--EGFSPTPCT 873
Query: 266 YVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 325
Y L++ + + +V+AE + E + + Y+ L+ + GN + + Q+++
Sbjct: 874 YGPLLDGLLKSGKMVDAE-NLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFE-- 930
Query: 326 RMTKQKMTS--RNYICILSSYLMLGHLKE 352
+M +Q + ++Y ++ + G L +
Sbjct: 931 KMVEQGINPDIKSYTILIDTLCTAGRLND 959
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 77/174 (44%), Gaps = 3/174 (1%)
Query: 82 EGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIH 141
+G ++T I+ L KS+R + A+++ + + + F + Y +D + K +
Sbjct: 830 KGYESTYVTYNTIISGLVKSKRLEQAIDLY-YNLMSEGFSPTPCTYGPLLDGLLKSGKMV 888
Query: 142 SGERYF-EGLPLSAKTSET-YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMM 199
E F E L + + T Y LL+ + A TE +LFE++ + ++ + Y ++
Sbjct: 889 DAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILI 948
Query: 200 TLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
+ G++ ++ + PD+ YNL I + I++ +EM
Sbjct: 949 DTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEM 1002
>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 477
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 115/287 (40%), Gaps = 5/287 (1%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
A +V + G L ++K L K AL + +V + F L Y T I
Sbjct: 147 AFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVA-QGFQLDQVSYGTLI 205
Query: 132 DLMTKVFGIHSGERYFEGLPLSAKTSET--YTALLHLYAGAKWTEKAEELFERVKQSNLS 189
+ + K + R L + + YT ++H K A +L+ + +S
Sbjct: 206 NGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGIS 265
Query: 190 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 249
N YN ++ + +G +++ ++ E+K KN+ PD++T+N+ I + ID+
Sbjct: 266 PNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISL 325
Query: 250 LDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILY 309
+EM + V Y +L++ HL A + E+ I Q +Y L+
Sbjct: 326 FEEMK-HKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGI-QPDVYSYTILLDAL 383
Query: 310 AGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 356
G + Q ++ L + + R Y +++ G +V ++
Sbjct: 384 CKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDL 430
>gi|255578090|ref|XP_002529915.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530592|gb|EEF32469.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 636
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 111/251 (44%), Gaps = 7/251 (2%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
S Y L+ + K EKA ELF+ + + Y +++ Y G ++K ++E
Sbjct: 155 SGMYIKLIVMLGKCKQPEKAHELFQAMIHEGCDVSHESYTALLSAYGRSGLLDKAFSLLE 214
Query: 217 EIKR-KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275
E+KR + PD+ TY++ I SC D+ K L M G S + + Y L++ Y
Sbjct: 215 EMKRNPDCQPDVHTYSILIKSCVQVFAFDKAKTLLSNME-SLGISPNTITYNTLIDAYGK 273
Query: 276 ASHLVNAESSTLVE--AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
A E +TLV+ ++++ W T + + + G + +++ ++ + + +
Sbjct: 274 AKMFEEME-ATLVKMLSQQNCEPDVW-TMNSTLRAFGISGQIETMEKCYEKFQGAGIEPS 331
Query: 334 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 393
+ +L SY G K++ ++ ++ Q + I N ++ AF G ++
Sbjct: 332 IMTFNVLLDSYGKAGDYKKMSAVM-EYMQKYHYSWTIITYNIVIDAFGRAGDLKQMEYLF 390
Query: 394 MLLLQKNCAPT 404
L+ + P+
Sbjct: 391 RLMRSERIKPS 401
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 63/329 (19%), Positives = 129/329 (39%), Gaps = 10/329 (3%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
A + Q + EG + +L +S A + E M + + Y+ I
Sbjct: 174 AHELFQAMIHEGCDVSHESYTALLSAYGRSGLLDKAFSLLEEMKRNPDCQPDVHTYSILI 233
Query: 132 DLMTKVFGIHSGERYF---EGLPLSAKTSETYTALLHLYAGAKWTEKAEE-LFERVKQSN 187
+VF + E L +S T TY L+ Y AK E+ E L + + Q N
Sbjct: 234 KSCVQVFAFDKAKTLLSNMESLGISPNTI-TYNTLIDAYGKAKMFEEMEATLVKMLSQQN 292
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 247
+ N + + GQ+E + E+ + + P I T+N+ + S + ++
Sbjct: 293 CEPDVWTMNSTLRAFGISGQIETMEKCYEKFQGAGIEPSIMTFNVLLDSYGKAGDYKKMS 352
Query: 248 KFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES-STLVEAEKSITQRQWITYDFLI 306
++ M S + Y +++ + A L E L+ +E+ + +T L+
Sbjct: 353 AVMEYMQ-KYHYSWTIITYNIVIDAFGRAGDLKQMEYLFRLMRSER--IKPSCVTLCSLV 409
Query: 307 ILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATS 366
Y +KI+ + + + + + + + C++ +Y +G E+ ++ +Q
Sbjct: 410 RAYGQAEKPEKIEGVLRFIENSDITLDTVFFNCLVDAYGRMGCFAEMKGVLILMEQKGYR 469
Query: 367 DFDISACNRLLGAFSDVGLTEKANEFHML 395
I+ ++ A+S G+T+ E L
Sbjct: 470 PDKITY-RTMIKAYSSKGMTKHVKELQDL 497
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 134/323 (41%), Gaps = 19/323 (5%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDS-DYATRIDLMTKVFGIHSGERYFEGLPL 152
++ L ++ R A+++ E M ++ V DS Y ID + K ++ F+ L
Sbjct: 294 VILGLCQNDRIDEAVQMFEKM--NERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLH 351
Query: 153 SAKTSET--YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 210
S T T YT+L+H A + A ELF + + + + YN M+ G +E+
Sbjct: 352 SGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEE 411
Query: 211 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 270
+++++ VPD+ TYN + + +++ +EM G + + + ++
Sbjct: 412 ACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEME-RLGCTPNRRSHNTII 470
Query: 271 NIYITASHLVNA-ESSTLVEAEKSITQ-------RQWITYDFLIILYAGLGNKDKIDQIW 322
S + A + L EA + + + +TY LI + D +
Sbjct: 471 LGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLL 530
Query: 323 KSL--RMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAF 380
+ + R K + ++N ++ G +KE E++D S S D+ N L+
Sbjct: 531 EDMVKRQCKPTVVTQNT--LIHGLCKAGRIKEAREVLDAMVSSGQSP-DVVTYNTLVHGH 587
Query: 381 SDVGLTEKANEFHMLLLQKNCAP 403
G TE+A E ++ + AP
Sbjct: 588 CRAGQTERARELLSDMVARGLAP 610
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 76/186 (40%), Gaps = 20/186 (10%)
Query: 86 ATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGER 145
A V + RH+L+++ K Q +VT T I + K I
Sbjct: 521 ARVDDARHLLEDMVKRQ-------CKPTVVTQN----------TLIHGLCKAGRIKEARE 563
Query: 146 YFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM 203
+ + S ++ + TY L+H + A TE+A EL + L+ N + Y +++
Sbjct: 564 VLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLC 623
Query: 204 SVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW 263
++ + V ++K P++FTY I + +D K EM C +G S D
Sbjct: 624 KANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVC-AGISPDH 682
Query: 264 VKYVNL 269
V Y L
Sbjct: 683 VVYGTL 688
>gi|224104097|ref|XP_002313317.1| predicted protein [Populus trichocarpa]
gi|222849725|gb|EEE87272.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 131/315 (41%), Gaps = 25/315 (7%)
Query: 92 RHILKELRKSQRYKHALEISEWMVTHKEF----------VLSDSDYATRIDLMTKVFGIH 141
R KEL + R + A++ E K++ L D+ + + K+F +
Sbjct: 46 RQSKKELSRILRTEAAIKAIEQKANSKKYNNLWPKAVLEALDDAIKENQWESALKIFELL 105
Query: 142 SGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTL 201
+ ++E ++TYT LL + + E+ LFE + L +Y +++
Sbjct: 106 RKQHWYE------PRTKTYTKLLMMLGKCRQPEEGSFLFEVMLSDGLKPTIDVYTALVSA 159
Query: 202 YMSVGQVEKVALVVEEIKR-KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGS 260
Y GQ++K +V E+K PD++TY++ I+ C + ++ L EMS G
Sbjct: 160 YGKSGQLDKAFSIVVEMKAISECKPDVYTYSILINCCIKLHRFELIRGILAEMSY-LGIE 218
Query: 261 DDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQ 320
V Y +++ Y A E++ E + T++ +I Y G DK+++
Sbjct: 219 CSTVTYNTIIDGYGKAKMFEEMENTLTDMIESGSSVPDLFTFNSIIGAYGSKGRIDKMEK 278
Query: 321 IWKSLRMTKQKMTSRNYICILSSY---LMLGHLKEVGEIIDQWKQSATSDFDISACNRLL 377
+ ++ + + + ++ SY M G ++ V E +++ S + I N +
Sbjct: 279 WYTEFQLMGLRQDIKTFNILIRSYGKAGMYGKMRSVLEFMEKRFFSPS----IVTHNIFI 334
Query: 378 GAFSDVGLTEKANEF 392
F G E E+
Sbjct: 335 ETFGKAGDIETMEEY 349
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 95/214 (44%), Gaps = 4/214 (1%)
Query: 191 NALMYNEMMTLYMSVGQVEKVA-LVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 249
+ + YN ++ Y E++ + + I+ + VPD+FT+N I + + ID+++K+
Sbjct: 220 STVTYNTIIDGYGKAKMFEEMENTLTDMIESGSSVPDLFTFNSIIGAYGSKGRIDKMEKW 279
Query: 250 LDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILY 309
E D +K N++ + + S L EK +T++ I +
Sbjct: 280 YTEFQLMGLRQD--IKTFNILIRSYGKAGMYGKMRSVLEFMEKRFFSPSIVTHNIFIETF 337
Query: 310 AGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD 369
G+ + +++ + ++ K + Y ++S+Y GH+ +V I+ Q + S D
Sbjct: 338 GKAGDIETMEEYFSKMKHLGIKPNTVTYCSLVSAYSKAGHIMKVDSILRQVENSDVI-LD 396
Query: 370 ISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
N ++ A+ G EK +E + + + C P
Sbjct: 397 TPFFNCVISAYGRAGDIEKMSELFLGMEGRKCKP 430
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 88/186 (47%), Gaps = 2/186 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+ +++ Y +K E+ + + L + +N ++ Y G K+ V+E +
Sbjct: 259 TFNSIIGAYGSKGRIDKMEKWYTEFQLMGLRQDIKTFNILIRSYGKAGMYGKMRSVLEFM 318
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+++ P I T+N++I + +I+ ++++ +M G + V Y +LV+ Y A H
Sbjct: 319 EKRFFSPSIVTHNIFIETFGKAGDIETMEEYFSKMK-HLGIKPNTVTYCSLVSAYSKAGH 377
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
++ + S L + E S ++ +I Y G+ +K+ +++ + K K S +
Sbjct: 378 IMKVD-SILRQVENSDVILDTPFFNCVISAYGRAGDIEKMSELFLGMEGRKCKPDSITFA 436
Query: 339 CILSSY 344
++ +Y
Sbjct: 437 TMIQAY 442
>gi|297851236|ref|XP_002893499.1| hypothetical protein ARALYDRAFT_335936 [Arabidopsis lyrata subsp.
lyrata]
gi|297339341|gb|EFH69758.1| hypothetical protein ARALYDRAFT_335936 [Arabidopsis lyrata subsp.
lyrata]
Length = 198
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 19/178 (10%)
Query: 128 ATRIDLMTKVFGIHSGERYFEGLPLSAKT-SETYTALLHLYA-GAKWTEKAEELFERVKQ 185
R+ L+ V G+ E++FE +P + S+ YT +L Y AK EKAE +F ++++
Sbjct: 10 VARLHLIDNVLGLEEAEKFFETIPQDKRDDSDLYTTILSFYTRSAKTLEKAELIFHKMRK 69
Query: 186 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 245
+N MM+LY +G+ + V ++ ++++ N D T N+ + A +
Sbjct: 70 LGYLSKPCPFNHMMSLYNQIGKRDMVHQILSQMEKNNAKSDNRTLNIILGLLAES----- 124
Query: 246 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 303
+ DW + Y+ +V A L AE+S+ YD
Sbjct: 125 -----------HSSTLDWRMSCEMAKTYLKQGLVVEA-IKMLRRAEESVVDPDSKKYD 170
>gi|168045050|ref|XP_001774992.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673739|gb|EDQ60258.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 385
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 103/239 (43%), Gaps = 5/239 (2%)
Query: 129 TRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNL 188
T+ + K I R +EG TYTA++ A +A ++F+ + +
Sbjct: 80 TQSNQFKKALEIFESMRLYEG---CVPDKYTYTAMIKGCCEAGLYVQARKIFDEMMIEGV 136
Query: 189 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 248
+ + YN ++ Y G +V V+ ++ NV PD T+N I I ++++
Sbjct: 137 KPSIVTYNILIHGYGKAGLFREVERVLSTMEANNVAPDTVTWNTLIRVFGLNCKIPEMEQ 196
Query: 249 FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIIL 308
+ + G D V +L++ Y TA ES T + + ITY+ ++
Sbjct: 197 AYEGL-LRQGLQPDMVTLNSLISAYGTAGLFEKMESVTQYMQRYNYPMTR-ITYNIIMEA 254
Query: 309 YAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSD 367
Y G D++++ WK ++ K S + +LS+Y G+ V +++ Q + +D
Sbjct: 255 YGRAGMVDQMEETWKRMKAEFVKPNSSTFCSMLSAYGRHGYWHNVEKVMRQARYFDAAD 313
>gi|224125312|ref|XP_002329774.1| predicted protein [Populus trichocarpa]
gi|222870836|gb|EEF07967.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 109/266 (40%), Gaps = 55/266 (20%)
Query: 141 HSGER-YFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMM 199
H+ R Y +P K YTALL+ YA K EKA F+++ + + L++N +M
Sbjct: 12 HTRSREYANAIPQKLKGFMVYTALLNCYAREKDVEKAVATFKKLTDIGVMRSPLVFNILM 71
Query: 200 TLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG 259
LY VV D TY + C +K + EM+
Sbjct: 72 YLYFQTDG--------------EVVGDWNTYCVAADRC--------LKAGIMEMAM---- 105
Query: 260 SDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR-QWITYDFLIILYAGLGNKDKI 318
+ L + E IT++ + I +D L+ LYA GNKD++
Sbjct: 106 -------------------------TMLKKLEGQITEKTKSIAFDTLLKLYARKGNKDEL 140
Query: 319 DQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLG 378
+IWKS + K+ ++ Y+ ++SS LML ++ + +W+ S + N L+
Sbjct: 141 YRIWKSDE-KRDKIYNKGYMSMISSLLMLDDIEAAEMMFKKWESRGLS-YYFRVPNILIN 198
Query: 379 AFSDVGLTEKANEFHMLLLQKNCAPT 404
A+ L EKA + K P+
Sbjct: 199 AYCRNNLLEKAGSLIDHAMMKGSEPS 224
>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 69/138 (50%), Gaps = 5/138 (3%)
Query: 136 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 195
K F +H E +G+ T TYT+L+++ T +A+ELFE+V + + +M
Sbjct: 416 KAFALHD-EMMTDGI---KPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMM 471
Query: 196 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 255
N +M + + G +++ +++E+ R N+ PD TYN + ++ ++ + EM
Sbjct: 472 NTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMK- 530
Query: 256 DSGGSDDWVKYVNLVNIY 273
G D + Y L++ Y
Sbjct: 531 RRGIKPDHISYNTLISGY 548
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 87/214 (40%), Gaps = 14/214 (6%)
Query: 181 ERVKQSNL----SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 236
E VKQ + ++N L++ L+M ++E +++ EI+ K +V D TYN+ I+
Sbjct: 353 EMVKQGMVPTFYTYNTLIHG----LFME-NKIEAAEILIREIREKGIVLDSVTYNIVING 407
Query: 237 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 296
+ + DEM D G Y +L IY+ E+ L E
Sbjct: 408 YCQHGDAKKAFALHDEMMTD-GIKPTQFTYTSL--IYVLCRRNKTREADELFEKVVGKGM 464
Query: 297 RQ-WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 355
+ + + L+ + GN D+ + K + Y C++ G +E E
Sbjct: 465 KPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARE 524
Query: 356 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
++ + K+ IS N L+ +S G T+ A
Sbjct: 525 LMGEMKRRGIKPDHISY-NTLISGYSKKGDTKHA 557
>gi|356557985|ref|XP_003547290.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 692
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 99/207 (47%), Gaps = 3/207 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T + +++ YA +KA L++R K N S +A+ ++ ++ +Y G +K V +E+
Sbjct: 228 TCSGMVYAYARTNNVDKAVNLYDRAKAENWSLDAVTFSTLIKMYSMAGNYDKCLEVYQEM 287
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K V P++ TYN + + + Q K EM +G S D++ Y +L+ +Y A
Sbjct: 288 KVLGVKPNVATYNTLLGAMLRSKKHRQAKAIHKEMK-SNGVSPDFITYASLLEVYTRAQC 346
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ-KMTSRNY 337
+A E + + Y+ L+ + A +G D+ +I+ ++ + + S +
Sbjct: 347 SEDA-LGVYKEMKGNGMDMTADLYNKLLAMCADVGYTDRAVEIFYEMKSSGTCQPDSWTF 405
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSA 364
+++ Y G + EV ++++ QS
Sbjct: 406 SSLITIYSRSGKVSEVEGMLNEMIQSG 432
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 80/177 (45%), Gaps = 10/177 (5%)
Query: 83 GNQATVSELRHILKELRKSQRYKHALEISEWMVTH---KEFVLSDS--DYATRIDLMTKV 137
G + V+ +L + +S++++ A I + M ++ +F+ S + TR
Sbjct: 291 GVKPNVATYNTLLGAMLRSKKHRQAKAIHKEMKSNGVSPDFITYASLLEVYTRAQCSEDA 350
Query: 138 FGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN-LSFNALMYN 196
G++ E G+ + T++ Y LL + A +T++A E+F +K S ++ ++
Sbjct: 351 LGVYK-EMKGNGMDM---TADLYNKLLAMCADVGYTDRAVEIFYEMKSSGTCQPDSWTFS 406
Query: 197 EMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
++T+Y G+V +V ++ E+ + P IF I D V K ++
Sbjct: 407 SLITIYSRSGKVSEVEGMLNEMIQSGFQPTIFVMTSLIRCYGKAKRTDDVVKIFKQL 463
>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 107/268 (39%), Gaps = 5/268 (1%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
A +V + G L ++K L K AL + +V + F L Y T I
Sbjct: 115 AFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVA-QGFQLDQVSYGTLI 173
Query: 132 DLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLS 189
+ + K + R L + + YT ++H K A +L+ + +S
Sbjct: 174 NGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGIS 233
Query: 190 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 249
N Y ++ + +G +++ ++ E+K KN+ PD++T+N+ I + A ID+
Sbjct: 234 PNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSL 293
Query: 250 LDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILY 309
+EM + V Y +L++ HL A + E+ I Q +Y L+
Sbjct: 294 FEEMK-HKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGI-QPNVYSYTILLDAL 351
Query: 310 AGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
G + Q ++ L + + R Y
Sbjct: 352 CKGGRLENAKQFFQHLLVKGYHLNVRTY 379
>gi|302829725|ref|XP_002946429.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
nagariensis]
gi|300268175|gb|EFJ52356.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
nagariensis]
Length = 961
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 158/364 (43%), Gaps = 26/364 (7%)
Query: 56 DDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWM- 114
+DL + +++ P+ A + I++ + + + ++ L LKEL K K A+EI +W+
Sbjct: 207 EDLLKIVLKLA-PQEPAVDAIKQGLYYLDSSAMAAL---LKELAKQGYLKRAVEIFDWLR 262
Query: 115 ---VTHKEFVLSD-SDYATRIDLMTKVFGIHSGERYFEGLPLSAKTS--------ETYTA 162
+H+ L D Y T M G H R L L A+ TY+A
Sbjct: 263 NLEPSHELSSLCDLYTYTT----MISQCGSHQQLR--RALELVAEMRSRGIDCNVHTYSA 316
Query: 163 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 222
L+++ A + A+++++++ + S N + YN ++ +Y+ Q E+ V++ ++++
Sbjct: 317 LMNVCIKANELDLAQDVYKQMLEEGCSPNLVTYNILIDVYVKRCQWEEAVKVLDTLEKQA 376
Query: 223 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 282
+ ++ TYN IS+C + +Q K ++M +G Y L++ Y V
Sbjct: 377 IQAEVRTYNTVISACNKSGQPEQALKVYEKM-LAAGVKPSATTYTALISAYGKKGQ-VEK 434
Query: 283 ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILS 342
+ + +R ITY LI G + +++ + K + +++
Sbjct: 435 ALEIFRDMIRRGCERNVITYSSLISACEKAGRWEMALELFSKMHKENCKPNVVTFNSLIA 494
Query: 343 SYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCA 402
+ GH ++ E+ +Q + I+ C L+ A+ G +A + + + C
Sbjct: 495 ACSHGGHWEKASELFEQMQTQGCKPDSITYCG-LITAYERGGQWRRALKAFEQMQTQGCH 553
Query: 403 PTNA 406
P A
Sbjct: 554 PDAA 557
>gi|225450630|ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial [Vitis vinifera]
gi|296089757|emb|CBI39576.3| unnamed protein product [Vitis vinifera]
Length = 586
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 131/325 (40%), Gaps = 19/325 (5%)
Query: 92 RHILKELRKSQRYKHALEISEWMVT-HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGL 150
+ ++ + + Q AL+I + H+ F + Y I+ ++K E L
Sbjct: 102 KRVVSMISRQQNLDLALQIFDHAGKFHRNFAHNYETYLAMIEKLSKARAFEPMETLISQL 161
Query: 151 PLSA-KTSET-YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 208
S K E + ++ Y A + A F R+ L + +N ++ + +
Sbjct: 162 HKSQIKCGENLFITVIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRF 221
Query: 209 EKVALVVEEIKRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 267
+ V L+ + ++K +VP++FT N+ + + +ID + L+EM G + V Y
Sbjct: 222 DLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPA-MGFIPNVVTYT 280
Query: 268 NLVNIYITASHLVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWK 323
++ Y++ +V A I R W+ TY L+ Y G ++
Sbjct: 281 TILGGYVSKGDMVGAR-----RVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMD 335
Query: 324 SLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA--CNRLLGAFS 381
+ + + Y I+ +Y K+ GE+++ + S+ C R++
Sbjct: 336 EMEENRVEPNDVTYGVIIEAYC---KEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLC 392
Query: 382 DVGLTEKANEFHMLLLQKNCAPTNA 406
+ G E A E LL+KNC P NA
Sbjct: 393 EEGKVEVACELWKKLLKKNCTPDNA 417
>gi|359477372|ref|XP_002280003.2| PREDICTED: pentatricopeptide repeat-containing protein At3g23020
[Vitis vinifera]
Length = 881
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 109/247 (44%), Gaps = 4/247 (1%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
+SE Y+A + Y +AE+ F K+S + L +N M+ Y + EK ++
Sbjct: 498 SSECYSANIDAYGERGHILEAEKAFLCCKESR-KLSVLEFNVMIKAYGISNRYEKACQLI 556
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275
+ ++ V+PD F+YN I A+ + K +L +M ++ D + Y +++ +I
Sbjct: 557 DSMENHGVLPDKFSYNSLIQILASADLPHKAKFYLMKMQ-ETQLVSDCIPYCAVISSFIK 615
Query: 276 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
L AE E Q + Y LI +A +GN + +LR M +
Sbjct: 616 LGQLEMAE-GLFKEMIGYNVQPDVVVYGILINAFADVGNVREAVNYVNALRNAGLPMNAV 674
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 395
Y ++ Y +G+L+E E + S D+ + N ++ +S+ + ++A E
Sbjct: 675 IYNSLIKLYTKVGYLEEAQEAYKMLQASEVGP-DVYSSNCMIDLYSERSMVKQAEEIFES 733
Query: 396 LLQKNCA 402
L +K A
Sbjct: 734 LKRKGDA 740
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 115/224 (51%), Gaps = 6/224 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y +L+ + A A KA+ +++++ L + + Y +++ ++ +GQ+E + +E+
Sbjct: 570 SYNSLIQILASADLPHKAKFYLMKMQETQLVSDCIPYCAVISSFIKLGQLEMAEGLFKEM 629
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
NV PD+ Y + I++ A N+ + +++ + ++G + V Y +L+ +Y +
Sbjct: 630 IGYNVQPDVVVYGILINAFADVGNVREAVNYVNALR-NAGLPMNAVIYNSLIKLYTKVGY 688
Query: 279 LVNA-ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
L A E+ +++A S + + +I LY+ + ++I++SL+ K ++
Sbjct: 689 LEEAQEAYKMLQA--SEVGPDVYSSNCMIDLYSERSMVKQAEEIFESLK-RKGDANEFSF 745
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFS 381
+L Y +G LKE +I+ + ++ D+ + N +LG ++
Sbjct: 746 AMMLCMYKRIGKLKEAFQIVQKMRELGLVT-DLLSYNNVLGFYA 788
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 3/202 (1%)
Query: 151 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 210
P +S TY L+ Y A +A + F + + + N + +N M+ + + GQ+E+
Sbjct: 319 PHVCLSSYTYNTLIDTYGKAGQLREASDTFAWMLREGIIPNTVTFNTMIHICGNHGQLEE 378
Query: 211 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 270
A ++++++ PD TYN+ IS A NID+ + +M ++ D V Y L+
Sbjct: 379 AASLMQKMEELRCPPDTRTYNILISLHAKHNNIDRAASYFKKMK-EARLEPDLVSYRTLL 437
Query: 271 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 330
+ + HLV + E ++ + T L +Y G K +W +
Sbjct: 438 YAF-SIRHLVGEAEILVSEMDERGLEIDEFTQSALTRMYIEAGMLKK-SWLWFRRFHLEG 495
Query: 331 KMTSRNYICILSSYLMLGHLKE 352
M+S Y + +Y GH+ E
Sbjct: 496 NMSSECYSANIDAYGERGHILE 517
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 120/316 (37%), Gaps = 56/316 (17%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
A ++ S G V I+ L KS R A ++ + M V Y T I
Sbjct: 449 ALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLI 508
Query: 132 DLMTKVFGIHSGERYFEGLP-------------LS-----AKTSETYTALLHL------- 166
D + + E + +P LS ++ + Y +L L
Sbjct: 509 DGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKV 568
Query: 167 -----YAGAKWT---EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
AGA E+A LFE + NL + + + ++ GQVE +++ +
Sbjct: 569 TFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLM 628
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
V P++ TYN + + I++ +FL+EM SG D + Y +LV AS
Sbjct: 629 GNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMV-SSGCVPDSITYGSLVYALCRASR 687
Query: 279 LVNAESSTLVEAEKSIT-QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
+A LV KS +TY+ L +D +WKS + T+Q +T
Sbjct: 688 TDDALQ--LVSELKSFGWDPDTVTYNIL------------VDGLWKSGQ-TEQAIT---- 728
Query: 338 ICILSSYLMLGHLKEV 353
+L + GH +V
Sbjct: 729 --VLEEMVGKGHHPDV 742
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/199 (19%), Positives = 90/199 (45%), Gaps = 15/199 (7%)
Query: 57 DLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKEL-RKSQRYKHALEISEWMV 115
D+ SR+ R +P +V+ + + + + E R +++E+ RKS ++ ++
Sbjct: 767 DMSSRVSRCCVPNVVTYSVLINGLCKVGR--IDEARELIQEMMRKS------CDVLPNII 818
Query: 116 THKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEK 175
T+ F+ D + +M + + R +G + + T++ L+ T++
Sbjct: 819 TYNSFL----DGLCKQSMMAEACELMRSLR--DGSLRVSPDTVTFSTLIDGLCKCGQTDE 872
Query: 176 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
A +F+ + N + YN +M ++E+ ++E + K V PD+ TY++ +
Sbjct: 873 ACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVD 932
Query: 236 SCAATLNIDQVKKFLDEMS 254
+ ++D+ + L M+
Sbjct: 933 AFCKASHVDEALELLHGMA 951
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
S TY +L++ A T+ A +L +K + + YN ++ GQ E+ V+E
Sbjct: 672 SITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLE 731
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 254
E+ K PD+ TYN I S ++++ ++ +MS
Sbjct: 732 EMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMS 769
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 56/120 (46%), Gaps = 6/120 (5%)
Query: 140 IHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMM 199
I GE +G+ A T TY +++ + ELFE + + + + YN ++
Sbjct: 202 IFRGEMARDGV---APTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLI 258
Query: 200 TLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM---SCD 256
G +E+ + ++ ++ VP++ TY++ I+ ID+ ++ + EM SCD
Sbjct: 259 DSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCD 318
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 93/218 (42%), Gaps = 13/218 (5%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTH--KEFVLSDSDYAT 129
A V++ V +G+ V ++ L K+ + A + M + + V + Y+
Sbjct: 726 AITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSV 785
Query: 130 RIDLMTKVFGIHSGERYFEGLPLSAKTSE------TYTALLHLYAGAKWTEKAEELFERV 183
I+ + KV I + + K+ + TY + L +A EL +
Sbjct: 786 LINGLCKVGRIDEARELIQ--EMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSL 843
Query: 184 KQSNL--SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL 241
+ +L S + + ++ ++ GQ ++ V +++ VP++ TYN+ ++ T
Sbjct: 844 RDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTD 903
Query: 242 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
+++ ++ M D G + D + Y LV+ + ASH+
Sbjct: 904 KMERAHAMIESMV-DKGVTPDVITYSVLVDAFCKASHV 940
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 50/254 (19%), Positives = 102/254 (40%), Gaps = 22/254 (8%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNL--SFNALMYNEMMTLYMSVGQVEKVALVVE 216
TY + L T +A EL ++ +L S + + ++ ++ GQ+++ V +
Sbjct: 325 TYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFD 384
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
++ VP++ TYN ++ +++ ++ M D G + D + Y LV+ + A
Sbjct: 385 DMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV-DKGVTPDVITYSVLVDAFCKA 443
Query: 277 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK-------IDQIWKSLRMTK 329
S + A A + T +T++ +I GL D+ D + +
Sbjct: 444 SRVDEALELLHGMASRGCTP-NVVTFNSII---DGLCKSDRSGEAFQMFDDMALKHGLVP 499
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
K+T Y ++ G + ++D A D D A N + S +G +A
Sbjct: 500 DKIT---YCTLIDGLFRTGRAGQAEALLD-----AMPDPDTYAFNCCINGLSKLGDVSRA 551
Query: 390 NEFHMLLLQKNCAP 403
+ + +L+ P
Sbjct: 552 LQVYNRMLELELVP 565
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 1/124 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY AL+H + E+A + E + S +++ Y ++ + + +V E+
Sbjct: 639 TYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSEL 698
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K PD TYN+ + + +Q L+EM G D V Y L++ A
Sbjct: 699 KSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMV-GKGHHPDVVTYNTLIDSLCKAGD 757
Query: 279 LVNA 282
L A
Sbjct: 758 LEEA 761
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 106/248 (42%), Gaps = 3/248 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L++ + E AE L ++ + N +++N M+ Y G V+ + +
Sbjct: 319 TYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAM 378
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
++ V DI+TYN +D+ K L M + G ++V Y L++I+
Sbjct: 379 EKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIM-IEMGVVPNYVTYTTLISIHCKDGD 437
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+V A AEK T +TY+ +I Y G+ + ++ K + Y
Sbjct: 438 MVEARRLFREMAEKGATP-SVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYA 496
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
++ + + G + ++ ++ KQ T + ++ A L+ + G +E A + + +L+
Sbjct: 497 SLVHGHCVNGKVDVALKLFEEMKQRGT-EPNVVAYTALISGLAKEGRSEAAFQLYDDMLK 555
Query: 399 KNCAPTNA 406
P ++
Sbjct: 556 AGLIPDDS 563
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 41/231 (17%), Positives = 98/231 (42%), Gaps = 3/231 (1%)
Query: 173 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 232
+ A L + + + +S NAL YN ++ Y+ +V ++E ++ + + + TY +
Sbjct: 193 VDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTI 252
Query: 233 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 292
+ S + +I +V+ +EM ++ D ++ Y ++N Y A ++ A + L E
Sbjct: 253 LVDSLSTARDISKVEALFNEMKANNVVGDVYL-YTAVINAYCRAGNMRRA-AKVLDECVG 310
Query: 293 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 352
+ + TY LI + +G + + + ++ + + ++ Y G + +
Sbjct: 311 NGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDD 370
Query: 353 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
+I ++ + DI N L V ++A ++++ P
Sbjct: 371 ALKIKAAMEKMGV-ELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVP 420
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 64/155 (41%), Gaps = 3/155 (1%)
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKT--SETYTALLHLYAGAKWTEKAEELFERVKQSNL 188
+D + K + R + +P + + Y +LL Y K + +E+ E ++ +
Sbjct: 184 VDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGI 243
Query: 189 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 248
Y ++ + + KV + E+K NVV D++ Y I++ N+ + K
Sbjct: 244 EATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAK 303
Query: 249 FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAE 283
LDE +G + Y L+N + + AE
Sbjct: 304 VLDE-CVGNGVEPNERTYGVLINGFCKIGQMEAAE 337
>gi|356577073|ref|XP_003556653.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 581
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
++ T+T +LH +A++LF+ ++ ++ NA MYN +M Y V +V + +L+
Sbjct: 298 PSAATFTTILHALCREGNVVEAQKLFDGIQDVGIAPNAAMYNTLMDGYFKVREVGQASLL 357
Query: 215 VEEIKRKNVVPDIFTYNLWISS 236
EE++RK V PD T+N+ +
Sbjct: 358 YEEMRRKGVSPDCVTFNILVGG 379
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 97/214 (45%), Gaps = 4/214 (1%)
Query: 191 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 250
+ + Y ++ + G +EK ++ ++ + VP++ TY+ + ++DQ
Sbjct: 188 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLF 247
Query: 251 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYA 310
M+ G + V Y L++ + A+H V+A + E + ++Y+ L+ Y
Sbjct: 248 RRMT-SKGCVPNVVTYTTLIH-GLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYC 305
Query: 311 GLGNKDKIDQIWKSLRMTKQKMTSR-NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD 369
LG ++ Q++K + K + R Y C++ + L+E +++ K +A D D
Sbjct: 306 RLGRIEEAKQLFKEM-AAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPD 364
Query: 370 ISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
+ + ++ +S +A EF ++ +N AP
Sbjct: 365 VVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAP 398
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 96/233 (41%), Gaps = 36/233 (15%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT L+H A + A L + + + + + YN ++ Y +G++E+ + +E+
Sbjct: 261 TYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEM 320
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K+ +PD TY + +++ + L+ M +G D V Y +V Y A
Sbjct: 321 AAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKR 380
Query: 279 LVNAES-----------------STLV-------------EAEKSITQRQWITYDFLIIL 308
V A S+L+ E K++ + +TY +I
Sbjct: 381 FVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDKPDVVTYTIVI-- 438
Query: 309 YAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 361
GL D+ ++ +L + ++ + R + + ++G L +G++ + WK
Sbjct: 439 -EGLCGTDRTEE---ALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWK 487
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 83/191 (43%), Gaps = 15/191 (7%)
Query: 221 KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLV 280
K+V PD+ TY+ I+ +D+ + L EM G + D V Y ++V+ +
Sbjct: 39 KSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMD 98
Query: 281 NAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI-C 339
A + E + + T+ LI G N K+D+ +L++ K+ +TS +
Sbjct: 99 RA-CEMVREMKLKGVEPDKFTFSALI---TGWCNARKVDE---ALKLYKEILTSSCRLDA 151
Query: 340 ILSSYLMLGHLKE--VGEIID-----QWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
+ SS L+ G +E +GE + + ++ D+ L+ F G EKA +
Sbjct: 152 VSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKM 211
Query: 393 HMLLLQKNCAP 403
++ + C P
Sbjct: 212 LGVMEGRKCVP 222
>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 947
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 113/263 (42%), Gaps = 19/263 (7%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDS-DYATR 130
A +V + G Q+ V +LK L + ++ AL + W + K V D Y T
Sbjct: 413 AISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHV--WHLMLKRGVTPDEVSYCTL 470
Query: 131 IDLMTKVFGIHSGERYFEGLPL--------SAKTSETYTALLHLYAGAKWTEKAEELFER 182
+DL+ K+ GE +F L L +++ + +++ + + +AEE F R
Sbjct: 471 LDLLFKM-----GE-FFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNR 524
Query: 183 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 242
+K+ + + Y ++ Y +G VE+ V E+++++ ++P I YN I +
Sbjct: 525 MKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKK 584
Query: 243 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 302
+V L EM C G S + V Y L+ + L A ++ EK I
Sbjct: 585 TREVMDLLSEM-CLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICS 643
Query: 303 DFLIILYAGLGNKDKIDQIWKSL 325
+ LY LG D+ + + + +
Sbjct: 644 KIVSSLYR-LGRIDEANMLLQKM 665
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 57/124 (45%), Gaps = 3/124 (2%)
Query: 116 THKEFVLSDSD-YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKW 172
+ K F L +S Y I + K + ++ F L L + + TY L+H Y+ A
Sbjct: 700 SSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGN 759
Query: 173 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 232
A L + + + L+ N + YN ++ G +++ + +++ K + P++ +YN+
Sbjct: 760 VNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNI 819
Query: 233 WISS 236
I
Sbjct: 820 LIDG 823
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 51/268 (19%), Positives = 111/268 (41%), Gaps = 15/268 (5%)
Query: 145 RYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMS 204
R FE S + +L +Y + A +F+ + + + N +++ +
Sbjct: 139 RVFEDFKFSPTV---FDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVR 195
Query: 205 VGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD-DW 263
G+ LV + I R +VPD+FT ++ +++ ++ F+ EM D G + +
Sbjct: 196 KGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEM--DYLGFELNV 253
Query: 264 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 323
V Y +L++ ++ + AE + E+ I R +T L +L G + K+++ K
Sbjct: 254 VTYNSLIDGCVSIGDMERAEMVLKLMGERGIL-RNKVT---LTLLIKGYCRQCKLEEAEK 309
Query: 324 SLRMTKQK----MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGA 379
LR ++ + Y ++ Y + + + + D+ ++ CN L+
Sbjct: 310 VLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLR-MNLFICNALING 368
Query: 380 FSDVGLTEKANEFHMLLLQKNCAPTNAS 407
+ G +A M ++ + P + S
Sbjct: 369 YCKNGQVSEAERLLMRMVDWDLEPESYS 396
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 57/121 (47%), Gaps = 1/121 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY AL++ + ++A++LF+++ L+ N + YN ++ Y G + + ++
Sbjct: 781 TYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKM 840
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
++ + P + TY+ I ++ + LDEM + + K+V LV ++
Sbjct: 841 LKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMR-ELFADQNIAKFVKLVEGHVKCGE 899
Query: 279 L 279
+
Sbjct: 900 V 900
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 109/260 (41%), Gaps = 6/260 (2%)
Query: 146 YFEGL-PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMS 204
YF + P ++ +YT ++ A +K ++A ELFE +K + S N + Y ++ +
Sbjct: 96 YFRAVTPKASLDVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLK 155
Query: 205 VGQVEKVALVVEEIKRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDW 263
G++E EE+ + VP TY + I C A + D K F E G D
Sbjct: 156 AGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVF--EQMVQKGCVPDT 213
Query: 264 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 323
+ Y L++ + AS + A V K + +TY ++ + L ++ ++
Sbjct: 214 ITYTTLIDGFSKASKMDEARKLLDVMLTKG-PEPTAVTYGSIVHGFCKLDMINEAKEVIA 272
Query: 324 SLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDV 383
+R + + +LS YL G +E +++ + + D+ L+
Sbjct: 273 QMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAP-DVILYTSLIDLLFST 331
Query: 384 GLTEKANEFHMLLLQKNCAP 403
G +A +++K CAP
Sbjct: 332 GRVPEARHVFDSMIEKGCAP 351
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 103/255 (40%), Gaps = 16/255 (6%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
YT+L+ L +A +F+ + + + +AL Y ++ + +G VE ++E +
Sbjct: 321 YTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMA 380
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
+ V PD F YN + +DQ D M SG + V + L++
Sbjct: 381 KSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVA-SGIKPNAVTFNVLMHGLFKDGKT 439
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 339
A S EK ++Y LI GLG ++ + + + Q+M R I
Sbjct: 440 DRAFSLFKEMLEKEEVPPTLVSYTILI---DGLGKAGRVSEAF----LQFQEMIDRGIIP 492
Query: 340 ILSSYLML-------GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
+Y L G + E ++++ + + D+ A + L+ D + + A +
Sbjct: 493 ECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNP-DVQAYSALITGLIDSSMVDTAWDV 551
Query: 393 HMLLLQKNCAPTNAS 407
++++ CAP +
Sbjct: 552 FQEMMKRGCAPNEVT 566
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 98/231 (42%), Gaps = 8/231 (3%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLS 153
++ L K+Q A ++ E MV K V Y T ID +K + + + +
Sbjct: 184 VIDGLCKAQMLPDACKVFEQMV-QKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTK 242
Query: 154 AK--TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 211
T+ TY +++H + +A+E+ ++++ ++ +++ Y+S G+ E+
Sbjct: 243 GPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEA 302
Query: 212 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
V+ E+ + PD+ Y I +T + + + D M + G + D + Y ++
Sbjct: 303 YQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSM-IEKGCAPDALTYGTIIQ 361
Query: 272 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 322
+ + V A L KS Y+ L+ Y L +++DQ +
Sbjct: 362 NFSKIGN-VEAAGEILELMAKSGVGPDCFAYNSLMDGYVKL---ERVDQAF 408
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 101/245 (41%), Gaps = 3/245 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT ++ A+ ++AE +F+++ + N YN ++ Y+S+G+ ++V ++EE+
Sbjct: 236 TYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEM 295
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + PD +TY ++ + + F D M G Y L++ Y T
Sbjct: 296 SARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSM-IRKGIKPKVSTYGILIHGYATKGA 354
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L S + E ++ I ++ YA G DK I+ +R NY
Sbjct: 355 LSEMHSFLDLMVENGLSPDHHI-FNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYG 413
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
++ + LG + + +Q + +I N L+ V E+A E +L
Sbjct: 414 ALIDALCKLGRVDDAEVKFNQMINEGVTP-NIVVFNSLVYGLCTVDKWERAEELVYEMLD 472
Query: 399 KNCAP 403
+ P
Sbjct: 473 QGICP 477
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 5/160 (3%)
Query: 126 DYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLH-LYAGAKWTEKAEELFER 182
+Y ID + K+ + E F + T + +L++ L KW E+AEEL
Sbjct: 411 NYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKW-ERAEELVYE 469
Query: 183 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 242
+ + NA+ +N ++ +VG+V + +++ ++ V PD F+Y IS T
Sbjct: 470 MLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGR 529
Query: 243 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 282
D+ +K D M G S V Y L++ Y +AS + +A
Sbjct: 530 TDEAEKVFDGMV-SIGLSPTEVTYNTLLHGYCSASRIDDA 568
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+YT L+ Y T++AE++F+ + LS + YN ++ Y S +++ + E+
Sbjct: 516 SYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREM 575
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
RK V P + TYN + T + K+ M +SG D Y ++N
Sbjct: 576 LRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNM-INSGTKCDIYTYNIILN 627
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 97/249 (38%), Gaps = 8/249 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSN---LSFNALMYNEMMTLYMSVGQVEKVALVV 215
+YT LL K E+A EL + + N + Y+ ++ + + GQV+K +
Sbjct: 163 SYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLF 222
Query: 216 EEIKRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274
E+ + + PD+ TY I C A L D+ + +M D+G + Y L++ Y+
Sbjct: 223 LEMIDRGIPPDVVTYTTVIDGLCKAQL-FDRAEGVFQQM-IDNGFKPNNYTYNCLIHGYL 280
Query: 275 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 334
+ L E + TY L+ G + + S+ K
Sbjct: 281 SIGKWKEV-VQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKV 339
Query: 335 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 394
Y ++ Y G L E+ +D ++ S D N A++ G+ +KA +
Sbjct: 340 STYGILIHGYATKGALSEMHSFLDLMVENGLSP-DHHIFNIFFSAYAKCGMIDKAMDIFN 398
Query: 395 LLLQKNCAP 403
+ Q +P
Sbjct: 399 KMRQHGLSP 407
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 132/325 (40%), Gaps = 5/325 (1%)
Query: 82 EGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIH 141
EG + +R I++ L +S+++ + L++ + MV F Y + K+ +
Sbjct: 25 EGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLG-FRPDKLVYGRAMLAAVKLGDLK 83
Query: 142 SGERYFEGLPLSAKTSET--YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMM 199
FE + Y L+ K AE+LF + NL N + +N ++
Sbjct: 84 LAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLI 143
Query: 200 TLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG 259
Y G+V+ + E +K++ V P I T+N +S I++ + L+E+ C+ G
Sbjct: 144 DGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCN-GF 202
Query: 260 SDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID 319
D Y + + + + A EA + T L+ G +K +
Sbjct: 203 VPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAE 262
Query: 320 QIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGA 379
++ KSL Y I++ Y +G + I+Q + + A N ++
Sbjct: 263 EVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRP-NCIAFNSVIDK 321
Query: 380 FSDVGLTEKANEFHMLLLQKNCAPT 404
F ++ + +KA E+ ++ K AP+
Sbjct: 322 FCEMQMIDKAEEWVKKMVGKGIAPS 346
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 107/255 (41%), Gaps = 6/255 (2%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
A + ETY L+ Y + ++ E ++++ N + Y ++ G++ + +
Sbjct: 344 APSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEM 403
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
V+ ++ + V+P+ YN+ I + + +F DEMS + G+ V Y +L+
Sbjct: 404 VLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGA-TIVTYNSLIKGL 462
Query: 274 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
L AE + ITY+ LI Y+ GN K +++++++ K T
Sbjct: 463 CKMGKLKEAEEMFFLITSTGHCP-DVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPT 521
Query: 334 SRNYICILSSYLMLG-HLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
+ ++S G LKE + ++ Q S D N ++ + + G +KA
Sbjct: 522 INTFHPLISGCSKEGIKLKET--LFNEMLQMNLSP-DRVVYNAMIHCYQETGHVQKAFSL 578
Query: 393 HMLLLQKNCAPTNAS 407
++ P N +
Sbjct: 579 QKEMVDMGVRPDNKT 593
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 45/245 (18%), Positives = 100/245 (40%), Gaps = 3/245 (1%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y +++ Y ++A E+++ L N + +N ++ + + ++K V+++
Sbjct: 280 YNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMV 339
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
K + P + TYN+ I + + L+EM ++G + + Y +L+N +
Sbjct: 340 GKGIAPSVETYNILIDGYGRLCVFSRCFQILEEME-ENGEKPNVISYGSLINCLCKDGKI 398
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 339
+ AE + + I Y+ LI +G + + + + T Y
Sbjct: 399 LEAEMVLRDMVGRGVLPNANI-YNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNS 457
Query: 340 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 399
++ +G LKE E+ + D+ N L+ +S+ G ++K E + + +
Sbjct: 458 LIKGLCKMGKLKEAEEMFFLITSTGHCP-DVITYNSLISGYSNAGNSQKCLELYETMKKL 516
Query: 400 NCAPT 404
PT
Sbjct: 517 GLKPT 521
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%)
Query: 177 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 236
E LF + Q NLS + ++YN M+ Y G V+K + +E+ V PD TYN I
Sbjct: 541 ETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILG 600
Query: 237 CAATLNIDQVKKFLDEM 253
+ + K +D+M
Sbjct: 601 HLKEGKLSETKDLVDDM 617
>gi|125563762|gb|EAZ09142.1| hypothetical protein OsI_31412 [Oryza sativa Indica Group]
Length = 962
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 4/122 (3%)
Query: 149 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 208
G P+S E Y +L Y A E+ + ++++++ F+ YN M+ +Y G +
Sbjct: 816 GFPVSL---EAYNCMLDAYGKAGQLEEFAAVLQKMERAGCEFDHYTYNIMINIYGRKGWI 872
Query: 209 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268
E VA V+ E+K + PD+++YN I + + K + EM G + D V Y N
Sbjct: 873 EGVANVLAELKSRGGEPDLYSYNTLIKAYGIAGMPEDAVKLMQEMRI-KGIAADRVTYTN 931
Query: 269 LV 270
L+
Sbjct: 932 LI 933
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 117/281 (41%), Gaps = 42/281 (14%)
Query: 145 RYFEGLPLSAKTS--ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY 202
R + +P SA Y +++ +++ + AE L+ +K S+ + + Y+ ++ +Y
Sbjct: 597 RIYNQMPKSATHPNLRIYCSMIDVFSIMERFTDAEALYLELKASSCVLDMIAYSVIVRMY 656
Query: 203 MSVGQVEKVALVVEEI-KRKNVVPDIF--------------------------------- 228
G+ E LV+E++ K+K +VPD +
Sbjct: 657 TKAGRPEDACLVLEDMEKQKEIVPDKYLFLDMLRTYQKCGLLEKLSDTYYWILKSQVELD 716
Query: 229 --TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESST 286
YN I+ C + +D++ + DEM G + V L++IY A AE
Sbjct: 717 EAMYNCIINCCGRAIPVDELSRIFDEM-IQQGHLANTVTLNVLLDIYGKAGLFNKAEKVF 775
Query: 287 LVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLM 346
L+ ++ + I+Y+ +I +A G+ + + ++ ++ Y C+L +Y
Sbjct: 776 LMARKQGMA--DIISYNTIIAAHAKNGDFRSMIYFVQRMQEAGFPVSLEAYNCMLDAYGK 833
Query: 347 LGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 387
G L+E ++ Q + A +FD N ++ + G E
Sbjct: 834 AGQLEEFAAVL-QKMERAGCEFDHYTYNIMINIYGRKGWIE 873
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 44/234 (18%), Positives = 100/234 (42%), Gaps = 8/234 (3%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
E + L+ Y E+AE + + + ++ N + YN ++T Y V ++K V +
Sbjct: 368 ENWLVRLNAYCQQGKMEEAELVLKSLVDEGIALNVVAYNTVITGYGKVSDMQKAMEVFDR 427
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
+K + PD TY I Q + ++ +SG + + ++N + A
Sbjct: 428 LKSAGLAPDETTYRSMIEGFGRADKYKQAILYYRKLR-NSGFKPNASNFYTMIN--LLAR 484
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
H + ++ ++E ++ + L+ Y +G K+ QI K+ K + +
Sbjct: 485 HDDSEGATEILEDMRAAGCQCSSIVTVLVRAYGSVGRMHKVLQILKACFYKKILFDATSC 544
Query: 338 ICILSSYLMLGHLKEVGEII--DQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
+++ ++ ++E ++ +WK SDF+ + + L+ + + G + A
Sbjct: 545 SILVTGFVQNSLVEEAMRVLREKKWKD---SDFEDNLYHILICSCKEAGCCDDA 595
>gi|42572723|ref|NP_974457.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332646343|gb|AEE79864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 140/331 (42%), Gaps = 20/331 (6%)
Query: 71 SATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSD--YA 128
+A + +R S G + + + ILK + ++K A E+ E ++ K+ L Y
Sbjct: 199 NAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYH 258
Query: 129 TRIDLMTKVFGIHSGERYF-----EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERV 183
I + K + F +G+P +++ TY +L+ K K +++++
Sbjct: 259 MMIYMYKKAGNYEKARKVFSSMVGKGVP---QSTVTYNSLMSFETSYKEVSK---IYDQM 312
Query: 184 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 243
++S++ + + Y ++ Y + E+ V EE+ V P YN+ + + A + +
Sbjct: 313 QRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMV 372
Query: 244 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 303
+Q K M D D W Y +++ Y+ AS + AE + + +TY
Sbjct: 373 EQAKTVFKSMRRDRIFPDLW-SYTTMLSAYVNASDMEGAE-KFFKRIKVDGFEPNIVTYG 430
Query: 304 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK-- 361
LI YA + +K+ ++++ +R++ K I+ + G K G + +K
Sbjct: 431 TLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDAS---GRCKNFGSALGWYKEM 487
Query: 362 QSATSDFDISACNRLLGAFSDVGLTEKANEF 392
+S D A N LL S E+A E
Sbjct: 488 ESCGVPPDQKAKNVLLSLASTQDELEEAKEL 518
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/328 (18%), Positives = 138/328 (42%), Gaps = 12/328 (3%)
Query: 71 SATNVIQRWVSEGNQATVSEL-RHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYAT 129
SA V++++ ++G+Q +L L ++ +++ EI EW+ + S+ D+
Sbjct: 92 SAVPVLRQYKTDGDQGLPRDLVLGTLVRFKQLKKWNLVSEILEWLRYQNWWNFSEIDFLM 151
Query: 130 RIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSN 187
I K+ + ER L T +YTAL+ Y AE +F R++ S
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVALVVEEI---KRKNVVPDIFTYNLWISSCAATLNID 244
+A+ Y ++ ++ + ++ V E + K+ + PD Y++ I N +
Sbjct: 212 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 271
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 304
+ +K M G V Y +L++ + + S + ++S Q ++Y
Sbjct: 272 KARKVFSSM-VGKGVPQSTVTYNSLMSFETSYKEV----SKIYDQMQRSDIQPDVVSYAL 326
Query: 305 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
LI Y +++ +++ + + T + Y +L ++ + G +++ + ++
Sbjct: 327 LIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR 386
Query: 365 TSDFDISACNRLLGAFSDVGLTEKANEF 392
D+ + +L A+ + E A +F
Sbjct: 387 IFP-DLWSYTTMLSAYVNASDMEGAEKF 413
>gi|30694913|ref|NP_191463.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525907|sp|Q9LYT2.2|PP287_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g59040
gi|332646344|gb|AEE79865.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 583
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 140/331 (42%), Gaps = 20/331 (6%)
Query: 71 SATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSD--YA 128
+A + +R S G + + + ILK + ++K A E+ E ++ K+ L Y
Sbjct: 192 NAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYH 251
Query: 129 TRIDLMTKVFGIHSGERYF-----EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERV 183
I + K + F +G+P +++ TY +L+ K K +++++
Sbjct: 252 MMIYMYKKAGNYEKARKVFSSMVGKGVP---QSTVTYNSLMSFETSYKEVSK---IYDQM 305
Query: 184 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 243
++S++ + + Y ++ Y + E+ V EE+ V P YN+ + + A + +
Sbjct: 306 QRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMV 365
Query: 244 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 303
+Q K M D D W Y +++ Y+ AS + AE + + +TY
Sbjct: 366 EQAKTVFKSMRRDRIFPDLW-SYTTMLSAYVNASDMEGAE-KFFKRIKVDGFEPNIVTYG 423
Query: 304 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK-- 361
LI YA + +K+ ++++ +R++ K I+ + G K G + +K
Sbjct: 424 TLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDAS---GRCKNFGSALGWYKEM 480
Query: 362 QSATSDFDISACNRLLGAFSDVGLTEKANEF 392
+S D A N LL S E+A E
Sbjct: 481 ESCGVPPDQKAKNVLLSLASTQDELEEAKEL 511
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/328 (18%), Positives = 138/328 (42%), Gaps = 12/328 (3%)
Query: 71 SATNVIQRWVSEGNQATVSEL-RHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYAT 129
SA V++++ ++G+Q +L L ++ +++ EI EW+ + S+ D+
Sbjct: 85 SAVPVLRQYKTDGDQGLPRDLVLGTLVRFKQLKKWNLVSEILEWLRYQNWWNFSEIDFLM 144
Query: 130 RIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSN 187
I K+ + ER L T +YTAL+ Y AE +F R++ S
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVALVVEEI---KRKNVVPDIFTYNLWISSCAATLNID 244
+A+ Y ++ ++ + ++ V E + K+ + PD Y++ I N +
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 264
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 304
+ +K M G V Y +L++ + + S + ++S Q ++Y
Sbjct: 265 KARKVFSSM-VGKGVPQSTVTYNSLMSFETSYKEV----SKIYDQMQRSDIQPDVVSYAL 319
Query: 305 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
LI Y +++ +++ + + T + Y +L ++ + G +++ + ++
Sbjct: 320 LIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR 379
Query: 365 TSDFDISACNRLLGAFSDVGLTEKANEF 392
D+ + +L A+ + E A +F
Sbjct: 380 IFP-DLWSYTTMLSAYVNASDMEGAEKF 406
>gi|296084463|emb|CBI25022.3| unnamed protein product [Vitis vinifera]
Length = 927
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 93/207 (44%), Gaps = 6/207 (2%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y +++ + A +AE L +++ + +Y+ MM Y +G EK +V + +K
Sbjct: 376 YGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLK 435
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLD--EMSCDSGGSDDWVKYVNLVNIYITAS 277
P + +Y I+ + I +V K L+ +M +G + Y L+N ++
Sbjct: 436 ECGFTPSVISYGCLIN---LYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLK 492
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
NA + + K + + Y+ +I + G+GN D+ + K ++ + + T+R +
Sbjct: 493 DWANA-FAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTF 551
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSA 364
+ I+ + G ++ EI D + S
Sbjct: 552 MPIIHGFARSGDMRRALEIFDMMRWSG 578
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 2/187 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT ++H YA T KA E F ++K L + Y ++ G+++ V E+
Sbjct: 620 TYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREM 679
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + + F YN+ I A ++ + + + +M G D Y + +N A
Sbjct: 680 SSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMK-QEGVQPDIHTYTSFINACCKAGD 738
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ A + T+ E E + TY LI +A +K + ++ ++ K Y
Sbjct: 739 MQRA-TKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYH 797
Query: 339 CILSSYL 345
C+++S L
Sbjct: 798 CLMTSLL 804
>gi|357520891|ref|XP_003630734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524756|gb|AET05210.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 520
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/288 (20%), Positives = 115/288 (39%), Gaps = 15/288 (5%)
Query: 48 ETSNSDGKDDLKSRIF--------RISLPKRSATNVIQRWVSEGNQATVSELRHILKELR 99
ET SD + + IF R LP + + + R G + ++ ++ +L L
Sbjct: 132 ETRESDSSCKITNEIFWIIFTAYSRADLPDGAIRSFV-RMDEFGIKPSIIDVDLLLYTLC 190
Query: 100 KSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE- 158
K + + A + + + +H F+L+ Y+ I+ K+ F+ + +
Sbjct: 191 KKKHVRQAQQFFDQVKSH--FLLTTKTYSILINGWGKIGDSGKARELFDAMLEQGCHVDL 248
Query: 159 -TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
Y LL ++A + + + +A Y+ + Y V V+++
Sbjct: 249 LAYNNLLEALCKGGHVDEAMDFLNDMLSKKVEPDAFTYSIFIRSYCDANNVHSAFGVLDK 308
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
++R N++P++FTYN I +++ + LDEM D W N + Y
Sbjct: 309 MRRCNLLPNVFTYNCIIKRLCKIKKVEEAYQLLDEMISSGLKPDTWS--YNAIQAYHCDH 366
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 325
VN + EK + TY+ ++ L +G DK ++W+ +
Sbjct: 367 CEVNRALKLISRMEKDVCFPDRHTYNMVLKLLIRIGRFDKATEVWECM 414
>gi|326528911|dbj|BAJ97477.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 913
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 91/207 (43%), Gaps = 2/207 (0%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y+ ++H + + ++AEEL +++ + Y+ MM Y + +K +V E +K
Sbjct: 385 YSNIIHAHCQSGNMDRAEELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLK 444
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
P I +Y I+ + + EM SG + Y L++ +I
Sbjct: 445 ECCFTPSIISYGCLINLYVKIGKVAKAIAISKEME-SSGIKHNNKTYSMLISGFIHLHDF 503
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 339
NA E KS Q Y+ LI + +GN D+ +I + ++ + + ++R +
Sbjct: 504 TNA-FRIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRP 562
Query: 340 ILSSYLMLGHLKEVGEIIDQWKQSATS 366
I+ + + G +K +I+D ++S +
Sbjct: 563 IIEGFAVAGDMKRALDILDLMRRSGCA 589
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 83/188 (44%), Gaps = 4/188 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT ++ YA KA E F ++K+ L + +Y ++ G+++ V E+
Sbjct: 629 TYTIIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREM 688
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + + F YN+ I A ++ + + +M D G + Y + +N A
Sbjct: 689 SSQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKED-GVPPNIHTYTSYINACCKAGD 747
Query: 279 LVNAESSTLVEAEKSITQRQWI-TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
+ A+ T+++ + + + TY LI +A D+ + ++ +++ K Y
Sbjct: 748 MQRAQ--TVIDEMSDVGLKPNLKTYTTLIKGWARASLPDRALKCFEEMKLAGLKPDEAAY 805
Query: 338 ICILSSYL 345
C+++S L
Sbjct: 806 HCLVTSLL 813
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 34/204 (16%), Positives = 92/204 (45%), Gaps = 2/204 (0%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
++ + ++ +A A ++A ++ + +++S + + YN ++ + QVE+ V+
Sbjct: 556 SNRAFRPIIEGFAVAGDMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVL 615
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275
++ + P+ TY + + AAT +I + ++ ++ + G D Y L+
Sbjct: 616 NKMSIAGITPNEHTYTIIMRGYAATGDIAKAFEYFTKIK-EGGLKLDVYIYETLLRACCK 674
Query: 276 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
+ + +A + T + + I + ++ Y+ LI +A G+ + + K ++
Sbjct: 675 SGRMQSALAVTREMSSQKIARNTFV-YNILIDGWARRGDVWEAADLMKQMKEDGVPPNIH 733
Query: 336 NYICILSSYLMLGHLKEVGEIIDQ 359
Y +++ G ++ +ID+
Sbjct: 734 TYTSYINACCKAGDMQRAQTVIDE 757
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 110/236 (46%), Gaps = 37/236 (15%)
Query: 159 TYTALLHLYAGAKWTEKAEELF-----ERVKQSNLSFNALM------------------- 194
T+T L+H Y EKA +LF +R++ +++N+L+
Sbjct: 404 TFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDM 463
Query: 195 -----------YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 243
Y+ ++ + GQVE+ ++E+ K +P+I TYN I + N+
Sbjct: 464 HAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNV 523
Query: 244 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 303
+ ++FL +M D+ D + + L++ YI ++ A + + EK + Q +TY+
Sbjct: 524 KKGQQFLQKMMQDN-ILPDLITFNTLIHGYIKEENMHGAFNVFNI-MEKEMVQPDAVTYN 581
Query: 304 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 359
+I ++ GN ++ +++K + + + Y+ +++ ++ G+ KE ++ D+
Sbjct: 582 MIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDE 637
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/339 (17%), Positives = 137/339 (40%), Gaps = 14/339 (4%)
Query: 71 SATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSD-SDYAT 129
+A ++ ++G + + +LK L K +R+ A E+ M + V D +
Sbjct: 210 AAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAM--DQCSVAPDVRSFNI 267
Query: 130 RIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSN 187
I +V + ++++ + T + +++ L+ L++ + A +K
Sbjct: 268 LIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLG 327
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 247
L + ++Y ++ + G + + V +E+ +PD+ TYN ++ + +
Sbjct: 328 LVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAE 387
Query: 248 KFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR---QWITYDF 304
+ L+EM + G + D + L++ Y + A L + + QR + Y+
Sbjct: 388 ELLNEMK-ERGVTPDLCTFTTLIHGYCRDGNFEKA----LQLFDTLLHQRLRPDVVAYNS 442
Query: 305 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
LI G+ K +++W + + Y ++ S+ G ++E +D+
Sbjct: 443 LIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKG 502
Query: 365 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
+I N ++ + G +K +F ++Q N P
Sbjct: 503 NLP-NIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILP 540
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 42/85 (49%)
Query: 170 AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFT 229
A W AEE + V S+ NA N M+ Y + +K V+ E++++ V PD+ T
Sbjct: 135 AGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVT 194
Query: 230 YNLWISSCAATLNIDQVKKFLDEMS 254
+N+ I + ++D +D M+
Sbjct: 195 HNVLIDARFRAGDVDAAIALVDSMA 219
>gi|115479233|ref|NP_001063210.1| Os09g0423300 [Oryza sativa Japonica Group]
gi|50725891|dbj|BAD33419.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|50726131|dbj|BAD33652.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113631443|dbj|BAF25124.1| Os09g0423300 [Oryza sativa Japonica Group]
gi|125605742|gb|EAZ44778.1| hypothetical protein OsJ_29409 [Oryza sativa Japonica Group]
Length = 962
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 4/122 (3%)
Query: 149 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 208
G P+S E Y +L Y A E+ + ++++++ F+ YN M+ +Y G +
Sbjct: 816 GFPVSL---EAYNCMLDAYGKAGQLEEFAAVLQKMERAGCEFDHYTYNIMINIYGRKGWI 872
Query: 209 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268
E VA V+ E+K + PD+++YN I + + K + EM G + D V Y N
Sbjct: 873 EGVANVLAELKSRGGEPDLYSYNTLIKAYGIAGMPEDAVKLMQEMRI-KGIAADRVTYTN 931
Query: 269 LV 270
L+
Sbjct: 932 LI 933
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 117/281 (41%), Gaps = 42/281 (14%)
Query: 145 RYFEGLPLSAKTS--ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY 202
R + +P SA Y +++ +++ + AE L+ +K S+ + + Y+ ++ +Y
Sbjct: 597 RIYNQMPKSATHPNLRIYCSMIDVFSIMERFTDAEALYLELKASSCVLDMIAYSVIVRMY 656
Query: 203 MSVGQVEKVALVVEEI-KRKNVVPDIF--------------------------------- 228
G+ E LV+E++ K+K +VPD +
Sbjct: 657 TKAGRPEDACLVLEDMEKQKEIVPDKYLFLDMLRTYQKCGLLEKLSDTYYWILKSQVELD 716
Query: 229 --TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESST 286
YN I+ C + +D++ + DEM G + V L++IY A AE
Sbjct: 717 EAMYNCIINCCGRAIPVDELSRIFDEM-IQQGHLANTVTLNVLLDIYGKAGLFNKAEKVF 775
Query: 287 LVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLM 346
L+ ++ + I+Y+ +I +A G+ + + ++ ++ Y C+L +Y
Sbjct: 776 LMARKQGMA--DIISYNTIIAAHAKNGDFRSMIYFVQRMQEAGFPVSLEAYNCMLDAYGK 833
Query: 347 LGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 387
G L+E ++ Q + A +FD N ++ + G E
Sbjct: 834 AGQLEEFAAVL-QKMERAGCEFDHYTYNIMINIYGRKGWIE 873
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 44/234 (18%), Positives = 100/234 (42%), Gaps = 8/234 (3%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
E + L+ Y E+AE + + + ++ N + YN ++T Y V ++K V +
Sbjct: 368 ENWLVRLNAYCQQGKMEEAELVLKSLVDEGIALNVVAYNTVITGYGKVSDMQKAMEVFDR 427
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
+K + PD TY I Q + ++ +SG + + ++N + A
Sbjct: 428 LKSAGLAPDETTYRSMIEGFGRADKYKQAILYYRKLR-NSGFKPNASNFYTMIN--LLAR 484
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
H + ++ ++E ++ + L+ Y +G K+ QI K+ K + +
Sbjct: 485 HDDSEGATEILEDMRAAGCQCSSIVTVLVRAYGSVGRMHKVLQILKACFYKKILFDATSC 544
Query: 338 ICILSSYLMLGHLKEVGEII--DQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
+++ ++ ++E ++ +WK SDF+ + + L+ + + G + A
Sbjct: 545 SILVTGFVQNSLVEEAMRVLREKKWKD---SDFEDNLYHILICSCKEAGCCDDA 595
>gi|302791627|ref|XP_002977580.1| hypothetical protein SELMODRAFT_107283 [Selaginella moellendorffii]
gi|300154950|gb|EFJ21584.1| hypothetical protein SELMODRAFT_107283 [Selaginella moellendorffii]
Length = 555
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 95/211 (45%), Gaps = 10/211 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY+A++ LY A T +A +L++ ++++N + + + + +Y VG + + + ++
Sbjct: 97 TYSAMIDLYGKAGRTAEAMDLYQTMRKNNWKPDLVSFGVIANVYSRVGDYQAILRLFRDM 156
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
++ + P++ +N I + + K DEM+ G + L+++Y
Sbjct: 157 EQAEIKPNVVLFNTLIGTLGRAGKVTLAKGMFDEMAT-YGLEPSEITLSILIDMYTKVGA 215
Query: 279 LVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 334
L A ++ +I Q++W + Y+ L+ GN + + + + M KQ
Sbjct: 216 LDKA-----LDVYDTIKQKKWKLDVLVYNTLLKSCVESGNIQRAESLIAEMEMEKQWPDH 270
Query: 335 RNYICILSSYLMLGHLKEVGEIIDQWKQSAT 365
Y +++ Y G + EV + D+ K A
Sbjct: 271 MTYGILMNVYATKGMVAEVRAMFDKLKNLAV 301
Score = 41.2 bits (95), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 38/199 (19%), Positives = 86/199 (43%), Gaps = 8/199 (4%)
Query: 173 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 232
E A F R++++ +SF+ + Y+ M+ LY G+ + + + +++ N PD+ ++ +
Sbjct: 76 AEDAIAWFHRLRETGVSFDGVTYSAMIDLYGKAGRTAEAMDLYQTMRKNNWKPDLVSFGV 135
Query: 233 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 292
+ + + + + +M + + V + L+ A + A+ A
Sbjct: 136 IANVYSRVGDYQAILRLFRDME-QAEIKPNVVLFNTLIGTLGRAGKVTLAKGMFDEMATY 194
Query: 293 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 352
+ + IT LI +Y +G DK ++ +++ K K+ Y +L S + G+++
Sbjct: 195 GLEPSE-ITLSILIDMYTKVGALDKALDVYDTIKQKKWKLDVLVYNTLLKSCVESGNIQR 253
Query: 353 VGEII------DQWKQSAT 365
+I QW T
Sbjct: 254 AESLIAEMEMEKQWPDHMT 272
>gi|225464410|ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic [Vitis vinifera]
Length = 929
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 93/207 (44%), Gaps = 6/207 (2%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y +++ + A +AE L +++ + +Y+ MM Y +G EK +V + +K
Sbjct: 397 YGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLK 456
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLD--EMSCDSGGSDDWVKYVNLVNIYITAS 277
P + +Y I+ + I +V K L+ +M +G + Y L+N ++
Sbjct: 457 ECGFTPSVISYGCLIN---LYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLK 513
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
NA + + K + + Y+ +I + G+GN D+ + K ++ + + T+R +
Sbjct: 514 DWANA-FAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTF 572
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSA 364
+ I+ + G ++ EI D + S
Sbjct: 573 MPIIHGFARSGDMRRALEIFDMMRWSG 599
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 2/187 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT ++H YA T KA E F ++K L + Y ++ G+++ V E+
Sbjct: 641 TYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREM 700
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + + F YN+ I A ++ + + + +M G D Y + +N A
Sbjct: 701 SSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMK-QEGVQPDIHTYTSFINACCKAGD 759
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ A + T+ E E + TY LI +A +K + ++ ++ K Y
Sbjct: 760 MQRA-TKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYH 818
Query: 339 CILSSYL 345
C+++S L
Sbjct: 819 CLMTSLL 825
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 108/259 (41%), Gaps = 14/259 (5%)
Query: 134 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 193
+ + FG+ R F+ P YT L+ + A + LF ++++ N
Sbjct: 184 LKEAFGVIEMMRKFKFRP----AFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVH 239
Query: 194 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
++ ++ ++ G+++ +++E+K + D+ YN+ I +D KF EM
Sbjct: 240 LFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEM 299
Query: 254 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 313
DD V Y L+ + A L E+ L E E + + Y + ++ G G
Sbjct: 300 KAQGLVPDD-VTYTTLIGVLCKARRL--DEAVELFE-ELDLNRSVPCVYAYNTMI-MGYG 354
Query: 314 NKDKIDQIWKSLRMTKQKMTSRNYI---CILSSYLMLGHLKEVGEIIDQWKQSATSDFDI 370
+ K D+ + L K+K + I CIL+ G ++E I D+ +Q A ++
Sbjct: 355 SAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAAP--NL 412
Query: 371 SACNRLLGAFSDVGLTEKA 389
+ N L+ G E A
Sbjct: 413 TTYNILIDMLCKAGELEAA 431
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 65/325 (20%), Positives = 129/325 (39%), Gaps = 11/325 (3%)
Query: 83 GNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHS 142
G +A V +++ + R AL + + M ++ F Y ID KV +
Sbjct: 233 GYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSN-SFTADLVLYNVCIDCFGKVGKVDM 291
Query: 143 GERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMT 200
++F + + TYT L+ + A+ ++A ELFE + + YN M+
Sbjct: 292 AWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIM 351
Query: 201 LYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGS 260
Y S G+ ++ ++E KRK +P + YN ++ +++ + DEM D+ +
Sbjct: 352 GYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDA--A 409
Query: 261 DDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQ 320
+ Y L+++ A L A E + +T + +I D+
Sbjct: 410 PNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFP-NIMTVNIMIDRLCKAQKLDEACS 468
Query: 321 IWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSD--FDISACNRLLG 378
I+ L SR + ++ LG V + +++ SD ++ L+
Sbjct: 469 IFLGLDHKVCSPDSRTFCSLIDG---LGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQ 525
Query: 379 AFSDVGLTEKANEFHMLLLQKNCAP 403
F G E ++ + ++ + C+P
Sbjct: 526 NFFKCGRKEDGHKIYKEMVHRGCSP 550
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 58/124 (46%), Gaps = 2/124 (1%)
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNL 188
+D + K + G FE + + +Y+ L+H A ++ + +LF +K+ L
Sbjct: 559 MDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGL 618
Query: 189 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 248
+ L YN ++ + G+V+K ++EE+K K + P + TY + A +D+
Sbjct: 619 HLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYM 678
Query: 249 FLDE 252
+E
Sbjct: 679 LFEE 682
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 88/211 (41%), Gaps = 8/211 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
YT+L+ + E ++++ + S + ++ N M G+VEK + EEI
Sbjct: 519 VYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEI 578
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K + +VPD+ +Y++ I + K EM + G D + Y +++ + +
Sbjct: 579 KAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMK-EQGLHLDVLAYNTVIDGFCKSGK 637
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN-- 336
V+ L E + Q +TY ++ GL D++D+ + K N
Sbjct: 638 -VDKAYQLLEEMKTKGLQPTVVTYGSVV---DGLAKIDRLDEAYMLFEEAKSIGVDLNVV 693
Query: 337 -YICILSSYLMLGHLKEVGEIIDQWKQSATS 366
Y ++ + +G + E I+++ Q +
Sbjct: 694 IYSSLIDGFGKVGRIDEAYLILEELMQKGLT 724
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 51/98 (52%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
T TY +++ A ++A LFE K + N ++Y+ ++ + VG++++ L++
Sbjct: 656 TVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLIL 715
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
EE+ +K + P+ +T+N + + ID+ + M
Sbjct: 716 EELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNM 753
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 90/213 (42%), Gaps = 4/213 (1%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
A +++ ++G Q TV ++ L K R A + E L+ Y++ I
Sbjct: 641 AYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEE-AKSIGVDLNVVIYSSLI 699
Query: 132 DLMTKVFGIHSGERYFEGLPLSAKTSETYT--ALLHLYAGAKWTEKAEELFERVKQSNLS 189
D KV I E L T +YT LL A+ ++A+ F+ +K S
Sbjct: 700 DGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCS 759
Query: 190 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 249
NA+ Y+ M+ + + K + +E++++ + P+ TY I+ A N+ + +
Sbjct: 760 PNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGL 819
Query: 250 LDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 282
D SGG D Y ++ +A+ ++A
Sbjct: 820 FDRFKA-SGGVPDSACYNAMIEGLSSANKAMDA 851
>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06710, mitochondrial; Flags: Precursor
gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
Length = 987
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 130/340 (38%), Gaps = 54/340 (15%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
A +VI+ + +G S +L L + + + A + E M V Y +
Sbjct: 467 AFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM-KRGGLVADVYTYTIMV 525
Query: 132 DLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLS 189
D K I ++F + T TYTAL+H Y AK A ELFE +
Sbjct: 526 DSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCL 585
Query: 190 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPD----------------IFTYNLW 233
N + Y+ ++ + GQVEK + E + VPD + TY
Sbjct: 586 PNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGAL 645
Query: 234 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAE---------- 283
+ + +++ +K LD MS + G + + Y L++ L A+
Sbjct: 646 LDGFCKSHRVEEARKLLDAMSME-GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704
Query: 284 -SSTLVEAEKSI-----TQRQWITYDFL-----------IILYA----GLGNKDKIDQIW 322
+TL I +RQ + L +++Y GL K D+ +
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 764
Query: 323 KSLRMTKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQ 359
K ++M ++K N Y ++ + M+G ++ E++++
Sbjct: 765 KLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLER 804
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 44/94 (46%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
YT ++ T++A +L + +++ N + Y M+ + +G++E ++E +
Sbjct: 747 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG 806
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
K V P+ TY + I C +D L+EM
Sbjct: 807 SKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840
>gi|297834714|ref|XP_002885239.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
gi|297331079|gb|EFH61498.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
Length = 1429
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/274 (20%), Positives = 119/274 (43%), Gaps = 16/274 (5%)
Query: 85 QATVSELRHILKELRKSQRYKHALEISEWM-VTHKEFVLSDSDYATRIDLMTKVFGIHSG 143
Q T ++ ++K + + + ++ ALE+ EW+ + H S A + + V G +
Sbjct: 153 QMTPTDYCFVVKSVGQ-ESWQRALEVFEWLNLRHWH-----SPNARMVAAILGVLGRWNQ 206
Query: 144 ER-----YFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEM 198
E + P + Y A++ +Y+ + KA+EL + ++Q + + +N +
Sbjct: 207 ESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELLDAMRQRGCVPDLISFNTL 266
Query: 199 MTLYMSVGQVEK--VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCD 256
+ + G + V +++ ++ + PD TYN +S+C+ N++ K ++M
Sbjct: 267 INARLKSGGLTPNLVVELLDMVRNSGLRPDAITYNTLLSACSRDSNLEGAVKVFEDMEAH 326
Query: 257 SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKD 316
D W Y ++++Y AE +E E +TY+ L+ +A N +
Sbjct: 327 RCQPDLWT-YNAMISVYGRCGLAAEAE-RLFIELELKGFSPDAVTYNSLLYAFARERNTE 384
Query: 317 KIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 350
K+ ++++ ++ Y I+ Y G L
Sbjct: 385 KVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQL 418
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 1/187 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY A++ +Y +AE LF ++ S +A+ YN ++ + EKV V +++
Sbjct: 334 TYNAMISVYGRCGLAAEAERLFIELELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQM 393
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
++ D TYN I +D + +M SG + D + Y L++ A+
Sbjct: 394 QKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANR 453
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
V A ++ + E + TY LI YA G +++ + + + + K + Y
Sbjct: 454 SVEA-AALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYS 512
Query: 339 CILSSYL 345
+L L
Sbjct: 513 VMLDVLL 519
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/223 (19%), Positives = 104/223 (46%), Gaps = 3/223 (1%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
+ ++L +Y + +K ++++R+K+S L + YN ++ +Y + E+ ++++++
Sbjct: 930 WNSMLKMYTVIEDYKKTVQVYQRIKESGLEPDETTYNTLIIMYCRDRRPEEGYSLMQQMR 989
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
+ P + TY IS+ ++Q ++ +E+ G D Y ++ I +
Sbjct: 990 NLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEEL-LSKGLKLDRSFYHTMMKISRDSGSD 1048
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 339
AE L + + + T L++ Y+ GN + +++ +L+ T+ ++T+ Y
Sbjct: 1049 SKAEK-LLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKNTEVELTTLPYSS 1107
Query: 340 ILSSYLMLGHLKE-VGEIIDQWKQSATSDFDISACNRLLGAFS 381
++ +YL K + +++ K+ D I C +FS
Sbjct: 1108 VIDAYLRSKDYKSGIERLLEMKKEGLEPDHRIWTCFVRAASFS 1150
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 92/197 (46%), Gaps = 7/197 (3%)
Query: 170 AKWTEK--AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 227
+W ++ A E+F R + + +YN MM +Y G+ K +++ ++++ VPD+
Sbjct: 202 GRWNQESLAVEIFTRA-EPTVGDRVQVYNAMMGVYSRSGKFSKAQELLDAMRQRGCVPDL 260
Query: 228 FTYNLWISS--CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESS 285
++N I++ + L + V + LD M +SG D + Y L++ S+L A
Sbjct: 261 ISFNTLINARLKSGGLTPNLVVELLD-MVRNSGLRPDAITYNTLLSACSRDSNLEGA-VK 318
Query: 286 TLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYL 345
+ E Q TY+ +I +Y G + ++++ L + + Y +L ++
Sbjct: 319 VFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFIELELKGFSPDAVTYNSLLYAFA 378
Query: 346 MLGHLKEVGEIIDQWKQ 362
+ ++V E+ Q ++
Sbjct: 379 RERNTEKVKEVYQQMQK 395
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 48/96 (50%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
+TY +L+ + K E+AE+LFE + L + Y+ MM + G K +++
Sbjct: 998 DTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQM 1057
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
+K + P + T +L + S +++ N + +K L +
Sbjct: 1058 MKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNL 1093
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 98/239 (41%), Gaps = 24/239 (10%)
Query: 178 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 237
EL + V+ S L +A+ YN +++ +E V E+++ PD++TYN IS
Sbjct: 283 ELLDMVRNSGLRPDAITYNTLLSACSRDSNLEGAVKVFEDMEAHRCQPDLWTYNAMISVY 342
Query: 238 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV--EAEKSIT 295
+ ++ E+ G S D V Y +L+ + N E V + +K
Sbjct: 343 GRCGLAAEAERLFIELEL-KGFSPDAVTYNSLLYAFARER---NTEKVKEVYQQMQKMGF 398
Query: 296 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLM--LGHLKE- 352
+ +TY+ +I +Y G D Q++K ++ ++ RN I + L+ LG
Sbjct: 399 GKDEMTYNTIIHMYGKQGQLDLALQLYKDMK----GLSGRNPDAITYTVLIDSLGKANRS 454
Query: 353 ------VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 405
+ E++D + + C ++ G E+A + +L+ P N
Sbjct: 455 VEAAALMSEMLDVGIKPTLQTYSALIC-----GYAKAGKREEAEDTFSCMLRSGTKPDN 508
>gi|242084242|ref|XP_002442546.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
gi|241943239|gb|EES16384.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
Length = 735
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/309 (19%), Positives = 127/309 (41%), Gaps = 25/309 (8%)
Query: 103 RYKHALEISEWMVTHKEFVLSDS---DYATRIDLMTKVFGIHSGERYFEGLPLSAKTSET 159
+Y+HA E+ + M+ +LS + D A R+ + G+ G R F L LS
Sbjct: 121 KYRHAPEVFDEMLV----LLSRTRLHDPARRVMRLMIRRGMPRGTRQFAHLMLS------ 170
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y+ A A + + +++ + + + N + + + G+++K E ++
Sbjct: 171 -------YSRAGKLRSAMRVLQLMQKDGCAPDICICNMAVNVLVVAGRIDKALEFAERMR 223
Query: 220 RKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
R V PD+ TYN I C A +D ++ + +G D + Y +++
Sbjct: 224 RVGVDPDVVTYNCLIKGLCGARRIVDALEMISSMLQ--NGCLPDKISYFTVMSFLCKEKR 281
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ + ++ ++ I Q +TY+ LI A G+ D+ + + ++ Y
Sbjct: 282 VADVQNLLERMSDAGIFPDQ-VTYNMLIHGLAKHGHADEALSFLRESEGKRFRVDEVGYS 340
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
+ S+ + G + E EII + D+ + ++ F +G ++A + + +
Sbjct: 341 ATVHSFCLNGRMAEAKEIIGEMISKGCRP-DVVTYSAVVDGFCRIGELDQARKMMKHMYK 399
Query: 399 KNCAPTNAS 407
C P +
Sbjct: 400 NGCKPNTVT 408
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 104/254 (40%), Gaps = 19/254 (7%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+ GA+ A E+ + Q+ + + Y +M+ +V V ++E +
Sbjct: 233 TYNCLIKGLCGARRIVDALEMISSMLQNGCLPDKISYFTVMSFLCKEKRVADVQNLLERM 292
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD---DWVKYVNLVNIYIT 275
+ PD TYN+ I A + D+ FL E S G D V Y V+ +
Sbjct: 293 SDAGIFPDQVTYNMLIHGLAKHGHADEALSFLRE----SEGKRFRVDEVGYSATVHSFCL 348
Query: 276 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
+ A+ + E + +TY ++ + +G D+ ++ K + K +
Sbjct: 349 NGRMAEAK-EIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTV 407
Query: 336 NYICILSSYLMLGHLKEVGEIIDQ-----WKQSATSDFDISACNRLLGAFSDVGLTEKAN 390
+ +L+ +G E E++++ W SA + + + ++ F G +++
Sbjct: 408 THTALLNGLCKVGKSSEAWELLNKSEEEWWTPSAIT-YSV-----VMHGFRREGKLKESC 461
Query: 391 EFHMLLLQKNCAPT 404
+ M +LQK PT
Sbjct: 462 DVVMQMLQKGFFPT 475
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 106/248 (42%), Gaps = 9/248 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+T L+ +A+++ E ++ + L YN +M VGQ+E + E +
Sbjct: 1192 TFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESL 1251
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + ++F+YN+ I+ ID+ +F +EM G V Y L+ + S
Sbjct: 1252 ADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMR-PKGLKPSTVTYNTLIGA-LCQSG 1309
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGL---GNKDKIDQIWKSLRMTKQKMTSR 335
V VE + T Q++ +L GL G+ ++ +++S++ T+ K
Sbjct: 1310 RVRTAQKLFVEMQ---TCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIE 1366
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 395
+ +L G L+E + D+ ++ D A N L+ + G+ +A +
Sbjct: 1367 VFSILLDGMCRAGKLEEAWKQFDEISKNGLEP-DTIAYNILINGLCNKGMLSEAVKLLWQ 1425
Query: 396 LLQKNCAP 403
+ +K C P
Sbjct: 1426 MEEKGCLP 1433
>gi|302762967|ref|XP_002964905.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
gi|300167138|gb|EFJ33743.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
Length = 773
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/311 (18%), Positives = 123/311 (39%), Gaps = 45/311 (14%)
Query: 95 LKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRID--LMTKVFGIHSGERYFEGLPL 152
L +L +++ +T ++F L ++A R D ++F +Y +
Sbjct: 24 LSQLPPRGSVTRCMDLYRSKLTMQDFSLIFREFAARSDWHRALRLF------KYMQRQQW 77
Query: 153 SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVA 212
T YT ++ + EK E+FE + ++++ +N + ++ Y GQ E
Sbjct: 78 CKPTEHIYTIMIGIMGREGLLEKCSEIFEDMPENDVKWNVYAFTALINAYGRNGQYEASL 137
Query: 213 LVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 272
++ +K++ V P++ TYN +++C S G DW L+N+
Sbjct: 138 HLLARMKKEQVEPNLITYNTVLNAC-------------------SKGGLDW---EGLLNL 175
Query: 273 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 332
+ H Q ITY+ L+ + G ++ ++K++ +
Sbjct: 176 FAQMRH--------------EGIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNESGVVA 221
Query: 333 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
+ Y ++ ++ L V E++ + + DI+ N L+ A++D G A
Sbjct: 222 DAVTYKSLVDTFAGSNQLGRVEELLREMEDEGNPP-DIAGYNSLIEAYADAGNVHGAAGV 280
Query: 393 HMLLLQKNCAP 403
+ + CAP
Sbjct: 281 FKQMQRGGCAP 291
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 107/281 (38%), Gaps = 4/281 (1%)
Query: 125 SDYATRIDLMTKVFGIHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFER 182
+ Y + I+ +H F+ + A ETY+ LL +Y E+ LF
Sbjct: 259 AGYNSLIEAYADAGNVHGAAGVFKQMQRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSD 318
Query: 183 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 242
+K + YN ++ ++ G ++ + ++ V PD TY+ +S C
Sbjct: 319 MKDLSTPPTVATYNSLIQVFGEGGYFQESINLFHDMVDSGVKPDDATYSALLSVCGRGGL 378
Query: 243 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 302
+ K M + + L++ Y + +A S E + Q Y
Sbjct: 379 TREAAKIHQHMLTNE-STPSLEASAGLISSYGKMAMYKDALVSYYRIREAGLDP-QVSAY 436
Query: 303 DFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ 362
D LI YA G + ++ + + ++ +Y +G E E + +Q
Sbjct: 437 DALIQGYAKGGLYVEAGSTLYAMNKAGFQAPVSSVNSVMEAYSKVGLHDEALEFFSELQQ 496
Query: 363 SATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
S+ D LLG + D+GL E+A E +++ + + P
Sbjct: 497 KEGSEVDERTHETLLGVYCDMGLLEEAKEEFVIIKETSKVP 537
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 102/286 (35%), Gaps = 58/286 (20%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +L+ +AG+ + EEL ++ + YN ++ Y G V A V +++
Sbjct: 225 TYKSLVDTFAGSNQLGRVEELLREMEDEGNPPDIAGYNSLIEAYADAGNVHGAAGVFKQM 284
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS------------------------ 254
+R PD+ TY+ + +QV+ +M
Sbjct: 285 QRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKDLSTPPTVATYNSLIQVFGEGGYF 344
Query: 255 ----------CDSGGSDDWVKYVNLVNIYITAS----------HLVNAESSTLVEAEKSI 294
DSG D Y L+++ H++ ES+ +EA
Sbjct: 345 QESINLFHDMVDSGVKPDDATYSALLSVCGRGGLTREAAKIHQHMLTNESTPSLEASAG- 403
Query: 295 TQRQWITYDFLIILYAGLGN-KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 353
LI Y + KD + ++ +R Y ++ Y G E
Sbjct: 404 ----------LISSYGKMAMYKDALVSYYR-IREAGLDPQVSAYDALIQGYAKGGLYVEA 452
Query: 354 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 399
G + + A +S+ N ++ A+S VGL ++A EF L QK
Sbjct: 453 GSTLYAMNK-AGFQAPVSSVNSVMEAYSKVGLHDEALEFFSELQQK 497
>gi|302761794|ref|XP_002964319.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
gi|300168048|gb|EFJ34652.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
Length = 384
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 105/240 (43%), Gaps = 10/240 (4%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKE-LRKSQRYKHALEISEWMVTHKEFVLSDSD--YA 128
A ++ R + +G +ATV I+ LR+ + HAL + E M KE + Y
Sbjct: 1 ACSLFYRMMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVM---KESGKKPDEILYN 57
Query: 129 TRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQS 186
++ + + + E+ + + ++ TYT L+ YA A + +LF+ +K
Sbjct: 58 CLVNGLVNSGRLEAAEKILDDMKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDK 117
Query: 187 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 246
S N+ YN ++ Y G ++ + +E+ D+ TYN+ I+ ++ +
Sbjct: 118 GESPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDM 177
Query: 247 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI 306
++ LDEM G D V Y L+++Y S+ V A E W TY+ ++
Sbjct: 178 ERLLDEMDT-KGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIW-TYNIML 235
>gi|449477018|ref|XP_004154904.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 567
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 104/236 (44%), Gaps = 3/236 (1%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
+ + +L +YA T+ A +F+ + + + N +++ + G+ K LV
Sbjct: 185 SPTVFDMILKVYAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVY 244
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275
E++ ++PDIF+Y + +++ +D+ F+ EM S + V Y +L++ Y++
Sbjct: 245 EQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEME-RSCCEPNVVTYNSLIDGYVS 303
Query: 276 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
+ A+ + +EK I + TY LI Y G ++ ++++ + +
Sbjct: 304 LGDVCGAKKVLALMSEKGIPENSR-TYTLLIKGYCKRGQMEQAEKLFGCMMEKNLFVDEH 362
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 391
Y ++ +Y G + + I D + + CN L+ + +G KA E
Sbjct: 363 VYGVLIHAYCTAGRVDDALRIRDAMLKVGLK-MNTVICNSLINGYCKLGHVNKAAE 417
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 72/166 (43%), Gaps = 2/166 (1%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
Y L+H Y A + A + + + + L N ++ N ++ Y +G V K A V+
Sbjct: 362 HVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVS 421
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
+K N+ PD + YN + + + K DEM + G + V Y L+
Sbjct: 422 MKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMH-NKGVNFTVVTYNTLLKNLFHVG 480
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 323
H+ +A + ++ + + +TY L+ + +G D+ IWK
Sbjct: 481 HVEHALHIWNLMHKRGVAPNE-VTYCTLLDAFFKVGTFDRAMMIWK 525
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 102/249 (40%), Gaps = 3/249 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+YT +++ Y ++A + +++S N + YN ++ Y+S+G V V+ +
Sbjct: 258 SYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALM 317
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K + + TY L I ++Q +K M + D+ V Y L++ Y TA
Sbjct: 318 SEKGIPENSRTYTLLIKGYCKRGQMEQAEKLFGCMMEKNLFVDEHV-YGVLIHAYCTAGR 376
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ +A + + I + LI Y LG+ +K ++ S++ K S Y
Sbjct: 377 VDDALRIRDAMLKVGLKMNTVIC-NSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYN 435
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
+L + + ++ D+ +F + N LL VG E A L+ +
Sbjct: 436 TLLDGFCKQEDFIKAFKLCDEMHNKGV-NFTVVTYNTLLKNLFHVGHVEHALHIWNLMHK 494
Query: 399 KNCAPTNAS 407
+ AP +
Sbjct: 495 RGVAPNEVT 503
>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 997
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 130/340 (38%), Gaps = 54/340 (15%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
A +VI+ + +G S +L L + + + A + E M V Y +
Sbjct: 467 AFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM-KRGGLVADVYTYTIMV 525
Query: 132 DLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLS 189
D K I ++F + T TYTAL+H Y AK A ELFE +
Sbjct: 526 DSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCL 585
Query: 190 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPD----------------IFTYNLW 233
N + Y+ ++ + GQVEK + E + VPD + TY
Sbjct: 586 PNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGAL 645
Query: 234 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAE---------- 283
+ + +++ +K LD MS + G + + Y L++ L A+
Sbjct: 646 LDGFCKSHRVEEARKLLDAMSME-GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704
Query: 284 -SSTLVEAEKSI-----TQRQWITYDFL-----------IILYA----GLGNKDKIDQIW 322
+TL I +RQ + L +++Y GL K D+ +
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 764
Query: 323 KSLRMTKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQ 359
K ++M ++K N Y ++ + M+G ++ E++++
Sbjct: 765 KLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLER 804
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 44/94 (46%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
YT ++ T++A +L + +++ N + Y M+ + +G++E ++E +
Sbjct: 747 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG 806
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
K V P+ TY + I C +D L+EM
Sbjct: 807 SKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 2/126 (1%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPL--SAKTSETYTALLHLYAGAKWTEKAEELFERVK 184
Y T ID + K I E F+ + L +++S TY L+ K E+A +L +++
Sbjct: 441 YNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMI 500
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
L + YN ++T + VG +EK +V+ + PDIFTY I +D
Sbjct: 501 MEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVD 560
Query: 245 QVKKFL 250
K L
Sbjct: 561 VASKLL 566
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 99/248 (39%), Gaps = 9/248 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +L+ EKA E+ +++ S N + YN +++ ++E + +
Sbjct: 300 TYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARIL 359
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K ++PD+ T+N I + N D + +EM + G D Y L++
Sbjct: 360 VSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMK-NKGCKPDEFTYSILIDSLCYERR 418
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKI---DQIWKSLRMTKQKMTSR 335
L A L E E S R + Y+ LI GL +I ++I+ + + +S
Sbjct: 419 LKEA-LMLLKEMESSGCARNAVVYNTLI---DGLCKSRRIEDAEEIFDQMELLGVSRSSV 474
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 395
Y ++ ++E +++DQ D N LL F VG EKA +
Sbjct: 475 TYNTLIDGLCKNKRVEEASQLMDQMIMEGLKP-DKFTYNSLLTYFCRVGDIEKAGDIVQT 533
Query: 396 LLQKNCAP 403
+ C P
Sbjct: 534 MASNGCEP 541
Score = 41.6 bits (96), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 95/208 (45%), Gaps = 16/208 (7%)
Query: 71 SATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATR 130
+AT++ + VS+G V +++ L S+ A+E+ E M +K + Y+
Sbjct: 351 AATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEM-KNKGCKPDEFTYSIL 409
Query: 131 IDLMTKVFGIHSGERYFEGLPL--------SAKTSETYTALLHLYAGAKWTEKAEELFER 182
ID + R E L L A+ + Y L+ ++ E AEE+F++
Sbjct: 410 ID------SLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQ 463
Query: 183 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 242
++ +S +++ YN ++ +VE+ + +++++ + + PD FTYN ++ +
Sbjct: 464 MELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGD 523
Query: 243 IDQVKKFLDEMSCDSGGSDDWVKYVNLV 270
I++ + M+ +G D Y L+
Sbjct: 524 IEKAGDIVQTMA-SNGCEPDIFTYGTLI 550
>gi|356540361|ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 100/248 (40%), Gaps = 12/248 (4%)
Query: 83 GNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHS 142
G + T+++ +L L K++ K A + + F+L+ Y+ I +
Sbjct: 177 GIKPTINDFDKLLFILCKTKHVKQAQQFFDQ--AKNRFLLTAKTYSILISGWGDIGDSEK 234
Query: 143 GERYFE-----GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 197
F+ G P+ Y LL ++A+ +F + + +A Y+
Sbjct: 235 AHELFQAMLEQGCPVDLLA---YNNLLQALCKGGCVDEAKTIFHDMLSKRVEPDAFTYSI 291
Query: 198 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 257
+ Y V+ V+++++R N++P++FTYN I ++++ LDEM
Sbjct: 292 FIHSYCDADDVQSALRVLDKMRRYNILPNVFTYNCIIKRLCKNEHVEEAYLLLDEMISRG 351
Query: 258 GGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 317
D W N + Y VN + EK TY+ ++ L +G DK
Sbjct: 352 VRPDTWS--YNAIQAYHCDHCEVNRAIRLMFRMEKDNCLPDRHTYNMVLKLLIRIGRFDK 409
Query: 318 IDQIWKSL 325
+ ++W ++
Sbjct: 410 VTKVWGNM 417
>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
Length = 946
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 130/340 (38%), Gaps = 54/340 (15%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
A +VI+ + +G S +L L + + + A + E M V Y +
Sbjct: 426 AFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM-KRGGLVADVYTYTIMV 484
Query: 132 DLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLS 189
D K I ++F + T TYTAL+H Y AK A ELFE +
Sbjct: 485 DSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCL 544
Query: 190 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPD----------------IFTYNLW 233
N + Y+ ++ + GQVEK + E + VPD + TY
Sbjct: 545 PNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGAL 604
Query: 234 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAE---------- 283
+ + +++ +K LD MS + G + + Y L++ L A+
Sbjct: 605 LDGFCKSHRVEEARKLLDAMSME-GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 663
Query: 284 -SSTLVEAEKSI-----TQRQWITYDFL-----------IILYA----GLGNKDKIDQIW 322
+TL I +RQ + L +++Y GL K D+ +
Sbjct: 664 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 723
Query: 323 KSLRMTKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQ 359
K ++M ++K N Y ++ + M+G ++ E++++
Sbjct: 724 KLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLER 763
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 44/94 (46%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
YT ++ T++A +L + +++ N + Y M+ + +G++E ++E +
Sbjct: 706 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG 765
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
K V P+ TY + I C +D L+EM
Sbjct: 766 SKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 799
>gi|7529747|emb|CAB86932.1| putative protein [Arabidopsis thaliana]
gi|24030379|gb|AAN41351.1| unknown protein [Arabidopsis thaliana]
Length = 526
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 140/331 (42%), Gaps = 20/331 (6%)
Query: 71 SATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSD--YA 128
+A + +R S G + + + ILK + ++K A E+ E ++ K+ L Y
Sbjct: 135 NAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYH 194
Query: 129 TRIDLMTKVFGIHSGERYF-----EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERV 183
I + K + F +G+P +++ TY +L+ K K +++++
Sbjct: 195 MMIYMYKKAGNYEKARKVFSSMVGKGVP---QSTVTYNSLMSFETSYKEVSK---IYDQM 248
Query: 184 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 243
++S++ + + Y ++ Y + E+ V EE+ V P YN+ + + A + +
Sbjct: 249 QRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMV 308
Query: 244 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 303
+Q K M D D W Y +++ Y+ AS + AE + + +TY
Sbjct: 309 EQAKTVFKSMRRDRIFPDLW-SYTTMLSAYVNASDMEGAE-KFFKRIKVDGFEPNIVTYG 366
Query: 304 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK-- 361
LI YA + +K+ ++++ +R++ K I+ + G K G + +K
Sbjct: 367 TLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDAS---GRCKNFGSALGWYKEM 423
Query: 362 QSATSDFDISACNRLLGAFSDVGLTEKANEF 392
+S D A N LL S E+A E
Sbjct: 424 ESCGVPPDQKAKNVLLSLASTQDELEEAKEL 454
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 62/328 (18%), Positives = 138/328 (42%), Gaps = 12/328 (3%)
Query: 71 SATNVIQRWVSEGNQATVSEL-RHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYAT 129
SA V++++ ++G+Q +L L ++ +++ EI EW+ + S+ D+
Sbjct: 28 SAVPVLRQYKTDGDQGLPRDLVLGTLVRFKQLKKWNLVSEILEWLRYQNWWNFSEIDFLM 87
Query: 130 RIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSN 187
I K+ + ER L T +YTAL+ Y AE +F R++ S
Sbjct: 88 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 147
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVALVVEEI---KRKNVVPDIFTYNLWISSCAATLNID 244
+A+ Y ++ ++ + ++ V E + K+ + PD Y++ I N +
Sbjct: 148 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 207
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 304
+ +K M G V Y +L++ + + S + ++S Q ++Y
Sbjct: 208 KARKVFSSM-VGKGVPQSTVTYNSLMSFETSYKEV----SKIYDQMQRSDIQPDVVSYAL 262
Query: 305 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
LI Y +++ +++ + + T + Y +L ++ + G +++ + ++
Sbjct: 263 LIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR 322
Query: 365 TSDFDISACNRLLGAFSDVGLTEKANEF 392
D+ + +L A+ + E A +F
Sbjct: 323 IFP-DLWSYTTMLSAYVNASDMEGAEKF 349
>gi|115461420|ref|NP_001054310.1| Os04g0684500 [Oryza sativa Japonica Group]
gi|113565881|dbj|BAF16224.1| Os04g0684500 [Oryza sativa Japonica Group]
Length = 901
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 98/220 (44%), Gaps = 16/220 (7%)
Query: 152 LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 211
LS+ Y+ ++H + + E+AEEL +++ + +Y+ MM Y + K
Sbjct: 364 LSSLNGIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKC 423
Query: 212 ALVVEEIKRKNVVPDIFTY----NLW--ISSCAATLNIDQVKKFLDEM-SCDSGGSDDWV 264
+V E +K P I +Y NL+ I A L+I + EM SC G +
Sbjct: 424 LVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISK------EMESC--GIKHNNK 475
Query: 265 KYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS 324
Y L+N +I NA + E +S Q Y+ LI + +GN D+ I +
Sbjct: 476 TYSMLINGFIHLHDFANA-FAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEK 534
Query: 325 LRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
++ + + ++R + I+ Y + G +K + +D ++S
Sbjct: 535 MQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSG 574
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 87/188 (46%), Gaps = 4/188 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT ++ YA + KA E F ++K+S L + +Y ++ G+++ V E+
Sbjct: 616 TYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREM 675
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + + F YN+ I A ++ + + + +M D G + Y + +N A
Sbjct: 676 SFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKED-GVPPNIHTYTSYINACCKAGD 734
Query: 279 LVNAESSTLVEAEKSITQRQWI-TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
+ AE ++E + + + TY LI +A + D+ + ++ +++ K +Y
Sbjct: 735 MQRAEK--VIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASY 792
Query: 338 ICILSSYL 345
C+++S L
Sbjct: 793 HCLVTSLL 800
Score = 41.2 bits (95), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 91/204 (44%), Gaps = 4/204 (1%)
Query: 147 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 206
FE +P ++ + ++ YA A FE ++ + NA ++ ++ Y
Sbjct: 256 FERIPKPSRRE--FGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAR 313
Query: 207 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 266
+ VEE+K + + I TY++ IS A +N Q L + + S + + Y
Sbjct: 314 DMRGALSCVEEMKSEGLELTIVTYSILISG-FAKINDSQSADNLFKEAKTKLSSLNGIIY 372
Query: 267 VNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 326
N+++ + + ++ AE + E E+ Y ++ Y + N++K +++ L+
Sbjct: 373 SNIIHAHCQSGNMERAE-ELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLK 431
Query: 327 MTKQKMTSRNYICILSSYLMLGHL 350
K + +Y C+L+ Y+ +G +
Sbjct: 432 ECGFKPSIISYGCLLNLYVKIGKV 455
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 108/250 (43%), Gaps = 7/250 (2%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
S Y +++ L +AEE F + + + + ++Y ++ + G + +
Sbjct: 759 SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFY 818
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
E+ +++ PD+ TY IS ++ + K EM C G D V + L+N Y A
Sbjct: 819 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC-KGLEPDSVTFTELINGYCKA 877
Query: 277 SHLVNA--ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 334
H+ +A + +++A S +TY LI G+ D +++ + +
Sbjct: 878 GHMKDAFRVHNHMIQAGCS---PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 934
Query: 335 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 394
Y I++ G+++E +++ ++ ++A + D L+ A+ G +KA E
Sbjct: 935 FTYNSIVNGLCKSGNIEEAVKLVGEF-EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 993
Query: 395 LLLQKNCAPT 404
+L K PT
Sbjct: 994 EMLGKGLQPT 1003
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 42/234 (17%), Positives = 96/234 (41%), Gaps = 3/234 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y ++H ++A L ++ + + + Y+ ++ Y G+++KV ++E +
Sbjct: 691 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 750
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
KRK + P+ + Y I + + ++ EM G D V Y L++ +
Sbjct: 751 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM-IRQGILPDTVVYTTLIDGFCKRGD 809
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ A S E +TY +I + +G+ + +++ + + S +
Sbjct: 810 -IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 868
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
+++ Y GH+K+ + + Q+ S ++ L+ G + ANE
Sbjct: 869 ELINGYCKAGHMKDAFRVHNHMIQAGCSP-NVVTYTTLIDGLCKEGDLDSANEL 921
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 50/272 (18%), Positives = 104/272 (38%), Gaps = 11/272 (4%)
Query: 138 FGI-HSGERYFE-----GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFN 191
FG+ R FE GL LS + Y L L T A +F + + +N
Sbjct: 631 FGLLREARRVFEKMLNYGLVLSVDSCNVY--LTRLSKDCYKTATAIIVFREFPEVGVCWN 688
Query: 192 ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 251
YN ++ +G++++ ++ ++ K PD+ +Y+ ++ +D+V K ++
Sbjct: 689 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE 748
Query: 252 EMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAG 311
M + ++ Y +++ + L AE + E + + Y LI +
Sbjct: 749 VMKRKGLKPNSYI-YGSIIGLLCRICKLAEAEEA-FSEMIRQGILPDTVVYTTLIDGFCK 806
Query: 312 LGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDIS 371
G+ + + + Y I+S + +G + E G++ + D
Sbjct: 807 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP-DSV 865
Query: 372 ACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
L+ + G + A H ++Q C+P
Sbjct: 866 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 897
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 2/136 (1%)
Query: 147 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 206
FE L+A T TYT L+ Y + +KA+E+ + + L + +N +M + G
Sbjct: 960 FEAAGLNADTV-TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 1018
Query: 207 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 266
+E ++ + K + P+ T+N + N+ +M C G D Y
Sbjct: 1019 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM-CSRGVGPDGKTY 1077
Query: 267 VNLVNIYITASHLVNA 282
NLV + A ++ A
Sbjct: 1078 ENLVKGHCKARNMKEA 1093
>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 892
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 98/212 (46%), Gaps = 11/212 (5%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y+ L+ +A +EKA LF ++ + ++FN Y ++ L++S +++ + + +K
Sbjct: 528 YSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMK 587
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
V PD Y ++ T + + + DEMS G S + V Y +N Y+ +
Sbjct: 588 ESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMS-REGCSPNVVTYTCFINEYLKLNK- 645
Query: 280 VNAESSTLVE--AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN- 336
N ++ L E E+ + Q I Y LI + G ++ + ++ M ++ + N
Sbjct: 646 -NNQAHKLYEKMKERGVYPDQ-ILYTMLIAAFCNTGEMNRAEALFDE--MKQEGRCTPNV 701
Query: 337 --YICILSSYLMLGHLKEVGEIIDQWKQSATS 366
Y C+++SY+ L + ++ ++ + S
Sbjct: 702 VMYTCLINSYIKLNKRDQAEKLYEEMRAKGLS 733
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y+ L+ + ++A E+F+ ++ S + N Y+ ++ + G+V+K V EE+
Sbjct: 317 SYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEM 376
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K ++PD+++Y++ I ++D KF +EM+ + S Y +L+ Y +
Sbjct: 377 KNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMT-SNNFSPSAFNYCSLIKGYYKSKQ 435
Query: 279 LVNA 282
NA
Sbjct: 436 FANA 439
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/169 (20%), Positives = 80/169 (47%), Gaps = 1/169 (0%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
+TYT L++L+ + A LF+ +K+S + + + Y ++ + + G++ + + +E
Sbjct: 561 KTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDE 620
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
+ R+ P++ TY +I+ +Q K ++M + G D + Y L+ +
Sbjct: 621 MSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMK-ERGVYPDQILYTMLIAAFCNTG 679
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 326
+ AE+ ++ + Y LI Y L +D+ +++++ +R
Sbjct: 680 EMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMR 728
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 98/242 (40%), Gaps = 4/242 (1%)
Query: 163 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 222
+L +Y KA L E+ +++ + FN YNE + EK ++ + ++N
Sbjct: 461 ILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRN 520
Query: 223 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 282
V+PD+ Y+ IS A LN ++ +M+ G + + Y L+N++I+ + A
Sbjct: 521 VLPDVVNYSTLISCFAKRLNSEKAVMLFIKMT-KVGITFNVKTYTILINLFISDCKMDVA 579
Query: 283 ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILS 342
E + Q I Y L+ + G + ++ + Y C ++
Sbjct: 580 YRLFKGMKESRVYPDQ-IAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFIN 638
Query: 343 SYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE-FHMLLLQKNC 401
YL L + ++ ++ K+ D L+ AF + G +A F + + C
Sbjct: 639 EYLKLNKNNQAHKLYEKMKERGVYP-DQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRC 697
Query: 402 AP 403
P
Sbjct: 698 TP 699
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 70/159 (44%), Gaps = 2/159 (1%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 184
Y I+L + R F+G+ S + YT+L+ + +A LF+ +
Sbjct: 563 YTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMS 622
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
+ S N + Y + Y+ + + + + E++K + V PD Y + I++ T ++
Sbjct: 623 REGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMN 682
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAE 283
+ + DEM + + + V Y L+N YI + AE
Sbjct: 683 RAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAE 721
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 95/246 (38%), Gaps = 22/246 (8%)
Query: 143 GERYFEGLPLSAKTSETYTALLHLYA--GAKWTEKAEELFERVKQSNLSFNALMYNEMMT 200
G+ Y G + T TY L G W L + + + N N +N ++
Sbjct: 234 GKIYMSGETPNVVTYGTYIKGLCKVGLFGVAW-----RLIQNLCRKNQPLNNHCFNAVIY 288
Query: 201 LYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGS 260
G +++ + V +E+K ++PD+++Y++ I +DQ + EM +SG
Sbjct: 289 GLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMR-NSGIL 347
Query: 261 DDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQ 320
+ Y L++ + V+ E + S +Y LI + G+ D +
Sbjct: 348 PNIYSYSILIDGFCKEGR-VDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIK 406
Query: 321 IWKSLRMTKQKMTSRNYICILSSYL----MLGHLKE--VGEIIDQWKQSATSDFDISACN 374
W+ + ++ NY ++ Y LKE + + + W D ACN
Sbjct: 407 FWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWP-------DTIACN 459
Query: 375 RLLGAF 380
+L +
Sbjct: 460 HILSIY 465
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 75/152 (49%), Gaps = 13/152 (8%)
Query: 127 YATRIDLMTKV--FGIHSGERYFEGL-----PLSAKTSETYTALLHLYAGAKWTEKAEEL 179
Y T I + KV FG+ R + L PL+ + + A+++ ++A E+
Sbjct: 248 YGTYIKGLCKVGLFGV--AWRLIQNLCRKNQPLN---NHCFNAVIYGLCQGGILDEASEV 302
Query: 180 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 239
F+ +K S + + Y+ ++ + G+V++ + V +E++ ++P+I++Y++ I
Sbjct: 303 FKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCK 362
Query: 240 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
+D+ + +EM +SG D Y L++
Sbjct: 363 EGRVDKALEVFEEMK-NSGILPDVYSYSILID 393
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
[Arabidopsis lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 1164
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 108/250 (43%), Gaps = 7/250 (2%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
S TY +++ L +AEE F + + + ++Y ++ + G + +
Sbjct: 739 SYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFY 798
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
E+ +++ PD+ TY IS ++ + K EM C G D + + L+N Y A
Sbjct: 799 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLC-RGLEPDIITFTELMNGYCKA 857
Query: 277 SHLVNA--ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 334
H+ +A + +++A S +TY LI G+ D +++ + +
Sbjct: 858 GHIKDAFRVHNHMIQAGCS---PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 914
Query: 335 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 394
Y I++ G+++E +++ ++ ++A + D L+ A+ G +KA E
Sbjct: 915 FTYNSIVNGLCKSGNIEEAVKLVGEF-EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILT 973
Query: 395 LLLQKNCAPT 404
+L K PT
Sbjct: 974 EMLGKGLQPT 983
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 90/201 (44%), Gaps = 8/201 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+T L++ Y A + A + + Q+ S N + Y ++ G ++ ++ E+
Sbjct: 846 TFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 905
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + P+IFTYN ++ + NI++ K + E +G + D V Y L++ Y +
Sbjct: 906 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA-AGLNADTVTYTTLMDAYCKSGE 964
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLI---ILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
+ A+ L E Q +T++ L+ L+ L + +K+ W + T+
Sbjct: 965 MDKAQ-EILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN-WMLAKGIAPNATTF 1022
Query: 336 NYICILSSYLMLGHLKEVGEI 356
N C++ Y + +LK I
Sbjct: 1023 N--CLVKQYCIRNNLKAATAI 1041
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 48/255 (18%), Positives = 98/255 (38%), Gaps = 5/255 (1%)
Query: 149 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 208
GL LS + Y A L T A +F + + +N YN ++ +G++
Sbjct: 628 GLVLSVDSCNVYLA--RLSKDCNKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRI 685
Query: 209 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268
+ ++ ++ K PD+ +Y+ I+ +D+V K +++M G + Y +
Sbjct: 686 NEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMK-QKGLKPNSYTYGS 744
Query: 269 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 328
++ + L AE + + I I Y L+ + G+ + + +
Sbjct: 745 IIGLLCRICKLAEAEEAFSEMIGQGILPDT-IVYTTLVDGFCKRGDIRAASKFFYEMHSR 803
Query: 329 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEK 388
Y I+S + +G + E G++ + DI L+ + G +
Sbjct: 804 DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEP-DIITFTELMNGYCKAGHIKD 862
Query: 389 ANEFHMLLLQKNCAP 403
A H ++Q C+P
Sbjct: 863 AFRVHNHMIQAGCSP 877
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/234 (17%), Positives = 96/234 (41%), Gaps = 3/234 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y ++H +A L ++ + + + Y+ ++ Y G+++KV ++E++
Sbjct: 671 SYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKM 730
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K+K + P+ +TY I + + ++ EM G D + Y LV+ +
Sbjct: 731 KQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEM-IGQGILPDTIVYTTLVDGFCKRGD 789
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ A S E +TY +I + +G+ + +++ + + +
Sbjct: 790 -IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFT 848
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
+++ Y GH+K+ + + Q+ S ++ L+ G + ANE
Sbjct: 849 ELMNGYCKAGHIKDAFRVHNHMIQAGCSP-NVVTYTTLIDGLCKEGDLDSANEL 901
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 2/136 (1%)
Query: 147 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 206
FE L+A T TYT L+ Y + +KA+E+ + L + +N +M + G
Sbjct: 940 FEAAGLNADTV-TYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHG 998
Query: 207 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 266
+E ++ + K + P+ T+N + N+ +M C G D Y
Sbjct: 999 MLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDM-CSRGVEPDGKTY 1057
Query: 267 VNLVNIYITASHLVNA 282
NLV + A ++ A
Sbjct: 1058 ENLVKGHCNARNMKEA 1073
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 108/250 (43%), Gaps = 7/250 (2%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
S Y +++ L +AEE F + + + + ++Y ++ + G + +
Sbjct: 316 SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFY 375
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
E+ +++ PD+ TY IS ++ + K EM C G D V + L+N Y A
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC-KGLEPDSVTFTELINGYCKA 434
Query: 277 SHLVNA--ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 334
H+ +A + +++A S +TY LI G+ D +++ + +
Sbjct: 435 GHMKDAFRVHNHMIQAGCS---PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 491
Query: 335 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 394
Y I++ G+++E +++ ++ ++A + D L+ A+ G +KA E
Sbjct: 492 FTYNSIVNGLCKSGNIEEAVKLVGEF-EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550
Query: 395 LLLQKNCAPT 404
+L K PT
Sbjct: 551 EMLGKGLQPT 560
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 42/234 (17%), Positives = 96/234 (41%), Gaps = 3/234 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y ++H ++A L ++ + + + Y+ ++ Y G+++KV ++E +
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
KRK + P+ + Y I + + ++ EM G D V Y L++ +
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM-IRQGILPDTVVYTTLIDGFCKRGD 366
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ A S E +TY +I + +G+ + +++ + + S +
Sbjct: 367 -IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
+++ Y GH+K+ + + Q+ S ++ L+ G + ANE
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSP-NVVTYTTLIDGLCKEGDLDSANEL 478
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 50/272 (18%), Positives = 104/272 (38%), Gaps = 11/272 (4%)
Query: 138 FGI-HSGERYFE-----GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFN 191
FG+ R FE GL LS + Y L L T A +F + + +N
Sbjct: 188 FGLLREARRVFEKMLNYGLVLSVDSCNVY--LTRLSKDCYKTATAIIVFREFPEVGVCWN 245
Query: 192 ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 251
YN ++ +G++++ ++ ++ K PD+ +Y+ ++ +D+V K ++
Sbjct: 246 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE 305
Query: 252 EMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAG 311
M + ++ Y +++ + L AE + E + + Y LI +
Sbjct: 306 VMKRKGLKPNSYI-YGSIIGLLCRICKLAEAEEA-FSEMIRQGILPDTVVYTTLIDGFCK 363
Query: 312 LGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDIS 371
G+ + + + Y I+S + +G + E G++ + D
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP-DSV 422
Query: 372 ACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
L+ + G + A H ++Q C+P
Sbjct: 423 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 454
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 2/136 (1%)
Query: 147 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 206
FE L+A T TYT L+ Y + +KA+E+ + + L + +N +M + G
Sbjct: 517 FEAAGLNADTV-TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 575
Query: 207 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 266
+E ++ + K + P+ T+N + N+ +M C G D Y
Sbjct: 576 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM-CSRGVGPDGKTY 634
Query: 267 VNLVNIYITASHLVNA 282
NLV + A ++ A
Sbjct: 635 ENLVKGHCKARNMKEA 650
>gi|224093900|ref|XP_002310039.1| predicted protein [Populus trichocarpa]
gi|222852942|gb|EEE90489.1| predicted protein [Populus trichocarpa]
Length = 507
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 107/253 (42%), Gaps = 12/253 (4%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
+T+ LL +G K +E+AE +E +K+ + + + YN ++ ++ ++EK VV
Sbjct: 215 QTFNILL---SGWKSSEEAELFYEEMKELGVKPDIVTYNSLIDVFCKGRELEKAYGVVAR 271
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
++ ++++PD+ TY I D+ + L EM + G D Y ++ Y A
Sbjct: 272 MREEDILPDVITYTSIIGGLGLVGQPDKARDMLKEMK-EHGCYPDVAAYNAVIRNYCIAK 330
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL-RMTKQKMTSRN 336
L +A S + E E +Y+ +++ + + W RM
Sbjct: 331 RL-DAAYSLMAEMESKGMSPNATSYNLFFRVFSW---SNDLRNSWDFYGRMMDAGCLPNT 386
Query: 337 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFD--ISACNRLLGAFSDVGLTEKANEFHM 394
C+ L H ++V + W F I + LLG D+G +A + +
Sbjct: 387 QSCMFLIKLFKRH-EKVEMALQLWNDMVEKGFGSYILVSDVLLGMLCDMGKLVEAEKCFL 445
Query: 395 LLLQKNCAPTNAS 407
+++K P+N S
Sbjct: 446 QMVEKGHKPSNVS 458
>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
Length = 663
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 88/197 (44%), Gaps = 8/197 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +LL+ Y A ++A LF ++++ L+ L YN ++ Y +G +E+ + EE+
Sbjct: 374 TYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEM 433
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ +PD++TY + + ++ ++F DEM G D Y + IT
Sbjct: 434 VEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEM-LSKGLRPDCFAYNTRICAEITLGD 492
Query: 279 LVNA---ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
+ + ++E S T +TY+ LI GN +++ + +
Sbjct: 493 ISKSFQLREVIMLEGISSDT----VTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCI 548
Query: 336 NYICILSSYLMLGHLKE 352
Y C++ ++ G L+E
Sbjct: 549 TYTCLIHAHCERGFLRE 565
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/253 (19%), Positives = 102/253 (40%), Gaps = 9/253 (3%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
T TY A++H + E A+ F ++ L + + YN ++ Y G ++ L+
Sbjct: 335 PTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLL 394
Query: 215 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274
+++R + P + TYN+ I ++++ ++ +EM + G D Y I +
Sbjct: 395 FGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEM-VEQGCLPDVYTY----TILM 449
Query: 275 TASHLVNAESST---LVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 331
SH V + + T E + Y+ I LG+ K Q+ + + +
Sbjct: 450 KGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGIS 509
Query: 332 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 391
+ Y ++ G+LK+ E++ Q + D L+ A + G +A +
Sbjct: 510 SDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQP-DCITYTCLIHAHCERGFLREARK 568
Query: 392 FHMLLLQKNCAPT 404
F ++ P+
Sbjct: 569 FFNDMISDGLPPS 581
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 73/155 (47%), Gaps = 13/155 (8%)
Query: 195 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 254
YN ++T ++ G V+KV + E++ + ++P + TYN I + I+ + EM
Sbjct: 305 YNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMR 364
Query: 255 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV--EAEKSITQRQWITYDFLIILYAGL 312
G D + Y +L+N Y A N + + L+ + ++ +TY+ LI Y L
Sbjct: 365 A-MGLLPDVITYNSLLNGYCKAG---NQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRL 420
Query: 313 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 347
G+ ++ R K++M + + + +Y +L
Sbjct: 421 GDLEEA-------RRLKEEMVEQGCLPDVYTYTIL 448
>gi|125592120|gb|EAZ32470.1| hypothetical protein OsJ_16686 [Oryza sativa Japonica Group]
Length = 879
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 98/220 (44%), Gaps = 16/220 (7%)
Query: 152 LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 211
LS+ Y+ ++H + + E+AEEL +++ + +Y+ MM Y + K
Sbjct: 342 LSSLNGIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKC 401
Query: 212 ALVVEEIKRKNVVPDIFTY----NLW--ISSCAATLNIDQVKKFLDEM-SCDSGGSDDWV 264
+V E +K P I +Y NL+ I A L+I + EM SC G +
Sbjct: 402 LVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISK------EMESC--GIKHNNK 453
Query: 265 KYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS 324
Y L+N +I NA + E +S Q Y+ LI + +GN D+ I +
Sbjct: 454 TYSMLINGFIHLHDFANA-FAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEK 512
Query: 325 LRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
++ + + ++R + I+ Y + G +K + +D ++S
Sbjct: 513 MQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSG 552
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 87/188 (46%), Gaps = 4/188 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT ++ YA + KA E F ++K+S L + +Y ++ G+++ V E+
Sbjct: 594 TYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREM 653
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + + F YN+ I A ++ + + + +M D G + Y + +N A
Sbjct: 654 SFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKED-GVPPNIHTYTSYINACCKAGD 712
Query: 279 LVNAESSTLVEAEKSITQRQWI-TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
+ AE ++E + + + TY LI +A + D+ + ++ +++ K +Y
Sbjct: 713 MQRAEK--VIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASY 770
Query: 338 ICILSSYL 345
C+++S L
Sbjct: 771 HCLVTSLL 778
Score = 41.2 bits (95), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 91/204 (44%), Gaps = 4/204 (1%)
Query: 147 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 206
FE +P ++ + ++ YA A FE ++ + NA ++ ++ Y
Sbjct: 234 FERIPKPSR--REFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAR 291
Query: 207 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 266
+ VEE+K + + I TY++ IS A +N Q L + + S + + Y
Sbjct: 292 DMRGALSCVEEMKSEGLELTIVTYSILISG-FAKINDSQSADNLFKEAKTKLSSLNGIIY 350
Query: 267 VNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 326
N+++ + + ++ AE + E E+ Y ++ Y + N++K +++ L+
Sbjct: 351 SNIIHAHCQSGNMERAE-ELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLK 409
Query: 327 MTKQKMTSRNYICILSSYLMLGHL 350
K + +Y C+L+ Y+ +G +
Sbjct: 410 ECGFKPSIISYGCLLNLYVKIGKV 433
>gi|414869157|tpg|DAA47714.1| TPA: hypothetical protein ZEAMMB73_516901 [Zea mays]
Length = 853
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 146/366 (39%), Gaps = 21/366 (5%)
Query: 51 NSDGK-DDLKSR------IFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQR 103
NSD + DD+++R +F S K + + S G Q S LR LK LR ++
Sbjct: 245 NSDARQDDVQTRNPSGPNVFSGSGNKIQGSTGRVKAHSGGPQ---SNLRS-LKLLRSVEQ 300
Query: 104 YKHALEISEW--MVTHKEFVLSDSDYATRIDLMTKVFGIHS-GERYFEGL---PLSAKTS 157
Y H L+ +W M H L A + + + K+ H+ +F+ L P
Sbjct: 301 YYHTLQQMKWGPMTEHVLDNLHCKIDAFQANQVLKLLHDHTVALGFFQWLKRQPGFKHDG 360
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
TYT ++ + A+ +EL + + +++ + YN ++ Y +++ V EE
Sbjct: 361 HTYTTMIGILGQARQFGVLKELLDEMSRAHCKPTVVTYNRIIHAYGRANYLKEAVKVFEE 420
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
++ PD TY I A +D M + G S D Y +VN
Sbjct: 421 MQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQ-EVGLSPDTFTYSVMVNCLGKGG 479
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
L A E T +TY+ +I L A N + + +++K +++ + Y
Sbjct: 480 QLAAAYKLFCEMIENGCTP-NLVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITY 538
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 397
++ GHL E + + ++ D + L+ + G +KA ++ +L
Sbjct: 539 SIVMEVLGHCGHLDEAEAVFIEMRRDWAPDEPVYGL--LVDLWGKAGNVDKALGWYQAML 596
Query: 398 QKNCAP 403
Q P
Sbjct: 597 QDGLQP 602
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 55/286 (19%), Positives = 118/286 (41%), Gaps = 26/286 (9%)
Query: 107 ALEISEWMVTHKEFVLSDSDYATRIDLMTKV--FGIHSGERYFEGLPLSAKTSETYTALL 164
AL +W+ F Y T I ++ + FG+ T TY ++
Sbjct: 343 ALGFFQWLKRQPGFKHDGHTYTTMIGILGQARQFGVLKELLDEMSRAHCKPTVVTYNRII 402
Query: 165 HLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVV 224
H Y A + ++A ++FE ++++ + + Y ++ ++ G ++ + ++ +
Sbjct: 403 HAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQEVGLS 462
Query: 225 PDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES 284
PD FTY++ ++ + K EM ++G + + V Y ++ + A + N
Sbjct: 463 PDTFTYSVMVNCLGKGGQLAAAYKLFCEM-IENGCTPNLVTYNIMIALQAKARNYEN--- 518
Query: 285 STLVEAEKSIT----QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICI 340
+V+ K + + ITY ++ + G+ D+ + ++ +R R++
Sbjct: 519 --VVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMR--------RDWAPD 568
Query: 341 LSSYLMLGHLKEVGEIIDQ---WKQSATSD---FDISACNRLLGAF 380
Y +L L +D+ W Q+ D ++ CN LL AF
Sbjct: 569 EPVYGLLVDLWGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAF 614
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 41/84 (48%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
A Y L+ L+ A +KA ++ + Q L N N +++ ++ + + + +
Sbjct: 566 APDEPVYGLLVDLWGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAFLKMNRFQDAYI 625
Query: 214 VVEEIKRKNVVPDIFTYNLWISSC 237
V++ + + +VP + TY L +S C
Sbjct: 626 VLQNMLARGLVPSVQTYTLLLSCC 649
>gi|388499386|gb|AFK37759.1| unknown [Lotus japonicus]
Length = 500
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 88/199 (44%), Gaps = 37/199 (18%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNL-----SFNALM------------------- 194
TYTAL++ +A EKAEE+FE+++++ L S+NALM
Sbjct: 304 TYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYSYNALMEAYSRAGFPYGAAEIFSLM 363
Query: 195 -----------YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 243
YN ++ Y G + V E++KR + P + ++ + +S+ + T N+
Sbjct: 364 QHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNV 423
Query: 244 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 303
+ + L++M C SG D +++N+Y E L E + TY+
Sbjct: 424 SKCEDILNQM-CKSGLKLDTFVLNSMLNLYGRLGQFGKME-EVLTVMENGSCEADISTYN 481
Query: 304 FLIILYAGLGNKDKIDQIW 322
LI Y G DK++ ++
Sbjct: 482 ILINRYGQAGFIDKMEGLF 500
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 102/236 (43%), Gaps = 9/236 (3%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
++ETYT L++LY + A ++F + N Y ++ + G EK V
Sbjct: 266 STETYTMLINLYGKDGKSFMALKVFNEMLSHKCKPNICTYTALVNAFAREGLCEKAEEVF 325
Query: 216 EEIKRKNVVPDIFTYNLWI---SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 272
E+++ + PD+++YN + S ++ + M C+ D Y LV+
Sbjct: 326 EQMQEAGLEPDVYSYNALMEAYSRAGFPYGAAEIFSLMQHMGCEP----DRASYNILVDA 381
Query: 273 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 332
Y A L +AE + + ++ ++ L+ ++ GN K + I + + K+
Sbjct: 382 YGRAGFLNDAE-AVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKL 440
Query: 333 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEK 388
+ +L+ Y LG ++ E++ ++ + + DIS N L+ + G +K
Sbjct: 441 DTFVLNSMLNLYGRLGQFGKMEEVLTVM-ENGSCEADISTYNILINRYGQAGFIDK 495
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 130/343 (37%), Gaps = 42/343 (12%)
Query: 97 ELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKT 156
+LR +++ + I W++ F Y ID + F E + L L A+
Sbjct: 135 QLRMRKQWDSIISICRWILLRSSFKQDVICYNLLIDAFGQKFLYKEAESTYLQL-LEARC 193
Query: 157 ---SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
+TY L+ Y + EKAE +F +K L +A++YN + M G K
Sbjct: 194 IPNEDTYALLIKAYCLSGLLEKAEAVFVEMKNYGLPSSAVVYNSYINGLMKGGNPNKAEE 253
Query: 214 VVEEIKRKNVVPDIFTYNLWIS-------------------SCAATLNIDQ----VKKFL 250
+ +KR P TY + I+ S NI V F
Sbjct: 254 IFLRMKRDGCKPSTETYTMLINLYGKDGKSFMALKVFNEMLSHKCKPNICTYTALVNAFA 313
Query: 251 DEMSC-----------DSGGSDDWVKYVNLVNIYITASHLVN-AESSTLVEAEKSITQRQ 298
E C ++G D Y L+ Y A AE +L++ R
Sbjct: 314 REGLCEKAEEVFEQMQEAGLEPDVYSYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRA 373
Query: 299 WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 358
+Y+ L+ Y G + + +++ ++ T ++++ +LS++ G++ + +I++
Sbjct: 374 --SYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILN 431
Query: 359 QWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 401
Q +S D N +L + +G K E ++ +C
Sbjct: 432 QMCKSGLK-LDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSC 473
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 58/125 (46%), Gaps = 2/125 (1%)
Query: 125 SDYATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFER 182
+ Y +D + ++ E FE + T +++ LL ++ K E++ +
Sbjct: 373 ASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQ 432
Query: 183 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 242
+ +S L + + N M+ LY +GQ K+ V+ ++ + DI TYN+ I+
Sbjct: 433 MCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGF 492
Query: 243 IDQVK 247
ID+++
Sbjct: 493 IDKME 497
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 77/184 (41%), Gaps = 3/184 (1%)
Query: 224 VPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAE 283
+P+ TY L I + + +++ + EM + G V Y + +N + + AE
Sbjct: 194 IPNEDTYALLIKAYCLSGLLEKAEAVFVEMK-NYGLPSSAVVYNSYINGLMKGGNPNKAE 252
Query: 284 SSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSS 343
+ ++ + TY LI LY G +++ + K K Y ++++
Sbjct: 253 E-IFLRMKRDGCKPSTETYTMLINLYGKDGKSFMALKVFNEMLSHKCKPNICTYTALVNA 311
Query: 344 YLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
+ G ++ E+ +Q Q A + D+ + N L+ A+S G A E L+ C P
Sbjct: 312 FAREGLCEKAEEVFEQM-QEAGLEPDVYSYNALMEAYSRAGFPYGAAEIFSLMQHMGCEP 370
Query: 404 TNAS 407
AS
Sbjct: 371 DRAS 374
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 142/338 (42%), Gaps = 34/338 (10%)
Query: 82 EGNQATVSELRHILKELRKSQRYKHAL----EISEWMVTHKEFVLSDS--------DYAT 129
+G +V+ L L+ L ++RY+ L EI E + +F+ + D
Sbjct: 141 DGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKR 200
Query: 130 RIDLMT--KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN 187
I+LMT K G+ G F Y ++ K + AE+LF+ +
Sbjct: 201 AIELMTCMKRGGVSPG--VF-----------VYNVVIGGLCKEKRMKDAEKLFDEMLDRR 247
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 247
++ N + YN ++ Y VGQ+E+ + E +K +NV P I T+N ++ +++ +
Sbjct: 248 VAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQ 307
Query: 248 KFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLII 307
+ L+EM G D Y L + ++ N ++S + E Q + Y I+
Sbjct: 308 RVLEEMEV-YGFVPDRFTYTTLFDGHLKCG---NVDASITLSEEAVRKGVQILDYTCSIL 363
Query: 308 LYAGL--GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 365
L A GN +K +++ K + I++ Y +G + + I++ +
Sbjct: 364 LNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGL 423
Query: 366 SDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
++ N L+ F ++ E+A + +++K P
Sbjct: 424 RPNHVTY-NSLVKKFCEMKNMEEAEKCIKKMVEKGVLP 460
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 105/237 (44%), Gaps = 14/237 (5%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L++ +AE L + + LSF+ + YN +++ Y S G V+K + E +
Sbjct: 569 TYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETM 628
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K+ + P + TY+ I+ C + V+K EM D V Y L++ Y+
Sbjct: 629 KKSGIKPTLNTYHRLIAGCGKE-GLVLVEKIYQEM-LQMNLVPDRVIYNALIHCYVEHGD 686
Query: 279 LVNAES-STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
+ A S + +EA+ Q +TY+ LI+ + G K+ + +++ + Y
Sbjct: 687 VQKACSLHSAMEAQG--IQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETY 744
Query: 338 ICILSSYLMLGH--LKEVGEIIDQWKQSATSDF--DISACNRLLGAFSDVGLTEKAN 390
L++GH LK+ +++ + F +S C+ L+ + G + A+
Sbjct: 745 -----DILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDAD 796
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 96/212 (45%), Gaps = 33/212 (15%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +L+ + K E+AE+ +++ + + N YN ++ Y ++ ++EE+
Sbjct: 429 TYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEM 488
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM------------------SCDSGGS 260
++K + P++ +Y I+ NI + + L +M SC +G
Sbjct: 489 EKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKL 548
Query: 261 DDWVKYVN------LVNIYITASHLVNA--ESSTLVEAEK---SITQRQW----ITYDFL 305
D ++ + +V +T + L+N + ++EAE IT++ ITY+ L
Sbjct: 549 KDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSL 608
Query: 306 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
I Y+ GN K +++++++ + K T Y
Sbjct: 609 ISGYSSAGNVQKALELYETMKKSGIKPTLNTY 640
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 77/377 (20%), Positives = 141/377 (37%), Gaps = 55/377 (14%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
A N+ +R E + T+ +L L ++Q + A + E M + FV Y T
Sbjct: 271 AFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYG-FVPDRFTYTTLF 329
Query: 132 DLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKW--TEKAEELFERVKQSNLS 189
D K + + E YT + L A K EKAEE+ ++ ++ L+
Sbjct: 330 DGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLA 389
Query: 190 FNALMYNEMMTLYMSVGQVEKVALVVEEIK------------------------------ 219
+ +N ++ Y VG + K +E+++
Sbjct: 390 PVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKC 449
Query: 220 -----RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274
K V+P++ TYN I + D+ + L+EM G + + Y L+N
Sbjct: 450 IKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEME-KKGLKPNVISYGCLINCLC 508
Query: 275 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 334
++++ AE + + I Y+ LI G K+ ++ +M +
Sbjct: 509 KDANILEAEVILGDMVHRGVVPNAQI-YNMLI---DGSCIAGKLKDAFRFF----DEMVA 560
Query: 335 RNYICILSSYLML-------GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 387
R + L +Y +L G + E + + + S FD+ N L+ +S G +
Sbjct: 561 REIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLS-FDVITYNSLISGYSSAGNVQ 619
Query: 388 KANEFHMLLLQKNCAPT 404
KA E + + + PT
Sbjct: 620 KALELYETMKKSGIKPT 636
>gi|147821100|emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]
Length = 844
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 133/325 (40%), Gaps = 19/325 (5%)
Query: 92 RHILKELRKSQRYKHALEISEWMVT-HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGL 150
+ ++ + + Q AL+I + H+ F + Y I+ ++K E L
Sbjct: 102 KRVVSMISRQQNLDLALQIFDHAGKFHRNFAHNYETYLAMIEKLSKARAFEPMETLISQL 161
Query: 151 PLSA-KTSET-YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 208
S K E + ++ Y A + A F R+ L + +N ++ + +
Sbjct: 162 HKSQIKCGENLFITVIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRF 221
Query: 209 EKVALVVEEIKRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 267
+ V L+ + ++K +VP++FT N+ + + +ID + L+EM G + V Y
Sbjct: 222 DLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPA-MGFIPNVVTYT 280
Query: 268 NLVNIYITASHLVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWK 323
++ Y++ +V A V E I R W+ TY L+ Y G ++
Sbjct: 281 TILGGYVSKGDMVGARR---VFGE--ILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMD 335
Query: 324 SLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA--CNRLLGAFS 381
+ + + Y I+ +Y K+ GE+++ + S+ C R++
Sbjct: 336 EMEENRVEPNDVTYGVIIEAYC---KEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLC 392
Query: 382 DVGLTEKANEFHMLLLQKNCAPTNA 406
+ G E A E LL+KNC P NA
Sbjct: 393 EEGKVEVACELWKKLLKKNCTPDNA 417
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 96/245 (39%), Gaps = 38/245 (15%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+ AL++ + K ++A +LF+ + + +L NA+ +N M+ + G +E+ + +
Sbjct: 345 TFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSM 404
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + P++ TYN I+ N+ KK L+EM
Sbjct: 405 LDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEM------------------------- 439
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
E + +TY+ LI + G K +++ + K Y
Sbjct: 440 ------------ENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYN 487
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
++ Y M G+LK ++ Q ++ ++ N L+ F G E AN +L+
Sbjct: 488 TLMDGYCMEGNLKAALKVRTQMEKEGKRA-NVVTYNVLIKGFCKTGKLEDANRLLNEMLE 546
Query: 399 KNCAP 403
K P
Sbjct: 547 KGLNP 551
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 101/233 (43%), Gaps = 16/233 (6%)
Query: 177 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 236
+E+ +R Q NL+ +N + G++ K V+E+IK P+I TYN I
Sbjct: 189 KEMIKRRIQPNLT----TFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDG 244
Query: 237 -C--AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 293
C + + + L EM + ++ + + L++ + +++ A+++ E ++
Sbjct: 245 HCKKGSAGKMYRADAILKEMLANKICPNE-ITFNTLIDGFCKDENVLAAKNA-FEEMQRQ 302
Query: 294 ITQRQWITYDFLIILYAGLGNKDKIDQ---IWKSLRMTKQKMTSRNYICILSSYLMLGHL 350
+ +TY+ LI GL N K+D+ +W + K + +++ + +
Sbjct: 303 GLKPNIVTYNSLI---NGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMI 359
Query: 351 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
KE ++ D + I+ N ++ AF G+ E+ H +L + P
Sbjct: 360 KEARKLFDDIAEQDLVPNAITF-NTMIDAFCKAGMMEEGFALHNSMLDEGIFP 411
>gi|125535459|gb|EAY81947.1| hypothetical protein OsI_37125 [Oryza sativa Indica Group]
Length = 697
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 93/206 (45%), Gaps = 6/206 (2%)
Query: 191 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVV-----PDIFTYNLWISSCAATLNIDQ 245
N+ +Y +M YM+ G+VE V ++ ++R+ PD TY IS+ A ++++
Sbjct: 350 NSRVYTTLMKGYMNAGRVEDVVAMLRAMRREGETSPASRPDHVTYTTVISTLVAAGDMER 409
Query: 246 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFL 305
+ L+EM +G + V Y L+ Y A+ V+ ++ Q +TY+ L
Sbjct: 410 ARAVLEEMG-QAGVAASRVTYNVLIKGYCQQLQAGKAKELLAVDMAEAGIQPDVVTYNTL 468
Query: 306 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 365
I + ++ +R ++ +Y ++ ++ G K ++ D+ ++
Sbjct: 469 IDGCVLTDDSAGAVALFNEMRERGIAPSAVSYTTLMKAFAASGQPKLAHKVFDEMEKDPR 528
Query: 366 SDFDISACNRLLGAFSDVGLTEKANE 391
D +A N L+ A+ +GL E A +
Sbjct: 529 VAVDRAAWNMLVEAYCRLGLLESAKK 554
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 102/271 (37%), Gaps = 21/271 (7%)
Query: 145 RYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMS 204
R E P S TYT ++ A E+A + E + Q+ ++ + + YN ++ Y
Sbjct: 379 REGETSPASRPDHVTYTTVISTLVAAGDMERARAVLEEMGQAGVAASRVTYNVLIKGYCQ 438
Query: 205 VGQVEKVA-LVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW 263
Q K L+ ++ + PD+ TYN I C T + +EM + G +
Sbjct: 439 QLQAGKAKELLAVDMAEAGIQPDVVTYNTLIDGCVLTDDSAGAVALFNEMR-ERGIAPSA 497
Query: 264 VKYVNLVNIYITASHLVNAESSTLVEAEK----SITQRQWITYDFLIILYAGLGNKDKID 319
V Y L+ + AS E EK ++ + W + L+ Y LG
Sbjct: 498 VSYTTLMKAF-AASGQPKLAHKVFDEMEKDPRVAVDRAAW---NMLVEAYCRLG------ 547
Query: 320 QIWKSLRMTKQKMTSRNYICILSSYLMLGH----LKEVGEIIDQWKQSATSDFDISACNR 375
+ +S + ++M +R +++Y L + GE + W++ + D
Sbjct: 548 -LLESAKKVVERMKARGVQPDVATYGSLAKGIAVARRPGEALLLWEEIKEKEVDGEVVEA 606
Query: 376 LLGAFSDVGLTEKANEFHMLLLQKNCAPTNA 406
L L KA E + + P A
Sbjct: 607 LADVCVRAALFRKALEMVARMEEMGVEPNKA 637
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 90/222 (40%), Gaps = 11/222 (4%)
Query: 150 LPLSAKT----SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNA-----LMYNEMMT 200
+PL K S YT L+ Y A E + +++ + A + Y +++
Sbjct: 340 VPLLPKAYPPNSRVYTTLMKGYMNAGRVEDVVAMLRAMRREGETSPASRPDHVTYTTVIS 399
Query: 201 LYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGS 260
++ G +E+ V+EE+ + V TYN+ I L + K+ L ++G
Sbjct: 400 TLVAAGDMERARAVLEEMGQAGVAASRVTYNVLIKGYCQQLQAGKAKELLAVDMAEAGIQ 459
Query: 261 DDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQ 320
D V Y L++ + A + E+ I ++Y L+ +A G +
Sbjct: 460 PDVVTYNTLIDGCVLTDDSAGAVALFNEMRERGIAP-SAVSYTTLMKAFAASGQPKLAHK 518
Query: 321 IWKSLRMTKQKMTSR-NYICILSSYLMLGHLKEVGEIIDQWK 361
++ + + R + ++ +Y LG L+ +++++ K
Sbjct: 519 VFDEMEKDPRVAVDRAAWNMLVEAYCRLGLLESAKKVVERMK 560
>gi|115474201|ref|NP_001060699.1| Os07g0688100 [Oryza sativa Japonica Group]
gi|33146488|dbj|BAC79597.1| membrane-associated salt-inducible protein-like [Oryza sativa
Japonica Group]
gi|50509161|dbj|BAD30301.1| membrane-associated salt-inducible protein-like [Oryza sativa
Japonica Group]
gi|113612235|dbj|BAF22613.1| Os07g0688100 [Oryza sativa Japonica Group]
gi|215678726|dbj|BAG95163.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637719|gb|EEE67851.1| hypothetical protein OsJ_25651 [Oryza sativa Japonica Group]
Length = 665
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 127/307 (41%), Gaps = 25/307 (8%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
A ++++ +G V ++ L +R+ A+ + E MV +
Sbjct: 284 ALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRR----------GLKP 333
Query: 132 DLMTK---VFGIHSGERYFEGLPLSAK--------TSETYTALLHLYAGAKWTEKAEELF 180
D++ +FG+ ++ E L+++ Y AL+ + A EKA +
Sbjct: 334 DVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTV 393
Query: 181 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 240
++++ + + YN ++ Y S+G +K ++ +++ V PD ++YN+ +
Sbjct: 394 SFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKA 453
Query: 241 LNIDQVKKFL-DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 299
+D+ F+ D M + GG D V L++ + A VN+ + E Q
Sbjct: 454 HQLDKAFAFVSDHM--EVGGFCDIVSCNILIDAFCRAKK-VNSALNLFKEMGYKGIQADA 510
Query: 300 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 359
+TY LI G+G + ++++ + TK Y +L + +GH K +I Q
Sbjct: 511 VTYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQ 570
Query: 360 WKQSATS 366
Q S
Sbjct: 571 MTQKEVS 577
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L++ G ++ AEELF+++ + + N +YN M+ VG + + ++
Sbjct: 512 TYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQM 571
Query: 219 KRKNVVPDIFTYNLWI 234
+K V PD T+N I
Sbjct: 572 TQKEVSPDTVTFNTLI 587
>gi|218200292|gb|EEC82719.1| hypothetical protein OsI_27404 [Oryza sativa Indica Group]
Length = 665
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 127/307 (41%), Gaps = 25/307 (8%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
A ++++ +G V ++ L +R+ A+ + E MV +
Sbjct: 284 ALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRR----------GLKP 333
Query: 132 DLMTK---VFGIHSGERYFEGLPLSAK--------TSETYTALLHLYAGAKWTEKAEELF 180
D++ +FG+ ++ E L+++ Y AL+ + A EKA +
Sbjct: 334 DVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTV 393
Query: 181 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 240
++++ + + YN ++ Y S+G +K ++ +++ V PD ++YN+ +
Sbjct: 394 SFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKA 453
Query: 241 LNIDQVKKFL-DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 299
+D+ F+ D M + GG D V L++ + A VN+ + E Q
Sbjct: 454 HQLDKAFAFVSDHM--EVGGFCDIVSCNILIDAFCRAKK-VNSALNLFKEMGYKGIQADA 510
Query: 300 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 359
+TY LI G+G + ++++ + TK Y +L + +GH K +I Q
Sbjct: 511 VTYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQ 570
Query: 360 WKQSATS 366
Q S
Sbjct: 571 MTQKEVS 577
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L++ G ++ AEELF+++ + + N +YN M+ VG + + ++
Sbjct: 512 TYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQM 571
Query: 219 KRKNVVPDIFTYNLWI 234
+K V PD T+N I
Sbjct: 572 TQKEVSPDTVTFNTLI 587
>gi|356558071|ref|XP_003547332.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Glycine max]
Length = 647
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 6/154 (3%)
Query: 166 LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVP 225
L + K TE A +L ++ + ++ + +MYN + T + Q+ + + E++K+ P
Sbjct: 413 LCSAGKMTE-AIDLLNKIHEKGITTDTIMYNTVFTALGRLKQISHIHDLYEKMKQDGPPP 471
Query: 226 DIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESS 285
DIFTYN+ ISS +D KF +E+ +S D + Y +L+N + + V+
Sbjct: 472 DIFTYNILISSFGRAGRVDIAVKFFEELE-NSDCKPDVISYNSLINC-LGKNGDVDEAHM 529
Query: 286 TLVEAEKSITQRQWITYDFLIILYAGLGNKDKID 319
E ++ +TY LI + G DK++
Sbjct: 530 RFKEMQEKGLNPDVVTYSTLIECF---GKTDKVE 560
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 5/114 (4%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
+TAL L K +L+E++KQ + YN +++ + G+V+ EE++
Sbjct: 445 FTALGRL----KQISHIHDLYEKMKQDGPPPDIFTYNILISSFGRAGRVDIAVKFFEELE 500
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
+ PD+ +YN I+ ++D+ EM + G + D V Y L+ +
Sbjct: 501 NSDCKPDVISYNSLINCLGKNGDVDEAHMRFKEMQ-EKGLNPDVVTYSTLIECF 553
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+ + A + A + FE ++ S+ + + YN ++ G V++ + +E+
Sbjct: 475 TYNILISSFGRAGRVDIAVKFFEELENSDCKPDVISYNSLINCLGKNGDVDEAHMRFKEM 534
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
+ K + PD+ TY+ I T ++ + DEM
Sbjct: 535 QEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEM 569
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 94/229 (41%), Gaps = 13/229 (5%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVA--LVVE 216
TY LL Y A + A ++ + + + YN ++ ++ + EKV V E
Sbjct: 199 TYKCLLQAYLRALDSSTAFRVYLDMIRHGYRLDIFGYNMLLD---ALAKDEKVCSYKVFE 255
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
++KR++ PD+FTY + I + D+ M G + + + Y ++ +
Sbjct: 256 DMKRRHCEPDVFTYTIMIRMTGKSSKTDEALALFQAMLA-KGCTPNLIGYNTMIEA-LAK 313
Query: 277 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 336
+V+ + ++ Q TY ++ L G +K+D I + ++K+ + +
Sbjct: 314 GRMVDKAVLLFSKMVENDIQPNEFTYSVILNLLVAEGKLNKLDNI---VDISKKYINKQI 370
Query: 337 YICILSSYLMLGHLKEVGEII-DQWKQSATSDFDISACNRLLGAFSDVG 384
Y + + +GH E + + W D D AC +L + G
Sbjct: 371 YAYFVRTLSKVGHASEAHRLFCNMWNFHDKGDKD--ACMSMLESLCSAG 417
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 109/262 (41%), Gaps = 40/262 (15%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT ++ + + T++A LF+ + + N + YN M+ V+K L+ ++
Sbjct: 268 TYTIMIRMTGKSSKTDEALALFQAMLAKGCTPNLIGYNTMIEALAKGRMVDKAVLLFSKM 327
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
++ P+ FTY++ ++ A ++++ +D KY+N IY ++
Sbjct: 328 VENDIQPNEFTYSVILNLLVAEGKLNKLDNIVDISK----------KYIN-KQIY---AY 373
Query: 279 LVNAESSTLVEAE-KSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL----RMTK---- 329
V S +E + W +D G+KD + +SL +MT+
Sbjct: 374 FVRTLSKVGHASEAHRLFCNMWNFHD--------KGDKDACMSMLESLCSAGKMTEAIDL 425
Query: 330 -----QKMTSRNYICILSSYLMLGHLKEVGEIIDQW---KQSATSDFDISACNRLLGAFS 381
+K + + I + + LG LK++ I D + KQ DI N L+ +F
Sbjct: 426 LNKIHEKGITTDTIMYNTVFTALGRLKQISHIHDLYEKMKQDGPPP-DIFTYNILISSFG 484
Query: 382 DVGLTEKANEFHMLLLQKNCAP 403
G + A +F L +C P
Sbjct: 485 RAGRVDIAVKFFEELENSDCKP 506
>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
Length = 506
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 96/217 (44%), Gaps = 4/217 (1%)
Query: 61 RIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEF 120
R F I + A ++ + + E + V ++ K R K A + + M+ ++
Sbjct: 251 RGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMI-QDI 309
Query: 121 VLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEE 178
+ S + T +D K + G+ F + TY +L+ Y K KA++
Sbjct: 310 KPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKK 369
Query: 179 LFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCA 238
+F + Q ++ N YN M+ + + +V+K + E+ K+++PD+ TYN I
Sbjct: 370 IFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLC 429
Query: 239 ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275
+ I + ++EM D G + + Y +++N +T
Sbjct: 430 KSGKISYAFQLVNEMH-DRGQPPNIITYNSILNALLT 465
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 3/163 (1%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLS 153
+++ L ++ + A + + M +H V +T ID ++K I + R F+ +
Sbjct: 370 LIRGLLQTGKIPQASSVYKTMTSHG-CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEAR 428
Query: 154 --AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 211
A Y+AL+H A+ + A E+ ++K++ + + + YN ++ G VE
Sbjct: 429 GLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAA 488
Query: 212 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 254
+E+ PD++TYN+ IS N D LD+MS
Sbjct: 489 RAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMS 531
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 99/250 (39%), Gaps = 13/250 (5%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYTA+++ A K ++A L E++ + + YN ++ +G++E+ ++ +I
Sbjct: 261 TYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKI 320
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
PD+ TY I + K EM+ G + D V Y L+ +
Sbjct: 321 VDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMA-SRGLALDTVCYTALIRGLLQTGK 379
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLII--LYAGLGNKDKID---QIWKSLRMTKQKMT 333
+ A S K++T + D + + + GL +I +I+KS+
Sbjct: 380 IPQASS-----VYKTMTSHGCVP-DVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPN 433
Query: 334 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 393
Y ++ + E++ Q K++ + I+ N L+ G E A F
Sbjct: 434 EVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY-NILIDGLCKSGDVEAARAFF 492
Query: 394 MLLLQKNCAP 403
+L+ C P
Sbjct: 493 DEMLEAGCKP 502
>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 827
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 124/315 (39%), Gaps = 43/315 (13%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEF--VLSDSDYATRIDLMTKVFGIHSGERYFEGLP 151
I+K L ++ A+ + W+ ++F VL+ S A I ++ K + + L
Sbjct: 150 IIKGLGFYKKCDMAMSVFSWVREREDFESVLNCSVVAVIITMLGKEGKVSAASSILNNLR 209
Query: 152 LSAKTSETY--TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV- 208
+ Y T+L+ YA A +F+++++ + YN ++ +Y +G
Sbjct: 210 KDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEEEGCKPTLITYNVILNVYGKMGMPW 269
Query: 209 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268
K++ +V +K V PD +TYN IS C ++ + +EM SG S D V +
Sbjct: 270 SKISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYEEAAQVFEEMKL-SGFSPDKVTFNT 328
Query: 269 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 328
L+++Y +S EA + + + ++ + I+ Y L
Sbjct: 329 LLDVY--------GKSRRPKEAMEVLKEMEFSGFSPSIVTYNSL---------------- 364
Query: 329 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEK 388
+S+Y G L+E E+ DQ + D+ LL F G+ E
Sbjct: 365 ------------ISAYARDGLLREAMELKDQMVEKGIKP-DVFTYTTLLSGFEKAGMDEP 411
Query: 389 ANEFHMLLLQKNCAP 403
A + C P
Sbjct: 412 AMRIFGEMRAAGCKP 426
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/259 (17%), Positives = 112/259 (43%), Gaps = 5/259 (1%)
Query: 147 FEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMS 204
FE + LS + + T+ LL +Y ++ ++A E+ + ++ S S + + YN +++ Y
Sbjct: 311 FEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYAR 370
Query: 205 VGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWV 264
G + + + +++ K + PD+FTY +S + + EM +G +
Sbjct: 371 DGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRA-AGCKPNIC 429
Query: 265 KYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS 324
+ L+ ++ E E +T++ L+ ++ G ++ ++K
Sbjct: 430 TFNALIKMHGNRGRFAEM-MKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKE 488
Query: 325 LRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 384
++ + ++S+Y G ++ + + ++ + D+S+ N +L A + G
Sbjct: 489 MKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTP-DLSSYNAVLAALARGG 547
Query: 385 LTEKANEFHMLLLQKNCAP 403
L E++ + + C P
Sbjct: 548 LWEQSEKVFAEMKDGRCKP 566
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 49/81 (60%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +L+++++ ++ E++EE+ + + L + + YN ++ Y G+++ + + +
Sbjct: 674 TYNSLMYMHSRSENFERSEEVLKEILAKGLKPDLISYNTVIFAYCRNGRMKDASRIFSYM 733
Query: 219 KRKNVVPDIFTYNLWISSCAA 239
K +VPD+ TYN +++S AA
Sbjct: 734 KTYGLVPDVITYNTFVASYAA 754
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 93/229 (40%), Gaps = 6/229 (2%)
Query: 159 TYTALLHLYA--GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
TY +L++Y G W+ K L +K S ++ + YN +++ E+ A V E
Sbjct: 254 TYNVILNVYGKMGMPWS-KISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYEEAAQVFE 312
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
E+K PD T+N + + + + L EM SG S V Y +L++ Y
Sbjct: 313 EMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEF-SGFSPSIVTYNSLISAYARD 371
Query: 277 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 336
L A EK I + TY L+ + G + +I+ +R K
Sbjct: 372 GLLREAMELKDQMVEKGI-KPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICT 430
Query: 337 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGL 385
+ ++ + G E+ ++ ++ + + DI N LL F G+
Sbjct: 431 FNALIKMHGNRGRFAEMMKVFEEIEICNCAP-DIVTWNTLLAVFGQNGM 478
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 108/254 (42%), Gaps = 14/254 (5%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+ AL+ ++ + ++FE ++ N + + + +N ++ ++ G +V+ V +E+
Sbjct: 430 TFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEM 489
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
KR VP+ T+N IS+ + + Q M ++G + D Y N V +
Sbjct: 490 KRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRM-LEAGVTPDLSSY-NAVLAALARGG 547
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L E + + +TY L+ YA N +I+++ +T +
Sbjct: 548 LWEQSEKVFAEMKDGRCKPNELTYCSLLHAYA---NSKEIERMHTLAEEIYSGLTEP--V 602
Query: 339 CILSSYLMLGH-----LKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 393
+L L+L + L E ++ K+ + D +S N ++ + + KANE
Sbjct: 603 PVLLKTLVLVNSKCDLLMETEHAFEELKKKGSPD--LSTLNAMIAIYGRRQMVAKANEIL 660
Query: 394 MLLLQKNCAPTNAS 407
+ + +P+ A+
Sbjct: 661 NFMNESGFSPSLAT 674
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 38/76 (50%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T A++ +Y + KA E+ + +S S + YN +M ++ E+ V++EI
Sbjct: 639 TLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLMYMHSRSENFERSEEVLKEI 698
Query: 219 KRKNVVPDIFTYNLWI 234
K + PD+ +YN I
Sbjct: 699 LAKGLKPDLISYNTVI 714
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 85/202 (42%), Gaps = 4/202 (1%)
Query: 114 MVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSET--YTALLHLYAGAK 171
++ + V Y ID + K + R F+ L ++ Y+ L+ Y
Sbjct: 352 LMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVG 411
Query: 172 WTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYN 231
++A LFE++ N S NA +N ++ S G +++ + +++ + + P ++T+N
Sbjct: 412 KVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFN 471
Query: 232 LWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE 291
+ I + D K L +M SG Y + +Y +A + AE + E
Sbjct: 472 ILIGRMLKQGDFDDAHKCLQKMM-SSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKE 530
Query: 292 KSITQRQWITYDFLIILYAGLG 313
+ + + TY LI Y LG
Sbjct: 531 EGVPPDDF-TYTSLIKAYGKLG 551
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 91/220 (41%), Gaps = 5/220 (2%)
Query: 140 IHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMM 199
+ S R FE +P + +Y L+H A ++A LF R+K N Y ++
Sbjct: 243 VDSAFRVFEEMP--NRNEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALI 300
Query: 200 TLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG 259
+ V K +++E+ +N+VPD+ TYN I+ ++D + L M + G
Sbjct: 301 K-GLCRKNVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMK-ERGL 358
Query: 260 SDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID 319
D Y ++ ++ + A E+ ++ I Y LI Y +G D+
Sbjct: 359 VPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSA-NVIMYSVLIDGYCKVGKVDEAG 417
Query: 320 QIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 359
+++ + + + ++ G+LKE + DQ
Sbjct: 418 CLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQ 457
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 55/277 (19%), Positives = 112/277 (40%), Gaps = 35/277 (12%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
+ Y LL L A ++ +L+ + + +S + +N M+ +Y +G V++ + +
Sbjct: 158 KCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCK 217
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS--------------CDSGGSDDW 263
+ + + PD FT +I + ++D + +EM C++G D+
Sbjct: 218 MIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRNEVSYNQLIHGLCEAGRIDEA 277
Query: 264 VK-YVNL------VNIYITASHL-------VNAESSTLVEAEKSITQRQWITYDFLIILY 309
V +V + N+Y + + V+ L E + ITY+ LI
Sbjct: 278 VSLFVRMKDDCCYPNVYTYTALIKGLCRKNVHKAMGLLDEMLERNLVPDLITYNSLI--- 334
Query: 310 AGLGNKDKIDQIWKSLRMTKQK---MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATS 366
AG +D ++ L + K++ R Y C + ++E + D + S
Sbjct: 335 AGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVS 394
Query: 367 DFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
++ + L+ + VG ++A +L KNC+P
Sbjct: 395 A-NVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSP 430
>gi|125549468|gb|EAY95290.1| hypothetical protein OsI_17116 [Oryza sativa Indica Group]
Length = 608
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 115/263 (43%), Gaps = 38/263 (14%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
A + Y++++ A A + AE+L+ + + + M+ +++ +++ G+VEK
Sbjct: 294 APNATIYSSIIRSLADAHESSAAEDLYNEAWKKGMLGDPDMFLKVIVMHVEAGRVEKTMG 353
Query: 214 VVEE--------------------IKRKNVVPDIFTYNLWIS-SC-------AATLNI-- 243
V ++ +KR+ + P I Y+ I+ C A+ +N+
Sbjct: 354 VAKDMRETGLRVTDCILSTIVNGFVKRRGLKPAIRAYDKLIALGCEPGQVTYASVINVYC 413
Query: 244 -----DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQ 298
D+ + EM D G V Y N++++Y S +A V +K
Sbjct: 414 QLGRSDRAESVFSEM-IDRGFDKCVVAYGNMISMYGKISRASDAMRLLAVMKKKGCEPNI 472
Query: 299 WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 358
W+ Y+ L+ ++ LGN + ++IWK + K + +Y I++++ G L ++
Sbjct: 473 WV-YNSLLDMHGRLGNSRQAEKIWKEMMRRKIQPDRISYTAIINAFNRSGELDRCMDLYQ 531
Query: 359 QWKQSATSDFDISACNRLLGAFS 381
+++++ D + ++G FS
Sbjct: 532 EFRETG-GKVDTALAGLMVGVFS 553
>gi|326516644|dbj|BAJ92477.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518576|dbj|BAJ88317.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 867
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 137/333 (41%), Gaps = 30/333 (9%)
Query: 70 RSATNVIQRWVSEG---NQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSD 126
R A V++R + +G + ATVS L LK + S H E+ + + H LS
Sbjct: 303 REALAVVRRMLEQGILPDAATVSSL---LKSVANSGSLGHGTEVHCFFLRHG---LSPDA 356
Query: 127 YA--TRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVK 184
Y +D+ K + +R F+GL + T+ +L+ +A A ++A EL E +K
Sbjct: 357 YTGTALVDMYAKCGRLDIAQRVFDGL--EHRNLATWNSLVAGHANAGHFDRALELVEAMK 414
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
+ + N +N ++T Y G + L++ +IK V P++ ++ IS +
Sbjct: 415 RHRIDPNVTTWNGLITGYAMNGLSSQAMLLLRQIKSAGVAPNVVSWTSLISGSCNGGDYQ 474
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 304
F EM D G V + L+ + L + ++ + +
Sbjct: 475 DSFTFFSEMQQD-GIQPSLVTMLVLLRACAGLALLTKGKELHCFALRRAYDG-EVVVSTA 532
Query: 305 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC---ILSSYLMLGHLKEVGEII-DQW 360
LI +YA G+ +++ ++ +N +C +L+ + G E + D W
Sbjct: 533 LIDMYAKAGSLTSAKRVFG-------RVQGKNLVCCNAMLTGLAVHGQAHEAAALFHDMW 585
Query: 361 KQSATSD-FDISACNRLLGAFSDVGLTEKANEF 392
+ D +A LL A +GL +A E+
Sbjct: 586 RSGLKPDGITFTA---LLTACRSMGLVTEAWEY 615
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 83/184 (45%), Gaps = 9/184 (4%)
Query: 161 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 220
TAL+ +YA A A+ +F RV+ NL + N M+T GQ + A + ++ R
Sbjct: 531 TALIDMYAKAGSLTSAKRVFGRVQGKNL----VCCNAMLTGLAVHGQAHEAAALFHDMWR 586
Query: 221 KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLV 280
+ PD T+ +++C + + + ++LD+M G + + +V++ +L
Sbjct: 587 SGLKPDGITFTALLTACRSMGLVTEAWEYLDDMEAKYGVAPTAEHHACMVDLLARRGYLD 646
Query: 281 NAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICI 340
A + E+S + ++ L+ A GN D + + L + S NY+ +
Sbjct: 647 EA----MAFIERSPAEPGASSWGALLTGCAIHGNLDLAESAARHL-FKLEPHNSANYLAM 701
Query: 341 LSSY 344
+S Y
Sbjct: 702 MSLY 705
>gi|297830178|ref|XP_002882971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328811|gb|EFH59230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 642
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 117/278 (42%), Gaps = 6/278 (2%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVK 184
Y T + + KV + FE + + + T TYT L+ A E+A +L++ +
Sbjct: 271 YTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNML 330
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC-AATLNI 243
L+ + + N +M + VG++E++ V E+ P + +YN I + + +
Sbjct: 331 TDGLTPDVVFLNNLMNILGKVGRLEELTNVFNEMGTWRCTPTVVSYNTVIKALFESKAPV 390
Query: 244 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 303
+V + D+M D G S Y L++ Y + + A L E ++ Y
Sbjct: 391 SEVSSWFDKMKAD-GVSPSEFTYSILIDGYCKTNRVEKA-LLLLEEMDEKGFPPCPAAYC 448
Query: 304 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 363
LI + ++++K L+ ++SR Y ++ + G L E ++ ++ K
Sbjct: 449 SLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQ 508
Query: 364 ATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 401
+ D+ A N L+ G+ +AN + + C
Sbjct: 509 GSGP-DVYAYNALMSGMVKAGMVNEANSLLRKMEENGC 545
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY+AL+ Y + A LF+ +K + + +Y ++ +Y VG+VEK + EE+
Sbjct: 235 TYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEM 294
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 272
KR P ++TY I +++ M D G + D V NL+NI
Sbjct: 295 KRAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTD-GLTPDVVFLNNLMNI 347
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 122/290 (42%), Gaps = 20/290 (6%)
Query: 73 TNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSD--YATR 130
TNV + TV ++K L +S+ E+S W K +S S+ Y+
Sbjct: 358 TNVFNEMGTWRCTPTVVSYNTVIKALFESK--APVSEVSSWFDKMKADGVSPSEFTYSIL 415
Query: 131 IDLMTKVFGIHSGERYFE-----GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQ 185
ID K + E G P Y +L++ AK E A ELF+ +K+
Sbjct: 416 IDGYCKTNRVEKALLLLEEMDEKGFP---PCPAAYCSLINALGKAKRYEAANELFKELKE 472
Query: 186 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 245
+ + ++ +Y M+ + G++ + + E+K + PD++ YN +S +++
Sbjct: 473 NFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMVNE 532
Query: 246 VKKFLDEMSCDSGGSDDWVKYVNLVNIYIT--ASHLVNAESSTLVEAEKSI-TQRQWITY 302
L +M ++G + D +N NI + A V + + E K + +TY
Sbjct: 533 ANSLLRKME-ENGCTAD----INSHNIILNGFARTGVPRRAIEMFETMKHCGIKPDGVTY 587
Query: 303 DFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 352
+ L+ +A G ++ ++ + ++ + + Y IL + + H K+
Sbjct: 588 NTLLGCFAHAGMFEEAARLMREMKDKGFEYDAITYSSILDAVGNMDHEKD 637
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 84/210 (40%), Gaps = 12/210 (5%)
Query: 163 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI-KRK 221
L+ AK KA +F + K + YN ++ + M GQ EKV V E+
Sbjct: 168 LVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEG 227
Query: 222 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 281
+ PD TY+ ISS D + DEM + + + Y L+ IY +
Sbjct: 228 DCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKI-YTTLLGIYFKVGKVEK 286
Query: 282 AESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQ---IWKSL---RMTKQKMTSR 335
A E +++ TY LI GLG ++++ ++K++ +T +
Sbjct: 287 A-LDLFEEMKRAGCSPTVYTYTELI---KGLGKAGRVEEAYDLYKNMLTDGLTPDVVFLN 342
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSAT 365
N + IL L L V + W+ + T
Sbjct: 343 NLMNILGKVGRLEELTNVFNEMGTWRCTPT 372
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 74/138 (53%), Gaps = 5/138 (3%)
Query: 136 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 195
K F +H E +G+ T TYT+L+++ + + A++LFE++ + S + +M+
Sbjct: 429 KAFNLHD-EMISKGI---QPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMF 484
Query: 196 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 255
N ++ + + G +++ +++E+ ++N+VPD TYN + +++ ++ L EM
Sbjct: 485 NALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMK- 543
Query: 256 DSGGSDDWVKYVNLVNIY 273
G D + Y L++ Y
Sbjct: 544 RRGIRPDHISYNTLISGY 561
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
S TY +L+ E+A + E++K+ L A+ YN ++ Y + G + K +
Sbjct: 306 SYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRD 365
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
E+ R+ ++P + TYNL I + +D+ + +M DSG D + Y L+N Y
Sbjct: 366 EMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMG-DSGIVPDSITYNILINGY 421
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 57/289 (19%), Positives = 111/289 (38%), Gaps = 40/289 (13%)
Query: 152 LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 211
L K+S + L+ K + A E F+ +K+ + +N M++L++ + Q E V
Sbjct: 161 LGTKSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETV 220
Query: 212 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
++ E+ R + ++T+N+ I+ + + K F+ M + G + V Y +++
Sbjct: 221 WVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSME-NLGVKPNVVTYNTVIH 279
Query: 272 IYITASHLVNA---------------------------------ESSTLVEAEKSIT-QR 297
Y + + A E+S ++E K I
Sbjct: 280 GYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLP 339
Query: 298 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM--TSRNYICILSSYLMLGHLKEVGE 355
+TY+ LI Y G D + M ++ + T Y ++ + + G + E
Sbjct: 340 TAVTYNTLIDGYCNKG--DLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADG 397
Query: 356 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 404
+I S I+ N L+ + G +KA H ++ K PT
Sbjct: 398 MIKDMGDSGIVPDSITY-NILINGYCRCGNAKKAFNLHDEMISKGIQPT 445
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 48/94 (51%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
+ AL+ + ++A L + + + N+ + + YN +M G+VE+ +++E+K
Sbjct: 484 FNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMK 543
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
R+ + PD +YN IS + +I+ DEM
Sbjct: 544 RRGIRPDHISYNTLISGYSKRGDINDAFTIRDEM 577
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 108/275 (39%), Gaps = 41/275 (14%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT+++ +K E+A +LF+ ++Q ++ N +MY ++ Y G+V + L++E++
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKM 558
Query: 219 KRKNVVPDIFTYNLWISSCA---------------------ATLNIDQV----------- 246
KN +P+ T+N I T++ D +
Sbjct: 559 LSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDF 618
Query: 247 ----KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 302
++F +S SG D Y + Y L +AE E ++ TY
Sbjct: 619 DHAYRRFQQMLS--SGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSP-DLFTY 675
Query: 303 DFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ 362
LI Y LG + + K + T + + ++ ++ L + + K G
Sbjct: 676 SSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVM 735
Query: 363 SATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 397
S +FDI LL + G+T A + L+L
Sbjct: 736 SNMMEFDIVV--ELLEKMVEHGVTPNAKSYEKLML 768
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 94/244 (38%), Gaps = 3/244 (1%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y LL+ A ++ ++++ + + + N YN+M+ Y VG VE+ V I
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIV 245
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
+ PD FTY I ++D K EM G + V Y +L++ +
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPL-KGCRRNEVAYTHLIH-GLCVERR 303
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 339
++ V+ + TY LI G K + + K + K Y
Sbjct: 304 IDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTV 363
Query: 340 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 399
++ S L++ E++ Q + ++ N L+ + G+ E A + L+ +
Sbjct: 364 LIDSLCSQCKLEKARELLGQMLEKGLMP-NVITYNALINGYCKRGMIEDALDVVELMESR 422
Query: 400 NCAP 403
N P
Sbjct: 423 NLRP 426
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 129/344 (37%), Gaps = 60/344 (17%)
Query: 71 SATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATR 130
SA V + +G + H++ L +R A+++ V K+ D Y T
Sbjct: 271 SAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDL---FVKMKD----DDCYPTV 323
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKTSE--------TYTALLHLYAGAKWTEKAEELFER 182
+ + ER E L L + E TYT L+ EKA EL +
Sbjct: 324 RTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQ 383
Query: 183 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 242
+ + L N + YN ++ Y G +E VVE ++ +N+ P+ TYN I N
Sbjct: 384 MLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKG-YCKRN 442
Query: 243 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 302
+ + L++M + D V Y +L++ + + +A + ++ + W TY
Sbjct: 443 VHKAMGVLNKM-LERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPW-TY 500
Query: 303 DFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ 362
+ ID + KS R ++E ++ D +Q
Sbjct: 501 TSM------------IDSLCKSKR-----------------------VEEACDLFDSLEQ 525
Query: 363 SATSDFDISACNRLLGAFSDVGLTEKANEFHMLL---LQKNCAP 403
++ L+ + G K NE H++L L KNC P
Sbjct: 526 KDVIP-NVVMYTALIDGYCKAG---KVNEAHLMLEKMLSKNCLP 565
>gi|387193283|gb|AFJ68696.1| hypothetical protein NGATSA_2008400, partial [Nannochloropsis
gaditana CCMP526]
Length = 501
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 114/276 (41%), Gaps = 14/276 (5%)
Query: 117 HKEFVLSDSDYATRIDLMTKV-FGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEK 175
H F D +AT ++L +V G G R T T AL +G KW +
Sbjct: 94 HAMFACLDRHWATALELFHEVESGAVPGVRM--------DTGTTMAALGACRSGKKW-QL 144
Query: 176 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
A + E + + + +++N ++ +Y + Q KV +EE++ V PD FTYN I
Sbjct: 145 ASAILESARAQEVELSLVLFNAVLGVYAAAQQTGKVLETLEEMRFLGVRPDEFTYNTAIG 204
Query: 236 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 295
+ A + Q ++L M+ + G S V Y +N + A + E
Sbjct: 205 AFAKVGDYRQAGQWLSIMTWE-GVSASTVTYNCALNACANGGNPQRA-AELFQEMRDRKV 262
Query: 296 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI-CILSSYLMLGHLKEVG 354
+TY L+ +A G + + +R + + N++ C S G+ E+
Sbjct: 263 GVDHVTYGTLVHAFAKAGQWEGALRYLDEMRQSTSGIKPNNFVYCSAMSACNRGNESEMA 322
Query: 355 -EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
+++DQ ++ D + N L A + GL +A
Sbjct: 323 LKLLDQMREVDGLVPDQYSVNEALNACAKGGLCARA 358
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 107/248 (43%), Gaps = 9/248 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT L+ A +KA+EL+ +++ S+ + + Y +M+ + + G +E V E+
Sbjct: 299 TYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEM 358
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ PD+ TY + + + + +DQ LD M G + Y L++ +
Sbjct: 359 EADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRV-RGIVPNLHTYNTLISGLLNLRR 417
Query: 279 LVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
L E+ L +S+ +Y I Y LG+ +K ++ +M K+ +
Sbjct: 418 L--DEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFE--KMKKRGIMPSIA 473
Query: 338 ICILSSYLM--LGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 395
C S Y + +G ++E +I + S D N ++ +S G +KA +
Sbjct: 474 ACNASLYSLAEMGRIREAKDIFNDIHNCGLSP-DSVTYNMMMKCYSKAGQIDKATKLLTE 532
Query: 396 LLQKNCAP 403
+L + C P
Sbjct: 533 MLSEGCEP 540
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 98/237 (41%), Gaps = 5/237 (2%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLP-- 151
I+ L KS AL++ + + +F + Y I + K + FE +P
Sbjct: 864 IISALVKSNSINKALDLY-YEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDY 922
Query: 152 LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 211
Y L++ + A A +LF+R+ + + + Y ++ G+V+
Sbjct: 923 QCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDA 982
Query: 212 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
EE+K + PD +YNL I+ + +++ EM + G S + Y L+
Sbjct: 983 VHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMK-NRGISPELYTYNALI- 1040
Query: 272 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 328
++ + +V+ E + + TY+ LI ++ GNKD+ ++K + +
Sbjct: 1041 LHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIV 1097
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 90/217 (41%), Gaps = 11/217 (5%)
Query: 148 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 207
EGL S KT Y+AL+ + T +L E ++ L N Y + + G+
Sbjct: 221 EGLKPSMKT---YSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGR 277
Query: 208 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 267
++ +++ ++ + PD+ TY + I + A +D+ K+ +M S D V Y+
Sbjct: 278 IDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASS-HKPDLVTYI 336
Query: 268 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 327
L++ + L + E E +TY IL L K+DQ + L +
Sbjct: 337 TLMSKFGNYGDLETVK-RFWSEMEADGYAPDVVTY---TILVEALCKSGKVDQAFDMLDV 392
Query: 328 TKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQWK 361
+ + N Y ++S L L L E E+ + +
Sbjct: 393 MRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNME 429
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 71/166 (42%), Gaps = 7/166 (4%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
A T+ +Y + Y EKA + FE++K+ + + N + +G++ +
Sbjct: 434 APTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKD 493
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
+ +I + PD TYN+ + + ID+ K L EM G D + +L++
Sbjct: 494 IFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEM-LSEGCEPDIIVVNSLIDTL 552
Query: 274 ITASHLVNAESSTLVEAEKSIT-QRQWITYDFLIILYAGLGNKDKI 318
A + E+ + K + +TY+ LI GLG + K+
Sbjct: 553 YKAGRV--DEAWQMFGRLKDLKLAPTVVTYNILI---TGLGKEGKL 593
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 13/114 (11%)
Query: 132 DLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFN 191
D TK G H T E+Y L+ G TE A +LF +K + N
Sbjct: 776 DKFTKSLGTHP-------------TPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPN 822
Query: 192 ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 245
YN ++ + +++++ + E+ + P+I T+N+ IS+ + +I++
Sbjct: 823 IFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINK 876
Score = 38.1 bits (87), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 37/199 (18%), Positives = 76/199 (38%), Gaps = 2/199 (1%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
+ TY + + +A +++Q+ NA YN ++ + G ++ V
Sbjct: 155 RNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKV 214
Query: 215 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274
+ + + + P + TY+ + + + + L+EM G + Y + +
Sbjct: 215 YKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEME-TLGLRPNIYTYTICIRVLG 273
Query: 275 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 334
A + +A L E +TY LI G DK +++ +R + K
Sbjct: 274 RAGRIDDA-YGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDL 332
Query: 335 RNYICILSSYLMLGHLKEV 353
YI ++S + G L+ V
Sbjct: 333 VTYITLMSKFGNYGDLETV 351
>gi|449511130|ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 847
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/371 (19%), Positives = 152/371 (40%), Gaps = 19/371 (5%)
Query: 46 DEETSNSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQ--- 102
D N K ++ +FR SL R +IQ S N+ ELR++++ L Q
Sbjct: 161 DPGQGNDCKKVEIGEDVFRHSLV-RDTCKLIQ-LSSSWNRKFEGELRYLVRSLNPLQVCA 218
Query: 103 ------RYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLS--A 154
++AL W + S Y +++++K +R +
Sbjct: 219 VLLSQEDERNALRFFYWADRLWRYRHDSSVYLVMLEILSKTKLCQGAKRILRLMTRRRIQ 278
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
E + ++ Y+ A A ++ ++++ + N + N + + + +++K
Sbjct: 279 LCPEAFGFVMVSYSRAGRLRDAMKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRF 338
Query: 215 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274
E + + P++ TYN I +DQ + +D+M G S D V Y ++ +
Sbjct: 339 AERMVLIGIAPNVVTYNCLIKGYCNVHQVDQAMELIDQMP-SKGCSPDKVSYYTVMGLLC 397
Query: 275 TASHLVNAESSTLVEAEKSITQ--RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 332
L E L++ ++ ++ +TY+ LI + + G+ D+ +I + + K+
Sbjct: 398 RDKRL--NEIRELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKV 455
Query: 333 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
Y I+ +Y G +++ E++ + S D D+ +L F +G ++A +
Sbjct: 456 DKVEYSAIVHAYCKEGKIQKAKELVSEM-FSKGCDPDVVTYTSVLDGFCRIGKLDQAKKM 514
Query: 393 HMLLLQKNCAP 403
+ + +C P
Sbjct: 515 MQQMYKHHCKP 525
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 116/282 (41%), Gaps = 17/282 (6%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSA-KTSET-YTALLHLYAGAKWTEKAEELFERVK 184
Y+ ID + K I F L K +E YTAL+ Y A + A L +R+
Sbjct: 252 YSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRML 311
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
+ N+ YN ++ +V++ L++E + +K + + TY + I + + D
Sbjct: 312 TEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFD 371
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 304
+ LD+M SG D Y ++ + T ++ AE + E+ + +TY
Sbjct: 372 YAHRILDQMV-SSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMP-DALTYTL 429
Query: 305 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
+I Y GLG + + K + T + Y C++ LKE E+ ++K A
Sbjct: 430 VIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHL-----LKE--ELTKKYKNVA 482
Query: 365 TSDFDISACNRLLGAFSDVGLT---EKANEFHMLLLQKNCAP 403
D S N +DV E A E +L+ C+P
Sbjct: 483 LCD---SIPNVFFADVADVWKMMKFETALELFEKMLEHGCSP 521
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 46/238 (19%), Positives = 85/238 (35%), Gaps = 45/238 (18%)
Query: 127 YATRIDLMTKVFGIHSGERYFE-----GLPLSAKTSETYTALLHLYAGAKWTEKAEELFE 181
Y I+ M K + G R + GL + TY AL+ Y E A+E+ +
Sbjct: 112 YTVMINAMCKETKLEEGRRILDEMVEKGL---VPSVPTYNALIDGYCKEGMVEAAQEILD 168
Query: 182 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL 241
+ ++ + N YNE++ + V + ++ ++ + P + TYN I
Sbjct: 169 LMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHG----- 223
Query: 242 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWIT 301
C G D + +NL+N E + QW T
Sbjct: 224 ------------QCKIGYLDSAYRLLNLMN-------------------ENGVVPDQW-T 251
Query: 302 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 359
Y I G ++ + ++ SL+ K Y ++ Y G + + ++D+
Sbjct: 252 YSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDR 309
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 101/251 (40%), Gaps = 25/251 (9%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+YT L+H ++ +F+++++ + Y ++ G+ + + E+
Sbjct: 41 SYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEM 100
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + P+I TY + I++ +++ ++ LDEM + G Y L++ Y
Sbjct: 101 RERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMV-EKGLVPSVPTYNALIDGYCKEG- 158
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL------RMTKQKM 332
+V A L + TY+ LI G K + + L R+T +
Sbjct: 159 MVEAAQEILDLMHSNSCNPNERTYNELI---CGFCRKKNVHRAMALLSKMLESRLTPSVV 215
Query: 333 TSRNYI---CIL----SSYLMLGHLKEVGEIIDQWKQSATSDF-----DISACNRLLGAF 380
T + I C + S+Y +L + E G + DQW S D I N L +
Sbjct: 216 TYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSL 275
Query: 381 SDVGLTEKANE 391
+ G+ KANE
Sbjct: 276 KEKGI--KANE 284
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 91/211 (43%), Gaps = 23/211 (10%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY AL++ A E+A ELF+ + L+ NA+ Y ++ Y G + K + +E+
Sbjct: 693 TYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEM 752
Query: 219 KRKNVVPDIFTYNLWISSC--------AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 270
K V PD F Y+ I C A +L ++ V+K S + D + K ++
Sbjct: 753 TLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVI 812
Query: 271 NIYITASHLVNAESSTLVE--AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 328
E++ L+E +K + + +TY LI + G + +Q + ++
Sbjct: 813 ------------EANQLLEDMVDKHV-KPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKR 859
Query: 329 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 359
+ Y +LS Y M G E+ + D+
Sbjct: 860 NLMPNALTYTALLSGYNMAGRRSEMFALFDE 890
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 96/230 (41%), Gaps = 3/230 (1%)
Query: 174 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 233
E A +FE + + NA++Y ++ ++ G+ ++ +++ + +K V PD+ YN
Sbjct: 463 EDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSV 522
Query: 234 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 293
I + +++ K +L EM + G + Y L++ Y + + A+ E
Sbjct: 523 IIGLCKSRKMEEAKDYLVEM-IERGLKPNVYTYGALIHGYCKSGEMQVAD-RYFKEMLGC 580
Query: 294 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 353
+ LI Y G+ + I++ + R Y ++ L G L+
Sbjct: 581 GIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGA 640
Query: 354 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
E++ ++ + D+ N ++ F G KA + H + QK +P
Sbjct: 641 MELLSEFLEKGLVP-DVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISP 689
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 139/344 (40%), Gaps = 15/344 (4%)
Query: 70 RSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDS--DY 127
+ A +++ +G Q V ++ L KS++ + A +++V E L + Y
Sbjct: 498 QEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEA---KDYLVEMIERGLKPNVYTY 554
Query: 128 ATRIDLMTKVFGIHSGERYFE---GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVK 184
I K + +RYF+ G + A TAL+ Y T +A +F +
Sbjct: 555 GALIHGYCKSGEMQVADRYFKEMLGCGI-APNDVVCTALIDGYCKEGSTTEATSIFRCML 613
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
++ + Y+ ++ + G+++ ++ E K +VPD+FTYN IS I
Sbjct: 614 GRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIG 673
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 304
+ + L E C G S + + Y L+N A + A K + +TY
Sbjct: 674 KAFQ-LHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNA-VTYAT 731
Query: 305 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
+I Y GN K +++ + + S Y ++ G+ ++ + + +S
Sbjct: 732 IIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKA---LSLFLESV 788
Query: 365 TSDF-DISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
F S+ N L+ F G +AN+ ++ K+ P + +
Sbjct: 789 QKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVT 832
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 92/209 (44%), Gaps = 10/209 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT L++ + A ++ + L +++ S + + YN ++ G+V++ + + +
Sbjct: 238 TYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLM 297
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+K +V D+FTY++ I + K L+EM G V Y L++ ++
Sbjct: 298 DKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMF-SKGLKPGHVAYTALIDGFMR--- 353
Query: 279 LVNAESSTLVEAEKSITQR----QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 334
+S ++ + R TY+ L+ G+ +K D + + M K +
Sbjct: 354 --QGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDT 411
Query: 335 RNYICILSSYLMLGHLKEVGEIIDQWKQS 363
+ Y ++ YL + V +++ + K+S
Sbjct: 412 QTYNNMIEGYLKEQNTSRVKDLLSEMKKS 440
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 78/169 (46%), Gaps = 6/169 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT L+ + + ++AE+ F +++ NL NAL Y +++ Y G+ ++ + +E+
Sbjct: 832 TYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEM 891
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVK--KFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
K++ PD T+++ I A D VK K +D+M G V +V L++
Sbjct: 892 IAKDIEPDGVTWSVMID--AHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHV-LIDPLCRK 948
Query: 277 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 325
H V+ L + E+ T L+ + G D ++ KS+
Sbjct: 949 EH-VSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSM 996
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 96/248 (38%), Gaps = 9/248 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY AL+ EKA+ L + + + YN M+ Y+ +V ++ E+
Sbjct: 378 TYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEM 437
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K+ N+VP +T + I+ +I+ + E+ G + V Y L+ ++
Sbjct: 438 KKSNLVPTAYTCGMIINGLCRHGSIEDASRVF-EIMVSLGVKPNAVIYTTLIKGHVQEGR 496
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN-- 336
A V +K + Q + Y+ +II GL K+++ L ++ N
Sbjct: 497 FQEAVRILKVMDKKGV-QPDVLCYNSVII---GLCKSRKMEEAKDYLVEMIERGLKPNVY 552
Query: 337 -YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 395
Y ++ Y G ++ + + D+ C L+ + G T +A
Sbjct: 553 TYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDV-VCTALIDGYCKEGSTTEATSIFRC 611
Query: 396 LLQKNCAP 403
+L ++ P
Sbjct: 612 MLGRSVHP 619
>gi|326509061|dbj|BAJ86923.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 866
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 13/193 (6%)
Query: 70 RSATNVIQRWVSEG---NQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSD 126
R A V++R + +G + ATVS L LK + S H E+ + + H LS
Sbjct: 302 REALAVVRRMLEQGILPDAATVSSL---LKSVANSGSLGHGTEVHCFFLRHG---LSPDA 355
Query: 127 YA--TRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVK 184
Y +D+ K + +R F+GL + T+ +L+ +A A ++A EL E +K
Sbjct: 356 YTGTALVDMYAKCGRLDIAQRVFDGL--EHRNLATWNSLVAGHANAGHFDRALELVEAMK 413
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
+ + N +N ++T Y G + L++ +IK V P++ ++ IS +
Sbjct: 414 RHRIDPNVTTWNGLITGYAMNGLSSQAMLLLRQIKSAGVAPNVVSWTSLISGSCNGGDYQ 473
Query: 245 QVKKFLDEMSCDS 257
F EM D
Sbjct: 474 DSFTFFSEMQQDG 486
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 85/184 (46%), Gaps = 9/184 (4%)
Query: 161 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 220
TAL+ +YA A A+ +F RV+ NL + N M+T GQ + A + ++ R
Sbjct: 530 TALIDMYAKAGSLTSAKRVFGRVQGKNL----VCCNAMLTGLAVHGQAHEAAALFHDMWR 585
Query: 221 KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLV 280
+ PD T+ +++C + + + ++LD+M G + + +V++ +L
Sbjct: 586 SGLKPDGITFTALLTACRSMGLVTEAWEYLDDMEAKYGVAPTAEHHACMVDLLARRGYL- 644
Query: 281 NAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICI 340
E+ T + E+S + ++ L+ A GN D + + L + S NY+ +
Sbjct: 645 -DEAMTFI--ERSPAEPGASSWGALLTGCAIHGNLDLAESAARHL-FKLEPHNSANYLAM 700
Query: 341 LSSY 344
+S Y
Sbjct: 701 MSLY 704
>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
Length = 757
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 136/330 (41%), Gaps = 30/330 (9%)
Query: 68 PKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDY 127
P N++ + + +A + E HI ++R+ + +S +VT Y
Sbjct: 340 PDHHIFNIM--FCAYAKKAMIDEAMHIFDKMRQQR-------LSPNIVT----------Y 380
Query: 128 ATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLH-LYAGAKWTEKAEELFERVK 184
ID + K+ + F + T + +++L++ L KW EKAEELF V
Sbjct: 381 GALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKW-EKAEELFFEVL 439
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
+ + + +N +M G+V + +++ + R V PD+ +YN + T ID
Sbjct: 440 DQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRID 499
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 304
+ K LD + G D V Y L++ Y A + +A S K +T +TY+
Sbjct: 500 EAAKLLDVI-VSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTP-DVVTYNT 557
Query: 305 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
++ G + +++ S+ ++ +M Y I++ L V E +
Sbjct: 558 ILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIING---LCKNNFVDEAFKMFHSLC 614
Query: 365 TSD--FDISACNRLLGAFSDVGLTEKANEF 392
+ D DI N ++GA G E A +
Sbjct: 615 SKDLQLDIFTANIMIGALLKGGRKEDAMDL 644
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 133/315 (42%), Gaps = 39/315 (12%)
Query: 72 ATNVIQRWVSE-GNQATVSELRHILKELRKSQRYKHALEISEWMV-----THKEFVLSDS 125
AT+++ R + E G V +LK +R + ALE+ M +H V++
Sbjct: 147 ATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVT-- 204
Query: 126 DYATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAG-AKWTEKAEELFER 182
Y T ID + K + + F+ + + TYT L+H Y KW E ++ +
Sbjct: 205 -YTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVV-QMLQE 262
Query: 183 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 242
+ L + +Y ++ G+ + + + + RK + P++ Y + + A +
Sbjct: 263 MSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGS 322
Query: 243 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA----EKSITQR- 297
+ ++ FLD M +G S D ++ NI A A+ + + EA +K QR
Sbjct: 323 LSEMHSFLDLM-VGNGVSPDH----HIFNIMFCAY----AKKAMIDEAMHIFDKMRQQRL 373
Query: 298 --QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 355
+TY LI LG D D + K +M + MT ++ S L+ G
Sbjct: 374 SPNIVTYGALIDALCKLGRVD--DAVLKFNQMIDEGMTPDIFV---FSSLVYGLCT---- 424
Query: 356 IIDQWKQSATSDFDI 370
+D+W+++ F++
Sbjct: 425 -VDKWEKAEELFFEV 438
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 100/252 (39%), Gaps = 15/252 (5%)
Query: 162 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 221
LLH +A T+ + F+ + + YN M+ G +E + + EE+K +
Sbjct: 103 GLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFR 162
Query: 222 NVVPDIFTYNLWISSCAATLNIDQVKKFLDE---MSCDSGGSDDWVKYVNLVNIYITASH 278
++PD TYN I +D F +E MSC+ D + Y L+N +
Sbjct: 163 GLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEP----DVITYNTLINCFCKFGK 218
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK---SLRMTKQKMTSR 335
L E ++S + ++Y L+ + +D + Q K +R
Sbjct: 219 LPKG-LEFFREMKQSGLKPNVVSYSTLVDAFC---KEDMMQQALKFYVDMRRLGLVPNEH 274
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 395
Y ++ +Y +G+L + + D+ Q ++++ L+ DV ++A E
Sbjct: 275 TYTSLVDAYCKIGNLSDAFRLADEMSQVGV-EWNVVTYTALIDGLCDVERIKEAEELFGK 333
Query: 396 LLQKNCAPTNAS 407
++ P AS
Sbjct: 334 MVTAGVIPNLAS 345
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 67/162 (41%), Gaps = 2/162 (1%)
Query: 153 SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVA 212
S T TY ++ E A LFE +K L + + YN M+ Y VG+++
Sbjct: 129 SKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTV 188
Query: 213 LVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 272
EE+K + PD+ TYN I+ + + +F EM SG + V Y LV+
Sbjct: 189 YFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMK-QSGLKPNVVSYSTLVDA 247
Query: 273 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 314
+ + A + + + TY L+ Y +GN
Sbjct: 248 FCKEDMMQQALKFYVDMRRLGLVPNEH-TYTSLVDAYCKIGN 288
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYTAL+ + ++AEELF ++ + + N Y ++ ++ +++ +++E+
Sbjct: 310 TYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEM 369
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274
K + + PD+ Y +I S I+ K ++EM + G + Y L++ Y
Sbjct: 370 KGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQ-EKGIKANTFIYTTLMDAYF 424
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 184
Y ID + V I E F + + +YTAL+H + AK ++A EL + +K
Sbjct: 311 YTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMK 370
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 236
+ + L+Y + + ++E +V+ E++ K + + F Y + +
Sbjct: 371 GRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDA 422
>gi|449518091|ref|XP_004166077.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g23020-like [Cucumis sativus]
Length = 859
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 9/146 (6%)
Query: 151 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 210
P + ++ TY L+ Y A ++A FE + + +S + +N M+ + + GQ+++
Sbjct: 311 PHVSLSTYTYNTLIDTYGKAGQLKEASTTFENMLKEGVSPTTVTFNTMIHICGNHGQLKE 370
Query: 211 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 270
V ++++++ PD TYN+ IS A NID + EM ++G D V Y L+
Sbjct: 371 VTFLMQKMEELQCPPDTRTYNILISLYAKHDNIDLASNYFAEME-EAGLQPDIVSYRTLL 429
Query: 271 NIYITASHLVNAESSTLVEAEKSITQ 296
Y + H+V EAEK IT+
Sbjct: 430 YAY-SIRHMV-------AEAEKLITE 447
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 102/248 (41%), Gaps = 5/248 (2%)
Query: 122 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAK-TSETYTALLHLYAGAKWTEKAEELF 180
+S Y+ ID + I ER F K T + ++ Y K KA+++F
Sbjct: 489 MSSECYSANIDAYGERGFILEAERVFVSCQEEKKCTVLEFNVMIKAYGVVKDYAKAQKIF 548
Query: 181 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 240
+ +K + + + Y+ ++ + +++++ +V D Y++ ISS +
Sbjct: 549 DSMKSNGVVPDKCSYSSLIQILTGADMPAMALAYLKKMQSAGLVSDCIPYSVVISSFSKL 608
Query: 241 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA-EKSITQRQW 299
+++ K EM G D + Y L+N + A + E+ V A ++
Sbjct: 609 GHLEMADKLYREM-VKHGVQPDIIVYGVLINAFADAGSV--KEAINYVNAMKRDGLSGNT 665
Query: 300 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 359
+ Y+ LI LY +G + + +K L T + C++ Y +KE EI +
Sbjct: 666 VIYNSLIKLYTKVGYLKEAHEAYKMLEQTDDGPAIYSSNCMIDLYSERSMVKEAEEIFES 725
Query: 360 WKQSATSD 367
K+ ++
Sbjct: 726 LKKKGEAN 733
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKTSE-TYTALLHLYAGAKWTEKAEELFERVKQSNLS 189
IDL ++ + E FE L + +E T+ +L +Y ++A + ++K+ L
Sbjct: 707 IDLYSERSMVKEAEEIFESLKKKGEANEFTFAMMLCMYKKIGRIQEAICVARQMKEQGLL 766
Query: 190 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 230
+ L +N M++LY G+ ++ + +E+ + V PD TY
Sbjct: 767 SDLLSFNNMISLYAMDGRFKEAVSIFQEMMKAAVQPDECTY 807
>gi|449457361|ref|XP_004146417.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Cucumis sativus]
Length = 858
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 9/146 (6%)
Query: 151 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 210
P + ++ TY L+ Y A ++A FE + + +S + +N M+ + + GQ+++
Sbjct: 310 PHVSLSTYTYNTLIDTYGKAGQLKEASTTFENMLKEGVSPTTVTFNTMIHICGNHGQLKE 369
Query: 211 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 270
V ++++++ PD TYN+ IS A NID + EM ++G D V Y L+
Sbjct: 370 VTFLMQKMEELQCPPDTRTYNILISLYAKHDNIDLASNYFAEME-EAGLQPDIVSYRTLL 428
Query: 271 NIYITASHLVNAESSTLVEAEKSITQ 296
Y + H+V EAEK IT+
Sbjct: 429 YAY-SIRHMV-------AEAEKLITE 446
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 102/248 (41%), Gaps = 5/248 (2%)
Query: 122 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAK-TSETYTALLHLYAGAKWTEKAEELF 180
+S Y+ ID + I ER F K T + ++ Y K KA+++F
Sbjct: 488 MSSECYSANIDAYGERGFILEAERVFVSCQEEKKCTVLEFNVMIKAYGVVKDYAKAQKIF 547
Query: 181 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 240
+ +K + + + Y+ ++ + +++++ +V D Y++ ISS +
Sbjct: 548 DSMKSNGVVPDKCSYSSLIQILTGADMPAMALAYLKKMQSAGLVSDCIPYSVVISSFSKL 607
Query: 241 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA-EKSITQRQW 299
+++ K EM G D + Y L+N + A + E+ V A ++
Sbjct: 608 GHLEMADKLYREM-VKHGVQPDIIVYGVLINAFADAGSV--KEAINYVNAMKRDGLSGNT 664
Query: 300 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 359
+ Y+ LI LY +G + + +K L T + C++ Y +KE EI +
Sbjct: 665 VIYNSLIKLYTKVGYLKEAHEAYKMLEQTDDGPAIYSSNCMIDLYSERSMVKEAEEIFES 724
Query: 360 WKQSATSD 367
K+ ++
Sbjct: 725 LKKKGEAN 732
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKTSE-TYTALLHLYAGAKWTEKAEELFERVKQSNLS 189
IDL ++ + E FE L + +E T+ +L +Y ++A + ++K+ L
Sbjct: 706 IDLYSERSMVKEAEEIFESLKKKGEANEFTFAMMLCMYKKIGRIQEAICVARQMKEQGLL 765
Query: 190 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 230
+ L +N M++LY G+ ++ + +E+ + V PD TY
Sbjct: 766 SDLLSFNNMISLYAMDGRFKEAVSIFQEMMKAAVQPDECTY 806
>gi|356533316|ref|XP_003535211.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 918
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 96/219 (43%), Gaps = 14/219 (6%)
Query: 152 LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 211
L + + TY ++++ + ++AE L ++ + +Y+ MM Y +G EK
Sbjct: 374 LPSLNAVTYGSIIYAHCQTCNMDRAEALVREMEVQGIDAPIDIYHTMMDGYTMIGNEEKC 433
Query: 212 ALVVEEIKRKNVVPDIFTY----NLW--ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVK 265
+V + +K P + +Y NL+ I + L I ++ K SG +
Sbjct: 434 LIVFDRLKECGFSPSVISYGCLINLYTKIGKVSKALQISKMMKM-------SGIKHNMKT 486
Query: 266 YVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 325
Y L+N ++ NA S + K + + Y+ +I + G+ N D+ + K +
Sbjct: 487 YSMLINGFLKLKDWANA-FSVFEDFTKDGLKPDVVLYNNIITAFCGMSNMDRAICMVKQM 545
Query: 326 RMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
+ + + T+R ++ I+ + G ++ EI D ++S
Sbjct: 546 QKERYRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSG 584
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 116/277 (41%), Gaps = 18/277 (6%)
Query: 118 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEK 175
KE+ L YA R D+ H + FE + +S Y++L+H YA + E+
Sbjct: 275 KEYGLMVKYYARRGDM-------HHARQTFESMQARGIEPSSHVYSSLIHAYAVGRDMEE 327
Query: 176 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
A ++K+ + + Y+ ++ + +G+ + +E K K + TY I
Sbjct: 328 ALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGKADAADHWFKEAKEKLPSLNAVTYGSIIY 387
Query: 236 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV---EAEK 292
+ T N+D+ + + EM G D +++ + + ++ E L+ ++
Sbjct: 388 AHCQTCNMDRAEALVREMEVQ--GID---APIDIYHTMMDGYTMIGNEEKCLIVFDRLKE 442
Query: 293 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 352
I+Y LI LY +G K QI K ++M+ K + Y +++ +L L
Sbjct: 443 CGFSPSVISYGCLINLYTKIGKVSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWAN 502
Query: 353 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
+ + + + D+ N ++ AF + ++A
Sbjct: 503 AFSVFEDFTKDGLKP-DVVLYNNIITAFCGMSNMDRA 538
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 80/187 (42%), Gaps = 2/187 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT L+ YA TEKA + F ++ L + Y ++ G+++ V +E+
Sbjct: 626 TYTTLMQGYASLGDTEKAFQYFSVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEM 685
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
KN+ + F YN+ I A ++ + + +M G D Y + VN A
Sbjct: 686 SAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMR-KEGVLPDIHTYTSFVNACCKAGD 744
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ A + + E E + TY LI +A +K ++ +++ + K Y
Sbjct: 745 MQKA-TEIIQEMEAFGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAELKPDKAAYH 803
Query: 339 CILSSYL 345
C+++S L
Sbjct: 804 CLMTSLL 810
>gi|302759176|ref|XP_002963011.1| hypothetical protein SELMODRAFT_438275 [Selaginella moellendorffii]
gi|300169872|gb|EFJ36474.1| hypothetical protein SELMODRAFT_438275 [Selaginella moellendorffii]
Length = 2074
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 6/136 (4%)
Query: 149 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 208
G+P S S TY L+H+YA A+ ++ A EL+ +S L N ++YN ++ Y S G
Sbjct: 1699 GIPFS---SATYAILIHMYAKARDSKAAAELYADYLRSGLEPNLIVYNNVILSYGSSGFP 1755
Query: 209 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268
++ +I++ + PD FTY ISS A + Q +++ ++ G ++ N
Sbjct: 1756 GHAQNILGDIRKAGLAPDRFTYCTLISSWARAGAMLQARRWFNKACKTKAGPS--IEMCN 1813
Query: 269 -LVNIYITASHLVNAE 283
L++ Y+ A + A+
Sbjct: 1814 ALIDGYLKAREVEPAK 1829
>gi|326490553|dbj|BAJ84940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 856
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 11/163 (6%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+ ++A + + E A +L+ R+++ LS + Y+ M+ GQ+ + E+
Sbjct: 435 TYCTLIDIHAKSGYLEVAMDLYGRMQEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEM 494
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
P++ TYN+ I+ A N D V K +M +G D + Y ++ + H
Sbjct: 495 IDNGCTPNLVTYNIIIALQAKARNYDNVVKLYRDMQI-AGFRPDKITYSIVMEVLGHCGH 553
Query: 279 LVNAESSTLVEAEKSITQRQWIT----YDFLIILYAGLGNKDK 317
L AE+ L +R W Y L+ L+ GN DK
Sbjct: 554 LDEAEAVFLE------MRRDWAPDEPVYGLLVDLWGKAGNVDK 590
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 117/325 (36%), Gaps = 41/325 (12%)
Query: 95 LKELRKSQRYKHALEISEW--MVTHKEFVLSDSDYATRIDLMTKVFGIHS-GERYFEGL- 150
LK LR ++Y H L+ +W M H L A + + + K+ H+ +F L
Sbjct: 295 LKSLRAVEQYYHTLQQMKWGPMTEHVLDGLRCKIDAFQANQVLKLLHDHNIALGFFHWLK 354
Query: 151 --PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 208
P TYT ++ + AK +L + + N + YN ++ Y +
Sbjct: 355 RQPGFKHDGHTYTTMIGILGQAKQFGTMRKLLDEMSSVNCKPTVVTYNRIIHAYGRANYL 414
Query: 209 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268
+ V EE++ PD TY I A + ++ M + G S D Y
Sbjct: 415 REAVKVFEEMEGAGYQPDRVTYCTLIDIHAKSGYLEVAMDLYGRMQ-EVGLSPDTFTYSA 473
Query: 269 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 328
+VN L A E + +TY+ +I L A N D + ++++ +++
Sbjct: 474 MVNCLGKGGQLA-AAYKLFCEMIDNGCTPNLVTYNIIIALQAKARNYDNVVKLYRDMQIA 532
Query: 329 KQKMTSRNYICILSSYLMLGHLKEV------------------GEIIDQWKQSATSD--- 367
+ Y ++ GHL E G ++D W ++ D
Sbjct: 533 GFRPDKITYSIVMEVLGHCGHLDEAEAVFLEMRRDWAPDEPVYGLLVDLWGKAGNVDKAL 592
Query: 368 ------------FDISACNRLLGAF 380
++ CN LL AF
Sbjct: 593 GWYHAMLQDGLQPNVPTCNSLLSAF 617
>gi|255554390|ref|XP_002518234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542581|gb|EEF44120.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 932
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 112/249 (44%), Gaps = 23/249 (9%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYTA++ + ++A +F+ V+ + + +Y ++ + G ++ ++EE+
Sbjct: 327 TYTAIILGFCRKGKIDEAFAIFKLVENLGIKLDEFIYAILVDGFCLKGDFDRAYQLIEEM 386
Query: 219 KRKNVVPDIFTYNLWISS-CAA--TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275
++K + P I YN+ I+S C A T + D+V K L D + Y L++ YI
Sbjct: 387 EKKGITPTIVAYNILINSLCKAGRTFDADEVSKALQ---------GDKITYSALLHGYIK 437
Query: 276 ASHLVNAESSTLVEA----EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 331
+ S ++E E++ Q I ++ ++ +G + + ++ ++
Sbjct: 438 EEN-----SIGILEVRQRLEEARIQMDIIMFNIILKALFVVGAFEDVLVLYNGMQEMNLV 492
Query: 332 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 391
S Y I+ + +G + E EI D+++ S ++ N ++ G+ + A E
Sbjct: 493 ANSITYCTIIGGFCKVGRIDEALEIFDEFRHGLGS--SVACYNCMINGLCKNGMVDMAAE 550
Query: 392 FHMLLLQKN 400
+ L++K
Sbjct: 551 IFVELIEKG 559
Score = 37.7 bits (86), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 45/232 (19%), Positives = 98/232 (42%), Gaps = 8/232 (3%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
YT L+ ++ EK+ + + N + Y ++ + G++++ + + ++
Sbjct: 293 YTILIDGFSKEGSVEKSVGFLHHMLANGSEPNLVTYTAIILGFCRKGKIDEAFAIFKLVE 352
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
+ D F Y + + + D+ + ++EM G + V Y L+N A
Sbjct: 353 NLGIKLDEFIYAILVDGFCLKGDFDRAYQLIEEME-KKGITPTIVAYNILINSLCKAGRT 411
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 339
+A+ E K++ Q ITY L+ Y N I ++ + L + +M +
Sbjct: 412 FDAD-----EVSKAL-QGDKITYSALLHGYIKEENSIGILEVRQRLEEARIQMDIIMFNI 465
Query: 340 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 391
IL + ++G ++V + + ++ I+ C ++G F VG ++A E
Sbjct: 466 ILKALFVVGAFEDVLVLYNGMQEMNLVANSITYCT-IIGGFCKVGRIDEALE 516
>gi|452825793|gb|EME32788.1| mitochondrial protein translocase, MPT family [Galdieria
sulphuraria]
Length = 821
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 50/95 (52%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+ ++ E+A +LF+ +K++N+ N Y+ +++ + G VE+ + EE+
Sbjct: 425 TYATLIDAFSKRMEPERALKLFQEMKEANVKPNNYCYSSLISAFCRAGYVERALAIFEEM 484
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
+ +VPD+F +N I +D+ + D M
Sbjct: 485 THERIVPDVFAFNALIDGFGKLRQVDKAFEIYDRM 519
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 104/246 (42%), Gaps = 5/246 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+YT ++ A +K ++A ELFE++K + S N + Y ++ + G++E E++
Sbjct: 365 SYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDM 424
Query: 219 KRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
+ VP TY + I C A + D K F E G D + Y L++ + AS
Sbjct: 425 SGSSCVPTRTTYTVVIDGLCKAQMLPDACKVF--EQMVQKGCVPDTITYTTLIDGFSKAS 482
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
+ A V K + +TY ++ + L ++ ++ +R + +
Sbjct: 483 KMDEARKLLDVMLTKG-PEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIF 541
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 397
+LS YL G +E +++ + + D+ L+ G +A ++
Sbjct: 542 TSLLSYYLSKGRAEEAYQVLTEMTARGCAP-DVILYTSLIDLLFSTGRVPEARHVFDSMI 600
Query: 398 QKNCAP 403
+K CAP
Sbjct: 601 EKGCAP 606
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 102/255 (40%), Gaps = 16/255 (6%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
YT+L+ L +A +F+ + + + +AL Y ++ + +G VE ++E +
Sbjct: 576 YTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMA 635
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
+ V PD F YN + +DQ D M SG + V + L++
Sbjct: 636 KSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVA-SGIKPNAVTFNVLMHGLFKDGKT 694
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 339
A S EK ++Y LI GLG ++ + + Q+M R I
Sbjct: 695 DRAFSLFKEMLEKDEVPPTLVSYTILI---DGLGKAGRVSEAFSQF----QEMIDRGIIP 747
Query: 340 ILSSYLML-------GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
+Y L G + E ++++ + + D+ A + L+ D + + A +
Sbjct: 748 ECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNP-DVQAYSALITGLIDSSMVDTAWDV 806
Query: 393 HMLLLQKNCAPTNAS 407
++++ CAP +
Sbjct: 807 FQEMMKRGCAPNEVT 821
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 98/231 (42%), Gaps = 8/231 (3%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLS 153
++ L K+Q A ++ E MV K V Y T ID +K + + + +
Sbjct: 439 VIDGLCKAQMLPDACKVFEQMV-QKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTK 497
Query: 154 AK--TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 211
T+ TY +++H + +A+E+ ++++ ++ +++ Y+S G+ E+
Sbjct: 498 GPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEA 557
Query: 212 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
V+ E+ + PD+ Y I +T + + + D M + G + D + Y ++
Sbjct: 558 YQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSM-IEKGCAPDALTYGTIIQ 616
Query: 272 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 322
+ + V A L KS Y+ L+ Y L +++DQ +
Sbjct: 617 NFSKIGN-VEAAGEILELMAKSGVGPDCFAYNSLMDGYVKL---ERVDQAF 663
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 96/230 (41%), Gaps = 4/230 (1%)
Query: 174 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 233
E+A + + + + L + + N ++ +++K + E+ P I +YN
Sbjct: 2 EEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTV 61
Query: 234 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 293
IS A+ +D+ KF + M D+G D + + L++ + A L +A K
Sbjct: 62 ISGLASIDKMDEAYKFFNSM-IDNGCEPDVIAFTTLIHGFCKAGQ-PQVGHMLLNQALKR 119
Query: 294 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 353
++ Y +I Y G+ D +I + + + Y ++ LG + E
Sbjct: 120 FRPDVFL-YTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEA 178
Query: 354 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
E+ ++ ++S D L+ A S+ G ++A E + ++++ P
Sbjct: 179 YELFERMRKSGCLG-DYVTFMTLIEALSNHGKLDEACELYREMIERGYEP 227
>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
Length = 722
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 84/195 (43%), Gaps = 2/195 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +LL+ Y A ++A LF ++ + L+ L YN ++ Y +G +E+ + EE+
Sbjct: 380 TYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEM 439
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ +PD+ TY + + ++ ++F DEM G D Y + +T
Sbjct: 440 VEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEM-LSKGLQPDCFAYNTRIRAELTLGA 498
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ A V + I+ +TY+ LI GN + + + + Y
Sbjct: 499 IAKAFRLREVMMLEGISS-DTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYT 557
Query: 339 CILSSYLMLGHLKEV 353
C++ ++ G L+E
Sbjct: 558 CLIHAHCERGLLREA 572
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/116 (21%), Positives = 54/116 (46%), Gaps = 1/116 (0%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
T TY A++H + E A+ F ++ L + + YN ++ Y G +++ L+
Sbjct: 341 PTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLL 400
Query: 215 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 270
+++ + P + TYN+ I ++++ ++ +EM + G D Y L+
Sbjct: 401 FGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEM-VEQGCLPDVCTYTILM 455
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 148 EGLPLSAKTSE-TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 206
EG+ LS K S TY L+ + +KA++L ++ + + YN M+ + G
Sbjct: 298 EGMRLSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSG 357
Query: 207 QVEKVALVVEEIKRKNVVPDIFTYN 231
QVE + E++ + PD+ TYN
Sbjct: 358 QVEAAQVKFVEMRAMGLQPDVITYN 382
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 80/174 (45%), Gaps = 10/174 (5%)
Query: 174 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 233
E+A E+ E ++ S + ++ YN ++T ++ G V+K + E++ + ++P + TYN
Sbjct: 291 EEAAEMVEGMRLSKKA-SSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAM 349
Query: 234 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 293
I + ++ + EM G D + Y +L+N Y A L A + +
Sbjct: 350 IHGLLQSGQVEAAQVKFVEMRA-MGLQPDVITYNSLLNGYCKAGSLKEA-LLLFGDLRHA 407
Query: 294 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 347
+TY+ LI Y LG+ ++ R K++M + + + +Y +L
Sbjct: 408 GLAPTVLTYNILIDGYCRLGDLEEA-------RRLKEEMVEQGCLPDVCTYTIL 454
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 40/221 (18%), Positives = 95/221 (42%), Gaps = 6/221 (2%)
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK--NVVPDIFTYNLWISSCAATLN 242
Q + + + YN ++ ++ G+ +KVA++++E++ + +P+ T+N+ I+ A +
Sbjct: 230 QLGIEPSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGD 289
Query: 243 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 302
+++ + ++ M S Y L+ + + A+ L E E +TY
Sbjct: 290 LEEAAEMVEGMRLSKKASS--FTYNPLITGLLAKGFVKKADDLQL-EMENEGIMPTVVTY 346
Query: 303 DFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ 362
+ +I G + + +R + Y +L+ Y G LKE + +
Sbjct: 347 NAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRH 406
Query: 363 SATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
+ + ++ N L+ + +G E+A ++++ C P
Sbjct: 407 AGLAPTVLTY-NILIDGYCRLGDLEEARRLKEEMVEQGCLP 446
>gi|296083087|emb|CBI22491.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 2/168 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T A++ +Y + KA E+ + +K+ + + YN +M +Y E+ ++ EI
Sbjct: 351 TLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREI 410
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K + PDI +YN I + + + L EM +SG + D + Y + Y S
Sbjct: 411 LAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMR-ESGPAPDIITYNTFIASYAADSM 469
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 326
V A + Q TY+ ++ Y L +D+ +LR
Sbjct: 470 FVEAIDVVCYMIKHGCKPNQS-TYNSIVDWYCKLNRRDEASMFVNNLR 516
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 4/153 (2%)
Query: 159 TYTALLHLYAG-AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
T+ AL+ ++ K+TE + +FE +K S + + +N +++++ G +V+ V +E
Sbjct: 141 TFNALIKMHGNRGKFTEMMK-VFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKE 199
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
+KR VP+ T+N ISS + + DQ M ++G + D Y N V +
Sbjct: 200 MKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRM-LEAGVNPDLSSY-NAVLAALARG 257
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYA 310
L L E + + +TY L+ YA
Sbjct: 258 GLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYA 290
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 75/188 (39%), Gaps = 37/188 (19%)
Query: 159 TYTALLHLYAGAKWTEK----AEELF---------------------------ER----V 183
TY +LLH YA K E+ AEE++ ER +
Sbjct: 281 TYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLEL 340
Query: 184 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 243
+Q S + N M+++Y V K +++ +KR P + TYN + + + N
Sbjct: 341 RQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANF 400
Query: 244 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 303
++ ++ L E+ G D + Y ++ Y + +A S L E +S ITY+
Sbjct: 401 ERSEEILREI-LAKGIRPDIISYNTVIYAYCRNGRMRDA-SRVLSEMRESGPAPDIITYN 458
Query: 304 FLIILYAG 311
I YA
Sbjct: 459 TFIASYAA 466
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 40/77 (51%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT LL + A + A ++FE ++ N +N ++ ++ + G+ ++ V E+I
Sbjct: 106 TYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDI 165
Query: 219 KRKNVVPDIFTYNLWIS 235
K PDI T+N +S
Sbjct: 166 KTFQCSPDIVTWNTLLS 182
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 112/262 (42%), Gaps = 12/262 (4%)
Query: 148 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 207
E P ++ + ALL GAK + AE+ F + +S + +N +++ +GQ
Sbjct: 147 ESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQ 206
Query: 208 VEKVALVVEEIKRKNVVPDIFTYNLWISS-C--AATLNIDQVKKFLDEMSCDSGGSDDWV 264
+ K V ++IK + P + TYN I C N+ V L EM ++G S V
Sbjct: 207 LRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEM-VEAGISPTAV 265
Query: 265 KYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS 324
+ L+N Y S+ A E ++ +TY+ LI +GL ++ K+++ K
Sbjct: 266 TFGVLINGYCKNSNTA-AAVRVFEEMKQQGIAASVVTYNSLI---SGLCSEGKVEEGVKL 321
Query: 325 LRMTKQKMTSRNYI---CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFS 381
+ + S N I C+L + G + + + ID + + D+ L+ +
Sbjct: 322 MEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTER-NVEPDVVIYTILIDGYR 380
Query: 382 DVGLTEKANEFHMLLLQKNCAP 403
+G E A + +K +P
Sbjct: 381 RLGKMEDAMAVKEAMAKKGISP 402
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 2/166 (1%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
YT L+ Y E A + E + + +S N YN ++T + G + +++E+K
Sbjct: 372 YTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMK 431
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
K + D+ TYN+ I + + + K LDEMS + G + + Y ++ + ++
Sbjct: 432 EKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMS-EVGLEPNHLTYNTIIQGFCDKGNI 490
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 325
+A EK + +TY+ I + +G D+ + + +
Sbjct: 491 KSA-YEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEM 535
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 37/201 (18%), Positives = 85/201 (42%), Gaps = 2/201 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+ +L + A + + + + N+ + ++Y ++ Y +G++E V E +
Sbjct: 336 TFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAM 395
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+K + P++ TYN I+ + + + LDEM + G D V Y L+
Sbjct: 396 AKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMK-EKGIEADVVTYNVLIGALCCKGE 454
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ A L E + + +TY+ +I + GN +I + +++ Y
Sbjct: 455 VRKA-VKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYN 513
Query: 339 CILSSYLMLGHLKEVGEIIDQ 359
+ + +G + E +++++
Sbjct: 514 VFIKYFCQIGKMDEANDLLNE 534
>gi|449530353|ref|XP_004172160.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like, partial [Cucumis sativus]
Length = 312
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 109/249 (43%), Gaps = 3/249 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+TAL++ A EKAEE+FE+++++ + YN +M Y G A + +
Sbjct: 33 TFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLM 92
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ PD +YN+ + + + + +EM G + ++ L++ Y +A +
Sbjct: 93 QHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMK-RIGITPTMKSHMLLLSAYSSAGN 151
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ E + + KS + + ++ LY LG K++ ++ +++ + Y
Sbjct: 152 VAKCE-DIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQKGPCRADISTYN 210
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
+++ Y G ++ + E+ Q + + D+ +GA+S L ++ E ++
Sbjct: 211 ILINVYGRAGFVERMEELF-QLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLELFEKMID 269
Query: 399 KNCAPTNAS 407
C P +
Sbjct: 270 AGCYPDGGT 278
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 95/235 (40%), Gaps = 17/235 (7%)
Query: 176 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
A+ +F+ ++ N + ++ G EK + E+++ PD++ YN +
Sbjct: 15 AQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALME 74
Query: 236 S---CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 292
S ++ + M C+ D Y +V+ Y A ++ ++ + E K
Sbjct: 75 SYSRAGFPYGAAEIFSLMQHMGCEP----DRASYNIMVDAYGRAG--LHEDAQAVFEEMK 128
Query: 293 SITQRQWITYDFLII-LYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML-GHL 350
I + L++ Y+ GN K + I +M K + + +++S L L G L
Sbjct: 129 RIGITPTMKSHMLLLSAYSSAGNVAKCEDIIG--QMHKSGLKPDTF--VMNSMLNLYGRL 184
Query: 351 KEVGEIIDQWK--QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
+ G++ D + Q DIS N L+ + G E+ E LL KN P
Sbjct: 185 GQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGFVERMEELFQLLPAKNLEP 239
Score = 41.2 bits (95), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Query: 151 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 210
P A S TY L+++Y A + E+ EELF+ + NL + + + + Y ++
Sbjct: 201 PCRADIS-TYNILINVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKR 259
Query: 211 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCD 256
+ E++ PD T + +S+C++ I+QV + M D
Sbjct: 260 CLELFEKMIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVVRTMHKD 305
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 42/81 (51%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
T +++ LL Y+ A K E++ ++ +S L + + N M+ LY +GQ K+ +
Sbjct: 134 PTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDL 193
Query: 215 VEEIKRKNVVPDIFTYNLWIS 235
+++ DI TYN+ I+
Sbjct: 194 FSTMQKGPCRADISTYNILIN 214
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 102/254 (40%), Gaps = 7/254 (2%)
Query: 142 SGERYFEGLPLS---AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEM 198
S R+F+ + LS A TY L+ G ++A + ++ + N + YN +
Sbjct: 173 SARRFFDSM-LSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTL 231
Query: 199 MTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSG 258
+ + G+V+ +V ++ + P++ T+N ++ ++ +K DEM G
Sbjct: 232 VAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEM-VREG 290
Query: 259 GSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKI 318
+ D V Y LV Y A + S E + +T+ LI + GN ++
Sbjct: 291 LAPDGVSYNTLVGGYCKAG-CSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERA 349
Query: 319 DQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLG 378
+ + +R +M + ++ + G L + + KQ + N L+
Sbjct: 350 VTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKP-SVVCYNALIN 408
Query: 379 AFSDVGLTEKANEF 392
+ VG ++A E
Sbjct: 409 GYCMVGRMDEAREL 422
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 71/157 (45%), Gaps = 10/157 (6%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+T+L+H+ A E+A L ++++ L N + + ++ + G ++ L V +
Sbjct: 332 TFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGM 391
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K+ + P + YN I+ +D+ ++ L EM G D V Y +++ Y
Sbjct: 392 KQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEA-KGLKPDVVTYSTIISAYCK--- 447
Query: 279 LVNAESSTLVEAEKSITQR----QWITYDFLIILYAG 311
N ++ + E + + ++ ITY LI + G
Sbjct: 448 --NCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCG 482
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 119/303 (39%), Gaps = 61/303 (20%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+TAL+ + + + A +KQ + + + YN ++ Y VG++++ ++ E+
Sbjct: 367 TFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEM 426
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKF-LDEMSCDSGGSDDWVKYVNLVNIYITAS 277
+ K + PD+ TY+ IS A N D F L++ + G D + Y +L+ +
Sbjct: 427 EAKGLKPDVVTYSTIIS--AYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEK 484
Query: 278 HLVNAES-----------------STLVEAE-----------------KSITQRQWITYD 303
L +A ++L++ K+ +TY
Sbjct: 485 RLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYS 544
Query: 304 FLI--------------ILYAGLGNKDKI--DQIWKSLRMTKQKMTSRNYICILSSYLML 347
LI +L+ L ++D I + + +L +K ++ + +L + M
Sbjct: 545 VLINGLSKSARAMEAQQLLFK-LYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMK 603
Query: 348 GHLKEVGEIIDQWKQSATS---DFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 404
G + E D+ QS + D S + L+ G KA FH +LQ AP
Sbjct: 604 GLMNEA----DKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPN 659
Query: 405 NAS 407
+ S
Sbjct: 660 STS 662
>gi|356512664|ref|XP_003525037.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74750-like [Glycine max]
Length = 873
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+ ++A A + + A +++R++++ LS + Y+ ++ G + + E+
Sbjct: 449 TYCTLIDIHAKAGFIDVAMSMYKRMQEAGLSPDTFTYSVIINCLGKAGNLAAAHWLFCEM 508
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
VP++ TYN+ I+ A N + K +M ++G D V Y ++ +
Sbjct: 509 VEHGCVPNLVTYNIMIALQAKARNYEMALKLYHDMQ-NAGFQPDKVTYSIVMEALGHCGY 567
Query: 279 LVNAESSTLVEAEKSITQRQWIT----YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 334
L AE S VE + Q+ W+ Y L+ L+ GN +K + +++ M +
Sbjct: 568 LEEAE-SVFVEMQ----QKNWVPDEPVYGLLVDLWGKAGNVEKASEWYQA--MLNAGLLP 620
Query: 335 RNYIC--ILSSYLMLGHLKEVGEII 357
C +LS++L L L + ++
Sbjct: 621 NVPTCNSLLSAFLRLHRLPDAYNLV 645
>gi|294461912|gb|ADE76512.1| unknown [Picea sitchensis]
Length = 224
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 82/192 (42%), Gaps = 8/192 (4%)
Query: 170 AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFT 229
K +A L + + +S + +YN +M Y + + + + +++ + PD+ T
Sbjct: 7 GKNMREARNLLDGMLESGCKPDGFLYNTLMKGYCKINKANEALEIYKKMDAEGCAPDVVT 66
Query: 230 YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVE 289
+N I + +D+ KKFL M +G D + Y +L+N + A + L E
Sbjct: 67 FNTLIFGLSKVAKVDEAKKFLKLMV-RAGHPPDVITYTSLMNGMCRKGDAMGA-LALLEE 124
Query: 290 AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK---MTSRNYICILSSYLM 346
++S+ Q TY+ L+ GL + Q K + K K + S Y L +
Sbjct: 125 MQQSVCQPDGCTYNTLM---HGLCMCQHLHQALKLYEVLKSKEVDLESGTYAAFLKALCR 181
Query: 347 LGHLKEVGEIID 358
G + E E+ D
Sbjct: 182 AGKVAEAYEVFD 193
>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
Length = 1039
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 97/226 (42%), Gaps = 36/226 (15%)
Query: 174 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 233
+ A+ +F + S +A+ Y ++ Y +G++E+ ++ E++R V PD+ TYN++
Sbjct: 686 DHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVF 745
Query: 234 ISSCAATLNID----QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVE 289
I+ C +D +K+ +D SC+ W+ + + + + +H V+
Sbjct: 746 INGCGHMGYMDCAFSTLKRMIDA-SCEPNYWTYWLLLKHFLKMSLANAHYVDT------- 797
Query: 290 AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL-RMTKQKM--TSRNYICILSSYLM 346
+G+ N K+D +W+ L RM K + T+ Y I++ +
Sbjct: 798 --------------------SGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCK 837
Query: 347 LGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
L+E ++D S + L+ D+ L EKA F
Sbjct: 838 ATRLEEACVLLDHMLGKDISPNE-EIYTMLIKCCCDIKLFEKAASF 882
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 96/249 (38%), Gaps = 12/249 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+YT L+ + +A L + Q S N Y ++ G++ ++++E+
Sbjct: 255 SYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEM 314
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
R+ VVP ++TYN I + + M + DDW Y +L++
Sbjct: 315 PRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWT-YNSLIH------G 367
Query: 279 LVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 334
L + E R + IT+ +I Y D ++ + +K K+
Sbjct: 368 LCGGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDL 427
Query: 335 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 394
+ Y ++S + LKE + +++ + S ++ ++ A+ VG A E
Sbjct: 428 QAYGVLISVLIKKHRLKEAKDTLNEIFANGLSP-NVVIYTSIIDAYCKVGKVGAALEVFK 486
Query: 395 LLLQKNCAP 403
L + C P
Sbjct: 487 LTEHEGCRP 495
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 56/293 (19%), Positives = 113/293 (38%), Gaps = 14/293 (4%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
A ++ ++ G TV +I+ K+++ AL + M++ K L Y I
Sbjct: 376 AEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSK-CKLDLQAYGVLI 434
Query: 132 DLMTKVFGIHSG-----ERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQS 186
++ K + E + GL + YT+++ Y A E+F+ +
Sbjct: 435 SVLIKKHRLKEAKDTLNEIFANGL---SPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHE 491
Query: 187 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 246
NA Y+ ++ + ++ K ++ +++ + P + TY I D
Sbjct: 492 GCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNA 551
Query: 247 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI 306
+ + M +G + D Y N++ + S S LV+ +T+ +TY L+
Sbjct: 552 FRLFEMME-QNGLTPDEQAY-NVLTDALCKSGRAEEAYSFLVKKGVVLTK---VTYTSLV 606
Query: 307 ILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 359
++ GN + + + + K S Y +L + L E I+DQ
Sbjct: 607 DGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQ 659
>gi|218197756|gb|EEC80183.1| hypothetical protein OsI_22045 [Oryza sativa Indica Group]
Length = 577
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 79/186 (42%), Gaps = 2/186 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY A++ ++ ++AE +F+ + + +A+ YN ++ + G VE+V V EE+
Sbjct: 103 TYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEEL 162
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ D TYN I +D DEM G + D V Y LV+
Sbjct: 163 VKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRA-IGCTPDAVTYTVLVDSLGKMDR 221
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ A L E + + +T+ LI YA G +D ++ + + + K Y+
Sbjct: 222 ISEA-GKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYL 280
Query: 339 CILSSY 344
+L +
Sbjct: 281 VMLDVF 286
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/189 (20%), Positives = 81/189 (42%), Gaps = 2/189 (1%)
Query: 176 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
A EL V+Q+ L +A+ YN +++ ++ V EE+ PD++TYN +S
Sbjct: 50 ALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVS 109
Query: 236 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 295
+ + E+ + G D V Y +L+ + + E E K+
Sbjct: 110 VHGRCGKAQEAELMFKEL-VEKGFQPDAVTYNSLLYAFAKEGDVERVE-RVCEELVKAGF 167
Query: 296 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 355
++ ITY+ +I +Y +G D ++ +R + Y ++ S + + E G+
Sbjct: 168 RKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGK 227
Query: 356 IIDQWKQSA 364
++++ +
Sbjct: 228 VLEEMADAG 236
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 78/168 (46%), Gaps = 7/168 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+ + + A +FE + S + YN M++++ G+ ++ L+ +E+
Sbjct: 68 TYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKEL 127
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K PD TYN + + A ++++V++ +E+ +G D + Y ++++Y
Sbjct: 128 VEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEEL-VKAGFRKDGITYNTMIHMYGKMGR 186
Query: 279 LVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSL 325
L A L + ++I +TY +L LG D+I + K L
Sbjct: 187 LDLALG--LYDEMRAIGCTPDAVTY---TVLVDSLGKMDRISEAGKVL 229
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/164 (18%), Positives = 78/164 (47%), Gaps = 7/164 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY ++H+Y + A L++ ++ + +A+ Y ++ + ++ + V+EE+
Sbjct: 173 TYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEM 232
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ P + T++ I + A + D ++ D M +SG D + Y+ +++++ +
Sbjct: 233 ADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRM-VESGVKPDRLAYLVMLDVFARSD- 290
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLI-ILYAGLGNKDKIDQI 321
E+ L+ +++ + + D L +L A L ++ D+I
Sbjct: 291 ----ETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEI 330
>gi|115483719|ref|NP_001065521.1| Os11g0103000 [Oryza sativa Japonica Group]
gi|77548314|gb|ABA91111.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113644225|dbj|BAF27366.1| Os11g0103000 [Oryza sativa Japonica Group]
Length = 543
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 98/222 (44%), Gaps = 6/222 (2%)
Query: 191 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVV-----PDIFTYNLWISSCAATLNIDQ 245
N+ +Y +M YM+ G+VE V ++ ++R+ PD TY IS+ A ++++
Sbjct: 196 NSRVYTTLMKGYMNAGRVEDVVAMLRAMRREGETSPASRPDHVTYTTVISTLVAAGDMER 255
Query: 246 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFL 305
+ L+EM +G + V Y L+ Y A+ V+ ++ Q +TY+ L
Sbjct: 256 ARAVLEEMG-QAGVAASRVTYNVLIKGYCQQLQAGKAKELLAVDMAEAGIQPDVVTYNTL 314
Query: 306 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 365
I + ++ +R ++ +Y ++ ++ G K ++ D+ ++
Sbjct: 315 IDGCVLTDDSAGAVALFNEMRERGIAPSAVSYTTLMKAFAASGQPKLAHKVFDEMEKDPR 374
Query: 366 SDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
D +A N L+ A+ +GL E A + + + P A+
Sbjct: 375 VAVDRAAWNMLVEAYCRLGLLESAKKVVERMKARGVQPDVAT 416
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 104/276 (37%), Gaps = 21/276 (7%)
Query: 140 IHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMM 199
+ + R E P S TYT ++ A E+A + E + Q+ ++ + + YN ++
Sbjct: 220 LRAMRREGETSPASRPDHVTYTTVISTLVAAGDMERARAVLEEMGQAGVAASRVTYNVLI 279
Query: 200 TLYMSVGQVEKVA-LVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSG 258
Y Q K L+ ++ + PD+ TYN I C T + +EM + G
Sbjct: 280 KGYCQQLQAGKAKELLAVDMAEAGIQPDVVTYNTLIDGCVLTDDSAGAVALFNEMR-ERG 338
Query: 259 GSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK----SITQRQWITYDFLIILYAGLGN 314
+ V Y L+ + AS E EK ++ + W + L+ Y LG
Sbjct: 339 IAPSAVSYTTLMKAF-AASGQPKLAHKVFDEMEKDPRVAVDRAAW---NMLVEAYCRLG- 393
Query: 315 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGH----LKEVGEIIDQWKQSATSDFDI 370
+ +S + ++M +R +++Y L + GE + W++ + D
Sbjct: 394 ------LLESAKKVVERMKARGVQPDVATYGSLAKGIAVARRPGEALLLWEEIKEKEVDG 447
Query: 371 SACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNA 406
L L KA E + + P A
Sbjct: 448 EVVEALADVCVRAALFRKALEMVARMEEMGVEPNKA 483
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 90/222 (40%), Gaps = 11/222 (4%)
Query: 150 LPLSAKT----SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNA-----LMYNEMMT 200
+PL K S YT L+ Y A E + +++ + A + Y +++
Sbjct: 186 VPLLPKAYPPNSRVYTTLMKGYMNAGRVEDVVAMLRAMRREGETSPASRPDHVTYTTVIS 245
Query: 201 LYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGS 260
++ G +E+ V+EE+ + V TYN+ I L + K+ L ++G
Sbjct: 246 TLVAAGDMERARAVLEEMGQAGVAASRVTYNVLIKGYCQQLQAGKAKELLAVDMAEAGIQ 305
Query: 261 DDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQ 320
D V Y L++ + A + E+ I ++Y L+ +A G +
Sbjct: 306 PDVVTYNTLIDGCVLTDDSAGAVALFNEMRERGIAP-SAVSYTTLMKAFAASGQPKLAHK 364
Query: 321 IWKSLRMTKQKMTSR-NYICILSSYLMLGHLKEVGEIIDQWK 361
++ + + R + ++ +Y LG L+ +++++ K
Sbjct: 365 VFDEMEKDPRVAVDRAAWNMLVEAYCRLGLLESAKKVVERMK 406
>gi|297723401|ref|NP_001174064.1| Os04g0583150 [Oryza sativa Japonica Group]
gi|38346804|emb|CAE04154.2| OSJNBa0088A01.11 [Oryza sativa Japonica Group]
gi|125591406|gb|EAZ31756.1| hypothetical protein OsJ_15910 [Oryza sativa Japonica Group]
gi|215686818|dbj|BAG89668.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255675722|dbj|BAH92792.1| Os04g0583150 [Oryza sativa Japonica Group]
Length = 606
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 115/263 (43%), Gaps = 38/263 (14%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
A + Y++++ A A + AE+L+ + + M+ +++ +++ G+VEK+
Sbjct: 292 APNATIYSSIIRSLADAHESSAAEDLYNEAWKKGRLGDPDMFLKVIVMHVEAGRVEKIMG 351
Query: 214 VVEE--------------------IKRKNVVPDIFTYNLWIS-SC-------AATLNI-- 243
V ++ +KR+ + P I Y+ I+ C A+ +N+
Sbjct: 352 VAKDMRETGLRVTDCILSTIVNGFVKRRGLKPAIRAYDKLIALGCEPGQVTYASVINVYC 411
Query: 244 -----DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQ 298
D+ + EM D G V Y N++++Y S +A V +K
Sbjct: 412 QLGRSDRAESVFSEM-IDRGFDKCVVAYGNMISMYGKISRASDAMRLLAVMKKKGCEPNI 470
Query: 299 WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 358
W+ Y+ L+ ++ LGN + ++IWK + K + +Y I++++ G L ++
Sbjct: 471 WV-YNSLLDMHGRLGNSRQAEKIWKEMMRRKIQPDRISYTAIINAFNRSGELDRCMDLYQ 529
Query: 359 QWKQSATSDFDISACNRLLGAFS 381
+++++ D + ++G FS
Sbjct: 530 EFRETG-GKVDTALAGLMVGVFS 551
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 104/247 (42%), Gaps = 5/247 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSN--LSFNALMYNEMMTLYMSVGQVEKVALVVE 216
+Y+ +L +++A +LF+ + + S N + YN ++ + G+ K +
Sbjct: 230 SYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFH 289
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
E+ R+ V PD+ TYNL I + +D+ + L +M+ +G D V Y +++ Y T
Sbjct: 290 EMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMT-TNGAQPDTVTYNCMIHGYATL 348
Query: 277 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 336
L A + + I FL L G + +I+ S+ K +
Sbjct: 349 GRLKEAAKMFRKMKSRGLIPNIVICNSFLASL-CKHGRSKEAAEIFDSMTAKGHKPDIVS 407
Query: 337 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 396
Y +L Y G ++ + + K + + D N L+ A++ G+ + A +
Sbjct: 408 YCTLLHGYASEGWFADMIGLFNSMKSNGIAA-DCRVFNILIHAYAKRGMVDDAMLIFTEM 466
Query: 397 LQKNCAP 403
Q+ +P
Sbjct: 467 QQQGVSP 473
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 90/204 (44%), Gaps = 3/204 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y LLH YA W LF +K + ++ + ++N ++ Y G V+ L+ E+
Sbjct: 407 SYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEM 466
Query: 219 KRKNVVPDIFTYNLWISSCAATLNI-DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
+++ V PD+ TY+ IS+ + + D ++KF ++ G + Y +++ +
Sbjct: 467 QQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVA--RGIQPNTAVYHSIIQGFCMHG 524
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
LV A+ K I + + ++ +I G I+ + ++ +
Sbjct: 525 GLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITF 584
Query: 338 ICILSSYLMLGHLKEVGEIIDQWK 361
++ Y ++G + + +I+D +
Sbjct: 585 TSLIDGYCLVGKMDKAFKILDAME 608
>gi|302797110|ref|XP_002980316.1| hypothetical protein SELMODRAFT_420032 [Selaginella moellendorffii]
gi|300151932|gb|EFJ18576.1| hypothetical protein SELMODRAFT_420032 [Selaginella moellendorffii]
Length = 1527
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 6/136 (4%)
Query: 149 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 208
G+P S S TY L+H+YA A+ ++ A EL+ +S L N ++YN ++ Y S G
Sbjct: 1148 GIPFS---SATYAILIHMYAKARDSKAAAELYADYLRSGLEPNLIVYNNVILSYGSSGFP 1204
Query: 209 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268
++ +I++ + PD FTY ISS A + Q +++ ++ G ++ N
Sbjct: 1205 GHAQNILGDIRKAGLAPDRFTYCTLISSWARAGAMLQARRWFNKACKTKAGPS--IEMCN 1262
Query: 269 -LVNIYITASHLVNAE 283
L++ Y+ A + A+
Sbjct: 1263 ALIDGYLKAREVEPAK 1278
>gi|302797108|ref|XP_002980315.1| hypothetical protein SELMODRAFT_444519 [Selaginella moellendorffii]
gi|300151931|gb|EFJ18575.1| hypothetical protein SELMODRAFT_444519 [Selaginella moellendorffii]
Length = 2030
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 6/136 (4%)
Query: 149 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 208
G+P S S TY L+H+YA A+ ++ A EL+ +S L N ++YN ++ Y S G
Sbjct: 1655 GIPFS---SATYAILIHMYAKARDSKAAAELYADYLRSGLEPNLIVYNNVILSYGSSGFP 1711
Query: 209 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268
++ +I++ + PD FTY ISS A + Q +++ ++ G ++ N
Sbjct: 1712 GHAQNILGDIRKAGLAPDRFTYCTLISSWARAGAMLQARRWFNKACKTKAGPS--IEMCN 1769
Query: 269 -LVNIYITASHLVNAE 283
L++ Y+ A + A+
Sbjct: 1770 ALIDGYLKAREVEPAK 1785
>gi|297821008|ref|XP_002878387.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324225|gb|EFH54646.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 766
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/370 (20%), Positives = 149/370 (40%), Gaps = 51/370 (13%)
Query: 85 QATVSELRHILKELRKSQRYKHALEISEWMVTHK----EFVLSDS-DYATRIDLMTKVFG 139
+ V L ++ L KS+R AL++ E M + + +DS + T ID + KV
Sbjct: 326 RPDVVTLGILINTLCKSRRVDEALQVFEQMCGKRTDDGNVIKADSIHFNTLIDGLCKVGR 385
Query: 140 IHSGERYFEGLPLSAK---TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYN 196
+ E + + + + TY L+ Y A E A+E+ R+K+ + + + N
Sbjct: 386 LKEAEELLVRMKMEERCVPNTVTYNCLIDGYCRAGKLETAKEVVSRMKEDGIKPDVVTVN 445
Query: 197 EMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM--- 253
++ + L +++++ V ++ TY I +C + NI++ + D+M
Sbjct: 446 TIVGGMCRHHGLNMAVLFFMDMEKEGVKGNVVTYMTLIHACCSLSNIEKAMHWFDKMLEA 505
Query: 254 SC-------------------------------DSGGSDDWVKYVNLVNIYITASHLVNA 282
C + G S D + Y L+ ++ + NA
Sbjct: 506 GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLREGGFSLDLLAYNMLIGLFCDKN---NA 562
Query: 283 ES--STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICI 340
E L + EK + ITY+ LI + + + ++++ + +R + T Y +
Sbjct: 563 EKVYEMLTDMEKEGMKPDSITYNTLISFFGKHKDFESVERMMEQMREDELDPTVATYGAV 622
Query: 341 LSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA----NEFHMLL 396
+ +Y +G L E ++ + + + N L+ AFS +G +A E M +
Sbjct: 623 IEAYCSVGELGEALKLFKDMGLRSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKM 682
Query: 397 LQKNCAPTNA 406
++ N NA
Sbjct: 683 VRPNVETYNA 692
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 105/249 (42%), Gaps = 10/249 (4%)
Query: 71 SATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDS-DYAT 129
+A V+ R +G + V + I+ + + A+ +M KE V + Y T
Sbjct: 424 TAKEVVSRMKEDGIKPDVVTVNTIVGGMCRHHGLNMAVLF--FMDMEKEGVKGNVVTYMT 481
Query: 130 RIDLMTKVFGIHSGERYFEGLPLSAKTS---ETYTALLHLYAGAKWTEKAEELFERVKQS 186
I + I +F+ + L A S + Y AL+ + A + E++++
Sbjct: 482 LIHACCSLSNIEKAMHWFDKM-LEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLREG 540
Query: 187 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 246
S + L YN ++ L+ EKV ++ +++++ + PD TYN IS + + V
Sbjct: 541 GFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGMKPDSITYNTLISFFGKHKDFESV 600
Query: 247 KKFLDEMSCDSGGSDDWVK-YVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFL 305
++ +++M D D V Y ++ Y + L A +S + Y+ L
Sbjct: 601 ERMMEQMREDE--LDPTVATYGAVIEAYCSVGELGEALKLFKDMGLRSKVNPNTVIYNIL 658
Query: 306 IILYAGLGN 314
I ++ LGN
Sbjct: 659 INAFSKLGN 667
>gi|356551964|ref|XP_003544342.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 551
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 110/241 (45%), Gaps = 9/241 (3%)
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSF 190
+++ +K I + + F+G+ S + T+ AL+ YA EK EL +++++
Sbjct: 311 VEMYSKCQDIVAAQMAFDGV--SERDLPTWNALISGYARCNQAEKIRELHQKMRRDGFEP 368
Query: 191 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 250
N +N ++ Y+ Q + + E++ N+ PDI+T + +++C+ I + K+ +
Sbjct: 369 NVYTWNGIIAGYVENKQYDSAMQLFTEMQIANLRPDIYTVGIILAACSRLATIQRGKQ-V 427
Query: 251 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYA 310
S +G D LV++Y + I+ ++++ ++ YA
Sbjct: 428 HAYSIRAGHDSDVHIGAALVDMYAKC-----GDVKHCYRVYNMISNPNLVSHNAMLTAYA 482
Query: 311 GLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDI 370
G+ ++ +++ + +K + ++ +LSS + G L E+G S+T ++
Sbjct: 483 MHGHGEEGIALFRRMLASKVRPDHVTFLAVLSSCVHAGSL-EIGHECLALMASSTKHMNL 541
Query: 371 S 371
S
Sbjct: 542 S 542
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 108/242 (44%), Gaps = 7/242 (2%)
Query: 152 LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 211
S K++ +Y A++ Y KA+ELF+R++Q + + + +N M++ Y+ ++
Sbjct: 194 FSRKSAASYNAMIAGYWENGNLFKAKELFDRMEQEGVQKDRISWNSMISGYVDGSLFDEA 253
Query: 212 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
+ ++ ++ + PD FT ++ CA +I + K+ ++ G + + LV
Sbjct: 254 YSLFRDLLKEGIEPDSFTLGSVLAGCADMASIRRGKE-AHSLAIVRGLQSNSIVGGALVE 312
Query: 272 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 331
+Y +V A+ A +++R T++ LI YA +KI ++ + +R +
Sbjct: 313 MYSKCQDIVAAQM-----AFDGVSERDLPTWNALISGYARCNQAEKIRELHQKMRRDGFE 367
Query: 332 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 391
+ I++ Y+ ++ + Q A DI +L A S + ++ +
Sbjct: 368 PNVYTWNGIIAGYVENKQYDSAMQLFTEM-QIANLRPDIYTVGIILAACSRLATIQRGKQ 426
Query: 392 FH 393
H
Sbjct: 427 VH 428
>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
Length = 1351
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/206 (19%), Positives = 91/206 (44%), Gaps = 2/206 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L++ + + +A E+++ + + + Y+ +M + VE V ++ E+
Sbjct: 241 TYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREM 300
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ V P++++Y + I D+ + L EM + G D + + L+ + A
Sbjct: 301 EAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEME-NEGCKPDVITHTVLIQVLCDAGR 359
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ +A+ + +KS + +TY L+ +A G + +IW +++ Y
Sbjct: 360 ISDAK-DVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYT 418
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSA 364
++ + +G + E E+ D+ KQ
Sbjct: 419 AVIDALCQVGRVFEALEMFDEMKQKG 444
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 108/238 (45%), Gaps = 11/238 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT ++ + A ++A ++F + ++N + L+ N ++ G+ ++ + ++
Sbjct: 556 TYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQL 615
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K N+ P TYN ++ + +V L+EM S + + Y +++
Sbjct: 616 KEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMY-HSNYPPNLITYNTILDCLCK--- 671
Query: 279 LVNAESSTLVEAEKSITQRQWIT--YDFLIILYAGLGNKDKIDQIWKSL-RMTKQKMTSR 335
N + ++ S+T + I + ++Y GL +++ ++ + +M K +
Sbjct: 672 --NGAVNDALDMLYSMTTKGCIPDLSSYNTVIY-GLVKEERYNEAFSIFCQMKKVLIPDY 728
Query: 336 NYIC-ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
+C IL S++ +G +KE II ++ S D S+C+ L+ TEK+ EF
Sbjct: 729 ATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILKKAGTEKSIEF 786
Score = 44.3 bits (103), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 107/266 (40%), Gaps = 23/266 (8%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLS 153
+L + KS R + L++ E M H++ S T + T + G+ R + + L
Sbjct: 875 LLDAMGKSMRIEEMLKVQEEM--HRKGYES-----TYVTYNTIISGLVKSRRLEQAIDLY 927
Query: 154 --------AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSV 205
+ T TY LL A E AE LF + + N +YN ++ +
Sbjct: 928 YNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIA 987
Query: 206 GQVEKVALVVEEIKRKNVVPDIFTYNLWISS-CAATLNIDQVKKF--LDEMSCDSGGSDD 262
G EKV + +++ + + PDI +Y + I + C A D + F L EM G D
Sbjct: 988 GNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEM----GLEPD 1043
Query: 263 WVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 322
+ Y NL+ + S + S E +K TY+ LI+ G + +++
Sbjct: 1044 LITY-NLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMY 1102
Query: 323 KSLRMTKQKMTSRNYICILSSYLMLG 348
+ L K Y ++ Y + G
Sbjct: 1103 EELLTKGWKPNVFTYNALIRGYSVSG 1128
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 91/226 (40%), Gaps = 5/226 (2%)
Query: 183 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 242
+K++ + NA YN ++ + G + V + + VVP + TY++ + + +
Sbjct: 230 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRD 289
Query: 243 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 302
++ V L EM G + Y + + A A L E E + IT+
Sbjct: 290 VETVLWLLREMEA-HGVKPNVYSYTICIRVLGQARRFDEA-YRILAEMENEGCKPDVITH 347
Query: 303 DFLIILYAGLGN-KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 361
LI + G D D WK ++ + QK YI +L + G + V EI + K
Sbjct: 348 TVLIQVLCDAGRISDAKDVFWK-MKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMK 406
Query: 362 QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
+D ++ A ++ A VG +A E + QK P S
Sbjct: 407 ADGYND-NVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYS 451
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 83/212 (39%), Gaps = 14/212 (6%)
Query: 52 SDGKDDLKSRIFRISLPKRSATN-----VIQRW---VSEGNQATVSELRHILKELRKSQR 103
SD K D R+ I+L + A N V++ W ++G V ++ L + R
Sbjct: 373 SDQKPD---RVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGR 429
Query: 104 YKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTAL 163
ALE+ + M K V Y + I K F+ + + YT +
Sbjct: 430 VFEALEMFDEM-KQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHV 488
Query: 164 LHL--YAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 221
L + Y + + KA + +E +K + + + N ++ G++ V E+K
Sbjct: 489 LFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAM 548
Query: 222 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
V PD TY + I C+ D+ K +M
Sbjct: 549 GVSPDTITYTMMIKCCSKASKFDEAVKIFYDM 580
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 57/293 (19%), Positives = 121/293 (41%), Gaps = 9/293 (3%)
Query: 64 RISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLS 123
+I L K + + + ++ G++ S +++ + K + ++E +E ++ L
Sbjct: 740 KIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILKKAGTEKSIEFAE-IIASSGITLD 798
Query: 124 DSDYATRIDLMTK---VFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELF 180
D I + K H + F+ +S KT +Y +L+ + AE LF
Sbjct: 799 DFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTG-SYNSLICGLVDENLIDIAEGLF 857
Query: 181 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 240
+K+ + YN ++ ++E++ V EE+ RK TYN IS +
Sbjct: 858 AEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKS 917
Query: 241 LNIDQ-VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 299
++Q + + + MS G S Y L++ + A + +AE + E + +
Sbjct: 918 RRLEQAIDLYYNLMS--QGFSPTPCTYGPLLDGLLKAGRIEDAE-NLFNEMLEYGCKANC 974
Query: 300 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 352
Y+ L+ + GN +K+ +++ + ++Y I+ + G L +
Sbjct: 975 TIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLND 1027
>gi|449444598|ref|XP_004140061.1| PREDICTED: pentatricopeptide repeat-containing protein At5g27270-like
[Cucumis sativus]
Length = 1062
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 110/251 (43%), Gaps = 10/251 (3%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGL-PLSAKTS-ETYTALLHLYAGAKWTEKAEELFERVK 184
+ T I M + +H R +E + L S +TY ++ +Y + +KA E+F +
Sbjct: 776 FNTFIKAMLEGGKLHFASRIYEHMIALGIVPSIQTYNTMISVYGRGRKLDKAVEMFNAAR 835
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
S LS + Y +++ Y G+ + +L+ +E+ + V P + +YN+ ++ A +
Sbjct: 836 SSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEMLEEGVKPGMVSYNIMVNVYANAGLHE 895
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 304
+ + L M D+ D + Y +L+ Y + AE EK I YD
Sbjct: 896 ETENLLKAMEQDAIVPDSFT-YFSLIRAYTQSCKYSEAEKIINSMQEKGIPT-TCAHYDL 953
Query: 305 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC---ILSSYLMLGHLKEVGEIIDQWK 361
L+ A G K ++++ L+ S + C ++ YL G+++E + +
Sbjct: 954 LLSALAKAGMIRKAERVYDELQTAG---LSPDVTCNRTLMRGYLDYGYVREGIKFFESTC 1010
Query: 362 QSATSDFDISA 372
+ A F +SA
Sbjct: 1011 KYAGDRFIMSA 1021
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 95/232 (40%), Gaps = 11/232 (4%)
Query: 176 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
AE + L + + +N + + G++ + + E + +VP I TYN IS
Sbjct: 757 AENVVRASLNCGLELDTVAFNTFIKAMLEGGKLHFASRIYEHMIALGIVPSIQTYNTMIS 816
Query: 236 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV-EAEKSI 294
+D+ + + + SG S D Y NL++ Y A E+S L E +
Sbjct: 817 VYGRGRKLDKAVEMFNA-ARSSGLSPDEKAYTNLISCYGKAGK--THEASLLFKEMLEEG 873
Query: 295 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 354
+ ++Y+ ++ +YA G ++ + + K++ S Y ++ +Y E
Sbjct: 874 VKPGMVSYNIMVNVYANAGLHEETENLLKAMEQDAIVPDSFTYFSLIRAYTQSCKYSEAE 933
Query: 355 EIIDQWKQSATSDFDISAC---NRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
+II+ ++ + C + LL A + G+ KA + L +P
Sbjct: 934 KIINSMQEKGIP----TTCAHYDLLLSALAKAGMIRKAERVYDELQTAGLSP 981
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 78/189 (41%), Gaps = 6/189 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
YT +L Y + AEE F + + L + + M+ Y G + + +
Sbjct: 191 VYTIVLRAYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHHKTMLSFYSAV 250
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K + +VP I +N +SS +VK+ +M + G + Y ++N + H
Sbjct: 251 KDRGIVPPIAVFNFMLSSLQKKGLHAKVKELWMQM-VEIGVTFSDFTYTVVINSLVKEGH 309
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
A E + + +TY+ LI L N D++ +++K +R + + NY
Sbjct: 310 SEEA-FKVFNEMKNCGFIPEEVTYNLLISLSIKRENSDEVLRLYKDMR--DKDIVPSNYT 366
Query: 339 CILSSYLML 347
C SS L L
Sbjct: 367 C--SSLLTL 373
>gi|413944457|gb|AFW77106.1| hypothetical protein ZEAMMB73_510937 [Zea mays]
Length = 492
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 120/285 (42%), Gaps = 14/285 (4%)
Query: 122 LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFE 181
L D A R D KVF + + +++ Y L+ + K EKA +LF+
Sbjct: 112 LHDRVAALRWDSALKVFELMRDQVWYK------PHIGIYIKLITMLGKCKQPEKAHQLFQ 165
Query: 182 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK-RKNVVPDIFTYNLWISSCAAT 240
+ + N Y +++ Y G+ + +++ +K PD+ TY++ I SC
Sbjct: 166 AMIDEGCAPNLQSYTALVSTYSRSGRFREAFDLLDRMKDTPGCQPDVQTYSILIKSCLHA 225
Query: 241 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI 300
+ ++VK L +M+ +G + V Y L++ Y A ES+ L ++ W
Sbjct: 226 YDFEKVKSLLADMA-RAGIPPNTVTYNTLIDAYGKAGRFAEMESTLLKMLSQNCKPDVW- 283
Query: 301 TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW 360
T + + + G + ++ ++ + + + Y +L SY +++G ++ ++
Sbjct: 284 TMNSTLRAFGSSGQIETMESCYEKFQASGIVPNIKTYNILLDSYGKAKMYEKMGAVM-EY 342
Query: 361 KQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL----LQKNC 401
Q + I N ++ AF G E+ L+ ++ NC
Sbjct: 343 MQKYYYSWTIVTYNVVIDAFGRAGDLEQMEYIFRLMKSERIKPNC 387
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 67/342 (19%), Positives = 125/342 (36%), Gaps = 56/342 (16%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
A + Q + EG + ++ +S R++ A ++ + M K+ D T
Sbjct: 160 AHQLFQAMIDEGCAPNLQSYTALVSTYSRSGRFREAFDLLDRM---KDTPGCQPDVQTYS 216
Query: 132 DLMTKVFGIHSGERY--------FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERV 183
L+ + E+ G+P + TY L+ Y A + E ++
Sbjct: 217 ILIKSCLHAYDFEKVKSLLADMARAGIP---PNTVTYNTLIDAYGKAGRFAEMESTLLKM 273
Query: 184 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 243
N + N + + S GQ+E + E+ + +VP+I TYN+ +
Sbjct: 274 LSQNCKPDVWTMNSTLRAFGSSGQIETMESCYEKFQASGIVPNIKTYNILL--------- 324
Query: 244 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 303
DS G + + V Y+ + S T+V TY+
Sbjct: 325 ------------DSYGKAKMYEKMGAVMEYMQKYYY----SWTIV------------TYN 356
Query: 304 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 363
+I + G+ ++++ I+ R+ K + N + + S G EV +I +
Sbjct: 357 VVIDAFGRAGDLEQMEYIF---RLMKSERIKPNCVTLCSVVRAYGRAGEVKKIKTALRII 413
Query: 364 ATSD--FDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
SD DI N L+ A+ VG + + L+ + C P
Sbjct: 414 ENSDITLDIVFFNCLVDAYGRVGCLAEMWDILDLMKEHRCKP 455
>gi|242065966|ref|XP_002454272.1| hypothetical protein SORBIDRAFT_04g027800 [Sorghum bicolor]
gi|241934103|gb|EES07248.1| hypothetical protein SORBIDRAFT_04g027800 [Sorghum bicolor]
Length = 519
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 127/307 (41%), Gaps = 44/307 (14%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTK----------------- 136
+ +EL + + LE+ WM + +V + Y+ I +M +
Sbjct: 93 LFEELGRRDAWLQCLEVFRWMQKQRWYVADNGIYSKLISVMGRKGQIRMAMWLFSQMRNS 152
Query: 137 -----------VFGIHSGER-----------YFEGLPLSAK---TSETYTALLHLYAGAK 171
+ G H R YFE + A+ T TY LL +A A
Sbjct: 153 GCKPDTSVYNSLIGAHLHSRDKSKALAKALGYFEKMKCIARCQPTIVTYNILLRAFAQAG 212
Query: 172 WTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYN 231
T++ + LF+ + +S +S + YN ++ Y G ++++ V+ +K K PD+ T+N
Sbjct: 213 DTKQVDILFKDLDESVVSPDIYTYNGVLDAYGKNGMIKEMESVLLRMKSKQCRPDVITFN 272
Query: 232 LWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE 291
+ I S D++++ + S + +++ Y A AE + + E
Sbjct: 273 ILIDSYGRKQIFDKMEQVFKSL-LRSKERPTHPTFNSMITNYGKARLREKAE-YVVKKME 330
Query: 292 KSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLK 351
+ + ++T + LI++YA K Q++ L ++ K+ + +L +Y M G
Sbjct: 331 ELGYKPNYVTQECLIMMYAHCDCVSKARQVFDELVSSQNKVQLSSLNSMLDAYCMNGLHT 390
Query: 352 EVGEIID 358
E +++D
Sbjct: 391 EADQLLD 397
>gi|302801572|ref|XP_002982542.1| hypothetical protein SELMODRAFT_421995 [Selaginella moellendorffii]
gi|300149641|gb|EFJ16295.1| hypothetical protein SELMODRAFT_421995 [Selaginella moellendorffii]
Length = 537
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 80/171 (46%), Gaps = 8/171 (4%)
Query: 62 IFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEF- 120
+ +++P S V++ + E + + + +++ +LR +R K AL I +W+ K F
Sbjct: 112 LLPLTIP--SVGPVVKLTIGEDRKIGLPGILYVVGKLRTFRRSKQALSILDWLAEEKPFG 169
Query: 121 VLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYT-ALLHLYAGAKWTEKAEEL 179
+S Y I + +V +H E+ FE +P + E A+ YA A +K EE+
Sbjct: 170 EFDESLYKLHISIAFEVNSVHKAEKIFESVPKELQLQEKLLGAMAAGYASAHRMDKVEEI 229
Query: 180 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 230
Q NLS Y ++ LY V +K A + + IK + PD+ +
Sbjct: 230 L---LQCNLSAME-PYTALIKLYFRVALYDKAASLYKRIKAAKLEPDLAAF 276
>gi|295828266|gb|ADG37802.1| AT1G07590-like protein [Capsella grandiflora]
Length = 194
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 3/164 (1%)
Query: 193 LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 252
L+YN ++ + G+ + +A + +K +P + TY++ + A NID V K D
Sbjct: 20 LVYNRLIIRNSAPGRRKLIAKDLALMKADKAIPHVSTYHILMKLEANXHNIDGVLKAFDG 79
Query: 253 MSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL 312
M +G + V Y + A AE+ T EKS+T W T D L+ILY L
Sbjct: 80 MK-KAGVEPNEVSYCIXAMAHAVARLYTVAEAYT-EXIEKSVTGDNWSTLDILMILYGRL 137
Query: 313 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 356
G + ++ + W +R + S++Y+ ++ +G+L E+
Sbjct: 138 GKEKELARTWNVIR-GFHHVRSKSYLLATEAFARVGNLDRAEEL 180
>gi|225427240|ref|XP_002278451.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic [Vitis vinifera]
Length = 723
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 69/131 (52%), Gaps = 3/131 (2%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVK 184
Y T ++ M K FE + S ++T TAL+ +Y A+W A EL+ER++
Sbjct: 342 YNTLLEAMGKAGKPGLARSLFEEMVGSGVIPDAKTLTALVKIYGKARWARDALELWERMR 401
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR-KNVVPDIFTYNLWISSCAATLNI 243
+ + ++YN ++++ +G E+ + E++K+ ++ PD ++Y ++ + N+
Sbjct: 402 SNGWPMDFILYNTLLSMCADLGLEEEAEKLFEDMKKSEHCRPDSWSYTAMLNIYGSGGNV 461
Query: 244 DQVKKFLDEMS 254
D+ + DEMS
Sbjct: 462 DRAMQLFDEMS 472
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 123/272 (45%), Gaps = 14/272 (5%)
Query: 95 LKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA 154
+K LR ++++ E++ M++ L + Y+T I + ++FE + +
Sbjct: 206 MKSLRFGRQFQLIEELANEMIS-TGVELDNITYSTIITCAKRCNLFDKAVKWFERMYKTG 264
Query: 155 KTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVA 212
+ TY+A+L +YA E+ L+ER + S + + + + ++ G + +
Sbjct: 265 LMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKPDPIAFAVLGKMFGEAGDYDGIR 324
Query: 213 LVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 272
V++E+K V P++ YN + + + +EM SG D LV I
Sbjct: 325 YVLQEMKSLGVQPNLVVYNTLLEAMGKAGKPGLARSLFEEM-VGSGVIPDAKTLTALVKI 383
Query: 273 YITASHLVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQIWKSLRMT 328
Y A +A +E + + W I Y+ L+ + A LG +++ +++++ ++ +
Sbjct: 384 YGKARWARDA-----LELWERMRSNGWPMDFILYNTLLSMCADLGLEEEAEKLFEDMKKS 438
Query: 329 KQ-KMTSRNYICILSSYLMLGHLKEVGEIIDQ 359
+ + S +Y +L+ Y G++ ++ D+
Sbjct: 439 EHCRPDSWSYTAMLNIYGSGGNVDRAMQLFDE 470
>gi|356527376|ref|XP_003532287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Glycine max]
Length = 515
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 109/249 (43%), Gaps = 7/249 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
Y L+ + K EKA ELF+ + + Y +++ Y G ++K ++EE+
Sbjct: 159 VYIKLIVMLGKCKQPEKAHELFQAMVDEGCVLDCESYTALLSAYSRSGLLDKAFSLLEEM 218
Query: 219 KR-KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
K PD+ TY++ + SC D+++ L +M+ + G + V Y L++ Y A
Sbjct: 219 KNTPGCQPDVQTYSILLKSCLQVFAFDKIQSLLSDMT-NRGIKPNTVTYNTLIDAYGKAR 277
Query: 278 HLVNAESSTLVE--AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
E S LVE A++ W T + + + +G + +++ ++ + + +
Sbjct: 278 KFSEME-SILVEMLADRYCQPDVW-TMNSTLRAFGNIGQIETMEKCYEKFQNAGIQPNVQ 335
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 395
+ +L SY K++ ++ ++ Q + I N ++ AF G ++ L
Sbjct: 336 TFNILLDSYGKAQDYKKMSAVM-EYMQKYHYSWTIVTFNIVIDAFGKAGDLKQMEYLFRL 394
Query: 396 LLQKNCAPT 404
+ + P+
Sbjct: 395 MRSERIKPS 403
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 106/247 (42%), Gaps = 6/247 (2%)
Query: 159 TYTALLHLYAGA-KWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
TY L+ Y A K++E L E + + N + + ++GQ+E + E+
Sbjct: 265 TYNTLIDAYGKARKFSEMESILVEMLADRYCQPDVWTMNSTLRAFGNIGQIETMEKCYEK 324
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
+ + P++ T+N+ + S + ++ ++ M S V + +++ + A
Sbjct: 325 FQNAGIQPNVQTFNILLDSYGKAQDYKKMSAVMEYMQ-KYHYSWTIVTFNIVIDAFGKAG 383
Query: 278 HLVNAESS-TLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 336
L E L+ +E+ + +T L+ YA G +KI + + + + + +
Sbjct: 384 DLKQMEYLFRLMRSER--IKPSCVTLCSLVRAYARAGKPEKISGVLRFVENSDVLLDTVF 441
Query: 337 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 396
+ C++ +Y LG L E+ +++ KQ+ DI ++ ++ G+ A E LL
Sbjct: 442 FNCLVDAYARLGCLAEMKGVLEMMKQNGCKP-DIVTYRTMIKTYTYKGMDSHAKELRELL 500
Query: 397 LQKNCAP 403
N P
Sbjct: 501 PTVNRPP 507
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 69/168 (41%), Gaps = 15/168 (8%)
Query: 77 QRWVSEGNQATVSELRHILKELRKSQRYKHALEISE--------WMVTHKEFVLSDSDYA 128
+++ + G Q V +L K+Q YK + E W + V+ A
Sbjct: 323 EKFQNAGIQPNVQTFNILLDSYGKAQDYKKMSAVMEYMQKYHYSWTIVTFNIVIDAFGKA 382
Query: 129 TRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNL 188
+ M +F + ER + T +L+ YA A EK + V+ S++
Sbjct: 383 GDLKQMEYLFRLMRSERI-------KPSCVTLCSLVRAYARAGKPEKISGVLRFVENSDV 435
Query: 189 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 236
+ + +N ++ Y +G + ++ V+E +K+ PDI TY I +
Sbjct: 436 LLDTVFFNCLVDAYARLGCLAEMKGVLEMMKQNGCKPDIVTYRTMIKT 483
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 68/136 (50%), Gaps = 10/136 (7%)
Query: 195 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEM 253
Y++++ +VEK + EE+KR +VP ++TY + I S C A L I Q +K+ DEM
Sbjct: 463 YSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGL-IQQARKWFDEM 521
Query: 254 SCDSGGSDDWVKYVNLVNIYITASHLVNAE---SSTLVEAEKSITQRQWITYDFLIILYA 310
G + + V Y L++ Y+ A + A+ L+E K +TY LI +
Sbjct: 522 L-HKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKP----NVVTYTALIDGHC 576
Query: 311 GLGNKDKIDQIWKSLR 326
G +K QI+ +R
Sbjct: 577 KAGQIEKACQIYARMR 592
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/355 (18%), Positives = 132/355 (37%), Gaps = 32/355 (9%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
A +I + +G S ++ L + + + A + E M V S Y I
Sbjct: 444 AFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEM-KRNGIVPSVYTYTILI 502
Query: 132 DLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLS 189
D K I ++F+ + T TYTAL+H Y AK A+ELFE +
Sbjct: 503 DSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCK 562
Query: 190 FNALMYNEMMTLYMSVGQVEKVALVVEEIK---------------RKNV-VPDIFTYNLW 233
N + Y ++ + GQ+EK + ++ N P++ TY
Sbjct: 563 PNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGAL 622
Query: 234 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 293
+ + + + LD M G + + Y +++ + L +A+ +E+
Sbjct: 623 VDGLCKANRVKEAHELLDTMLA-HGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERG 681
Query: 294 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 353
+ + F+ L+ +++D + K L + + N + M+ L ++
Sbjct: 682 YSPNLYTYSSFIDCLF----KDNRLDLVLKVLSKMLENSCTPNVVIYTE---MVDGLCKI 734
Query: 354 GEIIDQWK-----QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
G+ + +K + + ++ ++ F G E+ E + K CAP
Sbjct: 735 GKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAP 789
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 47/94 (50%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
YT ++ T++A +L ++++ + N + Y M+ + G++E+ + ++
Sbjct: 724 YTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMC 783
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
K P+ TY + I+ C + +D+ K LDEM
Sbjct: 784 SKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEM 817
>gi|356540307|ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 804
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 3/155 (1%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-EKVALVVEEI 218
YT L++ Y+ + A LF +++Q + + YN ++ +Y +G V +VE +
Sbjct: 196 YTCLINAYSSSGRYRDAVNLFNKMQQDGCNPTLITYNVVLNVYGKMGMPWSNVTALVEAM 255
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + V PD++TYN IS C ++ +M + G + D V Y L++++ S
Sbjct: 256 RSRGVAPDLYTYNTLISCCRRGSLYEEAVHLFQQMKLE-GFTPDKVTYNALLDVF-GKSR 313
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 313
L E E + +TY+ LI YA G
Sbjct: 314 RPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGG 348
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 51/81 (62%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +L+++Y+ ++ +K+EE+ V + + + + YN ++ Y G++++ + + E+
Sbjct: 651 TYNSLMYMYSRSENFQKSEEILREVLEKGMKPDRISYNTVIYAYCRNGRMKEASRIFSEM 710
Query: 219 KRKNVVPDIFTYNLWISSCAA 239
K +VPD+ TYN +I++ AA
Sbjct: 711 KDSALVPDVVTYNTFIATYAA 731
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/264 (18%), Positives = 111/264 (42%), Gaps = 7/264 (2%)
Query: 147 FEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMS 204
F+ + L T + TY ALL ++ ++ ++A ++ + ++ + S ++ YN +++ Y
Sbjct: 287 FQQMKLEGFTPDKVTYNALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAK 346
Query: 205 VGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWV 264
G +E+ + ++ K + PD+FTY +S D + EM G +
Sbjct: 347 GGLLEEALDLKTQMVHKGIKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRA-VGCKPNIC 405
Query: 265 KYVNLVNIYITASHLVNAESSTLVEAEKSIT-QRQWITYDFLIILYAGLGNKDKIDQIWK 323
+ L+ ++ AE + + K +T++ L+ ++ G ++ I+K
Sbjct: 406 TFNALIKMHGNRGKF--AEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFK 463
Query: 324 SLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDV 383
++ + ++S+Y G + + ++ D+S N +L A +
Sbjct: 464 EMKRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSMLEAGVVP-DLSTYNAVLAALARG 522
Query: 384 GLTEKANEFHMLLLQKNCAPTNAS 407
GL E++ + + C P S
Sbjct: 523 GLWEQSEKVLAEMEDGRCKPNELS 546
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 58/314 (18%), Positives = 117/314 (37%), Gaps = 71/314 (22%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+ LL ++ + +F+ +K++ +N +++ Y G ++ V + +
Sbjct: 441 TWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSM 500
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
VVPD+ TYN +++ A +Q +K L EM D + + Y +L++ Y
Sbjct: 501 LEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEME-DGRCKPNELSYSSLLHAYANGKE 559
Query: 279 ---------------------------LVNAESSTLVEAEK------------------- 292
LVN++S L+E E+
Sbjct: 560 IERMNAFAEEIYSGSVETHAVLLKTLVLVNSKSDLLIETERAFLELRRRGISPDITTLNA 619
Query: 293 --SITQRQWI---------------------TYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
SI R+ + TY+ L+ +Y+ N K ++I + +
Sbjct: 620 MLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYSRSENFQKSEEILREVLEKG 679
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
K +Y ++ +Y G +KE I + K SA D+ N + ++ + +A
Sbjct: 680 MKPDRISYNTVIYAYCRNGRMKEASRIFSEMKDSALVP-DVVTYNTFIATYAADSMFAEA 738
Query: 390 NEFHMLLLQKNCAP 403
+ ++++ C P
Sbjct: 739 IDVVRYMIKQGCKP 752
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 104/259 (40%), Gaps = 21/259 (8%)
Query: 62 IFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEF- 120
+F S + A V+Q + G T ++ K + AL++ MV HK
Sbjct: 308 VFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMV-HKGIK 366
Query: 121 --------VLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE-TYTALLHLYAGAK 171
+LS + A + D +VF E + K + T+ AL+ ++
Sbjct: 367 PDVFTYTTLLSGFEKAGKDDFAIQVF--------LEMRAVGCKPNICTFNALIKMHGNRG 418
Query: 172 WTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYN 231
+ ++F+ +K N S + + +N ++ ++ G +V+ + +E+KR V + T+N
Sbjct: 419 KFAEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFN 478
Query: 232 LWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE 291
IS+ + + DQ M ++G D Y N V + L L E E
Sbjct: 479 TLISAYSRCGSFDQAMAVYKSM-LEAGVVPDLSTY-NAVLAALARGGLWEQSEKVLAEME 536
Query: 292 KSITQRQWITYDFLIILYA 310
+ ++Y L+ YA
Sbjct: 537 DGRCKPNELSYSSLLHAYA 555
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 107/250 (42%), Gaps = 13/250 (5%)
Query: 159 TYTALLHLYAGAKWTEKAEELF-ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
TY L+ + A + A +L E +Q ++ MYN + G+V + VV+
Sbjct: 20 TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
+K PD+ T+N I+ +D+ ++ LDEM SG + + V Y L+N +A
Sbjct: 80 MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEME-RSGFAANLVTYNTLINGLSSAG 138
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR-- 335
+ E+ +++ + Q TY+ +I G +ID+ + L KQ+
Sbjct: 139 R--SGEAVLVMQGMTTTPDTQ--TYNAII---HGFCKSGEIDRAYGFLEEMKQRAGCSPD 191
Query: 336 --NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 393
Y +++ +L++ E++ + + A N L+ + ++A E
Sbjct: 192 TFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELL 251
Query: 394 MLLLQKNCAP 403
+L+ CAP
Sbjct: 252 SSMLEHGCAP 261
>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 72/154 (46%), Gaps = 4/154 (2%)
Query: 174 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 233
EKA ++ + + + Y+E++ + +VE + +E+K VVPD++TY +
Sbjct: 471 EKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTIL 530
Query: 234 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL-VNAESSTLVEAEK 292
I + I Q +LDEM D G V Y L++ Y+ A + V E L+ A+
Sbjct: 531 IDCFSKAGIIKQAHNWLDEMVRD-GCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKG 589
Query: 293 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 326
ITY LI Y GN +K QI+ +R
Sbjct: 590 CFP--NVITYTALIDGYCKSGNIEKACQIYARMR 621
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 74/356 (20%), Positives = 130/356 (36%), Gaps = 34/356 (9%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDS-DYATR 130
A VI + G S ++ L + R ++A + + M V+ D Y
Sbjct: 473 AYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEM--KGTGVVPDVYTYTIL 530
Query: 131 IDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQSNL 188
ID +K I + + + T TYT L+H Y AK A ELFE +
Sbjct: 531 IDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGC 590
Query: 189 SFNALMYNEMMTLYMSVGQVEKVALVVEEIK--------------RKNVV--PDIFTYNL 232
N + Y ++ Y G +EK + ++ + NV P++ TY
Sbjct: 591 FPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGA 650
Query: 233 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 292
+ + + L+ M D G + + Y L++ + A+ L A+ E+
Sbjct: 651 LVDGLCKAHKVKDARDLLETMFVD-GCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVER 709
Query: 293 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 352
+ TY LI L ++D + K L + + N I I + M+ L +
Sbjct: 710 GYNPNVY-TYSSLI---DRLFKDKRLDLVLKVLSKMLENSCAPN-IVIYTE--MIDGLSK 762
Query: 353 VGEIIDQWK-----QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
V + + +K + ++ ++ F G +K E + K CAP
Sbjct: 763 VAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAP 818
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 61/317 (19%), Positives = 127/317 (40%), Gaps = 31/317 (9%)
Query: 70 RSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEF--VLSDSDY 127
+ A N + V +G + TV ++ K+++ A E+ E M+ F V++ Y
Sbjct: 541 KQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVIT---Y 597
Query: 128 ATRIDLMTKVFGIHSGERYFEGLPLSAKTSE------------------TYTALLHLYAG 169
ID K I + + + A + TY AL+
Sbjct: 598 TALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCK 657
Query: 170 AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFT 229
A + A +L E + N ++Y+ ++ + ++++ V ++ + P+++T
Sbjct: 658 AHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYT 717
Query: 230 YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVE 289
Y+ I +D V K L +M ++ + + V Y +++ + A L+
Sbjct: 718 YSSLIDRLFKDKRLDLVLKVLSKM-LENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMM 776
Query: 290 AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI---CILSSYLM 346
EK + +TY +I G G K+D+ + R K + N++ +++
Sbjct: 777 EEKG-CKPNVVTYTAMI---DGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCA 832
Query: 347 LGHLKEVGEIIDQWKQS 363
GHL E ++++ KQ+
Sbjct: 833 TGHLDEAYALLEEMKQT 849
>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 72/154 (46%), Gaps = 4/154 (2%)
Query: 174 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 233
EKA ++ + + + Y+E++ + +VE + +E+K VVPD++TY +
Sbjct: 471 EKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTIL 530
Query: 234 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL-VNAESSTLVEAEK 292
I + I Q +LDEM D G V Y L++ Y+ A + V E L+ A+
Sbjct: 531 IDCFSKAGIIKQAHNWLDEMVRD-GCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKG 589
Query: 293 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 326
ITY LI Y GN +K QI+ +R
Sbjct: 590 CFP--NVITYTALIDGYCKSGNIEKACQIYARMR 621
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 74/356 (20%), Positives = 129/356 (36%), Gaps = 34/356 (9%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDS-DYATR 130
A VI + G S ++ L + R ++A + + M V+ D Y
Sbjct: 473 AYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEM--KGTGVVPDVYTYTIL 530
Query: 131 IDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQSNL 188
ID +K I + + + T TYT L+H Y AK A ELFE +
Sbjct: 531 IDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGC 590
Query: 189 SFNALMYNEMMTLYMSVGQVEKVALVVEEIK--------------RKNVV--PDIFTYNL 232
N + Y ++ Y G +EK + ++ + NV P++ TY
Sbjct: 591 FPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGA 650
Query: 233 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 292
+ + + L+ M D G + + Y L++ + A+ L A+ E
Sbjct: 651 LVDGLCKAHKVKDARDLLETMFVD-GCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEH 709
Query: 293 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 352
+ TY LI L ++D + K L + + N I I + M+ L +
Sbjct: 710 GYNPNVY-TYSSLI---DRLFKDKRLDLVLKVLSKMLENSCAPN-IVIYTE--MIDGLSK 762
Query: 353 VGEIIDQWK-----QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
V + + +K + ++ ++ F G +K E + K CAP
Sbjct: 763 VAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAP 818
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 47/94 (50%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
YT ++ + T++A +L +++ N + Y M+ + G+V+K + E+
Sbjct: 753 YTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMG 812
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
K P+ TY + I+ C AT ++D+ L+EM
Sbjct: 813 SKGCAPNFVTYTVLINHCCATGHLDEAYALLEEM 846
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 61/317 (19%), Positives = 126/317 (39%), Gaps = 31/317 (9%)
Query: 70 RSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEF--VLSDSDY 127
+ A N + V +G + TV ++ K+++ A E+ E M+ F V++ Y
Sbjct: 541 KQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVIT---Y 597
Query: 128 ATRIDLMTKVFGIHSGERYFEGLPLSAKTSE------------------TYTALLHLYAG 169
ID K I + + + A + TY AL+
Sbjct: 598 TALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCK 657
Query: 170 AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFT 229
A + A +L E + N ++Y+ ++ + ++++ V ++ P+++T
Sbjct: 658 AHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYT 717
Query: 230 YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVE 289
Y+ I +D V K L +M ++ + + V Y +++ + A L+
Sbjct: 718 YSSLIDRLFKDKRLDLVLKVLSKM-LENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMM 776
Query: 290 AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI---CILSSYLM 346
EK + +TY +I G G K+D+ + R K + N++ +++
Sbjct: 777 EEKG-CKPNVVTYTAMI---DGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCA 832
Query: 347 LGHLKEVGEIIDQWKQS 363
GHL E ++++ KQ+
Sbjct: 833 TGHLDEAYALLEEMKQT 849
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 89/208 (42%), Gaps = 10/208 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+T+L+ G E A EL E + + YN ++ Y QV K +V +
Sbjct: 318 TFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADF 377
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + VP+ TYN+ ++ C DQ ++LD+++ + G V + I +
Sbjct: 378 RSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAI----ILDAL 433
Query: 279 LVNAESSTLVEAEKSITQRQWI--TYDFLIILYAGLGNKDKIDQIWKSL-RMTKQKMTSR 335
+ + V+ + + QR ++ F +++A L + Q + L M K T
Sbjct: 434 CRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFA-LCKAHQPQQAHELLEEMIKYGHTPG 492
Query: 336 NYIC--ILSSYLMLGHLKEVGEIIDQWK 361
C ++S+Y G +++ E+ + +
Sbjct: 493 PGTCDAVVSAYCRAGMIQKADELASELR 520
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 126/344 (36%), Gaps = 58/344 (16%)
Query: 70 RSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYAT 129
R A V+Q VS + + L +++ L R A E+ E M+ H+ + Y+
Sbjct: 56 RDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEML-HRGMAANAITYSA 114
Query: 130 RIDLMTKVFGIHSGERYFEGLPL--------SAKTSETYTALLHLYAGAKWTEKAEELFE 181
+D + K ER E + L A T TY +++ + A+ ++A E
Sbjct: 115 LVDGLCKC------ERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFME 168
Query: 182 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS-CAAT 240
++ + + Y ++ + V + ++ E+ R+ PDI TY+ I C A
Sbjct: 169 QMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAG 228
Query: 241 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI 300
D V F +EMSC I
Sbjct: 229 RLRDAVDIF-EEMSCAP----------------------------------------TAI 247
Query: 301 TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW 360
TY+ LI Y G+ D+ ++ + K Y ++S++ +G L + E+ Q
Sbjct: 248 TYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQM 307
Query: 361 KQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 404
+ S D+ L+ G E A E + ++ C PT
Sbjct: 308 VANKLSP-DVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPT 350
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/254 (19%), Positives = 105/254 (41%), Gaps = 7/254 (2%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
A +++ V+EG + ++ KS+ LE+ VT + F Y+T I
Sbjct: 163 AHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELL-GEVTRRGFTPDIVTYSTVI 221
Query: 132 DLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFN 191
D + K + FE + A T+ TY +L+ Y A ++A L ++ + +
Sbjct: 222 DGLCKAGRLRDAVDIFEEMS-CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPD 280
Query: 192 ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 251
+ Y +M+ + +G+++ + +++ + PD+ T+ + ++ + L+
Sbjct: 281 VVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLE 340
Query: 252 EMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAG 311
E++ G Y +V+ Y A+ + AE + +TY+ L+ AG
Sbjct: 341 EIT-RRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVP-NTVTYNILV---AG 395
Query: 312 LGNKDKIDQIWKSL 325
+ DQ + L
Sbjct: 396 CCRAGRTDQALQYL 409
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 107/250 (42%), Gaps = 13/250 (5%)
Query: 159 TYTALLHLYAGAKWTEKAEELF-ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
TY L+ + A + A +L E +Q ++ MYN + G+V + VV+
Sbjct: 20 TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
+K PD+ T+N I+ +D+ ++ LDEM SG + + V Y L+N +A
Sbjct: 80 MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEME-RSGFAANLVTYNTLINGLSSAG 138
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR-- 335
+ E+ +++ + Q TY+ +I G +ID+ + L KQ+
Sbjct: 139 R--SGEAVLVMQGMTTTPDTQ--TYNAII---HGFCKSGEIDRAYGFLEEMKQRAGCSPD 191
Query: 336 --NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 393
Y +++ +L++ E++ + + A N L+ + ++A E
Sbjct: 192 TFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELL 251
Query: 394 MLLLQKNCAP 403
+L+ CAP
Sbjct: 252 SSMLEHGCAP 261
>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
Length = 754
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 105/253 (41%), Gaps = 10/253 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y ALLH YA A + LF + + + ++N ++ Y +G ++K L+ E++
Sbjct: 295 SYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDM 354
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
++ V PDI T++ IS+ +D + + M D+G D Y L+
Sbjct: 355 TKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHM-IDTGVPPDTAVYSCLIQGQCNRRD 413
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG----NKDKIDQIWKSLRMTKQKMTS 334
LV A+ K I + +I G KD +D I T Q+
Sbjct: 414 LVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIH----TGQRPNL 469
Query: 335 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 394
+ ++ Y ++G++KE ++D +S + DI N L+ + G + A
Sbjct: 470 ITFNSLVDGYCLVGNMKEAVGLLDSM-ESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFR 528
Query: 395 LLLQKNCAPTNAS 407
+L K T+ S
Sbjct: 529 DMLHKRVTLTSVS 541
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 103/227 (45%), Gaps = 15/227 (6%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY++L++ K +KAE + ++ + + N + YN ++ Y + G ++ V +E+
Sbjct: 190 TYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEM 249
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+VPD+ N ++++ I + + D M G D + Y L++ Y TA
Sbjct: 250 SSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVL-KGPKPDVISYGALLHGYATAGC 308
Query: 279 LVNAESS-TLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR-- 335
+ ++ ++ E + R ++ LI YA LG DK +++ MTKQ +
Sbjct: 309 IAGMDNLFNVMVCEGVVPDRH--VFNTLINAYARLGMMDKSLLMFED--MTKQGVNPDII 364
Query: 336 NYICILSSYLMLGHLKEVGE----IIDQWKQSATSDFDI---SACNR 375
+ ++S++ LG L + E +ID T+ + CNR
Sbjct: 365 TFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNR 411
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 66/127 (51%), Gaps = 1/127 (0%)
Query: 151 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 210
P +A T TY L++ Y A+ + +F R+ ++ L + YN ++ + G+V+K
Sbjct: 112 PEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDK 171
Query: 211 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 270
+ +++ + ++P++ TY+ I+ T +D+ ++ L +M +G + + Y L+
Sbjct: 172 AHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQM-VGAGVRPNNMTYNCLI 230
Query: 271 NIYITAS 277
+ Y T+
Sbjct: 231 HGYSTSG 237
>gi|224081220|ref|XP_002306340.1| predicted protein [Populus trichocarpa]
gi|222855789|gb|EEE93336.1| predicted protein [Populus trichocarpa]
Length = 416
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 134/316 (42%), Gaps = 25/316 (7%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTK------VFGIHSGERYF 147
+ +EL K+ ++ LE+ WM + +V + Y+ I +M K + S R
Sbjct: 59 LFEELGKTDKWLQCLEVFRWMQKQRWYVADNGCYSKLISVMGKKGQTRMAMWLFSEMRNS 118
Query: 148 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQ-SNLSFNALMYNEMMTLYMSVG 206
P ++ + TA LH AK KA FE++K N + YN ++ +
Sbjct: 119 GCRPDTSVYNALITAHLHSKDKAKSLTKALAYFEKMKSIERCQPNVVTYNIILRAFAQAR 178
Query: 207 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 266
V +V + ++++ V PDI+TYN + + I +++ L M D D + +
Sbjct: 179 NVNQVNALFKDLEESIVSPDIYTYNGVLDAYGKNGMIREMESVLSRMKIDQ-CKPDIITF 237
Query: 267 VNLVNIYITASHLVNAES---STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 323
L++ Y E S L EK T++ +I+ Y KDK + ++K
Sbjct: 238 NLLIDSYGKKQDFEKMEQVFKSLLRSKEKPTLP----TFNSMIVNYGKARLKDKAESVFK 293
Query: 324 SLRMTKQKMTSRNYICILSSYLMLG---HLKEVGEIIDQWKQSATSDFDISACNRLLGAF 380
+M + T ++I S +M G + + +I D +S + +S N +L +
Sbjct: 294 --KMADMRYTP-SFITFESLIMMYGICDCVSKARDIFDDMVESG-KEVKVSTLNAVLNVY 349
Query: 381 SDVGLTEKANEFHMLL 396
GL +A H+LL
Sbjct: 350 CMNGLHMEA---HILL 362
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 106/247 (42%), Gaps = 3/247 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY AL++ + E AE L ++ + N +++N M+ Y G VEK + +
Sbjct: 290 TYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVM 349
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
++ + DI+TYN ++ KK L M+ + G + ++V Y L++I+
Sbjct: 350 EKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMA-EKGVAPNYVSYTTLISIHAKEGD 408
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+V A + E ++ +TY+ +I Y G+ + ++ K + Y
Sbjct: 409 MVEAR-RLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYA 467
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
++ + + G + + ++ K T ++ A L+ + G +E+A + + +L
Sbjct: 468 GLVHGHCVNGKVDVALRLFEEMKHRGTKP-NVVAYTALVSGLAKEGRSEEAFQLYDDMLA 526
Query: 399 KNCAPTN 405
P +
Sbjct: 527 AGLTPDD 533
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 95/235 (40%), Gaps = 3/235 (1%)
Query: 173 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 232
+ A L + + + + NA YN ++ Y + VA +++E++ + V P + TY +
Sbjct: 164 VDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTI 223
Query: 233 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 292
+ + +I +V+ DEM + D + Y ++N Y ++ A S E
Sbjct: 224 LVDGLSRAGDISKVEAVYDEMKRKNVAGDVYF-YSAVINAYCRGGNVRRA-SEVFDECVG 281
Query: 293 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 352
+ TY LI + +G + + + +++ + ++ Y G +++
Sbjct: 282 HGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEK 341
Query: 353 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
EI ++ + DI N L V E A + ++ +K AP S
Sbjct: 342 ALEIKAVMEKMGI-ELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVS 395
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/196 (16%), Positives = 87/196 (44%), Gaps = 8/196 (4%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y+A+++ Y +A E+F+ + N Y ++ + +GQ+E +++ +++
Sbjct: 256 YSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQ 315
Query: 220 RKNVVPDIFTYNLWISSCAATLNID---QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
+ V + +N I ++ ++K +++M + D Y L
Sbjct: 316 LRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIEL----DIYTYNTLACGLCRV 371
Query: 277 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 336
+ + +A+ + AEK + +++Y LI ++A G+ + ++++ + + +
Sbjct: 372 NRMEDAKKLLHIMAEKGVAP-NYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVT 430
Query: 337 YICILSSYLMLGHLKE 352
Y ++ Y+ G ++E
Sbjct: 431 YNVMIDGYIKNGSIRE 446
>gi|297823043|ref|XP_002879404.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325243|gb|EFH55663.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 86/187 (45%), Gaps = 4/187 (2%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
+S TY AL+ AE L ++ ++ +++N ++ Y G +++ +++
Sbjct: 344 SSHTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLINGYCRKGMIDEASMIY 403
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLN-IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274
+ +++K D+FT N I+SC L D+ K++L M + G V Y NL+++Y
Sbjct: 404 DVMEKKGFQADVFTCNT-IASCFNRLKRYDEAKQWLFRM-MEGGVRLSTVSYTNLIDVYC 461
Query: 275 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 334
++ A+ VE Q ITY+ +I Y G + ++W +++ S
Sbjct: 462 KEGNVEEAKR-LFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEARKLWANMKANGMDPDS 520
Query: 335 RNYICIL 341
Y ++
Sbjct: 521 YTYTSLI 527
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+YT L+ +Y E+A+ LF + + NA+ YN M+ Y G+V++ + +
Sbjct: 452 SYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEARKLWANM 511
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 254
K + PD +TY I N+D+ + EM
Sbjct: 512 KANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMG 547
>gi|356563451|ref|XP_003549976.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic-like [Glycine max]
Length = 714
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
+T TA++ +Y A+W+ A EL++R+K++ + ++YN ++ + VG VE+ + +
Sbjct: 365 KTLTAVIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRD 424
Query: 218 IKRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSG 258
+K+ + PD ++Y ++ + ++D+ K +EM C SG
Sbjct: 425 MKQSAHCKPDSWSYTAMLNIYGSQGDVDKAMKLFNEM-CKSG 465
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 99/241 (41%), Gaps = 5/241 (2%)
Query: 149 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 208
G+PL + TY+ ++ +KA FER+ +++L + + Y+ ++ +Y +G+V
Sbjct: 219 GVPLD---NITYSTIISCAKKCNLYDKAVHWFERMYKTSLMPDEVTYSAILDVYARLGKV 275
Query: 209 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268
E+V + E + PD T+++ + D ++ EM G + V Y
Sbjct: 276 EEVISLYERGRATGWKPDPITFSVLGKMFGEAGDYDGIRYVFQEME-SVGVQPNLVVYNT 334
Query: 269 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 328
L+ A V A E I + + I ++D + ++W+ ++
Sbjct: 335 LLEAMGKAGKPVFARGLFEEMIELGIVPNEKTLTAVIKIYGKARWSRDAL-ELWQRMKEN 393
Query: 329 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEK 388
M Y +L+ +G ++E + KQSA D + +L + G +K
Sbjct: 394 GWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSAHCKPDSWSYTAMLNIYGSQGDVDK 453
Query: 389 A 389
A
Sbjct: 454 A 454
>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 966
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 4/171 (2%)
Query: 168 AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 227
G EKA ++ + + + +A Y +++T +V+K L+ +E+K+ V PD+
Sbjct: 428 CGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDV 487
Query: 228 FTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESST 286
+TY + I S C A L I+Q + + DEM +G S + V Y L++ Y+ + L A +
Sbjct: 488 YTYTILIDSFCKAGL-IEQAQSWFDEMR-SAGCSPNVVTYTALLHAYLKSKQLYQA-NDI 544
Query: 287 LVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
ITY LI G K +++ L T + S Y
Sbjct: 545 FHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFY 595
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 115/285 (40%), Gaps = 36/285 (12%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE---TYTALLHLYAGAKWTEKAEELFERV 183
Y ID K I + +F+ + SA S TYTALLH Y +K +A ++F R+
Sbjct: 490 YTILIDSFCKAGLIEQAQSWFDEMR-SAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRM 548
Query: 184 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI--KRKNVVPDIFTYNLWISSCAATL 241
NA+ Y+ ++ G+++K V ++ N+ D +
Sbjct: 549 VGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEG---------K 599
Query: 242 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI-TQRQWI 300
+ D + S + V Y LVN A + +A L++A + + I
Sbjct: 600 DTDTI-------------SPNVVTYGALVNGLCKAQKVSDAHD--LLDAMLAAGCEPNQI 644
Query: 301 TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM--TSRNYICILSSYLMLGHLKEVGEIID 358
YD L+ + +G D +++ LRMTK + Y ++ G L +++
Sbjct: 645 VYDALVDGFCKVGEIDSAQEVF--LRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLS 702
Query: 359 QWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
Q + + + ++ ++ G TEKA L+ +K C+P
Sbjct: 703 QMLKDSCNP-NVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSP 746
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 38/82 (46%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYTA++ TEKA L +++ S N + Y ++ G+V+ + ++
Sbjct: 715 TYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQM 774
Query: 219 KRKNVVPDIFTYNLWISSCAAT 240
K K P+ TY + I+ C A
Sbjct: 775 KTKGCAPNYVTYRILINHCCAA 796
>gi|28393724|gb|AAO42273.1| unknown protein [Arabidopsis thaliana]
Length = 642
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY+AL+ Y + A LF+ +K + + +Y ++ +Y VG+VEK + EE+
Sbjct: 235 TYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEM 294
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 272
KR P ++TY I +D+ F +M D G + D V NL+NI
Sbjct: 295 KRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRD-GLTPDVVFLNNLMNI 347
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 109/282 (38%), Gaps = 39/282 (13%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY-------------------- 195
T + YT LL +Y EKA +LFE +K++ S Y
Sbjct: 267 TEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFY 326
Query: 196 ---------------NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC-AA 239
N +M + VG+VE++ V E+ P + +YN I + +
Sbjct: 327 KDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFES 386
Query: 240 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 299
++ +V + D+M DS ++ Y L++ Y + + A L E ++
Sbjct: 387 KAHVSEVSSWFDKMKADSVSPSEFT-YSILIDGYCKTNRVEKA-LLLLEEMDEKGFPPCP 444
Query: 300 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 359
Y LI + D+++K L+ ++SR Y ++ + G L E ++ ++
Sbjct: 445 AAYCSLINALGKAKRYEAADELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNE 504
Query: 360 WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 401
K + D+ A N L+ G+ +AN + + C
Sbjct: 505 MKNQGSGP-DVYAYNALMSGMVKAGMINEANSLLRKMEENGC 545
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 119/277 (42%), Gaps = 20/277 (7%)
Query: 86 ATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSD--YATRIDLMTKVFGIHSG 143
TV ++K L +S+ H E+S W K +S S+ Y+ ID K +
Sbjct: 371 PTVVSYNTVIKALFESK--AHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKA 428
Query: 144 ERYFE-----GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEM 198
E G P Y +L++ AK E A+ELF+ +K++ + ++ +Y M
Sbjct: 429 LLLLEEMDEKGFP---PCPAAYCSLINALGKAKRYEAADELFKELKENFGNVSSRVYAVM 485
Query: 199 MTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSG 258
+ + G++ + + E+K + PD++ YN +S I++ L +M +
Sbjct: 486 IKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGC 545
Query: 259 GSDDWVKYVNLVNIYIT--ASHLVNAESSTLVEAEK-SITQRQWITYDFLIILYAGLGNK 315
+D +N NI + A V + + E K S + +TY+ L+ +A G
Sbjct: 546 RAD-----INSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMF 600
Query: 316 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 352
++ ++ + ++ + + Y IL + + H K+
Sbjct: 601 EEAARMMREMKDKGFEYDAITYSSILDAVGNVDHEKD 637
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 66/163 (40%), Gaps = 6/163 (3%)
Query: 161 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI-K 219
+ L+ AK KA +F + K + YN ++ + M GQ EKV V E+
Sbjct: 166 SELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCN 225
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
+ PD TY+ ISS D + DEM + + + Y L+ IY +
Sbjct: 226 EGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKI-YTTLLGIYFKVGKV 284
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 322
A E +++ TY LI GLG ++D+ +
Sbjct: 285 EKA-LDLFEEMKRAGCSPTVYTYTELI---KGLGKAGRVDEAY 323
>gi|356529889|ref|XP_003533519.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
chloroplastic-like [Glycine max]
Length = 526
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 127/282 (45%), Gaps = 14/282 (4%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVK 184
YA+ ++ + I G R +P S K + LL LYA + + A +LF+++
Sbjct: 93 YASLLETCYRFQAILHGIRVHRLIPTSLLHKNVGISSKLLRLYASCGYLDDAHDLFDQMA 152
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
+ + S A +N +++ Y VG ++ + ++ + V D+FT+ + CA ++
Sbjct: 153 KRDTS--AFPWNSLISGYAQVGHYDEAIALYFQMVEEGVEADLFTFPRVLKVCAGIGSV- 209
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 304
QV + + + +G + D LV++Y +V A + + R ++++
Sbjct: 210 QVGEEVHRHAIRAGFAADGFILNALVDMYSKCGDIVKAR-----KVFDKMPHRDPVSWNS 264
Query: 305 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
++ Y G + + I++ + + + S + +L+ LG +G I W S
Sbjct: 265 MLTAYVHHGLEVQAMNIFRQMLLEGCEPDSVSISTVLTGVSSLG----LGVQIHGWVISQ 320
Query: 365 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNA 406
++++S N L+ +S+ G EKA L+ +++ N+
Sbjct: 321 GHEWNLSIANSLIMMYSNHGRLEKARWVFNLMPERDVVSWNS 362
>gi|302764528|ref|XP_002965685.1| hypothetical protein SELMODRAFT_407276 [Selaginella moellendorffii]
gi|300166499|gb|EFJ33105.1| hypothetical protein SELMODRAFT_407276 [Selaginella moellendorffii]
Length = 949
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/336 (18%), Positives = 139/336 (41%), Gaps = 40/336 (11%)
Query: 56 DDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMV 115
DD +++ + K +++W+ GN + L I L K +RY +++ E +
Sbjct: 111 DDKITKLLEMIESKPDTFEAVKKWMRRGNCLSSDVLSTIYFWLMKRKRYTEIMKLLEGIR 170
Query: 116 THKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEK 175
+ +D I ++++ G+ ER+++ LP +T L A K
Sbjct: 171 CERLVKFTDMHCVWAIGVISRRRGMAKAERFYDSLPEKLRTDRVTVGLFLSVAKENGLAK 230
Query: 176 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
AE+ E+++ + + MM LY++ + KV + E ++ + P + TY L +
Sbjct: 231 AEQWLEKIQVHTTD----ILDVMMVLYLNRDKHHKVVEMFERMRGLGLQPSVRTY-LMLL 285
Query: 236 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 295
C D+ L+ + ++ G A ++ E L
Sbjct: 286 KCK-----DRGAGGLNAIEGEALG----------------AVQTMDVEDPPLR------- 317
Query: 296 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 355
T + + +Y +G +D I+++W+SL+ T+ + +Y +++ ++G + +
Sbjct: 318 -----TLNDAMEVYGYVGKQDGIEELWRSLKRTRSDIHQSSYFSAITALGLVGEVAKARA 372
Query: 356 IIDQWKQSAT--SDFDISACNRLLGAFSDVGLTEKA 389
+ + + + F+ + +L ++ G+ EKA
Sbjct: 373 LCKELLAGSDEFTKFEQNPHALMLEVYARNGMMEKA 408
>gi|302766812|ref|XP_002966826.1| hypothetical protein SELMODRAFT_11024 [Selaginella moellendorffii]
gi|300164817|gb|EFJ31425.1| hypothetical protein SELMODRAFT_11024 [Selaginella moellendorffii]
Length = 484
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 112/237 (47%), Gaps = 15/237 (6%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSN-LSFNALMYNEMMTLYMSVGQVEKVALVVE 216
E YT + K +A++L +++++ + L+ +++ +N ++ + + GQ+E+ VV+
Sbjct: 52 ECYTVAIAEVVAEKKMSEAQQLLKQMEEEDGLAPDSVCFNTVINGWCNEGQMEEAMRVVQ 111
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM---SCDSGGSDDWVKYVNLVNIY 273
E+++KN P TYN I +Q ++ + + + +S S+D ++ V N+
Sbjct: 112 EMRQKNCRPTTSTYNTLIKGYGVAGQAEQAQQLVLHLLNKTRNSPSSEDGLEPVARPNLR 171
Query: 274 ITASHLVNA--ESSTLVEAEKSIT-------QRQWITYDFLIILYAGLGNKDKIDQIWKS 324
T + L+NA L EA + + Q +TY+ L YA G +++ +
Sbjct: 172 -TMNTLLNAWCREGRLEEAWRVVAMIKSAGMQPDAVTYNTLAKAYAAAGRVAELEDLIAD 230
Query: 325 LRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFS 381
++ + K R Y ++S Y G + +++ + K D+ A N LL +S
Sbjct: 231 MKNARLKPNLRTYAILISCYCQNGMPERGLQLLSRLKFEGLHP-DVVAFNTLLKGYS 286
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 32/161 (19%), Positives = 70/161 (43%), Gaps = 5/161 (3%)
Query: 75 VIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLM 134
VI W +EG + E +++E+R+ + + + ++ + L+
Sbjct: 93 VINGWCNEGQ---MEEAMRVVQEMRQKNCRPTTSTYNTLIKGYGVAGQAEQAQQLVLHLL 149
Query: 135 TKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALM 194
K S E E P++ T LL+ + E+A + +K + + +A+
Sbjct: 150 NKTRNSPSSEDGLE--PVARPNLRTMNTLLNAWCREGRLEEAWRVVAMIKSAGMQPDAVT 207
Query: 195 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
YN + Y + G+V ++ ++ ++K + P++ TY + IS
Sbjct: 208 YNTLAKAYAAAGRVAELEDLIADMKNARLKPNLRTYAILIS 248
>gi|162460162|ref|NP_001106062.1| pentatricopeptide repeat 5 [Zea mays]
gi|154520281|gb|ABS82814.1| pentatricopeptide repeat protein 5 [Zea mays]
gi|413924537|gb|AFW64469.1| pentatricopeptide repeat 5 [Zea mays]
Length = 499
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 100/217 (46%), Gaps = 7/217 (3%)
Query: 146 YFEGLPL---SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY 202
YFE + T TY LL +A A T++ + LF+ + +S +S + YN ++ Y
Sbjct: 185 YFEKMKCIERCQPTIVTYNILLRAFAQAGDTKQVDMLFKDLDESVVSPDVYTYNGVLDAY 244
Query: 203 MSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 262
G ++++ V+ +K PD+ T+N+ I S D++++ + S
Sbjct: 245 GKNGMIKEMESVLVRMKSTQCRPDVITFNILIDSYGRKQTFDKMEQVFKSL-LRSKERPT 303
Query: 263 WVKYVNLVNIYITASHLVNAESSTLVEAEKSIT-QRQWITYDFLIILYAGLGNKDKIDQI 321
+ +++ Y A AES +VE + + + ++T + LII+YA K Q+
Sbjct: 304 HPTFNSMITNYGRARLREKAES--VVEKMEELGFKPNYVTQECLIIMYAHCDCVSKARQV 361
Query: 322 WKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 358
+ L ++ K+ + +L +Y M G E ++D
Sbjct: 362 FDELVTSQTKVHLSSLNSMLEAYCMNGLHTEADRLLD 398
>gi|357124917|ref|XP_003564143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Brachypodium distachyon]
Length = 1285
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 92/209 (44%), Gaps = 12/209 (5%)
Query: 147 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNL-----SFNALMYNEMMTL 201
F LP T + + A++ +YA + + +L + ++ L SFN L+ +
Sbjct: 55 FPHLP--GATVQVFNAMMGVYARSGRFDDVRQLLDAMRGQELEPDLVSFNTLINARAKSG 112
Query: 202 YMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD 261
++ G + L E+++ + PD+ TYN IS+C+ N+D +EM D
Sbjct: 113 CLAPGSAFDLLL---EVRQVGLRPDVITYNTLISACSQGSNLDDAVAVFEEMMASECRPD 169
Query: 262 DWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQI 321
W Y +V+++ +AE EK + +TY+ L+ +A G+ D ++++
Sbjct: 170 LWT-YNAMVSVHGRCGKAQDAERMFRELVEKGF-KPDAVTYNSLLYAFAKEGDADTVERV 227
Query: 322 WKSLRMTKQKMTSRNYICILSSYLMLGHL 350
+ L K Y ++ Y +G L
Sbjct: 228 CEELVRAGFKKDGITYNTMIHMYGKMGRL 256
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 75/183 (40%), Gaps = 2/183 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY A++ ++ + AE +F + + +A+ YN ++ + G + V V EE+
Sbjct: 172 TYNAMVSVHGRCGKAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEEL 231
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
R D TYN I +D DEM G + D V Y L++
Sbjct: 232 VRAGFKKDGITYNTMIHMYGKMGRLDLALGLYDEMRA-LGCTPDAVTYTVLIDSLGKMDR 290
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ +A L E + + +T+ LI YA G +++ + + + + K Y+
Sbjct: 291 ISDA-GKVLEEMADAGLKPTLVTFSALICAYAKGGRREEAVRTFSHMVASGVKPDRLAYL 349
Query: 339 CIL 341
+L
Sbjct: 350 VML 352
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
E+Y +LL AK E+AE+LFE ++ N +Y+ +M +Y K ++
Sbjct: 835 ESYKSLLAASGKAKLWEQAEQLFEEIRSKGYRLNRSLYHMLMKIYRDACNHSKAEQLLAS 894
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 257
+K + P I T ++ ++S + D+ +K L+ + S
Sbjct: 895 MKEDGIEPTIATMHILMTSYGTAGHPDEAEKVLNSLKSSS 934
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 85/186 (45%), Gaps = 2/186 (1%)
Query: 163 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 222
LL +Y G +K E++ + ++ L N YN ++ +Y + E+ ++ E+ +K
Sbjct: 770 LLLMYTGNGNFDKTVEVYHSILEAGLEPNEDTYNTLIVMYSRNLRPEEGFTLLNEMGKKG 829
Query: 223 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 282
+ P + +Y +++ +Q ++ +E+ G + Y L+ IY A + A
Sbjct: 830 LTPKLESYKSLLAASGKAKLWEQAEQLFEEIR-SKGYRLNRSLYHMLMKIYRDACNHSKA 888
Query: 283 ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILS 342
E E I + T L+ Y G+ D+ +++ SL+ + ++++ Y + +
Sbjct: 889 EQLLASMKEDGI-EPTIATMHILMTSYGTAGHPDEAEKVLNSLKSSSLEVSTLPYSTVFN 947
Query: 343 SYLMLG 348
+YL G
Sbjct: 948 AYLKNG 953
>gi|15233259|ref|NP_188222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274469|sp|Q9LW84.1|PP236_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16010
gi|9294448|dbj|BAB02667.1| unnamed protein product [Arabidopsis thaliana]
gi|332642241|gb|AEE75762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 642
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY+AL+ Y + A LF+ +K + + +Y ++ +Y VG+VEK + EE+
Sbjct: 235 TYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEM 294
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 272
KR P ++TY I +D+ F +M D G + D V NL+NI
Sbjct: 295 KRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRD-GLTPDVVFLNNLMNI 347
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 109/282 (38%), Gaps = 39/282 (13%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY-------------------- 195
T + YT LL +Y EKA +LFE +K++ S Y
Sbjct: 267 TEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFY 326
Query: 196 ---------------NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC-AA 239
N +M + VG+VE++ V E+ P + +YN I + +
Sbjct: 327 KDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFES 386
Query: 240 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 299
++ +V + D+M DS ++ Y L++ Y + + A L E ++
Sbjct: 387 KAHVSEVSSWFDKMKADSVSPSEFT-YSILIDGYCKTNRVEKA-LLLLEEMDEKGFPPCP 444
Query: 300 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 359
Y LI + ++++K L+ ++SR Y ++ + G L E ++ ++
Sbjct: 445 AAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNE 504
Query: 360 WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 401
K + D+ A N L+ G+ +AN + + C
Sbjct: 505 MKNQGSGP-DVYAYNALMSGMVKAGMINEANSLLRKMEENGC 545
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 118/277 (42%), Gaps = 20/277 (7%)
Query: 86 ATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSD--YATRIDLMTKVFGIHSG 143
TV ++K L +S+ H E+S W K +S S+ Y+ ID K +
Sbjct: 371 PTVVSYNTVIKALFESK--AHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKA 428
Query: 144 ERYFE-----GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEM 198
E G P Y +L++ AK E A ELF+ +K++ + ++ +Y M
Sbjct: 429 LLLLEEMDEKGFP---PCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVM 485
Query: 199 MTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSG 258
+ + G++ + + E+K + PD++ YN +S I++ L +M +
Sbjct: 486 IKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGC 545
Query: 259 GSDDWVKYVNLVNIYIT--ASHLVNAESSTLVEAEK-SITQRQWITYDFLIILYAGLGNK 315
+D +N NI + A V + + E K S + +TY+ L+ +A G
Sbjct: 546 RAD-----INSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMF 600
Query: 316 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 352
++ ++ + ++ + + Y IL + + H K+
Sbjct: 601 EEAARMMREMKDKGFEYDAITYSSILDAVGNVDHEKD 637
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 66/163 (40%), Gaps = 6/163 (3%)
Query: 161 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI-K 219
+ L+ AK KA +F + K + YN ++ + M GQ EKV V E+
Sbjct: 166 SELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCN 225
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
+ PD TY+ ISS D + DEM + + + Y L+ IY +
Sbjct: 226 EGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKI-YTTLLGIYFKVGKV 284
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 322
A E +++ TY LI GLG ++D+ +
Sbjct: 285 EKA-LDLFEEMKRAGCSPTVYTYTELI---KGLGKAGRVDEAY 323
>gi|356547408|ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Glycine max]
Length = 631
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY+AL+ +A + A LF+ +K++ L A +Y +M +Y VG+VE+ +V+E+
Sbjct: 226 TYSALISAFAKLNRDDSAIRLFDEMKENGLQPTAKIYTTLMGIYFKVGKVEEALGLVKEM 285
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + + +FTY I + ++ M D G D V NL+NI ++H
Sbjct: 286 RARRCLLTVFTYTELIRGLGKSGRVEDAYMTYKNMLKD-GCKPDVVLMNNLINILGRSNH 344
Query: 279 LVNA 282
L +A
Sbjct: 345 LRDA 348
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 98/235 (41%), Gaps = 10/235 (4%)
Query: 159 TYTALLH-LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
TY ++ L+ +A FER+K+ + ++ Y+ ++ Y +VEK L++EE
Sbjct: 366 TYNTIIKSLFEAKAPLSEASSWFERMKKDGIVPSSFTYSILIDGYCKTNRVEKALLLLEE 425
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
+ K P Y I++ D + E+ + G S V Y ++ +
Sbjct: 426 MDEKGFPPCPAAYCSLINTLGVAKRYDVANELFQELKENCGCSSARV-YAVMIKHFGKCG 484
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN- 336
L N + E +K Y+ L+ G+ +++D+ + R ++ + +
Sbjct: 485 RL-NEAINLFNEMKKLGCTPDVYAYNALM---TGMVRAERMDEAFSLFRTMEENGCTPDI 540
Query: 337 --YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
+ IL+ G K E+ + K S T D+ + N +LG S GL E+A
Sbjct: 541 NSHNIILNGLARTGGPKGALEMFTKMKNS-TIKPDVVSFNTILGCLSRAGLFEEA 594
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 9/203 (4%)
Query: 163 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV-ALVVEEIKRK 221
++ + AK +A +F +VK A YN ++ + M G EKV L E
Sbjct: 159 IVRILGKAKMVNRALSVFYQVKGRKCRPTASTYNSIILMLMQEGHHEKVHELYNEMCSEV 218
Query: 222 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 281
+ PD TY+ IS+ A D + DEM ++G Y L+ IY +
Sbjct: 219 HCFPDTVTYSALISAFAKLNRDDSAIRLFDEMK-ENGLQPTAKIYTTLMGIYFKVGKV-- 275
Query: 282 AESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICIL 341
E+ LV+ ++ +R +T L GLG +++ + + + + + + +
Sbjct: 276 EEALGLVKEMRA--RRCLLTVFTYTELIRGLGKSGRVEDAYMTYKNMLKDGCKPDVVLMN 333
Query: 342 SSYLMLG---HLKEVGEIIDQWK 361
+ +LG HL++ ++ D+ K
Sbjct: 334 NLINILGRSNHLRDAIKLFDEMK 356
>gi|302798617|ref|XP_002981068.1| hypothetical protein SELMODRAFT_420699 [Selaginella moellendorffii]
gi|300151122|gb|EFJ17769.1| hypothetical protein SELMODRAFT_420699 [Selaginella moellendorffii]
Length = 537
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 80/171 (46%), Gaps = 8/171 (4%)
Query: 62 IFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEF- 120
+ +++P S V++ + E + + + +++ +LR +R K AL I +W+ K F
Sbjct: 112 LLPLTIP--SVGPVVKLTIGEDRKIGLPGILYVVGKLRTFRRSKQALSILDWLAEEKPFG 169
Query: 121 VLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYT-ALLHLYAGAKWTEKAEEL 179
+S Y I + +V +H E+ FE +P + E A+ YA A +K EE+
Sbjct: 170 EFDESLYKLHISIAFEVNSVHKAEKIFESVPKELQLQEKLLGAMAAGYASAHRMDKVEEI 229
Query: 180 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 230
Q NLS Y ++ LY V +K A + + IK + PD+ +
Sbjct: 230 L---LQCNLSAME-PYTALIKLYFRVALYDKAASLYKRIKAAKLEPDLAAF 276
>gi|168024876|ref|XP_001764961.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683770|gb|EDQ70177.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 743
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 97/229 (42%), Gaps = 9/229 (3%)
Query: 164 LHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNV 223
L+ Y E+AE + + V++S +S + YN M+T Y +K A +VE+++ +++
Sbjct: 158 LNTYGQQGKIEEAERIMDTVEESGMSLGLVGYNSMITAYGKACLYDKAARLVEKMREEDL 217
Query: 224 VPDIFTYNLWISSCAATLNIDQVKKFLDEM---SCDSGGSDDWVKYVNLVNIYITASHLV 280
VPD TY+ I +C + + + EM S+ + L+++Y A V
Sbjct: 218 VPDSITYSCMIGACGRVGKLKEALSWFAEMKRLEIKPASSN----FNTLISLYGKAKD-V 272
Query: 281 NAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICI 340
+ E +K + W T D + Y G + +I LR + +Y +
Sbjct: 273 EGIVRVITEMKKYGCKPDWQTLDAAVRAYDRAGLIKDVTEILNLLRDAGWVEETGSYGTL 332
Query: 341 LSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
L YL KE I +++ + + C L+ F D + + A
Sbjct: 333 LHVYLKCNLPKEALRIFLAMRKAGMAPKEY-MCRSLICTFRDAEMFDGA 380
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 108/240 (45%), Gaps = 8/240 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY+ +L LY + +AE +F + S + + Y+ M+ LY G EK +V E+
Sbjct: 84 TYSMMLLLYQRHRKVAEAESVFSHMLNSGVQ-AVVAYSVMIALYNREGLFEKSEQIVTEM 142
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+R NV PD + +++ I++ ++ +D + +SG S V Y +++ Y A
Sbjct: 143 RRNNVTPDRDNWLKQLNTYGQQGKIEEAERIMDTVE-ESGMSLGLVGYNSMITAYGKAC- 200
Query: 279 LVNAESSTLVEA--EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 336
+ +++ LVE E+ + ITY +I +G + + ++ + K S N
Sbjct: 201 -LYDKAARLVEKMREEDLVPDS-ITYSCMIGACGRVGKLKEALSWFAEMKRLEIKPASSN 258
Query: 337 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 396
+ ++S Y ++ + +I + K+ D + + A+ GL + E LL
Sbjct: 259 FNTLISLYGKAKDVEGIVRVITEMKKYGCKP-DWQTLDAAVRAYDRAGLIKDVTEILNLL 317
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
E Y ++L Y A EK ++ R++ S + + YN ++ Y + ++ +
Sbjct: 606 EAYNSILDAYGKAGQMEKVSDVLARMENSGMRMDLASYNILINTYGKNYMIAEMETLFRT 665
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
++ + VVPD +TYN I + D+ + M D+G S D V Y+ LV+ + A
Sbjct: 666 MQEEGVVPDRWTYNTIIRTYGFADYPDRAVYWFKAMQ-DAGISPDRVTYMILVSTFERAG 724
Query: 278 HLVNA 282
++ A
Sbjct: 725 NIDEA 729
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 91/212 (42%), Gaps = 9/212 (4%)
Query: 127 YATRIDLMTKVFGIHS-GERYFEGLPLSAKTSE----TYTALLHLYAGAKWTEKAEELFE 181
Y ++M ++G ER + L L+ + +++ L+H YA + E
Sbjct: 535 YNITFNVMIDLYGKAGMPERAHKALKLAQQFGSADKISFSTLVHAYAKKQDFPNMEAALW 594
Query: 182 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL 241
++ + + YN ++ Y GQ+EKV+ V+ ++ + D+ +YN+ I++
Sbjct: 595 EMQNAGYGSSLEAYNSILDAYGKAGQMEKVSDVLARMENSGMRMDLASYNILINTYGKNY 654
Query: 242 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWIT 301
I +++ M + D W Y ++ Y A + A + I+ + +T
Sbjct: 655 MIAEMETLFRTMQEEGVVPDRWT-YNTIIRTYGFADYPDRAVYWFKAMQDAGISPDR-VT 712
Query: 302 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
Y L+ + GN D+ + W LRM++ T
Sbjct: 713 YMILVSTFERAGNIDEAAR-W-CLRMSQAGYT 742
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 79/184 (42%), Gaps = 12/184 (6%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y +++ Y A +KA L E++++ +L +++ Y+ M+ VG++++ E+K
Sbjct: 189 YNSMITAYGKACLYDKAARLVEKMREEDLVPDSITYSCMIGACGRVGKLKEALSWFAEMK 248
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
R + P +N IS +++ + + + EM G DW V Y A +
Sbjct: 249 RLEIKPASSNFNTLISLYGKAKDVEGIVRVITEMK-KYGCKPDWQTLDAAVRAYDRAGLI 307
Query: 280 VNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
+ + E + W+ +Y L+ +Y + +I+ L M K M +
Sbjct: 308 KD-----VTEILNLLRDAGWVEETGSYGTLLHVYLKCNLPKEALRIF--LAMRKAGMAPK 360
Query: 336 NYIC 339
Y+C
Sbjct: 361 EYMC 364
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/233 (18%), Positives = 98/233 (42%), Gaps = 2/233 (0%)
Query: 175 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 234
+A E E ++ L N + Y+ +M Y +G E ++E ++RK + P++ TY L +
Sbjct: 236 QAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLV 295
Query: 235 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 294
+++ ++ + EM D V Y ++N Y + +A + E +
Sbjct: 296 KGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDA-TRVRNEMRDAG 354
Query: 295 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 354
Y+ +I LG +++ ++ + + + +Y ++ Y G +++
Sbjct: 355 IHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAF 414
Query: 355 EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
E+ ++ + ++ N LL F + + A L+L++ AP S
Sbjct: 415 EMCRMMVRNGLAATTLTY-NTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEIS 466
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 99/232 (42%), Gaps = 4/232 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
Y A++ Y G WTE A + E +++ LS N + Y ++ Y G++E+ VV+E+
Sbjct: 255 AYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEM 314
Query: 219 KRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
K ++V D Y + I+ +D + +EM D+G + Y ++N
Sbjct: 315 KETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMR-DAGIHVNLFVYNTMINGLCKLG 373
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
+ + L E E + +Y+ LI Y G+ K ++ + + T+ Y
Sbjct: 374 RMEEVQ-KVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTY 432
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
+L + L + + + + + +IS C+ LL G TE+A
Sbjct: 433 NTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEIS-CSTLLDGLFKAGKTEQA 483
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 99/232 (42%), Gaps = 22/232 (9%)
Query: 174 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 233
+K + + + N +M+N ++ G++ + E ++ K +PD FTY+
Sbjct: 682 DKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSL 741
Query: 234 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 293
I CAA+ +ID+ D M +G + + + Y +L+ + L A + K
Sbjct: 742 IHGCAASGSIDEAFSLRDVM-LSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKG 800
Query: 294 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 353
I+ ITY+ LI Y G K + +K KQKM G+++E
Sbjct: 801 ISP-NGITYNTLIDEYCKEG---KTTEAFK----LKQKMVEE------------GYMEEA 840
Query: 354 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 405
+++DQ ++ I+ C L+ + G E+ ++ + + + PTN
Sbjct: 841 IKLLDQMIENNVDPNYITYCT-LIHGYIKSGNMEEISKLYDEMHIRGLLPTN 891
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 25/122 (20%), Positives = 53/122 (43%), Gaps = 16/122 (13%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ----------- 207
TY +L++ + +A LF +++ +S N + YN ++ Y G+
Sbjct: 772 TYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKM 831
Query: 208 -----VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 262
+E+ +++++ NV P+ TY I + N++++ K DEM +
Sbjct: 832 VEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTN 891
Query: 263 WV 264
W+
Sbjct: 892 WI 893
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/330 (19%), Positives = 129/330 (39%), Gaps = 13/330 (3%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDS-DYATR 130
A +V+ G V L +LK +S + A+ + M + + V+ D Y T
Sbjct: 96 AFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTL 155
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKTSE---TYTALLHLYAGAKWTEKAEELFERVKQSN 187
++ K + FE + TY+ L+ Y + + L E +++
Sbjct: 156 VNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREG 215
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 247
L + +Y+ +++ + G +E + +E+ R+ V P++ TY+ + T +
Sbjct: 216 LKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREAS 275
Query: 248 KFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLII 307
+ L +M+ G D V Y L + +A + +K + +TY+ ++
Sbjct: 276 EMLKDMTA-RGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKG-EEPGTLTYNVVV- 332
Query: 308 LYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSD 367
GL +D++D + + M +K + + + L ++ E +D WK +
Sbjct: 333 --NGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEK 390
Query: 368 F----DISACNRLLGAFSDVGLTEKANEFH 393
F D+ CN L+ G A H
Sbjct: 391 FHVKPDVFTCNNLIQGLCKEGRVHDAARIH 420
>gi|255583688|ref|XP_002532598.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527686|gb|EEF29795.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 553
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 130/299 (43%), Gaps = 18/299 (6%)
Query: 71 SATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSD--YA 128
+A + +R S G + + + ILK + ++K A E+ E ++ ++ L +
Sbjct: 193 NAEAIFRRMQSSGPKPSAVTYQIILKNFVEGNKFKEAEEVFETLLDEEKSPLKPDQKMFH 252
Query: 129 TRIDLMTKVFGIHSGERYF-----EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERV 183
I + K + F G+P K++ TY +L+ K K +++++
Sbjct: 253 MMIYMHRKAGNYEKARQIFALMTQRGVP---KSTVTYNSLMSFETNYKEVSK---IYDQM 306
Query: 184 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 243
++S L + + Y ++ Y + ++ V EE+ V P YN+ + + A + +
Sbjct: 307 QRSGLQPDVISYALLINAYGKARREDEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 366
Query: 244 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 303
+Q + M D + D Y +++ Y+ AS + AE + ++ + +TY
Sbjct: 367 EQARTVFKSMRRDR-YTPDLCSYTTMLSAYVNASDMAGAE-NFFNRLKQDGLEPNVVTYG 424
Query: 304 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ 362
LI YA N DK+ + ++ +++ K + I+ +Y G K+ G + +K+
Sbjct: 425 ALIKGYAKTNNLDKMMEKYEEMQLRGVKANQTIFTTIMDAY---GKNKDFGSAVIWYKE 480
>gi|449507908|ref|XP_004163164.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Cucumis sativus]
Length = 685
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 19/219 (8%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
+ Y ++L T +A EL +V + +S + +MYN +++ + QV + + E+
Sbjct: 442 DAYISMLESLCRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEK 501
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
+K+ PDIFTYN+ ISS + + + +E+ S D + Y +L+N
Sbjct: 502 MKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELE-SSDCKPDIISYNSLINCLGKNG 560
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL--RMTKQKMTSR 335
+ A L +K + +TY LI + G DK+ ++ +SL RM Q
Sbjct: 561 DVDEAHMRFLEMQDKGLNP-DVVTYSTLIECF---GKTDKV-EMARSLFDRMITQGCCPN 615
Query: 336 NYICILSSYLMLGHLKEVG---EIIDQW----KQSATSD 367
I++ ++L L+ G E +D + +Q T D
Sbjct: 616 ----IVTYNILLDCLERAGRTAETVDLYAKLREQGLTPD 650
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 107/256 (41%), Gaps = 28/256 (10%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT ++ + E++ LFE + + N + YN M+ G V+K L+ +
Sbjct: 306 TYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMIQALSKSGMVDKAILLFCNM 365
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ N P+ FTY++ ++ A + ++ + L+ + K++N +IY ++
Sbjct: 366 IKNNCRPNEFTYSIILNVLVAEGQLGRLDEVLEVSN----------KFIN-KSIY---AY 411
Query: 279 LVNAESSTLVEAE-KSITQRQWITY-----DFLIILYAGLGNKDKIDQIWKSLRMTKQKM 332
LV S +E + W + D I + L K + + L +K
Sbjct: 412 LVRTLSKLGHSSEAHRLFCNMWSFHDGGDRDAYISMLESLCRGGKTVEAIELLSKVHEKG 471
Query: 333 TSRN---YICILSSYLMLGHLKEVGEIIDQW-KQSATSDF-DISACNRLLGAFSDVGLTE 387
S + Y +LS+ LG LK+V + D + K F DI N L+ + VG +
Sbjct: 472 ISTDTMMYNTVLST---LGKLKQVSHLHDLYEKMKQDGPFPDIFTYNILISSLGRVGKVK 528
Query: 388 KANEFHMLLLQKNCAP 403
+A E L +C P
Sbjct: 529 EAVEVFEELESSDCKP 544
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/233 (18%), Positives = 98/233 (42%), Gaps = 2/233 (0%)
Query: 175 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 234
+A E E ++ L N + Y+ +M Y +G E ++E ++RK + P++ TY L +
Sbjct: 236 QAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLV 295
Query: 235 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 294
+++ ++ + EM D V Y ++N Y + +A + E +
Sbjct: 296 KGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDA-TRVRNEMRDAG 354
Query: 295 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 354
Y+ +I LG +++ ++ + + + +Y ++ Y G +++
Sbjct: 355 IHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAF 414
Query: 355 EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
E+ ++ + ++ N LL F + + A L+L++ AP S
Sbjct: 415 EMCRMMVRNGLAATTLTY-NTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEIS 466
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 99/232 (42%), Gaps = 4/232 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
Y A++ Y G WTE A + E +++ LS N + Y ++ Y G++E+ VV+E+
Sbjct: 255 AYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEM 314
Query: 219 KRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
K ++V D Y + I+ +D + +EM D+G + Y ++N
Sbjct: 315 KETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMR-DAGIHVNLFVYNTMINGLCKLG 373
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
+ + L E E + +Y+ LI Y G+ K ++ + + T+ Y
Sbjct: 374 RMEEVQ-KVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTY 432
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
+L + L + + + + + +IS C+ LL G TE+A
Sbjct: 433 NTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEIS-CSTLLDGLFKAGKTEQA 483
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 101/232 (43%), Gaps = 3/232 (1%)
Query: 174 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 233
+K + + + N +M+N ++ G++ + E ++ K +PD FTY+
Sbjct: 682 DKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSL 741
Query: 234 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 293
I CAA+ +ID+ D M +G + + + Y +L+ + L A + K
Sbjct: 742 IHGCAASGSIDEAFSLRDVM-LSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKG 800
Query: 294 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 353
I+ ITY+ LI Y G + ++ + + + T Y ++ G+++E
Sbjct: 801 ISP-NGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEA 859
Query: 354 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 405
+++DQ ++ I+ C L+ + G E+ ++ + + + PTN
Sbjct: 860 IKLLDQMIENNVDPNYITYCT-LIHGYIKSGNMEEISKLYDEMHIRGLLPTN 910
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/121 (19%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +L++ + +A LF +++ +S N + YN ++ Y G+ + + +++
Sbjct: 772 TYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKM 831
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + P + TY++ I +++ K LD+M ++ +++ Y L++ YI + +
Sbjct: 832 VEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQM-IENNVDPNYITYCTLIHGYIKSGN 890
Query: 279 L 279
+
Sbjct: 891 M 891
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 75/169 (44%), Gaps = 2/169 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY++L+H A + ++A L + + + L+ N + YN ++ G++ + + ++
Sbjct: 737 TYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKL 796
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ K + P+ TYN I + K +M + G + Y L+ T +
Sbjct: 797 QSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKM-VEEGIQPTVITYSILIYGLCTQGY 855
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 327
+ A L + ++ +ITY LI Y GN ++I +++ + +
Sbjct: 856 MEEA-IKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHI 903
>gi|222635128|gb|EEE65260.1| hypothetical protein OsJ_20463 [Oryza sativa Japonica Group]
Length = 1443
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 79/186 (42%), Gaps = 2/186 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY A++ ++ ++AE +F+ + + +A+ YN ++ + G VE+V V EE+
Sbjct: 330 TYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEEL 389
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ D TYN I +D DEM G + D V Y LV+
Sbjct: 390 VKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRA-IGCTPDAVTYTVLVDSLGKMDR 448
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ A L E + + +T+ LI YA G +D ++ + + + K Y+
Sbjct: 449 ISEA-GKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYL 507
Query: 339 CILSSY 344
+L +
Sbjct: 508 VMLDVF 513
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 80/184 (43%), Gaps = 2/184 (1%)
Query: 176 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
A EL V+Q+ L +A+ YN +++ ++ V EE+ PD++TYN +S
Sbjct: 277 ALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVS 336
Query: 236 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 295
+ + E+ + G D V Y +L+ + + E E K+
Sbjct: 337 VHGRCGKAQEAELMFKEL-VEKGFQPDAVTYNSLLYAFAKEGDVERVE-RVCEELVKAGF 394
Query: 296 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 355
++ ITY+ +I +Y +G D ++ +R + Y ++ S + + E G+
Sbjct: 395 RKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGK 454
Query: 356 IIDQ 359
++++
Sbjct: 455 VLEE 458
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 78/168 (46%), Gaps = 7/168 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+ + + A +FE + S + YN M++++ G+ ++ L+ +E+
Sbjct: 295 TYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKEL 354
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K PD TYN + + A ++++V++ +E+ +G D + Y ++++Y
Sbjct: 355 VEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEEL-VKAGFRKDGITYNTMIHMYGKMGR 413
Query: 279 LVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSL 325
L A L + ++I +TY +L LG D+I + K L
Sbjct: 414 LDLALG--LYDEMRAIGCTPDAVTY---TVLVDSLGKMDRISEAGKVL 456
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 48/96 (50%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
E+Y LL AK E+A+ LFE ++ N +Y+ MM +Y + K ++
Sbjct: 993 ESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSA 1052
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
+K + P I T ++ ++S + + D+ +K L+ +
Sbjct: 1053 MKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSL 1088
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 36/183 (19%), Positives = 83/183 (45%), Gaps = 2/183 (1%)
Query: 163 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 222
LL +Y G ++ E++ + ++ L + YN ++ +Y + E+ ++ E+ ++
Sbjct: 928 LLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRG 987
Query: 223 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 282
+ P + +Y + +++ +Q +EM G + Y ++ IY A + A
Sbjct: 988 LTPKLESYKILLAASGKAKLWEQADLLFEEMRT-KGYRLNRSIYHMMMKIYRNARNHSKA 1046
Query: 283 ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILS 342
E E I + T L+ Y G+ D+ +++ SL+ + ++++ Y +L
Sbjct: 1047 EHLLSAMKEDGI-EPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLD 1105
Query: 343 SYL 345
+YL
Sbjct: 1106 AYL 1108
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/168 (19%), Positives = 79/168 (47%), Gaps = 7/168 (4%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
K TY ++H+Y + A L++ ++ + +A+ Y ++ + ++ + V
Sbjct: 396 KDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKV 455
Query: 215 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274
+EE+ + P + T++ I + A + D ++ D M +SG D + Y+ +++++
Sbjct: 456 LEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRM-VESGVKPDRLAYLVMLDVFA 514
Query: 275 TASHLVNAESSTLVEAEKSITQRQWITYDFLI-ILYAGLGNKDKIDQI 321
+ E+ L+ +++ + + D L +L A L ++ D+I
Sbjct: 515 RSD-----ETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEI 557
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 125/299 (41%), Gaps = 22/299 (7%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
A +++ + + G Q + +L+ L + + K AL + V K F L Y T I
Sbjct: 107 AFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDH-VIRKRFHLDQVSYGTLI 165
Query: 132 DLMTKVFGIHSGE--------RYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERV 183
+ + K SGE R EGL L YTA++ + K A +L+ +
Sbjct: 166 NGLCK-----SGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEM 220
Query: 184 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 243
+ N + +N ++ + VGQ+++ ++ E+ NV P+++T+N+ I +
Sbjct: 221 IVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEV 280
Query: 244 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 303
+ L M G + V Y +L++ Y + A+ + + +T +Y
Sbjct: 281 KKATSVLSVM-IKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVH-SYS 338
Query: 304 FLIILYAGLGNKDKIDQ---IWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 359
+I GL +D+ ++K + + + Y ++ G + +V ++ID+
Sbjct: 339 VMI---NGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDE 394
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 87/206 (42%), Gaps = 2/206 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT+L+ Y K KA+ +F + ++ N Y+ M+ V++ + +E+
Sbjct: 301 TYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEM 360
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
KN+ P+ TY+ I + I V +DE++ + G + + Y +L+N + +H
Sbjct: 361 HLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEIN-NRGQPANIITYNSLLN-GLCKNH 418
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
V+ + L + + Q TY L+ G +I++ L + R Y
Sbjct: 419 QVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYT 478
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSA 364
+++ G E ++ Q + +
Sbjct: 479 VMINGLCKEGFFDEALSLLSQMEDNG 504
>gi|297737955|emb|CBI27156.3| unnamed protein product [Vitis vinifera]
Length = 625
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 114/260 (43%), Gaps = 9/260 (3%)
Query: 149 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 208
G P SA Y + L G T+KA E+FER+K+ + Y ++ LY +
Sbjct: 271 GFPPSAVVYNAY--IDGLMKGGD-TQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKS 327
Query: 209 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268
V E++ + P+I T+ +++ A ++ ++ +++ ++G D Y
Sbjct: 328 YMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQ-EAGLEPDVYAYNA 386
Query: 269 LVNIYITASHLVNA-ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 327
L+ Y A A E +L++ R +Y+ ++ Y G + +++ ++
Sbjct: 387 LMEAYSRAGFPYGAAEIFSLMQHMGCEPDRA--SYNIMVDAYGRAGLHEDAQAVFEVMKR 444
Query: 328 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 387
T ++++ +LS+Y G + + EI++Q +S D N +L + +G E
Sbjct: 445 LGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKP-DTFVLNSMLNLYGRLGQFE 503
Query: 388 KANEFHMLLLQKNCAPTNAS 407
K E + ++K P + S
Sbjct: 504 KMEEV-LTAMEKGPYPADIS 522
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 89/202 (44%), Gaps = 37/202 (18%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNL-----SFNALM------------------- 194
T+TAL++ +A EKAEE+FE+++++ L ++NALM
Sbjct: 348 TFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLM 407
Query: 195 -----------YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 243
YN M+ Y G E V E +KR + P + ++ L +S+ + +
Sbjct: 408 QHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKV 467
Query: 244 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 303
+ ++ +++M SG D +++N+Y E L EK TY+
Sbjct: 468 AKCEEIVNQMH-KSGIKPDTFVLNSMLNLYGRLGQFEKME-EVLTAMEKGPYPADISTYN 525
Query: 304 FLIILYAGLGNKDKIDQIWKSL 325
LI +Y G +++++++SL
Sbjct: 526 ILINIYGRAGFFARMEELFRSL 547
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 85/248 (34%), Gaps = 38/248 (15%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y L+ Y +KAE + + ++ Y ++ Y + G +EK V E++
Sbjct: 209 YNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMR 268
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
+ P YN +I + + + + M D
Sbjct: 269 KYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDR---------------------- 306
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 339
Q TY LI LY +++ +R K K +
Sbjct: 307 ---------------CQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTA 351
Query: 340 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 399
+++++ G ++ EI +Q Q A + D+ A N L+ A+S G A E L+
Sbjct: 352 LVNAFAREGLCEKAEEIFEQL-QEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHM 410
Query: 400 NCAPTNAS 407
C P AS
Sbjct: 411 GCEPDRAS 418
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
T +++ LL Y+ A K EE+ ++ +S + + + N M+ LY +GQ EK+ V+
Sbjct: 450 TMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVL 509
Query: 216 EEIKRKNVVPDIFTYNLWIS 235
+++ DI TYN+ I+
Sbjct: 510 TAMEKGPYPADISTYNILIN 529
>gi|225423724|ref|XP_002276864.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Vitis vinifera]
Length = 587
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 114/260 (43%), Gaps = 9/260 (3%)
Query: 149 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 208
G P SA Y + L G T+KA E+FER+K+ + Y ++ LY +
Sbjct: 233 GFPPSAVVYNAY--IDGLMKGGD-TQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKS 289
Query: 209 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268
V E++ + P+I T+ +++ A ++ ++ +++ ++G D Y
Sbjct: 290 YMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQ-EAGLEPDVYAYNA 348
Query: 269 LVNIYITASHLVNA-ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 327
L+ Y A A E +L++ R +Y+ ++ Y G + +++ ++
Sbjct: 349 LMEAYSRAGFPYGAAEIFSLMQHMGCEPDRA--SYNIMVDAYGRAGLHEDAQAVFEVMKR 406
Query: 328 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 387
T ++++ +LS+Y G + + EI++Q +S D N +L + +G E
Sbjct: 407 LGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKP-DTFVLNSMLNLYGRLGQFE 465
Query: 388 KANEFHMLLLQKNCAPTNAS 407
K E + ++K P + S
Sbjct: 466 KMEEV-LTAMEKGPYPADIS 484
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 89/202 (44%), Gaps = 37/202 (18%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNL-----SFNALM------------------- 194
T+TAL++ +A EKAEE+FE+++++ L ++NALM
Sbjct: 310 TFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLM 369
Query: 195 -----------YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 243
YN M+ Y G E V E +KR + P + ++ L +S+ + +
Sbjct: 370 QHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKV 429
Query: 244 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 303
+ ++ +++M SG D +++N+Y E L EK TY+
Sbjct: 430 AKCEEIVNQMH-KSGIKPDTFVLNSMLNLYGRLGQFEKME-EVLTAMEKGPYPADISTYN 487
Query: 304 FLIILYAGLGNKDKIDQIWKSL 325
LI +Y G +++++++SL
Sbjct: 488 ILINIYGRAGFFARMEELFRSL 509
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 85/248 (34%), Gaps = 38/248 (15%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y L+ Y +KAE + + ++ Y ++ Y + G +EK V E++
Sbjct: 171 YNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMR 230
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
+ P YN +I + + + + M D
Sbjct: 231 KYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDR---------------------- 268
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 339
Q TY LI LY +++ +R K K +
Sbjct: 269 ---------------CQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTA 313
Query: 340 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 399
+++++ G ++ EI +Q Q A + D+ A N L+ A+S G A E L+
Sbjct: 314 LVNAFAREGLCEKAEEIFEQL-QEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHM 372
Query: 400 NCAPTNAS 407
C P AS
Sbjct: 373 GCEPDRAS 380
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
T +++ LL Y+ A K EE+ ++ +S + + + N M+ LY +GQ EK+ V+
Sbjct: 412 TMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVL 471
Query: 216 EEIKRKNVVPDIFTYNLWIS 235
+++ DI TYN+ I+
Sbjct: 472 TAMEKGPYPADISTYNILIN 491
>gi|90399139|emb|CAJ86163.1| H0913C04.4 [Oryza sativa Indica Group]
gi|125550286|gb|EAY96108.1| hypothetical protein OsI_17985 [Oryza sativa Indica Group]
Length = 900
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 98/220 (44%), Gaps = 16/220 (7%)
Query: 152 LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 211
LS+ Y+ ++H + + E+AEEL +++ + +Y+ MM Y + K
Sbjct: 363 LSSLNGIIYSNIIHAHCQSGNMERAEELVCEMEEDGIDAPIDVYHSMMHGYTIIQNENKC 422
Query: 212 ALVVEEIKRKNVVPDIFTY----NLW--ISSCAATLNIDQVKKFLDEM-SCDSGGSDDWV 264
+V E +K P I +Y NL+ I A L+I + EM SC G +
Sbjct: 423 LVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISK------EMESC--GIKHNNK 474
Query: 265 KYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS 324
Y L+N +I NA + E +S Q Y+ LI + +GN D+ I +
Sbjct: 475 TYSMLINGFIHLHDFANA-FAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEK 533
Query: 325 LRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
++ + + ++R + I+ Y + G +K + +D ++S
Sbjct: 534 MQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSG 573
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 87/188 (46%), Gaps = 4/188 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT ++ YA + KA E F ++K+S L + +Y ++ G+++ V E+
Sbjct: 615 TYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREM 674
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + + F YN+ I A ++ + + + +M D G + Y + +N A
Sbjct: 675 SFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKED-GVPPNIHTYTSYINACCKAGD 733
Query: 279 LVNAESSTLVEAEKSITQRQWI-TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
+ AE ++E + + + TY LI +A + D+ + ++ +++ K +Y
Sbjct: 734 MQRAEK--VIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASY 791
Query: 338 ICILSSYL 345
C+++S L
Sbjct: 792 HCLVTSLL 799
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 91/204 (44%), Gaps = 4/204 (1%)
Query: 147 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 206
FE +P ++ + ++ YA A FE ++ + NA ++ ++ Y
Sbjct: 255 FERIPKPSR--REFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAR 312
Query: 207 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 266
+ VEE+K + + I TY++ IS A +N Q L + + S + + Y
Sbjct: 313 DMRGALSCVEEMKSEGLELTIVTYSILISG-FAKINDSQSADNLFKEAKTKLSSLNGIIY 371
Query: 267 VNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 326
N+++ + + ++ AE + E E+ Y ++ Y + N++K +++ L+
Sbjct: 372 SNIIHAHCQSGNMERAE-ELVCEMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLK 430
Query: 327 MTKQKMTSRNYICILSSYLMLGHL 350
K + +Y C+L+ Y+ +G +
Sbjct: 431 ECGFKPSIISYGCLLNLYVKIGKV 454
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 95/234 (40%), Gaps = 9/234 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y LL+LY KA + + ++ + N Y+ ++ ++ + + EE+
Sbjct: 440 SYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEM 499
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
R + PD YNL I + N+D+ L++M + + + ++ Y A
Sbjct: 500 LRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRA-FRPIIEGYAVAGD 558
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL-RMTKQKMTS--R 335
+ +A TL +S +TY+ LI GL K K+ + L +M+ +T
Sbjct: 559 MKSA-LDTLDLMRRSGCVPTVMTYNALI---HGLVRKHKVQRAVSVLDKMSIAGITPNEH 614
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
Y I+ Y G + + E + K+S D+ LL A G + A
Sbjct: 615 TYTIIMRGYAASGDIGKAFEYFTKIKESGLK-LDVYIYETLLRACCKSGRMQSA 667
>gi|15983487|gb|AAL11611.1|AF424618_1 AT5g04810/MUK11_13 [Arabidopsis thaliana]
Length = 950
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 100/239 (41%), Gaps = 15/239 (6%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y +++ + E+AE L +++ + +Y+ MM Y V +K +V + +K
Sbjct: 415 YGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLK 474
Query: 220 RKNVVPDIFTY----NLW--ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
P + TY NL+ + + L + +V K + G + Y ++N +
Sbjct: 475 ECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMK-------EEGVKHNLKTYSMMINGF 527
Query: 274 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
+ NA + + K + I Y+ +I + G+GN D+ Q K ++ + + T
Sbjct: 528 VKLKDWANA-FAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPT 586
Query: 334 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
+R ++ I+ Y G ++ E+ D ++ + N L+ + EKA E
Sbjct: 587 TRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVP-TVHTFNGLINGLVEKRQMEKAVEI 644
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 79/187 (42%), Gaps = 2/187 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT ++ YA T KA E F R++ L + Y ++ G+++ V +E+
Sbjct: 659 TYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEM 718
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+N+ + F YN+ I A ++ + + +M G D Y + ++ A
Sbjct: 719 SARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMK-KEGVKPDIHTYTSFISACSKAGD 777
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ N + T+ E E + TY LI +A +K ++ ++ K Y
Sbjct: 778 M-NRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYH 836
Query: 339 CILSSYL 345
C+L+S L
Sbjct: 837 CLLTSLL 843
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 44/99 (44%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
T T+ L++ + EKA E+ + + + +S N Y ++M Y SVG K
Sbjct: 621 TVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYF 680
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 254
++ + + DIFTY + +C + + EMS
Sbjct: 681 TRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMS 719
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L++LY KA E+ +K+ + N Y+ M+ ++ + V E++
Sbjct: 484 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM 543
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
++ + PD+ YN IS+ N+D+ + + EM
Sbjct: 544 VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEM 578
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 106/252 (42%), Gaps = 6/252 (2%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
T TYT ++ A T+ A +L + ++ S N YN ++ ++++ ++
Sbjct: 79 TVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKML 138
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275
EE+ + PD+ TYN +I +D+ +KFL M + D V Y ++N
Sbjct: 139 EEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPV----TPDVVSYTTVINGLCK 194
Query: 276 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
+ L ++ S L + +TY LI + G ++ + S+ +
Sbjct: 195 SGDL-DSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMV 253
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 395
Y +L + LGH+ + +++ + ++ + D+ + N + +KA
Sbjct: 254 AYNSLLGALHRLGHIGKAEDMLVEMERRGFTP-DVVSYNACIDGLCKAERVKKAKAVFDR 312
Query: 396 LLQKNCAPTNAS 407
++++ C P +S
Sbjct: 313 MVERGCTPNASS 324
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 100/250 (40%), Gaps = 16/250 (6%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+ LL + EKA +L R+K+ + +YN +++ Y + + E+
Sbjct: 12 TFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEM 71
Query: 219 KRKNVVPDIFTY-NLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
+ + +P + TY N+ C A D V K LDEM D G S + Y N+ +
Sbjct: 72 VKNHCLPTVVTYTNIVDGLCKAGRTKDAV-KLLDEMR-DKGCSPNIYTY----NVIVEGL 125
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILY----AGLGNKDKIDQIWKSLRMTKQKMT 333
E L EA+K + + Y ++ Y GL D++D+ K L
Sbjct: 126 ----CEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPD 181
Query: 334 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 393
+Y +++ G L ++DQ + D+ + L+ F G E+A
Sbjct: 182 VVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTP-DVVTYSSLIDGFCKGGEVERAMGLL 240
Query: 394 MLLLQKNCAP 403
+L+ C P
Sbjct: 241 DSMLKLGCRP 250
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 104/253 (41%), Gaps = 16/253 (6%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y AL+ Y+ AK +A + + +++ + Y ++ G+ + +++E++
Sbjct: 48 YNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMR 107
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
K P+I+TYN+ + +D+ KK L+EM+ G D V Y + +
Sbjct: 108 DKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAV-RGYFPDVVTYNSFIKGLCKCDR- 165
Query: 280 VNAESSTLVEAEKSITQRQWITYDFL--IILYAGLGNKDKIDQIWKSL-RMTKQKMTSR- 335
V+ + R +T D + + GL +D + L +MT + T
Sbjct: 166 --------VDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDV 217
Query: 336 -NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 394
Y ++ + G ++ ++D + ++ A N LLGA +G KA + +
Sbjct: 218 VTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRP-NMVAYNSLLGALHRLGHIGKAEDMLV 276
Query: 395 LLLQKNCAPTNAS 407
+ ++ P S
Sbjct: 277 EMERRGFTPDVVS 289
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/298 (18%), Positives = 121/298 (40%), Gaps = 4/298 (1%)
Query: 71 SATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATR 130
+A +V+++ + G V ++ K A ++ MV K + Y+
Sbjct: 232 AAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVA-KGMRPNVVTYSAL 290
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNL 188
ID + K + E + T + TY+AL+H A E+AE++ R+ S
Sbjct: 291 IDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGC 350
Query: 189 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 248
+ + ++Y+ ++ + G++ + ++E++++ PD+ TYN I I + +
Sbjct: 351 TPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQV 410
Query: 249 FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIIL 308
L++M D V Y ++N + LV A+ L K+ +TY +I
Sbjct: 411 ILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQ-KLLDRMCKAGCNPDVVTYTTIIDG 469
Query: 309 YAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATS 366
G ++ + + + ++ Y ++S + E ++++ + +
Sbjct: 470 LCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCP 527
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 103/243 (42%), Gaps = 12/243 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYTAL+ +A AK E+A +L E +++ N + YN ++ + V VV+++
Sbjct: 181 TYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKM 240
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
P++ T+N + N+D +K L M G + V Y L++ +
Sbjct: 241 IEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVA-KGMRPNVVTYSALIDGLCKSQK 299
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN-- 336
+ A+ L E + TY LI GL DKI++ + LR + +
Sbjct: 300 FLEAK-EVLEEMKTRGVTPDAFTYSALI---HGLCKADKIEEAEQMLRRMAGSGCTPDVV 355
Query: 337 -YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 395
Y I+ ++ G L E + + + ++ S D+ N ++ +G K E ++
Sbjct: 356 VYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSP-DVVTYNTVIDGLCKLG---KIAEAQVI 411
Query: 396 LLQ 398
L Q
Sbjct: 412 LEQ 414
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 68/141 (48%), Gaps = 3/141 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT ++ E+AE L + +K++ + N + Y +++ +V++ V+EE+
Sbjct: 462 TYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEM 521
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM-SCDSGGSDDWVKYVNLVNIYITAS 277
+ P++ TYN ++ + I + ++ + M + S D Y +VN ++ S
Sbjct: 522 RNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMS-S 580
Query: 278 HLVNAESSTLVEAEKSITQRQ 298
LV E+ L+E KS T Q
Sbjct: 581 DLVQ-EAEQLLEQMKSTTSSQ 600
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 5/157 (3%)
Query: 150 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 209
+P + T+ ++ +LL + K +A +LF ++ + YN +++ + + G +
Sbjct: 70 IPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLH 129
Query: 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
++EE+K PD FT+ I++ A ++D L M CD + V Y L
Sbjct: 130 AALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDP----NVVTYTAL 185
Query: 270 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI 306
+ + A L A L E + +TY+ L+
Sbjct: 186 IAAFARAKKLEEA-MKLLEEMRERGCPPNLVTYNVLV 221
>gi|242091740|ref|XP_002436360.1| hypothetical protein SORBIDRAFT_10g001070 [Sorghum bicolor]
gi|241914583|gb|EER87727.1| hypothetical protein SORBIDRAFT_10g001070 [Sorghum bicolor]
Length = 999
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 116/264 (43%), Gaps = 52/264 (19%)
Query: 134 MTKVFGIHSGERYFEGLPLSAKTSE---TYTALLHLYAGAKWTEKAEELFERVKQSNLSF 190
+TK +HS ++ + +S+ TS+ T+ ++ ++ +KA E+F ++ L
Sbjct: 722 LTKHGKLHSAISIYDRM-ISSGTSQSMQTFNLMISVFGKGGKLDKAVEMFAAAQELGLPI 780
Query: 191 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 250
+ MY M++LY G+ ++ +L+ + +K + P ++N I++ A + + K
Sbjct: 781 DEKMYTNMLSLYGKAGRHQEASLMFKRMKEDGIRPGKISFNSMINAYATSGLCSEAKSTF 840
Query: 251 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYA 310
EM D G + D Y+ L+ Y E+ +EAE++I
Sbjct: 841 HEMQ-DCGHAPDSFSYLALIRAY--------TEAKLYMEAEEAI---------------- 875
Query: 311 GLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE--VGE---IIDQWKQSAT 365
RM T+ + C S+L+ LKE +GE I +Q K+++
Sbjct: 876 ---------------RMMLNSSTTPS--CPHFSHLIFAFLKEGQIGEAQRIYNQMKEASV 918
Query: 366 SDFDISACNRLLGAFSDVGLTEKA 389
+ D++ C ++ + + GL ++
Sbjct: 919 AP-DLACCRTMMRVYMEHGLMDEG 941
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 96/231 (41%), Gaps = 4/231 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT ++ + EKA ++F ++Q Y+ +++ G+ E+ + EE+
Sbjct: 281 TYTVVISSFVKEDLLEKAMDVFGEMRQCRFVPEEATYSLLISASSRHGKGEQALRLFEEM 340
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K + +VP +T ++ + + L EM +S D V Y L+ IY
Sbjct: 341 KAQGIVPSNYTCASLLALYYKNEDYSKALSLLSEME-NSKVIPDEVIYGILIRIYGKLGL 399
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
AE T + EK+ TY + ++ G+ D+ ++ +S+ M K + +Y
Sbjct: 400 YEEAE-QTFEKIEKAGLLSDEQTYVAMAQVHLNAGDYDRALEVLESMMMRNVKPSHFSYS 458
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
IL Y+ + + Q D+ CN LL + +G EKA
Sbjct: 459 AILRCYVAKEDIVAAEDTFRALSQHGLP--DVFCCNDLLRLYMRLGHLEKA 507
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 60/128 (46%), Gaps = 2/128 (1%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y L+ +Y E+AE+ FE+++++ L + Y M ++++ G ++ V+E +
Sbjct: 387 YGILIRIYGKLGLYEEAEQTFEKIEKAGLLSDEQTYVAMAQVHLNAGDYDRALEVLESMM 446
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
+NV P F+Y+ + A +I + +S G D +L+ +Y+ HL
Sbjct: 447 MRNVKPSHFSYSAILRCYVAKEDIVAAEDTFRALS--QHGLPDVFCCNDLLRLYMRLGHL 504
Query: 280 VNAESSTL 287
A + L
Sbjct: 505 EKARALVL 512
Score = 44.3 bits (103), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 76/181 (41%), Gaps = 4/181 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
YT LL LY + AEE F + Q +A+ ++ +Y G+ + + L +
Sbjct: 176 AYTILLRLYGKVGKIKLAEETFLEMLQVGCEPDAVACGTLLCMYARWGRHKDMMLFYSAV 235
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+R+++VP + YN ISS +V +M ++G + Y +++ ++
Sbjct: 236 RRRDLVPPVSVYNYMISSLQKQKLHGKVIHVWKQMR-EAGALPNQFTYTVVISSFVKED- 293
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L+ E + + TY LI + G ++ ++++ M Q + NY
Sbjct: 294 LLEKAMDVFGEMRQCRFVPEEATYSLLISASSRHGKGEQALRLFEE--MKAQGIVPSNYT 351
Query: 339 C 339
C
Sbjct: 352 C 352
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 105/265 (39%), Gaps = 23/265 (8%)
Query: 139 GIHSGERYFEGLPLSAKTSE--------TYTALLHLYAGAKWTEKAEELFERVKQSNLSF 190
G G+R ++ L + + E Y ++ +K + A +L R++ +
Sbjct: 160 GFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRP 219
Query: 191 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 250
+A+ YN +++ + G+ + +V + ++ + PD+FT+N I +C I + ++
Sbjct: 220 DAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELY 279
Query: 251 DEM---SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLII 307
+EM S D D V Y L+ S L AE K +TY LI
Sbjct: 280 EEMIRRSLDP----DIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFP-DVVTYSILI- 333
Query: 308 LYAGLGNKDKIDQIWKSLRMTKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQWKQSA 364
G K++ K Q+ RN Y ++ Y G L V E I +W
Sbjct: 334 --NGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKL-NVAEEIFKWMVFC 390
Query: 365 TSDFDISACNRLLGAFSDVGLTEKA 389
+I N LL D G EKA
Sbjct: 391 GVPPNIITYNVLLHGLCDNGKIEKA 415
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 43/81 (53%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
+ + TYT L+ Y A AEE+F+ + + N + YN ++ G++EK +
Sbjct: 358 VRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALV 417
Query: 214 VVEEIKRKNVVPDIFTYNLWI 234
++ ++++ + DI TYN+ I
Sbjct: 418 ILADMQKSGMDADIVTYNIII 438
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 82/198 (41%), Gaps = 9/198 (4%)
Query: 129 TRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNL 188
+R+D ++FG + F + TY+ L++ Y +K E +LF + Q +
Sbjct: 305 SRLDEAEQMFGFMVSKGCFPDV-------VTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357
Query: 189 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 248
N + Y ++ Y G++ + + + V P+I TYN+ + I++
Sbjct: 358 VRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALV 417
Query: 249 FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIIL 308
L +M SG D V Y ++ A + +A K +T W ++ L
Sbjct: 418 ILADMQ-KSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGL 476
Query: 309 YAGLGNKDKIDQIWKSLR 326
Y G + + D +++ ++
Sbjct: 477 YKK-GLRGEADALFRKMK 493
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/257 (18%), Positives = 114/257 (44%), Gaps = 8/257 (3%)
Query: 148 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 207
+G+P TY +++H A+ +KA+ + ++ + + + + YN ++ Y ++GQ
Sbjct: 240 QGVP---PNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQ 296
Query: 208 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 267
++ + +E+ + V+P+ T + +++ I++ ++F D M G + + Y
Sbjct: 297 WKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSM-LAKGHKLNIISYS 355
Query: 268 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 327
L++ Y TA LV+ + + I Q + ++ L+ YA G + I++ ++
Sbjct: 356 TLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHV-FNILVNGYAKCGMVREAMFIFEDMQK 414
Query: 328 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW-KQSATSDFDISACNRLLGAFSDVGLT 386
Y+ ++ ++ +G + + + + + +F + C L+ F G
Sbjct: 415 RGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQC--LIQGFCTHGDL 472
Query: 387 EKANEFHMLLLQKNCAP 403
KA E + K P
Sbjct: 473 VKAEELVYEIRNKGLGP 489
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 137/341 (40%), Gaps = 19/341 (5%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDS-DYATR 130
A N+ + + EG + TV +LK L + + AL+I W + K V D Y+T
Sbjct: 387 AFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQI--WHLMMKRGVAPDEVGYSTL 444
Query: 131 IDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQSNL 188
+D + K+ ++ + K+ T+ ++ +AEE+F+++K
Sbjct: 445 LDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGC 504
Query: 189 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 248
S + + Y ++ Y V + V ++R+ + P I YN IS + + +V
Sbjct: 505 SPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTD 564
Query: 249 FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIIL 308
L EM G + + V Y L++ + L A SS E ++ I +
Sbjct: 565 LLTEMGI-RGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICS----TM 619
Query: 309 YAGLGNKDKIDQIWKSLRMTKQKMTSRNYI----CILSSYLMLGHLKEVGEIIDQWKQSA 364
+GL +ID+ + QKM + C L S + ++++ + +D+ ++
Sbjct: 620 VSGLYRLGRIDEA----NLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTF 675
Query: 365 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 405
+I N + G + A F +L K P N
Sbjct: 676 LLPNNIVY-NIAIAGLCKTGKVDDARRFFSMLSLKGFVPDN 715
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/258 (19%), Positives = 112/258 (43%), Gaps = 10/258 (3%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
A + + +L +Y T+ A +F+ + + + N ++ + G+
Sbjct: 119 AFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHY 178
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
V +++ R +VPD+F ++ +++ +D+ F+ +M + G + V Y +L+N Y
Sbjct: 179 VYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKME-NLGVEPNIVTYHSLINGY 237
Query: 274 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
++ + A+ +EK ++ R +TY LI G + K+D+ K LR +++
Sbjct: 238 VSLGDVEAAKGVLKFMSEKGVS-RNVVTYTLLI---KGYCKQCKMDEAEKVLRGMQEEAA 293
Query: 334 ----SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
R Y ++ Y G + + ++D+ + ++ CN L+ + G +A
Sbjct: 294 LVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKT-NLFICNSLINGYCKRGEIHEA 352
Query: 390 NEFHMLLLQKNCAPTNAS 407
++ N P + S
Sbjct: 353 EGVITRMVDWNLKPDSYS 370
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 72/160 (45%), Gaps = 4/160 (2%)
Query: 98 LRKSQRYKHALEISEWM-VTHKEFVLSDSD-YATRIDLMTKVFGIHSGERYFEGLPLSAK 155
L+ RY +I++ + + K F+L ++ Y I + K + R+F L L
Sbjct: 652 LKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGF 711
Query: 156 TSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
+ TY L+H Y+ A ++A L + + + L N + YN ++ V++
Sbjct: 712 VPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQR 771
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
+ ++ +K + P++ TYN I N+D K D+M
Sbjct: 772 LFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKM 811
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 94/231 (40%), Gaps = 2/231 (0%)
Query: 173 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 232
++A ++++ + N + Y+ ++ Y+S+G VE V++ + K V ++ TY L
Sbjct: 208 VDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTL 267
Query: 233 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 292
I +D+ +K L M ++ D Y L++ Y + +A L E +
Sbjct: 268 LIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDA-VRLLDEMLR 326
Query: 293 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 352
+ + LI Y G + + + + K S +Y +L Y GH E
Sbjct: 327 LGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSE 386
Query: 353 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
+ D+ Q + N LL VG + A + L++++ AP
Sbjct: 387 AFNLCDKMLQEGIEP-TVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAP 436
>gi|242086476|ref|XP_002443663.1| hypothetical protein SORBIDRAFT_08g023090 [Sorghum bicolor]
gi|241944356|gb|EES17501.1| hypothetical protein SORBIDRAFT_08g023090 [Sorghum bicolor]
Length = 853
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 128/324 (39%), Gaps = 11/324 (3%)
Query: 86 ATVSELRHILKELRKSQRYKHALEISEW--MVTHKEFVLSDSDYATRIDLMTKVFGIHS- 142
A S LR LK LR ++Y H L+ +W M H L A + + + K+ H+
Sbjct: 284 APQSSLRS-LKSLRSVEQYYHTLQQMKWGPMTEHVLDNLHCKIDAFQANQVLKLLHDHTV 342
Query: 143 GERYFEGL---PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMM 199
+F+ L P TYT ++ + A+ ++L + + +++ + YN ++
Sbjct: 343 ALGFFQWLKRQPGFKHDGHTYTTMIGILGQARQFGVLKKLLDEMSRAHCKPTVVTYNRII 402
Query: 200 TLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG 259
Y +++ V EE++ PD TY I A +D M + G
Sbjct: 403 HAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQ-EVGL 461
Query: 260 SDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID 319
S D Y +VN L A E T +TY+ +I L A N + +
Sbjct: 462 SPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIENGCTP-NLVTYNIMIALQAKARNYENVV 520
Query: 320 QIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGA 379
+++K +++ + Y ++ GHL E + + ++ D + L+
Sbjct: 521 KLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRRDWAPDEPVYGL--LVDL 578
Query: 380 FSDVGLTEKANEFHMLLLQKNCAP 403
+ G +KA ++ +LQ P
Sbjct: 579 WGKAGNVDKALGWYQAMLQDGLQP 602
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 55/288 (19%), Positives = 122/288 (42%), Gaps = 30/288 (10%)
Query: 107 ALEISEWMVTHKEFVLSDSDYATRIDLMTKV--FGIHSGERYFEGLPLS--AKTSETYTA 162
AL +W+ F Y T I ++ + FG+ ++ + + + T TY
Sbjct: 343 ALGFFQWLKRQPGFKHDGHTYTTMIGILGQARQFGVL--KKLLDEMSRAHCKPTVVTYNR 400
Query: 163 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 222
++H Y A + ++A ++FE ++++ + + Y ++ ++ G ++ + ++
Sbjct: 401 IIHAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQEVG 460
Query: 223 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 282
+ PD FTY+ ++ + K EM ++G + + V Y ++ + A + N
Sbjct: 461 LSPDTFTYSAMVNCLGKGGQLAAAYKLFCEM-IENGCTPNLVTYNIMIALQAKARNYEN- 518
Query: 283 ESSTLVEAEKSIT----QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+V+ K + + ITY ++ + G+ D+ + ++ +R R++
Sbjct: 519 ----VVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMR--------RDWA 566
Query: 339 CILSSYLMLGHLKEVGEIIDQ---WKQSATSD---FDISACNRLLGAF 380
Y +L L +D+ W Q+ D ++ CN LL AF
Sbjct: 567 PDEPVYGLLVDLWGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAF 614
>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
Length = 825
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 105/253 (41%), Gaps = 10/253 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y ALLH YA A + LF + + + ++N ++ Y +G ++K L+ E++
Sbjct: 366 SYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDM 425
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
++ V PDI T++ IS+ +D + + M D+G D Y L+
Sbjct: 426 TKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHM-IDTGVPPDTAVYSCLIQGQCNRRD 484
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG----NKDKIDQIWKSLRMTKQKMTS 334
LV A+ K I + +I G KD +D I T Q+
Sbjct: 485 LVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIH----TGQRPNL 540
Query: 335 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 394
+ ++ Y ++G++KE ++D +S + DI N L+ + G + A
Sbjct: 541 ITFNSLVDGYCLVGNMKEAVGLLDSM-ESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFR 599
Query: 395 LLLQKNCAPTNAS 407
+L K T+ S
Sbjct: 600 DMLHKRVTLTSVS 612
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 103/227 (45%), Gaps = 15/227 (6%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY++L++ K +KAE + ++ + + N + YN ++ Y + G ++ V +E+
Sbjct: 261 TYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEM 320
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+VPD+ N ++++ I + + D M G D + Y L++ Y TA
Sbjct: 321 SSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVL-KGPKPDVISYGALLHGYATAGC 379
Query: 279 LVNAESS-TLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR-- 335
+ ++ ++ E + R ++ LI YA LG DK +++ MTKQ +
Sbjct: 380 IAGMDNLFNVMVCEGVVPDRH--VFNTLINAYARLGMMDKSLLMFED--MTKQGVNPDII 435
Query: 336 NYICILSSYLMLGHLKEVGE----IIDQWKQSATSDFDI---SACNR 375
+ ++S++ LG L + E +ID T+ + CNR
Sbjct: 436 TFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNR 482
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 66/127 (51%), Gaps = 1/127 (0%)
Query: 151 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 210
P +A T TY L++ Y A+ + +F R+ ++ L + YN ++ + G+V+K
Sbjct: 183 PEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDK 242
Query: 211 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 270
+ +++ + ++P++ TY+ I+ T +D+ ++ L +M +G + + Y L+
Sbjct: 243 AHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQM-VGAGVRPNNMTYNCLI 301
Query: 271 NIYITAS 277
+ Y T+
Sbjct: 302 HGYSTSG 308
>gi|302779738|ref|XP_002971644.1| hypothetical protein SELMODRAFT_412145 [Selaginella moellendorffii]
gi|300160776|gb|EFJ27393.1| hypothetical protein SELMODRAFT_412145 [Selaginella moellendorffii]
Length = 1056
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/336 (18%), Positives = 139/336 (41%), Gaps = 40/336 (11%)
Query: 56 DDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMV 115
DD +++ + K +++W+ GN + L I L K +RY +++ E +
Sbjct: 111 DDKITKLLEMIESKPDTFEAVKKWMRRGNCLSSDVLSTIYFWLMKRKRYTEIMKLLEGIR 170
Query: 116 THKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEK 175
+ +D I ++++ G+ ER+++ LP +T L A K
Sbjct: 171 CERLVKFTDMHCVWAIGVISRRRGMAKAERFYDSLPEKLRTDRVTVGLFLSVAKENGLAK 230
Query: 176 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
AE+ E+++ + + MM LY++ + KV + E ++ + P + TY L +
Sbjct: 231 AEQWLEKIQVHTTD----ILDVMMVLYLNRDKHHKVVEMFERMRGLGLQPSVRTY-LMLL 285
Query: 236 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 295
C D+ L+ + ++ G A ++ E L
Sbjct: 286 KCK-----DRGAGGLNAIEGEALG----------------AVQTMDVEDPPLR------- 317
Query: 296 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 355
T + + +Y +G +D I+++W+SL+ T+ + +Y +++ ++G + +
Sbjct: 318 -----TLNDAMEVYGYVGKQDGIEELWRSLKRTRSDIHQSSYFSAITALGLVGEVAKARA 372
Query: 356 IIDQWKQSAT--SDFDISACNRLLGAFSDVGLTEKA 389
+ + + + F+ + +L ++ G+ EKA
Sbjct: 373 LCKELLAGSDEFTKFEQNPHALMLEVYARNGMMEKA 408
>gi|297806463|ref|XP_002871115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316952|gb|EFH47374.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 942
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 101/239 (42%), Gaps = 15/239 (6%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y +++ + E+AE L +++ + +Y+ MM Y V +K +V + +K
Sbjct: 418 YGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIVFKRLK 477
Query: 220 RKNVVPDIFTY----NLW--ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
P + TY NL+ + + L + +V K + G + Y ++N +
Sbjct: 478 ECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMK-------EEGVKHNLKTYSMMINGF 530
Query: 274 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
+ NA + + K + I Y+ +I + G+GN D+ Q K ++ + + T
Sbjct: 531 VKLKDWANA-FAVFEDMVKEGMKPDVILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPT 589
Query: 334 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
+R ++ I++ + G ++ E+ D ++ + N L+ + EKA E
Sbjct: 590 TRTFMPIINGFAKSGDMRRSLEVFDMMRRCGCVP-TVHTFNALINGLVEKRQMEKAVEI 647
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 81/195 (41%), Gaps = 2/195 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT ++ YA T KA E F R++ L + Y ++ G+++ V +E+
Sbjct: 662 TYTKIMQGYASVGDTGKAFEYFTRLQNEGLEVDIFTYEALLKACCKSGRMQSALAVTKEM 721
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+N+ + F YN+ I A ++ + + +M G D Y + ++ A
Sbjct: 722 SARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMK-KEGVKPDIHTYTSFISACSKAGD 780
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ N + T+ E E + TY LI +A +K ++ ++ K Y
Sbjct: 781 M-NRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAVGLKPDKAVYH 839
Query: 339 CILSSYLMLGHLKEV 353
C+L+S L + E
Sbjct: 840 CLLTSLLSRASIAEA 854
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 45/99 (45%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
T T+ AL++ + EKA E+ + + + +S N Y ++M Y SVG K
Sbjct: 624 TVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYF 683
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 254
++ + + DIFTY + +C + + EMS
Sbjct: 684 TRLQNEGLEVDIFTYEALLKACCKSGRMQSALAVTKEMS 722
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 47/98 (47%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
T TY L++LY KA E+ +K+ + N Y+ M+ ++ + V
Sbjct: 484 TVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVF 543
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
E++ ++ + PD+ YN I++ N+D+ + + EM
Sbjct: 544 EDMVKEGMKPDVILYNNIIAAFCGMGNMDRAIQTVKEM 581
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 82/198 (41%), Gaps = 2/198 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY ++ A E A LFE +K L + + YN ++ Y VG + V EE+
Sbjct: 253 TYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEM 312
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K PD+ TYN I+ I Q ++L M G + V Y L++ + A
Sbjct: 313 KDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMK-QRGLQPNVVTYSTLIDAFCKAGM 371
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L+ A + V+ + Q TY LI +G+ ++ ++ ++ + Y
Sbjct: 372 LLEA-NKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYT 430
Query: 339 CILSSYLMLGHLKEVGEI 356
+L G ++E E+
Sbjct: 431 ALLDGLCEDGRMREAEEL 448
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 98/241 (40%), Gaps = 13/241 (5%)
Query: 163 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 222
LLH + + A F+ + + LS + YN ++ G +E + EE+K K
Sbjct: 222 LLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKG 281
Query: 223 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 282
+ PDI TYN I + +EM D+G D + Y +L+N + + A
Sbjct: 282 LRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMK-DAGCEPDVITYNSLINCFCKFERIPQA 340
Query: 283 ESSTLVEAEKSITQRQWITYDFLIILYAGLG-----NKDKIDQIWKSLRMTKQKMTSRNY 337
++ + Q +TY LI + G NK +D I L+ + TS
Sbjct: 341 FEYLHGMKQRGL-QPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTS--- 396
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 397
++ + +G L E ++ + +Q+ + +I LL + G +A E LL
Sbjct: 397 --LIDANCKIGDLNEAFKLESEMQQAGV-NLNIVTYTALLDGLCEDGRMREAEELFGALL 453
Query: 398 Q 398
+
Sbjct: 454 K 454
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 2/148 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYTALL +AEELF + ++ + N +Y + Y+ +EK ++EE+
Sbjct: 428 TYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEM 487
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+KN+ PD+ Y I I+ + EM D G + + Y L++ Y
Sbjct: 488 NKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMM-DCGLTANSYIYTTLIDAYFKVGK 546
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLI 306
A + L E + + +TY LI
Sbjct: 547 TTEA-VNLLQEMQDLGIKITVVTYGVLI 573
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 96/246 (39%), Gaps = 16/246 (6%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
S YT L+ Y T +A L + ++ + + Y ++ +G V++ +
Sbjct: 531 SYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFD 590
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
+ R + P+I Y I +++ K +EM D G S D + Y +L++
Sbjct: 591 HMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEM-LDKGISPDKLVYTSLID--GNM 647
Query: 277 SHLVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGN----KDKIDQIWKSLRMTKQK 331
H E+ +L I + Y LI ++ G K +D++ + + Q
Sbjct: 648 KHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQV 707
Query: 332 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQ----SATSDFDISACNRLLGAFSDVGLTE 387
+ IC+L Y LG + E + D + S T D + +C + + ++
Sbjct: 708 LC----ICLLRKYYELGDINEALALHDDMARRGLISGTIDITVPSCLTAVTKLHKLCASQ 763
Query: 388 KANEFH 393
+FH
Sbjct: 764 SGTDFH 769
>gi|357166784|ref|XP_003580849.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Brachypodium distachyon]
Length = 904
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 90/207 (43%), Gaps = 2/207 (0%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y+ ++H + + ++AEEL +++ + Y+ MM Y + +K +V E +K
Sbjct: 377 YSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLK 436
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
P I +Y I+ + + EM G + Y L++ +I
Sbjct: 437 ECCFTPSIISYGCLINLYIKIGKVTKAIAISKEME-SYGIKHNNKTYSMLISGFIHLHDF 495
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 339
NA S E KS Q Y+ LI + +GN D+ +I + ++ + + ++R +
Sbjct: 496 ANA-FSIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRP 554
Query: 340 ILSSYLMLGHLKEVGEIIDQWKQSATS 366
I+ + + G +K I+D ++S +
Sbjct: 555 IIEGFAVAGDMKRALNILDLMRRSGCA 581
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 82/188 (43%), Gaps = 4/188 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT ++ YA KA E F ++K+ L + +Y ++ G+++ V E+
Sbjct: 621 TYTIIMRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREM 680
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + + F YN+ I A ++ + + +M D G + Y + +N A
Sbjct: 681 STQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKED-GVPPNIHTYTSYINACCKAGD 739
Query: 279 LVNAESSTLVEAEKSITQRQWI-TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
+ A+ ++E + + + TY LI +A D+ + ++ +++ K Y
Sbjct: 740 MQRAQK--VIEEMADVGLKPNLKTYTTLIKGWAKASLPDRALKSFEEMKLAGLKPDEAAY 797
Query: 338 ICILSSYL 345
C+++S L
Sbjct: 798 HCLVTSLL 805
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 56/293 (19%), Positives = 112/293 (38%), Gaps = 38/293 (12%)
Query: 147 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 206
FE +P ++ + ++ YA A FE ++ + NA ++ ++ Y
Sbjct: 261 FERIPKPSR--REFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAR 318
Query: 207 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 266
+ V VEE+K + + I TY++ I+ A + E G + + Y
Sbjct: 319 DMRGVLSCVEEMKAEGIELTIVTYSIIIAGFAKINDAQSADNLFKEAKAKLGDLNGII-Y 377
Query: 267 VNLVNIYITASHLVNAE-----------------------SSTLVEAEKS---ITQR--- 297
N+++ + + ++ AE T+++ EK + +R
Sbjct: 378 SNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKE 437
Query: 298 -----QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 352
I+Y LI LY +G K I K + K ++ Y ++S ++ L
Sbjct: 438 CCFTPSIISYGCLINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFAN 497
Query: 353 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 405
I ++ +S D + N L+ AF +G ++A + ++ P+N
Sbjct: 498 AFSIFEEMLKSGLQP-DRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSN 549
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 138/319 (43%), Gaps = 14/319 (4%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLS 153
+L L K + A ++ E M+ H V + Y T I+ +V + FE +
Sbjct: 340 LLNGLCKDGKVAKAKQVFE-MLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSR 398
Query: 154 AKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 211
+ TY AL++ + KAE+L +++S + + +N ++ Y + GQ+EK
Sbjct: 399 HIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKC 458
Query: 212 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
V+ ++++K + D+ ++ + + I + LD+M + V Y ++++
Sbjct: 459 FTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQV-YNSIID 517
Query: 272 IYITASHLVNAESSTLVEAEK-SITQRQWITYDFLIILYAGLGNKDKID---QIWKSLRM 327
YI + ++ LVE K S +TY+ L+ GL +ID ++ +LR
Sbjct: 518 AYIESGD--TEQALLLVEKMKNSGVSASIVTYNLLL---KGLCRSSQIDEAEELIYTLRN 572
Query: 328 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 387
+ +Y I+S+ G + E++ + + + C+ L+ A + G
Sbjct: 573 QGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRP-TLRTCHTLVSALASAGRVH 631
Query: 388 KANEFHMLLLQKNCAPTNA 406
+ +L KN P+++
Sbjct: 632 DMECLYQQMLHKNVEPSSS 650
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 99/233 (42%), Gaps = 11/233 (4%)
Query: 176 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
A ++F+ + ++ N + YN M+ ++ G +E + +++ P++ TYN+ +S
Sbjct: 213 ALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLS 272
Query: 236 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA-EKSI 294
T +D+ + +DEM+ S D + + + T ES T++ +S+
Sbjct: 273 GLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRT------GESQTMLSLFAESL 326
Query: 295 TQRQWITYDFLIILYAGL---GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLK 351
+ + IL GL G K Q+++ L T T+ Y +++ Y + L+
Sbjct: 327 KKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLR 386
Query: 352 EVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 404
I +Q K I+ N L+ + + KA + M + + P+
Sbjct: 387 GAFCIFEQMKSRHIRPDHITY-NALINGLCKLEMVTKAEDLVMEMEKSGVDPS 438
>gi|242092154|ref|XP_002436567.1| hypothetical protein SORBIDRAFT_10g004910 [Sorghum bicolor]
gi|241914790|gb|EER87934.1| hypothetical protein SORBIDRAFT_10g004910 [Sorghum bicolor]
Length = 492
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 107/247 (43%), Gaps = 8/247 (3%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y L+ + K EKA ELF+ + + N Y +++ Y G+ + +++ +K
Sbjct: 144 YIKLITMLGKCKKPEKAHELFQAMIDEGCAPNLESYTALVSAYSRSGRFHEAFNLLDRMK 203
Query: 220 -RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
PD+ TY++ I SC + ++VK L +M+ +G + V Y L++ Y A
Sbjct: 204 DTPGCQPDVKTYSILIKSCLHAYDFEKVKSLLTDMA-RAGIRPNTVTYNTLIDAYGKARR 262
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
ES+ L ++ W T + + + G + ++ ++ + + + Y
Sbjct: 263 FPEMESTLLKMLSQNCKPDIW-TMNSTLRAFGSSGQIETMESCYEKFQASGIVPNIKTYN 321
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL-- 396
+L SY +++G ++ ++ Q + I N ++ AF G E+ L+
Sbjct: 322 ILLDSYGKAKMYEKMGAVM-EYMQKYYYSWTIVTYNVVIDAFGRAGDLEQMEYIFRLMKS 380
Query: 397 --LQKNC 401
++ NC
Sbjct: 381 ERIKPNC 387
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 44/245 (17%), Positives = 95/245 (38%), Gaps = 38/245 (15%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+ Y A+ + E ++ N + N + + S GQ+E + E+
Sbjct: 249 TYNTLIDAYGKARRFPEMESTLLKMLSQNCKPDIWTMNSTLRAFGSSGQIETMESCYEKF 308
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ +VP+I TYN+ + S +++ ++ M KY I
Sbjct: 309 QASGIVPNIKTYNILLDSYGKAKMYEKMGAVMEYMQ----------KYYYSWTI------ 352
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+TY+ +I + G+ ++++ I++ ++ + K
Sbjct: 353 ---------------------VTYNVVIDAFGRAGDLEQMEYIFRLMKSERIKPNCVTLC 391
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
++ +Y G +K++ ++ + S + DI N L+ A+ VG + + L+ +
Sbjct: 392 SVVRAYGRAGEVKKIKTVLRIVENSDIT-LDIVFFNCLVDAYGRVGCLAEMWDILDLMKE 450
Query: 399 KNCAP 403
C P
Sbjct: 451 HRCKP 455
>gi|359490053|ref|XP_003634022.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
chloroplastic-like [Vitis vinifera]
gi|297745081|emb|CBI38673.3| unnamed protein product [Vitis vinifera]
Length = 900
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
Query: 147 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 206
F G +S E Y +L Y E + R+K+S+ + + YN M+ +Y G
Sbjct: 757 FNGFSVSL---EVYNCMLDSYGKEGQIESFRSVLRRMKESSCASDHYTYNIMINIYGEQG 813
Query: 207 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 266
+E+VA V+ E+K + PD+ +YN I + ++ + EM ++G D + Y
Sbjct: 814 WIEEVANVLTELKESGLGPDLCSYNTLIKAYGIAGMVEDAVVLVKEMR-ENGIQPDRITY 872
Query: 267 VNLVN 271
+NL+N
Sbjct: 873 INLIN 877
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/322 (16%), Positives = 130/322 (40%), Gaps = 40/322 (12%)
Query: 118 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 177
K+ + D+ Y I ++ + + + + +P ++ +Y+ AE
Sbjct: 515 KDTIFEDNLYHLVICSCKELGRLENAVKIYSQMPNKKPNLHIMCTMIDIYSTLGRFSDAE 574
Query: 178 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI-KRKNVVPDIF-------- 228
L+ ++K S +S + + ++ ++ +Y+ G ++ V+E + ++KN+VPDI+
Sbjct: 575 NLYLKLKSSEISLDMIAFSIVVRMYVKSGSLKDACSVLETMDEQKNIVPDIYLFCDMLRI 634
Query: 229 ---------------------------TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD 261
YN I+ CA L +D++ + DEM G +
Sbjct: 635 YQQCGMLDKLQDLYYRILKTGVTWDSEMYNCVINCCARALPVDELSRLFDEMLL-HGFAP 693
Query: 262 DWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQI 321
+ + ++++Y + A + ++ + I+Y+ +I Y + K+
Sbjct: 694 NTITLNVMLDVYGKSRLFKKARKVLWLARKRGLVDV--ISYNTIIAAYGQSKDLKKMLST 751
Query: 322 WKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFS 381
+ ++ ++ Y C+L SY G ++ ++ + K+S+ + D N ++ +
Sbjct: 752 VRQMQFNGFSVSLEVYNCMLDSYGKEGQIESFRSVLRRMKESSCAS-DHYTYNIMINIYG 810
Query: 382 DVGLTEKANEFHMLLLQKNCAP 403
+ G E+ L + P
Sbjct: 811 EQGWIEEVANVLTELKESGLGP 832
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 2/148 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y ++ Y +K +K +++ + S + +YN M+ Y GQ+E V+ +
Sbjct: 731 SYNTIIAAYGQSKDLKKMLSTVRQMQFNGFSVSLEVYNCMLDSYGKEGQIESFRSVLRRM 790
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K + D +TYN+ I+ I++V L E+ +SG D Y L+ Y A
Sbjct: 791 KESSCASDHYTYNIMINIYGEQGWIEEVANVLTELK-ESGLGPDLCSYNTLIKAYGIAG- 848
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLI 306
+V + E ++ Q ITY LI
Sbjct: 849 MVEDAVVLVKEMRENGIQPDRITYINLI 876
>gi|224069810|ref|XP_002303045.1| predicted protein [Populus trichocarpa]
gi|222844771|gb|EEE82318.1| predicted protein [Populus trichocarpa]
Length = 388
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 109/248 (43%), Gaps = 7/248 (2%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y L+ + K +KA +LF+ + + Y +++ Y G +K ++EE+K
Sbjct: 33 YVKLIVMLGKCKQPDKAHQLFQAMIDEGCAVTHESYTALLSAYGRSGLFDKAFSIMEEMK 92
Query: 220 R-KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ PD+ TY++ I SC D+V+ L +M G + V Y +++ Y A
Sbjct: 93 NTPDCRPDVHTYSILIKSCLQVFAFDKVQVLLSDME-SLGIRPNTVTYNTVIDAYGKAKM 151
Query: 279 LVNAESSTLVE--AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 336
E +TL+E +++ W T + I + G G + ++ ++ + + +
Sbjct: 152 FAEME-ATLMEMLSQQDCEPDVW-TMNSTIRAFGGSGQMEMMENCYEKFQSAGIEPNIKT 209
Query: 337 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 396
+ +L SY G+ +++ ++ ++ Q + I N ++ AF G ++ L+
Sbjct: 210 FNILLDSYGKAGNYQKMSAVM-EYMQRYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLM 268
Query: 397 LQKNCAPT 404
+ P+
Sbjct: 269 RSERIKPS 276
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 66/330 (20%), Positives = 129/330 (39%), Gaps = 10/330 (3%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
A + Q + EG T +L +S + A I E M + Y+ I
Sbjct: 49 AHQLFQAMIDEGCAVTHESYTALLSAYGRSGLFDKAFSIMEEMKNTPDCRPDVHTYSILI 108
Query: 132 DLMTKVFGIHSGERYF---EGLPLSAKTSETYTALLHLYAGAK-WTEKAEELFERVKQSN 187
+VF + E L + T TY ++ Y AK + E L E + Q +
Sbjct: 109 KSCLQVFAFDKVQVLLSDMESLGIRPNTV-TYNTVIDAYGKAKMFAEMEATLMEMLSQQD 167
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 247
+ N + + GQ+E + E+ + + P+I T+N+ + S N ++
Sbjct: 168 CEPDVWTMNSTIRAFGGSGQMEMMENCYEKFQSAGIEPNIKTFNILLDSYGKAGNYQKMS 227
Query: 248 KFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES-STLVEAEKSITQRQWITYDFLI 306
++ M S V Y +++ + A L E L+ +E+ + +T L+
Sbjct: 228 AVMEYMQ-RYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMRSER--IKPSCVTLCSLV 284
Query: 307 ILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATS 366
Y G +KI + + + + + + + C++ +Y L E+ E+++ ++
Sbjct: 285 RAYREAGKPEKIGSVLRFIENSDVTLDTVFFNCLVDAYGRLECFAEMKEVLELMEEKGCK 344
Query: 367 DFDISACNRLLGAFSDVGLTEKANEFHMLL 396
D ++ A+S G+T A + LL
Sbjct: 345 P-DKVTYRTMIKAYSIKGMTSHAKKLRNLL 373
>gi|223946379|gb|ACN27273.1| unknown [Zea mays]
gi|413924536|gb|AFW64468.1| pentatricopeptide repeat 5 [Zea mays]
Length = 386
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 100/217 (46%), Gaps = 7/217 (3%)
Query: 146 YFEGLPL---SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY 202
YFE + T TY LL +A A T++ + LF+ + +S +S + YN ++ Y
Sbjct: 72 YFEKMKCIERCQPTIVTYNILLRAFAQAGDTKQVDMLFKDLDESVVSPDVYTYNGVLDAY 131
Query: 203 MSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 262
G ++++ V+ +K PD+ T+N+ I S D++++ + S
Sbjct: 132 GKNGMIKEMESVLVRMKSTQCRPDVITFNILIDSYGRKQTFDKMEQVFKSL-LRSKERPT 190
Query: 263 WVKYVNLVNIYITASHLVNAESSTLVEAEKSIT-QRQWITYDFLIILYAGLGNKDKIDQI 321
+ +++ Y A AES +VE + + + ++T + LII+YA K Q+
Sbjct: 191 HPTFNSMITNYGRARLREKAES--VVEKMEELGFKPNYVTQECLIIMYAHCDCVSKARQV 248
Query: 322 WKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 358
+ L ++ K+ + +L +Y M G E ++D
Sbjct: 249 FDELVTSQTKVHLSSLNSMLEAYCMNGLHTEADRLLD 285
>gi|42567647|ref|NP_568141.2| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|122223689|sp|Q0WMY5.1|PP365_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g04810, chloroplastic; AltName: Full=Maize PPR4
homolog; Short=AtPPR4; Flags: Precursor
gi|110739199|dbj|BAF01515.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
gi|332003406|gb|AED90789.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 952
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 100/239 (41%), Gaps = 15/239 (6%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y +++ + E+AE L +++ + +Y+ MM Y V +K +V + +K
Sbjct: 417 YGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLK 476
Query: 220 RKNVVPDIFTY----NLW--ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
P + TY NL+ + + L + +V K + G + Y ++N +
Sbjct: 477 ECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMK-------EEGVKHNLKTYSMMINGF 529
Query: 274 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
+ NA + + K + I Y+ +I + G+GN D+ Q K ++ + + T
Sbjct: 530 VKLKDWANA-FAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPT 588
Query: 334 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
+R ++ I+ Y G ++ E+ D ++ + N L+ + EKA E
Sbjct: 589 TRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVP-TVHTFNGLINGLVEKRQMEKAVEI 646
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 81/194 (41%), Gaps = 2/194 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT ++ YA T KA E F R++ L + Y ++ G+++ V +E+
Sbjct: 661 TYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEM 720
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+N+ + F YN+ I A ++ + + +M G D Y + ++ A
Sbjct: 721 SARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMK-KEGVKPDIHTYTSFISACSKAGD 779
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ N + T+ E E + TY LI +A +K ++ ++ K Y
Sbjct: 780 M-NRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYH 838
Query: 339 CILSSYLMLGHLKE 352
C+L+S L + E
Sbjct: 839 CLLTSLLSRASIAE 852
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 44/99 (44%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
T T+ L++ + EKA E+ + + + +S N Y ++M Y SVG K
Sbjct: 623 TVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYF 682
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 254
++ + + DIFTY + +C + + EMS
Sbjct: 683 TRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMS 721
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L++LY KA E+ +K+ + N Y+ M+ ++ + V E++
Sbjct: 486 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM 545
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
++ + PD+ YN IS+ N+D+ + + EM
Sbjct: 546 VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEM 580
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic; AltName: Full=Protein PROTON GRADIENT
REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/238 (19%), Positives = 109/238 (45%), Gaps = 11/238 (4%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGL--- 150
++ L K+ AL++ +++ ++F + Y ID ++K ++ ++ FEG+
Sbjct: 861 VISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDY 920
Query: 151 ---PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 207
P A Y L++ + A + A LF+R+ + + + Y+ ++ VG+
Sbjct: 921 GCRPNCA----IYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGR 976
Query: 208 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 267
V++ +E+K + PD+ YNL I+ + +++ +EM G + D Y
Sbjct: 977 VDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYN 1036
Query: 268 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 325
+L+ + + + +V E +++ + T++ LI Y+ G + +++++
Sbjct: 1037 SLI-LNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1093
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 78/183 (42%), Gaps = 5/183 (2%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
T+ TY + Y + + A E FE++K ++ N + N + G+ + +
Sbjct: 432 TAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIF 491
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275
+K +VPD TYN+ + + ID+ K L EM ++G D + +L+N
Sbjct: 492 YGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMM-ENGCEPDVIVVNSLINTLYK 550
Query: 276 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
A + A + E + + +TY+ L+ AGLG KI + + QK
Sbjct: 551 ADRVDEAWKMFMRMKEMKL-KPTVVTYNTLL---AGLGKNGKIQEAIELFEGMVQKGCPP 606
Query: 336 NYI 338
N I
Sbjct: 607 NTI 609
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 40/209 (19%), Positives = 86/209 (41%), Gaps = 8/209 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y L+HL +++ +A E++ R+ + Y+ +M ++ V +++E+
Sbjct: 190 SYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM 249
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + P+++T+ + I I++ + L M D G D V Y L++ TA
Sbjct: 250 ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMD-DEGCGPDVVTYTVLIDALCTARK 308
Query: 279 LVNAESSTLVEAEKSITQRQ---WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
L A+ EK T R +TY L+ ++ + D + Q W +
Sbjct: 309 LDCAKEV----FEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVV 364
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSA 364
+ ++ + G+ E + +D +
Sbjct: 365 TFTILVDALCKAGNFGEAFDTLDVMRDQG 393
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 91/224 (40%), Gaps = 8/224 (3%)
Query: 144 ERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM 203
E++ + L + K TY L+ A E A+++F +VK + + YN ++ Y
Sbjct: 773 EKFTKDLGVQPKLP-TYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYG 831
Query: 204 SVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW 263
G+++++ + +E+ + T+N+ IS N+D ++ D S
Sbjct: 832 KSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTA 891
Query: 264 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQ-WITYDFLIILYAGLGNKDKIDQIW 322
Y L++ + L E+ L E R Y+ LI + G D ++
Sbjct: 892 CTYGPLIDGLSKSGRLY--EAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALF 949
Query: 323 KSLRMTKQKMTS--RNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
K RM K+ + + Y ++ M+G + E + K+S
Sbjct: 950 K--RMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESG 991
>gi|302768589|ref|XP_002967714.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
gi|300164452|gb|EFJ31061.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
Length = 384
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 104/240 (43%), Gaps = 10/240 (4%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKE-LRKSQRYKHALEISEWMVTHKEFVLSDSD--YA 128
A ++ R + +G +ATV I+ LR+ + HAL + E M KE + Y
Sbjct: 1 ACSLFYRMMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVM---KESGKKPDEILYN 57
Query: 129 TRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQS 186
++ + + + E+ + + ++ TYT L+ YA + +LF+ +K
Sbjct: 58 CLVNGLVNSGRLEAAEKILDDMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDK 117
Query: 187 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 246
S N+ YN ++ Y G ++ + +E+ D+ TYN+ I+ ++ +
Sbjct: 118 GESPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDM 177
Query: 247 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI 306
++ LDEM G D V Y L+++Y S+ V A E W TY+ ++
Sbjct: 178 ERLLDEMDT-KGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIW-TYNIML 235
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY LL +YA + KA E+ + ++ N YN M++ V + + E +
Sbjct: 195 TYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENL 254
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
K K VVP+I TY+ +S + K DEM ++G + Y L+ Y
Sbjct: 255 KSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEM-IEAGCIPCIIAYSGLIESY 308
>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 671
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 73/162 (45%), Gaps = 2/162 (1%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLS 153
++ L ++ R +A+E+ E M + Y++ I+ +++ + S F+ +P
Sbjct: 457 LIDSLCQNGRVNNAIEVFEQMPKYG-CTPDIVTYSSLINGLSEQGLVESAIELFQSMPCK 515
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
L L A+W E A EL + + + N + +N ++ G V++
Sbjct: 516 PDIFGYNAVLKGLCRAARW-EDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIE 574
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 255
V E++ + PDIFTYN I+ + +D ++ L MSC
Sbjct: 575 VFEQMPKYGSTPDIFTYNALINGFSEQGRLDDARRLLSTMSC 616
>gi|302757495|ref|XP_002962171.1| hypothetical protein SELMODRAFT_77736 [Selaginella moellendorffii]
gi|300170830|gb|EFJ37431.1| hypothetical protein SELMODRAFT_77736 [Selaginella moellendorffii]
Length = 731
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 68/130 (52%), Gaps = 2/130 (1%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQ-SNLSFNALMYNEMMTLYMSVGQVEKVALV 214
T+ T+ A++H+Y A T +AE L ++KQ + + YN ++ +Y+ ++E V+
Sbjct: 263 TTVTFNAMIHVYGKAGRTREAELLVTKMKQRKDCCPDVATYNSLIEMYVKNDKLELVSGC 322
Query: 215 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274
+E ++ V PD T+ IS+ AA + + + + EM SG D Y ++ +Y+
Sbjct: 323 LERMRDSGVSPDQVTFRTLISAYAANNVVWKAEALVQEME-GSGFFIDQAMYTVMIAMYV 381
Query: 275 TASHLVNAES 284
A + AES
Sbjct: 382 RARDVSKAES 391
>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/317 (20%), Positives = 133/317 (41%), Gaps = 18/317 (5%)
Query: 93 HILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPL 152
HIL+ L +++ H I E + + + D D A + K +G +S + L +
Sbjct: 48 HILRRLSETRMVNHVSRIVELIRSQE--CKCDEDVALSV---IKTYGKNSMPD--QALDV 100
Query: 153 SAKTSE---------TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM 203
+ E +Y LL+ + AK K E LF + + ++ N YN ++ +
Sbjct: 101 FKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSC 160
Query: 204 SVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW 263
+ EK ++ + ++ PD+F+Y+ I+ A +D + DEMS + G + D
Sbjct: 161 KKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMS-ERGVAPDV 219
Query: 264 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 323
Y L++ ++ A E S T++ +I + G D +IW+
Sbjct: 220 TCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWE 279
Query: 324 SLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDV 383
++ +++ Y ++ G++ + + ++ + S D+ N +LG F
Sbjct: 280 RMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKAS-IDVVTYNTMLGGFCRC 338
Query: 384 GLTEKANEFHMLLLQKN 400
G +++ E ++ KN
Sbjct: 339 GKIKESLELWRIMEHKN 355
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY++L+H A +KAE +F + + S + + YN M+ + G++++ + +
Sbjct: 292 TYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIM 351
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQ 245
+ KN V +I +YN+ I ID+
Sbjct: 352 EHKNSV-NIVSYNILIKGLLENGKIDE 377
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 137/341 (40%), Gaps = 19/341 (5%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDS-DYATR 130
A N+ + + EG + TV +LK L + + AL+I W + K V D Y+T
Sbjct: 421 AFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQI--WHLMMKRGVAPDEVGYSTL 478
Query: 131 IDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQSNL 188
+D + K+ ++ + K+ T+ ++ +AEE+F+++K
Sbjct: 479 LDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGC 538
Query: 189 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 248
S + + Y ++ Y V + V ++R+ + P I YN IS + + +V
Sbjct: 539 SPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTD 598
Query: 249 FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIIL 308
L EM G + + V Y L++ + L A SS E ++ I +
Sbjct: 599 LLTEMGI-RGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICS----TM 653
Query: 309 YAGLGNKDKIDQIWKSLRMTKQKMTSRNYI----CILSSYLMLGHLKEVGEIIDQWKQSA 364
+GL +ID+ + QKM + C L S + ++++ + +D+ ++
Sbjct: 654 VSGLYRLGRIDEA----NLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTF 709
Query: 365 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 405
+I N + G + A F +L K P N
Sbjct: 710 LLPNNI-VYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDN 749
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/258 (19%), Positives = 112/258 (43%), Gaps = 10/258 (3%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
A + + +L +Y T+ A +F+ + + + N ++ + G+
Sbjct: 153 AFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHY 212
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
V +++ R +VPD+F ++ +++ +D+ F+ +M + G + V Y +L+N Y
Sbjct: 213 VYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKME-NLGVEPNIVTYHSLINGY 271
Query: 274 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
++ + A+ +EK ++ R +TY LI G + K+D+ K LR +++
Sbjct: 272 VSLGDVEAAKGVLKFMSEKGVS-RNVVTYTLLI---KGYCKQCKMDEAEKVLRGMQEEAA 327
Query: 334 ----SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
R Y ++ Y G + + ++D+ + ++ CN L+ + G +A
Sbjct: 328 LVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKT-NLFICNSLINGYCKRGEIHEA 386
Query: 390 NEFHMLLLQKNCAPTNAS 407
++ N P + S
Sbjct: 387 EGVITRMVDWNLKPDSYS 404
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 5/178 (2%)
Query: 98 LRKSQRYKHALEISEWM-VTHKEFVLSDSD-YATRIDLMTKVFGIHSGERYFEGLPLSAK 155
L+ RY +I++ + + K F+L ++ Y I + K + R+F L L
Sbjct: 686 LKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGF 745
Query: 156 TSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
+ TY L+H Y+ A ++A L + + + L N + YN ++ V++
Sbjct: 746 VPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQR 805
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
+ ++ +K + P++ TYN I N+D K D+M + G S V Y L+N
Sbjct: 806 LFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKM-IEEGISPSVVTYSALIN 862
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 62/121 (51%), Gaps = 1/121 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY AL++ ++ ++A+ LF ++ Q L N + YN ++ Y +G ++ + +++
Sbjct: 786 TYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKM 845
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + P + TY+ I+ +I++ K L++M +G ++Y LV YI +
Sbjct: 846 IEEGISPSVVTYSALINGLCKHGDIERSMKLLNQM-IKAGVDSKLIEYCTLVQGYIRSGE 904
Query: 279 L 279
+
Sbjct: 905 M 905
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 94/231 (40%), Gaps = 2/231 (0%)
Query: 173 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 232
++A ++++ + N + Y+ ++ Y+S+G VE V++ + K V ++ TY L
Sbjct: 242 VDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTL 301
Query: 233 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 292
I +D+ +K L M ++ D Y L++ Y + +A L E +
Sbjct: 302 LIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDA-VRLLDEMLR 360
Query: 293 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 352
+ + LI Y G + + + + K S +Y +L Y GH E
Sbjct: 361 LGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSE 420
Query: 353 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
+ D+ Q + N LL VG + A + L++++ AP
Sbjct: 421 AFNLCDKMLQEGIEP-TVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAP 470
>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
[Vitis vinifera]
Length = 811
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 2/168 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T A++ +Y + KA E+ + +K+ + + YN +M +Y E+ ++ EI
Sbjct: 623 TLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREI 682
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K + PDI +YN I + + + L EM +SG + D + Y + Y S
Sbjct: 683 LAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMR-ESGPAPDIITYNTFIASYAADSM 741
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 326
V A + Q TY+ ++ Y L +D+ +LR
Sbjct: 742 FVEAIDVVCYMIKHGCKPNQS-TYNSIVDWYCKLNRRDEASMFVNNLR 788
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 122/296 (41%), Gaps = 8/296 (2%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKE--FVLSDSDYATRIDLMTKVFGIHSGERYFEGLP 151
I+K L ++ AL + EW+ KE +L+ S A I ++ K + + L
Sbjct: 133 IVKGLGFYKKCDTALRVFEWVRNRKESELLLNGSIIAVIISILGKGGRVSAAASLLHNLC 192
Query: 152 LSAKTSETY--TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV- 208
+ Y T+++ + +A +F+++++ + YN ++ +Y +G
Sbjct: 193 KDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKMGMPW 252
Query: 209 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268
K+ +V+ +K + PD +TYN IS C ++ L EM +G S D V Y
Sbjct: 253 NKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKL-AGFSPDKVTYNA 311
Query: 269 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 328
L+++Y S L E E + +TY+ LI YA G + ++ +
Sbjct: 312 LLDVY-GKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEK 370
Query: 329 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 384
K Y +LS + G K +I ++ + +I N L+ + G
Sbjct: 371 GIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKP-NICTFNALIKMHGNRG 425
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/246 (17%), Positives = 107/246 (43%), Gaps = 5/246 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY ALL +Y ++ +++A E+ + ++ + + + YN +++ Y G +E + ++
Sbjct: 308 TYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQM 367
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K + PD+FTY +S + +EM + G + + L+ ++
Sbjct: 368 VEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMR-NEGCKPNICTFNALIKMHGNRGK 426
Query: 279 LVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
E + E K+ +T++ L+ ++ G ++ ++K ++ +
Sbjct: 427 FT--EMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTF 484
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 397
++SSY G + + + ++ + D+S+ N +L A + GL +++ + +
Sbjct: 485 NTLISSYSRCGSFDQAMAVYKRMLEAGVNP-DLSSYNAVLAALARGGLWKQSEKVLAEMK 543
Query: 398 QKNCAP 403
C P
Sbjct: 544 DGRCKP 549
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 103/254 (40%), Gaps = 14/254 (5%)
Query: 142 SGERYFEGLPLSAKTSE--------TYTALLHLYA--GAKWTEKAEELFERVKQSNLSFN 191
S RY E + + K E TY +L++Y G W K L +R+K + ++ +
Sbjct: 212 SNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKMGMPWN-KMVGLVDRMKSAGIAPD 270
Query: 192 ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 251
+ YN +++ E+ A V++E+K PD TYN + + + + L
Sbjct: 271 SYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQ 330
Query: 252 EMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAG 311
EM +G V Y +L++ Y L +A EK I + TY L+ +
Sbjct: 331 EME-GNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGI-KPDVFTYTTLLSGFEK 388
Query: 312 LGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDIS 371
G QI++ +R K + ++ + G E+ ++ + K S DI
Sbjct: 389 AGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSP-DIV 447
Query: 372 ACNRLLGAFSDVGL 385
N LL F G+
Sbjct: 448 TWNTLLSVFGQNGM 461
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 105/253 (41%), Gaps = 9/253 (3%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
A S TY L+ E+A + + +K + S + + YN ++ +Y + ++
Sbjct: 268 APDSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAME 327
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
V++E++ P I TYN IS+ A ++ + ++M + G D Y L++ +
Sbjct: 328 VLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQM-VEKGIKPDVFTYTTLLSGF 386
Query: 274 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
A A E + T++ LI ++ GN+ K ++ K K
Sbjct: 387 EKAGK-DKAAVQIFEEMRNEGCKPNICTFNALIKMH---GNRGKFTEMMKVFEDIKTFQC 442
Query: 334 SRNYI---CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 390
S + + +LS + G EV + + K++ + N L+ ++S G ++A
Sbjct: 443 SPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVP-ERDTFNTLISSYSRCGSFDQAM 501
Query: 391 EFHMLLLQKNCAP 403
+ +L+ P
Sbjct: 502 AVYKRMLEAGVNP 514
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 73/188 (38%), Gaps = 37/188 (19%)
Query: 159 TYTALLHLYAGAKWTEK----AEEL-------------------------------FERV 183
TY +LLH YA K E+ AEE+ F +
Sbjct: 553 TYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLEL 612
Query: 184 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 243
+Q S + N M+++Y V K +++ +KR P + TYN + + + N
Sbjct: 613 RQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANF 672
Query: 244 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 303
++ ++ L E+ G D + Y ++ Y + +A S L E +S ITY+
Sbjct: 673 ERSEEILREI-LAKGIRPDIISYNTVIYAYCRNGRMRDA-SRVLSEMRESGPAPDIITYN 730
Query: 304 FLIILYAG 311
I YA
Sbjct: 731 TFIASYAA 738
>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
Length = 545
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 110/257 (42%), Gaps = 18/257 (7%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY AL+ + ++A +LFE + + YN M+ G++E + +++
Sbjct: 242 TYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDM 301
Query: 219 KRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
R+ ++ PD+FTY+ I+ + ++ + +EM D+G S D V Y L++ +
Sbjct: 302 VREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEM-LDTGCSPDVVTYNTLLDGLCKSG 360
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN- 336
A ++ ITY LI + K+D++ ++++ K+ M R+
Sbjct: 361 CEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFC------KVDRLGDAVKLAKE-MEGRSL 413
Query: 337 ------YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 390
+ ++ + E E+ + ++ D + N +L + + + A
Sbjct: 414 LPDAVTFTTVIQKLCKESRIDEAHELFESIGKTCKPDSVLF--NTMLAGYCKITRIDDAK 471
Query: 391 EFHMLLLQKNCAPTNAS 407
+ H +L CAPT A+
Sbjct: 472 KLHDRMLDSGCAPTLAT 488
>gi|297826989|ref|XP_002881377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327216|gb|EFH57636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 589
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 87/191 (45%), Gaps = 25/191 (13%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQ-------SNLSFNA-----LM-----------Y 195
TYTAL++ +A EKAEE+FE++++ + + A LM Y
Sbjct: 311 TYTALVNAFAREGLCEKAEEIFEQLQEDGHIDSRAGYPYGAAEIFSLMQHMGCEPDRASY 370
Query: 196 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 255
N M+ Y G V EE+KR + P + ++ L +S+ + ++ + + + EMS
Sbjct: 371 NIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSRARDVTKCEAIVKEMS- 429
Query: 256 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 315
++G D +++N+Y E L E E TY+ LI +Y G
Sbjct: 430 ENGVEPDTFVLNSMLNLYGRLGQFTKME-KILAEMENGPCTADISTYNILINIYGKAGFL 488
Query: 316 DKIDQIWKSLR 326
++I++++ L+
Sbjct: 489 ERIEELFVELK 499
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 5/146 (3%)
Query: 109 EISEWMVTHKEFVLSDS-DYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLY 167
E+SE V FVL+ + R+ TK+ I + E P +A S TY L+++Y
Sbjct: 427 EMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILA---EMENGPCTADIS-TYNILINIY 482
Query: 168 AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 227
A + E+ EELF +K+ N + + + + Y K + EE+ PD
Sbjct: 483 GKAGFLERIEELFVELKERNFKPDVVTWTSRIGAYSRKKLYVKCLEIFEEMIDSGCAPDG 542
Query: 228 FTYNLWISSCAATLNIDQVKKFLDEM 253
T + +S+C++ ++QV L M
Sbjct: 543 GTAKVLLSACSSEDQVEQVTSVLRTM 568
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 3/154 (1%)
Query: 85 QATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGE 144
A+ +L ++ +LR ++++ + + EW++ F + ID + F E
Sbjct: 129 HASWDDLINVSVQLRLNKKWDSIILVCEWILRRSSFQPDVICFNLLIDAYGQKFRFKEAE 188
Query: 145 RYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY 202
+ L S T +TYT L+ Y A EKAE + ++ ++S + +YN +
Sbjct: 189 SLYVQLLESRCVPTEDTYTLLIKAYCMAGLIEKAEAVLIEMQNHHVSPSVTVYNAYIEGL 248
Query: 203 MS-VGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
M G E+ V + +KR P TYNL I+
Sbjct: 249 MKRKGNTEQAIDVFQRMKRDRCKPTTETYNLMIN 282
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Query: 139 GIHS-GERYFEGLPL--SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 195
G+HS E FE + A T +++ LL Y+ A+ K E + + + ++ + + +
Sbjct: 381 GLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSRARDVTKCEAIVKEMSENGVEPDTFVL 440
Query: 196 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
N M+ LY +GQ K+ ++ E++ DI TYN+ I+ ++++++ E+
Sbjct: 441 NSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVEL 498
>gi|255641788|gb|ACU21163.1| unknown [Glycine max]
Length = 481
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 127/282 (45%), Gaps = 14/282 (4%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVK 184
YA+ ++ + I G R +P S K + LL LYA + + A +LF+++
Sbjct: 93 YASLLETCYRFQAILHGIRVHRLIPTSLLHKNVGISSKLLRLYASCGYLDDAHDLFDQMA 152
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
+ + S A +N +++ Y VG ++ + ++ + V D+FT+ + CA ++
Sbjct: 153 KRDTS--AFPWNSLISGYAQVGHYDEAIALYFQMVEEGVEADLFTFPRVLKVCAGIGSV- 209
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 304
QV + + + +G + D LV++Y +V A + + R ++++
Sbjct: 210 QVGEEVHRHAIRAGFAADGFILNALVDMYSKCGDIVKAR-----KVFDKMPHRDPVSWNS 264
Query: 305 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
++ Y G + + I++ + + + S + +L+ LG +G I W S
Sbjct: 265 MLTAYVHHGLEVQAMNIFRQMLLEGCEPDSVSISTVLTGVSSLG----LGVQIHGWVISQ 320
Query: 365 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNA 406
++++S N L+ +S+ G EKA L+ +++ N+
Sbjct: 321 GHEWNLSIANSLIMMYSNHGRLEKARWVFNLMPERDVVSWNS 362
>gi|255551975|ref|XP_002517032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543667|gb|EEF45195.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 875
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 111/223 (49%), Gaps = 4/223 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y++L+ + A A +KA+ ++++++ L + + Y +++ ++ +G++E V +E+
Sbjct: 575 SYSSLVQILASADLPDKAKHYLKKMQEAGLVSDCVQYCAVISSFVKLGKLEMAEEVYKEM 634
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+V PDI Y + I++ A + + + ++D M +G + V Y +L+ +Y +
Sbjct: 635 VGFDVKPDIIVYGVLINAFADSGCVKEAISYIDAMK-GAGLPGNTVIYNSLIKLYTKVGY 693
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L A+ + + + + + + +I LY+ ++I++S++ K Y
Sbjct: 694 LREAQETYKLLQSSDVGPETY-SSNCMIDLYSEQSMVKPAEEIFESMK-RKGDANEFTYA 751
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFS 381
+L Y LG ++ +I Q ++ + +S N +LG ++
Sbjct: 752 MMLCMYKRLGWFEQAIQIAKQMRELGLLTYLLSY-NNVLGLYA 793
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 91/201 (45%), Gaps = 3/201 (1%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
+S TY ++ Y A ++A ++F + + + + +N M+ + + GQ+E+VAL++
Sbjct: 329 SSHTYNTMIDTYGKAGQIKEASDIFAEMLRKRILPTTVTFNTMIHICGNQGQLEEVALLM 388
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275
++++ PD TYN+ I A +I+ + M D D V Y L+ + +
Sbjct: 389 QKMEELRCPPDTRTYNILIFIHAKHNDINMAASYFKRMKKDQ-LQPDLVSYRTLLYAF-S 446
Query: 276 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
H+VN + + E ++ + T L +Y G +K +W M+S
Sbjct: 447 IRHMVNDAENLVSEMDEKGIEIDEYTQSALTRMYIEAGMLEK-SWLWFWRFHLAGNMSSE 505
Query: 336 NYICILSSYLMLGHLKEVGEI 356
Y + +Y GH+KE +
Sbjct: 506 CYSANIDAYGERGHVKEAARV 526
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 67/141 (47%), Gaps = 4/141 (2%)
Query: 171 KWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 230
K T KA E +Q ++S ++ YN M+ Y GQ+++ + + E+ RK ++P T+
Sbjct: 309 KVTGKASVRVENERQMDVSLSSHTYNTMIDTYGKAGQIKEASDIFAEMLRKRILPTTVTF 368
Query: 231 NLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL-VNAESSTLVE 289
N I C +++V + +M D + N++ I+I A H +N +S
Sbjct: 369 NTMIHICGNQGQLEEVALLMQKMEELRCPPD--TRTYNIL-IFIHAKHNDINMAASYFKR 425
Query: 290 AEKSITQRQWITYDFLIILYA 310
+K Q ++Y L+ ++
Sbjct: 426 MKKDQLQPDLVSYRTLLYAFS 446
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKTSE-TYTALLHLYAGAKWTEKAEELFERVKQSNLS 189
IDL ++ + E FE + +E TY +L +Y W E+A ++ +++++ L
Sbjct: 720 IDLYSEQSMVKPAEEIFESMKRKGDANEFTYAMMLCMYKRLGWFEQAIQIAKQMRELGLL 779
Query: 190 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 230
L YN ++ LY G+ ++ +E+ + PD T+
Sbjct: 780 TYLLSYNNVLGLYALDGRFKEAVGTFKEMVGAGIQPDDCTF 820
>gi|255548349|ref|XP_002515231.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545711|gb|EEF47215.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 505
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 106/253 (41%), Gaps = 12/253 (4%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
+T+ LL +G K +E+AE FE +++ + + + YN ++ +Y ++EK VVE+
Sbjct: 211 QTFNILL---SGWKQSEEAELFFEEMRELGIKPDVVSYNSLIDVYCKDREMEKAYKVVEK 267
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
++ +++ PD+ TY I D+ + L+EM + G D Y ++ Y A
Sbjct: 268 MREEDISPDVITYTSIIGGLGLVGQPDKARDILNEMK-EYGCYPDVAAYNAVIRNYCIAK 326
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL-RMTKQKMTSRN 336
L +A + A K ++ F + Y + + W RM +
Sbjct: 327 RLGDASNLMDEMASKGLSPNATTYNLFFRVFYWS----NDLRNSWSLYRRMMESGCLPNT 382
Query: 337 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFD--ISACNRLLGAFSDVGLTEKANEFHM 394
C+ L H ++V + W F I + L D+G +A + +
Sbjct: 383 QSCMFLIRLFRKH-EKVEMALTLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKCFL 441
Query: 395 LLLQKNCAPTNAS 407
+++K P+N S
Sbjct: 442 QMIEKGHKPSNVS 454
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 91/206 (44%), Gaps = 2/206 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +L+ Y K KA+ + + Q ++ + YN ++ + + +V++ + +E+
Sbjct: 304 TYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEM 363
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K+++PD+ TYN I I K +DEM D G D + Y ++++ + +H
Sbjct: 364 HHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMH-DRGVPPDIITYSSILDA-LCKNH 421
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
V+ + L + + + TY LI G + I++ L + +T Y
Sbjct: 422 QVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYT 481
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSA 364
++ + G E ++ + K ++
Sbjct: 482 VMIHGFCNKGLFDEALALLSKMKDNS 507
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 32/163 (19%), Positives = 71/163 (43%), Gaps = 5/163 (3%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
++Y L+ + K ++A LF+ + ++ + + YN ++ +G++ +V+E
Sbjct: 338 QSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDE 397
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
+ + V PDI TY+ + + +D+ L ++ D G + Y L++
Sbjct: 398 MHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLK-DQGIRPNMYTYTILIDGLCKGG 456
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQ 320
L +A + E + + IT + ++ G NK D+
Sbjct: 457 RLEDAHNI----FEDLLVKGYNITVNTYTVMIHGFCNKGLFDE 495
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 41/230 (17%), Positives = 92/230 (40%), Gaps = 3/230 (1%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y+ ++ K A +L+ + +S N + Y+ +++ + +VGQ++ + ++
Sbjct: 200 YSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMI 259
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
+N+ PD++T+N+ + + + K M G + V Y +L++ Y
Sbjct: 260 LENIKPDVYTFNILVDGFCKDGKMKEGKTVF-AMMMKQGIKPNVVTYCSLMDGYCLVKE- 317
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 339
VN S L + +Y+ LI + + D+ ++K + Y
Sbjct: 318 VNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNS 377
Query: 340 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
++ LG + +++D+ DI + +L A +KA
Sbjct: 378 LIDGLCKLGKISYALKLVDEMHDRGVPP-DIITYSSILDALCKNHQVDKA 426
>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 755
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+YTA + Y E+A EL ++ L+ N + YN ++ G+ EK +++E+
Sbjct: 567 SYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKEL 626
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 270
K V PD+ +YNL IS+C ++ L EM + G + D + Y + +
Sbjct: 627 KETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAE-GLTPDVISYTSAI 677
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 71/177 (40%), Gaps = 6/177 (3%)
Query: 100 KSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSET 159
KS R+K ALE+ + M K Y + I+ K +P T
Sbjct: 402 KSGRWKEALELLKEM-PAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNV 460
Query: 160 YTALLHLYAGA---KWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
++ + + A +W E EL ++ L+ N + YN + GQ EK ++
Sbjct: 461 ISSNIAIRACGERGRWQE-GLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLA 519
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
++K + PD TYN I++C+ + L EM G + D + Y ++ Y
Sbjct: 520 KMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMP-GQGLTPDVISYTAAIDAY 575
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 1/111 (0%)
Query: 161 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 220
TA+ +W + E L E +Q +S N YN + S Q E ++ E+
Sbjct: 149 TAITTCGRQGQWEKALELLREIPEQEGVSPNVFCYNSAIEACGSGDQWEIAVSLLREMAD 208
Query: 221 KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
+ VVPD +YN I +C ++V L EM G + D + Y +++
Sbjct: 209 REVVPDEISYNSAIKACGRGGQWERVIGLLREMP-SVGLTPDAITYNSVIT 258
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 16/118 (13%)
Query: 169 GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIF 228
G +W E+ L + L+ +A+ YN ++T GQ ++ V+ E+ K + P+
Sbjct: 228 GGQW-ERVIGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETI 286
Query: 229 TYNLWISSCAATLNIDQVKKFLDEMSCDS---------------GGSDDWVKYVNLVN 271
+YN+ I +C + + + L +M GG W V+L++
Sbjct: 287 SYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLD 344
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 65/156 (41%), Gaps = 23/156 (14%)
Query: 95 LKELRKSQRYKHALEISEWMVTHK------------EFVLSDSDYATRIDLMTKVFGIHS 142
++ +S R+K A+E+ M + + + T +DL+ ++ G
Sbjct: 292 IRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRG- 350
Query: 143 GERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY 202
++ T +A++ G +W EKA EL V L+ +A +N +
Sbjct: 351 ---------VAPNTIHFNSAIVACGKGGQW-EKAVELLREVTALGLTPDATSFNSAIAAC 400
Query: 203 MSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCA 238
G+ ++ +++E+ K + PD +YN I +C
Sbjct: 401 TKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACG 436
>gi|9758456|dbj|BAB08985.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
Length = 949
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 102/244 (41%), Gaps = 24/244 (9%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y +++ + E+AE L +++ + +Y+ MM Y V +K +V + +K
Sbjct: 417 YGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLK 476
Query: 220 RKNVVPDIFTY----NLW--ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
P + TY NL+ + + L + +V K + G + Y ++N +
Sbjct: 477 ECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMK-------EEGVKHNLKTYSMMINGF 529
Query: 274 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
+ NA + + K + I Y+ +I + G+GN D+ Q K ++ + + T
Sbjct: 530 VKLKDWANA-FAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPT 588
Query: 334 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDV--GLTEKANE 391
+R ++ I+ Y G ++ E+ D ++ C + F+ + GL EK
Sbjct: 589 TRTFMPIIHGYAKSGDMRRSLEVFDMMRR--------CGCVPTVHTFNGLINGLVEKRQA 640
Query: 392 FHML 395
+L
Sbjct: 641 VEIL 644
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 81/194 (41%), Gaps = 2/194 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT ++ YA T KA E F R++ L + Y ++ G+++ V +E+
Sbjct: 658 TYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEM 717
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+N+ + F YN+ I A ++ + + +M G D Y + ++ A
Sbjct: 718 SARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMK-KEGVKPDIHTYTSFISACSKAGD 776
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ N + T+ E E + TY LI +A +K ++ ++ K Y
Sbjct: 777 M-NRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYH 835
Query: 339 CILSSYLMLGHLKE 352
C+L+S L + E
Sbjct: 836 CLLTSLLSRASIAE 849
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L++LY KA E+ +K+ + N Y+ M+ ++ + V E++
Sbjct: 486 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM 545
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
++ + PD+ YN IS+ N+D+ + + EM
Sbjct: 546 VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEM 580
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 71/148 (47%), Gaps = 2/148 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYTAL+ Y A ++A L ++ + L+ N + Y ++ G+V+ ++ E+
Sbjct: 429 TYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEM 488
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K + P++ TYN I+ NI+Q K ++EM +G D + Y +++ Y
Sbjct: 489 SEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDL-AGFFPDTITYTTIMDAYCKMGE 547
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLI 306
+ A + +K + Q +T++ L+
Sbjct: 548 MAKAHELLRIMLDKGL-QPTIVTFNVLM 574
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/283 (19%), Positives = 104/283 (36%), Gaps = 44/283 (15%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +++ +AE++ +K + + ++Y +++ + G V + +E+
Sbjct: 324 TYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEM 383
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
KRK +VPD TY I + + +K EM G D V Y L++ Y A
Sbjct: 384 KRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEM-LSKGLKPDEVTYTALIDGYCKAGE 442
Query: 279 LVNAESSTLVEAEKSIT----------------------------------QRQWITYDF 304
+ A S EK +T Q TY+
Sbjct: 443 MKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNA 502
Query: 305 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI----IDQW 360
LI +GN ++ ++ + + + + Y I+ +Y +G + + E+ +D+
Sbjct: 503 LINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKG 562
Query: 361 KQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
Q F++ L+ F G+ E +L K P
Sbjct: 563 LQPTIVTFNV-----LMNGFCMSGMLEDGERLIKWMLDKGIMP 600
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/280 (18%), Positives = 106/280 (37%), Gaps = 36/280 (12%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y+ ++ Y + K +L E +++ L N YN +++ G+V + V+ +
Sbjct: 289 SYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVM 348
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS------------------CDSGG- 259
K + + PD Y IS + N+ K DEM C +G
Sbjct: 349 KNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKV 408
Query: 260 ---------------SDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 304
D V Y L++ Y A + A S EK +T +TY
Sbjct: 409 VEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTP-NVVTYTA 467
Query: 305 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
L+ G D +++ + + Y +++ +G++++ +++++ +
Sbjct: 468 LVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAG 527
Query: 365 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 404
D ++ A+ +G KA+E ++L K PT
Sbjct: 528 FFP-DTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPT 566
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 104/245 (42%), Gaps = 3/245 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y +LHL ++A L +++ + + Y+ ++ Y V Q+ KV ++EE+
Sbjct: 254 SYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEEL 313
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+RK + P+ +TYN IS T + + ++ L M D+ V Y L++ + + +
Sbjct: 314 QRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVV-YTTLISGFGKSGN 372
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
V+ E E ++ ++TY +I G + +++ + K Y
Sbjct: 373 -VSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYT 431
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
++ Y G +KE + +Q + + ++ L+ G + ANE + +
Sbjct: 432 ALIDGYCKAGEMKEAFSLHNQMVEKGLTP-NVVTYTALVDGLCKCGEVDIANELLHEMSE 490
Query: 399 KNCAP 403
K P
Sbjct: 491 KGLQP 495
Score = 41.2 bits (95), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 43/233 (18%), Positives = 98/233 (42%), Gaps = 13/233 (5%)
Query: 176 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
A +F + + +N + YN ++ L +G+V++ ++ +++ + VPD+ +Y++ +
Sbjct: 236 AFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVD 295
Query: 236 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 295
+ +V K ++E+ G + Y ++++ +V AE V + I
Sbjct: 296 GYCQVEQLGKVLKLMEELQ-RKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIF 354
Query: 296 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 355
+ Y LI +G G + +K K+K +++ S M+ L + G+
Sbjct: 355 PDN-VVYTTLI---SGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTS---MIHGLCQAGK 407
Query: 356 IIDQWK-----QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
+++ K S D L+ + G ++A H +++K P
Sbjct: 408 VVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTP 460
>gi|359497557|ref|XP_003635566.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17670-like, partial [Vitis vinifera]
Length = 253
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 96/214 (44%), Gaps = 3/214 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT L+ K +A L E + ++ + +YN +M Y + + + V +++
Sbjct: 22 TYTILIDNVCNGKNLREATRLLEVLGEAGFKPDCYVYNTIMKGYCILDKGSEAIGVYKKM 81
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K + V PD+ TYN I + + + + +KFLD M+ + G D V Y +L+N +
Sbjct: 82 KEEGVEPDLVTYNTLIFGLSKSGRVKEARKFLDIMA-EMGHFPDAVTYTSLMNGLCREGN 140
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ A + L E E TY+ L+ L ++ +++ ++ K+ +Y
Sbjct: 141 ALGA-LALLEEMEAKGCSPNSCTYNTLLHGLCKLRMLERGIELYGVMKSGGMKLEKASYA 199
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA 372
+ + G + E E D +S + D D++A
Sbjct: 200 TFVRALCKEGRVAEAYEAFDYVVESKSFD-DVTA 232
>gi|218199303|gb|EEC81730.1| hypothetical protein OsI_25362 [Oryza sativa Indica Group]
Length = 583
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 106/254 (41%), Gaps = 15/254 (5%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
++ Y ++ LYA ++A LF +++ +A +YN ++ + GQ ++E
Sbjct: 11 NDIYGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIME 70
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
++ R + P TYN I++C A N + + +M+ + G D LV I
Sbjct: 71 DMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPD-------LVTHNIVL 123
Query: 277 SHLVNAESSTLVEAEKSITQRQWITYD-----FLIILYAGLGNKDKIDQIWKSLRMTKQK 331
S L N + + I + +T D +I +G + +++ S+R + K
Sbjct: 124 SALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTK 183
Query: 332 MTSR--NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
Y I+ SY + G ++ I D +I A N LLGA++ G+ +A
Sbjct: 184 CPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKP-NIVAYNSLLGAYASRGMHREA 242
Query: 390 NEFHMLLLQKNCAP 403
L+ + P
Sbjct: 243 LAIFNLIKKNGLRP 256
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 55/93 (59%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+YT+LL+ Y + EKA E+F ++K+++ N + YN ++ Y S G +++ ++ E+
Sbjct: 260 SYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEM 319
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 251
++ + PD+ + + +++C I +++ L+
Sbjct: 320 EKDGIQPDVVSISTLLAACGRCRQITRIETILE 352
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 97/226 (42%), Gaps = 3/226 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT+++H Y E + +F+ + + N + YN ++ Y S G + + I
Sbjct: 190 TYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLI 249
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K+ + PDI +Y +++ + ++ ++ ++M +S + V Y L++ Y +A
Sbjct: 250 KKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNK-VSYNALIDAYGSAGM 308
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L A L E EK Q ++ L+ +I+ I ++ R + + Y
Sbjct: 309 LKEA-VGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYN 367
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 384
+ SYL G ++ E+ ++S D N L+ S +G
Sbjct: 368 SGIKSYLSFGDYEKALELYTSMRESNVKP-DAVTYNILISGSSKLG 412
>gi|225457536|ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial [Vitis vinifera]
gi|297745544|emb|CBI40709.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 110/246 (44%), Gaps = 20/246 (8%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY+ L+ YA A E A + + ++ S + N+ +++ ++ Y G+ +K V+ E+
Sbjct: 363 TYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREM 422
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ V PD YN+ I + +D D M + G D V + L++ + + H
Sbjct: 423 RNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRME-GVQPDAVTWNTLIDCHCKSGH 481
Query: 279 LVNAESSTLVEA-EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
AE L EA ++S TY+ +I G +++ W+ ++ KM S+
Sbjct: 482 HNKAEE--LFEAMQESGCSPCTTTYNIMI---NSFGEQER----WEDVKTLLGKMQSQGL 532
Query: 338 ICILSSYLML-------GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA- 389
+ + +Y L G K+ E ++ K + N L+ A++ GL+E+A
Sbjct: 533 LANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKP-SSTMYNALINAYAQRGLSEQAI 591
Query: 390 NEFHML 395
N F ++
Sbjct: 592 NAFRVM 597
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Query: 148 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 207
+G LS KT+ T A++ A TE+AE +FE +K+ L YN ++ Y+ G
Sbjct: 283 QGNGLSPKTA-TLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGS 341
Query: 208 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWV 264
++ +V E++R PD TY+L I + A + + L EM + +V
Sbjct: 342 LKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYV 398
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 90/239 (37%), Gaps = 7/239 (2%)
Query: 167 YAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPD 226
+A + +A V+ + LS ++T + G+ E+ + EE+K ++P
Sbjct: 266 FAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPR 325
Query: 227 IFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESST 286
YN + T ++ + + EM SG S D Y L++ Y A ES+
Sbjct: 326 TRAYNALLKGYVKTGSLKDAESIVSEME-RSGFSPDEHTYSLLIDAYANAGRW---ESAR 381
Query: 287 LVEAEKSITQRQWITYDFLIIL--YAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY 344
+V E + + +Y F IL Y G K Q+ + +R + Y ++ ++
Sbjct: 382 IVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTF 441
Query: 345 LMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
L D+ + D N L+ G KA E + + C+P
Sbjct: 442 GKCNCLDHALATFDRMRMEGVQP-DAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSP 499
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 95/233 (40%), Gaps = 12/233 (5%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNL-SFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
Y+ L+H ++E+L+E S + L YN ++ +EK ++ +
Sbjct: 157 YSILIHALG------RSEKLYEAFLLSQRQTLTPLTYNALIGACARNDDLEKALNLMSRM 210
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQ--VKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
+R D Y+ I S T D ++K E+ D D + +N + +
Sbjct: 211 RRDGFPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESDKIELDG--QLLNDIIVGFAK 268
Query: 277 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 336
S VN S L + + + T +I G ++ + I++ L+ +R
Sbjct: 269 SGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRA 328
Query: 337 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
Y +L Y+ G LK+ I+ + ++S S D + L+ A+++ G E A
Sbjct: 329 YNALLKGYVKTGSLKDAESIVSEMERSGFSP-DEHTYSLLIDAYANAGRWESA 380
Score = 38.1 bits (87), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
+S Y AL++ YA +E+A F ++ L + L+ N ++ + + + V
Sbjct: 569 PSSTMYNALINAYAQRGLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSV 628
Query: 215 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 262
++ +K ++ PD+ TY + + D+V +EM+ SG + D
Sbjct: 629 LQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAVYEEMTL-SGCTPD 675
>gi|302820146|ref|XP_002991741.1| hypothetical protein SELMODRAFT_448545 [Selaginella moellendorffii]
gi|300140422|gb|EFJ07145.1| hypothetical protein SELMODRAFT_448545 [Selaginella moellendorffii]
Length = 495
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 70/167 (41%), Gaps = 5/167 (2%)
Query: 65 ISLPKRSATNVIQRWVSEGNQATVSE-LRHILKELRKSQRYKHALEISEWMVTHKEFVLS 123
I+ P RS V+ W + E L + ++L QR+ +I W++ K +S
Sbjct: 69 IANPYRSPKAVVAEWQEQTKTKFTREMLFKLFRKLWGRQRHDQVYKIMRWVLVDKPLPVS 128
Query: 124 DSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERV 183
Y + K + +R F+ +P AKT YT ++ Y KAE + E
Sbjct: 129 SKIYELSMKAAQKANKLQVVKRIFDDMPAEAKTPAVYTRIMSAYCNKNRANKAEFILE-- 186
Query: 184 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 230
S A +N++M +Y+ + + EK +++ + P T+
Sbjct: 187 --SFTPTTAQAHNQLMLMYIRMEEDEKAVDAYNRMRKAGIKPSDLTF 231
>gi|302819136|ref|XP_002991239.1| hypothetical protein SELMODRAFT_448344 [Selaginella moellendorffii]
gi|300140950|gb|EFJ07667.1| hypothetical protein SELMODRAFT_448344 [Selaginella moellendorffii]
Length = 561
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 97/216 (44%), Gaps = 12/216 (5%)
Query: 153 SAKTSETYTALLHLYAGAKWTEKAEELFERVKQS---NLSFNALMYNEMMTLYMSVGQVE 209
+ T++TY ++ Y+ A + + +F+ V S + +A MYN M+ Y G+VE
Sbjct: 220 PSPTAQTYQTMMKSYSEAGRLDDVQRIFKLVTDSPSPTVKPDARMYNLMIHTYGKQGKVE 279
Query: 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
+ V + +KR+ V I T+N ++ + + V + L D D Y L
Sbjct: 280 QAMSVYQSMKRERVALTIVTFNSLLACQKTWKDAEDVFRKLQAAKLDP----DVFSYTAL 335
Query: 270 VNIYITA--SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 327
VN Y A + +A ++ A TQ + Y+ LI YA + + + K ++
Sbjct: 336 VNAYAKARRAECAHAAFDDMIAAGIRPTQ---VAYNALINAYAKCKDPEGARAVLKQMKQ 392
Query: 328 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 363
T +Y ++S+Y+ + + + + + + K++
Sbjct: 393 NGCTPTVESYTSLISAYVSVNLMAKAEQTVLRMKEA 428
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 1/119 (0%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
T Y AL++ YA K E A + +++KQ+ + Y +++ Y+SV + K
Sbjct: 362 PTQVAYNALINAYAKCKDPEGARAVLKQMKQNGCTPTVESYTSLISAYVSVNLMAKAEQT 421
Query: 215 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
V +K ++ P++ T+ + ++ A +D + + + M +G + Y LVN Y
Sbjct: 422 VLRMKEADLQPNLQTFCVLMTGYANGNKLDNMMRSFETMKL-AGLEPNRHVYTVLVNAY 479
>gi|356510655|ref|XP_003524052.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic-like [Glycine max]
Length = 712
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
+T TA++ +Y A+W+ A EL++R+K++ + ++YN ++ + VG VE+ + +
Sbjct: 365 KTLTAVIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRD 424
Query: 218 IKRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSG 258
+K+ + PD ++Y ++ + ++D+ K DEM C G
Sbjct: 425 MKQSVHCKPDSWSYTAMLNIYGSQGDVDKAMKLFDEM-CKLG 465
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 99/248 (39%), Gaps = 19/248 (7%)
Query: 149 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 208
G+PL + TY+ ++ +KA FER+ ++ L + + Y+ ++ +Y +G+V
Sbjct: 219 GVPLD---NITYSTIISCAKKCNLYDKAVHWFERMYKTGLMPDEVTYSAILDVYARLGKV 275
Query: 209 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268
E+V + E + PD T+++ + D ++ EM G + V Y
Sbjct: 276 EEVISLYERGRATGWKPDPITFSVLGKMFGEAGDYDGIRYVFQEME-SVGVQPNLVVYNT 334
Query: 269 LVNIYITASHLVNAES-------STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQI 321
L+ A A S +V EK++T +I +Y ++
Sbjct: 335 LLEAMGKAGKPGFARGLFEEMIESGIVPNEKTLTA--------VIKIYGKARWSRDALEL 386
Query: 322 WKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFS 381
W+ ++ M Y +L+ +G ++E + KQS D + +L +
Sbjct: 387 WQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSVHCKPDSWSYTAMLNIYG 446
Query: 382 DVGLTEKA 389
G +KA
Sbjct: 447 SQGDVDKA 454
>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 942
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 103/236 (43%), Gaps = 3/236 (1%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
+ + +L ++A T+ A +F+ + + + N +++ + G+ K LV
Sbjct: 185 SPTVFDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVY 244
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275
E++ ++PDIF+Y + +++ +D+ F+ EM S + V Y +L++ Y++
Sbjct: 245 EQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEME-RSCCEPNVVTYNSLIDGYVS 303
Query: 276 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
+ A+ + +EK I + TY LI Y G ++ +++ + +
Sbjct: 304 LGDVCGAKKVLALMSEKGIPENSR-TYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEH 362
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 391
Y ++ +Y G + + I D + + CN L+ + +G KA E
Sbjct: 363 VYGVLIHAYCTAGRVDDALRIRDAMLKVGLK-MNTVICNSLINGYCKLGHVNKAAE 417
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 72/166 (43%), Gaps = 2/166 (1%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
Y L+H Y A + A + + + + L N ++ N ++ Y +G V K A V+
Sbjct: 362 HVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVS 421
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
+K N+ PD + YN + + + K DEM + G + V Y L+
Sbjct: 422 MKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMH-NKGVNFTVVTYNTLLKNLFHVG 480
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 323
H+ +A + ++ + + +TY L+ + +G D+ IWK
Sbjct: 481 HVEHALHIWNLMHKRGVAPNE-VTYCTLLDAFFKVGTFDRAMMIWK 525
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 103/249 (41%), Gaps = 3/249 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+YT +++ Y ++A + +++S N + YN ++ Y+S+G V V+ +
Sbjct: 258 SYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALM 317
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K + + TY L I ++Q +K + M + D+ V Y L++ Y TA
Sbjct: 318 SEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHV-YGVLIHAYCTAGR 376
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ +A + + I + LI Y LG+ +K ++ S++ K S Y
Sbjct: 377 VDDALRIRDAMLKVGLKMNTVIC-NSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYN 435
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
+L + + ++ D+ +F + N LL VG E A L+ +
Sbjct: 436 TLLDGFCKQEDFIKAFKLCDEMHNKGV-NFTVVTYNTLLKNLFHVGHVEHALHIWNLMHK 494
Query: 399 KNCAPTNAS 407
+ AP +
Sbjct: 495 RGVAPNEVT 503
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 105/252 (41%), Gaps = 6/252 (2%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
T TYT ++ A+ T A +L + ++ S N YN ++ ++++ ++
Sbjct: 111 TVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKML 170
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275
EE+ + PD+ TYN +I +D+ +KFL M + D V Y ++N
Sbjct: 171 EEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPV----TPDVVSYTTVINGLCK 226
Query: 276 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
+ L ++ S L +TY LI + G ++ + S+ +
Sbjct: 227 SGDL-DSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMV 285
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 395
Y +L + LGH+ + +++ + ++ + D+ + N + +KA
Sbjct: 286 AYNSLLGALHRLGHIGKAEDMLVEMERRGFTP-DVVSYNACIDGLCKAERVKKAKAVFDR 344
Query: 396 LLQKNCAPTNAS 407
++++ C P +S
Sbjct: 345 MVERGCTPNASS 356
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 103/276 (37%), Gaps = 33/276 (11%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY LL +KA +F+ + + +A + ++ Q+EK ++ +
Sbjct: 9 TYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRM 68
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS------------------CDSGGS 260
K VPD YN IS + + Q KFL EM C + +
Sbjct: 69 KEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERT 128
Query: 261 DDWVKYVNLV-------NIYITASHLVNA--ESSTLVEAEKSITQRQWITYDFLIILY-- 309
D VK ++ + NIY T + +V E L EA+K + + Y ++ Y
Sbjct: 129 RDAVKLLDEMRDKGCSPNIY-TYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNS 187
Query: 310 --AGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSD 367
GL D++D+ K L +Y +++ G L ++D +
Sbjct: 188 FIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTP 247
Query: 368 FDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
D+ + L+ F G E+A +L+ C P
Sbjct: 248 -DVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRP 282
>gi|297802950|ref|XP_002869359.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315195|gb|EFH45618.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 906
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 4/124 (3%)
Query: 147 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 206
F+G +S E Y LL Y K EK + +R+K+S + YN M+ +Y G
Sbjct: 763 FDGFSVSL---EAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQG 819
Query: 207 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 266
+++VA V++E+K + PD+ +YN I + +++ + EM + D V Y
Sbjct: 820 WIDEVAGVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMR-GKNITPDKVTY 878
Query: 267 VNLV 270
NLV
Sbjct: 879 TNLV 882
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 46/244 (18%), Positives = 99/244 (40%), Gaps = 4/244 (1%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
+ +L +Y +K + L+ R+++S + ++ MYN ++ +++++ EE+
Sbjct: 634 FRDMLRIYQKCDLQDKLQHLYYRIQKSGIHWDQEMYNCVINCCARALPLDELSRTFEEMI 693
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
R P+ T+N+ + +V + + G D + Y ++ Y
Sbjct: 694 RYGFTPNTVTFNVLLDVYGKAKLFKKVNELF--LLAKRHGVVDVISYNTIIAAYGKNKDF 751
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 339
N SS + + Y+ L+ Y +K I K ++ + Y
Sbjct: 752 TNM-SSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNI 810
Query: 340 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 399
+++ Y G + EV ++ + K+S D+ + N L+ A+ G+ E+A + K
Sbjct: 811 MINIYGEQGWIDEVAGVLKELKESGLGP-DLCSYNTLIKAYGIGGMVEEAVGLVKEMRGK 869
Query: 400 NCAP 403
N P
Sbjct: 870 NITP 873
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 60/149 (40%), Gaps = 35/149 (23%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSN----LSFNALM-------------------- 194
T+ LL +Y AK +K ELF K+ +S+N ++
Sbjct: 703 TFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDFTNMSSAIKNMQ 762
Query: 195 ----------YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
YN ++ Y Q+EK +++ +K+ PD +TYN+ I+ ID
Sbjct: 763 FDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWID 822
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
+V L E+ +SG D Y L+ Y
Sbjct: 823 EVAGVLKELK-ESGLGPDLCSYNTLIKAY 850
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 50/112 (44%), Gaps = 1/112 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
Y++++ +Y + EKAEE+ +KQ + + M+ Y G++E+ V+ +
Sbjct: 283 AYSSMITIYTRLRLYEKAEEVINLMKQDRVRLKLENWLVMLNAYSQQGKMEQAESVLISM 342
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 270
+ P+I YN I+ ++ K +S D G D Y +++
Sbjct: 343 EAAGFAPNIIAYNTLITGYGKVSKMEAAKSLFHRLS-DIGLEPDETSYRSMI 393
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
+ TY++L+H + A+ L + +++ L N + Y ++ Y +GQ+ KV +V+
Sbjct: 675 SCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVL 734
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 266
+E+ N+ P+ FTY + I + K L+EM+ + G D V Y
Sbjct: 735 QEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMT-EKGILPDAVTY 784
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/232 (19%), Positives = 102/232 (43%), Gaps = 3/232 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T AL+H A ++ +L + + L F+ + YN +++ G+V++ + EE+
Sbjct: 503 TSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEM 562
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+K + PDI+T+NL + ID+ + E +G + Y +++ Y A+
Sbjct: 563 VKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECK-KNGYVPNVYTYGVMIDGYCKANK 621
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ E + L E + + Y+ LI Y GN + ++ ++ ++ Y
Sbjct: 622 VEEGE-NLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYS 680
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 390
++ +G + + ++D+ ++ ++ ++G +S +G K N
Sbjct: 681 SLMHGLCNIGLVDDAKHLLDEMRKEGLLP-NVVCYTTIIGGYSKLGQMNKVN 731
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
YT ++ Y+ K + + + N+ N Y M+ + +G+ ++ A ++ E+
Sbjct: 714 YTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMT 773
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG-SDDWVKYVNLVN 271
K ++PD TYN + + +++ K DEMS SG D + Y L++
Sbjct: 774 EKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMS--SGAVCLDEITYTTLID 824
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 61/155 (39%), Gaps = 2/155 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY ++ Y A E+ E L + L N+++YN ++ Y G + + +++
Sbjct: 608 TYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDM 667
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K + V+ TY+ + +D K LDEM G + V Y ++ Y
Sbjct: 668 KSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMR-KEGLLPNVVCYTTIIGGYSKLGQ 726
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 313
+ N + L E TY +I + LG
Sbjct: 727 M-NKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLG 760
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/123 (20%), Positives = 61/123 (49%), Gaps = 1/123 (0%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
++ +++ + + A LF ++++ ++ N + YN ++ G++++ E++
Sbjct: 259 FSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMV 318
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
++ V P + TY+++I+ ID+ L EMS + G + V Y L++ Y ++
Sbjct: 319 KEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMS-ELGFVPNEVVYNTLIDGYCKMGNI 377
Query: 280 VNA 282
A
Sbjct: 378 SEA 380
>gi|357132372|ref|XP_003567804.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Brachypodium distachyon]
Length = 851
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 86/189 (45%), Gaps = 5/189 (2%)
Query: 70 RSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYAT 129
R A V++R + +G + + +LK + + +H +E+ + + H ++ D+ T
Sbjct: 289 REALAVLRRMLEQGLWPDATTVSSLLKSVANAGMVRHGMEVHCFFLRHG--LVPDAYTGT 346
Query: 130 R-IDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNL 188
+D+ K + R F+ L + T+ +L+ +A A E A EL ER+K++ L
Sbjct: 347 ALVDMYAKCGRLDCARRVFD--TLEHRNLATWNSLVAGHAYAGQFEAALELVERMKRNRL 404
Query: 189 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 248
N +N ++T Y G + L++ +IK + P++ ++ IS +
Sbjct: 405 DPNVTTWNGLITGYSLNGLSSQAMLLLRQIKAAGLTPNVVSWTSLISGSCHNGEYEDSFN 464
Query: 249 FLDEMSCDS 257
F EM D
Sbjct: 465 FFKEMQKDG 473
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 81/184 (44%), Gaps = 9/184 (4%)
Query: 161 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 220
TAL+ +Y+ A A+ +F R++ NL + N M+T GQ + + ++ R
Sbjct: 517 TALIDMYSKAGSLTSAKRIFGRIQNKNL----VCCNAMLTGLAVHGQSHEAITLFHDLWR 572
Query: 221 KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLV 280
+ PD T+ +++C + I + ++ D M G Y +V++ + +L
Sbjct: 573 SGLKPDSITFTALLTACRSMGLITEGWEYFDNMETKYGVVPTAENYACMVDLLARSGYL- 631
Query: 281 NAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICI 340
E+ L+ E+S + L+ + GN D + ++L + S NY+ I
Sbjct: 632 -DEAMALI--ERSPVDPGASLWGALLTGCSIHGNLDLAEVAARNL-FRLEPYNSANYLMI 687
Query: 341 LSSY 344
+S Y
Sbjct: 688 MSLY 691
>gi|58013026|gb|AAW62966.1| chloroplast embryo-defective 1270 [Arabidopsis thaliana]
Length = 1429
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/328 (19%), Positives = 137/328 (41%), Gaps = 16/328 (4%)
Query: 85 QATVSELRHILKELRKSQRYKHALEISEWM-VTHKEFVLSDSDYATRIDLMTKVFGIHSG 143
Q T ++ ++K + + + ++ ALE+ EW+ + H S A + + V G +
Sbjct: 153 QMTPTDYCFVVKSVGQ-ESWQRALEVFEWLNLRHWH-----SPNARMVAAILGVLGRWNQ 206
Query: 144 ER-----YFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEM 198
E + P + Y A++ +Y+ + KA+EL + ++Q + + +N +
Sbjct: 207 ESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTL 266
Query: 199 MTLYM-SVGQVEKVAL-VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCD 256
+ + S G +A+ +++ ++ + PD TYN +S+C+ N+D K ++M
Sbjct: 267 INARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAH 326
Query: 257 SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKD 316
D W Y ++++Y AE +E E +TY+ L+ +A N +
Sbjct: 327 RCQPDLWT-YNAMISVYGRCGLAAEAE-RLFMELELKGFFPDAVTYNSLLYAFARERNTE 384
Query: 317 KIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRL 376
K+ ++++ ++ Y I+ Y G L ++ K + + D L
Sbjct: 385 KVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVL 444
Query: 377 LGAFSDVGLTEKANEFHMLLLQKNCAPT 404
+ + T +A +L PT
Sbjct: 445 IDSLGKANRTVEAAALMSEMLDVGIKPT 472
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 79/187 (42%), Gaps = 1/187 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY A++ +Y +AE LF ++ +A+ YN ++ + EKV V +++
Sbjct: 334 TYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQM 393
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
++ D TYN I +D + +M SG + D + Y L++ A+
Sbjct: 394 QKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANR 453
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
V A ++ + E + TY LI YA G +++ + + + + K + Y
Sbjct: 454 TVEA-AALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYS 512
Query: 339 CILSSYL 345
+L L
Sbjct: 513 VMLDVLL 519
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/186 (19%), Positives = 92/186 (49%), Gaps = 2/186 (1%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
+ ++L +Y + +K ++++R+K++ L + YN ++ +Y + E+ L++++++
Sbjct: 930 WNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMR 989
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
+ P + TY IS+ ++Q ++ +E+ G D Y ++ I +
Sbjct: 990 NLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEEL-LSKGLKLDRSFYHTMMKISRDSGSD 1048
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 339
AE L + + + T L++ Y+ GN + +++ +L+ T+ ++T+ Y
Sbjct: 1049 SKAE-KLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSS 1107
Query: 340 ILSSYL 345
++ +YL
Sbjct: 1108 VIDAYL 1113
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
+TY +L+ + K E+AE+LFE + L + Y+ MM + G K +++
Sbjct: 998 DTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQM 1057
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274
+K + P + T +L + S +++ N + +K L + D+ + Y ++++ Y+
Sbjct: 1058 MKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLK-DTEVELTTLPYSSVIDAYL 1113
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 99/244 (40%), Gaps = 8/244 (3%)
Query: 165 HLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVV 224
L +G A EL + V+ S L +A+ YN +++ ++ V E+++
Sbjct: 270 RLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQ 329
Query: 225 PDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES 284
PD++TYN IS + ++ E+ G D V Y +L+ + N E
Sbjct: 330 PDLWTYNAMISVYGRCGLAAEAERLFMELEL-KGFFPDAVTYNSLLYAFARER---NTEK 385
Query: 285 STLV--EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR-MTKQKMTSRNYICIL 341
V + +K + +TY+ +I +Y G D Q++K ++ ++ + + Y ++
Sbjct: 386 VKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLI 445
Query: 342 SSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 401
S E ++ + + + L+ ++ G E+A + +L+
Sbjct: 446 DSLGKANRTVEAAALMSEMLDVGIKP-TLQTYSALICGYAKAGKREEAEDTFSCMLRSGT 504
Query: 402 APTN 405
P N
Sbjct: 505 KPDN 508
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 67/167 (40%), Gaps = 6/167 (3%)
Query: 70 RSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYAT 129
R+ N + R +G TV + +L L R + + E + F +S S
Sbjct: 807 RAIFNTMMR---DGPSPTVESINILLHALCVDGRLEELYVVVEEL-QDMGFKISKSSILL 862
Query: 130 RIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQSN 187
+D + I ++ + + + T Y ++ L K AE + ++++N
Sbjct: 863 MLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEAN 922
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 234
++N M+ +Y ++ +K V + IK + PD TYN I
Sbjct: 923 FKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLI 969
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/296 (19%), Positives = 128/296 (43%), Gaps = 7/296 (2%)
Query: 112 EWMVTHKEFVLSDSD--YATRIDLMTKVFGIHSG-ERYFEGLPLSAKTSE-TYTALLHLY 167
+ +V +EF S + Y T ID K I + +FE +E TYT L+H
Sbjct: 184 DLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGL 243
Query: 168 AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 227
++ E++E++++ + N YN +M + G+ + + +E++ + V +I
Sbjct: 244 FKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNI 303
Query: 228 FTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTL 287
TYN I + ++ K +D+M D G + + + Y L++ + L A S
Sbjct: 304 VTYNTLIGGLCREMKANEANKVMDQMKSD-GINPNLITYNTLIDGFCGVGKLGKALSLCR 362
Query: 288 VEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 347
+ ++ +TY+ L+ + G+ ++ K + K + Y ++ ++ +
Sbjct: 363 DLKSRGLSP-SLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARM 421
Query: 348 GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
++++ ++ ++ + D+ + L+ F G +A+ L++ K P
Sbjct: 422 DNMEKAIQLRSPMEELGLTP-DVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEP 476
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 38/194 (19%), Positives = 85/194 (43%), Gaps = 7/194 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+ +A ++ +++K ++ N + YN ++ + VG++ K + ++
Sbjct: 305 TYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDL 364
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K + + P + TYN+ +S + K + EM + G + Y L++ + +
Sbjct: 365 KSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEME-ERGIKPSKITYTILIDTFARMDN 423
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ A E +T TY LI + G ++ +++K M +K+
Sbjct: 424 MEKAIQLRSPMEELGLTPDVH-TYSVLIHGFCIKGQMNEASRLFK--LMVAKKLEPNK-- 478
Query: 339 CILSSYLMLGHLKE 352
++ + ++LG+ KE
Sbjct: 479 -VIYNTMVLGYCKE 491
Score = 38.1 bits (87), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 4/109 (3%)
Query: 126 DYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQ 185
D R+D M K + S E L L+ TY+ L+H + +A LF+ +
Sbjct: 416 DTFARMDNMEKAIQLRSP---MEELGLTPDV-HTYSVLIHGFCIKGQMNEASRLFKLMVA 471
Query: 186 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 234
L N ++YN M+ Y G + + E++ K + P++ +Y I
Sbjct: 472 KKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMI 520
>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 102/220 (46%), Gaps = 18/220 (8%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
T T+ +++ + +A +LF+ +K+ S NA+MYN +M Y+ + ++++ ++
Sbjct: 124 PTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANML 183
Query: 215 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274
EE+++K + PD T+N+ +S + + L ++S D +L +I +
Sbjct: 184 YEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDR-----SLFDISV 238
Query: 275 T----ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 330
+ A L A + EK ++ I ++ +I Y+ G +DK + +K M
Sbjct: 239 SGLCWAGRLDEAMEFLMDMLEKGLSP-SIIAFNSVIAAYSQAGLEDKAFEAYK--LMVHF 295
Query: 331 KMTSRNYICILSSYLML----GHLKEVGEIIDQWKQSATS 366
+T C SS LM G L+E E+I Q + S
Sbjct: 296 GLTPSPSTC--SSLLMGLSINGRLQEATELIGQMIEKGLS 333
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
++A + + E+A +F + + L N YN ++ + G++ + AL +E++
Sbjct: 373 AFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNE-ALKLEKV 431
Query: 219 KR-KNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
R + ++PDIFT N+ I C + F+D +G S D + Y L+N Y A
Sbjct: 432 MRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMH--QTGLSPDIITYNTLINGYCKA 489
Query: 277 SHLVNAES 284
+VNA++
Sbjct: 490 FDMVNADN 497
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 47/249 (18%), Positives = 100/249 (40%), Gaps = 3/249 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T++ ++ + E L + + + NA YN ++ G+ +
Sbjct: 58 TFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLM 117
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ P + T+N I++ N+ + +K D + + G S + + Y L+N Y+
Sbjct: 118 IERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLK-EMGFSPNAIMYNTLMNGYVKMRE 176
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
++ + E K IT++ L+ + G ++ D++ K + + +
Sbjct: 177 -IDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFD 235
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
+S G L E E + + S I A N ++ A+S GL +KA E + L++
Sbjct: 236 ISVSGLCWAGRLDEAMEFLMDMLEKGLSP-SIIAFNSVIAAYSQAGLEDKAFEAYKLMVH 294
Query: 399 KNCAPTNAS 407
P+ ++
Sbjct: 295 FGLTPSPST 303
>gi|115466932|ref|NP_001057065.1| Os06g0199100 [Oryza sativa Japonica Group]
gi|51091829|dbj|BAD36643.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113595105|dbj|BAF18979.1| Os06g0199100 [Oryza sativa Japonica Group]
Length = 1283
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 79/186 (42%), Gaps = 2/186 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY A++ ++ ++AE +F+ + + +A+ YN ++ + G VE+V V EE+
Sbjct: 170 TYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEEL 229
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ D TYN I +D DEM G + D V Y LV+
Sbjct: 230 VKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRA-IGCTPDAVTYTVLVDSLGKMDR 288
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ A L E + + +T+ LI YA G +D ++ + + + K Y+
Sbjct: 289 ISEA-GKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYL 347
Query: 339 CILSSY 344
+L +
Sbjct: 348 VMLDVF 353
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 80/184 (43%), Gaps = 2/184 (1%)
Query: 176 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
A EL V+Q+ L +A+ YN +++ ++ V EE+ PD++TYN +S
Sbjct: 117 ALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVS 176
Query: 236 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 295
+ + E+ + G D V Y +L+ + + E E K+
Sbjct: 177 VHGRCGKAQEAELMFKEL-VEKGFQPDAVTYNSLLYAFAKEGDVERVE-RVCEELVKAGF 234
Query: 296 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 355
++ ITY+ +I +Y +G D ++ +R + Y ++ S + + E G+
Sbjct: 235 RKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGK 294
Query: 356 IIDQ 359
++++
Sbjct: 295 VLEE 298
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 78/168 (46%), Gaps = 7/168 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+ + + A +FE + S + YN M++++ G+ ++ L+ +E+
Sbjct: 135 TYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKEL 194
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K PD TYN + + A ++++V++ +E+ +G D + Y ++++Y
Sbjct: 195 VEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEEL-VKAGFRKDGITYNTMIHMYGKMGR 253
Query: 279 LVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSL 325
L A L + ++I +TY L+ LG D+I + K L
Sbjct: 254 LDLALG--LYDEMRAIGCTPDAVTYTVLV---DSLGKMDRISEAGKVL 296
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 48/96 (50%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
E+Y LL AK E+A+ LFE ++ N +Y+ MM +Y + K ++
Sbjct: 833 ESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSA 892
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
+K + P I T ++ ++S + + D+ +K L+ +
Sbjct: 893 MKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSL 928
Score = 41.2 bits (95), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 36/183 (19%), Positives = 83/183 (45%), Gaps = 2/183 (1%)
Query: 163 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 222
LL +Y G ++ E++ + ++ L + YN ++ +Y + E+ ++ E+ ++
Sbjct: 768 LLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRG 827
Query: 223 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 282
+ P + +Y + +++ +Q +EM G + Y ++ IY A + A
Sbjct: 828 LTPKLESYKILLAASGKAKLWEQADLLFEEMRT-KGYRLNRSIYHMMMKIYRNARNHSKA 886
Query: 283 ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILS 342
E E I + T L+ Y G+ D+ +++ SL+ + ++++ Y +L
Sbjct: 887 EHLLSAMKEDGI-EPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLD 945
Query: 343 SYL 345
+YL
Sbjct: 946 AYL 948
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/168 (19%), Positives = 79/168 (47%), Gaps = 7/168 (4%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
K TY ++H+Y + A L++ ++ + +A+ Y ++ + ++ + V
Sbjct: 236 KDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKV 295
Query: 215 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274
+EE+ + P + T++ I + A + D ++ D M +SG D + Y+ +++++
Sbjct: 296 LEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRM-VESGVKPDRLAYLVMLDVFA 354
Query: 275 TASHLVNAESSTLVEAEKSITQRQWITYDFLI-ILYAGLGNKDKIDQI 321
+ E+ L+ +++ + + D L +L A L ++ D+I
Sbjct: 355 RSD-----ETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEI 397
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 126/300 (42%), Gaps = 18/300 (6%)
Query: 111 SEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYA 168
S + + K V+S Y+ ID + K FE + + T +YT+L+H +
Sbjct: 232 SLYGINFKPVVIS---YSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFC 288
Query: 169 -GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 227
G KW E+A+ LF + + N + +N ++ + G+V + ++E + ++ +VP++
Sbjct: 289 CGGKW-EEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNL 347
Query: 228 FTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTL 287
TYN I +++ ++ M G D + Y L+N Y S + E+ L
Sbjct: 348 LTYNSLIEGFCLVGDLNSARELFVSMP-SKGCEPDVICYTVLINGYCKTSKV--EEAMKL 404
Query: 288 VEAEKSITQRQWI-TYDFLII-LYAG--LGNKDKIDQIWKSLRMTKQKMTSRNYICILSS 343
+ +R + TY L+ L+ G +G+ K+ + K + Y L+
Sbjct: 405 YNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYI---YGIFLNG 461
Query: 344 YLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
G L E E+ ++ K S DI N L+ G E A E L Q+ P
Sbjct: 462 LCKNGCLFEAMELFNKLK-SYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQP 520
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
E + L+ A E A ELFE++ Q L + + YN M+ + GQV K ++ ++
Sbjct: 488 ECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQK 547
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
+++ PD TY I + +++V + L M
Sbjct: 548 MEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMM 583
>gi|7413543|emb|CAB86023.1| putative protein [Arabidopsis thaliana]
Length = 880
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 102/244 (41%), Gaps = 24/244 (9%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y +++ + E+AE L +++ + +Y+ MM Y V +K +V + +K
Sbjct: 417 YGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLK 476
Query: 220 RKNVVPDIFTY----NLW--ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
P + TY NL+ + + L + +V K + G + Y ++N +
Sbjct: 477 ECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMK-------EEGVKHNLKTYSMMINGF 529
Query: 274 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
+ NA + + K + I Y+ +I + G+GN D+ Q K ++ + + T
Sbjct: 530 VKLKDWANA-FAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPT 588
Query: 334 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDV--GLTEKANE 391
+R ++ I+ Y G ++ E+ D ++ C + F+ + GL EK
Sbjct: 589 TRTFMPIIHGYAKSGDMRRSLEVFDMMRR--------CGCVPTVHTFNGLINGLVEKRQA 640
Query: 392 FHML 395
+L
Sbjct: 641 VEIL 644
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 81/194 (41%), Gaps = 2/194 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT ++ YA T KA E F R++ L + Y ++ G+++ V +E+
Sbjct: 658 TYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEM 717
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+N+ + F YN+ I A ++ + + +M G D Y + ++ A
Sbjct: 718 SARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMK-KEGVKPDIHTYTSFISACSKAGD 776
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ N + T+ E E + TY LI +A +K ++ ++ K Y
Sbjct: 777 M-NRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYH 835
Query: 339 CILSSYLMLGHLKE 352
C+L+S L + E
Sbjct: 836 CLLTSLLSRASIAE 849
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L++LY KA E+ +K+ + N Y+ M+ ++ + V E++
Sbjct: 486 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM 545
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
++ + PD+ YN IS+ N+D+ + + EM
Sbjct: 546 VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEM 580
>gi|357111163|ref|XP_003557384.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Brachypodium distachyon]
Length = 821
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 101/226 (44%), Gaps = 3/226 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+YT LL+ Y + EKA E F+ +++++ N + YN ++ Y S G ++ ++ E+
Sbjct: 404 SYTTLLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEM 463
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
++ + PD+ + + +++C I ++ L E + G + V Y + + Y+
Sbjct: 464 EKDGIPPDVVSISTLLTACGRCRQITKIDTIL-EAAKSRGIKLNIVCYNSGIGSYLNFGD 522
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
A V ++ +TY+ LI +G + + ++ + + +T Y
Sbjct: 523 YGKALELYAVMMASNVNPDA-VTYNILISGLCKVGKYAESLKFFEDMVDLRIPLTKEVYS 581
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 384
++ SY+ G L E K+S D+ ++ A++D G
Sbjct: 582 SLICSYVKQGKLTEAESTFSSMKESGCLP-DVLTYTAMIEAYNDDG 626
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/319 (18%), Positives = 127/319 (39%), Gaps = 17/319 (5%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGER-YFEGLPL 152
+++E+ + +HA+ + WM + + + Y I L + I +FE
Sbjct: 125 LIREITFAGSLQHAVHVFRWMKNQENYCARNDIYGMMIRLHARHSQIDQARGLFFEMQEW 184
Query: 153 SAKT-SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 211
K ++ Y +L+H +A A A + + + ++ + + YN ++ + G +K
Sbjct: 185 RCKPDADIYNSLIHAHARAGQWRWAINIMDDMLRAAIPPSRTTYNNVINACGAAGNWKKA 244
Query: 212 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV- 270
+ +++ R V PD+ T+N+ +S+ + + + M + D + +N+V
Sbjct: 245 LELCKKMTRNGVGPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKGANIAPDTFT--LNIVI 302
Query: 271 ------NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS 324
Y A L+N+ + + +TY ++ Y G + ++
Sbjct: 303 HCLVKDGQYGEAIELLNSMREKRTQCPPDV-----VTYTSIMHSYYVCGKVEDCKAVFDM 357
Query: 325 LRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 384
+ K +Y +L +Y G + I KQ+ D+ + LL A+ G
Sbjct: 358 MVAEGVKPNIVSYNALLGAYASRGMHADALGIFKLLKQNGLRP-DVVSYTTLLNAYGRSG 416
Query: 385 LTEKANEFHMLLLQKNCAP 403
EKA E + + +C P
Sbjct: 417 QPEKAREAFKEMRKNSCRP 435
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 82/195 (42%), Gaps = 4/195 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y ALL YA A +F+ +KQ+ L + + Y ++ Y GQ EK +E+
Sbjct: 369 SYNALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKAREAFKEM 428
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
++ + P+I +YN I + + + L EM D G D V L+
Sbjct: 429 RKNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEMEKD-GIPPDVVSISTLLTACGRCRQ 487
Query: 279 LVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
+ + T++EA KS + + Y+ I Y G+ K +++ + + + Y
Sbjct: 488 ITKID--TILEAAKSRGIKLNIVCYNSGIGSYLNFGDYGKALELYAVMMASNVNPDAVTY 545
Query: 338 ICILSSYLMLGHLKE 352
++S +G E
Sbjct: 546 NILISGLCKVGKYAE 560
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 96/231 (41%), Gaps = 13/231 (5%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT+++H Y E + +F+ + + N + YN ++ Y S G + + +
Sbjct: 334 TYTSIMHSYYVCGKVEDCKAVFDMMVAEGVKPNIVSYNALLGAYASRGMHADALGIFKLL 393
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K+ + PD+ +Y +++ + ++ ++ EM +S + V Y L++ Y +A
Sbjct: 394 KQNGLRPDVVSYTTLLNAYGRSGQPEKAREAFKEMRKNS-CRPNIVSYNALIDAYGSAGM 452
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
A S L E EK ++ L+ KID I L K + N +
Sbjct: 453 FKEA-ISLLHEMEKDGIPPDVVSISTLLTACGRCRQITKIDTI---LEAAKSRGIKLNIV 508
Query: 339 CI---LSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC--NRLLGAFSDVG 384
C + SYL G + G+ ++ + S+ + A N L+ VG
Sbjct: 509 CYNSGIGSYLNFG---DYGKALELYAVMMASNVNPDAVTYNILISGLCKVG 556
>gi|449465242|ref|XP_004150337.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Cucumis sativus]
Length = 690
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 8/175 (4%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
+ Y ++L T +A EL +V + +S + +MYN +++ + QV + + E+
Sbjct: 447 DAYISMLESLCRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEK 506
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
+K+ PDIFTYN+ ISS + + + +E+ S D + Y +L+N
Sbjct: 507 MKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELE-SSDCKPDIISYNSLINCLGKNG 565
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL--RMTKQ 330
+ A L +K + +TY LI + G DK+ ++ +SL RM Q
Sbjct: 566 DVDEAHMRFLEMQDKGLNP-DVVTYSTLIECF---GKTDKV-EMARSLFDRMITQ 615
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 107/256 (41%), Gaps = 28/256 (10%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT ++ + E++ LFE + + N + YN M+ G V+K L+ +
Sbjct: 311 TYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMIQALSKSGMVDKAILLFCNM 370
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ N P+ FTY++ ++ A + ++ + L+ + K++N +IY ++
Sbjct: 371 IKNNCRPNEFTYSIILNVLVAEGQLGRLDEVLEVSN----------KFIN-KSIY---AY 416
Query: 279 LVNAESSTLVEAE-KSITQRQWITY-----DFLIILYAGLGNKDKIDQIWKSLRMTKQKM 332
LV S +E + W + D I + L K + + L +K
Sbjct: 417 LVRTLSKLGHSSEAHRLFCNMWSFHDGGDRDAYISMLESLCRGGKTVEAIELLSKVHEKG 476
Query: 333 TSRN---YICILSSYLMLGHLKEVGEIIDQW-KQSATSDF-DISACNRLLGAFSDVGLTE 387
S + Y +LS+ LG LK+V + D + K F DI N L+ + VG +
Sbjct: 477 ISTDTMMYNTVLST---LGKLKQVSHLHDLYEKMKQDGPFPDIFTYNILISSLGRVGKVK 533
Query: 388 KANEFHMLLLQKNCAP 403
+A E L +C P
Sbjct: 534 EAVEVFEELESSDCKP 549
>gi|224118166|ref|XP_002317747.1| predicted protein [Populus trichocarpa]
gi|222858420|gb|EEE95967.1| predicted protein [Populus trichocarpa]
Length = 498
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 111/257 (43%), Gaps = 17/257 (6%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQS-NLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
+ + +++ Y A A + F R+K+ ++ + + N ++ +++ + V ++
Sbjct: 87 DVFISVIRNYGLAGRPRLALKTFTRIKEEFSMQPSVKLLNTLLNVFVQNKRYHLVGSTLK 146
Query: 217 EIKRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275
K K V+P++F++N+ I + +++ K DEM G + V Y ++ +++
Sbjct: 147 NCKDKYGVLPNVFSFNILIKALCKKNDVENALKVFDEMP-TMGMIPNLVTYTTILGGFVS 205
Query: 276 ASHLVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 331
LVNAE + I+ + W+ TY L++ Y G ++ ++ +
Sbjct: 206 RGDLVNAE-----KVFSEISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVE 260
Query: 332 MTSRNYICILSSYLMLGHLKEVGEIIDQW--KQSATSDFDISACNRLLGAFSDVGLTEKA 389
Y ++ +Y E +ID K+ S + C +++ + G E A
Sbjct: 261 PNEVTYGVMIDAYCKEKKSGEARNLIDDMLDKKFLPSS---TLCCKVIDVLCEDGKVENA 317
Query: 390 NEFHMLLLQKNCAPTNA 406
+L+KNC P NA
Sbjct: 318 CHLWKRMLEKNCLPDNA 334
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 125/272 (45%), Gaps = 23/272 (8%)
Query: 63 FRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMV--THKEF 120
F++SL A +V+ + + G + + ++ + R A+ + + MV ++
Sbjct: 134 FQVSL----ALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPD 189
Query: 121 VLSDSDYATRIDLMTKVFGIHSGERYFE--GLPLSAKTSETYTALLH-LYAGAKWTEKAE 177
+++ Y ID + K ++ +F+ G TYTAL++ L +W + A
Sbjct: 190 IVA---YNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAAR 246
Query: 178 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 237
L + +K+ ++ N + Y+ ++ ++ G+V + + EE+ R ++ PDI TY+ I+
Sbjct: 247 LLRDMIKRK-ITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGL 305
Query: 238 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 297
ID+ + D M G D V Y L+N + A + + ++ + ++QR
Sbjct: 306 CLHDRIDEANQMFDLMV-SKGCFPDVVSYNTLINGFCKAKRVEDG-----MKLFRKMSQR 359
Query: 298 QW----ITYDFLIILYAGLGNKDKIDQIWKSL 325
+TY+ LI + +G+ DK + + +
Sbjct: 360 GLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQM 391
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 80/187 (42%), Gaps = 32/187 (17%)
Query: 60 SRIFRISLPKRSATNVI------QRWVSEGNQATVSELRHILKELRKSQRYKHALEISEW 113
+R+ R + ++ NVI +V G V E + I +E+ + + I
Sbjct: 245 ARLLRDMIKRKITPNVITYSALLDAFVKNGK---VLEAKEIFEEMVR-------MSIDPD 294
Query: 114 MVTHKEFV----LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAG 169
+VT+ + L D RID ++F + + F + +Y L++ +
Sbjct: 295 IVTYSSLINGLCLHD-----RIDEANQMFDLMVSKGCFPDV-------VSYNTLINGFCK 342
Query: 170 AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFT 229
AK E +LF ++ Q L N + YN ++ + VG V+K ++ V PDI+T
Sbjct: 343 AKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWT 402
Query: 230 YNLWISS 236
YN+ +
Sbjct: 403 YNILLGG 409
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 94/236 (39%), Gaps = 15/236 (6%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y A++ + A + F+ + + + N + Y ++ + G+ A ++ ++
Sbjct: 193 YNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMI 252
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE---MSCDSGGSDDWVKYVNLVNIYITA 276
++ + P++ TY+ + + + + K+ +E MS D D V Y +L+N
Sbjct: 253 KRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDP----DIVTYSSLINGLCLH 308
Query: 277 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 336
+ A + K ++Y+ LI G +++ K R Q+ N
Sbjct: 309 DRIDEANQMFDLMVSKGCFP-DVVSYNTLI---NGFCKAKRVEDGMKLFRKMSQRGLVNN 364
Query: 337 ---YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
Y ++ + +G + + E Q S DI N LLG D GL EKA
Sbjct: 365 TVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSP-DIWTYNILLGGLCDNGLLEKA 419
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
+TY+ L+H + +A +F +++ L NA YN +++ G V+K + ++EE
Sbjct: 592 QTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEE 651
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
+ K + PDI TYN+ I I++ K D++ G + + V Y +V+ Y
Sbjct: 652 MCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIE-GRGLTPNCVTYAAMVDGY 706
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 11/205 (5%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+ A E+A+ LF+ ++ L+ N + Y M+ Y ++EE+
Sbjct: 663 TYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEM 722
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ V PD F YN+ ++ C ++ EM G V + L+ Y +
Sbjct: 723 LLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEML--EKGFASTVSFNTLIEGYCKSGK 780
Query: 279 LVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 334
L E++ L+E + ++Q+I TY LI G + ++W ++ T+
Sbjct: 781 L--QEANHLLE---EMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTA 835
Query: 335 RNYICILSSYLMLGHLKEVGEIIDQ 359
+ Y +L Y +G++ EV + ++
Sbjct: 836 KTYTSLLHGYHNIGNMSEVSALFEE 860
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
A T TY+ +++ + + + + L NA++Y +MT + G+VE+ +
Sbjct: 413 APTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRM 472
Query: 214 VVEEIKRKNVVPDIFTYN-LWISSCAATLNIDQVKKFLDEM 253
++E ++ + ++PD+F YN L I C A +++ + +L EM
Sbjct: 473 ILERMREQGILPDVFCYNSLIIGFCKAK-RMEEARTYLMEM 512
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 68/338 (20%), Positives = 130/338 (38%), Gaps = 53/338 (15%)
Query: 73 TNVIQRWVSEGNQATVSELRHILKEL-RKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
TN+I GN V + + +L E+ K++ A+E+ MV K V Y
Sbjct: 228 TNMISAHCKVGN---VKDAKRVLLEMGEKARLLDEAIELKRSMV-DKGLVPDLYTY---- 279
Query: 132 DLMTKVFGIHSGER-----YFEGLPLSAKTSE-TYTALLHLYAGAKWTEKAEELFERVKQ 185
D++ F + R E + + K TY AL+ + E+A + + +
Sbjct: 280 DILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVA 339
Query: 186 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 245
+ N +++N ++ G++EK +++E+ K V PD TY+L I N+ +
Sbjct: 340 CGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMAR 399
Query: 246 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFL 305
+ LDEM +K +TY +
Sbjct: 400 AFELLDEM-------------------------------------KKRKLAPTVLTYSVI 422
Query: 306 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 365
I GN + I + + M K + Y +++++ G ++E I+++ ++
Sbjct: 423 INGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGI 482
Query: 366 SDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
D+ N L+ F E+A + M +L++ P
Sbjct: 483 LP-DVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRP 519
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 72/161 (44%), Gaps = 5/161 (3%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSET---YTALLHLYAGAKWTEKAEELFERV 183
Y ID +K + +RYF + LS YTAL+ + +A +F +
Sbjct: 524 YGAFIDGYSKAGEMEIADRYFNEM-LSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFI 582
Query: 184 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 243
+ + Y+ ++ G++ + + E++ K ++P+ FTYN IS N+
Sbjct: 583 LSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNV 642
Query: 244 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES 284
D+ + L+EM C G + D V Y L++ A + A++
Sbjct: 643 DKASQLLEEM-CIKGINPDIVTYNILIDGLCKAGEIERAKN 682
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 84/185 (45%), Gaps = 9/185 (4%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
A ++ Q + +G +TVS +++ KS + + A + E M+ K+F+ + Y + I
Sbjct: 750 ALDLFQEMLEKGFASTVS-FNTLIEGYCKSGKLQEANHLLEEMI-EKQFIPNHVTYTSLI 807
Query: 132 DLMTKVFGIHSGERYFEGLPLSAK----TSETYTALLHLYAGAKWTEKAEELFERVKQSN 187
D K + +R + L + + T++TYT+LLH Y + LFE +
Sbjct: 808 DHNCKAGMMGEAKRLW--LEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKG 865
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 247
+ + + Y M+ Y G V + + +EI K +P + L + +C+ Q+
Sbjct: 866 IEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKG-MPMKSGFRLGLPTCSVIARGFQIA 924
Query: 248 KFLDE 252
+DE
Sbjct: 925 GNMDE 929
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 49/95 (51%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT+L+ A +A+ L+ +++ N+ A Y ++ Y ++G + +V+ + EE+
Sbjct: 802 TYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEM 861
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
K + PD TY + I + N+ + K DE+
Sbjct: 862 VAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEI 896
>gi|302786806|ref|XP_002975174.1| hypothetical protein SELMODRAFT_10825 [Selaginella moellendorffii]
gi|300157333|gb|EFJ23959.1| hypothetical protein SELMODRAFT_10825 [Selaginella moellendorffii]
Length = 555
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 94/211 (44%), Gaps = 10/211 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY+A++ LY A T +A +L++ ++++N + + + + +Y VG + + + ++
Sbjct: 101 TYSAMIDLYGKAGRTAEAMDLYQTMRKNNWKPDLVSFGVIANVYSRVGDYQAILRLFRDM 160
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
++ + P++ +N I + + K DEM+ G + L+++Y
Sbjct: 161 EQAEIKPNVVLFNTLIGTLGRAGKVTLAKGMFDEMA-SYGLEPSEITLSILIDMYTKVGA 219
Query: 279 LVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 334
L A ++ +I Q++W + Y+ L+ GN + + + + KQ
Sbjct: 220 LDKA-----LDVYDTIKQKKWKLDVLVYNTLLKSCVESGNIQRAESLIAEMEREKQWPDH 274
Query: 335 RNYICILSSYLMLGHLKEVGEIIDQWKQSAT 365
Y +++ Y G + EV + D+ K A
Sbjct: 275 MTYGILMNVYATKGMVAEVRAMFDKLKNLAV 305
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 38/199 (19%), Positives = 86/199 (43%), Gaps = 8/199 (4%)
Query: 173 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 232
E A F R++++ +SF+ + Y+ M+ LY G+ + + + +++ N PD+ ++ +
Sbjct: 80 AEDAIAWFHRLRETGVSFDGVTYSAMIDLYGKAGRTAEAMDLYQTMRKNNWKPDLVSFGV 139
Query: 233 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 292
+ + + + + +M + + V + L+ A + A+ A
Sbjct: 140 IANVYSRVGDYQAILRLFRDME-QAEIKPNVVLFNTLIGTLGRAGKVTLAKGMFDEMASY 198
Query: 293 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 352
+ + IT LI +Y +G DK ++ +++ K K+ Y +L S + G+++
Sbjct: 199 GLEPSE-ITLSILIDMYTKVGALDKALDVYDTIKQKKWKLDVLVYNTLLKSCVESGNIQR 257
Query: 353 VGEII------DQWKQSAT 365
+I QW T
Sbjct: 258 AESLIAEMEREKQWPDHMT 276
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
+TY+ L+H + +A +F +++ L NA YN +++ G V+K + ++EE
Sbjct: 601 QTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEE 660
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
+ K + PDI TYN+ I I++ K D++ G + + V Y +V+ Y
Sbjct: 661 MCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIE-GRGLTPNCVTYAAMVDGY 715
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 11/205 (5%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+ A E+A+ LF+ ++ L+ N + Y M+ Y ++EE+
Sbjct: 672 TYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEM 731
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ V PD F YN+ ++ C ++ EM G V + L+ Y +
Sbjct: 732 LLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEML--EKGFASTVSFNTLIEGYCKSGK 789
Query: 279 LVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 334
L E++ L+E + ++Q+I TY LI G + ++W ++ T+
Sbjct: 790 L--QEANHLLE---EMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTA 844
Query: 335 RNYICILSSYLMLGHLKEVGEIIDQ 359
+ Y +L Y +G++ EV + ++
Sbjct: 845 KTYTSLLHGYHNIGNMSEVSALFEE 869
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
A T TY+ +++ + + + + L NA++Y +MT + G+VE+ +
Sbjct: 422 APTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRM 481
Query: 214 VVEEIKRKNVVPDIFTYN-LWISSCAATLNIDQVKKFLDEM 253
++E ++ + ++PD+F YN L I C A +++ + +L EM
Sbjct: 482 ILERMREQGILPDVFCYNSLIIGFCKAK-RMEEARTYLMEM 521
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 72/161 (44%), Gaps = 5/161 (3%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSET---YTALLHLYAGAKWTEKAEELFERV 183
Y ID +K + +RYF + LS YTAL+ + +A +F +
Sbjct: 533 YGAFIDGYSKAGEMEIADRYFNEM-LSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFI 591
Query: 184 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 243
+ + Y+ ++ G++ + + E++ K ++P+ FTYN IS N+
Sbjct: 592 LSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNV 651
Query: 244 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES 284
D+ + L+EM C G + D V Y L++ A + A++
Sbjct: 652 DKASQLLEEM-CIKGINPDIVTYNILIDGLCKAGEIERAKN 691
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 47/245 (19%), Positives = 95/245 (38%), Gaps = 38/245 (15%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY AL+ + E+A + + + + N +++N ++ G++EK +++E+
Sbjct: 322 TYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEM 381
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K V PD TY+L I N+ + + LDEM
Sbjct: 382 MEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEM------------------------- 416
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+K +TY +I GN + I + + M K + Y
Sbjct: 417 ------------KKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYT 464
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
+++++ G ++E I+++ ++ D+ N L+ F E+A + M +L+
Sbjct: 465 TLMTAHAKEGRVEESRMILERMREQGILP-DVFCYNSLIIGFCKAKRMEEARTYLMEMLE 523
Query: 399 KNCAP 403
+ P
Sbjct: 524 RRLRP 528
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 84/187 (44%), Gaps = 8/187 (4%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
A ++ Q + +G +TVS +++ KS + + A + E M+ K+F+ + Y + I
Sbjct: 759 ALDLFQEMLEKGFASTVS-FNTLIEGYCKSGKLQEANHLLEEMI-EKQFIPNHVTYTSLI 816
Query: 132 DLMTKVFGIHSGERYFEGLPLSAK----TSETYTALLHLYAGAKWTEKAEELFERVKQSN 187
D K + +R + L + + T++TYT+LLH Y + LFE +
Sbjct: 817 DHNCKAGMMGEAKRLW--LEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKG 874
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 247
+ + + Y M+ Y G V + + +EI K + + Y+ I + +V
Sbjct: 875 IEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVL 934
Query: 248 KFLDEMS 254
K L+E+
Sbjct: 935 KLLNEIG 941
Score = 38.1 bits (87), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 99/255 (38%), Gaps = 11/255 (4%)
Query: 153 SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVA 212
+ S + L+ Y + +A +F K + L N ++ + +VE
Sbjct: 141 GSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFW 200
Query: 213 LVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 272
V + + V+PD++TY IS+ N+ K+ L EM + G S + V Y ++
Sbjct: 201 KVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMG-EKGCSPNLVTYNVIIGG 259
Query: 273 YITASHLVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMT 328
A L A +E ++S+ + + TYD LI + + + +
Sbjct: 260 LCRARLLDEA-----IELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDV 314
Query: 329 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEK 388
K Y ++ ++ G +++ I D+ + ++ N LL G EK
Sbjct: 315 GLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGI-EANLIIWNTLLNGVCKAGKMEK 373
Query: 389 ANEFHMLLLQKNCAP 403
A E +++K P
Sbjct: 374 ALEIMQEMMEKGVEP 388
>gi|222636666|gb|EEE66798.1| hypothetical protein OsJ_23544 [Oryza sativa Japonica Group]
Length = 665
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 106/254 (41%), Gaps = 15/254 (5%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
++ Y ++ LYA ++A LF +++ +A +YN ++ + GQ ++E
Sbjct: 11 NDIYGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIME 70
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
++ R + P TYN I++C A N + + +M+ + G D LV I
Sbjct: 71 DMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPD-------LVTHNIVL 123
Query: 277 SHLVNAESSTLVEAEKSITQRQWITYD-----FLIILYAGLGNKDKIDQIWKSLRMTKQK 331
S L N + + I + +T D +I +G + +++ S+R + K
Sbjct: 124 SALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTK 183
Query: 332 MTSR--NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
Y I+ SY + G ++ I D +I A N LLGA++ G+ +A
Sbjct: 184 CPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKP-NIVAYNSLLGAYASRGMHREA 242
Query: 390 NEFHMLLLQKNCAP 403
L+ + P
Sbjct: 243 LAIFNLIKKNGLRP 256
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 55/93 (59%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+YT+LL+ Y + EKA E+F ++K+++ N + YN ++ Y S G +++ ++ E+
Sbjct: 260 SYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEM 319
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 251
++ + PD+ + + +++C I +++ L+
Sbjct: 320 EKDGIQPDVVSISTLLAACGRCRQITRIETILE 352
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 97/226 (42%), Gaps = 3/226 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT+++H Y E + +F+ + + N + YN ++ Y S G + + I
Sbjct: 190 TYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLI 249
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K+ + PDI +Y +++ + ++ ++ ++M +S + V Y L++ Y +A
Sbjct: 250 KKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNK-VSYNALIDAYGSAGM 308
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L A L E EK Q ++ L+ +I+ I ++ R + + Y
Sbjct: 309 LKEA-VGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYN 367
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 384
+ SYL G ++ E+ ++S D N L+ S +G
Sbjct: 368 SGIKSYLSFGDYEKALELYTSMRESNVKP-DAVTYNILISGSSKLG 412
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 159 TYTALLHLY-AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
TYT L+ Y AG W ++A +LF+ ++ + + +A++ + +M + G+ E+V ++E
Sbjct: 458 TYTTLIQAYNAGGGW-KRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLMEF 516
Query: 218 IKRKNVVPDIFTYNLWISSC 237
+K+K++ + +Y I+SC
Sbjct: 517 MKKKSIPLNQKSYFEIIASC 536
>gi|168000162|ref|XP_001752785.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695948|gb|EDQ82289.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 482
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 95/226 (42%), Gaps = 10/226 (4%)
Query: 123 SDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKT---SETYTALLHLYAGAKWTEKAEEL 179
++ Y I+ + K + ER F+ L SA+ + Y +LH Y A + + L
Sbjct: 176 TEVTYQVYINALCKAERFNDAERIFKCLDESAEAKPDARLYNLMLHTYGKAGKFSEQQAL 235
Query: 180 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 239
F ++K + + + +N +M +V E + ++ + PD+ TY I++ +
Sbjct: 236 FRQMKGAGVPMTVVTFNSLMAFQKTVADAEAC---LRHMQAAKIKPDVITYTGLINAYSK 292
Query: 240 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 299
+++ EM SG + Y L++ Y + AES L ++ R
Sbjct: 293 ARRVEEAHVVFREMVA-SGLRPSRIAYNTLLDAYAKCKEVEGAES--LFKSMGQDRCRPD 349
Query: 300 I-TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY 344
I +Y L+ YA GN K +++ K ++ + Y ++ Y
Sbjct: 350 IRSYTTLLAAYANTGNMKKAERLLKRMKQAGLEPNVVTYGTLMQGY 395
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 72/148 (48%), Gaps = 2/148 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT L++ Y+ A+ E+A +F + S L + + YN ++ Y +VE + + +
Sbjct: 282 TYTGLINAYSKARRVEEAHVVFREMVASGLRPSRIAYNTLLDAYAKCKEVEGAESLFKSM 341
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ PDI +Y +++ A T N+ + ++ L M +G + V Y L+ Y T+ H
Sbjct: 342 GQDRCRPDIRSYTTLLAAYANTGNMKKAERLLKRMK-QAGLEPNVVTYGTLMQGY-TSVH 399
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLI 306
+NA T + +K+ + + L+
Sbjct: 400 DINAMLQTFEDLQKAGIKPNSTIFTLLV 427
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 69/166 (41%), Gaps = 8/166 (4%)
Query: 104 YKHALEISEWMVTHKEFVLSD-----SDYATRIDLMTKVFGIHSGERYFE--GLPLSAKT 156
Y A + E V +E V S Y T +D K + E F+ G
Sbjct: 290 YSKARRVEEAHVVFREMVASGLRPSRIAYNTLLDAYAKCKEVEGAESLFKSMGQDRCRPD 349
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
+YT LL YA +KAE L +R+KQ+ L N + Y +M Y SV + + E
Sbjct: 350 IRSYTTLLAAYANTGNMKKAERLLKRMKQAGLEPNVVTYGTLMQGYTSVHDINAMLQTFE 409
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 262
++++ + P+ + L + + + + + +M DSG D
Sbjct: 410 DLQKAGIKPNSTIFTLLVRTFGQQEDFESALSWFKKM-LDSGCPAD 454
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 2/148 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +L+ Y K KA+ +F + Q ++ N Y+ M+ + + +V++ + +E+
Sbjct: 319 TYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEM 378
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
N++PD+ TYN I I K +DEM D G D + Y ++++ + +H
Sbjct: 379 HCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMH-DRGVPHDKITYNSILD-ALCKNH 436
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLI 306
V+ + L + + Q TY L+
Sbjct: 437 QVDKAIALLTKMKDEGIQPDICTYTTLV 464
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/113 (21%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+ L+ + + ++A+ + + + + + YN +M Y V +V K + I
Sbjct: 284 TFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTI 343
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
++ V P+I +Y++ I +D+ EM C++ D V Y +L++
Sbjct: 344 SQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNN-IIPDVVTYNSLID 395
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 141/337 (41%), Gaps = 19/337 (5%)
Query: 75 VIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSD---YATRI 131
+ Q+ G + TV +++ K R AL + + M + D+D Y I
Sbjct: 190 LFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSS----LDADIVLYNVCI 245
Query: 132 DLMTKVFGIHSGERYFEGLPLSA-KTSE-TYTALLHLYAGAKWTEKAEELFERVKQSNLS 189
D KV + ++F + + K E TYT+++ + A ++A E+FE ++++
Sbjct: 246 DSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRV 305
Query: 190 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 249
YN M+ Y S G+ ++ ++E + K +P + YN ++ +D+ K
Sbjct: 306 PCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKV 365
Query: 250 LDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQ-WITYDFLIIL 308
+EM D+ + + Y L+++ A L T E S+ + + + I+
Sbjct: 366 FEEMKKDA--APNLSTYNILIDMLCRAGKL-----DTAFELRDSMQKAGLFPNVRTVNIM 418
Query: 309 YAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDF 368
L K+D+ K+ + + I S LG + V + +++ SD
Sbjct: 419 VDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDC 478
Query: 369 DISAC--NRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
++ L+ F + G E ++ + ++ +NC+P
Sbjct: 479 RTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSP 515
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 106/238 (44%), Gaps = 10/238 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
YT L+ ++ ++ LF+++++ ++ ++ + G+V+ +++E+
Sbjct: 170 AYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEM 229
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K ++ DI YN+ I S +D KF E+ + G D V Y +++ + A+
Sbjct: 230 KSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEAN-GLKPDEVTYTSMIGVLCKANR 288
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L A EK+ +R TY + ++ G G+ K D+ + L + K + + I
Sbjct: 289 LDEA-VEMFEHLEKN--RRVPCTYAYNTMI-MGYGSAGKFDEAYSLLERQRAKGSIPSVI 344
Query: 339 ---CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 393
CIL+ +G + E ++ ++ K+ A ++S N L+ G + A E
Sbjct: 345 AYNCILTCLRKMGKVDEALKVFEEMKKDAAP--NLSTYNILIDMLCRAGKLDTAFELR 400
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 112/300 (37%), Gaps = 50/300 (16%)
Query: 129 TRIDLMTKVFGIHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVKQS 186
T +D M K G FE + + +Y+ L+H A + + ELF +K+
Sbjct: 522 TYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQ 581
Query: 187 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 246
+ YN ++ + G+V K ++EE+K K P + TY I A +D+
Sbjct: 582 GCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEA 641
Query: 247 KKFLDEMSCD---------SGGSDDWVKYVNLVNIYITASHLV-----------NAESST 286
+E S D + K + Y+ L+ N+
Sbjct: 642 YMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDA 701
Query: 287 LVEAEK--------------SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 332
LV+AE+ T Q +TY LI + +K W+ ++ K
Sbjct: 702 LVKAEEINEALVCFQSMKELKCTPNQ-VTYGILINGLCKVRKFNKAFVFWQEMQKQGMKP 760
Query: 333 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC-----------NRLLGAFS 381
++ +Y ++S G++ E G + D++K A SAC NR + AFS
Sbjct: 761 STISYTTMISGLAKAGNIAEAGALFDRFK--ANGGVPDSACYNAMIEGLSNGNRAMDAFS 818
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 112/278 (40%), Gaps = 11/278 (3%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLS 153
++ L KSQ+ A + E M +K + + + ID + KV + + +E + S
Sbjct: 418 MVDRLCKSQKLDEACAMFEEM-DYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDS 476
Query: 154 --AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 211
S YT+L+ + E ++++ + N S + + N M G+ EK
Sbjct: 477 DCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKG 536
Query: 212 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
+ EEIK + VPD +Y++ I ++ + M + G D Y +++
Sbjct: 537 RAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMK-EQGCVLDTRAYNIVID 595
Query: 272 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 331
+ VN L E + + +TY +I GL D++D+ + K K
Sbjct: 596 GFCKCGK-VNKAYQLLEEMKTKGFEPTVVTYGSVI---DGLAKIDRLDEAYMLFEEAKSK 651
Query: 332 MTSRN---YICILSSYLMLGHLKEVGEIIDQWKQSATS 366
N Y ++ + +G + E I+++ Q +
Sbjct: 652 RIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLT 689
>gi|334185431|ref|NP_188439.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|322510063|sp|Q5G1S8.2|PP241_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g18110, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 1270; Flags: Precursor
gi|9294066|dbj|BAB02023.1| unnamed protein product [Arabidopsis thaliana]
gi|332642528|gb|AEE76049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1440
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/328 (19%), Positives = 137/328 (41%), Gaps = 16/328 (4%)
Query: 85 QATVSELRHILKELRKSQRYKHALEISEWM-VTHKEFVLSDSDYATRIDLMTKVFGIHSG 143
Q T ++ ++K + + + ++ ALE+ EW+ + H S A + + V G +
Sbjct: 153 QMTPTDYCFVVKSVGQ-ESWQRALEVFEWLNLRHWH-----SPNARMVAAILGVLGRWNQ 206
Query: 144 ER-----YFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEM 198
E + P + Y A++ +Y+ + KA+EL + ++Q + + +N +
Sbjct: 207 ESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTL 266
Query: 199 MTLYM-SVGQVEKVAL-VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCD 256
+ + S G +A+ +++ ++ + PD TYN +S+C+ N+D K ++M
Sbjct: 267 INARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAH 326
Query: 257 SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKD 316
D W Y ++++Y AE +E E +TY+ L+ +A N +
Sbjct: 327 RCQPDLWT-YNAMISVYGRCGLAAEAE-RLFMELELKGFFPDAVTYNSLLYAFARERNTE 384
Query: 317 KIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRL 376
K+ ++++ ++ Y I+ Y G L ++ K + + D L
Sbjct: 385 KVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVL 444
Query: 377 LGAFSDVGLTEKANEFHMLLLQKNCAPT 404
+ + T +A +L PT
Sbjct: 445 IDSLGKANRTVEAAALMSEMLDVGIKPT 472
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 79/187 (42%), Gaps = 1/187 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY A++ +Y +AE LF ++ +A+ YN ++ + EKV V +++
Sbjct: 334 TYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQM 393
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
++ D TYN I +D + +M SG + D + Y L++ A+
Sbjct: 394 QKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANR 453
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
V A ++ + E + TY LI YA G +++ + + + + K + Y
Sbjct: 454 TVEA-AALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYS 512
Query: 339 CILSSYL 345
+L L
Sbjct: 513 VMLDVLL 519
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/186 (19%), Positives = 92/186 (49%), Gaps = 2/186 (1%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
+ ++L +Y + +K ++++R+K++ L + YN ++ +Y + E+ L++++++
Sbjct: 930 WNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMR 989
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
+ P + TY IS+ ++Q ++ +E+ G D Y ++ I +
Sbjct: 990 NLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEEL-LSKGLKLDRSFYHTMMKISRDSGSD 1048
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 339
AE L + + + T L++ Y+ GN + +++ +L+ T+ ++T+ Y
Sbjct: 1049 SKAE-KLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSS 1107
Query: 340 ILSSYL 345
++ +YL
Sbjct: 1108 VIDAYL 1113
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
+TY +L+ + K E+AE+LFE + L + Y+ MM + G K +++
Sbjct: 998 DTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQM 1057
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274
+K + P + T +L + S +++ N + +K L + D+ + Y ++++ Y+
Sbjct: 1058 MKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLK-DTEVELTTLPYSSVIDAYL 1113
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 67/167 (40%), Gaps = 6/167 (3%)
Query: 70 RSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYAT 129
R+ N + R +G TV + +L L R + + E + F +S S
Sbjct: 807 RAIFNTMMR---DGPSPTVESINILLHALCVDGRLEELYVVVEEL-QDMGFKISKSSILL 862
Query: 130 RIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQSN 187
+D + I ++ + + + T Y ++ L K AE + ++++N
Sbjct: 863 MLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEAN 922
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 234
++N M+ +Y ++ +K V + IK + PD TYN I
Sbjct: 923 FKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLI 969
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 99/244 (40%), Gaps = 8/244 (3%)
Query: 165 HLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVV 224
L +G A EL + V+ S L +A+ YN +++ ++ V E+++
Sbjct: 270 RLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQ 329
Query: 225 PDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES 284
PD++TYN IS + ++ E+ G D V Y +L+ + N E
Sbjct: 330 PDLWTYNAMISVYGRCGLAAEAERLFMELEL-KGFFPDAVTYNSLLYAFARER---NTEK 385
Query: 285 STLV--EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR-MTKQKMTSRNYICIL 341
V + +K + +TY+ +I +Y G D Q++K ++ ++ + + Y ++
Sbjct: 386 VKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLI 445
Query: 342 SSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 401
S E ++ + + + L+ ++ G E+A + +L+
Sbjct: 446 DSLGKANRTVEAAALMSEMLDVGIKP-TLQTYSALICGYAKAGKREEAEDTFSCMLRSGT 504
Query: 402 APTN 405
P N
Sbjct: 505 KPDN 508
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 106/233 (45%), Gaps = 9/233 (3%)
Query: 175 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 234
+AE+L +++ + + ++Y +++ + +G V + +E++RK +VPDI TY I
Sbjct: 330 EAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVI 389
Query: 235 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 294
+ + + ++ +EM G D V Y L++ Y A + A S +K +
Sbjct: 390 HGICKSGKMVEAREMFNEMLV-KGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGL 448
Query: 295 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN---YICILSSYLMLGHLK 351
T +TY L GL +ID + L +K N Y I++ +G+++
Sbjct: 449 TPNV-VTYT---ALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIE 504
Query: 352 EVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 404
+ +++++ + D L+ A+ +G KA+E ++L K PT
Sbjct: 505 QTVKLMEEMDLAGFYP-DTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPT 556
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 71/148 (47%), Gaps = 2/148 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYTAL+ Y A ++A + ++ Q L+ N + Y + G+++ ++ E+
Sbjct: 419 TYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEM 478
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
RK + P+++TYN ++ NI+Q K ++EM +G D + Y L++ Y
Sbjct: 479 SRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDL-AGFYPDTITYTTLMDAYCKMGE 537
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLI 306
+ A + K + Q +T++ L+
Sbjct: 538 MAKAHELLRIMLNKRL-QPTLVTFNVLM 564
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 110/266 (41%), Gaps = 26/266 (9%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT+++H + +A E+F + L + + Y ++ Y G++++ V ++
Sbjct: 384 TYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQM 443
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+K + P++ TY ID + L EMS G + Y +VN
Sbjct: 444 VQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMS-RKGLQPNVYTYNTIVN---GLCK 499
Query: 279 LVNAESSTLVEAEKSIT--QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 336
+ N E + + E + ITY L+ Y +G K ++ + + + + T
Sbjct: 500 IGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVT 559
Query: 337 YICILSSYLMLGHLKEVGEIIDQW-----------------KQSATSDFDISACNRLLGA 379
+ +++ + M G L++ GE + +W KQ + ++ A + A
Sbjct: 560 FNVLMNGFCMSGMLED-GERLIEWMLEKGIMPNATTFNSLMKQYCIKN-NMRATTEIYKA 617
Query: 380 FSDVGLTEKANEFHMLLLQKNCAPTN 405
D G+ +N ++ +L++ +C N
Sbjct: 618 MHDRGVMPDSNTYN-ILIKGHCKARN 642
>gi|356536919|ref|XP_003536980.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Glycine max]
Length = 716
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 94/218 (43%), Gaps = 11/218 (5%)
Query: 154 AKTSETYTALLHLYAGAKW---TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 210
A + TYT L+ Y A T + E R+ + + Y +++ + VG +++
Sbjct: 344 APNTRTYTTLMKGYMNAGRVSDTVRMLEAMRRLDDKGSQPDHVSYTTVVSALVKVGAMDR 403
Query: 211 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 270
V+ E+ R V ++ TYN+ + L ID+ ++ L EM D+G D V Y
Sbjct: 404 ARQVLAEMTRIGVPANLITYNVLLKGYCKQLQIDKARELLKEMVDDAGIQPDVVSY---- 459
Query: 271 NIYITASHLVNAESSTLV---EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 327
NI I LV+ + L E I+Y L+ +A G +++ +
Sbjct: 460 NILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFAYSGQPKLAHRVFNEMDS 519
Query: 328 -TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
+ K+ + ++ Y LG ++E +++ + K+S
Sbjct: 520 DPRVKVDLIAWNMLVEGYCRLGLVEEAKKVVQKMKESG 557
>gi|147788269|emb|CAN69960.1| hypothetical protein VITISV_032887 [Vitis vinifera]
Length = 472
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 96/214 (44%), Gaps = 3/214 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT L+ K +A L E + ++ + +YN +M Y + + + V +++
Sbjct: 241 TYTILIDNVCNGKNLREATRLLEVLGEAGFKPDCYVYNTIMKGYCILDKGSEAIGVYKKM 300
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K + V PD+ TYN I + + + + +KFLD M+ + G D V Y +L+N +
Sbjct: 301 KEEGVEPDLVTYNTLIFGLSKSGRVKEARKFLDIMA-EMGHFPDAVTYTSLMNGLCREGN 359
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ A + L E E TY+ L+ L ++ +++ ++ K+ +Y
Sbjct: 360 ALGA-LALLEEMEAKGCSPNSCTYNTLLHGLCKLRMLERGIELYGVMKSGGMKLEKASYA 418
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA 372
+ + G + E E D +S + D D++A
Sbjct: 419 TFVRALCKEGRVAEAYEAFDYVVESKSFD-DVTA 451
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 79/217 (36%), Gaps = 28/217 (12%)
Query: 204 SVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW 263
S G+ E +V+E+ K+ PD FTYN I T + V F+DE+ D
Sbjct: 180 SAGREEHAIELVKELSLKHSPPDSFTYNFIIRHLCKTRALSTVYNFIDELQNSFQLKPDL 239
Query: 264 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 323
V Y L++ +L A V E ++ Y+ ++ Y L + ++K
Sbjct: 240 VTYTILIDNVCNGKNLREATRLLEVLGEAGFKPDCYV-YNTIMKGYCILDKGSEAIGVYK 298
Query: 324 SLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDV 383
++ + Y ++ G +KE + +D + +G F D
Sbjct: 299 KMKEEGVEPDLVTYNTLIFGLSKSGRVKEARKFLDIMAE--------------MGHFPDA 344
Query: 384 --------GLTEKANEFHMLLL-----QKNCAPTNAS 407
GL + N L L K C+P + +
Sbjct: 345 VTYTSLMNGLCREGNALGALALLEEMEAKGCSPNSCT 381
>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
Length = 814
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/253 (17%), Positives = 102/253 (40%), Gaps = 1/253 (0%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
+T E + ++ Y+ A A ++ ++++ + N L+ N + +++ ++EK
Sbjct: 243 RTPEAFLRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRF 302
Query: 215 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274
+E ++ +VP++ TYN I +++ + LD+M G D V Y ++
Sbjct: 303 LERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLDDMP-SKGCLPDKVSYYTIMGYLC 361
Query: 275 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 334
+V A++ R +TY+ LI + + D+ K ++
Sbjct: 362 KEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDK 421
Query: 335 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 394
Y I+ + G + E ++I++ D+ ++ F +G +KA +
Sbjct: 422 VGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQ 481
Query: 395 LLLQKNCAPTNAS 407
++ P S
Sbjct: 482 IMHTHGYKPNTVS 494
>gi|115529197|dbj|BAF34331.1| pentatricopeptide repeat protein [Physcomitrella patens]
Length = 728
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 93/219 (42%), Gaps = 9/219 (4%)
Query: 174 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 233
E+AE + + V++S +S + YN M+T Y +K A +VE+++ +++VPD TY+
Sbjct: 153 EEAERIMDTVEESGMSLGLVGYNSMITAYGKACLYDKAARLVEKMREEDLVPDSITYSCM 212
Query: 234 ISSCAATLNIDQVKKFLDEM---SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 290
I +C + + + EM S+ + L++ Y A V + E
Sbjct: 213 IGACGRVGKLKEALSWFAEMKRLEIKPASSN----FNTLISPYGKAKD-VEGIVRVITEM 267
Query: 291 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 350
+K + W T D + Y G + +I LR + +Y +L YL
Sbjct: 268 KKYGCKPDWQTLDAAVRAYDRAGLIKDVTEILNLLRDAGWVEETGSYGTLLHVYLKCNLP 327
Query: 351 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
KE I +++ + + C L+ F D + + A
Sbjct: 328 KEALRIFLAMRKAGMAPKEY-MCRSLICTFRDAEMFDGA 365
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
E Y ++L Y A EK ++ R++ S + + YN ++ Y + ++ +
Sbjct: 591 EAYNSILDAYGKAGQMEKVSDVLARMENSGMRMDLASYNILINTYGKNYMIAEMETLFRT 650
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
++ + VVPD +TYN I + D+ + M D+G S D V Y+ LV+ + A
Sbjct: 651 MQEEGVVPDRWTYNTIIRTYGFADYPDRAVYWFKAMQ-DAGISPDRVTYMILVSTFERAG 709
Query: 278 HLVNA 282
++ A
Sbjct: 710 NIDEA 714
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 79/184 (42%), Gaps = 12/184 (6%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y +++ Y A +KA L E++++ +L +++ Y+ M+ VG++++ E+K
Sbjct: 174 YNSMITAYGKACLYDKAARLVEKMREEDLVPDSITYSCMIGACGRVGKLKEALSWFAEMK 233
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
R + P +N IS +++ + + + EM G DW V Y A +
Sbjct: 234 RLEIKPASSNFNTLISPYGKAKDVEGIVRVITEMK-KYGCKPDWQTLDAAVRAYDRAGLI 292
Query: 280 VNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
+ + E + W+ +Y L+ +Y + +I+ L M K M +
Sbjct: 293 KD-----VTEILNLLRDAGWVEETGSYGTLLHVYLKCNLPKEALRIF--LAMRKAGMAPK 345
Query: 336 NYIC 339
Y+C
Sbjct: 346 EYMC 349
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 91/212 (42%), Gaps = 9/212 (4%)
Query: 127 YATRIDLMTKVFGIHS-GERYFEGLPLSAKTSE----TYTALLHLYAGAKWTEKAEELFE 181
Y ++M ++G ER + L L+ + +++ L+H YA + E
Sbjct: 520 YNITFNVMIDLYGKAGMPERAHKALKLAQQFGSADKISFSTLVHAYAKKQDFPNMEAALW 579
Query: 182 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL 241
++ + + YN ++ Y GQ+EKV+ V+ ++ + D+ +YN+ I++
Sbjct: 580 EMQNAGYGSSLEAYNSILDAYGKAGQMEKVSDVLARMENSGMRMDLASYNILINTYGKNY 639
Query: 242 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWIT 301
I +++ M + D W Y ++ Y A + A + I+ + +T
Sbjct: 640 MIAEMETLFRTMQEEGVVPDRWT-YNTIIRTYGFADYPDRAVYWFKAMQDAGISPDR-VT 697
Query: 302 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
Y L+ + GN D+ + W LRM++ T
Sbjct: 698 YMILVSTFERAGNIDEAAR-W-CLRMSQAGYT 727
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 40/80 (50%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
E+ ++++Y ++AE LF ++ S + YN M+ +YM E V +
Sbjct: 382 ESSCTMIYVYGMNGDVKEAEGLFHSLRSSVKRLDIFAYNVMINVYMRCDMPEGAIKVYKL 441
Query: 218 IKRKNVVPDIFTYNLWISSC 237
++ +++PD +TY+ + C
Sbjct: 442 MEEDHLLPDAYTYHSMLRMC 461
>gi|302813417|ref|XP_002988394.1| hypothetical protein SELMODRAFT_128001 [Selaginella moellendorffii]
gi|300143796|gb|EFJ10484.1| hypothetical protein SELMODRAFT_128001 [Selaginella moellendorffii]
Length = 388
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 106/252 (42%), Gaps = 10/252 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL--MYNEMMTLYMSVGQVEKVALVVE 216
TY L+ ++ + + A EL E++ S + + YN ++ + V V K ++E
Sbjct: 48 TYNTLIDVFHKLERFDSARELLEQMWDSGIRPGVMAETYNNVIASFCEVCNVRKAKGILE 107
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
+ PD+ TYN IS D + + EM + + + Y ++N +
Sbjct: 108 LMIDSGCKPDVVTYNTLISGLCKVRRADDALQLMREME----PAPNTITYNTVINGLWRS 163
Query: 277 SHLVNAESSTLVEAEKSITQRQWI-TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
+ E+ L++ S+ + TY+ +I +K ++ +R K +
Sbjct: 164 RK--DTEAQALLDEMISVGCPFSVSTYNCVIANLCRSREMEKAVDVFLYMRKKKCETDEV 221
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 395
+ ++ +L L++ G +D W A D+ + +LL A D G +KA E L
Sbjct: 222 TFATLVDGFLRDKRLEDAGGTLD-WMARAGIPSDVKSYTKLLNALCDRGSAQKACEIFNL 280
Query: 396 LLQKNCAPTNAS 407
++ + APT S
Sbjct: 281 MVDRGYAPTLVS 292
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/179 (20%), Positives = 76/179 (42%), Gaps = 9/179 (5%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
A ++ +S G +VS ++ L +S+ + A+++ +M K+ + +AT +
Sbjct: 169 AQALLDEMISVGCPFSVSTYNCVIANLCRSREMEKAVDVFLYM-RKKKCETDEVTFATLV 227
Query: 132 DLMTKVFGIHSGERYFE-----GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQS 186
D + + + G+P K+ YT LL+ +KA E+F +
Sbjct: 228 DGFLRDKRLEDAGGTLDWMARAGIPSDVKS---YTKLLNALCDRGSAQKACEIFNLMVDR 284
Query: 187 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 245
+ + YN ++ +VE ++ E++ + + PD+ +Y I A ID+
Sbjct: 285 GYAPTLVSYNVLLKGLCKALRVEHALVLFREMQEREIQPDVVSYTTVIKGLCAARRIDE 343
>gi|242062226|ref|XP_002452402.1| hypothetical protein SORBIDRAFT_04g025130 [Sorghum bicolor]
gi|241932233|gb|EES05378.1| hypothetical protein SORBIDRAFT_04g025130 [Sorghum bicolor]
Length = 506
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/246 (19%), Positives = 95/246 (38%), Gaps = 6/246 (2%)
Query: 151 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 210
P A + T+ +H + + ++A E +K + Y ++ Y +
Sbjct: 219 PHIAPDAYTFNIFVHGWCSVRRIDEAMWTIEEMKNRGFPPIVITYTAVLEAYCKQRNFRR 278
Query: 211 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 270
V +++ + + P++ TY + ++S ++ D M SG D + Y L+
Sbjct: 279 VYEILDSMSSQGCHPNVITYTMIMTSLTKCERFEEALSVSDRMK-SSGCKPDTLFYNALI 337
Query: 271 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 330
N+ A HL A VE +++ R TY+ +I + G D + K +
Sbjct: 338 NLLGRAGHLFEANQVFRVEMPRNVVPRNVATYNTMISILCQYGRDDDALDVLKEMEAQSC 397
Query: 331 KMTSRNYICILSSYLMLGHLKEVGEI---IDQWKQSATSDFDISACNRLLGAFSDVGLTE 387
K + Y +L L+ G + G I + + + D+ L+ VG T+
Sbjct: 398 KPDLQTYQPLLR--LLFGRRGQTGAIHHLLSELRDRNGLGLDLDTYTLLIHGLCRVGETD 455
Query: 388 KANEFH 393
A + +
Sbjct: 456 WAYQLY 461
>gi|225438599|ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic [Vitis vinifera]
gi|296082481|emb|CBI21486.3| unnamed protein product [Vitis vinifera]
Length = 489
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/335 (19%), Positives = 136/335 (40%), Gaps = 62/335 (18%)
Query: 93 HILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLM------------------ 134
+ +EL K+ ++ LE+ WM + ++ + Y+ I +M
Sbjct: 103 RLFEELGKTDKWLQCLEVFRWMQKQRWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRN 162
Query: 135 ------TKVFG------IHSGER---------YFE---GLPLSAKTSETYTALLHLYAGA 170
T V+ +HS ++ YF+ G+ TY LL +A A
Sbjct: 163 SGCRPDTSVYNALITAHLHSRDKSKALIKALGYFDKMKGMERCKPNIVTYNILLRAFAQA 222
Query: 171 KWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 230
+ +A LF+ + +S +S + +N +M Y G ++++ V+ +K PDI T+
Sbjct: 223 QNVNQANALFKELNESIVSPDIFTFNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 282
Query: 231 NLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 290
N+ I S D++++ + ++ + S + N + L E
Sbjct: 283 NVLIDSYGRRQEFDKMEQVFKSL----------LRSKEKPTLPTFNSMITNYGKARLKEK 332
Query: 291 EKSITQR--------QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILS 342
+++ ++ +ITY+ LI++Y + +I+ + +K++M +L
Sbjct: 333 AENVFKKMTDMGYAPNFITYESLIMMYGFCDCISRAREIFDEMMASKKEMKVSTLNAMLE 392
Query: 343 SYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLL 377
Y M G E ++++ +++ F S+ +LL
Sbjct: 393 VYCMNGLPMEADLLLERARKN--RPFPGSSTYKLL 425
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 13/201 (6%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
+ TY AL+ A E AE L ++ + N +++N M Y G++++ +
Sbjct: 357 AHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQA 416
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
+++K + D+FTYN+ + D+ K L+ M + G + V + + IY
Sbjct: 417 IMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSM-VEKGVKPNVVTFTMFIEIYCKE 475
Query: 277 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 336
+L AE + EK ITY+ LI Y K+K+ Q K K +M ++
Sbjct: 476 GNLAEAE-RLFRDMEKKGEVPNIITYNTLIDAYC---KKEKVKQAHK----IKSEMINKG 527
Query: 337 YICILSSYLMLGHLKEVGEII 357
+ L +Y L H GE I
Sbjct: 528 LLPDLYTYSSLIH----GECI 544
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY LL+ Y G K + +E+ + +++ + F+ Y+ ++ Y S G +E+ + EE+
Sbjct: 254 TYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEM 313
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 254
+ KN+ D++ Y+ IS N+ + DEMS
Sbjct: 314 REKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMS 349
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY+ L+ Y+ + E+AE++FE +++ N+ + +Y+ M++ +G +++ + +E+
Sbjct: 289 TYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEM 348
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD 261
++++VP+ TY I ++ + L EM S G D
Sbjct: 349 SQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQ--SKGVD 389
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+T + +Y +AE LF +++ N + YN ++ Y +V++ + E+
Sbjct: 464 TFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEM 523
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
K ++PD++TY+ I +D+ K +EM
Sbjct: 524 INKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEM 558
>gi|357122825|ref|XP_003563115.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Brachypodium distachyon]
Length = 410
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/309 (19%), Positives = 123/309 (39%), Gaps = 48/309 (15%)
Query: 140 IHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 197
+ +R F+ +P T T+TAL+H Y EK LFE+++ + N YN
Sbjct: 54 VAEAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRREKGLALFEKMRIGGIEPNLYTYNI 113
Query: 198 MMTLYMSVGQVEKVALVVEEI-----------------------------------KRKN 222
++ + G+ E+ L+ EE+ +R+
Sbjct: 114 LVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLLELMRREG 173
Query: 223 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 282
+ P + T+NL + + F ++M +G V Y L+ + A ++ A
Sbjct: 174 IRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRM-AGYQPSAVTYNALIAGFCRARDMIRA 232
Query: 283 ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILS 342
+ E+ + + +TY LI +A + DK +++ + ++ R Y ++
Sbjct: 233 NRAFSDMKERGLAPTK-VTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLVH 291
Query: 343 SYLMLGHLKEVGEII----DQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
+ M G++K+ ++ ++ Q +D+ L+ + G + KA + M + +
Sbjct: 292 ALCMEGNMKDARKLFQSIGEKGLQVGNVIYDM-----LIYGYGREGSSYKAMKLIMEMRK 346
Query: 399 KNCAPTNAS 407
K P +AS
Sbjct: 347 KGFVPNSAS 355
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 34/184 (18%), Positives = 82/184 (44%), Gaps = 2/184 (1%)
Query: 161 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 220
TAL+H Y + +A+ +F+ + + L+ N + + ++ Y G+ EK + E+++
Sbjct: 42 TALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRREKGLALFEKMRI 101
Query: 221 KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLV 280
+ P+++TYN+ + T ++ + +EM G + + V Y L+ +
Sbjct: 102 GGIEPNLYTYNILVGEWCRTGEFERARLLFEEMPA-KGITRNVVSYNTLIAGLCRYRKMK 160
Query: 281 NAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICI 340
+A + L + + +T++ L+ Y G +RM + ++ Y +
Sbjct: 161 DA-TQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNAL 219
Query: 341 LSSY 344
++ +
Sbjct: 220 IAGF 223
>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Brachypodium distachyon]
Length = 1102
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/317 (20%), Positives = 124/317 (39%), Gaps = 26/317 (8%)
Query: 69 KRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYA 128
+ A NV+ S A +E + K + + R H E +M+ D A
Sbjct: 75 RPGAQNVVHMLRSAA--ADPAEALQLFKSVAQQPRIVHTTESCNYMLELMRAHGRVRDMA 132
Query: 129 TRIDLMTK------------VF---GIHSGERYFE-GLPLSAKT-----SETYTALLHLY 167
DLM + +F G+ G R LP+ + S TY L++
Sbjct: 133 QVFDLMQRQIVKANVGTFLTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYNGLIYFL 192
Query: 168 AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 227
+ + +A E+++ + + + Y+ +M L VE V ++ E++ V P++
Sbjct: 193 VKSGYDREAMEVYKVMATDGIVPSVRTYSVLM-LAFGKRDVETVVWLLREMEDHGVKPNV 251
Query: 228 FTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTL 287
++Y + I ++ K L +M D G D V L+ I A + +A+
Sbjct: 252 YSYTICIRVLGQAGRFEEAYKILQKME-DEGCKPDVVTNTVLIQILCDAGRVSDAKD-VF 309
Query: 288 VEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 347
+ + S + +TY L+ G+ + +IW +++ Y ++ + +
Sbjct: 310 WKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQV 369
Query: 348 GHLKEVGEIIDQWKQSA 364
G + E ++ DQ KQ
Sbjct: 370 GRVDEASDVFDQMKQKG 386
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 115/283 (40%), Gaps = 11/283 (3%)
Query: 110 ISEWMVTHKEFVLSDSDYATR------IDLMTKVFGIHSGERYFEGLPLSAKTSETY--T 161
++E + T KE++L A R ++ + K G+ + E + LS + + +
Sbjct: 686 MNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIALSRILLDDFFLS 745
Query: 162 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 221
L+ +K +A EL ++ + +S YN ++ + ++ + E+KR
Sbjct: 746 PLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRL 805
Query: 222 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 281
PD FTYNL + + ++ I+ + K EM C G +V Y +++ + + L
Sbjct: 806 GCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHC-KGYESTYVTYNTIISGLVKSKMLYE 864
Query: 282 AESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICIL 341
A + + TY L+ G + + ++ + K Y +L
Sbjct: 865 AMDLYYKLMSEGFSPTPC-TYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILL 923
Query: 342 SSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 384
+ Y + G+ ++V E+ + DI + L+GA G
Sbjct: 924 NGYRLAGNTEKVCELFQNMVDQGINP-DIKSYTVLIGALCTAG 965
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 50/254 (19%), Positives = 103/254 (40%), Gaps = 7/254 (2%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
T TY ++ +K +A +L+ ++ S Y ++ + G++E +
Sbjct: 845 TYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLF 904
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275
+E+ P+ YN+ ++ N ++V + M D G + D Y L+ T
Sbjct: 905 DEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNM-VDQGINPDIKSYTVLIGALCT 963
Query: 276 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
A L N S + + + ITY+ LI GLG ++++ ++ +
Sbjct: 964 AGRL-NDSLSYFRQLTELGLEPDLITYNLLI---HGLGRSGRLEEAVSLFNDMEKSGIAP 1019
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDF--DISACNRLLGAFSDVGLTEKANEFH 393
N S L LG + E +++ + + ++ N L+G +S G T+ A +
Sbjct: 1020 NLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASY 1079
Query: 394 MLLLQKNCAPTNAS 407
++ C P +++
Sbjct: 1080 GQMIVGGCPPNSST 1093
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 120/303 (39%), Gaps = 23/303 (7%)
Query: 52 SDGKDDLKSRIFRISLPKRSATN-----VIQRW---VSEGNQATVSELRHILKELRKSQR 103
SD K D R+ I+L + N VI+ W ++G V ++ L + R
Sbjct: 315 SDQKPD---RVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGR 371
Query: 104 YKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTAL 163
A ++ + M K Y + I K ++ F + + T YT +
Sbjct: 372 VDEASDVFDQM-KQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYV 430
Query: 164 LHL--YAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 221
L + Y + + KA + +E +K + + + N ++ G++ V E+K
Sbjct: 431 LFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSI 490
Query: 222 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 281
V PD TY + I C+ N D+ K EM ++ D + +L++ A N
Sbjct: 491 GVCPDNITYTMMIKCCSKASNADEAMKVFSEM-IETRCVPDVLAVNSLIDTLYKAGR-GN 548
Query: 282 AESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICIL 341
E ++ TY+ L+ AGLG + K+ ++ L ++M S +Y L
Sbjct: 549 EAWKIFHELKEMNLDPTDCTYNTLL---AGLGREGKVKEVMHLL----EEMNSNSYPPNL 601
Query: 342 SSY 344
+Y
Sbjct: 602 ITY 604
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 99/237 (41%), Gaps = 5/237 (2%)
Query: 82 EGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIH 141
+G ++T I+ L KS+ A+++ + + + F + Y +D + K I
Sbjct: 840 KGYESTYVTYNTIISGLVKSKMLYEAMDLY-YKLMSEGFSPTPCTYGPLLDGLLKDGKIE 898
Query: 142 SGERYF-EGLPLSAKTSET-YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMM 199
E F E L K + Y LL+ Y A TEK ELF+ + ++ + Y ++
Sbjct: 899 DAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLI 958
Query: 200 TLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG 259
+ G++ ++ + PD+ TYNL I + +++ ++M SG
Sbjct: 959 GALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDME-KSGI 1017
Query: 260 SDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKD 316
+ + Y +L+ +Y+ E K+ + TY+ LI Y+ G+ D
Sbjct: 1018 APNLYTYNSLI-LYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTD 1073
>gi|357487221|ref|XP_003613898.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515233|gb|AES96856.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 807
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
S TY L+ +Y A + E+F ++ + ++ + +N M+ LY + G++ +V+L+++
Sbjct: 271 SHTYNTLIDIYGKAGQIQAVYEIFAKMIKQGVAPTTVTFNTMIHLYGNHGRIREVSLLLQ 330
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
++ PD TYN+ IS NI K+L +M ++ D V Y L+ Y T
Sbjct: 331 RMEELRCPPDTRTYNILISVLVKHNNIKLAAKYLMKMK-EAFLEPDLVSYRTLLYAYSTR 389
Query: 277 SHLVNAE 283
+ AE
Sbjct: 390 KMVQEAE 396
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 119/238 (50%), Gaps = 11/238 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y++L+H+ A A A+ +++++ L + ++Y +++ ++ + Q++ + E+
Sbjct: 516 SYSSLIHILASADKPHIAKPYLNKMQEAGLVSDCILYCAVISSFVKLSQLDMAEELYIEM 575
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
V PD Y++ I++ A N+ + +LD M ++G + Y +L+ +Y +
Sbjct: 576 IGHTVKPDAIIYSVLINAFADVGNVIKATGYLDRMR-NAGFVGNQAIYNSLMKLYTKIGY 634
Query: 279 LVNAESS-TLVEAEKSITQRQWI-TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR- 335
L A+ + TL++ S+ Q + + + +I LY ++ +I++SL+ K + +
Sbjct: 635 LKEAQQTYTLLQ---SLDQAPSVFSSNCMIDLYTERLMVEQAKEIFESLK--KNNIANEF 689
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFS-DVGLTEKANEF 392
+Y +L Y +G L E +I Q ++ D+ + N +LG +S D L E F
Sbjct: 690 SYAMMLCMYKKIGRLDEAFQIAKQMRKQGLLT-DLLSYNNVLGLYSMDRRLREAKETF 746
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 32/167 (19%), Positives = 73/167 (43%), Gaps = 3/167 (1%)
Query: 115 VTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLS--AKTSETYTALLHLYAGAKW 172
V+H L+ Y T ID+ K I + F + A T+ T+ ++HLY
Sbjct: 262 VSHVNVCLNSHTYNTLIDIYGKAGQIQAVYEIFAKMIKQGVAPTTVTFNTMIHLYGNHGR 321
Query: 173 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 232
+ L +R+++ + YN ++++ + ++ A + ++K + PD+ +Y
Sbjct: 322 IREVSLLLQRMEELRCPPDTRTYNILISVLVKHNNIKLAAKYLMKMKEAFLEPDLVSYRT 381
Query: 233 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
+ + + + + ++ + EM + G D L +Y+ ++ L
Sbjct: 382 LLYAYSTRKMVQEAEELVREMD-ERGLKIDEFTQAALTRMYVESNML 427
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 139/328 (42%), Gaps = 31/328 (9%)
Query: 94 ILKELRKSQRYKHALEI--SEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLP 151
+L+ L K++R+ A +I E + H D+++ T L+ ER F+
Sbjct: 75 LLRTLVKARRHHQAYQIFRDELLGQH-----CDTNHITYNTLIGGFCKAGDMERAFQ--- 126
Query: 152 LSAKTSE--------TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM 203
L A+ E T+++++ +A + F + + +++++N ++
Sbjct: 127 LLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFR--ESVECAPDSVLFNILVHGLC 184
Query: 204 SVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW 263
Q+ + ++EE+ + +VPD+ TYN I + +++ ++ L+ M +
Sbjct: 185 KANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMV-KRKVRPNL 243
Query: 264 VKYVNLVNIYITASHLVNAESSTLVEAE-KSITQRQWITYDFLIILYAGLGNKDKIDQIW 322
V Y L+ Y + L+E +S T +T++ LI +G K KID+
Sbjct: 244 VTYNTLIYGYCKTG--CTGLAHQLIERMIQSGTHPDVVTFNSLI---SGFCQKSKIDKAC 298
Query: 323 KSLRMTKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGA 379
+ L + K+ + + N Y ++S G E E++ + DI N L+G
Sbjct: 299 EVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILP-DIITYNSLIGI 357
Query: 380 FSDVGLTEKANEFHMLLLQKNCAPTNAS 407
F E+A + L++++ P S
Sbjct: 358 FCRNFQIEQAFQIQNLMVERGVIPDGIS 385
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 110/250 (44%), Gaps = 14/250 (5%)
Query: 159 TYTALLHLYAGAKWTEKAEELF-ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
T LL A+ +A ++F + + + N + YN ++ + G +E+ ++ E
Sbjct: 71 TCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAE 130
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE-MSCDSGGSDDWVKYVNLVNIYITA 276
+K + PD+ T++ + + T N+ + ++ E + C + D V + LV+ A
Sbjct: 131 MKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVEC----APDSVLFNILVHGLCKA 186
Query: 277 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR-MTKQKMTSR 335
+ L A +E+ I +TY+ LI GL ++++ + L M K+K+
Sbjct: 187 NQLSEARQMIEEMSERGIVP-DVVTYNSLI---DGLCKSYRMEEARQLLETMVKRKVRPN 242
Query: 336 --NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 393
Y ++ Y G ++I++ QS T D+ N L+ F +KA E
Sbjct: 243 LVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHP-DVVTFNSLISGFCQKSKIDKACEVL 301
Query: 394 MLLLQKNCAP 403
L+ + CAP
Sbjct: 302 HLMKKGLCAP 311
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+ +L+ + +KA E+ +K+ + N + YN +++ G+ + ++ E+
Sbjct: 280 TFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEM 339
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
+ ++PDI TYN I I+Q + + M + G D + Y L
Sbjct: 340 DGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMV-ERGVIPDGISYCTL 389
>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
Length = 769
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 8/203 (3%)
Query: 168 AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 227
G +KA +L + + + + Y++++T +VEK L+ +E+K V PD+
Sbjct: 433 CGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDV 492
Query: 228 FTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES-- 284
+TY + I S C A L I+Q + +EM G S V Y L++ Y+ A + A
Sbjct: 493 YTYTILIDSFCKAGL-IEQAQWLFEEMR-SVGCSPTVVTYTALIHAYLKAKQVPQANDIF 550
Query: 285 STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY 344
+V+A + +TY L+ GN K +++ L T S Y +
Sbjct: 551 HRMVDAG---CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRH 607
Query: 345 LMLGHLKEVGEIIDQWKQSATSD 367
+ ++ G ++D ++ D
Sbjct: 608 TLAPNVVTYGALVDGLCKAHKVD 630
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 128/321 (39%), Gaps = 26/321 (8%)
Query: 103 RYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TY 160
++ A ++ + M+ K FV S Y+ I + + F+ + + T + TY
Sbjct: 437 KFDKAFQLIKEMM-RKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTY 495
Query: 161 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 220
T L+ + A E+A+ LFE ++ S + Y ++ Y+ QV + + +
Sbjct: 496 TILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVD 555
Query: 221 KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM--SCDSGGSDDW-------------VK 265
P+ TY + NI + + ++ + DS SD + V
Sbjct: 556 AGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVT 615
Query: 266 YVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 325
Y LV+ + +H V+ L S + I YD LI + G D +++ L
Sbjct: 616 YGALVD-GLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF--L 672
Query: 326 RMTKQKM--TSRNYICILSSYLMLGHLKEVGEIIDQW-KQSATSDFDISACNRLLGAFSD 382
+MTK + Y ++ G L +++ Q K S T ++ ++
Sbjct: 673 QMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTP--NVVTYTAMIDGLCR 730
Query: 383 VGLTEKANEFHMLLLQKNCAP 403
+G +EKA + L+ +K C+P
Sbjct: 731 IGESEKALKLLSLMEEKGCSP 751
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 96/247 (38%), Gaps = 21/247 (8%)
Query: 176 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
AE+++ + +N N + VG+ +K +++E+ RK VPD TY+ I+
Sbjct: 406 AEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVIT 465
Query: 236 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI- 294
+++ EM G + D Y L++ + A + A+ L E +S+
Sbjct: 466 FLCHATKVEKAFLLFQEMKM-VGVTPDVYTYTILIDSFCKAGLIEQAQ--WLFEEMRSVG 522
Query: 295 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 354
+TY LI Y + + I+ + + Y ++ G++ +
Sbjct: 523 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 582
Query: 355 EIIDQW---KQSATSDFDISACNR--------LLGAFSDVGLTE--KANEFHMLL---LQ 398
E+ + SA SDF +R GA D GL + K + H LL L
Sbjct: 583 EVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVD-GLCKAHKVDHAHELLDAMLS 641
Query: 399 KNCAPTN 405
C P +
Sbjct: 642 SGCEPNH 648
>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 889
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 102/220 (46%), Gaps = 18/220 (8%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
T T+ +++ + +A +LF+ +K+ S NA+MYN +M Y+ + ++++ ++
Sbjct: 334 PTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANML 393
Query: 215 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274
EE+++K + PD T+N+ +S + + L ++S D +L +I +
Sbjct: 394 YEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDR-----SLFDISV 448
Query: 275 T----ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 330
+ A L A + EK ++ I ++ +I Y+ G +DK + +K M
Sbjct: 449 SGLCWAGRLDEAMEFLMDMLEKGLSP-SIIAFNSVIAAYSQAGLEDKAFEAYK--LMVHF 505
Query: 331 KMTSRNYICILSSYLML----GHLKEVGEIIDQWKQSATS 366
+T C SS LM G L+E E+I Q + S
Sbjct: 506 GLTPSPSTC--SSLLMGLSINGRLQEATELIGQMIEKGLS 543
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
++A + + E+A +F + + L N YN ++ + G++ + AL +E++
Sbjct: 583 AFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNE-ALKLEKV 641
Query: 219 KR-KNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
R + ++PDIFT N+ I C + F+D +G S D + Y L+N Y A
Sbjct: 642 MRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQ--TGLSPDIITYNTLINGYCKA 699
Query: 277 SHLVNAES 284
+VNA++
Sbjct: 700 FDMVNADN 707
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 47/249 (18%), Positives = 100/249 (40%), Gaps = 3/249 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T++ ++ + E L + + + NA YN ++ G+ +
Sbjct: 268 TFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLM 327
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ P + T+N I++ N+ + +K D + + G S + + Y L+N Y+
Sbjct: 328 IERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLK-EMGFSPNAIMYNTLMNGYVKMRE 386
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
++ + E K IT++ L+ + G ++ D++ K + + +
Sbjct: 387 -IDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFD 445
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
+S G L E E + + S I A N ++ A+S GL +KA E + L++
Sbjct: 446 ISVSGLCWAGRLDEAMEFLMDMLEKGLSP-SIIAFNSVIAAYSQAGLEDKAFEAYKLMVH 504
Query: 399 KNCAPTNAS 407
P+ ++
Sbjct: 505 FGLTPSPST 513
>gi|357448559|ref|XP_003594555.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483603|gb|AES64806.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 5/162 (3%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
+ Y ++L + +A +L R + ++ + +MYN + T + QV + + E+
Sbjct: 396 DAYMSMLESLCSSGKIAEAIDLLNRFHEKCITTDTIMYNTVFTALGRLKQVSHIHDLYEK 455
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
+K+ PDIFTYN+ ISS +D K +E+ +S D + Y +L+N + +
Sbjct: 456 MKQDGPPPDIFTYNILISSYGRAGRVDSAVKIFEELE-NSNCQPDVISYNSLINC-LGKN 513
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID 319
V+ E ++ +TY LI + G DK++
Sbjct: 514 GDVDEAHMRFKEMQEKGLNPDVVTYSTLIECF---GKTDKVE 552
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+ Y A + A ++FE ++ SN + + YN ++ G V++ + +E+
Sbjct: 467 TYNILISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINCLGKNGDVDEAHMRFKEM 526
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 266
+ K + PD+ TY+ I T ++ DEM + G S + V Y
Sbjct: 527 QEKGLNPDVVTYSTLIECFGKTDKVEMACSLFDEMIAE-GCSPNLVTY 573
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 86/212 (40%), Gaps = 6/212 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y LL Y + +KA ++ + + S + +N ++ +V+K V E++
Sbjct: 190 SYKCLLQGYLRLRDCDKAFGVYLDMLRCGYSLDIFAFNMLLDALAKDQKVDKAYKVFEDM 249
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
KR++ PD FTY + I D+ M + G + + + Y ++ +
Sbjct: 250 KRRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAM-LEKGFTLNLIAYNTMIEA-LAKGR 307
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ + + ++ Q TY L+ + G +K+D I + M+K+ M + Y
Sbjct: 308 MADKAVLLFSKMVENGCQPNEFTYSVLLNVLVAEGQLNKLDNI---VEMSKKYMNKQIYA 364
Query: 339 CILSSYLMLGHLKEVGEII-DQWKQSATSDFD 369
+ + LGH E + + W D D
Sbjct: 365 YFVRTLSKLGHSSEAHRLFCNMWNVHDKGDKD 396
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 104/254 (40%), Gaps = 24/254 (9%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT ++ + A T+++ LF+ + + + N + YN M+ +K L+ ++
Sbjct: 260 TYTIMIRMTGKAGKTDESLALFQAMLEKGFTLNLIAYNTMIEALAKGRMADKAVLLFSKM 319
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
P+ FTY++ ++ A ++++ + EMS KY+N IY ++
Sbjct: 320 VENGCQPNEFTYSVLLNVLVAEGQLNKLDNIV-EMS---------KKYMN-KQIY---AY 365
Query: 279 LVNAESSTLVEAE-KSITQRQWITY-----DFLIILYAGLGNKDKIDQIWKSLRMTKQKM 332
V S +E + W + D + + L + KI + L +K
Sbjct: 366 FVRTLSKLGHSSEAHRLFCNMWNVHDKGDKDAYMSMLESLCSSGKIAEAIDLLNRFHEKC 425
Query: 333 TSRNYICILSSYLMLGHLKEVGEIIDQW---KQSATSDFDISACNRLLGAFSDVGLTEKA 389
+ + I + + LG LK+V I D + KQ DI N L+ ++ G + A
Sbjct: 426 ITTDTIMYNTVFTALGRLKQVSHIHDLYEKMKQDGPPP-DIFTYNILISSYGRAGRVDSA 484
Query: 390 NEFHMLLLQKNCAP 403
+ L NC P
Sbjct: 485 VKIFEELENSNCQP 498
>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
Length = 1263
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/333 (18%), Positives = 130/333 (39%), Gaps = 28/333 (8%)
Query: 54 GKDDLKSRIFRISLPKRSATNVIQRWVS-EGNQATVSELRHILKELRKSQRYKHALEISE 112
G+ ++ R +R+A +VI S +G + R ++ R +Q + E
Sbjct: 164 GRARVQPRAPPPCDERRAAEDVIHALRSADGPAEALERFRSAARKPRVAQTTASCNYMLE 223
Query: 113 WMVTHKEFVLSDSDYATRIDLMTK------------VFGIHSGERYFEGLPLSAKTSE-- 158
M H D A D+M + +FG E P++ +
Sbjct: 224 LMRGHGRV----GDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEA 279
Query: 159 -------TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 211
TY L++ + + +A E++ + + + Y+ +M + VE V
Sbjct: 280 GIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETV 339
Query: 212 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
++ E++ V P++++Y + I D+ + L +M + G D + + L+
Sbjct: 340 LWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKME-NEGCKPDVITHTVLIQ 398
Query: 272 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 331
+ A + +A+ + +KS + +TY L+ + G+ + +IW +++
Sbjct: 399 VLCDAGRISDAK-DVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYN 457
Query: 332 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
Y ++ + +G + E E+ D+ KQ
Sbjct: 458 DNVVAYTAVIDALCQVGRVFEALEMFDEMKQKG 490
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 107/266 (40%), Gaps = 23/266 (8%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLS 153
+L + KS R + L++ E M H++ S T + T + G+ R + + L
Sbjct: 921 LLDAMGKSMRIEEMLKVQEEM--HRKGYES-----TYVTYNTIISGLVKSRRLEQAIDLY 973
Query: 154 --------AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSV 205
+ T TY LL A E AE LF + + N +YN ++ +
Sbjct: 974 YNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIA 1033
Query: 206 GQVEKVALVVEEIKRKNVVPDIFTYNLWISS-CAATLNIDQVKKF--LDEMSCDSGGSDD 262
G EKV + +++ + + PDI +Y + I + C A D + F L EM G D
Sbjct: 1034 GNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEM----GLEPD 1089
Query: 263 WVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 322
+ Y NL+ + S + S E +K TY+ LI+ G + +++
Sbjct: 1090 LITY-NLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMY 1148
Query: 323 KSLRMTKQKMTSRNYICILSSYLMLG 348
+ L K Y ++ Y + G
Sbjct: 1149 EELLTKGWKPNVFTYNALIRGYSVSG 1174
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 108/239 (45%), Gaps = 13/239 (5%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT ++ + A ++A ++F + ++N + L N ++ G+ ++ + ++
Sbjct: 602 TYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQL 661
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K N+ P TYN ++ + +V L+EM S + + Y +++
Sbjct: 662 KEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMY-HSNYPPNLITYNTILDCLCK--- 717
Query: 279 LVNAESSTLVEAEKSITQRQWIT--YDFLIILYAGLGNKDKIDQIWKSL-RMTKQKMTSR 335
N + ++ S+T + I + ++Y GL +++ ++ + +M K +
Sbjct: 718 --NGAVNDALDMLYSMTTKGCIPDLSSYNTVIY-GLVKEERYNEAFSIFCQMKKVLIPDY 774
Query: 336 NYIC-ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLL-GAFSDVGLTEKANEF 392
+C IL S++ +G +KE II + S D S+C+ L+ G G+ EK+ EF
Sbjct: 775 ATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGI-EKSIEF 832
Score = 41.2 bits (95), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 2/120 (1%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 184
Y ID + K ++ G YF L + TY L+ +K E+A LF ++
Sbjct: 1058 YTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQ 1117
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
+ + N YN ++ G+ + + EE+ K P++FTYN I + + + D
Sbjct: 1118 KKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTD 1177
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Query: 175 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 234
+A EL ++ K +S +YN ++ + ++ + E+K PD FTYNL +
Sbjct: 863 EAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLL 922
Query: 235 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 282
+ ++ I+++ K +EM G +V Y +++ + + L A
Sbjct: 923 DAMGKSMRIEEMLKVQEEMH-RKGYESTYVTYNTIISGLVKSRRLEQA 969
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 89/208 (42%), Gaps = 10/208 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+T+L+ G E A EL E + + YN ++ Y QV K +V +
Sbjct: 359 TFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADF 418
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + VP+ TYN+ ++ C DQ ++LD+++ + G V + I +
Sbjct: 419 RSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAI----ILDAL 474
Query: 279 LVNAESSTLVEAEKSITQRQWI--TYDFLIILYAGLGNKDKIDQIWKSL-RMTKQKMTSR 335
+ + V+ + + QR ++ F +++A L + Q + L M K T
Sbjct: 475 CRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFA-LCKAHQPQQAHELLEEMIKYGHTPG 533
Query: 336 NYIC--ILSSYLMLGHLKEVGEIIDQWK 361
C ++S+Y G +++ E+ + +
Sbjct: 534 PGTCDAVVSAYCRAGMIQKADELASELR 561
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/254 (19%), Positives = 105/254 (41%), Gaps = 6/254 (2%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
A +++ + G A ++ L K +R A+ + VT + F Y+T I
Sbjct: 203 ARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVI 262
Query: 132 DLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFN 191
D + K + FE + A T+ TY +L+ Y A ++A L ++ N + +
Sbjct: 263 DGLCKAGRLRDAVDIFEEMS-CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPD 321
Query: 192 ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 251
+ Y +M+ + +G+++ + +++ + PD+ T+ + ++ + L+
Sbjct: 322 VITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLE 381
Query: 252 EMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAG 311
E++ G Y +V+ Y ++ + AE + +TY+ IL AG
Sbjct: 382 EIT-RRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVP-NTVTYN---ILVAG 436
Query: 312 LGNKDKIDQIWKSL 325
+ DQ + L
Sbjct: 437 CCRAGRTDQALQYL 450
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 120/317 (37%), Gaps = 52/317 (16%)
Query: 94 ILKELRKSQRYKHALEISEWM-VTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPL 152
++ L ++ R +HAL + M H L+ Y + ++K + + + + +
Sbjct: 121 VIGGLCRAGRLRHALGVYRQMNDAHPPDFLT---YTKLVHGLSKAGRLRDAVQVLQEM-V 176
Query: 153 SAK---TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV- 208
SA+ + T T ++ + A EL E + ++ NA+ Y+ ++ ++
Sbjct: 177 SARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLD 236
Query: 209 EKVALVVEEIKRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 267
E VAL++ E+ R+ PDI TY+ I C A D V F +EMSC
Sbjct: 237 EAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIF-EEMSC------------ 283
Query: 268 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 327
ITY+ LI Y G+ D+ ++ +
Sbjct: 284 ----------------------------APTAITYNSLIGGYCRAGDMDEAIRLLGKMVD 315
Query: 328 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 387
Y ++S++ +G L + E+ Q + S D+ L+ G E
Sbjct: 316 DNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSP-DVVTFTSLVDGLCGEGRME 374
Query: 388 KANEFHMLLLQKNCAPT 404
A E + ++ C PT
Sbjct: 375 DALELLEEITRRGCPPT 391
>gi|302755512|ref|XP_002961180.1| hypothetical protein SELMODRAFT_21211 [Selaginella moellendorffii]
gi|300172119|gb|EFJ38719.1| hypothetical protein SELMODRAFT_21211 [Selaginella moellendorffii]
Length = 497
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 111/236 (47%), Gaps = 15/236 (6%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSN-LSFNALMYNEMMTLYMSVGQVEKVALVVE 216
E YT + K +A++L +++++ + L+ +++ +N ++ + + GQ+E+ VV+
Sbjct: 52 ECYTVAIAEVVAEKKMSEAQQLLKQMEEEDGLAPDSVCFNTVINGWCNEGQMEEAMRVVQ 111
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM---SCDSGGSDDWVKYVNLVNIY 273
E+++KN P TYN I +Q ++ + + + +S S+D ++ V N+
Sbjct: 112 EMRQKNCRPTTSTYNTLIKGYGVAGQAEQAQQLVLHLLNKTRNSPSSEDGLEPVARPNLR 171
Query: 274 ITASHLVNA--ESSTLVEAEKSIT-------QRQWITYDFLIILYAGLGNKDKIDQIWKS 324
T + L+NA L EA + + Q +TY+ L YA G +++ +
Sbjct: 172 -TMNTLLNAWCREGRLEEAWRVVAMIKSAGMQPDAVTYNTLAKAYAAAGRVAELEDLIAD 230
Query: 325 LRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAF 380
++ + K R Y ++S Y G + +++ + K D+ A N LL +
Sbjct: 231 MKNARLKPNLRTYAILISCYCQNGMPERGLQLLSRLKFEGLHP-DVVAFNTLLKGY 285
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 56/342 (16%), Positives = 130/342 (38%), Gaps = 20/342 (5%)
Query: 75 VIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLM 134
VI W +EG + E +++E+R+ + + + ++ + L+
Sbjct: 93 VINGWCNEGQ---MEEAMRVVQEMRQKNCRPTTSTYNTLIKGYGVAGQAEQAQQLVLHLL 149
Query: 135 TKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALM 194
K S E E P++ T LL+ + E+A + +K + + +A+
Sbjct: 150 NKTRNSPSSEDGLE--PVARPNLRTMNTLLNAWCREGRLEEAWRVVAMIKSAGMQPDAVT 207
Query: 195 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 254
YN + Y + G+V ++ ++ ++K + P++ TY + IS ++ + L +
Sbjct: 208 YNTLAKAYAAAGRVAELEDLIADMKNARLKPNLRTYAILISCYCQNGMPERGLQLLSRLK 267
Query: 255 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI-------------TQRQWIT 301
+ G D V + L+ Y+ + E ++ + + T
Sbjct: 268 FE-GLHPDVVAFNTLLKGYVEQQSSQQQQDFQSQENDQQLKLEMVLDLMAANGVRPDVTT 326
Query: 302 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 361
Y ++ ++ G DK I ++ + K R + + Y+ G E ++
Sbjct: 327 YSTIMNWWSSAGVADKAQTILLEMQQDRVKPDVRAFAILAKGYVRSGRTHEAESLLQDMS 386
Query: 362 QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
+ ++ ++ + +G + A L+L++ AP
Sbjct: 387 LHGVAP-NVVVYTTIISGWCSMGRMDDALRVLELMLERGEAP 427
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/258 (19%), Positives = 112/258 (43%), Gaps = 10/258 (3%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
A + + +L +Y T+ A +F+ + + + N ++ + G+
Sbjct: 153 AFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHY 212
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
V +++ R +VPD+F ++ +++ +D+ F+ +M + G + V Y +L+N Y
Sbjct: 213 VYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKME-NLGVEPNIVTYHSLINGY 271
Query: 274 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
++ + A+ +EK ++ R +TY LI G + K+D+ K LR +++
Sbjct: 272 VSLGDVEAAKGVLKFMSEKGVS-RNVVTYTLLI---KGYCKQCKMDEAEKVLRGMQEEAA 327
Query: 334 ----SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
R Y ++ Y G + + ++D+ + ++ CN L+ + G +A
Sbjct: 328 LVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKT-NLFICNSLINGYCKRGEIHEA 386
Query: 390 NEFHMLLLQKNCAPTNAS 407
++ N P + S
Sbjct: 387 EGVITRMVDWNLKPDSYS 404
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 136/341 (39%), Gaps = 19/341 (5%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDS-DYATR 130
A N+ + + EG + TV +LK L + + AL+I W + K V D Y+T
Sbjct: 421 AFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQI--WHLMMKXGVAPDEVGYSTL 478
Query: 131 IDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQSNL 188
+D + K+ ++ + K+ T+ ++ +AEE+F+++K
Sbjct: 479 LDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGC 538
Query: 189 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 248
S + + Y ++ Y V + V ++R+ + P I YN IS + + +
Sbjct: 539 SPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTD 598
Query: 249 FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIIL 308
L EM G + + V Y L++ + L A SS E ++ I +
Sbjct: 599 LLTEMGI-RGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICS----TM 653
Query: 309 YAGLGNKDKIDQIWKSLRMTKQKMTSRNYI----CILSSYLMLGHLKEVGEIIDQWKQSA 364
+GL +ID+ + QKM + C L S + ++++ + +D+ ++
Sbjct: 654 VSGLYRLGRIDEA----NLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTF 709
Query: 365 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 405
+I N + G + A F +L K P N
Sbjct: 710 LLPNNIVY-NIAIAGLCKTGKVDDARRFFSMLSLKGFVPDN 749
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 5/178 (2%)
Query: 98 LRKSQRYKHALEISEWM-VTHKEFVLSDSD-YATRIDLMTKVFGIHSGERYFEGLPLSAK 155
L+ RY +I++ + + K F+L ++ Y I + K + R+F L L
Sbjct: 686 LKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGF 745
Query: 156 TSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
+ TY L+H Y+ A ++A L + + + L N + YN ++ V++
Sbjct: 746 VPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQR 805
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
+ ++ +K + P++ TYN I N+D K D+M + G S V Y L+N
Sbjct: 806 LFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKM-IEEGISPSVVTYSALIN 862
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 58/112 (51%), Gaps = 1/112 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY AL++ ++ ++A+ LF ++ Q L N + YN ++ Y +G ++ + +++
Sbjct: 786 TYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKM 845
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 270
+ + P + TY+ I+ +I++ K L++M +G ++Y LV
Sbjct: 846 IEEGISPSVVTYSALINGLCKHGDIERSMKLLNQM-IKAGVDSKLIEYCTLV 896
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 93/231 (40%), Gaps = 2/231 (0%)
Query: 173 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 232
++A ++++ + N + Y+ ++ Y+S+G VE V++ + K V ++ TY L
Sbjct: 242 VDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTL 301
Query: 233 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 292
I +D+ +K L M ++ D Y L++ Y + +A L E +
Sbjct: 302 LIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDA-VRLLDEMLR 360
Query: 293 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 352
+ + LI Y G + + + + K S +Y +L Y GH E
Sbjct: 361 LGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSE 420
Query: 353 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
+ D+ Q + N LL VG + A + L+++ AP
Sbjct: 421 AFNLCDKMLQEGIEP-TVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAP 470
>gi|302805861|ref|XP_002984681.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
gi|300147663|gb|EFJ14326.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
Length = 651
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 106/250 (42%), Gaps = 3/250 (1%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
T ETYT++L Y +KA E+F+R+K + L + YN +++ Q+E L++
Sbjct: 394 TIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLML 453
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275
E+ VVP Y A T ++++ M ++ + D V Y L+
Sbjct: 454 NEMLANGVVPSERIYTALTEGYARTGDVEKAFGVFQRMKKEN-LAIDIVAYGALLKACCN 512
Query: 276 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
+ + A + + Q L YA G ++ +++ ++ K +
Sbjct: 513 SGAMHGAAEVFQQITDAGLKHNQITYCTMLDGAYARAGRVEEAEELVSAMERDGTKPDTL 572
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSAT--SDFDISACNRLLGAFSDVGLTEKANEFH 393
Y ++++Y + G +++ ++ + +S++ + DI N L+ ++ G +A E
Sbjct: 573 IYNSLINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPRAEELF 632
Query: 394 MLLLQKNCAP 403
L + P
Sbjct: 633 QGLARLKLVP 642
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 66/161 (40%), Gaps = 8/161 (4%)
Query: 101 SQRYKHALEI--SEWMVTHKEFVLSDSDYATRIDLMTKVFGIH----SGERYFEGLPLS- 153
+QR++ +EI W F + D L+ + H + FE + S
Sbjct: 102 AQRFRETMEIDAGNWHKIVNAFQVIDKPVLREYGLLVDFYARHGDKVAARATFEAMRASH 161
Query: 154 -AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVA 212
YT+L+H YA A+ E A E + + N ++ +++ Y S G E
Sbjct: 162 IKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAE 221
Query: 213 LVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
E+ K +N+VP YN + + N++ V+ L +M
Sbjct: 222 HWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQM 262
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 88/233 (37%), Gaps = 37/233 (15%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y L+H + A +KA + E ++ + L Y ++ Y+ G ++K V + IK
Sbjct: 363 YNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIK 422
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
+ P + +YN +S A ++ + L+EM L
Sbjct: 423 TAGLRPGVVSYNSLLSGLAKARQMENARLMLNEM-------------------------L 457
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 339
N +V +E+ Y L YA G+ +K +++ ++ + Y
Sbjct: 458 ANG----VVPSER--------IYTALTEGYARTGDVEKAFGVFQRMKKENLAIDIVAYGA 505
Query: 340 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
+L + G + E+ Q + I+ C L GA++ G E+A E
Sbjct: 506 LLKACCNSGAMHGAAEVFQQITDAGLKHNQITYCTMLDGAYARAGRVEEAEEL 558
>gi|449484944|ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g16010-like [Cucumis sativus]
Length = 637
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY+AL+ + + + A LF+ +K++ L +Y ++ +Y + +VE +VEE+
Sbjct: 232 TYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEM 291
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K K P +FTY I +D M D G D V NL+NI A
Sbjct: 292 KGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKD-GCKPDVVLINNLINILGRAGR 350
Query: 279 LVNA 282
L +A
Sbjct: 351 LEDA 354
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 7/173 (4%)
Query: 151 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 210
P S +E ++ +L + AK KA +F ++K + A +YN ++ + M G EK
Sbjct: 154 PCSVGPAE-WSEILKILGKAKMVNKALSVFYQIKGRKCNPTATVYNTLILMLMHEGHHEK 212
Query: 211 VALVVEEI-KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
+ + EI N PD TY+ IS+ D + DEM ++G Y +
Sbjct: 213 IHELYNEICSEGNCSPDTITYSALISAFGKLERYDFAFRLFDEMK-ENGLHPTEKIYTTI 271
Query: 270 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 322
+ +Y + V A + E + TY LI GLG ++D +
Sbjct: 272 LAMYFKLNK-VEAALRLVEEMKGKGCAPTVFTYTELI---KGLGKVGRVDDAY 320
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 58/123 (47%), Gaps = 5/123 (4%)
Query: 148 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 207
+G P Y +L+ AK E A ELF+ +K++ +A +Y M+ + + G+
Sbjct: 435 KGFP---PCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGR 491
Query: 208 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 267
+ + E ++ PD++TYN +S ID+ + M ++G + D +K
Sbjct: 492 LSDAVDLFCEXEKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMR-ENGCTPD-IKSH 549
Query: 268 NLV 270
N++
Sbjct: 550 NII 552
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 84/210 (40%), Gaps = 3/210 (1%)
Query: 180 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 239
FE++K + ++ ++ Y ++ + +VEK L++EE+ K P Y I S
Sbjct: 394 FEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGR 453
Query: 240 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 299
+ + E+ + G S V Y ++ + L +A E EK
Sbjct: 454 AKRYEAANELFQELKENCGRSSARV-YAVMIKHFGNCGRLSDA-VDLFCEXEKLGCSPDV 511
Query: 300 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 359
TY+ L+ G D+ + +++R +++ IL+ G K E+ +
Sbjct: 512 YTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTK 571
Query: 360 WKQSATSDFDISACNRLLGAFSDVGLTEKA 389
K+S D + N +L S G+ E A
Sbjct: 572 MKESEIMP-DAVSYNTILSCLSRAGMFEMA 600
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/313 (20%), Positives = 126/313 (40%), Gaps = 6/313 (1%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDS-DYATRIDLMTKVFGIHSGERYFEGLPL 152
+LK L ++ A E+ M L ++ Y T ID K ++ F +
Sbjct: 185 VLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQ 244
Query: 153 SAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 210
+ + TY +++ A+ +KAE + ++ + + YN ++ Y S GQ ++
Sbjct: 245 RGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKE 304
Query: 211 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 270
V +++ + ++PD+ T N ++S I + D M+ G D Y ++
Sbjct: 305 AVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAM-KGQKTDIFSYKIML 363
Query: 271 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 330
N Y T LV+ + I I ++ LI YA G D+ I+ +R
Sbjct: 364 NGYATKGCLVDLTELFNLMLSDGIAPDSHI-FNVLIKAYAKCGMLDRATIIFNEMREQGV 422
Query: 331 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 390
+ Y ++++ +G + + E +Q + IS + L+ F G KA
Sbjct: 423 EPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAP-SISTYHFLIQGFCTHGDLLKAK 481
Query: 391 EFHMLLLQKNCAP 403
+ + ++ K P
Sbjct: 482 DLVLQMMNKGMRP 494
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 103/238 (43%), Gaps = 15/238 (6%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSF--NALMYNEMMTLYMSVGQVEKVALVVE 216
+Y +L + + +A+EL + + NA+ YN ++ + G V K +
Sbjct: 181 SYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFN 240
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
E+ ++ + PD+ TYN +++ +D+ + L +M D+W Y +L+ Y +
Sbjct: 241 EMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWT-YNSLIYGYSST 299
Query: 277 SHLVNAESSTLVEAEKSITQRQWITYDFLII--LYAGLGNKDKID---QIWKSLRMTKQK 331
A V K +T Q I D + + L A L KI ++ S+ M QK
Sbjct: 300 GQWKEA-----VRVSKKMTS-QGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQK 353
Query: 332 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
+Y +L+ Y G L ++ E+ + + D N L+ A++ G+ ++A
Sbjct: 354 TDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAP-DSHIFNVLIKAYAKCGMLDRA 410
>gi|242064536|ref|XP_002453557.1| hypothetical protein SORBIDRAFT_04g008050 [Sorghum bicolor]
gi|241933388|gb|EES06533.1| hypothetical protein SORBIDRAFT_04g008050 [Sorghum bicolor]
Length = 390
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 77/166 (46%), Gaps = 13/166 (7%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
+ + ++L A+ T +A +L + + ++ + MYN + + + QV ++ + ++
Sbjct: 148 DAFVSMLEALCNAEKTAEAIDLLHMMPEKGITTDVGMYNIIFSALGKLKQVSFMSSLYDK 207
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
+K V PD+FTYN+ ISS +D+ + +EM DS D + Y +++N
Sbjct: 208 MKANGVAPDVFTYNIMISSFGRVGLVDKASELFEEMD-DSSCKPDVITYNSMINCL---- 262
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL----GNKDKID 319
++ L EA Q YD + Y+ L G +K+D
Sbjct: 263 ----GKNGDLDEAHMLFKDMQEKGYDPDVFTYSILIECFGKSNKVD 304
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 47/95 (49%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY ++ + +KA ELFE + S+ + + YN M+ G +++ ++ +++
Sbjct: 219 TYNIMISSFGRVGLVDKASELFEEMDDSSCKPDVITYNSMINCLGKNGDLDEAHMLFKDM 278
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
+ K PD+FTY++ I + +D DEM
Sbjct: 279 QEKGYDPDVFTYSILIECFGKSNKVDMACSLFDEM 313
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 103/256 (40%), Gaps = 28/256 (10%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT L+ + A K E + N + YN ++ V+K ++ ++
Sbjct: 12 TYTILIRMSGKAGKATKFVSFLEEMVSKGCVLNLIAYNTVIEALGKNKMVDKAIFMLSKM 71
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ P+ FTY++ + A + ++ + LD S G + Y LV + H
Sbjct: 72 IESDCQPNQFTYSIMLDVLATGGQLHRLNEILDICS----GHLNRSVYSYLVKALCKSGH 127
Query: 279 LVNAESSTLVEAEKSITQRQWITY-----DFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
A S+ R W ++ D + + L N +K + L M +K
Sbjct: 128 ASEAH---------SVFCRMWSSHEKGDRDAFVSMLEALCNAEKTAEAIDLLHMMPEKGI 178
Query: 334 SRN---YICILSSYLMLGHLKEV---GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 387
+ + Y I S+ LG LK+V + D+ K + + D+ N ++ +F VGL +
Sbjct: 179 TTDVGMYNIIFSA---LGKLKQVSFMSSLYDKMKANGVAP-DVFTYNIMISSFGRVGLVD 234
Query: 388 KANEFHMLLLQKNCAP 403
KA+E + +C P
Sbjct: 235 KASELFEEMDDSSCKP 250
>gi|115436822|ref|NP_001043145.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|56201654|dbj|BAD73118.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113532676|dbj|BAF05059.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|125570544|gb|EAZ12059.1| hypothetical protein OsJ_01942 [Oryza sativa Japonica Group]
Length = 540
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 102/226 (45%), Gaps = 13/226 (5%)
Query: 153 SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVA 212
S + +T+ ++ YA A+ ++A E FE++ L + YN ++ + QV+K
Sbjct: 184 SCLSKDTFKIIVRRYARARKVKEAVETFEKMSSFGLKTDLSDYNWLIDILSKSKQVKKAH 243
Query: 213 LVVEEIKRKN-VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
+ +E+KRK +PD+ TY + + ++ +K EM D+G D V Y L++
Sbjct: 244 AIFKEMKRKGRFIPDLKTYTVLMEGWGHEKDLLMLKAVYQEM-LDAGIKPDVVAYGMLIS 302
Query: 272 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ- 330
+ + A E E+S Y LI GLG+ +++D+ K +++K+
Sbjct: 303 AFCKSGKCDEA-IKVFHEMEESGCMPSPHVYCMLI---NGLGSMERLDEALKYFQLSKES 358
Query: 331 --KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA----TSDFDI 370
M ++ +Y +++D+ ++S T +DI
Sbjct: 359 GFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDI 404
>gi|356574710|ref|XP_003555488.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Glycine max]
Length = 821
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 111/254 (43%), Gaps = 39/254 (15%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+YT+L+H+ A A A+ ++++++ L + + Y +++ + +GQ+E + E+
Sbjct: 526 SYTSLIHILASADQPHIAKPYLKKMQEAGLVSDCIPYCAVISSFAKLGQLEMTEDIYREM 585
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
R V PD+ + + I+ + + + ++DEM +G + V Y +L+ +Y +
Sbjct: 586 IRHGVQPDVIVHGILINVFSDAGRVKEAIGYVDEMK-KAGLPGNTVIYNSLIKLYAKIDN 644
Query: 279 LVNAESS--------------------------TLVEAEKSITQR-------QWITYDFL 305
L A+ + ++V+ K I + T+ +
Sbjct: 645 LEKAKEAYKLLQLSDEGPGVYSSNCMIDLYVKRSMVDQAKEIFETLKKNGAANEFTFAMM 704
Query: 306 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 365
+ LY + D+ QI K +R +T +Y +L Y + G KE I+ +K+
Sbjct: 705 LCLYKKIERFDEAIQIAKQIRKLG-PLTDLSYNNVLDLYAIAGRPKEA---IETFKEMVR 760
Query: 366 SDFDISACN-RLLG 378
+ ++ C+ R LG
Sbjct: 761 ASIQVNDCSLRSLG 774
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 15/132 (11%)
Query: 131 IDLMTKVFGIHSGERYFE----GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQS 186
+ L K GE +F G PL +K+ + + EL ERV +
Sbjct: 224 VQLYKKAGEFQKGEEFFRKWSSGKPLRSKSKPLRSN--------DNVVASPELDERVACA 275
Query: 187 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 246
N SF + YN ++ Y GQ+++ + E+ ++ V P T+N I+ C +++V
Sbjct: 276 NASFGSHTYNTLIDTYGKAGQLKEASQTFVEMLKQGVAPTTVTFNTMINICGNHGRLEEV 335
Query: 247 K---KFLDEMSC 255
+ ++E+ C
Sbjct: 336 SLLVRKMEELRC 347
>gi|125526112|gb|EAY74226.1| hypothetical protein OsI_02107 [Oryza sativa Indica Group]
Length = 540
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 102/226 (45%), Gaps = 13/226 (5%)
Query: 153 SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVA 212
S + +T+ ++ YA A+ ++A E FE++ L + YN ++ + QV+K
Sbjct: 184 SCLSKDTFKIIVRRYARARKVKEAVETFEKMSSFGLKTDLSDYNWLIDILSKSKQVKKAH 243
Query: 213 LVVEEIKRKN-VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
+ +E+KRK +PD+ TY + + ++ +K EM D+G D V Y L++
Sbjct: 244 AIFKEMKRKGRFIPDLKTYTVLMEGWGHEKDLLMLKAVYQEM-LDAGIKPDVVAYGMLIS 302
Query: 272 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ- 330
+ + A E E+S Y LI GLG+ +++D+ K +++K+
Sbjct: 303 AFCKSGKCDEA-IKVFHEMEESGCMPSPHVYCMLI---NGLGSMERLDEALKYFQLSKES 358
Query: 331 --KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA----TSDFDI 370
M ++ +Y +++D+ ++S T +DI
Sbjct: 359 GFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDI 404
>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Cucumis sativus]
Length = 637
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY+AL+ + + + A LF+ +K++ L +Y ++ +Y + +VE +VEE+
Sbjct: 232 TYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEM 291
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K K P +FTY I +D M D G D V NL+NI A
Sbjct: 292 KGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKD-GCKPDVVLINNLINILGRAGR 350
Query: 279 LVNA 282
L +A
Sbjct: 351 LEDA 354
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 7/173 (4%)
Query: 151 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 210
P S +E ++ +L + AK KA +F ++K + A +YN ++ + M G EK
Sbjct: 154 PCSVGPAE-WSEILKILGKAKMVNKALSVFYQIKGRKCNPTATVYNTLILMLMHEGHHEK 212
Query: 211 VALVVEEI-KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
+ + EI N PD TY+ IS+ D + DEM ++G Y +
Sbjct: 213 IHELYNEICSEGNCSPDTITYSALISAFGKLERYDFAFRLFDEMK-ENGLHPTEKIYTTI 271
Query: 270 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 322
+ +Y + V A + E + TY LI GLG ++D +
Sbjct: 272 LAMYFKLNK-VEAALRLVEEMKGKGCAPTVFTYTELI---KGLGKVGRVDDAY 320
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 5/123 (4%)
Query: 148 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 207
+G P Y +L+ AK E A ELF+ +K++ +A +Y M+ + + G+
Sbjct: 435 KGFP---PCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGR 491
Query: 208 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 267
+ + E+K+ PD++TYN +S ID+ + M ++G + D +K
Sbjct: 492 LSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMR-ENGCTPD-IKSH 549
Query: 268 NLV 270
N++
Sbjct: 550 NII 552
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/143 (20%), Positives = 62/143 (43%), Gaps = 3/143 (2%)
Query: 100 KSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLP--LSAKTS 157
K+ R + AL + E M K F + Y + ID + + + F+ L ++
Sbjct: 418 KTNRVEKALLLLEEM-DEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSA 476
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
Y ++ + A +LF +K+ S + YN +M+ + G +++ ++
Sbjct: 477 RVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRN 536
Query: 218 IKRKNVVPDIFTYNLWISSCAAT 240
++ PDI ++N+ ++ A T
Sbjct: 537 MRENGCTPDIKSHNIILNGLAKT 559
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 84/210 (40%), Gaps = 3/210 (1%)
Query: 180 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 239
FE++K + ++ ++ Y ++ + +VEK L++EE+ K P Y I S
Sbjct: 394 FEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGR 453
Query: 240 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 299
+ + E+ + G S V Y ++ + L +A E +K
Sbjct: 454 AKRYEAANELFQELKENCGRSSARV-YAVMIKHFGNCGRLSDA-VDLFCEMKKLGCSPDV 511
Query: 300 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 359
TY+ L+ G D+ + +++R +++ IL+ G K E+ +
Sbjct: 512 YTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTK 571
Query: 360 WKQSATSDFDISACNRLLGAFSDVGLTEKA 389
K+S D + N +L S G+ E A
Sbjct: 572 MKESEIMP-DAVSYNTILSCLSRAGMFEMA 600
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 125/327 (38%), Gaps = 45/327 (13%)
Query: 70 RSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYAT 129
+ A ++ + EG V ++ L K K A+E+ + M+T
Sbjct: 312 KHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD----------- 360
Query: 130 RIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLS 189
+ + TY L+ E+A EL + +
Sbjct: 361 -----------------------CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGIL 397
Query: 190 FNALMYNEMMTLYMSVGQVEKVAL-VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 248
+ +N ++ + + + +VA+ + EE++ K PD FTYN+ I S + +D+
Sbjct: 398 PDVCTFNSLIQ-GLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALN 456
Query: 249 FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIIL 308
L +M SG + + Y L++ + A+ AE E E R +TY+ LI
Sbjct: 457 MLKQMEL-SGCARSVITYNTLIDGFCKANKTREAE-EIFDEMEVHGVSRNSVTYNTLI-- 512
Query: 309 YAGLGNKDKID---QIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 365
GL +++ Q+ + M QK Y +L+ + G +K+ +I+ Q S
Sbjct: 513 -DGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIV-QAMTSNG 570
Query: 366 SDFDISACNRLLGAFSDVGLTEKANEF 392
+ DI L+ G E A++
Sbjct: 571 CEPDIVTYGTLISGLCKAGRVEVASKL 597
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 98/245 (40%), Gaps = 3/245 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +++ ++A E+ +++ + S N + YN +++ QVE+ + +
Sbjct: 332 TYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVL 391
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K ++PD+ T+N I T N + +EM G D Y L++ +
Sbjct: 392 TSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR-SKGCEPDEFTYNMLIDSLCSKGK 450
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L A + L + E S R ITY+ LI + + ++I+ + + S Y
Sbjct: 451 LDEA-LNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYN 509
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
++ +++ +++DQ D N LL F G +KA + +
Sbjct: 510 TLIDGLCKSRRVEDAAQLMDQMIMEGQKP-DKYTYNSLLTHFCRGGDIKKAADIVQAMTS 568
Query: 399 KNCAP 403
C P
Sbjct: 569 NGCEP 573
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 53/126 (42%), Gaps = 2/126 (1%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVK 184
Y T ID K E F+ + + ++ S TY L+ ++ E A +L +++
Sbjct: 473 YNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMI 532
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
+ YN ++T + G ++K A +V+ + PDI TY IS ++
Sbjct: 533 MEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVE 592
Query: 245 QVKKFL 250
K L
Sbjct: 593 VASKLL 598
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 39/209 (18%), Positives = 87/209 (41%), Gaps = 4/209 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+ L++ A + A E+ + + Q + YN +++ +G+V++ V++++
Sbjct: 297 TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 356
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV-NIYITAS 277
++ P+ TYN IS+ +++ + L + G D + +L+ + +T +
Sbjct: 357 ITRDCSPNTVTYNTLISTLCKENQVEEATE-LARVLTSKGILPDVCTFNSLIQGLCLTRN 415
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
H V E E + TY+ LI G D+ + K + ++ + Y
Sbjct: 416 HRVAME--LFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITY 473
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSATS 366
++ + +E EI D+ + S
Sbjct: 474 NTLIDGFCKANKTREAEEIFDEMEVHGVS 502
>gi|159465707|ref|XP_001691064.1| predicted mitochondrial protein [Chlamydomonas reinhardtii]
gi|158279750|gb|EDP05510.1| predicted mitochondrial protein [Chlamydomonas reinhardtii]
Length = 630
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
S TY AL+ Y KA E+++ + + N+ + + Y+ +++ GQ E +
Sbjct: 208 STTYNALISAYGKTMQLGKALEVYQEMLRQNMERSVITYSSLISACEKAGQWETALRIFN 267
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
E+++ N VP+ TYN +++CA ++ + ++M+ G + D V Y L++ Y
Sbjct: 268 EMQQDNCVPNTVTYNSLVTACAQGGQWEKATEVFEQMTAH-GCTPDVVTYTALISAY 323
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 104/249 (41%), Gaps = 3/249 (1%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
+ T+TAL+++ A E++ ++ +N N + YN ++ +Y +G+ E+ V
Sbjct: 101 RNVHTFTALMNVCIKCGKLPLALEIYNNMRAANCMPNVVTYNTLVDVYGKLGRWERAIHV 160
Query: 215 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274
++ +K++ V P + TYN I +C + + D G + + Y L++ Y
Sbjct: 161 LDLMKQEGVEPVLRTYNTLIIACNMCNQPREALAVYQRLLSD-GYTPNSTTYNALISAYG 219
Query: 275 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 334
L A E + +R ITY LI G + +I+ ++ +
Sbjct: 220 KTMQLGKA-LEVYQEMLRQNMERSVITYSSLISACEKAGQWETALRIFNEMQQDNCVPNT 278
Query: 335 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 394
Y ++++ G ++ E+ +Q + D+ L+ A+ G +KA +
Sbjct: 279 VTYNSLVTACAQGGQWEKATEVFEQMTAHGCTP-DVVTYTALISAYERGGQWQKALQAFG 337
Query: 395 LLLQKNCAP 403
+ + C P
Sbjct: 338 KMCMQGCKP 346
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 47/248 (18%), Positives = 102/248 (41%), Gaps = 9/248 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+YTA + L ++ ++A EL ++Q N+ N + +M + + G++ + +
Sbjct: 70 SYTATISLCIYSQDVDRAMELMNEMRQRNIERNVHTFTALMNVCIKCGKLPLALEIYNNM 129
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ N +P++ TYN + ++ LD M + G + ++ N + I A +
Sbjct: 130 RAANCMPNVVTYNTLVDVYGKLGRWERAIHVLDLMKQE--GVEPVLRTYNTL---IIACN 184
Query: 279 LVNAESSTLVEAEKSITQ---RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
+ N L ++ ++ TY+ LI Y K ++++ + + +
Sbjct: 185 MCNQPREALAVYQRLLSDGYTPNSTTYNALISAYGKTMQLGKALEVYQEMLRQNMERSVI 244
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 395
Y ++S+ G + I ++ +Q ++ N L+ A + G EKA E
Sbjct: 245 TYSSLISACEKAGQWETALRIFNEMQQDNCVPNTVTY-NSLVTACAQGGQWEKATEVFEQ 303
Query: 396 LLQKNCAP 403
+ C P
Sbjct: 304 MTAHGCTP 311
Score = 41.2 bits (95), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 73/171 (42%), Gaps = 5/171 (2%)
Query: 69 KRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYA 128
R A V QR +S+G + ++ K+ + ALE+ + M+ + S Y+
Sbjct: 189 PREALAVYQRLLSDGYTPNSTTYNALISAYGKTMQLGKALEVYQEML-RQNMERSVITYS 247
Query: 129 TRIDLMTKVFGIHSGERYFEGLPL--SAKTSETYTALLHLYA-GAKWTEKAEELFERVKQ 185
+ I K + R F + + TY +L+ A G +W EKA E+FE++
Sbjct: 248 SLISACEKAGQWETALRIFNEMQQDNCVPNTVTYNSLVTACAQGGQW-EKATEVFEQMTA 306
Query: 186 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 236
+ + + Y +++ Y GQ +K ++ + PD YN I +
Sbjct: 307 HGCTPDVVTYTALISAYERGGQWQKALQAFGKMCMQGCKPDAIVYNAIIDT 357
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 124/335 (37%), Gaps = 32/335 (9%)
Query: 83 GNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSD--------------SDYA 128
G T HILK L + H I E + T K D D A
Sbjct: 38 GYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCKCPEDVALTVIKAYAKNSMPDQA 97
Query: 129 TRI-DLMTKVFGIHSGERYFEGLPLSAKTSETYTALLH-LYAGAKWTEKAEELFERVKQS 186
I M ++FG G R +Y +LL+ L KW E AE F +
Sbjct: 98 LDIFQRMHEIFGCQPGIR-------------SYNSLLNALIESNKWDE-AESFFLYFETM 143
Query: 187 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 246
LS N YN ++ + Q +K ++ + + PD+F+Y I+S A +
Sbjct: 144 GLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDA 203
Query: 247 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI 306
K DEM + G + D Y L++ + ++NA + +Y+ +I
Sbjct: 204 LKLFDEMP-ERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMI 262
Query: 307 ILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATS 366
G D+ +IW ++ ++ Y ++ G+L + + ++ S
Sbjct: 263 NGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVS 322
Query: 367 DFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 401
D+ N +L + G E+ E ++ ++ C
Sbjct: 323 P-DVVVYNTMLNGYLRAGRIEECLELWKVMEKEGC 356
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 135/346 (39%), Gaps = 49/346 (14%)
Query: 100 KSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSET 159
+ +++ A E+ WM + F Y T I+ + K + + F+ +P T +
Sbjct: 161 RKKQFDKAKELLNWM-WEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDV 219
Query: 160 --YTALLHLYAGAKWTEKAEELFERV-KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
Y L+ + A E++ER+ K ++ N YN M+ G+ ++ +
Sbjct: 220 ACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWH 279
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
+K+ D++TY+ I + N+D + EM+ ++G S D V Y ++N Y+ A
Sbjct: 280 RMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMA-ENGVSPDVVVYNTMLNGYLRA 338
Query: 277 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQ---IW----------- 322
+ E L + + R ++Y+ LI GL K+D+ IW
Sbjct: 339 GRI--EECLELWKVMEKEGCRTVVSYNILI---RGLFENAKVDEAISIWELLPEKDCCAD 393
Query: 323 ------------------KSLRMTKQKMTSRN------YICILSSYLMLGHLKEVGEIID 358
K+L + ++ R Y +++ G L EV ++D
Sbjct: 394 SMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLD 453
Query: 359 QWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 404
Q + + CN ++ F E A F ++ K C PT
Sbjct: 454 QMTKHGCKP-NPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPT 498
>gi|302794005|ref|XP_002978767.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
gi|300153576|gb|EFJ20214.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
Length = 521
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/316 (19%), Positives = 121/316 (38%), Gaps = 40/316 (12%)
Query: 109 EISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGL--PLSAKTSETYTALLHL 166
++ EW++ F Y ID K I E+ F + L ET+ L++
Sbjct: 89 QMCEWVLQGTAFRPDLGCYNLLIDAYGKSLNIEDAEKTFNRMQEALCVPNEETFGVLING 148
Query: 167 YAGAKWTEKAEELFERVKQSNLSFNALM-------------------------------- 194
Y A EKAEELF ++++ S L
Sbjct: 149 YRLAGSFEKAEELFVQMQKRGYSPGPLACNTFLHVLEDAKEYRRAEALFRDLEKYECEPN 208
Query: 195 ---YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 251
YN M+ +Y G+ K ++ ++R P+I T+ +++ A + +++ D
Sbjct: 209 IDTYNRMIVIYGKAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFD 268
Query: 252 EMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAG 311
++ + D Y L+ Y A +++ ++++ LI Y
Sbjct: 269 KLQ-EFDYKPDHYAYNALMEAYSQGGSPAGA-LEIFQTMQRNGCFPDTVSHNILINAYGR 326
Query: 312 LGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDIS 371
G + ++I+KS++ ++ + +LS+Y G ++E E++ ++ T D
Sbjct: 327 AGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKP-DTL 385
Query: 372 ACNRLLGAFSDVGLTE 387
N L+ A+ G E
Sbjct: 386 IYNALINAYGVSGRHE 401
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 103/247 (41%), Gaps = 8/247 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+TAL++ +A +AE F+++++ + + YN +M Y G + + +
Sbjct: 246 TFTALMNAFARQGLYREAERYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTM 305
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+R PD ++N+ I++ + +K M +G S + + L++ Y A
Sbjct: 306 QRNGCFPDTVSHNILINAYGRAGLYEDAEKIFKSMQ-SAGFSPNLKSNMLLLSAYARAGR 364
Query: 279 LVNAESSTLVEA-EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN- 336
+ AE LV A E+ T+ + Y+ LI Y G + ++ + + + K T +
Sbjct: 365 VEEAEE--LVSAMERDGTKPDTLIYNALINAYGVSGRHEDMEALLAKMVKSSSKQTKPDI 422
Query: 337 --YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 394
Y ++ Y G + + E+ + D + L+G ++ L K
Sbjct: 423 GTYNTLIQVYAQAGFIPKAEELFQGLARLKLVP-DATTWTALMGGYAKKKLYRKCTSILK 481
Query: 395 LLLQKNC 401
+L+ C
Sbjct: 482 KMLESGC 488
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 49/255 (19%), Positives = 109/255 (42%), Gaps = 18/255 (7%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
+TY ++ +Y A KAE L+ ++++ N + +M + G + ++
Sbjct: 210 DTYNRMIVIYGKAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDK 269
Query: 218 IKRKNVVPDIFTYNLWI------SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
++ + PD + YN + S A L I Q + +G D V + L+N
Sbjct: 270 LQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTMQ-------RNGCFPDTVSHNILIN 322
Query: 272 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLII-LYAGLGNKDKIDQIWKSLRMTKQ 330
Y A +AE + ++ +S + + L++ YA G ++ +++ ++
Sbjct: 323 AYGRAGLYEDAEK--IFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGT 380
Query: 331 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT--SDFDISACNRLLGAFSDVGLTEK 388
K + Y ++++Y + G +++ ++ + +S++ + DI N L+ ++ G K
Sbjct: 381 KPDTLIYNALINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPK 440
Query: 389 ANEFHMLLLQKNCAP 403
A E L + P
Sbjct: 441 AEELFQGLARLKLVP 455
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+ +YA A + KAEELF+ + + L +A + +M Y K +++++
Sbjct: 424 TYNTLIQVYAQAGFIPKAEELFQGLARLKLVPDATTWTALMGGYAKKKLYRKCTSILKKM 483
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
D T + S+C + ++QV + ++ +
Sbjct: 484 LESGCRADAVTARVLFSACRSPEQVEQVTQLMESL 518
Score = 38.1 bits (87), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 78/217 (35%), Gaps = 36/217 (16%)
Query: 225 PDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES 284
PD+ YNL I + +LNI+ +K + M ++ + + L+N Y A AE
Sbjct: 102 PDLGCYNLLIDAYGKSLNIEDAEKTFNRMQ-EALCVPNEETFGVLINGYRLAGSFEKAEE 160
Query: 285 ----------------------------------STLVEAEKSITQRQWITYDFLIILYA 310
+ + EK + TY+ +I++Y
Sbjct: 161 LFVQMQKRGYSPGPLACNTFLHVLEDAKEYRRAEALFRDLEKYECEPNIDTYNRMIVIYG 220
Query: 311 GLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDI 370
G K + +++S+R + +++++ G +E D+ Q D
Sbjct: 221 KAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDKL-QEFDYKPDH 279
Query: 371 SACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
A N L+ A+S G A E + + C P S
Sbjct: 280 YAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVS 316
>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
Length = 676
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 89/420 (21%), Positives = 158/420 (37%), Gaps = 28/420 (6%)
Query: 3 ARSFFLGLRRASNTKIKNRPNSD------YECFFYSRF------LSSGSSQNECLDEETS 50
AR F G+ RA+ RP+ C RF L++ +Q CLD T
Sbjct: 163 AREAFDGMARAAG---GVRPDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATC 219
Query: 51 NSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEI 110
+ + FR + T++ +R G + + L + K A +
Sbjct: 220 TVVVRAFCRQGRFR------NVTDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHV 273
Query: 111 SEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA---KTSETYTALLHLY 167
E MV K + + + ID + K+ + R F L S+ TYT ++ Y
Sbjct: 274 LEEMVG-KGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGY 332
Query: 168 AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 227
+AE L R+ + L+ N Y ++ + G ++ ++ ++K + +P+I
Sbjct: 333 CKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNI 392
Query: 228 FTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTL 287
+TYN I I + K L M+ G D V Y L+ + H+ A
Sbjct: 393 YTYNAIIGGFCKKGKIQEAYKVL-RMATSQGLHLDKVTYTILITEHCKQGHITCALDLFK 451
Query: 288 VEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 347
AEKS TY +I +Y ++ Q++ T + Y +++ Y L
Sbjct: 452 QMAEKS-CHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRL 510
Query: 348 GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
G L ++ ++ Q I+ L+ + E+A +L K+ P + +
Sbjct: 511 GKLTSALKVFERMVQHGCLPDSITY-GALISSLCKESRLEEARALFETMLDKHLVPCDVT 569
>gi|357454999|ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
gi|357455013|ref|XP_003597787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355486828|gb|AES68031.1| Beta-D-galactosidase [Medicago truncatula]
gi|355486835|gb|AES68038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY+AL+ + + A LF+ +K++ L A +Y +M +Y +G+VE+ +V E+
Sbjct: 233 TYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEM 292
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + VP ++TY I + ++ M D G D V NL+NI +
Sbjct: 293 RMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKD-GCKPDVVLMNNLINILGRSDR 351
Query: 279 LVNA 282
L A
Sbjct: 352 LKEA 355
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 10/135 (7%)
Query: 109 EISEWMVTHKE--FVLSDSDYATRIDLMTKVFGIHSGERYFE-----GLPLSAKTSETYT 161
E S W+ K+ V S Y+ ID K + E G P Y
Sbjct: 390 EASSWLERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFP---PCPAAYC 446
Query: 162 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 221
+L++ AK E A ELF+ +K++ S + +Y M+ + G+ + + E+K+
Sbjct: 447 SLINSLGKAKRYEAANELFQELKENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKL 506
Query: 222 NVVPDIFTYNLWISS 236
+PD++ YN I+
Sbjct: 507 GCIPDVYAYNALITG 521
>gi|356551361|ref|XP_003544044.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 688
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 104/225 (46%), Gaps = 9/225 (4%)
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSF 190
+++ +K I + + F+G+ S + T+ AL+ YA EK EL +++++
Sbjct: 311 VEMYSKCQDIVAAQMAFDGV--SERDLPTWNALISGYARCNQAEKIRELHQKMRRDGFEP 368
Query: 191 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 250
N +N ++ Y+ Q + + E++ N+ PDI+T + +++C+ I + K+ +
Sbjct: 369 NVYTWNGIIAGYVENKQYDSAMQLFTEMQIANLRPDIYTVGIILAACSRLATIQRGKQ-V 427
Query: 251 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYA 310
S +G D LV++Y + I+ ++++ ++ YA
Sbjct: 428 HAYSIRAGHDSDVHIGAALVDMYAKC-----GDVKHCYRVYNMISNPNLVSHNAMLTAYA 482
Query: 311 GLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 355
G+ ++ +++ + +K + ++ +LSS + G L E+G
Sbjct: 483 MHGHGEEGIALFRRMLASKVRPDHVTFLAVLSSCVHAGSL-EIGH 526
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 108/242 (44%), Gaps = 7/242 (2%)
Query: 152 LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 211
S K++ +Y A++ Y KA+ELF+R++Q + + + +N M++ Y+ ++
Sbjct: 194 FSRKSAASYNAMIAGYWENGNLFKAKELFDRMEQEGVQKDRISWNSMISGYVDGSLFDEA 253
Query: 212 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
+ ++ ++ + PD FT ++ CA +I + K+ ++ G + + LV
Sbjct: 254 YSLFRDLLKEGIEPDSFTLGSVLAGCADMASIRRGKE-AHSLAIVRGLQSNSIVGGALVE 312
Query: 272 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 331
+Y +V A+ A +++R T++ LI YA +KI ++ + +R +
Sbjct: 313 MYSKCQDIVAAQM-----AFDGVSERDLPTWNALISGYARCNQAEKIRELHQKMRRDGFE 367
Query: 332 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 391
+ I++ Y+ ++ + Q A DI +L A S + ++ +
Sbjct: 368 PNVYTWNGIIAGYVENKQYDSAMQLFTEM-QIANLRPDIYTVGIILAACSRLATIQRGKQ 426
Query: 392 FH 393
H
Sbjct: 427 VH 428
>gi|357500061|ref|XP_003620319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495334|gb|AES76537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 496
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 88/206 (42%), Gaps = 2/206 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY++L+ Y K KA+ +F + Q ++ + YN ++ + + + + EE+
Sbjct: 256 TYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQSYNILINGFCKIKMTDAAMNLFEEM 315
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ ++P++ TYN I + I K +DEM D G D + Y +L++ + +H
Sbjct: 316 HCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMH-DRGQPPDIITYSSLLDA-LCKNH 373
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ + L + + Q TY LI G + I++ L + + Y
Sbjct: 374 PGDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQNIFEDLLVKGYNINVNTYT 433
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSA 364
++ + G E ++ + +++
Sbjct: 434 VMIHVFCNNGMFGEALAMLSKMEENG 459
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
++Y L++ + K T+ A LFE + + N + YN ++ G++ +V+E
Sbjct: 290 QSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDE 349
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
+ + PDI TY+ + + D+ L ++ D G + Y L+N
Sbjct: 350 MHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLK-DQGLQPNMYTYTILIN 402
>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
Length = 768
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 97/224 (43%), Gaps = 8/224 (3%)
Query: 171 KWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 230
KW EKAE+LF V + NA +N +M G+V + +++ + R +V PD+ +Y
Sbjct: 427 KW-EKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISY 485
Query: 231 NLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 290
N + T ID+ K LD M G D Y L++ Y A + +A S
Sbjct: 486 NTLVDGHCLTGRIDEAAKLLDVMV-SIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREML 544
Query: 291 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 350
K +T +TY+ ++ +G + +++ ++ ++K Y IL+ L
Sbjct: 545 MKGLTP-GVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNG---LCRN 600
Query: 351 KEVGEIIDQWKQSATSD--FDISACNRLLGAFSDVGLTEKANEF 392
V E ++ + D DI N ++GA G E A +
Sbjct: 601 NFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDL 644
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 136/328 (41%), Gaps = 43/328 (13%)
Query: 72 ATNVIQRWVSE-GNQATVSELRHILKELRKSQRYKHALEISEWMV-----THKEFVLSDS 125
AT+++ R + E G V +LK L +R + ALE+ M +H V++
Sbjct: 147 ATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVT-- 204
Query: 126 DYATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLY-AGAKWTEKAEELFER 182
Y T ID + K + + F+ + + TYT L+H Y + KW E ++ +
Sbjct: 205 -YTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVV-QMLQE 262
Query: 183 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 242
+ L + ++Y ++ G+ + + + + RK + P + Y + + A
Sbjct: 263 MSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGA 322
Query: 243 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI--TQRQWI 300
+ ++ FLD M +G S D + + N Y A+ + + EA ++QW+
Sbjct: 323 LSEMHSFLDLMV-RNGVSPDHHIFNIMFNAY--------AKKAMIDEAMHIFDKMRQQWL 373
Query: 301 T-----YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL----- 350
+ Y LI LG D D + K +M + +T ++ S L+ G
Sbjct: 374 SPGVVNYGALIDALCKLGRVD--DAVLKFNQMINEGVTPDIFV---FSSLVYGLCTVDKW 428
Query: 351 ----KEVGEIIDQWKQSATSDFDISACN 374
K E++DQ + + F+I CN
Sbjct: 429 EKAEKLFFEVLDQGIRLNAAFFNILMCN 456
>gi|224090111|ref|XP_002308939.1| predicted protein [Populus trichocarpa]
gi|222854915|gb|EEE92462.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/318 (19%), Positives = 132/318 (41%), Gaps = 43/318 (13%)
Query: 75 VIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLM 134
++ RWV + L +KE+ + +H++ + WM + +Y R D+
Sbjct: 89 LLNRWVGRFARKNFPLL---IKEITQKGSIEHSILVFRWMKNQR-------NYCARTDI- 137
Query: 135 TKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALM 194
Y ++ L+A WT++A LF +++ +A
Sbjct: 138 -------------------------YNMMIRLHARHNWTDQARGLFFEMQKWRCKPDAET 172
Query: 195 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 254
N ++ + GQ ++E++ +K + P TYN I++C ++ N + K +M+
Sbjct: 173 CNALINAHGRSGQWRWAMNIMEDMLQKAIPPSRSTYNNLINACGSSGNWREALKLCKKMT 232
Query: 255 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQ-WITYDFLIILYAGLG 313
++G D V + +++ Y T + A++ + E K R T + +I LG
Sbjct: 233 -ENGVGPDLVTHNIILSAYKTGAQY--AKALSYFELMKGTNIRPDTTTLNIIIYCLTKLG 289
Query: 314 NKDKIDQIWKSLRMTKQKMTSR--NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDIS 371
+K I+KS+R + + + I+ Y + G ++ + +I
Sbjct: 290 QYEKAIGIFKSMREKRAECHPDVVTFTSIIHLYSVNGQIENCRAVFSTMVAEGLKP-NIV 348
Query: 372 ACNRLLGAFSDVGLTEKA 389
+ N L+GA++ G+ ++A
Sbjct: 349 SYNTLMGAYASHGMNKEA 366
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 103/245 (42%), Gaps = 11/245 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y L+ YA ++A +F +K S L + + Y ++ Y Q +K V E +
Sbjct: 349 SYNTLMGAYASHGMNKEALSVFNAIKNSGLRPDVVSYTSLLNSYGRSQQPKKAREVFEMM 408
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
KR + P+I +YN I + + + + + L EM D G + V L+ S
Sbjct: 409 KRDKLKPNIVSYNAMIDAYGSNGLLAEAVEVLREMEQD-GIYPNAVSICTLLAACGRCSR 467
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
VN + L AE+ + I Y+ I Y +G +K +++S+R +K + +
Sbjct: 468 KVNIDV-VLQAAERRHIKLNTIAYNSAIGSYMNVGEFEKATSMYRSMRKSKVIPDAVTFT 526
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
++S + E E + S D I A+S +TE + F+ + +
Sbjct: 527 VLISGCCKMTKYCEALEFL-----SEMMDLKIPMTKE---AYSSGKITEAESMFNKMKMA 578
Query: 399 KNCAP 403
C+P
Sbjct: 579 -GCSP 582
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 91/224 (40%), Gaps = 8/224 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+T+++HLY+ E +F + L N + YN +M Y S G ++ V I
Sbjct: 314 TFTSIIHLYSVNGQIENCRAVFSTMVAEGLKPNIVSYNTLMGAYASHGMNKEALSVFNAI 373
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K + PD+ +Y ++S + + ++ + M D + V Y +++ Y +
Sbjct: 374 KNSGLRPDVVSYTSLLNSYGRSQQPKKAREVFEMMKRDK-LKPNIVSYNAMIDAYGSNGL 432
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L A L E E+ ++ L+ K ID + ++ K+ + Y
Sbjct: 433 LAEA-VEVLREMEQDGIYPNAVSICTLLAACGRCSRKVNIDVVLQAAERRHIKLNTIAYN 491
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQS------ATSDFDISACNRL 376
+ SY+ +G ++ + ++S T IS C ++
Sbjct: 492 SAIGSYMNVGEFEKATSMYRSMRKSKVIPDAVTFTVLISGCCKM 535
>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 79/172 (45%), Gaps = 2/172 (1%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
A + TY L+ KAE L ER+K+++++ +N +M + GQ++K
Sbjct: 244 ACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALS 303
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
+E++K + P + TYN+ IS + N V + + EM D G S V Y L+N +
Sbjct: 304 YLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREME-DRGISPSKVTYTILMNTF 362
Query: 274 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 325
+ + + A + + Q TY LI GN + +++KS+
Sbjct: 363 VRSDDIEKAYEMFHLMKRIGLVPDQH-TYGVLIHGLCIKGNMVEASKLYKSM 413
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 78/175 (44%), Gaps = 11/175 (6%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +L+ Y A ++F+ + + ++ NA+ YN ++ GQV K ++E +
Sbjct: 214 TYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERM 273
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
KR ++ P T+N+ + T +D+ +L+++ G V Y NI I+
Sbjct: 274 KRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKL-IGLCPTLVTY----NILISGFS 328
Query: 279 LVNAES--STLV-EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 330
V S S LV E E +TY L+ + D I++ ++ + K+
Sbjct: 329 KVGNSSVVSELVREMEDRGISPSKVTYTILMNTFV---RSDDIEKAYEMFHLMKR 380
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/228 (17%), Positives = 88/228 (38%), Gaps = 48/228 (21%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
YT +++ + + + EL++++K + N YN ++T Y G++ V +EI
Sbjct: 180 YTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEIS 239
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS------------------CDSGGSD 261
++ V + TYN+ I + + + L+ M C++G D
Sbjct: 240 KRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLD 299
Query: 262 DWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQI 321
+ Y+ + + LV TY+ LI ++ +GN + ++
Sbjct: 300 KALSYLEKLKLIGLCPTLV--------------------TYNILISGFSKVGNSSVVSEL 339
Query: 322 WKSLRMTKQKMTSRNYICILSSYL----------MLGHLKEVGEIIDQ 359
+ + + Y ++++++ M +K +G + DQ
Sbjct: 340 VREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQ 387
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 100/239 (41%), Gaps = 8/239 (3%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
YT L+ ++A+ +F R+ L+ N +Y M+ + G + + +++K
Sbjct: 145 YTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMK 204
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
V+P+++TYN I+ + K DE+S G + + V Y L+ +
Sbjct: 205 LVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEIS-KRGVACNAVTYNILIGGLCRKGQV 263
Query: 280 VNAES--STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
AE + A + T R T++ L+ G DK + L++ T Y
Sbjct: 264 SKAEGLLERMKRAHINPTTR---TFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTY 320
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE-FHML 395
++S + +G+ V E++ + + S ++ L+ F EKA E FH++
Sbjct: 321 NILISGFSKVGNSSVVSELVREMEDRGISPSKVTY-TILMNTFVRSDDIEKAYEMFHLM 378
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 97/240 (40%), Gaps = 35/240 (14%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+TAL+ ++ ++A+EL++ + QS++ N + YN ++ G++ + +
Sbjct: 248 TFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLM 307
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K P++ TYN IS +D+ K MSC+ G + D Y L++ Y
Sbjct: 308 ASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE-GFNADIFTYNTLIHGYCQVGK 366
Query: 279 L------------------------------VNAE-SSTLVEAEKSITQRQWITYDFLII 307
L VN E S LV+ + ++I I
Sbjct: 367 LRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNI 426
Query: 308 LYAGLGNKDKIDQIWK---SLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
+ GL DK+++ W+ L + K +R Y ++ G +E E+I + K+
Sbjct: 427 MIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEG 486
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 96/223 (43%), Gaps = 32/223 (14%)
Query: 73 TNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWM---VTHKEFVLSDSDYAT 129
T +I +V EGN + E R++ KE+ + + + + H L D+ Y
Sbjct: 783 TALIDTFVKEGN---LLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHG--CLGDAKYM- 836
Query: 130 RIDLM-------------TKVFGIHSGERYFEGLPLSAKTSE--------TYTALLHLYA 168
DLM T + G +R +G+ L + + TY L+H Y
Sbjct: 837 -FDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYC 895
Query: 169 GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIF 228
A A+++F R+ +S + + YN ++ + G++EK ++VE++++ + DI
Sbjct: 896 QAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDII 955
Query: 229 TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
TYN+ I T + + ++ G D + Y+ +++
Sbjct: 956 TYNIIIQGLCRTDKLKEAWCLFRSLT-RKGVKPDAIAYITMIS 997
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 91/210 (43%), Gaps = 10/210 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +L++ + A+ +F+ + + + YN ++T + +VE + E+
Sbjct: 816 TYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM 875
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ +V D FTYN I ++ +K + M D G S D V Y L++
Sbjct: 876 TYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMV-DCGVSPDIVTYNILLDCLCNNGK 934
Query: 279 LVNAESSTLVE-AEKSITQRQWITYDFLIILYAGLGNKDKIDQIW---KSLRMTKQKMTS 334
+ ++ +VE +KS ITY+ +I GL DK+ + W +SL K +
Sbjct: 935 I--EKALVMVEDLQKSEMDVDIITYNIII---QGLCRTDKLKEAWCLFRSLTRKGVKPDA 989
Query: 335 RNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
YI ++S G +E ++ + K+
Sbjct: 990 IAYITMISGLCRKGLQREADKLCRRMKEDG 1019
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 86/191 (45%), Gaps = 6/191 (3%)
Query: 83 GNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHS 142
G + ++ L +L + R++ A+ + + M FV + Y T I+ + K +++
Sbjct: 669 GFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG-FVPNVVIYNTVINGLCKNRDLNN 727
Query: 143 GERYFEGLPLSAKTSE--TYTALLH-LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMM 199
F + ++ TY L+ L +WT+ A L + VK+ + N + + ++
Sbjct: 728 ALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRK-IDPNVIFFTALI 786
Query: 200 TLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG 259
++ G + + + +E+ R++VVP++FTYN I+ + K D M G
Sbjct: 787 DTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV-SKGC 845
Query: 260 SDDWVKYVNLV 270
D V Y L+
Sbjct: 846 FPDVVTYNTLI 856
>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
Length = 1202
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 111/260 (42%), Gaps = 11/260 (4%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE---TYTALLHLYAGAKWTEKAEELFERV 183
Y ID + KV + E+ F+ + L+ + TY L+ Y EK+ ++ ER+
Sbjct: 590 YNVLIDGLCKVRQMKDAEQLFDEM-LARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERM 648
Query: 184 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 243
K N+ + + +N ++ G VE V+ E+K + VPD FT+++ ++
Sbjct: 649 KADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKA 708
Query: 244 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 303
D E + DSG + L+N + AE E K + + + Y+
Sbjct: 709 DAALGVY-ETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNE-VLYN 766
Query: 304 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN--YICILSSYLMLGHLKEVGEIIDQWK 361
+I Y+ G D + K M KQ M + Y C++ ++ LG ++ + +++ K
Sbjct: 767 TMIDGYSRKG--DLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMK 824
Query: 362 QSATSDFDISACNRLLGAFS 381
S + N L+G +
Sbjct: 825 LKGVSP-SVETYNILIGGYG 843
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 84/189 (44%), Gaps = 2/189 (1%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
+ + ETY L+ Y +K +L + ++ + N + Y ++ ++ + +
Sbjct: 829 SPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQI 888
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
V +++ + V P++ YN+ I C + I+ +F +EM G + V Y L++
Sbjct: 889 VKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMF-KKGIELNLVTYNTLIDGL 947
Query: 274 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
L AE L+E + + TY+ LI Y GN + +++ ++ + K T
Sbjct: 948 SMNGKLAEAE-DMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPT 1006
Query: 334 SRNYICILS 342
+ Y ++S
Sbjct: 1007 LKTYHLLIS 1015
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 82/187 (43%), Gaps = 8/187 (4%)
Query: 159 TYTALLH-LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
TY L+ L K E AE++ + + L + YN +++ Y G V++ + EE
Sbjct: 939 TYNTLIDGLSMNGKLAE-AEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEE 997
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
+K + P + TY+L IS C I+ KK EMS D + Y +++ Y
Sbjct: 998 MKTSGIKPTLKTYHLLISLCTKE-GIELTKKIFGEMSLQP----DLLVYNGVLHCYAVHG 1052
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
+ A + EKSI + TY+ LI+ +G ++ + ++ + + + Y
Sbjct: 1053 DMDKAFNLQKQMIEKSIGLDK-TTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTY 1111
Query: 338 ICILSSY 344
I+ +
Sbjct: 1112 DIIVKGH 1118
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 95/225 (42%), Gaps = 9/225 (4%)
Query: 183 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 242
+++ + + L YN ++ + +G +E V ++K K V P + TYN+ I
Sbjct: 788 MEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYE 847
Query: 243 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 302
D+ L EM D+G + V Y L+N S L+ A+ ++ ++ I Y
Sbjct: 848 FDKCFDLLKEME-DNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRI-Y 905
Query: 303 DFLIILYAGLGNKDKIDQIWK-SLRMTKQ--KMTSRNYICILSSYLMLGHLKEVGEIIDQ 359
+ LI G +K KI+ ++ S M K+ ++ Y ++ M G L E +++ +
Sbjct: 906 NMLI---DGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLE 962
Query: 360 WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 404
+ D+ N L+ + G ++ + + PT
Sbjct: 963 ISRKGLKP-DVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPT 1006
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 81/186 (43%), Gaps = 8/186 (4%)
Query: 175 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 234
K ELF R+K +S +YN ++ V Q++ + +E+ + ++P + TYN I
Sbjct: 570 KGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLI 629
Query: 235 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 294
N ++ K + M D+ + + L+ A + +AE + L E +
Sbjct: 630 DGYCKDGNPEKSFKVRERMKADN-IEPSLITFNTLLKGLFKAGMVEDAE-NVLTEMKDQG 687
Query: 295 TQRQWITYDFLIILYAGLGNKDKIDQ---IWKSLRMTKQKMTSRNYICILSSYLMLGHLK 351
T+ IL+ G + DK D ++++ + KM + +L++ G ++
Sbjct: 688 FVPDAFTFS---ILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIE 744
Query: 352 EVGEII 357
+ EI+
Sbjct: 745 KAEEIL 750
>gi|302826107|ref|XP_002994593.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
gi|300137364|gb|EFJ04344.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
Length = 521
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/316 (19%), Positives = 121/316 (38%), Gaps = 40/316 (12%)
Query: 109 EISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGL--PLSAKTSETYTALLHL 166
++ EW++ F Y ID K I E+ F + L ET+ L++
Sbjct: 89 QMCEWVLQGTTFRPDLGCYNLLIDAYGKSLNIEDAEKTFNRMQEALCVPNEETFGVLING 148
Query: 167 YAGAKWTEKAEELFERVKQSNLSFNALM-------------------------------- 194
Y A EKAEELF ++++ S L
Sbjct: 149 YRLAGSFEKAEELFVQMQKRGYSPGPLACNTFLHVLEDAKEYRRAEALFRDLEKYECEPN 208
Query: 195 ---YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 251
YN M+ +Y G+ K ++ ++R P+I T+ +++ A + +++ D
Sbjct: 209 IDTYNRMIVIYGKAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFD 268
Query: 252 EMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAG 311
++ + D Y L+ Y A +++ ++++ LI Y
Sbjct: 269 KLQ-EFDYKPDHYAYNALMEAYSQGGSPAGA-LEIFQTMQRNGCFPDTVSHNILINAYGR 326
Query: 312 LGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDIS 371
G + ++I+KS++ ++ + +LS+Y G ++E E++ ++ T D
Sbjct: 327 AGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKP-DTL 385
Query: 372 ACNRLLGAFSDVGLTE 387
N L+ A+ G E
Sbjct: 386 IYNSLINAYGVSGRHE 401
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 102/247 (41%), Gaps = 8/247 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+TAL++ +A +AE F+++++ + + YN +M Y G + + +
Sbjct: 246 TFTALMNAFARQGLYREAERYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTM 305
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+R PD ++N+ I++ + +K M +G S + + L++ Y A
Sbjct: 306 QRNGCFPDTVSHNILINAYGRAGLYEDAEKIFKSMQ-SAGFSPNLKSNMLLLSAYARAGR 364
Query: 279 LVNAESSTLVEA-EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN- 336
+ AE LV A E+ T+ + Y+ LI Y G + ++ + + + K T +
Sbjct: 365 VEEAEE--LVSAMERDGTKPDTLIYNSLINAYGVSGRHEDMEALLAKMVKSSSKQTKPDI 422
Query: 337 --YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 394
Y ++ Y G + E+ + D + L+G ++ L K
Sbjct: 423 GTYNTLIQVYAQAGFIPRAEELFQGLARLKLVP-DATTWTALMGGYAKKKLYRKCTSILK 481
Query: 395 LLLQKNC 401
+L+ C
Sbjct: 482 KMLESGC 488
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 48/255 (18%), Positives = 109/255 (42%), Gaps = 18/255 (7%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
+TY ++ +Y A KAE L+ ++++ N + +M + G + ++
Sbjct: 210 DTYNRMIVIYGKAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDK 269
Query: 218 IKRKNVVPDIFTYNLWI------SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
++ + PD + YN + S A L I Q + +G D V + L+N
Sbjct: 270 LQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTMQ-------RNGCFPDTVSHNILIN 322
Query: 272 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLII-LYAGLGNKDKIDQIWKSLRMTKQ 330
Y A +AE + ++ +S + + L++ YA G ++ +++ ++
Sbjct: 323 AYGRAGLYEDAEK--IFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGT 380
Query: 331 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT--SDFDISACNRLLGAFSDVGLTEK 388
K + Y ++++Y + G +++ ++ + +S++ + DI N L+ ++ G +
Sbjct: 381 KPDTLIYNSLINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPR 440
Query: 389 ANEFHMLLLQKNCAP 403
A E L + P
Sbjct: 441 AEELFQGLARLKLVP 455
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 46/95 (48%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+ +YA A + +AEELF+ + + L +A + +M Y K +++++
Sbjct: 424 TYNTLIQVYAQAGFIPRAEELFQGLARLKLVPDATTWTALMGGYAKKKLYRKCTSILKKM 483
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
D T + S+C + ++QV + ++ +
Sbjct: 484 LESGCRADAVTARVLFSACRSPEQVEQVTQLMESL 518
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 78/217 (35%), Gaps = 36/217 (16%)
Query: 225 PDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES 284
PD+ YNL I + +LNI+ +K + M ++ + + L+N Y A AE
Sbjct: 102 PDLGCYNLLIDAYGKSLNIEDAEKTFNRMQ-EALCVPNEETFGVLINGYRLAGSFEKAEE 160
Query: 285 ----------------------------------STLVEAEKSITQRQWITYDFLIILYA 310
+ + EK + TY+ +I++Y
Sbjct: 161 LFVQMQKRGYSPGPLACNTFLHVLEDAKEYRRAEALFRDLEKYECEPNIDTYNRMIVIYG 220
Query: 311 GLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDI 370
G K + +++S+R + +++++ G +E D+ Q D
Sbjct: 221 KAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDKL-QEFDYKPDH 279
Query: 371 SACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
A N L+ A+S G A E + + C P S
Sbjct: 280 YAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVS 316
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 138/331 (41%), Gaps = 22/331 (6%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSD---YA 128
A + IQ VSEG + ++ L K KHA+E+ + M+ D D Y
Sbjct: 292 ALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGG----LDPDIYTYN 347
Query: 129 TRIDLMTKVFGIHSGERYFEGLPLSAKTSE---TYTALLHLYAGAKWTEKAEELFERVKQ 185
+ I + K+ I + + + +S S TY A++ ++A E+ +
Sbjct: 348 SLISGLCKLGEIEEAVKILDQM-VSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTS 406
Query: 186 SNLSFNALMYNEMMTLYMSVGQVEKVAL-VVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
+ + +N ++ + + K A+ + EE+K K PD FTYN+ I S ++ ++
Sbjct: 407 KGILPDVCTFNSLIQ-GLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLE 465
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 304
+ L EM + G + + V Y L++ + + AE E E R +TY+
Sbjct: 466 EALNLLKEMELN-GCARNVVIYNTLIDGFCKNKRIEEAE-EIFDEMELQGVSRDSVTYNT 523
Query: 305 LIILYAGLGNKDKID---QIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 361
LI GL +++ Q+ + M + Y +L+ + G +K+ +I+ Q
Sbjct: 524 LI---DGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIV-QTM 579
Query: 362 QSATSDFDISACNRLLGAFSDVGLTEKANEF 392
S+ + DI L+ G + A+
Sbjct: 580 TSSGCNPDIVTYATLISGLCKAGRVQVASRL 610
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/320 (18%), Positives = 127/320 (39%), Gaps = 16/320 (5%)
Query: 92 RHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLP 151
+ +++ LR+ AL + W FV S S Y + + K R E +
Sbjct: 65 KQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMK 124
Query: 152 LSAKTSETYTALLHLYAGAKWTEKAEELFERVK----QSNLSFNALMYNEMMTLYMSVGQ 207
LS + L+ + + K+ E +E+ VK + + + YN ++ + + +
Sbjct: 125 LSGCEFDRGIFLIFVESYGKF-ELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANK 183
Query: 208 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 267
++ V + R+ + D+ T+N+ I + + ++EM G S D +
Sbjct: 184 LKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMP-SYGLSPDETTFT 242
Query: 268 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI-ILYAGLGNKDKIDQIWKSLR 326
++ YI +L A + ++ + + D + +L G + +IDQ ++
Sbjct: 243 TIMQGYIEGGNLDGA-----LRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQ 297
Query: 327 MTKQ---KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDV 383
+ Y +++ +GH K E++D D DI N L+ +
Sbjct: 298 EAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGL-DPDIYTYNSLISGLCKL 356
Query: 384 GLTEKANEFHMLLLQKNCAP 403
G E+A + ++ ++C+P
Sbjct: 357 GEIEEAVKILDQMVSRDCSP 376
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 99/245 (40%), Gaps = 3/245 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +L+ E+A ++ +++ + S NA+ YN +++ +V++ + +
Sbjct: 345 TYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLL 404
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K ++PD+ T+N I + N +EM G D Y L++ ++
Sbjct: 405 TSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMK-GKGCRPDEFTYNMLIDSLCSSRK 463
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L A + L E E + R + Y+ LI + ++ ++I+ + + S Y
Sbjct: 464 LEEA-LNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYN 522
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
++ +++ +++DQ D N LL F G +KA + +
Sbjct: 523 TLIDGLCKSKRVEDAAQLMDQMIMEGLRP-DKFTYNSLLTHFCKTGDIKKAADIVQTMTS 581
Query: 399 KNCAP 403
C P
Sbjct: 582 SGCNP 586
>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like, partial [Brachypodium distachyon]
Length = 907
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/234 (19%), Positives = 100/234 (42%), Gaps = 6/234 (2%)
Query: 176 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
A + + +++ L N + Y+ +M Y +GQ E ++ ++ K + P++ TY L +
Sbjct: 183 AADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVK 242
Query: 236 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAE--SSTLVEAEKS 293
+++ +K + E+ + D V Y L+N Y + +A +++A
Sbjct: 243 GYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAG-- 300
Query: 294 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 353
Q Y+ +I Y LG +++++ ++ + +Y ++ Y G + +
Sbjct: 301 -VQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKA 359
Query: 354 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
E D ++ + ++ N LL F G + A + L+L++ P S
Sbjct: 360 FETCDMMVRNGFTGTTLTY-NTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEIS 412
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 84/185 (45%), Gaps = 2/185 (1%)
Query: 175 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 234
K + E + N +M+N ++ +G+V + E++K K +PD FTY+ I
Sbjct: 629 KVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLI 688
Query: 235 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 294
C+A+ +ID DEM + + + V Y +L+ + ++ A S K I
Sbjct: 689 HGCSASGSIDLAFGLRDEM-LSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGI 747
Query: 295 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 354
+ ITY+ LI + GN + ++ + + + T Y ++ G+++E
Sbjct: 748 SPNA-ITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAI 806
Query: 355 EIIDQ 359
+++DQ
Sbjct: 807 KLLDQ 811
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/131 (20%), Positives = 64/131 (48%), Gaps = 4/131 (3%)
Query: 152 LSAKTSE---TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 208
LSA+ + TY +L++ + +A LF +++ +S NA+ YN ++ + G
Sbjct: 708 LSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNT 767
Query: 209 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268
+ + +++ ++ + P +FTY + I +++ K LD+M ++ +++ Y
Sbjct: 768 TEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQM-IENNVDPNFITYWT 826
Query: 269 LVNIYITASHL 279
L+ Y ++
Sbjct: 827 LIQGYARCGNM 837
Score = 38.1 bits (87), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 82/200 (41%), Gaps = 13/200 (6%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY++L+H + + + A L + + + L+ N + YN ++ V + + ++
Sbjct: 683 TYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKL 742
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ K + P+ TYN I N + K +M G Y L++ T +
Sbjct: 743 QSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKM-IKEGIQPTVFTYTILIHGLCTQGY 801
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ A L + ++ +ITY LI YA GN I +++ + +I
Sbjct: 802 MEEA-IKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYNEM-----------HI 849
Query: 339 CILSSYLMLGHLKEVGEIID 358
C L GH+K+ +++
Sbjct: 850 CGLLPANWTGHVKQAEPVVN 869
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 178 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 237
++F+R++ SN M+N MM Y+ EK L+ + + + NV PD +TY L + +C
Sbjct: 96 QIFDRIENSN----GFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQAC 151
Query: 238 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 297
A L K+ D + SD +V+ L+N+Y ++ +A L + +
Sbjct: 152 AVRLLEFGGKEIHDHVLKVGFDSDVYVQN-TLINMYAVCGNMRDARK--LFDESPVLDSV 208
Query: 298 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 357
W + + AG K +++ ++ +M RN + S ++LG ++G+++
Sbjct: 209 SWNS------ILAGYVKKGDVEEA----KLIFDQMPQRNIVASNSMIVLLG---KMGQVM 255
Query: 358 DQWKQ-SATSDFDISACNRLLGAFSDVGLTEKA 389
+ WK + + D+ + + L+ + G+ E+A
Sbjct: 256 EAWKLFNEMDEKDMVSWSALISGYEQNGMYEEA 288
>gi|357476703|ref|XP_003608637.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509692|gb|AES90834.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 715
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 70/131 (53%), Gaps = 3/131 (2%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVK 184
Y T ++ M K FE + S A +T TA++ +Y A+W++ A EL++R+K
Sbjct: 333 YNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTAVIKIYGKARWSKDALELWKRMK 392
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR-KNVVPDIFTYNLWISSCAATLNI 243
++ + ++YN ++ + VG +E+ + ++K+ ++ PD ++Y ++ + +
Sbjct: 393 ENGWPMDFILYNTLLNMCADVGLIEEAETLFRDMKQSEHCKPDSWSYTAMLNIYGSEGAV 452
Query: 244 DQVKKFLDEMS 254
D+ K +EMS
Sbjct: 453 DKAMKLFEEMS 463
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/224 (19%), Positives = 103/224 (45%), Gaps = 12/224 (5%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T++A+L +YA E+ LFER + + + + ++ + ++ G + + V++E+
Sbjct: 262 TFSAILDVYARLGKVEEVVNLFERGRATGWKPDPITFSVLGKMFGEAGDYDGIRYVLQEM 321
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K V P++ YN + + + +EM DSG + + ++ IY A
Sbjct: 322 KSLGVQPNLVVYNTLLEAMGKAGKPGFARSLFEEM-IDSGIAPNEKTLTAVIKIYGKARW 380
Query: 279 LVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ-KMT 333
S +E K + + W I Y+ L+ + A +G ++ + +++ ++ ++ K
Sbjct: 381 -----SKDALELWKRMKENGWPMDFILYNTLLNMCADVGLIEEAETLFRDMKQSEHCKPD 435
Query: 334 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLL 377
S +Y +L+ Y G + + ++ ++ + + ++ C L+
Sbjct: 436 SWSYTAMLNIYGSEGAVDKAMKLFEEMSKFGI-ELNVMGCTCLI 478
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 19/198 (9%)
Query: 75 VIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLM 134
V+Q S G Q + +L+ + K+ + A + E M+ DS A +
Sbjct: 317 VLQEMKSLGVQPNLVVYNTLLEAMGKAGKPGFARSLFEEMI--------DSGIAPNEKTL 368
Query: 135 TKVFGIHSGERYF-EGLPLSAKTSET--------YTALLHLYAGAKWTEKAEELFERVKQ 185
T V I+ R+ + L L + E Y LL++ A E+AE LF +KQ
Sbjct: 369 TAVIKIYGKARWSKDALELWKRMKENGWPMDFILYNTLLNMCADVGLIEEAETLFRDMKQ 428
Query: 186 S-NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
S + ++ Y M+ +Y S G V+K + EE+ + + ++ I + ID
Sbjct: 429 SEHCKPDSWSYTAMLNIYGSEGAVDKAMKLFEEMSKFGIELNVMGCTCLIQCLGKAMEID 488
Query: 245 QVKKFLDEMSCDSGGSDD 262
+ K D +S + G D
Sbjct: 489 DLVKVFD-ISVERGVKPD 505
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 128/299 (42%), Gaps = 28/299 (9%)
Query: 44 CLDEETSNSDGKDDLKSRIFRIS-LPKRSATNVIQRWVSEGNQATVS-ELRHILKELRKS 101
C D+ TS D D + R+ + +P + N++ + + + N++ + EL H++ + R
Sbjct: 133 CADKRTS--DAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGG 190
Query: 102 QRYKHALEISEWMVTHKEFVLSDSD--YATRIDLMTKVFGIHSGERYFEGLPLSAKTSET 159
+S V + F DSD Y+T +++ + GI LP T
Sbjct: 191 GSPPDV--VSYTTVINGFFKEGDSDKAYSTYHEMLDR--GI---------LP----DVVT 233
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y +++ A+ +KA E+ + ++ + + + YN ++ Y S GQ ++ +++++
Sbjct: 234 YNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMR 293
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
V PD+ TY+L + + +K D M+ G + Y L+ Y T L
Sbjct: 294 SDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMT-KRGLKPEITTYGTLLQGYATKGAL 352
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
V + I ++ + LI YA N+ K+DQ +Q+ + N +
Sbjct: 353 VEMHGLLDLMVRNGIHPDHYV-FSILICAYA---NQGKVDQAMLVFSKMRQQGLNPNAV 407
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 80/186 (43%), Gaps = 12/186 (6%)
Query: 127 YATRIDLMTKVFGIHSGERYFE-----GLPLSAKTSETYTALLH-LYAGAKWTEKAEELF 180
Y I ++ K + YFE GL + + Y +L+H L KW E+AEEL
Sbjct: 409 YGAVIGILCKSGRVEDAMLYFEQMIDEGL---SPGNIVYNSLIHGLCTCNKW-ERAEELI 464
Query: 181 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 240
+ + N + +N ++ + G+V + + E + R V P++ TYN I+
Sbjct: 465 LEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLA 524
Query: 241 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI 300
+D+ K L M G + V Y L+N Y S + +A E E S I
Sbjct: 525 GKMDEAMKLLSGM-VSVGLKPNTVTYSTLINGYCKISRMEDA-LVLFKEMESSGVSPDII 582
Query: 301 TYDFLI 306
TY+ ++
Sbjct: 583 TYNIIL 588
>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g15630, mitochondrial; Flags: Precursor
gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 69/138 (50%), Gaps = 5/138 (3%)
Query: 136 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 195
K F +H E +G+ T TYT+L+++ T +A+ELFE+V + + +M
Sbjct: 415 KAFALHD-EMMTDGI---QPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMM 470
Query: 196 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 255
N +M + ++G +++ +++E+ ++ PD TYN + ++ ++ + EM
Sbjct: 471 NTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMK- 529
Query: 256 DSGGSDDWVKYVNLVNIY 273
G D + Y L++ Y
Sbjct: 530 RRGIKPDHISYNTLISGY 547
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 89/214 (41%), Gaps = 14/214 (6%)
Query: 181 ERVKQSNL----SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 236
E VKQ + ++N L++ L+M ++E +++ EI+ K +V D TYN+ I+
Sbjct: 352 EMVKQGMVPTFYTYNTLIHG----LFME-NKIEAAEILIREIREKGIVLDSVTYNILING 406
Query: 237 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 296
+ + DEM D G Y +L IY+ E+ L E
Sbjct: 407 YCQHGDAKKAFALHDEMMTD-GIQPTQFTYTSL--IYVLCRKNKTREADELFEKVVGKGM 463
Query: 297 RQ-WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 355
+ + + L+ + +GN D+ + K + M Y C++ G +E E
Sbjct: 464 KPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARE 523
Query: 356 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
++ + K+ IS N L+ +S G T+ A
Sbjct: 524 LMGEMKRRGIKPDHISY-NTLISGYSKKGDTKHA 556
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 5/159 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+ ++ E A + +K + YN +++ + G+ +V + E+
Sbjct: 262 TYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEV---LREM 318
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K +VPD +YN+ I C+ +++ + DEM G + Y L++ +
Sbjct: 319 KEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEM-VKQGMVPTFYTYNTLIHGLFMENK 377
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 317
+ AE EK I +TY+ LI Y G+ K
Sbjct: 378 IEAAEILIREIREKGIVL-DSVTYNILINGYCQHGDAKK 415
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 107/270 (39%), Gaps = 25/270 (9%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
A +V ++ G V ++ L K+ + + A + E MV K Y+ +
Sbjct: 200 ACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV-DKGVTPDVITYSVLV 258
Query: 132 DLMTKVFGIHSGERYFEGLPLSAKTSE-------TYTALLHLYAGAKWTEKAEELFERVK 184
D K + G+ T T+ L+ A E+A LFE +
Sbjct: 259 DAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMV 318
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
NL + + + ++ GQVE +++ + V P++ TYN + + I+
Sbjct: 319 AKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIE 378
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT-QRQWITYD 303
+ +FL+EM SG D + Y +LV AS +A LV KS +TY+
Sbjct: 379 EACQFLEEMV-SSGCVPDSITYGSLVYALCRASRTDDALQ--LVSELKSFGWDPDTVTYN 435
Query: 304 FLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
L +D +WKS + T+Q +T
Sbjct: 436 IL------------VDGLWKSGK-TEQAIT 452
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/251 (17%), Positives = 101/251 (40%), Gaps = 8/251 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNL--SFNALMYNEMMTLYMSVGQVEKVALVVE 216
TY + L T +A EL ++ +L S + + ++ ++ GQ+++ V +
Sbjct: 146 TYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFD 205
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
++ VP++ TYN ++ +++ ++ M D G + D + Y LV+ + A
Sbjct: 206 DMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV-DKGVTPDVITYSVLVDAFCKA 264
Query: 277 SHLVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 332
S + A A + T +T++ LI GN ++ +++ + +
Sbjct: 265 SRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQP 324
Query: 333 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
+ ++ G ++ +I+D ++ N L+ G E+A +F
Sbjct: 325 DVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPP-NVVTYNALVHGLCKSGRIEEACQF 383
Query: 393 HMLLLQKNCAP 403
++ C P
Sbjct: 384 LEEMVSSGCVP 394
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 6/120 (5%)
Query: 140 IHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMM 199
I GE +G+ A T TY +++ + ELFE + + + + YN ++
Sbjct: 23 IFRGEMARDGV---APTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLI 79
Query: 200 TLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM---SCD 256
G +E+ + ++ + VP++ TY++ I+ ID+ ++ + EM SCD
Sbjct: 80 DSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCD 139
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 99/232 (42%), Gaps = 3/232 (1%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y+A++ A+ LF +++ + + YN M+ + S G+ +++E+
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
+ + PD+ TYN I++ + ++ DEM G + + Y ++++ + + L
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEM-LPRGIIPNTITYSSMIDGFCKQNRL 376
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 339
AE + A K + IT++ LI Y G D ++ + T + Y
Sbjct: 377 DAAEHMFYLMATKGCSP-NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435
Query: 340 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 391
++ + ++G L +++ + S DI C+ LL D G + A E
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCP-DIVTCDTLLDGLCDNGKLKDALE 486
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 79/187 (42%), Gaps = 7/187 (3%)
Query: 45 LDEETSNSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRY 104
LD N KD L+ +F++ ++S ++ G + V ++ L ++
Sbjct: 472 LDGLCDNGKLKDALE--MFKVM--QKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKF 527
Query: 105 KHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTA 162
A E+ E M H+ V Y++ ID + K + + F+ + + + T+T
Sbjct: 528 LEAEELYEEM-PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTT 586
Query: 163 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 222
L++ Y A + ELF + + + NA+ Y ++ + VG + + +E+
Sbjct: 587 LINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSG 646
Query: 223 VVPDIFT 229
V PD T
Sbjct: 647 VYPDTIT 653
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 78/177 (44%), Gaps = 8/177 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY AL++ + +AEEL++ + + N + Y+ M+ + +++ + +
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K P++ T+N I ID + L EM+ ++G D Y L++ +
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT-ETGLVADTTTYNTLIHGFYLVGD 445
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID---QIWKSLRMTKQKM 332
L NA L E S +T D L+ GL + K+ +++K ++ +K+ +
Sbjct: 446 L-NAALDLLQEMISSGLCPDIVTCDTLL---DGLCDNGKLKDALEMFKVMQKSKKDL 498
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 2/131 (1%)
Query: 195 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 254
YN +++ ++ G+ + + EE+ + +VPD TY+ I +D+ + D M
Sbjct: 514 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573
Query: 255 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 314
S S + V + L+N Y A V+ E + ITY LI + +GN
Sbjct: 574 SKS-FSPNVVTFTTLINGYCKAGR-VDDGLELFCEMGRRGIVANAITYITLICGFRKVGN 631
Query: 315 KDKIDQIWKSL 325
+ I++ +
Sbjct: 632 INGALDIFQEM 642
>gi|302795973|ref|XP_002979749.1| hypothetical protein SELMODRAFT_111428 [Selaginella moellendorffii]
gi|300152509|gb|EFJ19151.1| hypothetical protein SELMODRAFT_111428 [Selaginella moellendorffii]
Length = 388
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 106/252 (42%), Gaps = 10/252 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL--MYNEMMTLYMSVGQVEKVALVVE 216
TY L+ ++ + + A EL E++ S + + YN ++ + V V K ++E
Sbjct: 48 TYNTLIDVFHKLERFDSARELLEQMWDSGIRPGVMAETYNNVIASFCEVCNVRKAKGILE 107
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
+ PD+ TYN IS D + + EM + + + Y ++N +
Sbjct: 108 LMIDSGCKPDVVTYNTLISGLCKLRRADDALQLMREME----PAPNTITYNTVINGLWRS 163
Query: 277 SHLVNAESSTLVEAEKSITQRQWI-TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
+ E+ L++ S+ + TY+ +I +K ++ +R K +
Sbjct: 164 RK--DTEAQALLDEMISVGCPFSVSTYNCVIANLCRSREMEKAVDVFLYMRKKKCEADEV 221
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 395
+ ++ +L L++ G +D W A D+ + +LL A D G +KA E L
Sbjct: 222 TFATLVDGFLRDKRLEDAGGTLD-WMARAGIPSDVKSYTKLLNALCDRGSAQKACEIFNL 280
Query: 396 LLQKNCAPTNAS 407
++ + APT S
Sbjct: 281 MVDRGYAPTLVS 292
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/179 (20%), Positives = 76/179 (42%), Gaps = 9/179 (5%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
A ++ +S G +VS ++ L +S+ + A+++ +M K+ + +AT +
Sbjct: 169 AQALLDEMISVGCPFSVSTYNCVIANLCRSREMEKAVDVFLYM-RKKKCEADEVTFATLV 227
Query: 132 DLMTKVFGIHSGERYFE-----GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQS 186
D + + + G+P K+ YT LL+ +KA E+F +
Sbjct: 228 DGFLRDKRLEDAGGTLDWMARAGIPSDVKS---YTKLLNALCDRGSAQKACEIFNLMVDR 284
Query: 187 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 245
+ + YN ++ +VE ++ E++ + + PD+ +Y I A ID+
Sbjct: 285 GYAPTLVSYNVLLKGLCKALRVEHALVLFREMQEREIQPDVVSYTTVIKGLCAARRIDE 343
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 94/210 (44%), Gaps = 6/210 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+ + +K F ++++ N + YN ++ Y +G++++ +++ +
Sbjct: 12 TYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSM 71
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K + P++ +YN+ I+ ++ + + L+EM G + D V Y L+N Y
Sbjct: 72 SSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGY-KGFTPDEVTYNTLLNGYCKEG- 129
Query: 279 LVNAESSTLVEAE--KSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 336
N + ++ AE ++ +TY LI N ++ + + +R+ + R
Sbjct: 130 --NFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERT 187
Query: 337 YICILSSYLMLGHLKEVGEIIDQWKQSATS 366
Y ++ + G L E I+++ +S S
Sbjct: 188 YTTLIDGFSRQGLLNEAYRILNEMTESGFS 217
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 76/166 (45%), Gaps = 8/166 (4%)
Query: 112 EWMVTHKEFV---LSDS--DYATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALL 164
+ +V H E V +S S Y I+ M K ++ +F+ + + TYT L+
Sbjct: 133 QALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLI 192
Query: 165 HLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVV 224
++ +A + + +S S + + YN + + + ++E+ VV+E+ K +
Sbjct: 193 DGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLA 252
Query: 225 PDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 270
PD+ +Y+ IS +D+ + EM + G S D V Y +L+
Sbjct: 253 PDVVSYSTIISGFCRKGELDRAFQMKQEM-VEKGVSPDAVTYSSLI 297
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 64/148 (43%), Gaps = 2/148 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y +++ ++A E+ E + + + + YN ++ Y G + ++ E+
Sbjct: 82 SYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEM 141
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
R V P + TY I+S N+++ +F D+M G + Y L++ + +
Sbjct: 142 VRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRI-RGLRPNERTYTTLIDGF-SRQG 199
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLI 306
L+N L E +S +TY+ I
Sbjct: 200 LLNEAYRILNEMTESGFSPSVVTYNAFI 227
>gi|125577145|gb|EAZ18367.1| hypothetical protein OsJ_33897 [Oryza sativa Japonica Group]
Length = 730
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 128/295 (43%), Gaps = 36/295 (12%)
Query: 115 VTHKEFVLSD--SDYATRIDL----MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYA 168
V EF L+ S TR+DL + F G LP+ T ++LY
Sbjct: 237 VMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCE--TNLPVKNST-------MYLYL 287
Query: 169 GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL-----------VVEE 217
T++A LFE+++ +++ + +N M++ Y + K L + +
Sbjct: 288 RKGETDEAMRLFEQMEDASI----ITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRD 343
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
+KR + PD+FT++ +S C+A + ++Q ++ + + SG D V LVN+Y
Sbjct: 344 LKRSVMKPDLFTFSSILSVCSAMMALEQGEQ-IHAQTIKSGFLSDVVVNSALVNMYNKCG 402
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
+ +A + L + R ++T+ +I Y+ G + Q+++ +R+ + +
Sbjct: 403 CIQDANKAFL-----EMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITF 457
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
+ +LS+ G ++E D K+ + + ++ F +G E A F
Sbjct: 458 VSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSF 512
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 110/268 (41%), Gaps = 6/268 (2%)
Query: 127 YATRIDLMTKVFGIHSGE---RYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERV 183
Y T +D M K+ S R E + Y+A++ A+ LF +
Sbjct: 222 YGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM 281
Query: 184 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 243
++ + + YN M+ + S G+ +++E+ + + PD+ TYN I++
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341
Query: 244 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 303
+ ++ DEM G + + Y ++++ + + L AE + A K + IT++
Sbjct: 342 FEAEELYDEM-LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP-NLITFN 399
Query: 304 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 363
LI Y G D ++ + T + Y ++ + ++G L +++ + S
Sbjct: 400 TLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISS 459
Query: 364 ATSDFDISACNRLLGAFSDVGLTEKANE 391
DI C+ LL D G + A E
Sbjct: 460 GLCP-DIVTCDTLLDGLCDNGKLKDALE 486
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 79/187 (42%), Gaps = 7/187 (3%)
Query: 45 LDEETSNSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRY 104
LD N KD L+ +F++ ++S ++ G + V ++ L ++
Sbjct: 472 LDGLCDNGKLKDALE--MFKVM--QKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKF 527
Query: 105 KHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTA 162
A E+ E M H+ V Y++ ID + K + + F+ + + + T+T
Sbjct: 528 LEAEELYEEM-PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTT 586
Query: 163 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 222
L++ Y A + ELF + + + NA+ Y ++ + VG + + +E+
Sbjct: 587 LINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSG 646
Query: 223 VVPDIFT 229
V PD T
Sbjct: 647 VYPDTIT 653
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 2/131 (1%)
Query: 195 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 254
YN +++ ++ G+ + + EE+ + +VPD TY+ I +D+ + D M
Sbjct: 514 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573
Query: 255 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 314
S S + V + L+N Y A V+ E + ITY LI + +GN
Sbjct: 574 SKS-FSPNVVTFTTLINGYCKAGR-VDDGLELFCEMGRRGIVANAITYITLICGFRKVGN 631
Query: 315 KDKIDQIWKSL 325
+ I++ +
Sbjct: 632 INGALDIFQEM 642
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 78/177 (44%), Gaps = 8/177 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY AL++ + +AEEL++ + + N + Y+ M+ + +++ + +
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K P++ T+N I ID + L EM+ ++G D Y L++ +
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT-ETGLVADTTTYNTLIHGFYLVGD 445
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID---QIWKSLRMTKQKM 332
L NA L E S +T D L+ GL + K+ +++K ++ +K+ +
Sbjct: 446 L-NAALDLLQEMISSGLCPDIVTCDTLL---DGLCDNGKLKDALEMFKVMQKSKKDL 498
>gi|242082131|ref|XP_002445834.1| hypothetical protein SORBIDRAFT_07g026590 [Sorghum bicolor]
gi|241942184|gb|EES15329.1| hypothetical protein SORBIDRAFT_07g026590 [Sorghum bicolor]
Length = 426
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 73/147 (49%), Gaps = 6/147 (4%)
Query: 149 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 208
GLPLS T++A++ Y ++ ++A E+F R+ + +YN ++ + G
Sbjct: 141 GLPLS---PTTFSAVISSYGHSRLPDQAVEVFNRLPRFGCPQTTEVYNALLDALCANGNF 197
Query: 209 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268
++ + RK V PD T++ + S A +++ + FLD+M+ S G V+ +
Sbjct: 198 TGAYKLLRRMARKGVAPDRATFSTLVDSWCAAGKLNEAQAFLDDMA--SRGFRPPVRGRD 255
Query: 269 -LVNIYITASHLVNAESSTLVEAEKSI 294
LV+ + A HL A++ L ++ I
Sbjct: 256 LLVDGLVRAGHLEEAKAFALRMTKEGI 282
>gi|242059435|ref|XP_002458863.1| hypothetical protein SORBIDRAFT_03g041710 [Sorghum bicolor]
gi|241930838|gb|EES03983.1| hypothetical protein SORBIDRAFT_03g041710 [Sorghum bicolor]
Length = 544
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 64/156 (41%), Gaps = 35/156 (22%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQS 186
+AT I K + R+FE P +T T+T L+H Y A E A E+F+R+
Sbjct: 156 WATLIRGFAKKGDMAEARRWFETTPPGMRTVVTWTVLVHGYVSAGDMEAAREVFDRMP-- 213
Query: 187 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVV---------------------- 224
+ NA +++ M+T Y G E+ V I +N+V
Sbjct: 214 --ARNAFVWSSMVTGYFKAGNAEEAQAVFHRIPTRNLVNWNALIAGYAQIGCSEKALEAF 271
Query: 225 ---------PDIFTYNLWISSCAATLNIDQVKKFLD 251
PD FT +S+CA +++Q KK D
Sbjct: 272 DSMLQERVKPDEFTMASLLSACAQLGSLEQGKKVHD 307
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 124/336 (36%), Gaps = 32/336 (9%)
Query: 82 EGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSD--------------SDY 127
G T HILK L + H I E + T K D D
Sbjct: 37 PGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCKCPEDVALTVIKAYAKNSMPDQ 96
Query: 128 ATRI-DLMTKVFGIHSGERYFEGLPLSAKTSETYTALLH-LYAGAKWTEKAEELFERVKQ 185
A I M ++FG G R +Y +LL+ L KW E AE F +
Sbjct: 97 ALDIFQRMHEIFGCQPGIR-------------SYNSLLNALIESNKWDE-AESFFLYFET 142
Query: 186 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 245
LS N YN ++ + Q +K ++ + + PD+F+Y I+S A +
Sbjct: 143 MGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSD 202
Query: 246 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFL 305
K DEM + G + D Y L++ + ++NA + +Y+ +
Sbjct: 203 ALKLFDEMP-ERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVM 261
Query: 306 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 365
I G D+ +IW ++ ++ Y ++ G+L + + ++
Sbjct: 262 INGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGV 321
Query: 366 SDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 401
S D+ N +L + G E+ E ++ ++ C
Sbjct: 322 SP-DVVVYNTMLNGYLRAGRIEECLELWKVMEKEGC 356
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 135/346 (39%), Gaps = 49/346 (14%)
Query: 100 KSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSET 159
+ +++ A E+ WM + F Y T I+ + K + + F+ +P T +
Sbjct: 161 RKKQFDKAKELLNWM-WEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDV 219
Query: 160 --YTALLHLYAGAKWTEKAEELFERV-KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
Y L+ + A E++ER+ K ++ N YN M+ G+ ++ +
Sbjct: 220 ACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWH 279
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
+K+ D++TY+ I + N+D + EM+ ++G S D V Y ++N Y+ A
Sbjct: 280 RMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMA-ENGVSPDVVVYNTMLNGYLRA 338
Query: 277 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQ---IW----------- 322
+ E L + + R ++Y+ LI GL K+D+ IW
Sbjct: 339 GRI--EECLELWKVMEKEGCRTVVSYNILI---RGLFENAKVDEAISIWELLPEKDCCAD 393
Query: 323 ------------------KSLRMTKQKMTSRN------YICILSSYLMLGHLKEVGEIID 358
K+L + ++ R Y +++ G L EV ++D
Sbjct: 394 SMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLD 453
Query: 359 QWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 404
Q + + CN ++ F E A F ++ K C PT
Sbjct: 454 QMTKHGCKP-NPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPT 498
Score = 41.2 bits (95), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 78/181 (43%), Gaps = 15/181 (8%)
Query: 80 VSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFG 139
VS+G TV ++ L K++R+ A + + M+ HK + + Y+ ++ G
Sbjct: 491 VSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEML-HKGWKPNMITYSLLMN------G 543
Query: 140 IHSGERYFEGLPLSAKTSE--------TYTALLHLYAGAKWTEKAEELFERVKQSNLSFN 191
+ G++ L L + E + ++H + E A +L+ +KQ N
Sbjct: 544 LCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPN 603
Query: 192 ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 251
+ +N +M + V E+ + + + I + PDI +YN+ + + I FL+
Sbjct: 604 LVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLN 663
Query: 252 E 252
+
Sbjct: 664 D 664
>gi|255552099|ref|XP_002517094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543729|gb|EEF45257.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 549
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT +H AK KA E++E +K + +A Y+ ++ + G+++ V E++
Sbjct: 341 TYTIFMHALGKAKQVNKALEVYEMMKSNCCVPDASFYSSLIFVLTQSGRLKDAWDVFEDM 400
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD 261
K++ V PD+ TYN I+S L + K L M DS D
Sbjct: 401 KKQGVSPDLLTYNTMITSACTHLEEENALKLLRRMEEDSCKPD 443
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 57/127 (44%), Gaps = 5/127 (3%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
+++ LLH Y A+ + A ++ + + + N + Y + LY + V + E
Sbjct: 270 QSFNILLHGYCKARKLDDARKIMDEMDKQGFQPNVVSYTCFIELYCKLKDFRNVEAIFSE 329
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD--EMSCDSGGSDDWVKYVNLVNIYIT 275
++ K+ P++ TY +++ + QV K L+ EM + D Y +L+ +
Sbjct: 330 MQEKSCKPNVITYTIFMHALGKA---KQVNKALEVYEMMKSNCCVPDASFYSSLIFVLTQ 386
Query: 276 ASHLVNA 282
+ L +A
Sbjct: 387 SGRLKDA 393
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 3/146 (2%)
Query: 128 ATRIDLMTKVFGIHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVKQ 185
+T ID + K I + R F+ + A Y+AL+H A+ + A E+ ++K+
Sbjct: 309 STMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKK 368
Query: 186 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 245
+ + + + YN ++ G VE +E+ PD++TYN+ +S N D
Sbjct: 369 AFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDA 428
Query: 246 VKKFLDEMSCDSGGSDDWVKYVNLVN 271
D+MS S S + V Y L++
Sbjct: 429 ACGVFDDMS-SSHCSPNVVTYGTLIS 453
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 75/173 (43%), Gaps = 8/173 (4%)
Query: 84 NQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDS-DYATRIDLMTKVFGIHS 142
N+ S L H L K+++ ALE+ M K F D+ Y ID + K + +
Sbjct: 339 NEVVYSALIH---GLCKARKMDCALEMLAQM--KKAFCTPDTITYNILIDGLCKSGDVEA 393
Query: 143 GERYFEGLPLSAKTSETYT--ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMT 200
+F+ + + + YT L+ + A T+ A +F+ + S+ S N + Y +++
Sbjct: 394 ARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLIS 453
Query: 201 LYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
Q+ K +L + +K + PD F Y+ + + ++ DEM
Sbjct: 454 GLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEM 506
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 97/250 (38%), Gaps = 13/250 (5%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYTA++ A K + A L E++ + + YN ++ +G++E+ ++ +I
Sbjct: 167 TYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKI 226
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
PD+ TY I + K EM+ G D V Y L+ + A
Sbjct: 227 VDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMAL-RGLVLDTVCYTALIRGLLQAGK 285
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLII--LYAGLGNKDKID---QIWKSLRMTKQKMT 333
+ A S K++T Q D + + + GL +I +I+KS+
Sbjct: 286 IPQASS-----VYKTMTS-QGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPN 339
Query: 334 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 393
Y ++ + E++ Q K++ + I+ N L+ G E A F
Sbjct: 340 EVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY-NILIDGLCKSGDVEAARAFF 398
Query: 394 MLLLQKNCAP 403
+L+ C P
Sbjct: 399 DEMLEAGCKP 408
>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
Length = 770
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 110/240 (45%), Gaps = 21/240 (8%)
Query: 164 LHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL---------- 213
++LY T++A LFE+++ +++ + +N M++ Y + K L
Sbjct: 323 MYLYLRKGETDEAMRLFEQMEDASI----ITWNAMISGYAQIMDSAKDDLQARSRGFQAL 378
Query: 214 -VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 272
+ ++KR + PD+FT++ +S C+A + ++Q ++ + + SG D V LVN+
Sbjct: 379 TIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQ-IHAQTIKSGFLSDVVVNSALVNM 437
Query: 273 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 332
Y + +A + L + R ++T+ +I Y+ G + Q+++ +R+ +
Sbjct: 438 YNKCGCIQDANKAFL-----EMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRP 492
Query: 333 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
++ +LS+ G ++E D K+ + + ++ F +G E A F
Sbjct: 493 NEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSF 552
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/208 (19%), Positives = 90/208 (43%), Gaps = 2/208 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y L+HL + + +A +++ R+ + + Y+ +M +E V +++E+
Sbjct: 194 SYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEM 253
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + P+I+T+ + I ID+ L M D+G D V Y L++ A
Sbjct: 254 ESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMD-DAGCGPDVVTYTVLIDALCNAGK 312
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L NA+ ++ + S + +TY L+ ++ G+ D I + W + +
Sbjct: 313 LNNAK-ELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFT 371
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATS 366
++ + +G + E +D K+ +
Sbjct: 372 ILIDALCKVGKVDEAFGTLDVMKKQGVA 399
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 87/201 (43%), Gaps = 4/201 (1%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLP--LSAKTSETYTALLHLYAGAKWTEKAEELFERVK 184
Y ID + K+ + +++FE + Y L++ + E A ELF R+
Sbjct: 896 YGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMV 955
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
+ + + Y+ M+ VG+V+ EE+K + PD+ YNL I+ + ++
Sbjct: 956 KEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVE 1015
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 304
+ DEM + G + D Y L+ + + + +V E + + TY+
Sbjct: 1016 EALSLFDEMR-NRGITPDLYTYNALI-LNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNA 1073
Query: 305 LIILYAGLGNKDKIDQIWKSL 325
LI ++ GN D+ ++K +
Sbjct: 1074 LIRGHSMSGNPDRAYAVYKKM 1094
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 125/326 (38%), Gaps = 50/326 (15%)
Query: 120 FVLSDSDYATRIDLMTKVFGIHSGERYF-----EGLPLSAKTSETYTALLHLYAGAKWTE 174
FVL+ Y I L+ K + + EG+ S KT Y+AL+ + E
Sbjct: 188 FVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKT---YSALMVALGKRRDIE 244
Query: 175 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 234
L + ++ L N + + + G++++ +++ + PD+ TY + I
Sbjct: 245 TVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLI 304
Query: 235 SS-C-AATLN---------------------------------IDQVKKFLDEMSCDSGG 259
+ C A LN +D +K+F EM D G
Sbjct: 305 DALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEAD-GY 363
Query: 260 SDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID 319
D V + L++ V+ TL +K TY+ LI L D+
Sbjct: 364 LPDVVTFTILIDALCKVGK-VDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEAL 422
Query: 320 QIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDF--DISACNRLL 377
+++ S+ + T+ YI + Y G E G+ I +++ T+ +I ACN L
Sbjct: 423 ELFNSMESLGLETTAYTYILFIDYY---GKSGESGKAIKTFEKMKTNGIVPNIVACNASL 479
Query: 378 GAFSDVGLTEKANEFHMLLLQKNCAP 403
+ ++ G E+A EF L + AP
Sbjct: 480 YSLAEQGRLEEAKEFFNGLKKCGLAP 505
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 71/165 (43%), Gaps = 5/165 (3%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
T+ TY + Y + + KA + FE++K + + N + N + G++E+
Sbjct: 436 TAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFF 495
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275
+K+ + PD TYN+ + +D K L EM + G D V +N + +
Sbjct: 496 NGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEM--EENGCDPEVVIINSLIDTLY 553
Query: 276 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQ 320
+ V+ ++ +TY+ L+ AGLG + ++ +
Sbjct: 554 KADRVDEAWKMFQRMKEMKLAPTVVTYNTLL---AGLGKEGRVQE 595
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 99/232 (42%), Gaps = 3/232 (1%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y+A++ A+ LF +++ + + YN M+ + S G+ +++E+
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
+ + PD+ TYN I++ + ++ DEM G + + Y ++++ + + L
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEM-LPRGIIPNTITYSSMIDGFCKQNRL 376
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 339
AE + A K + IT++ LI Y G D ++ + T + Y
Sbjct: 377 DAAEHMFYLMATKGCSP-NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435
Query: 340 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 391
++ + ++G L +++ + S DI C+ LL D G + A E
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCP-DIVTCDTLLDGLCDNGKLKDALE 486
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 79/187 (42%), Gaps = 7/187 (3%)
Query: 45 LDEETSNSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRY 104
LD N KD L+ +F++ ++S ++ G + V ++ L ++
Sbjct: 472 LDGLCDNGKLKDALE--MFKVM--QKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKF 527
Query: 105 KHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTA 162
A E+ E M H+ V Y++ ID + K + + F+ + + + T+T
Sbjct: 528 LEAEELYEEM-PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTT 586
Query: 163 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 222
L++ Y A + ELF + + + NA+ Y ++ + VG + + +E+
Sbjct: 587 LINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSG 646
Query: 223 VVPDIFT 229
V PD T
Sbjct: 647 VYPDTIT 653
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 78/177 (44%), Gaps = 8/177 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY AL++ + +AEEL++ + + N + Y+ M+ + +++ + +
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K P++ T+N I ID + L EM+ ++G D Y L++ +
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT-ETGLVADTTTYNTLIHGFYLVGD 445
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID---QIWKSLRMTKQKM 332
L NA L E S +T D L+ GL + K+ +++K ++ +K+ +
Sbjct: 446 L-NAALDLLQEMISSGLCPDIVTCDTLL---DGLCDNGKLKDALEMFKVMQKSKKDL 498
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 2/131 (1%)
Query: 195 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 254
YN +++ ++ G+ + + EE+ + +VPD TY+ I +D+ + D M
Sbjct: 514 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573
Query: 255 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 314
S S + V + L+N Y A V+ E + ITY LI + +GN
Sbjct: 574 SKS-FSPNVVTFTTLINGYCKAGR-VDDGLELFCEMGRRGIVANAITYITLICGFRKVGN 631
Query: 315 KDKIDQIWKSL 325
+ I++ +
Sbjct: 632 INGALDIFQEM 642
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 105/245 (42%), Gaps = 7/245 (2%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
+ +Y + H +A +L +++ + + Y+ ++ Y VG++++V ++E
Sbjct: 253 TASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIE 312
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
E++ K + P+ +TYN I T + + ++ L EM G + D V Y L++ +
Sbjct: 313 EMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREM-ISEGIAPDGVIYTTLIDGFCKL 371
Query: 277 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 336
+ V++ E +K +ITY +I G + D+++ + + +
Sbjct: 372 GN-VSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVT 430
Query: 337 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 396
Y ++ Y G +KE + +Q Q + +I L G + ANE L
Sbjct: 431 YTALIDGYCKEGKMKEAFSLHNQMLQMGLTP-NIVTYTALADGLCKCGEVDTANE----L 485
Query: 397 LQKNC 401
L + C
Sbjct: 486 LHEMC 490
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYTAL+ Y ++A L ++ Q L+ N + Y + G+V+ ++ E+
Sbjct: 430 TYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEM 489
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
RK + +I+TYN ++ NIDQ K + +M +G D V Y L++ Y +
Sbjct: 490 CRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEV-AGFHPDAVTYTTLMDAYCKSRE 548
Query: 279 LVNA 282
+V A
Sbjct: 549 MVRA 552
>gi|147779268|emb|CAN70089.1| hypothetical protein VITISV_038171 [Vitis vinifera]
Length = 838
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 112/288 (38%), Gaps = 39/288 (13%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
T +TY LL Y + EKAE +F +++ +A++YN + M G +K +
Sbjct: 131 PTEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEI 190
Query: 215 VEEIKRKNVVPDIFTYNLWIS-------------------SCAATLNI----DQVKKFLD 251
E +KR P TY + I+ S NI V F
Sbjct: 191 FERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAR 250
Query: 252 EMSCD-----------SGGSDDWVKYVNLVNIYITASHLVNA-ESSTLVEAEKSITQRQW 299
E C+ +G D Y L+ Y A A E +L++ R
Sbjct: 251 EGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRA- 309
Query: 300 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 359
+Y+ ++ Y G + +++ ++ T ++++ +LS+Y G + + EI++Q
Sbjct: 310 -SYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQ 368
Query: 360 WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
+S D N +L + +G EK E + ++K P + S
Sbjct: 369 MHKSGIKP-DTFVLNSMLNLYGRLGQFEKMEEV-LTAMEKGPYPADIS 414
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 89/202 (44%), Gaps = 37/202 (18%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNL-----SFNALM------------------- 194
T+TAL++ +A EKAEE+FE+++++ L ++NALM
Sbjct: 240 TFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLM 299
Query: 195 -----------YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 243
YN M+ Y G E V E +KR + P + ++ L +S+ + +
Sbjct: 300 QHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKV 359
Query: 244 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 303
+ ++ +++M SG D +++N+Y E L EK TY+
Sbjct: 360 AKCEEIVNQMH-KSGIKPDTFVLNSMLNLYGRLGQFEKME-EVLTAMEKGPYPADISTYN 417
Query: 304 FLIILYAGLGNKDKIDQIWKSL 325
LI +Y G +++++++SL
Sbjct: 418 ILINIYGRAGFFARMEELFRSL 439
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 85/248 (34%), Gaps = 38/248 (15%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y L+ Y +KAE + + ++ Y ++ Y + G +EK V E++
Sbjct: 101 YNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMR 160
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
+ P YN +I + + + + M D
Sbjct: 161 KYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDR---------------------- 198
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 339
Q TY LI LY +++ +R K K +
Sbjct: 199 ---------------CQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTA 243
Query: 340 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 399
+++++ G ++ EI +Q Q A + D+ A N L+ A+S G A E L+
Sbjct: 244 LVNAFAREGLCEKAEEIFEQL-QEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHM 302
Query: 400 NCAPTNAS 407
C P AS
Sbjct: 303 GCEPDRAS 310
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
T +++ LL Y+ A K EE+ ++ +S + + + N M+ LY +GQ EK+ V
Sbjct: 341 PTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEV 400
Query: 215 VEEIKRKNVVPDIFTYNLWIS 235
+ +++ DI TYN+ I+
Sbjct: 401 LTAMEKGPYPADISTYNILIN 421
>gi|302819015|ref|XP_002991179.1| hypothetical protein SELMODRAFT_448320 [Selaginella moellendorffii]
gi|300141007|gb|EFJ07723.1| hypothetical protein SELMODRAFT_448320 [Selaginella moellendorffii]
Length = 561
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 65/327 (19%), Positives = 128/327 (39%), Gaps = 42/327 (12%)
Query: 75 VIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLM 134
+++++ +GN + S + L ++ Q +K ++ +EW++ + + DY +
Sbjct: 106 ILKKYAGDGNISRESVV-GTLTRFKQMQAWKIIIKFTEWLMEQGWYNFNQKDYFLVLLAY 164
Query: 135 TKVFGIHSGERYFEGLPL--SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNA 192
K + E F+ + A E YT + Y + +KAE +F+R+ + S A
Sbjct: 165 CKDGQVDKTEGIFQRMAELGVAANIEMYTLQIEGYGRRRSFDKAEAVFQRLLTTGPSPTA 224
Query: 193 LMYNEMMTLYMSVGQ---VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 249
Y MM Y G+ V+++ +V + V PD YNL I + ++Q
Sbjct: 225 QTYQTMMKSYSEAGRLDDVQRIFKLVTDSPSPTVKPDARMYNLMIHTYGKQGKVEQAMSV 284
Query: 250 LDEM----------------SCDSGGSD---------------DWVKYVNLVNIYITA-- 276
M +C D D Y LVN Y A
Sbjct: 285 YQSMKRERVALTIVTFNSLLACQKTWKDAEDVFRKLQAAKLDPDVFSYTALVNAYAKARR 344
Query: 277 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 336
+ +A ++ A TQ + Y+ LI YA + + + K ++ T +
Sbjct: 345 AECAHAAFDDMIAAGIRPTQ---VAYNALINAYAKCKDPEGARAVLKQMKQNGCTPTVES 401
Query: 337 YICILSSYLMLGHLKEVGEIIDQWKQS 363
Y ++S+Y+ + + + + + + K++
Sbjct: 402 YTSLISAYVSVNLMAKAEQTVLRMKEA 428
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 1/119 (0%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
T Y AL++ YA K E A + +++KQ+ + Y +++ Y+SV + K
Sbjct: 362 PTQVAYNALINAYAKCKDPEGARAVLKQMKQNGCTPTVESYTSLISAYVSVNLMAKAEQT 421
Query: 215 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
V +K ++ P++ T+ + ++ A +D + + + M +G + Y LVN Y
Sbjct: 422 VLRMKEADLQPNLQTFCILMTGYANGNKLDNMMRSFETMKL-AGLEPNRHVYTVLVNAY 479
Score = 38.1 bits (87), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 64/139 (46%), Gaps = 3/139 (2%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
T E+YT+L+ Y KAE+ R+K+++L N + +MT Y + +++ +
Sbjct: 397 PTVESYTSLISAYVSVNLMAKAEQTVLRMKEADLQPNLQTFCILMTGYANGNKLDNMMRS 456
Query: 215 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274
E +K + P+ Y + +++ + + D + +M +G D + + V + I
Sbjct: 457 FETMKLAGLEPNRHVYTVLVNAYGSNDDFDSAIIWYKQM-LGTGCKPDPI--LRTVLLKI 513
Query: 275 TASHLVNAESSTLVEAEKS 293
SH E L+ +KS
Sbjct: 514 AKSHEQTEEIHELLGMQKS 532
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 125/327 (38%), Gaps = 45/327 (13%)
Query: 70 RSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYAT 129
+ A ++ + EG V ++ L K K A+E + M+T
Sbjct: 312 KHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRD----------- 360
Query: 130 RIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLS 189
+ + TY L+ E+A EL + +
Sbjct: 361 -----------------------CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGIL 397
Query: 190 FNALMYNEMMTLYMSVGQVEKVAL-VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 248
+ +N ++ + + + +VA+ + EE++ K PD FTYN+ I S + +D+
Sbjct: 398 PDVCTFNSLIQ-GLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALN 456
Query: 249 FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIIL 308
L +M SG + + Y L++ + A+ + AE E E R +TY+ LI
Sbjct: 457 MLKQMEL-SGCARSVITYNTLIDGFCKANKIREAE-EIFDEMEVHGVSRNSVTYNTLI-- 512
Query: 309 YAGLGNKDKID---QIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 365
GL +++ Q+ + M QK Y +L+ + G +K+ +I+ Q S
Sbjct: 513 -DGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIV-QAMTSNG 570
Query: 366 SDFDISACNRLLGAFSDVGLTEKANEF 392
+ DI L+ G E A++
Sbjct: 571 CEPDIVTYGTLISGLCKAGRVEVASKL 597
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 2/126 (1%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVK 184
Y T ID K I E F+ + + ++ S TY L+ ++ E A +L +++
Sbjct: 473 YNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMI 532
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
+ YN ++T + G ++K A +V+ + PDI TY IS ++
Sbjct: 533 MEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVE 592
Query: 245 QVKKFL 250
K L
Sbjct: 593 VASKLL 598
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 38/209 (18%), Positives = 87/209 (41%), Gaps = 4/209 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+ L++ A + A E+ + + Q + YN +++ +G+V++ ++++
Sbjct: 297 TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQM 356
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV-NIYITAS 277
++ P+ TYN IS+ +++ + L + G D + +L+ + +T +
Sbjct: 357 ITRDCSPNTVTYNTLISTLCKENQVEEATE-LARVLTSKGILPDVCTFNSLIQGLCLTRN 415
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
H V E E + TY+ LI G D+ + K + ++ + Y
Sbjct: 416 HRVAME--LFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITY 473
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSATS 366
++ + ++E EI D+ + S
Sbjct: 474 NTLIDGFCKANKIREAEEIFDEMEVHGVS 502
>gi|449437410|ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
gi|449519964|ref|XP_004167004.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
Length = 534
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 86/194 (44%), Gaps = 8/194 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY+ ++ + +A ++F + + + N++ +N ++ +++ G+ EKV V ++
Sbjct: 289 TYSIVIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQM 348
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS---CDSGGSDDWVKYVNLVNIYIT 275
KR D+ TYN I + N+ + K L+ M+ C S N + I
Sbjct: 349 KRLRCAADLITYNFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASS-----FNPIFRCIA 403
Query: 276 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
S VN ++ + +TY+ L+ ++A + D I ++ K + + +
Sbjct: 404 KSQDVNGAHRMFARMKEVGCKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFN 463
Query: 336 NYICILSSYLMLGH 349
Y +++ Y +GH
Sbjct: 464 TYRELIALYCGMGH 477
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 99/232 (42%), Gaps = 3/232 (1%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y+A++ A+ LF +++ + + YN M+ + S G+ +++E+
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
+ + PD+ TYN I++ + ++ DEM G + + Y ++++ + + L
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEM-LPRGIIPNTITYSSMIDGFCKQNRL 376
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 339
AE + A K + IT++ LI Y G D ++ + T + Y
Sbjct: 377 DAAEHMFYLMATKGCSP-NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435
Query: 340 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 391
++ + ++G L +++ + S DI C+ LL D G + A E
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCP-DIVTCDTLLDGLCDNGKLKDALE 486
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 79/187 (42%), Gaps = 7/187 (3%)
Query: 45 LDEETSNSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRY 104
LD N KD L+ +F++ ++S ++ G + V ++ L ++
Sbjct: 472 LDGLCDNGKLKDALE--MFKVM--QKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKF 527
Query: 105 KHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTA 162
A E+ E M H+ V Y++ ID + K + + F+ + + + T+T
Sbjct: 528 LEAEELYEEM-PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTT 586
Query: 163 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 222
L++ Y A + ELF + + + NA+ Y ++ + VG + + +E+
Sbjct: 587 LINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSG 646
Query: 223 VVPDIFT 229
V PD T
Sbjct: 647 VYPDTIT 653
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 78/177 (44%), Gaps = 8/177 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY AL++ + +AEEL++ + + N + Y+ M+ + +++ + +
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K P++ T+N I ID + L EM+ ++G D Y L++ +
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT-ETGLVADTTTYNTLIHGFYLVGD 445
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID---QIWKSLRMTKQKM 332
L NA L E S +T D L+ GL + K+ +++K ++ +K+ +
Sbjct: 446 L-NAALDLLQEMISSGLCPDIVTCDTLL---DGLCDNGKLKDALEMFKVMQKSKKDL 498
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 2/131 (1%)
Query: 195 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 254
YN +++ ++ G+ + + EE+ + +VPD TY+ I +D+ + D M
Sbjct: 514 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573
Query: 255 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 314
S S + V + L+N Y A V+ E + ITY LI + +GN
Sbjct: 574 SKS-FSPNVVTFTTLINGYCKAGR-VDDGLELFCEMGRRGIVANAITYITLICGFRKVGN 631
Query: 315 KDKIDQIWKSL 325
+ I++ +
Sbjct: 632 INGALDIFQEM 642
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 99/232 (42%), Gaps = 3/232 (1%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y+A++ A+ LF +++ + + YN M+ + S G+ +++E+
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
+ + PD+ TYN I++ + ++ DEM G + + Y ++++ + + L
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEM-LPRGIIPNTITYSSMIDGFCKQNRL 376
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 339
AE + A K + IT++ LI Y G D ++ + T + Y
Sbjct: 377 DAAEHMFYLMATKGCSP-NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435
Query: 340 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 391
++ + ++G L +++ + S DI C+ LL D G + A E
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCP-DIVTCDTLLDGLCDNGKLKDALE 486
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 79/187 (42%), Gaps = 7/187 (3%)
Query: 45 LDEETSNSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRY 104
LD N KD L+ +F++ ++S ++ G + V ++ L ++
Sbjct: 472 LDGLCDNGKLKDALE--MFKVM--QKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKF 527
Query: 105 KHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTA 162
A E+ E M H+ V Y++ ID + K + + F+ + + + T+T
Sbjct: 528 LEAEELYEEM-PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTT 586
Query: 163 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 222
L++ Y A + ELF + + + NA+ Y ++ + VG + + +E+
Sbjct: 587 LINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSG 646
Query: 223 VVPDIFT 229
V PD T
Sbjct: 647 VYPDTIT 653
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 78/177 (44%), Gaps = 8/177 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY AL++ + +AEEL++ + + N + Y+ M+ + +++ + +
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K P++ T+N I ID + L EM+ ++G D Y L++ +
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT-ETGLVADTTTYNTLIHGFYLVGD 445
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID---QIWKSLRMTKQKM 332
L NA L E S +T D L+ GL + K+ +++K ++ +K+ +
Sbjct: 446 L-NAALDLLQEMISSGLCPDIVTCDTLL---DGLCDNGKLKDALEMFKVMQKSKKDL 498
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 2/131 (1%)
Query: 195 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 254
YN +++ ++ G+ + + EE+ + +VPD TY+ I +D+ + D M
Sbjct: 514 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573
Query: 255 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 314
S S + V + L+N Y A V+ E + ITY LI + +GN
Sbjct: 574 SKS-FSPNVVTFTTLINGYCKAGR-VDDGLELFCEMGRRGIVANAITYITLICGFRKVGN 631
Query: 315 KDKIDQIWKSL 325
+ I++ +
Sbjct: 632 INGALDIFQEM 642
>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g64583, mitochondrial; Flags: Precursor
gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
Length = 512
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 97/240 (40%), Gaps = 35/240 (14%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+TAL+ ++ ++A+EL++ + QS++ N + YN ++ G++ + +
Sbjct: 248 TFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLM 307
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K P++ TYN IS +D+ K MSC+ G + D Y L++ Y
Sbjct: 308 ASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE-GFNADIFTYNTLIHGYCQVGK 366
Query: 279 L------------------------------VNAE-SSTLVEAEKSITQRQWITYDFLII 307
L VN E S LV+ + ++I I
Sbjct: 367 LRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNI 426
Query: 308 LYAGLGNKDKIDQIWK---SLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
+ GL DK+++ W+ L + K +R Y ++ G +E E+I + K+
Sbjct: 427 MIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEG 486
>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 79/172 (45%), Gaps = 2/172 (1%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
A + TY L+ KAE L ER+K+++++ +N +M + GQ++K
Sbjct: 244 ACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALS 303
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
+E++K + P + TYN+ IS + N V + + EM D G S V Y L+N +
Sbjct: 304 YLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREME-DRGISPSKVTYTILMNTF 362
Query: 274 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 325
+ + + A + + Q TY LI GN + +++KS+
Sbjct: 363 VRSDDIEKAYEMFHLMKRIGLVPDQH-TYGVLIHGLCIKGNMVEASKLYKSM 413
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 49/95 (51%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +L+ Y A ++F+ + + ++ NA+ YN ++ GQV K ++E +
Sbjct: 214 TYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERM 273
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
KR ++ P T+N+ + T +D+ +L+++
Sbjct: 274 KRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKL 308
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 40/234 (17%), Positives = 89/234 (38%), Gaps = 48/234 (20%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
A YT +++ + + + EL++++K + N YN ++T Y G++
Sbjct: 174 AANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFK 233
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS------------------C 255
V +EI ++ V + TYN+ I + + + L+ M C
Sbjct: 234 VFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLC 293
Query: 256 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 315
++G D + Y+ + + LV TY+ LI ++ +GN
Sbjct: 294 NTGQLDKALSYLEKLKLIGLCPTLV--------------------TYNILISGFSKVGNS 333
Query: 316 DKIDQIWKSLRMTKQKMTSRNYICILSSYL----------MLGHLKEVGEIIDQ 359
+ ++ + + + Y ++++++ M +K +G + DQ
Sbjct: 334 SVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQ 387
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 100/239 (41%), Gaps = 8/239 (3%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
YT L+ ++A+ +F R+ L+ N +Y M+ + G + + +++K
Sbjct: 145 YTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMK 204
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
V+P+++TYN I+ + K DE+S G + + V Y L+ +
Sbjct: 205 LVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEIS-KRGVACNAVTYNILIGGLCRKGQV 263
Query: 280 VNAES--STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
AE + A + T R T++ L+ G DK + L++ T Y
Sbjct: 264 SKAEGLLERMKRAHINPTTR---TFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTY 320
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE-FHML 395
++S + +G+ V E++ + + S ++ L+ F EKA E FH++
Sbjct: 321 NILISGFSKVGNSSVVSELVREMEDRGISPSKVTY-TILMNTFVRSDDIEKAYEMFHLM 378
>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 86/193 (44%), Gaps = 2/193 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT L+ G T++A +L + + + NA+ YN ++ G V +VE +
Sbjct: 319 TYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELM 378
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD-DWVKYVNLVNIYITAS 277
K++ PD TYN+ + A ++D+ K L M DS +D D + Y L++ +
Sbjct: 379 KKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKEN 438
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
L A + EK + +T + L+ G+ +K ++WK + +K S Y
Sbjct: 439 RLHQALDIYDLLVEK-LGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTY 497
Query: 338 ICILSSYLMLGHL 350
++ + G L
Sbjct: 498 TAMIDGFCKTGML 510
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 1/131 (0%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
+ S+TYTA++ + A+ L +++ S L + YN +++ G +++
Sbjct: 491 VRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWR 550
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
+ EE++R N PD+ ++N+ I +I + L MS +G S D Y L+N +
Sbjct: 551 LFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMS-RAGLSPDLFTYSKLINRF 609
Query: 274 ITASHLVNAES 284
+ +L A S
Sbjct: 610 LKLGYLDEAIS 620
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 103/240 (42%), Gaps = 3/240 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y ++ + K EKA EL +K S S++ + + ++ + G++++ ++E+
Sbjct: 179 SYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEM 238
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K + D+ Y I +D+ K DE+ + G S + Y L+ +
Sbjct: 239 KFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV-LERGDSPCAITYNTLIRGFCKLGQ 297
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L A E+ + + TY LI G+G + Q+ + ++ + Y
Sbjct: 298 LKEASEIFEFMIERGVRPNVY-TYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYN 356
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
I++ G + + EI++ K+ T +I+ N LLG G ++A++ L+L+
Sbjct: 357 IIINKLCKDGLVADAVEIVELMKKRRTRPDNITY-NILLGGLCAKGDLDEASKLLYLMLK 415
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 2/166 (1%)
Query: 152 LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 211
L A T LL+ A KA EL++++ S + N+ Y M+ + G +
Sbjct: 454 LGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVA 513
Query: 212 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
++ +++ + P +F YN +SS ++DQ + +EM D+ D V + +++
Sbjct: 514 KGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFP-DVVSFNIMID 572
Query: 272 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 317
+ A + +AE S LV ++ TY LI + LG D+
Sbjct: 573 GSLKAGDIKSAE-SLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDE 617
>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 465
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/301 (19%), Positives = 123/301 (40%), Gaps = 17/301 (5%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
A +V + + G ++K L + AL + +V F + Y T I
Sbjct: 141 AFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVA-LGFQFNQISYGTLI 199
Query: 132 DLMTKVFGIHSGE--------RYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERV 183
D + KV GE R +G L Y+ ++ K A +L+ +
Sbjct: 200 DGLCKV-----GETRAALDLLRRVDG-KLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEM 253
Query: 184 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 243
+S N + Y+ +++ + +VG+++ + ++ +N+ PD++T+N+ + + I
Sbjct: 254 VSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKI 313
Query: 244 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 303
K +DEM D G + V Y ++++ + +H V+ + L + + + TY
Sbjct: 314 SYALKLVDEMH-DRGQPPNIVTYSSILDA-LCKTHRVDKAVALLTKLKDQGIRPNMHTYT 371
Query: 304 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 363
LI G + I++ L + +T YI + + G E ++ + +++
Sbjct: 372 ILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEEN 431
Query: 364 A 364
Sbjct: 432 G 432
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 99/249 (39%), Gaps = 3/249 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +L+ E+A E+ ++ + S N + YN +++ QVE+ + +
Sbjct: 353 TYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVL 412
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K ++PD+ T+N I T N + +EM G D Y L++ +
Sbjct: 413 TSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMK-TKGCHPDEFTYNMLIDSLCSRGR 471
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L A S L E E S R +TY+ LI + ++ ++I+ + + Y
Sbjct: 472 LEEA-LSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYN 530
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
++ ++E +++DQ D N LL F G +KA + +
Sbjct: 531 TLIDGLCKNRRVEEAAQLMDQMLMEGLKP-DKFTYNSLLTYFCRAGDIKKAADIVQTMTS 589
Query: 399 KNCAPTNAS 407
C P + +
Sbjct: 590 NGCEPDSVT 598
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 16/207 (7%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
AT + + S+G V +++ L + ++ A+E+ E M T K + Y I
Sbjct: 405 ATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKT-KGCHPDEFTYNMLI 463
Query: 132 DLMTKVFGIHSGERYFEGLPL--------SAKTSETYTALLHLYAGAKWTEKAEELFERV 183
D + S R E L L ++ TY L+ + K E+AEE+F+ +
Sbjct: 464 D------SLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEM 517
Query: 184 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 243
+ +S N + YN ++ +VE+ A +++++ + + PD FTYN ++ +I
Sbjct: 518 ELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDI 577
Query: 244 DQVKKFLDEMSCDSGGSDDWVKYVNLV 270
+ + M+ +G D V Y L+
Sbjct: 578 KKAADIVQTMT-SNGCEPDSVTYGTLI 603
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 57/313 (18%), Positives = 125/313 (39%), Gaps = 6/313 (1%)
Query: 98 LRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTS 157
LR+ L++ +W FV S Y + + K S R + + +
Sbjct: 79 LRRQSDEDSILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEI 138
Query: 158 E--TYTALLHLYAGAKWTEKAEELFERVKQS-NLSFNALMYNEMMTLYMSVGQVEKVALV 214
T+ L+ YA + ++A + + +++ L +A YN ++ + + +++ V +V
Sbjct: 139 RRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIV 198
Query: 215 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274
+ + + PD+ T+N+ I + I ++EM G S D + L+ +I
Sbjct: 199 NSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMG-SYGLSPDEKTFTTLMQGFI 257
Query: 275 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 334
++ N + + +T + L+ Y G +++ + +
Sbjct: 258 EEGNM-NGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDR 316
Query: 335 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 394
+ +++ +GH+K EI+D Q D DI N L+ +G E+A E
Sbjct: 317 FTFNSLVNGLCRIGHVKHALEILDVMLQEGF-DPDIFTYNSLIFGLCKLGEVEEAVEILN 375
Query: 395 LLLQKNCAPTNAS 407
++ ++ +P +
Sbjct: 376 QMILRDFSPNTVT 388
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 57/316 (18%), Positives = 123/316 (38%), Gaps = 6/316 (1%)
Query: 78 RWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKV 137
R VS G + V+ ++K L ++ + + A+ + E M ++ + + T + +
Sbjct: 201 RMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYG-LSPDEKTFTTLMQGFIEE 259
Query: 138 FGIHSGERYFEGLPLSAKTSETYTA--LLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 195
++ R E + + S T L+H Y E+ + + + +
Sbjct: 260 GNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTF 319
Query: 196 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 255
N ++ +G V+ +++ + ++ PDIFTYN I +++ + L++M
Sbjct: 320 NSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMIL 379
Query: 256 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 315
S + V Y L++ + + A V K I T++ LI N
Sbjct: 380 RD-FSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILP-DVCTFNSLIQGLCLTNNH 437
Query: 316 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNR 375
++++ ++ Y ++ S G L+E ++ + + S S ++ N
Sbjct: 438 RLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSR-NVVTYNT 496
Query: 376 LLGAFSDVGLTEKANE 391
L+ F E+A E
Sbjct: 497 LIDGFCKNKRIEEAEE 512
>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
Length = 479
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T ALL L A+ +E+ +F R+ + NAL Y ++ G+++K + E+
Sbjct: 2 TCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEM 61
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
R+ +VPD+FTYN+ I + I + +F + M D V Y L+
Sbjct: 62 AREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMP-----EPDVVTYNTLLG 109
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 101/257 (39%), Gaps = 9/257 (3%)
Query: 75 VIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLM 134
V +R S+ + +++K L ++ + A M K V Y ID +
Sbjct: 22 VFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREK-LVPDVFTYNVVIDTL 80
Query: 135 TKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALM 194
K I +FE +P TY LL +A LF ++ + ++ + +
Sbjct: 81 CKARRISRAIEFFETMP--EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVT 138
Query: 195 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 254
Y ++ ++ + Q E +++ + + P +++Y I+ +DQ + +EM
Sbjct: 139 YTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMK 198
Query: 255 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 314
+G D V Y L++ L A+ V E Q IT+ LI GL
Sbjct: 199 L-AGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGF-QPDKITFTALI---EGLCT 253
Query: 315 KDKIDQIWKSLR-MTKQ 330
D+I + + + M KQ
Sbjct: 254 TDRIKEAFVLFQGMAKQ 270
>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
Length = 770
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 110/240 (45%), Gaps = 21/240 (8%)
Query: 164 LHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL---------- 213
++LY T++A LFE+++ +++ + +N M++ Y + K L
Sbjct: 323 MYLYLRKGETDEAMRLFEQMEDASI----ITWNAMISGYAQIMDSAKDDLQARSRGFQAL 378
Query: 214 -VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 272
+ ++KR + PD+FT++ +S C+A + ++Q ++ + + SG D V LVN+
Sbjct: 379 TIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQ-IHAQTIKSGFLSDVVVNSALVNM 437
Query: 273 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 332
Y + +A + L + R ++T+ +I Y+ G + Q+++ +R+ +
Sbjct: 438 YNKCGCIQDANKAFL-----EMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRP 492
Query: 333 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
++ +LS+ G ++E D K+ + + ++ F +G E A F
Sbjct: 493 NEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSF 552
>gi|15232734|ref|NP_187576.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75204290|sp|Q9SF38.1|PP222_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g09650, chloroplastic; AltName: Full=Protein HIGH
CHLOROPHYLL FLUORESCENCE 152; Flags: Precursor
gi|6682243|gb|AAF23295.1|AC016661_20 hypothetical protein [Arabidopsis thaliana]
gi|332641272|gb|AEE74793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 778
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 104/286 (36%), Gaps = 56/286 (19%)
Query: 109 EISEWMVTH--KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHL 166
E+SE V K+ + + D + L+ KVF A S YT L+
Sbjct: 379 EVSEEGVVDVFKKLLPNSVDPSGEPPLLPKVF---------------APDSRIYTTLMKG 423
Query: 167 Y---AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNV 223
Y T + E R N + + Y +++ +++ G +++ V+ E+ R V
Sbjct: 424 YMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGV 483
Query: 224 VPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAE 283
+ TYN+ + L ID+ + L EM+ D+G D V Y NI I L++
Sbjct: 484 PANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSY----NIIIDGCILIDDS 539
Query: 284 SSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSS 343
+ L + +R T +Y ++ +
Sbjct: 540 AGALA--------------------------------FFNEMRTRGIAPTKISYTTLMKA 567
Query: 344 YLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
+ M G K + D+ D+ A N L+ + +GL E A
Sbjct: 568 FAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDA 613
>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 105/247 (42%), Gaps = 38/247 (15%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
TY+ L++ + + +++E +K+S + NA YN +++ Y + G V+K V
Sbjct: 228 PHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFA 287
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
E++ K + + TYN+ I + + KKF + VK V+ VN
Sbjct: 288 EMREKGIACGVMTYNILIGG------LCRGKKF-----------GEAVKLVHKVN----- 325
Query: 277 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 336
K +TY+ LI + +G D +++ L+ + T
Sbjct: 326 ---------------KVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVT 370
Query: 337 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 396
Y +++ Y + +L +++ + ++ + ++ L+ AF+ + TEKA E H L+
Sbjct: 371 YNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTY-TILIDAFARLNYTEKACEMHSLM 429
Query: 397 LQKNCAP 403
+ P
Sbjct: 430 EKSGLVP 436
>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 625
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 105/225 (46%), Gaps = 7/225 (3%)
Query: 161 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 220
T LL+ A + T+ ++++++ + + N +YN ++ G VEK ++ E++
Sbjct: 169 TVLLNSLAKDRLTDMVWKVYKKMARIGVEANIHVYNVLIHACCKSGDVEKADNLLSEMES 228
Query: 221 KNVVPDIFTYNLWIS-SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
K V PD+FTYN IS C ++ + + D M G D V Y +L++ + +
Sbjct: 229 KCVFPDLFTYNTLISLYCKKGMHYEAL-SVQDRME-REGIKPDIVTYNSLIHGFCKEGRM 286
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 339
E+ L + + T +TY LI Y L + D+ ++ + + T Y
Sbjct: 287 --REAMRLFKEIRDATPNH-VTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNS 343
Query: 340 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 384
IL +G +++ +++++ + +++ CN L+ A+ +G
Sbjct: 344 ILRKLCEIGRIRDANKLLNEMSEKKIEPDNVT-CNTLINAYCKIG 387
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 47/249 (18%), Positives = 103/249 (41%), Gaps = 9/249 (3%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
Y L+H + EKA+ L ++ + + YN +++LY G + V +
Sbjct: 201 HVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDR 260
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
++R+ + PDI TYN I + + + E+ + + V Y L++ Y +
Sbjct: 261 MEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEI---RDATPNHVTYTTLIDGYCRLN 317
Query: 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
L A E E +TY+ ++ +G +++ M+++K+ N
Sbjct: 318 DLDQA-LRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLN--EMSEKKIEPDNV 374
Query: 338 IC--ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 395
C ++++Y +G +K ++ ++ ++ D L+ F + + A E +
Sbjct: 375 TCNTLINAYCKIGDMKSALKVKNRMVEAGLK-LDQFTYKALIHGFCKIREMDGAKELLLS 433
Query: 396 LLQKNCAPT 404
+L +P+
Sbjct: 434 MLDAGFSPS 442
>gi|2980784|emb|CAA18211.1| puative protein [Arabidopsis thaliana]
gi|7269983|emb|CAB79800.1| puative protein [Arabidopsis thaliana]
Length = 1075
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 4/124 (3%)
Query: 147 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 206
F+G +S E Y LL Y K EK + +R+K+S + YN M+ +Y G
Sbjct: 932 FDGFSVSL---EAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQG 988
Query: 207 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 266
+++VA V++E+K + PD+ +YN I + +++ + EM + D V Y
Sbjct: 989 WIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDK-VTY 1047
Query: 267 VNLV 270
NLV
Sbjct: 1048 TNLV 1051
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/241 (19%), Positives = 99/241 (41%), Gaps = 4/241 (1%)
Query: 163 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 222
+L +Y +K + L+ R+++S + +N MYN ++ +++++ EE+ R
Sbjct: 806 MLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYG 865
Query: 223 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 282
P+ T+N+ + +V + + G D + Y ++ Y N
Sbjct: 866 FTPNTVTFNVLLDVYGKAKLFKKVNELF--LLAKRHGVVDVISYNTIIAAYGKNKDYTNM 923
Query: 283 ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILS 342
SS + + Y+ L+ Y +K I K ++ + Y +++
Sbjct: 924 -SSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMIN 982
Query: 343 SYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCA 402
Y G + EV +++ + K+S D+ + N L+ A+ G+ E+A + +N
Sbjct: 983 IYGEQGWIDEVADVLKELKESGLGP-DLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNII 1041
Query: 403 P 403
P
Sbjct: 1042 P 1042
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 60/149 (40%), Gaps = 35/149 (23%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSN----LSFNALM-------------------- 194
T+ LL +Y AK +K ELF K+ +S+N ++
Sbjct: 872 TFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQ 931
Query: 195 ----------YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
YN ++ Y Q+EK +++ +K+ PD +TYN+ I+ ID
Sbjct: 932 FDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWID 991
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
+V L E+ +SG D Y L+ Y
Sbjct: 992 EVADVLKELK-ESGLGPDLCSYNTLIKAY 1019
>gi|293335157|ref|NP_001169529.1| uncharacterized protein LOC100383403 [Zea mays]
gi|224029903|gb|ACN34027.1| unknown [Zea mays]
gi|414887232|tpg|DAA63246.1| TPA: hypothetical protein ZEAMMB73_160132 [Zea mays]
Length = 819
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/321 (18%), Positives = 126/321 (39%), Gaps = 13/321 (4%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGER-YFEGLPL 152
+++E+ S KHA+ + WM + + + Y I L + + +FE
Sbjct: 123 LIREIAISGSLKHAVHVFRWMKNQENYCARNDIYGMMIRLHARHNKVDQARGLFFEMQEW 182
Query: 153 SAKT-SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 211
K ++TY +L+H +A A A + + ++++ + + YN ++ + G +K
Sbjct: 183 RCKPNTDTYNSLIHAHARAGQWCWAINIMDDMQRAAIPPSRTTYNNVINACGAAGNWKKA 242
Query: 212 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL-- 269
+ +++ V PD+ T+N+ +S+ + + + M D + +
Sbjct: 243 LELCKKMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKSSKVAPDTCTMNIVIHC 302
Query: 270 ---VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 326
+ +Y A L N+ + ++ +TY ++ Y+ G + ++ +
Sbjct: 303 LVKIGLYGEAIELFNS-----MRERRTTCHPDVVTYTSIMYSYSVCGQAENCKAVFDIMV 357
Query: 327 MTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLT 386
+ +Y +L +Y G E E KQ+ DI + LL A+
Sbjct: 358 AEGVRPNIVSYNALLGAYASHGMHTEALETFKLLKQNGLRP-DIVSYTSLLNAYGRSAQP 416
Query: 387 EKANEFHMLLLQKNCAPTNAS 407
EKA E + + C P S
Sbjct: 417 EKAREVFNEMRKNACKPNKVS 437
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 101/231 (43%), Gaps = 3/231 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+YT+LL+ Y + EKA E+F ++++ N + YN ++ Y S G +++ ++ E+
Sbjct: 402 SYTSLLNAYGRSAQPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEM 461
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
++ + PD+ + + +++C + ++ L G + V Y + + Y++
Sbjct: 462 EQDGIQPDVISISTLLTACGRCKQLTKIDIILAAAK-SRGIQLNTVAYNSGIGSYLSLGD 520
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
A + +TY+ LI LG + + ++ + +T Y
Sbjct: 521 YKKA-LVLYTSMRAGNVKPDAVTYNILISGSCKLGRYVESLKFFEDMLDLNIHLTKEVYS 579
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
++ SY+ G L E + K++ D+ L+ A+SD G +A
Sbjct: 580 SVICSYVKQGKLTEAASTFNSMKETGCFP-DVLTYTTLIKAYSDDGSWRRA 629
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 79/194 (40%), Gaps = 2/194 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y ALL YA +A E F+ +KQ+ L + + Y ++ Y Q EK V E+
Sbjct: 367 SYNALLGAYASHGMHTEALETFKLLKQNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNEM 426
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
++ P+ +YN I + + + + L EM D G D + L+
Sbjct: 427 RKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQD-GIQPDVISISTLLTACGRCKQ 485
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L + L A+ Q + Y+ I Y LG+ K ++ S+R K + Y
Sbjct: 486 LTKID-IILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKALVLYTSMRAGNVKPDAVTYN 544
Query: 339 CILSSYLMLGHLKE 352
++S LG E
Sbjct: 545 ILISGSCKLGRYVE 558
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 88/194 (45%), Gaps = 2/194 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT++++ Y+ E + +F+ + + N + YN ++ Y S G + + +
Sbjct: 332 TYTSIMYSYSVCGQAENCKAVFDIMVAEGVRPNIVSYNALLGAYASHGMHTEALETFKLL 391
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K+ + PDI +Y +++ + ++ ++ +EM ++ + V Y L++ Y +A
Sbjct: 392 KQNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNEMRKNACKPNK-VSYNALIDAYGSAGM 450
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L A S L E E+ Q I+ L+ KID I + + ++ + Y
Sbjct: 451 LKEA-ISLLHEMEQDGIQPDVISISTLLTACGRCKQLTKIDIILAAAKSRGIQLNTVAYN 509
Query: 339 CILSSYLMLGHLKE 352
+ SYL LG K+
Sbjct: 510 SGIGSYLSLGDYKK 523
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/207 (19%), Positives = 89/207 (42%), Gaps = 2/207 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y L+HL + +A E++ R+ L + ++ +M E V ++EE+
Sbjct: 196 SYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEM 255
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + P+I+TY + I ID+ + + M D G D V Y L++ TA
Sbjct: 256 ESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRME-DDGCGPDVVTYTVLIDALCTAGK 314
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L +A V+ + S + +TY ++ ++ G+ ++ + W + +
Sbjct: 315 LDDA-MELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFT 373
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSAT 365
++++ G++ E ++D ++
Sbjct: 374 ILVNALCKAGNIDEAFHLLDVMRKQGV 400
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 86/187 (45%), Gaps = 9/187 (4%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
A ++ VS T +L L KS R + A E+ E MV + +++ Y I
Sbjct: 879 ALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYG-CRPNNAIYNILI 937
Query: 132 DLMTKVFGIHSGERYF-----EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQS 186
+ K +++ F EG+ K+ YT+L+ A + A FE++KQ+
Sbjct: 938 NGFGKTGDVNTACELFKRMVREGIRPDLKS---YTSLVGCLCEAGRVDDALHYFEKLKQT 994
Query: 187 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 246
L +++ YN M+ ++E+ + +E++ + + PD+FTYN I + ++Q
Sbjct: 995 GLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQA 1054
Query: 247 KKFLDEM 253
K +E+
Sbjct: 1055 GKLYEEL 1061
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 102/247 (41%), Gaps = 7/247 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT L+ A + A ELF ++K S+ + + Y M+ + G + +V E+
Sbjct: 301 TYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEM 360
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ PD+ T+ + +++ NID+ LD M G + Y L++ + +
Sbjct: 361 EADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMR-KQGVLPNLHTYNTLISGLLRVNR 419
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L +A E TY I Y G DK + ++ +++ + +
Sbjct: 420 LDDA-LDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKI--RGIAPNIVA 476
Query: 339 CILSSYLM--LGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 396
C S Y + +G L+E I ++ K + + D N ++ +S G ++A E +
Sbjct: 477 CNASLYSLAEMGRLREAKVIFNRLKSNGLAP-DSVTYNMMMKCYSKAGQVDEAIELLSDM 535
Query: 397 LQKNCAP 403
+ C P
Sbjct: 536 SENQCEP 542
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 75/167 (44%), Gaps = 5/167 (2%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
T+ TY + Y + ++KA E FE++K ++ N + N + +G++ + +
Sbjct: 436 VPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKV 495
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
+ +K + PD TYN+ + + +D+ + L +MS ++ D + +L+N
Sbjct: 496 IFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMS-ENQCEPDIIVINSLINTL 554
Query: 274 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQ 320
A V+ + +TY+ LI AGLG + ++ +
Sbjct: 555 YKAGR-VDEAWKMFCRLKDMKLAPTVVTYNTLI---AGLGKEGQVQR 597
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 39/196 (19%), Positives = 81/196 (41%), Gaps = 2/196 (1%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
+ T TY LL + E+A+ELFE + N +YN ++ + G V
Sbjct: 892 SPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACE 951
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
+ + + R+ + PD+ +Y + +D + +++ +G D + Y NL+
Sbjct: 952 LFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLK-QTGLYLDSIAY-NLMIDG 1009
Query: 274 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
+ SH + + E + TY+ LI+ G ++ ++++ L+ +
Sbjct: 1010 LGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPN 1069
Query: 334 SRNYICILSSYLMLGH 349
Y ++ Y M G+
Sbjct: 1070 VFTYNALIRGYSMSGN 1085
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 60/298 (20%), Positives = 120/298 (40%), Gaps = 45/298 (15%)
Query: 147 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 206
EGL S KT ++AL+ + TE + L E ++ L N Y + + G
Sbjct: 222 LEGLKPSLKT---FSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAG 278
Query: 207 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 266
++++ +++ ++ PD+ TY + I + +D + +M S D V Y
Sbjct: 279 RIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASS-HKPDRVTY 337
Query: 267 VNLVNIY-------------------------ITASHLVNA--ESSTLVEAEK--SITQR 297
+ +++ + IT + LVNA ++ + EA + ++
Sbjct: 338 ITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRK 397
Query: 298 QWI-----TYDFLIILYAGLGNKDKID---QIWKSLRMTKQKMTSRNYICILSSYLMLGH 349
Q + TY+ LI +GL +++D ++ ++ T+ YI + Y G
Sbjct: 398 QGVLPNLHTYNTLI---SGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGR 454
Query: 350 LKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
+ E ++ K + +I ACN L + +++G +A L AP + +
Sbjct: 455 SDKALETFEKMKIRGIAP-NIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVT 511
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 2/148 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT L+ Y + EKA L ++ QS L+ N + Y + +GQV+ ++ E+
Sbjct: 152 TYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEM 211
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K + +I TYN ++ + NI Q K ++EM +G D + + L++ Y
Sbjct: 212 CGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEV-AGMYPDTITFTTLMDAYCKTGE 270
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLI 306
+V A L E Q IT++ L+
Sbjct: 271 MVKAH-ELLREMLDRGLQPTVITFNVLM 297
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 90/208 (43%), Gaps = 7/208 (3%)
Query: 195 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 254
Y+ ++ Y G+++KV +++E++ K + P+++TYN I + +D ++ L EM
Sbjct: 13 YSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMI 72
Query: 255 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 314
+ G D V Y L++ + + + A E EK +I Y +I G
Sbjct: 73 -NQGIVPDTVVYTTLIDGFCKLGN-IQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGK 130
Query: 315 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 374
+ D+++ + + Y ++ Y G +++ + +Q QS + ++
Sbjct: 131 MMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP-NVVTYT 189
Query: 375 RLLGAFSDVGLTEKANEFHMLLLQKNCA 402
L +G + ANE LL + C
Sbjct: 190 ALADGLCKLGQVDTANE----LLHEMCG 213
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 56/288 (19%), Positives = 118/288 (40%), Gaps = 6/288 (2%)
Query: 75 VIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLM 134
+IQ +G + + I+ L KS + A + M+ ++ V Y T ID
Sbjct: 32 LIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMI-NQGIVPDTVVYTTLIDGF 90
Query: 135 TKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNA 192
K+ I + + F+ + + YTA++ +A+++F ++ + +
Sbjct: 91 CKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDE 150
Query: 193 LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 252
+ Y ++ Y G++EK + ++ + + P++ TY +D + L E
Sbjct: 151 VTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHE 210
Query: 253 MSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL 312
M C G + Y +LVN + ++ A + E E + IT+ L+ Y
Sbjct: 211 M-CGKGLQLNICTYNSLVNGLCKSGNIRQA-VKLMEEMEVAGMYPDTITFTTLMDAYCKT 268
Query: 313 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW 360
G K ++ + + + T + +++ + M G L++ GE + W
Sbjct: 269 GEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLED-GERLLAW 315
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 52/280 (18%), Positives = 102/280 (36%), Gaps = 36/280 (12%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y+ +++ Y +K +L + ++ L N YN ++ L G+V+ V+ E+
Sbjct: 12 SYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREM 71
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS------------------CDSGG- 259
+ +VPD Y I NI K DEM C G
Sbjct: 72 INQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKM 131
Query: 260 ---------------SDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 304
D V Y L++ Y + + A S + +T +TY
Sbjct: 132 MEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP-NVVTYTA 190
Query: 305 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
L LG D +++ + ++ Y +++ G++++ +++++ + +
Sbjct: 191 LADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAG 250
Query: 365 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 404
D L+ A+ G KA+E +L + PT
Sbjct: 251 MYP-DTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPT 289
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 94/242 (38%), Gaps = 15/242 (6%)
Query: 134 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 193
M K F +H+ + GL TYTAL + A EL + L N
Sbjct: 166 MEKAFSLHN-QMVQSGL---TPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNIC 221
Query: 194 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
YN ++ G + + ++EE++ + PD T+ + + T + + + L EM
Sbjct: 222 TYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREM 281
Query: 254 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 313
D G + + L+N + + L + E EK I TY+ L+ Y
Sbjct: 282 L-DRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNT-TTYNSLMKQYCIRN 339
Query: 314 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW---KQSATSDFDI 370
N +I+K + S Y + L+ GH K + + W K+ A F++
Sbjct: 340 NMRCTTEIYKGMCARGVMPDSNTY-----NILIKGHCK-ARNMKEAWFLHKEMAEKGFNL 393
Query: 371 SA 372
+A
Sbjct: 394 TA 395
>gi|297805706|ref|XP_002870737.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316573|gb|EFH46996.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 680
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 66/321 (20%), Positives = 136/321 (42%), Gaps = 17/321 (5%)
Query: 91 LRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYA----TRIDLMTKVFGIHSGERY 146
+R ++ L + ++ +L + +W+ H+E + S +A R L K FGI G
Sbjct: 124 IRFMVSLLSRENDWQRSLALLDWV--HEEAKYTPSVFAYNVVLRNVLRAKQFGIAHG--L 179
Query: 147 FEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMS 204
F+ + A + TY+ L+ + + A ++++Q +S + ++Y+ ++ L
Sbjct: 180 FDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRR 239
Query: 205 VGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWV 264
+ K + +KR + PD+ YN I+ + + + EM+ ++G S + V
Sbjct: 240 LCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFKEARVLIKEMN-EAGVSPNTV 298
Query: 265 KYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS 324
Y L+++Y+ + A S E ++ T + +I +Y L + D+++ S
Sbjct: 299 SYSTLLSVYVENHKFLEA-LSVFAEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWS 357
Query: 325 LRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD--ISACNRLLGAFSD 382
LR + +Y IL Y G + GE I ++ D + + N ++ +
Sbjct: 358 LRKMDIEPNVVSYNTILRVY---GEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGK 414
Query: 383 VGLTEKANEFHMLLLQKNCAP 403
EKA + + P
Sbjct: 415 TMEHEKATNLVQEMQSRGIEP 435
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 1/115 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y +L +Y A+ +A LF +++ ++ N + YN M+ +Y + EK +V+E+
Sbjct: 369 SYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEM 428
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
+ + + P+ TY+ IS +D+ ++ SG D V Y ++ Y
Sbjct: 429 QSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRS-SGVEIDQVLYQTMIVAY 482
>gi|62320586|dbj|BAD95223.1| hypothetical protein [Arabidopsis thaliana]
Length = 778
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 104/286 (36%), Gaps = 56/286 (19%)
Query: 109 EISEWMVTH--KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHL 166
E+SE V K+ + + D + L+ KVF A S YT L+
Sbjct: 379 EVSEEGVVDVFKKLLPNSVDPSGEPPLLPKVF---------------APDSRIYTTLMKG 423
Query: 167 Y---AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNV 223
Y T + E R N + + Y +++ +++ G +++ V+ E+ R V
Sbjct: 424 YMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGV 483
Query: 224 VPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAE 283
+ TYN+ + L ID+ + L EM+ D+G D V Y NI I L++
Sbjct: 484 PANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSY----NIIIDGCILIDDS 539
Query: 284 SSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSS 343
+ L + +R T +Y ++ +
Sbjct: 540 AGALA--------------------------------FFNEMRTRGIAPTKISYTTLMKA 567
Query: 344 YLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
+ M G K + D+ D+ A N L+ + +GL E A
Sbjct: 568 FAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDA 613
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 84/202 (41%), Gaps = 8/202 (3%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTH--KEFVLSDSDYAT 129
A +++R +G+ V ++ L R A + E MV K V++ + T
Sbjct: 274 AFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQN---T 330
Query: 130 RIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSN 187
I + K I + + S ++ + TY L+H + A TE+A EL +
Sbjct: 331 LIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARG 390
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 247
L+ N + Y +++ ++ + V ++K P++FTY I + +D
Sbjct: 391 LAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGL 450
Query: 248 KFLDEMSCDSGGSDDWVKYVNL 269
K EM C +G S D V Y L
Sbjct: 451 KLFGEMVC-AGISPDHVVYGTL 471
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 137/341 (40%), Gaps = 55/341 (16%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWM---------VTHKEFVL 122
A ++I++ + +G+ V ++ L KS R + AL + M +H +L
Sbjct: 99 ACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIIL 158
Query: 123 SDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFER 182
++ID +VF H E +P S +Y L+ A A +A +LF R
Sbjct: 159 GLCQQ-SKIDQACQVF--H--EMEARDIP---PDSWSYGILIDGLAKAGKLNEAYKLFRR 210
Query: 183 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 242
+ S ++ +A+ YN ++ +++ + + ++ K P FT+N+ I +
Sbjct: 211 MLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGK 270
Query: 243 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 302
+D+ + L M+ D G D V Y L++ + + + +A L+E + +RQ
Sbjct: 271 MDEAFRLLKRMT-DDGHVPDVVTYSTLISGLCSIARVDDARH--LLE---DMVKRQ---- 320
Query: 303 DFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ 362
K + ++N ++ G +KE E++D
Sbjct: 321 -------------------------CKPTVVTQNT--LIHGLCKAGRIKEAREVLDAMVS 353
Query: 363 SATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
S S D+ N L+ G TE+A E ++ + AP
Sbjct: 354 SGQSP-DVVTYNTLVHGHCRAGQTERARELLSDMVARGLAP 393
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 84/203 (41%), Gaps = 9/203 (4%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSET--YTALLHLYAGAKWTEKAEELFERVK 184
Y ID + K ++ F+ L S T T YT+L+H A + A ELF +
Sbjct: 13 YGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMN 72
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
+ + + YN ++ G +E+ +++++ VPD+ TYN + + ++
Sbjct: 73 RRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVE 132
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE-KSITQRQWITYD 303
+ +EM + G + N + + + ++ E E + I W +Y
Sbjct: 133 EALLLFNEM--ERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSW-SYG 189
Query: 304 FLIILYAGLGNKDKIDQIWKSLR 326
LI GL K+++ +K R
Sbjct: 190 ILI---DGLAKAGKLNEAYKLFR 209
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/246 (18%), Positives = 97/246 (39%), Gaps = 3/246 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY ++ E+A +L +++ + + + YN +M G+VE+ L+ E+
Sbjct: 82 TYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEM 141
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+R P+ ++N I IDQ + EM D W Y L++ A
Sbjct: 142 ERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSW-SYGILIDGLAKAGK 200
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L A + IT +TY+ +I D+ +++KS+R + + +
Sbjct: 201 LNEAYKLFRRMLDSGITP-SAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFN 259
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
++ ++ G + E ++ + D+ + L+ + + A +++
Sbjct: 260 ILIDAHCKRGKMDEAFRLLKRMTDDGHVP-DVVTYSTLISGLCSIARVDDARHLLEDMVK 318
Query: 399 KNCAPT 404
+ C PT
Sbjct: 319 RQCKPT 324
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 46/246 (18%), Positives = 98/246 (39%), Gaps = 12/246 (4%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 184
Y ID + K ++ + F + S T TY ++H A ++A ELF+ ++
Sbjct: 188 YGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMR 247
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
+ +N ++ + G++++ +++ + VPD+ TY+ IS + +D
Sbjct: 248 SKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVD 307
Query: 245 QVKKFLDEM---SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQ-WI 300
+ L++M C V L++ A + E+ +++A S Q +
Sbjct: 308 DARHLLEDMVKRQCKP----TVVTQNTLIHGLCKAGRI--KEAREVLDAMVSSGQSPDVV 361
Query: 301 TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW 360
TY+ L+ + G ++ ++ + Y ++S L E + Q
Sbjct: 362 TYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQM 421
Query: 361 KQSATS 366
K S +
Sbjct: 422 KSSGCA 427
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/316 (19%), Positives = 124/316 (39%), Gaps = 73/316 (23%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT ++ A ++A+ELF ++ + S N + YN ++ +E+ ++EE+
Sbjct: 47 TYTIIVDRLCRAGKVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEM 106
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN-IY---- 273
K PD TYN +S + + K+F D M G S D V Y L++ +Y
Sbjct: 107 ASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMP-SRGYSPDVVAYNGLLDALYKEGK 165
Query: 274 ----------------------ITASHLVNA-----ESSTLVEAEKSITQRQW----ITY 302
IT + L++ ++ ++ K + + + +TY
Sbjct: 166 VAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTY 225
Query: 303 DFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ 362
+ +++ A N D+ ++++K + + Y +LS + +G++ E+ ++ +
Sbjct: 226 NSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTE 285
Query: 363 SATSDFDISACNRL----------------------LGAFSDV-------------GLTE 387
S D+ CN + +GA DV L +
Sbjct: 286 KRFSP-DVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVD 344
Query: 388 KANEFHMLLLQKNCAP 403
KA+E ++ CAP
Sbjct: 345 KAHELFSTMVDNGCAP 360
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 56/118 (47%), Gaps = 1/118 (0%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
A TY+ +L + + EL+E + + S + L+ N ++ + +V+
Sbjct: 254 APNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHK 313
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
V+EE+ + VPD+ TYN+ + T +D+ + M D+G + D V Y ++N
Sbjct: 314 VLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMV-DNGCAPDIVSYSVVLN 370
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/185 (20%), Positives = 72/185 (38%), Gaps = 3/185 (1%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
A + ++ V G + +L + LE+ E M T K F I
Sbjct: 241 AEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEM-TEKRFSPDVLLCNAVI 299
Query: 132 DLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLS 189
D++ K + + E + + TY LL +KA ELF + + +
Sbjct: 300 DMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCA 359
Query: 190 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 249
+ + Y+ ++ +V ++ + + + +VPD+ T+N+ + +D+ K
Sbjct: 360 PDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDL 419
Query: 250 LDEMS 254
LD MS
Sbjct: 420 LDVMS 424
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 92/221 (41%), Gaps = 17/221 (7%)
Query: 191 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 250
+ + Y+ +++ G+V + +VEE+ K V PD+ TY + + +D+ +
Sbjct: 9 DVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELF 68
Query: 251 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYA 310
+M + G S + V Y L+N ++ A L E + ITY+ ++
Sbjct: 69 HKM-IERGCSANTVAYNALINGLCKDENIERA-YKLLEEMASKGYEPDNITYNTILSGLC 126
Query: 311 GLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY-LMLGHLKEVGEIIDQWKQSATSDF- 368
+G + Q + S M SR Y + +Y +L L + G++ + W T D
Sbjct: 127 RMGKVSEAKQFFDS-------MPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMA 179
Query: 369 ------DISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
D+ N L+ F V T++A + ++ K P
Sbjct: 180 DRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMP 220
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T T L+H K T++A LF+ + + + L +N ++ G++ + L + +
Sbjct: 434 TCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSM 493
Query: 219 KRKN--VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
+ + PD+ TY +++ +DQ + +M+ SG + D+V Y L+N
Sbjct: 494 VKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMT-GSGCAPDYVAYNTLMN 547
>gi|255540881|ref|XP_002511505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550620|gb|EEF52107.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 876
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 93/198 (46%), Gaps = 10/198 (5%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+ ++A A + + A E+++R++ + LS + Y+ ++ G + + E+
Sbjct: 452 TYCTLIDIHAKAGFLDFALEMYQRMQAAGLSPDTFTYSVIINCLGKAGHLAAAHKLFCEM 511
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ VP++ TYN+ I+ A N K +M +G D V Y ++ + +
Sbjct: 512 VEQGCVPNLVTYNIMIALQAKARNYQSALKLYRDMQ-SAGFQPDKVTYSIVMEVLGHCGY 570
Query: 279 LVNAESSTLVEAEKSITQRQWIT----YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 334
L AE+ V +E + ++ W+ Y L+ L+ GN +K Q ++++ T +
Sbjct: 571 LDEAEA---VFSE--MKRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQTMLNTGLRPNV 625
Query: 335 RNYICILSSYLMLGHLKE 352
+LS++L + L +
Sbjct: 626 PTCNSLLSAFLRVHKLAD 643
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 57/299 (19%), Positives = 118/299 (39%), Gaps = 26/299 (8%)
Query: 93 HILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPL 152
+LK+L Q + AL W+ F Y T + ++ + + + + +
Sbjct: 352 QVLKQL---QDHTVALNFFYWLKRQPGFNHDGHTYTTMVGILGRAKQFGAINKLLDQMVK 408
Query: 153 SAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 210
TY L+H Y A + A ++F +++ + + Y ++ ++ G ++
Sbjct: 409 DGCQPNVVTYNRLIHSYGRANYLNDAVDVFNEMQRVGCEPDRVTYCTLIDIHAKAGFLDF 468
Query: 211 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 270
+ + ++ + PD FTY++ I+ ++ K EM + G + V Y
Sbjct: 469 ALEMYQRMQAAGLSPDTFTYSVIINCLGKAGHLAAAHKLFCEM-VEQGCVPNLVTY---- 523
Query: 271 NIYITASHLVNAESSTLV---EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 327
NI I S L + + + Q +TY ++ + G D+ + ++
Sbjct: 524 NIMIALQAKARNYQSALKLYRDMQSAGFQPDKVTYSIVMEVLGHCGYLDEAEAVFS---- 579
Query: 328 TKQKMTSRNYICILSSYLMLGHL-KEVGEIID--QWKQSATSD---FDISACNRLLGAF 380
+M +N++ Y +L L + G + QW Q+ + ++ CN LL AF
Sbjct: 580 ---EMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQTMLNTGLRPNVPTCNSLLSAF 635
>gi|255574572|ref|XP_002528197.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532409|gb|EEF34204.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 642
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 107/249 (42%), Gaps = 5/249 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY+AL+ + + A LF+ +K++ L A +Y ++ +Y + +VEK V++E+
Sbjct: 236 TYSALISAFGKLGHYDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVEKALDVIKEM 295
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K K +FTY WI +D + +M D G D V +L+NI
Sbjct: 296 KDKGCTLTVFTYTEWIKGLGKAGRVDDAYRVFLDMIKD-GCKPDVVLINSLINILGKVGR 354
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLI-ILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
L + E + +TY+ +I L+ + ++ ++ +S Y
Sbjct: 355 L-EVTLKLFRKMESWQCKPNVVTYNTVIKALFECKAPASEAASWFEKMKGCGIAPSSFTY 413
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 397
++ + +++ ++++ + + C+ L+ + V E ANE L L
Sbjct: 414 SILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCS-LINSLGKVKRYEAANEL-FLEL 471
Query: 398 QKNCAPTNA 406
++NC ++A
Sbjct: 472 KENCGHSSA 480
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 77/167 (46%), Gaps = 7/167 (4%)
Query: 148 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 207
+G P Y +L++ K E A ELF +K++ +A +Y M+ + G+
Sbjct: 439 KGFP---PCPAAYCSLINSLGKVKRYEAANELFLELKENCGHSSARVYAVMIKHFGKCGR 495
Query: 208 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 267
+ + + E+++ PD++ YN +S ID+ + L M ++G S D +
Sbjct: 496 LSEAVDLFNEMEKLGSKPDVYAYNALMSGMVRAGMIDEAQSLLRTMD-ENGCSPDLNSH- 553
Query: 268 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI--ILYAGL 312
N++ + + + + + + SI + ++Y+ ++ + +AGL
Sbjct: 554 NIILNGLARTGVPDRAIEMFAKMKSSIIKPDAVSYNTVLGCLSHAGL 600
>gi|440793601|gb|ELR14780.1| PPR repeat/pentatricopeptide repeat domain containing protein,
partial [Acanthamoeba castellanii str. Neff]
Length = 610
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 98/239 (41%), Gaps = 3/239 (1%)
Query: 161 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 220
+AL+ L + T+ A +L R+ Q + + +++ G+V K EI+R
Sbjct: 87 SALIALLGKLQRTDAALDLVTRMTQQGYVPDVFVLTALVSALGRAGEVGKAQYFFNEIQR 146
Query: 221 KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLV 280
+ P + +YN I + A ID+V+ L+ M G D Y ++N A +
Sbjct: 147 LGMTPTLHSYNSMIMAFARAGRIDKVRDMLEVMK-HKGIEPDVRTYTEIINNSCKAGRVA 205
Query: 281 NAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICI 340
A T +E + Q Y LI ++ +G+ K Q+ + + + + Y +
Sbjct: 206 EA-YQTFIEMQDVGVQPDLKVYSALIAGFSHVGDHLKAQQLKEEMEALGLEASMITYSGM 264
Query: 341 LSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 399
LS L E+ +I+ K+ + A L+ SD ++A L+QK
Sbjct: 265 LSGLARNRQLTEMERVIEAMKKRNMVP-NARALGDLINRMSDTMPMDQAFNMAQALVQK 322
>gi|357509703|ref|XP_003625140.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500155|gb|AES81358.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 855
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 111/272 (40%), Gaps = 11/272 (4%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDS-DYATRIDLMTKVFGIHSGERYF----- 147
I+ L K ++Y A++I M K D + + I L + I + E F
Sbjct: 296 IIHCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNMMLA 355
Query: 148 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 207
EGL +Y ALL YA +A ++F +KQ+ + + Y ++ Y +
Sbjct: 356 EGL---KPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRK 412
Query: 208 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 267
+K + + IKR N+ P+I +YN I + + ++ + L EM D + V
Sbjct: 413 PQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDK-IHPNVVSIC 471
Query: 268 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 327
L+ V + + L AE + + Y+ I Y +G DK ++ S+R
Sbjct: 472 TLLAACGRCGQKVKID-TVLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRK 530
Query: 328 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 359
K K S Y ++S + E +++
Sbjct: 531 KKIKSDSVTYTVLISGCCKMSKFGEALSFMEE 562
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 95/224 (42%), Gaps = 8/224 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+T+++HLY+ E E F + L N + YN ++ Y + G + V EI
Sbjct: 329 TFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEI 388
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K+ PD+ +Y +++ + + ++ +M + + V Y L++ Y ++
Sbjct: 389 KQNGFRPDVVSYTSLLNAYGRSRKPQKAREIF-KMIKRNNLKPNIVSYNALIDAY-GSNG 446
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L+ L E E+ ++ L+ G K KID + + M K+ + Y
Sbjct: 447 LLEDAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKIDTVLSAAEMRGIKLNTVAYN 506
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQ------SATSDFDISACNRL 376
+ SY+ +G + ++ + ++ S T IS C ++
Sbjct: 507 SAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCCKM 550
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 106/238 (44%), Gaps = 11/238 (4%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
++ Y ++ L+A T++A LF +++ +A YN ++ + GQ +++
Sbjct: 150 TDIYNMMIRLHARHNRTDQARGLFFEMQKCRCKPDAETYNALINAHGRAGQWRWAMNIMD 209
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
++ R + P TYN I++C ++ N + +M+ D+G D V + NI +TA
Sbjct: 210 DMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMT-DNGVGPDLVTH----NIMLTA 264
Query: 277 --SHLVNAESSTLVEAEKSITQRQ-WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
S +++ + E K R T++ +I L DK I+ S++ K +
Sbjct: 265 FKSGTQYSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSECH 324
Query: 334 SR--NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
+ ++ Y + GH++ + +I + N LLGA++ G+ +A
Sbjct: 325 PDVVTFTSMIHLYSVCGHIENCEAAFNMMLAEGLKP-NIVSYNALLGAYAARGMENEA 381
>gi|302764530|ref|XP_002965686.1| hypothetical protein SELMODRAFT_407278 [Selaginella moellendorffii]
gi|300166500|gb|EFJ33106.1| hypothetical protein SELMODRAFT_407278 [Selaginella moellendorffii]
Length = 1015
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 61/336 (18%), Positives = 139/336 (41%), Gaps = 40/336 (11%)
Query: 56 DDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMV 115
DD +++ + K +++W+ GN + L I L K +RY +++ E +
Sbjct: 70 DDKITKVLEMIESKPDTFEAVKKWMRRGNCLSSDVLSTIYFWLMKRKRYTEIMKLLEGIR 129
Query: 116 THKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEK 175
+ +D I ++++ G+ ER+++ LP +T L A K
Sbjct: 130 CERLVKFTDMHCVWAIGVISRRRGMAKAERFYDSLPEKLRTDRVTVGLFLSVAKENGLAK 189
Query: 176 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
AE+ E+++ + + MM LY++ + KV + E ++ + P + TY L +
Sbjct: 190 AEQWLEKIQVHTTD----ILDVMMVLYLNRDKHHKVVEMFERMRGLGLQPSVRTY-LMLL 244
Query: 236 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 295
C D+ L+ + ++ G A ++ E S +
Sbjct: 245 KCK-----DRGAGGLNAIEGEALG----------------AVQTIDVEDSPVR------- 276
Query: 296 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 355
T + + +Y +G + I+++W+SL+ T+ + +Y +++ ++G + +
Sbjct: 277 -----TLNDAMEVYGYVGKQHGIEELWRSLKRTRSDIHQSSYFSAITALGLVGEVAKARA 331
Query: 356 IIDQWKQSAT--SDFDISACNRLLGAFSDVGLTEKA 389
+ + + + F+ + +L ++ G+ EKA
Sbjct: 332 LCKELLAGSDEFTKFEQNPHALMLEVYARNGMMEKA 367
>gi|224086334|ref|XP_002307852.1| predicted protein [Populus trichocarpa]
gi|222853828|gb|EEE91375.1| predicted protein [Populus trichocarpa]
Length = 670
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 90/212 (42%), Gaps = 15/212 (7%)
Query: 66 SLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDS 125
+LP + + + G +L K++ + A E+ +M+ K ++
Sbjct: 443 ALPVGELSRLFNEMLQRGFDPNTITFNVMLDVYAKAKLFNKAREL--FMMARKRGLVDVI 500
Query: 126 DYATRI-------DLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEE 178
Y T I D IH+ + F+G +S E Y +L Y E
Sbjct: 501 SYNTIIAAYGRKRDFKNMASTIHTMQ--FDGFSVSL---EAYNCVLDAYGKEGQMESFRS 555
Query: 179 LFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCA 238
+ +R+K S+ + + YN MM +Y +G +++VA V+ E++ + PD+ +YN I +
Sbjct: 556 VLQRMKNSSCTADHYTYNIMMNIYGELGWIDEVAGVLTELRECGLGPDLCSYNTLIKAYG 615
Query: 239 ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 270
++ + EM +G D + Y NL+
Sbjct: 616 IAGMVEDAVGLVKEMR-QNGVEPDKITYTNLI 646
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/260 (18%), Positives = 118/260 (45%), Gaps = 7/260 (2%)
Query: 128 ATRIDLMTKVFGIHSGERYFEGLPLSAKTSET--YTALLHLYAGAKWTEKAEELFERV-K 184
T ID+ T + + GE+ + L S + ++ ++ +Y A + A + E + K
Sbjct: 328 CTMIDIYTTMGQFNEGEKLYMKLKSSGIGLDVIAFSIVIRMYVKAGSLKDACSVLETMEK 387
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
+ ++ + ++ +M+ +Y G ++K+ + +I + VV D YN I+ CA L +
Sbjct: 388 EKDMVPDIYLFRDMLRVYQQCGMMDKLNDLYFKILKSGVVWDQELYNCLINCCARALPVG 447
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 304
++ + +EM G + + + ++++Y A A ++ ++ + I+Y+
Sbjct: 448 ELSRLFNEM-LQRGFDPNTITFNVMLDVYAKAKLFNKARELFMMARKRGLVDV--ISYNT 504
Query: 305 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
+I Y + + +++ ++ Y C+L +Y G ++ ++ + K S+
Sbjct: 505 IIAAYGRKRDFKNMASTIHTMQFDGFSVSLEAYNCVLDAYGKEGQMESFRSVLQRMKNSS 564
Query: 365 TSDFDISACNRLLGAFSDVG 384
+ D N ++ + ++G
Sbjct: 565 CTA-DHYTYNIMMNIYGELG 583
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 39/78 (50%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY ++++Y W ++ + +++ L + YN ++ Y G VE +V+E+
Sbjct: 571 TYNIMMNIYGELGWIDEVAGVLTELRECGLGPDLCSYNTLIKAYGIAGMVEDAVGLVKEM 630
Query: 219 KRKNVVPDIFTYNLWISS 236
++ V PD TY I++
Sbjct: 631 RQNGVEPDKITYTNLITT 648
>gi|115489794|ref|NP_001067384.1| Os12g0638900 [Oryza sativa Japonica Group]
gi|77556813|gb|ABA99609.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113649891|dbj|BAF30403.1| Os12g0638900 [Oryza sativa Japonica Group]
gi|125580213|gb|EAZ21359.1| hypothetical protein OsJ_37016 [Oryza sativa Japonica Group]
Length = 859
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 70/349 (20%), Positives = 127/349 (36%), Gaps = 41/349 (11%)
Query: 95 LKELRKSQRYKHALEISEW--MVTHKEFVLSDSDYATRIDLMTKVFGIHS-GERYFEGL- 150
LK LR ++Y H L+ +W M H L A + + + K+ H+ +F+ L
Sbjct: 298 LKSLRSVEQYYHTLQQMKWGPMTEHVLDNLHCKIDAFQANQVLKLLHDHTIALGFFQWLK 357
Query: 151 --PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 208
P +YT ++ + A+ +L + + + + YN ++ Y +
Sbjct: 358 RQPGFKHDGHSYTTMIGILGQARQFGTMRKLLDEMNSVHCKPTVVTYNRIIHAYGRANYL 417
Query: 209 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268
+ V EE+++ PD TY I A ++ M + G S D Y
Sbjct: 418 REAVKVFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEFAMDLYTRMQ-EVGLSPDTFTYSA 476
Query: 269 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 328
+VN HL A E T +TY+ +I L A N + + +++K +++
Sbjct: 477 MVNCLGKGGHLAAAYKLFCEMVENGCTP-NLVTYNIMIALQAKARNYENVVKLYKDMQVA 535
Query: 329 KQKMTSRNYICILSSYLMLGHLKEV------------------GEIIDQWKQSATSD--- 367
+ Y ++ GHL E G ++D W ++ D
Sbjct: 536 GFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRHDWAPDEPVYGLLVDLWGKAGNVDKAL 595
Query: 368 ------------FDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 404
++ CN LL AF + + A +L + P+
Sbjct: 596 GWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQNMLAQGLVPS 644
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 103/237 (43%), Gaps = 7/237 (2%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE---TYTALLHLYAGAKWTEKAEELFERV 183
Y T I K+ + + ++F+ + LS K S TYT L+ + + + LF +
Sbjct: 366 YTTLIHGFFKLGHVRTANKWFDEM-LSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEM 424
Query: 184 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 243
L + + Y ++ +Y G++ + E+ + + P+I TY I +
Sbjct: 425 ISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGEL 484
Query: 244 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 303
D + LDEM G + Y ++VN A ++ A + E E + ITY
Sbjct: 485 DTANELLDEMR-KKGLQLNVCIYNSMVNGICKAGNIEQA-IKLMKEMEVAGIDPDAITYT 542
Query: 304 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW 360
+I Y LG+ DK ++ + + + T + +++ + MLG L++ G+ + W
Sbjct: 543 TVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLED-GDRLLGW 598
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 83/194 (42%), Gaps = 2/194 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY AL+ + A EL + +++ L N +YN M+ G +E+ +++E+
Sbjct: 470 TYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEM 529
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + PD TY I + +ID+ K L EM D G V + L+N +
Sbjct: 530 EVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEM-LDRGLQPTVVTFNVLMNGFCMLGM 588
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L + + EK I ITY+ L+ + + + +I+K +R S Y
Sbjct: 589 LEDGDRLLGWMLEKGIVP-DAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYN 647
Query: 339 CILSSYLMLGHLKE 352
++ + +LKE
Sbjct: 648 ILIKGHCKARNLKE 661
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 54/280 (19%), Positives = 110/280 (39%), Gaps = 36/280 (12%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y+ ++ Y +KA +L + ++ L N YN ++ L +G+ + V+ E+
Sbjct: 295 SYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREM 354
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM-----SCD----------------- 256
+ ++PD Y I ++ K+ DEM S D
Sbjct: 355 MSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKV 414
Query: 257 ------------SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 304
G D V Y L+++Y A +VNA S + +T +TY
Sbjct: 415 IEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTP-NIVTYGA 473
Query: 305 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
LI G D +++ +R ++ Y +++ G++++ +++ + + A
Sbjct: 474 LIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEM-EVA 532
Query: 365 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 404
D D ++ A+ +G +KA++ +L + PT
Sbjct: 533 GIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPT 572
>gi|18417671|ref|NP_567856.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635625|sp|O65567.2|PP342_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30825, chloroplastic; Flags: Precursor
gi|332660415|gb|AEE85815.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 904
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 4/124 (3%)
Query: 147 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 206
F+G +S E Y LL Y K EK + +R+K+S + YN M+ +Y G
Sbjct: 761 FDGFSVSL---EAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQG 817
Query: 207 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 266
+++VA V++E+K + PD+ +YN I + +++ + EM + D V Y
Sbjct: 818 WIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDK-VTY 876
Query: 267 VNLV 270
NLV
Sbjct: 877 TNLV 880
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/241 (19%), Positives = 99/241 (41%), Gaps = 4/241 (1%)
Query: 163 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 222
+L +Y +K + L+ R+++S + +N MYN ++ +++++ EE+ R
Sbjct: 635 MLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYG 694
Query: 223 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 282
P+ T+N+ + +V + + G D + Y ++ Y N
Sbjct: 695 FTPNTVTFNVLLDVYGKAKLFKKVNELF--LLAKRHGVVDVISYNTIIAAYGKNKDYTNM 752
Query: 283 ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILS 342
SS + + Y+ L+ Y +K I K ++ + Y +++
Sbjct: 753 -SSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMIN 811
Query: 343 SYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCA 402
Y G + EV +++ + K+S D+ + N L+ A+ G+ E+A + +N
Sbjct: 812 IYGEQGWIDEVADVLKELKESGLGP-DLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNII 870
Query: 403 P 403
P
Sbjct: 871 P 871
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 60/149 (40%), Gaps = 35/149 (23%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSN----LSFNALM-------------------- 194
T+ LL +Y AK +K ELF K+ +S+N ++
Sbjct: 701 TFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQ 760
Query: 195 ----------YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
YN ++ Y Q+EK +++ +K+ PD +TYN+ I+ ID
Sbjct: 761 FDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWID 820
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
+V L E+ +SG D Y L+ Y
Sbjct: 821 EVADVLKELK-ESGLGPDLCSYNTLIKAY 848
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 8/203 (3%)
Query: 168 AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 227
G +KA +L + + + + Y++++T +VEK L+ +E+K V PD+
Sbjct: 264 CGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDV 323
Query: 228 FTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES-- 284
+TY + I S C A L I+Q + +EM G S V Y L++ Y+ A + A
Sbjct: 324 YTYTILIDSFCKAGL-IEQAQWLFEEMR-SVGCSPTVVTYTALIHAYLKAKQVPQANDIF 381
Query: 285 STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY 344
+V+A + +TY L+ GN K +++ L T S Y +
Sbjct: 382 HRMVDAG---CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRH 438
Query: 345 LMLGHLKEVGEIIDQWKQSATSD 367
+ ++ G ++D ++ D
Sbjct: 439 TLAPNVVTYGALVDGLCKAHKVD 461
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 128/321 (39%), Gaps = 26/321 (8%)
Query: 103 RYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TY 160
++ A ++ + M+ K FV S Y+ I + + F+ + + T + TY
Sbjct: 268 KFDKAFQLIKEMM-RKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTY 326
Query: 161 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 220
T L+ + A E+A+ LFE ++ S + Y ++ Y+ QV + + +
Sbjct: 327 TILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVD 386
Query: 221 KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM--SCDSGGSDDW-------------VK 265
P+ TY + NI + + ++ + DS SD + V
Sbjct: 387 AGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVT 446
Query: 266 YVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 325
Y LV+ + +H V+ L S + I YD LI + G D +++ L
Sbjct: 447 YGALVD-GLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF--L 503
Query: 326 RMTKQKM--TSRNYICILSSYLMLGHLKEVGEIIDQW-KQSATSDFDISACNRLLGAFSD 382
+MTK + Y ++ G L +++ Q K S T ++ ++
Sbjct: 504 QMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTP--NVVTYTAMIDGLCR 561
Query: 383 VGLTEKANEFHMLLLQKNCAP 403
+G +EKA + L+ +K C+P
Sbjct: 562 IGESEKALKLLSLMEEKGCSP 582
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYTA++ +EKA +L +++ S N + Y ++ G+++ + ++
Sbjct: 551 TYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQM 610
Query: 219 KRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268
RK P+ TY + I+ CAA L +D+ + L EM W KY+
Sbjct: 611 SRKGCSPNYVTYRVLINHLCAAGL-LDKARLLLGEMK-----QTYWPKYLQ 655
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 103/237 (43%), Gaps = 7/237 (2%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE---TYTALLHLYAGAKWTEKAEELFERV 183
Y T I K+ + + ++F+ + LS K S TYT L+ + + + LF +
Sbjct: 366 YTTLIHGFFKLGHVRTANKWFDEM-LSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEM 424
Query: 184 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 243
L + + Y ++ +Y G++ + E+ + + P+I TY I +
Sbjct: 425 ISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGEL 484
Query: 244 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 303
D + LDEM G + Y ++VN A ++ A + E E + ITY
Sbjct: 485 DTANELLDEMR-KKGLQLNVCIYNSMVNGICKAGNIEQA-IKLMKEMEVAGIDPDAITYT 542
Query: 304 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW 360
+I Y LG+ DK ++ + + + T + +++ + MLG L++ G+ + W
Sbjct: 543 TVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLED-GDRLLGW 598
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 83/194 (42%), Gaps = 2/194 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY AL+ + A EL + +++ L N +YN M+ G +E+ +++E+
Sbjct: 470 TYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEM 529
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + PD TY I + +ID+ K L EM D G V + L+N +
Sbjct: 530 EVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEM-LDRGLQPTVVTFNVLMNGFCMLGM 588
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L + + EK I ITY+ L+ + + + +I+K +R S Y
Sbjct: 589 LEDGDRLLGWMLEKGIVP-DAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYN 647
Query: 339 CILSSYLMLGHLKE 352
++ + +LKE
Sbjct: 648 ILIKGHCKARNLKE 661
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 54/280 (19%), Positives = 110/280 (39%), Gaps = 36/280 (12%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y+ ++ Y +KA +L + ++ L N YN ++ L +G+ + V+ E+
Sbjct: 295 SYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREM 354
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM-----SCD----------------- 256
+ ++PD Y I ++ K+ DEM S D
Sbjct: 355 MSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKV 414
Query: 257 ------------SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 304
G D V Y L+++Y A +VNA S + +T +TY
Sbjct: 415 IEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTP-NIVTYGA 473
Query: 305 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
LI G D +++ +R ++ Y +++ G++++ +++ + + A
Sbjct: 474 LIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEM-EVA 532
Query: 365 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 404
D D ++ A+ +G +KA++ +L + PT
Sbjct: 533 GIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPT 572
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 84/202 (41%), Gaps = 8/202 (3%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTH--KEFVLSDSDYAT 129
A +++R +G+ V ++ L R A + E MV K V++ + T
Sbjct: 274 AFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQN---T 330
Query: 130 RIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSN 187
I + K I + + S ++ + TY L+H + A TE+A EL +
Sbjct: 331 LIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARG 390
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 247
L+ N + Y +++ ++ + V ++K P++FTY I + +D
Sbjct: 391 LAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGL 450
Query: 248 KFLDEMSCDSGGSDDWVKYVNL 269
K EM C +G S D V Y L
Sbjct: 451 KLFGEMVC-AGISPDHVVYGTL 471
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 139/341 (40%), Gaps = 55/341 (16%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWM---------VTHKEFVL 122
A ++I++ + +G+ V ++ L KS R + AL + M +H +L
Sbjct: 99 ACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIIL 158
Query: 123 SDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFER 182
++ID +VF H E + +P S +Y L+ A A +A +LF+R
Sbjct: 159 GLCQQ-SKIDQACQVF--H--EMEAKDIP---PDSWSYGILIDGLAKAGKLNEAYKLFQR 210
Query: 183 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 242
+ S ++ +A+ YN ++ +++ + + ++ K P FT+N+ I +
Sbjct: 211 MLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGK 270
Query: 243 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 302
+D+ + L M+ D G D V Y L++ + + + +A L+E + +RQ
Sbjct: 271 LDEAFRLLKRMT-DDGHVPDVVTYSTLISGLCSIARVDDARH--LLE---DMVKRQ---- 320
Query: 303 DFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ 362
K + ++N ++ G +KE E++D
Sbjct: 321 -------------------------CKPTVVTQNT--LIHGLCKAGRIKEAREVLDAMVS 353
Query: 363 SATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
S S D+ N L+ G TE+A E ++ + AP
Sbjct: 354 SGQSP-DVVTYNTLVHGHCRAGQTERARELLSDMVARGLAP 393
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 83/200 (41%), Gaps = 9/200 (4%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSET--YTALLHLYAGAKWTEKAEELFERVK 184
Y ID + K ++ F+ L S T T YT+L+H A + A ELF +
Sbjct: 13 YGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMN 72
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
+ + + YN M+ G +E+ +++++ VPD+ TYN + + ++
Sbjct: 73 RRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVE 132
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE-KSITQRQWITYD 303
+ +EM + G + N + + + ++ E E K I W +Y
Sbjct: 133 EALLLFNEM--ERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSW-SYG 189
Query: 304 FLIILYAGLGNKDKIDQIWK 323
LI GL K+++ +K
Sbjct: 190 ILI---DGLAKAGKLNEAYK 206
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/246 (18%), Positives = 99/246 (40%), Gaps = 12/246 (4%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 184
Y ID + K ++ + F+ + S T TY ++H A ++A ELF+ ++
Sbjct: 188 YGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMR 247
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
+ +N ++ + G++++ +++ + VPD+ TY+ IS + +D
Sbjct: 248 SKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVD 307
Query: 245 QVKKFLDEM---SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQ-WI 300
+ L++M C V L++ A + E+ +++A S Q +
Sbjct: 308 DARHLLEDMVKRQCKP----TVVTQNTLIHGLCKAGRI--KEAREVLDAMVSSGQSPDVV 361
Query: 301 TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW 360
TY+ L+ + G ++ ++ + Y ++S L E + Q
Sbjct: 362 TYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQM 421
Query: 361 KQSATS 366
K S +
Sbjct: 422 KSSGCA 427
>gi|21537126|gb|AAM61467.1| unknown [Arabidopsis thaliana]
Length = 766
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 75/370 (20%), Positives = 148/370 (40%), Gaps = 51/370 (13%)
Query: 85 QATVSELRHILKELRKSQRYKHALEISEWMVTHK----EFVLSDS-DYATRIDLMTKVFG 139
+ V L ++ L KS+R ALE+ E M + + +DS + T ID + KV
Sbjct: 326 RPDVVTLGILINTLSKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGR 385
Query: 140 IHSGERYFEGLPLSAK---TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYN 196
+ E + L + + TY L+ Y A E A+E+ R+K+ + N + N
Sbjct: 386 LKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAVKLETAKEVVSRMKEDEIKPNVVTVN 445
Query: 197 EMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM--- 253
++ + + +++++ V ++ TY I +C + N+++ + ++M
Sbjct: 446 TIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEA 505
Query: 254 SC-------------------------------DSGGSDDWVKYVNLVNIYITASHLVNA 282
C + G S D + Y L+ ++ + NA
Sbjct: 506 GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKN---NA 562
Query: 283 ES--STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICI 340
E L + EK + ITY+ LI + + + ++++ + +R T Y +
Sbjct: 563 EKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAV 622
Query: 341 LSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA----NEFHMLL 396
+ +Y +G L E ++ + + + N L+ AFS +G +A E M +
Sbjct: 623 IDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKM 682
Query: 397 LQKNCAPTNA 406
++ N NA
Sbjct: 683 VRPNVETYNA 692
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 149/341 (43%), Gaps = 34/341 (9%)
Query: 63 FRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMV--THKEF 120
F++SL A +++ + + G + + ++ + R A+ + + MV +K
Sbjct: 237 FQVSL----ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPD 292
Query: 121 VLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLH-LYAGAKWTEKAE 177
+++ Y ID + K ++ +F+ + TYTAL++ L ++W++ A
Sbjct: 293 IVA---YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 349
Query: 178 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 237
L + +K+ ++ N + Y+ ++ ++ G+V + + EE+ R ++ PDI TY+ I+
Sbjct: 350 LLSDMIKK-KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 408
Query: 238 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 297
ID+ + D M G D V Y L+N + A + + ++ + ++QR
Sbjct: 409 CLHDRIDEANQMFDLM-VSKGCLADVVSYNTLINGFCKAKRVEDG-----MKLFREMSQR 462
Query: 298 QW----ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 353
+TY+ LI + G+ DK + + + I + ++LG L +
Sbjct: 463 GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPD------IWTYNILLGGLCDN 516
Query: 354 GE-----IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
GE +I + Q D DI ++ G E+A
Sbjct: 517 GELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEA 557
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 9/130 (6%)
Query: 119 EFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--------TYTALLHLYAGA 170
EF++S + + T + G +R EG+ + + S+ TY L+ A
Sbjct: 999 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 1058
Query: 171 KWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 230
+ A+E+F+ + + N + YN ++ G++EK +V E ++R + P I+TY
Sbjct: 1059 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 1118
Query: 231 NLWISS-CAA 239
N+ I C A
Sbjct: 1119 NIMIEGMCKA 1128
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 95/214 (44%), Gaps = 16/214 (7%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY++L++ + ++A+++FE + + + + YN ++ + +VE+ V E+
Sbjct: 977 TYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 1036
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
++ +V + TYN+ I + D ++ EM D G + + Y L++
Sbjct: 1037 SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD-GVPPNIMTYNTLLDGLCKNGK 1095
Query: 279 LVNAESSTLV--EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK-----SLRMTKQK 331
L E + +V ++S + TY+ +I G+ K++ W SL+ K
Sbjct: 1096 L---EKAMVVFEYLQRSKMEPTIYTYNIMI---EGMCKAGKVEDGWDLFCNLSLKGVKPD 1149
Query: 332 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 365
+ + N ++S + G +E + + K+ T
Sbjct: 1150 VVAYNT--MISGFCRKGSKEEADALFKEMKEDGT 1181
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 69/167 (41%), Gaps = 3/167 (1%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
A + VS+G A V ++ K++R + +++ M + + V + Y T I
Sbjct: 417 ANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM-SQRGLVSNTVTYNTLI 475
Query: 132 DLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLS 189
+ + + +F + + + TY LL EKA +FE +++ +
Sbjct: 476 QGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMD 535
Query: 190 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 236
+ + Y ++ G+VE+ + + K + PDI TY +S
Sbjct: 536 LDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSG 582
>gi|356536609|ref|XP_003536829.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Glycine max]
Length = 787
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 116/240 (48%), Gaps = 7/240 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y++L+H+ A A A+ ++++++ L + + Y +++ + +GQ E + +E+
Sbjct: 491 SYSSLIHILASADKPHLAKSYLKKMQEAGLVSDCVPYCVVISSFTKLGQFEMAEELYKEM 550
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
V PD+ Y ++I++ A ++ + +++EM +G + Y +L+ +Y +
Sbjct: 551 LGYAVQPDVIIYGVFINAFADAGSVKEAINYVNEMR-KAGLPGNPAIYNSLIKLYTKVGY 609
Query: 279 LVNA-ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
L A E+ L++ S + + +I LY ++ +I++SL M + +Y
Sbjct: 610 LKEAQETYKLIQL--SDEGPSLFSSNCMIDLYTERLMVEQAKEIFESL-MKNEVANEFSY 666
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFS-DVGLTEKANEFHMLL 396
+L Y +G L E +I Q ++ DI + N +LG +S D L E F ++
Sbjct: 667 AMMLCMYKKIGRLDEAIQIATQMRRLGFLT-DILSYNNVLGLYSMDRRLREATETFKEMI 725
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 1/128 (0%)
Query: 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215
+S TY L+ Y A E F R+ + + N + N M+ LY + G++ + L+
Sbjct: 245 SSHTYATLIDTYGKGGQFHAACETFARIIRQGRALNTVTLNTMIHLYGNCGRLRQACLLF 304
Query: 216 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275
+++ VPD +TYN+ IS + K+ M + D V Y L+ Y T
Sbjct: 305 QKMGEFRCVPDTWTYNILISLNIKNNKVKLAAKYFARMK-KAFLEPDVVSYRTLLYAYST 363
Query: 276 ASHLVNAE 283
+ AE
Sbjct: 364 RKMVREAE 371
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 66/148 (44%), Gaps = 2/148 (1%)
Query: 108 LEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYT--ALLH 165
L + + +V+H LS YAT ID K H+ F + + T T ++H
Sbjct: 230 LGVDDKVVSHTNVCLSSHTYATLIDTYGKGGQFHAACETFARIIRQGRALNTVTLNTMIH 289
Query: 166 LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVP 225
LY +A LF+++ + + YN +++L + +V+ A +K+ + P
Sbjct: 290 LYGNCGRLRQACLLFQKMGEFRCVPDTWTYNILISLNIKNNKVKLAAKYFARMKKAFLEP 349
Query: 226 DIFTYNLWISSCAATLNIDQVKKFLDEM 253
D+ +Y + + + + + ++ + EM
Sbjct: 350 DVVSYRTLLYAYSTRKMVREAEELIREM 377
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 73/150 (48%), Gaps = 4/150 (2%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTA--LLHLYAGAKWTEKAEELFERVK 184
Y + I L TKV + + ++ + LS + +++ ++ LY E+A+E+FE +
Sbjct: 597 YNSLIKLYTKVGYLKEAQETYKLIQLSDEGPSLFSSNCMIDLYTERLMVEQAKEIFESLM 656
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
++ ++ N Y M+ +Y +G++++ + +++R + DI +YN + + +
Sbjct: 657 KNEVA-NEFSYAMMLCMYKKIGRLDEAIQIATQMRRLGFLTDILSYNNVLGLYSMDRRLR 715
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274
+ + EM SG D + L NI +
Sbjct: 716 EATETFKEM-IKSGVQPDDFTFRALANILL 744
>gi|255661202|gb|ACU25770.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 426
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y LL +Y A+ +A LF +++ N+ N + YN MM +Y + EK +++E+
Sbjct: 186 SYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMVIYGKTLEHEKANNLIQEM 245
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + + P+ TY+ IS +D+ ++ C SG D V Y ++ Y A
Sbjct: 246 QDRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRC-SGIEIDQVLYQTMIVAYERAGL 304
Query: 279 LVNAE 283
+ +A+
Sbjct: 305 VAHAK 309
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 48/249 (19%), Positives = 103/249 (41%), Gaps = 11/249 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY+ L+ + + A +++++ + + ++Y+ ++ L + + + +
Sbjct: 11 TYSTLITHFGKEGLFDDALSWLQKMEEDRVPGDLVLYSNLIELSRKLCDYSRAISIFSRL 70
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
KR + PD+ YN I+ + + + EM +G D V Y L+ +Y+
Sbjct: 71 KRSGIAPDLVAYNSMINVFGKAKLFREARALVSEMRT-AGVMPDTVSYCTLLTMYVENQK 129
Query: 279 LVNAES--STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 336
+ A S S + E + S T + +I +Y LG + D+++ S+R + +
Sbjct: 130 FLEALSLFSEMREIQCSF---DLTTCNIMIDVYGQLGMAKEADKLFWSMRKMGIEPNVVS 186
Query: 337 YICILSSYLMLGHLKEVGEIIDQWK--QSATSDFDISACNRLLGAFSDVGLTEKANEFHM 394
Y +L Y G + GE I ++ Q + ++ N ++ + EKAN
Sbjct: 187 YNTLLRVY---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMVIYGKTLEHEKANNLIQ 243
Query: 395 LLLQKNCAP 403
+ + P
Sbjct: 244 EMQDRGIEP 252
>gi|413921612|gb|AFW61544.1| hypothetical protein ZEAMMB73_526638 [Zea mays]
Length = 456
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 99/215 (46%), Gaps = 15/215 (6%)
Query: 149 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 208
GLPLS T++A++ Y ++ ++A E+F R+ + +YN ++ + G
Sbjct: 139 GLPLS---PTTFSAVISSYGHSRLPDQAVEVFNRLPRFGCPQTTEVYNALLDALCANGNF 195
Query: 209 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268
++ + RK V PD T++ + S A + + + FLD+M+ G V+ +
Sbjct: 196 TGAYKLLRRMARKGVAPDRATFSTLVDSWCAAGKLQEAQAFLDDMA--GRGLRPPVRGRD 253
Query: 269 -LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 327
LV+ + A HL A++ L ++ I T++ L L N +D L
Sbjct: 254 LLVDGLVRAGHLEQAKAFALRMTKEGILP-DVATFN---SLAEALCNAGDVDFAVSLL-- 307
Query: 328 TKQKMTSRNYICILSSY-LMLGHLKEVGEIIDQWK 361
+SR +S+Y +ML + +VG+I + ++
Sbjct: 308 --ADASSRGLCPDISTYKVMLPAVAKVGKIEEAFR 340
>gi|302761606|ref|XP_002964225.1| hypothetical protein SELMODRAFT_81759 [Selaginella moellendorffii]
gi|300167954|gb|EFJ34558.1| hypothetical protein SELMODRAFT_81759 [Selaginella moellendorffii]
Length = 580
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 82/199 (41%), Gaps = 20/199 (10%)
Query: 85 QATVSELRH------------ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRID 132
QA +ELRH I L K QR++ + E ++ K F SDS +
Sbjct: 86 QAIFNELRHQGQEFPAHIYNVIFGALAKLQRFQDVFRMVEDLMA-KNFTFSDSTADALVR 144
Query: 133 LMTKVFGIHSGERYFE-----GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN 187
+ K + R+ + GL ++ T E Y L+ ++A L+E ++ +N
Sbjct: 145 IFCKALAVDKAVRFLKWMSSKGLQVAMSTFE-YNCLIEGLCKGDRIDEALRLYELMRGNN 203
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 247
+ + YN M+ +G VE+ V++ ++ + PD F Y I+ N
Sbjct: 204 VPADIFTYNNMIECISKLGMVEQAEKVLKTMEESDCKPDKFIYTRVINGFCKLGNFKNAV 263
Query: 248 KFLDEMSCDSGGSDDWVKY 266
L M ++G + D V +
Sbjct: 264 VLLGRMK-EAGYAPDAVVF 281
>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 831
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 105/269 (39%), Gaps = 8/269 (2%)
Query: 141 HSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEM 198
HS FE + + +YT L+H YA A+ A E ++ +S NA Y+ +
Sbjct: 209 HSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEEMEAEGVSPNAATYSVI 268
Query: 199 MTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSG 258
++ Y +G VE + +N + YN I + N+++ + + M + G
Sbjct: 269 ISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCKAGNMERAEAIMTAME-EQG 327
Query: 259 GSDDWVKYVNLVNIYI---TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 315
Y L++ Y+ +N E ++ ++Y LI LY+ LG
Sbjct: 328 LEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSP-TVVSYGCLINLYSKLGKM 386
Query: 316 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNR 375
DK QI + K + Y I+ Y+ LG + + + I+ N
Sbjct: 387 DKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITY-NI 445
Query: 376 LLGAFSDVGLTEKANEFHMLLLQKNCAPT 404
L+ AF G +A E + +C PT
Sbjct: 446 LMNAFCKNGQMNRALELLARMESGDCPPT 474
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/330 (20%), Positives = 134/330 (40%), Gaps = 17/330 (5%)
Query: 69 KRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDS-DY 127
K SA + + G + V +++ +Q + A+ E M E V ++ Y
Sbjct: 208 KHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEEM--EAEGVSPNAATY 265
Query: 128 ATRIDLMTKVFGIHSGERYFEGLPLSAK---TSETYTALLHLYAGAKWTEKAEELFERVK 184
+ I ++ + + ER+F+ LS Y ++H Y A E+AE + ++
Sbjct: 266 SVIISGYGRLGDVEAAERWFQ-RALSENWHHNDVIYNNIIHAYCKAGNMERAEAIMTAME 324
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK---NVVPDIFTYNLWISSCAATL 241
+ L +YN +M Y+ V+K V +K + + P + +Y I+ +
Sbjct: 325 EQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPTVVSYGCLINLYSKLG 384
Query: 242 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWIT 301
+D+ + +EM D G + Y +++ Y+ NA S + + + IT
Sbjct: 385 KMDKALQISNEME-DQGIKHNRKTYSMIIDGYVQLGDTANA-FSVFEDMSNAGIKPDGIT 442
Query: 302 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 361
Y+ L+ + G ++ ++ + T R Y I+ ++ +G L+ E + K
Sbjct: 443 YNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMKIGDLRMAFETVRDMK 502
Query: 362 QSATSDFDISAC--NRLLGAFSDVGLTEKA 389
+ F SA N ++ + G ++A
Sbjct: 503 MAG---FRPSAATYNVIMHGLAQAGQMDRA 529
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 96/235 (40%), Gaps = 3/235 (1%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
T TYT ++ + A E +K + +A YN +M GQ+++ A +
Sbjct: 473 PTLRTYTIIIDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASI 532
Query: 215 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274
++E+ V P+ +Y I A ++ K+ + + + G D + Y +L+
Sbjct: 533 IDEMVVAGVHPNERSYTTLIEGYACIGDMGLAFKYFNRIK-EVGLKPDVIAYASLLKACC 591
Query: 275 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 334
A + + + T A + +I Y+ L+ +A G+ + I + +R
Sbjct: 592 KAGRMQSTLAITAEMAAAGVPMNNYI-YNILLDGWAQRGDMWEASDIMQKMRHEGLTPDI 650
Query: 335 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
+Y +++ G + + E I+Q KQ ++ A L+ ++ EKA
Sbjct: 651 HSYTSFINACCKAGDMLKATETIEQMKQQGVQP-NLQAYTTLIHGWASASYPEKA 704
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 95/242 (39%), Gaps = 26/242 (10%)
Query: 128 ATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN 187
A+ ID M V G+H ER +YT L+ YA A + F R+K+
Sbjct: 530 ASIIDEMV-VAGVHPNER-------------SYTTLIEGYACIGDMGLAFKYFNRIKEVG 575
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 247
L + + Y ++ G+++ + E+ V + + YN+ + A ++ +
Sbjct: 576 LKPDVIAYASLLKACCKAGRMQSTLAITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEAS 635
Query: 248 KFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLII 307
+ +M G + D Y + +N A ++ A + T+ + ++ Q Y LI
Sbjct: 636 DIMQKMR-HEGLTPDIHSYTSFINACCKAGDMLKA-TETIEQMKQQGVQPNLQAYTTLIH 693
Query: 308 LYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYL----------MLGHLKEVGEII 357
+A +K + ++ Y CI++S L G L+ E++
Sbjct: 694 GWASASYPEKALICYDEMKSAGMIPDKPLYHCIMTSLLSRAAVARETVFDGVLRVTSEMV 753
Query: 358 DQ 359
DQ
Sbjct: 754 DQ 755
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 36/198 (18%), Positives = 87/198 (43%), Gaps = 4/198 (2%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
+ T +Y L++LY+ +KA ++ ++ + N Y+ ++ Y+ +G
Sbjct: 367 SPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFS 426
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVK-YVNLVNI 272
V E++ + PD TYN+ +++ +++ + L M +SG ++ Y +++
Sbjct: 427 VFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARM--ESGDCPPTLRTYTIIIDG 484
Query: 273 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 332
++ L A T+ + + + + TY+ ++ A G D+ I + +
Sbjct: 485 FMKIGDLRMA-FETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHP 543
Query: 333 TSRNYICILSSYLMLGHL 350
R+Y ++ Y +G +
Sbjct: 544 NERSYTTLIEGYACIGDM 561
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 109/268 (40%), Gaps = 36/268 (13%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY ++ + + A + + + S N ++Y ++ ++ + V++E+
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K + + PDIF YN I + +D+ + FL EM ++G + Y ++ YI AS
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM-VENGLKPNAFTYGAFISGYIEASE 537
Query: 279 LVNAES---------------------STLVEAEKSI----TQRQWITYDFL------II 307
+A+ + + EK I R + L +
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 308 LYAGLGNKDKID---QIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
L GL DK+D +I++ +R +Y +++ + LG++++ I D+ +
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 365 TSDFDISACNRLLGAFSDVGLTEKANEF 392
+ ++ N LLG F G EKA E
Sbjct: 658 LTP-NVIIYNMLLGGFCRSGEIEKAKEL 684
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
++TYT L++ + AEE+F ++ ++ + Y ++ + +G ++K + + +
Sbjct: 592 AKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFD 651
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
E+ + + P++ YN+ + + I++ K+ LDEMS G + V Y +++ Y +
Sbjct: 652 EMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV-KGLHPNAVTYCTIIDGYCKS 710
Query: 277 SHLVNA 282
L A
Sbjct: 711 GDLAEA 716
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 125/324 (38%), Gaps = 44/324 (13%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSET--YTALLHLYAGAKWTEKAEELFERVK 184
Y I+ +K+ + F+ + T Y LL + + EKA+EL + +
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS 689
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCA------ 238
L NA+ Y ++ Y G + + + +E+K K +VPD F Y + C
Sbjct: 690 VKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVE 749
Query: 239 -----------------ATLN--IDQVKKF------------LDEMSCDSGGSDDWVKYV 267
A N I+ V KF L + S D G + V Y
Sbjct: 750 RAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTY- 808
Query: 268 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 327
N++ Y+ + A + + + ITY L+ Y +G + ++ ++
Sbjct: 809 NIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIA 868
Query: 328 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ-WKQSATSD---FDISACNRLLGAFSDV 383
+ Y I++++L G + ++DQ + ++A D IS C LL F+ V
Sbjct: 869 AGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKV 928
Query: 384 GLTEKANEFHMLLLQKNCAPTNAS 407
G E A + +++ P +A+
Sbjct: 929 GEMEVAEKVMENMVRLQYIPDSAT 952
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 53/268 (19%), Positives = 109/268 (40%), Gaps = 39/268 (14%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y L++ ++ +KA +F+ + + L+ N ++YN ++ + G++EK +++E+
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN------- 271
K + P+ TY I + ++ + + DEM D +V Y LV+
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFV-YTTLVDGCCRLND 747
Query: 272 ----IYITASHLVNAESSTL--------------VEAEKSITQRQW------------IT 301
I I ++ SST E + + R +T
Sbjct: 748 VERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVT 807
Query: 302 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 361
Y+ +I GN + +++ ++ T Y +L+ Y +G E+ + D+
Sbjct: 808 YNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDE-A 866
Query: 362 QSATSDFDISACNRLLGAFSDVGLTEKA 389
+A + D + ++ AF G+T KA
Sbjct: 867 IAAGIEPDHIMYSVIINAFLKEGMTTKA 894
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 5/147 (3%)
Query: 174 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 233
EKA+ LF+ + S L A Y ++ Y V + ++ E+K++N+V +TY
Sbjct: 364 EKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTV 423
Query: 234 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 293
+ ++ ++D + EM SG + V Y L+ ++ S +A L E ++
Sbjct: 424 VKGMCSSGDLDGAYNIVKEMIA-SGCRPNVVIYTTLIKTFLQNSRFGDA-MRVLKEMKEQ 481
Query: 294 ITQRQWITYDFLIILYAGLGNKDKIDQ 320
Y+ LII GL ++D+
Sbjct: 482 GIAPDIFCYNSLII---GLSKAKRMDE 505
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 8/203 (3%)
Query: 168 AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 227
G +KA +L + + + + Y++++T +VEK L+ +E+K V PD+
Sbjct: 264 CGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDV 323
Query: 228 FTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES-- 284
+TY + I S C A L I+Q + +EM G S V Y L++ Y+ A + A
Sbjct: 324 YTYTILIDSFCKAGL-IEQAQWLFEEMR-SVGCSPTVVTYTALIHAYLKAKQVPQANDIF 381
Query: 285 STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY 344
+V+A + +TY L+ GN K +++ L T S Y +
Sbjct: 382 HRMVDAG---CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRH 438
Query: 345 LMLGHLKEVGEIIDQWKQSATSD 367
+ ++ G ++D ++ D
Sbjct: 439 TLAPNVVTYGALVDGLCKAHKVD 461
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 128/321 (39%), Gaps = 26/321 (8%)
Query: 103 RYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TY 160
++ A ++ + M+ K FV S Y+ I + + F+ + + T + TY
Sbjct: 268 KFDKAFQLIKEMM-RKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTY 326
Query: 161 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 220
T L+ + A E+A+ LFE ++ S + Y ++ Y+ QV + + +
Sbjct: 327 TILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVD 386
Query: 221 KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM--SCDSGGSDDW-------------VK 265
P+ TY + NI + + ++ + DS SD + V
Sbjct: 387 AGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVT 446
Query: 266 YVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 325
Y LV+ + +H V+ L S + I YD LI + G D +++ L
Sbjct: 447 YGALVD-GLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF--L 503
Query: 326 RMTKQKM--TSRNYICILSSYLMLGHLKEVGEIIDQW-KQSATSDFDISACNRLLGAFSD 382
+MTK + Y ++ G L +++ Q K S T ++ ++
Sbjct: 504 QMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTP--NVVTYTAMIDGLCR 561
Query: 383 VGLTEKANEFHMLLLQKNCAP 403
+G +EKA + L+ +K C+P
Sbjct: 562 IGESEKALKLLSLMEEKGCSP 582
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYTA++ +EKA +L +++ S N + Y ++ G+++ + ++
Sbjct: 551 TYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQM 610
Query: 219 KRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268
RK P+ TY + I+ CAA L +D+ + L EM W KY+
Sbjct: 611 SRKGCSPNYVTYRVLINHLCAAGL-LDKARLLLGEMK-----QTYWPKYLQ 655
>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
Length = 1114
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/234 (18%), Positives = 105/234 (44%), Gaps = 3/234 (1%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLS 153
++ L K+ AL++ +++ ++F + Y ID ++K ++ ++ FEG+
Sbjct: 863 VISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDY 922
Query: 154 A--KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 211
Y L++ + A + A LF+R+ + + + Y+ ++ VG+V++
Sbjct: 923 GCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEG 982
Query: 212 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
E+K + PD+ YNL I+ +++ +EM G + D Y +L+
Sbjct: 983 LHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLI- 1041
Query: 272 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 325
+ + + +V E +++ + T++ LI Y+ G + +++++
Sbjct: 1042 LNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1095
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/167 (19%), Positives = 74/167 (44%), Gaps = 2/167 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y L+HL +++ +A E++ R+ + Y+ +M +E V +++E+
Sbjct: 192 SYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEM 251
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + P+++T+ + I I++ + L M D G D V Y L++ TA
Sbjct: 252 ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMD-DEGCGPDVVTYTVLIDALCTARK 310
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 325
L + + + + +TY L+ ++ + D ++Q W +
Sbjct: 311 L-DCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEM 356
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 77/184 (41%), Gaps = 5/184 (2%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
T+ TY + Y + + A E FE++K ++ N + N + G+ + +
Sbjct: 433 PTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQI 492
Query: 215 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274
+K +VPD TYN+ + + ID+ K L EM ++ D + +L+N
Sbjct: 493 FYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM-VENCCEPDVIVVNSLINTLY 551
Query: 275 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 334
A + A + E + + +TY+ L+ AGLG KI + + QK
Sbjct: 552 KADRVDEAWKMFMRMKEMKL-KPTVVTYNTLL---AGLGKNGKIQEAIELFEGMVQKGCP 607
Query: 335 RNYI 338
N I
Sbjct: 608 PNTI 611
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 8/224 (3%)
Query: 144 ERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM 203
E++ + L + K TY L+ A E A+++F +VK + + YN ++ Y
Sbjct: 775 EKFTKDLGVQPKLP-TYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYG 833
Query: 204 SVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW 263
G+++++ + +E+ P+ T+N+ IS N+D ++ D S
Sbjct: 834 KSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTA 893
Query: 264 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQ-WITYDFLIILYAGLGNKDKIDQIW 322
Y L++ + L E+ L E R Y+ LI + G D ++
Sbjct: 894 CTYGPLIDGLSKSGRLY--EAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALF 951
Query: 323 KSLRMTKQKMTS--RNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
K RM K+ + + Y ++ M+G + E + K+S
Sbjct: 952 K--RMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESG 993
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 93/233 (39%), Gaps = 3/233 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+T + + A +A E+ +R+ + + Y ++ + +++ V ++
Sbjct: 262 TFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKM 321
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K PD TY + + ++D V +F EM D G D V + LV+ A +
Sbjct: 322 KTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKD-GHVPDVVTFTILVDALCKAGN 380
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
A + V ++ I TY+ LI + D +I+ ++ K T+ YI
Sbjct: 381 FGEAFAKLDVMRDQGILPNLH-TYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYI 439
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 391
+ Y G E ++ K + +I ACN L + + G +A +
Sbjct: 440 VFIDYYGKSGDSVSALETFEKMKTKGIAP-NIVACNASLYSLAKAGRDREAKQ 491
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 126/287 (43%), Gaps = 13/287 (4%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTH--KEFVLSDSDYAT 129
A +V+ + + G Q T+ ++ L K ++ A+E+ + MV + V + Y T
Sbjct: 152 AFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYT---YTT 208
Query: 130 RIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSN 187
I+ + K+ + + + + TY+ ++ + + +A ++F +K
Sbjct: 209 IINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKG 268
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 247
+S + YN ++ + Q ++ + ++ E++ N++PDI T+N+ + + + + +
Sbjct: 269 ISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQ 328
Query: 248 KFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLII 307
L M+ + G D V Y +L+ Y S +V A K + +Y+ LI
Sbjct: 329 GVLKTMT-EMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKG-CKPDVFSYNILIN 386
Query: 308 LYAGLGNKDKIDQIWKSLRMTKQKMTSRN--YICILSSYLMLGHLKE 352
Y + D+ Q++ M Q +T N Y ++ LG L+E
Sbjct: 387 GYCKVKRIDEAKQLFN--EMIHQGLTPNNVSYNTLIHGLCQLGSLRE 431
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 105/255 (41%), Gaps = 47/255 (18%)
Query: 119 EFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--------TYTALLHLYAGA 170
E ++S + + T + G +R EG+ L + S+ TYT L+H + A
Sbjct: 387 ELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQA 446
Query: 171 KWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 230
+ + A+ +F+++ + N L YN ++ G++ K +V E ++R + PDI+TY
Sbjct: 447 RDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 506
Query: 231 NLWISSCAATLNIDQVKKFLDEMSCDSGGSDD-WVKYVNLVNIYITASHLVNAESSTLVE 289
N+ I E C +G +D W + NL
Sbjct: 507 NIMI-----------------EGMCKAGKVEDGWELFCNL-------------------- 529
Query: 290 AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGH 349
+ K ++ I Y+ +I + G+K++ D + K ++ S Y ++ + L G
Sbjct: 530 SLKGVSP-NVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGD 588
Query: 350 LKEVGEIIDQWKQSA 364
+ E+I + +
Sbjct: 589 REASAELIKEMRSCG 603
Score = 38.5 bits (88), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 47/250 (18%), Positives = 104/250 (41%), Gaps = 13/250 (5%)
Query: 159 TYTALLHLYAG-AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
TY++L+ +W++ A L + + ++ N + ++ ++ ++ G++ + + +E
Sbjct: 295 TYSSLISCLCNYGRWSD-ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
+ ++++ PDIFTY+ I+ +D+ K E+ + V Y L+ + A
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF-ELMISKDCFPNVVTYSTLIKGFCKAK 412
Query: 278 HLVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
+ +E + ++QR +TY LI + + D ++K +
Sbjct: 413 RVEEG-----MELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 467
Query: 334 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 393
Y +L G L + ++ ++ Q +T + DI N ++ G E E
Sbjct: 468 ILTYNILLDGLCKNGKLAK-AMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELF 526
Query: 394 MLLLQKNCAP 403
L K +P
Sbjct: 527 CNLSLKGVSP 536
Score = 37.7 bits (86), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 103/251 (41%), Gaps = 15/251 (5%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERV-----KQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
T ++LL+ Y +K A L +++ K +F L++ L++ E VAL
Sbjct: 155 TLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHG----LFLHNKASEAVAL 210
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD-DWVKYVNLVNI 272
V + ++R PD+ TY ++ +ID L +M + G + D V Y +++
Sbjct: 211 VDQMVQR-GCQPDLVTYGTVVNGLCKRGDIDLALSLLKKM--EKGKIEADVVIYNTIIDG 267
Query: 273 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 332
H+ +A + E + + TY LI G ++ + K
Sbjct: 268 LCKYKHMDDA-LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINP 326
Query: 333 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
+ ++ +++ G L E ++ D+ + + D DI + L+ F ++A
Sbjct: 327 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI-DPDIFTYSSLINGFCMHDRLDEAKHM 385
Query: 393 HMLLLQKNCAP 403
L++ K+C P
Sbjct: 386 FELMISKDCFP 396
>gi|359481811|ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Vitis vinifera]
Length = 848
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 82/190 (43%), Gaps = 2/190 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+T ++HLY+ E + F + L N + YN ++ Y S G ++ V EI
Sbjct: 341 TFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEI 400
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K+ PD+ +Y +++ + ++ K + M + + V Y L++ Y +
Sbjct: 401 KKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMR-RNHCKPNLVSYNALIDAYGSKGL 459
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L A L E E++ Q ++ L+ G K KI + + + K+ + Y
Sbjct: 460 LTEA-VEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYN 518
Query: 339 CILSSYLMLG 348
+ SYL +G
Sbjct: 519 SAIGSYLSVG 528
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/335 (20%), Positives = 144/335 (42%), Gaps = 14/335 (4%)
Query: 75 VIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLM 134
++ RWV ++ L ++E+ + +H++++ WM K + + Y I L
Sbjct: 116 LLNRWVGRFSRKNFPLL---IREITQIGSLEHSVQVFRWMKNQKNYCARNDIYNMMIRLH 172
Query: 135 TKVFGIHSGER--YFEGLPLSAKT-SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFN 191
+ I R +FE K +ETY AL++ + A A + + + ++ + +
Sbjct: 173 AR-HNIVDQARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPS 231
Query: 192 ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 251
YN ++ S G ++ V +++ V PD+ T+N+ +S+ +V + +
Sbjct: 232 RSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFE 291
Query: 252 EMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTL---VEAEKSITQRQWITYDFLIIL 308
M + D +N+V IY N ++ + ++ ++S +T+ +I L
Sbjct: 292 LMKGTNIRPD--TTTLNIV-IYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHL 348
Query: 309 YAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDF 368
Y+ G + + ++ K +Y ++ +Y G KE + ++ K++
Sbjct: 349 YSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHP- 407
Query: 369 DISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
D+ + LL A+ G EKA + L+ + +C P
Sbjct: 408 DVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKP 442
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 85/201 (42%), Gaps = 2/201 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y AL+ YA ++A +F +K++ + + Y ++ Y G+ EK V E +
Sbjct: 376 SYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELM 435
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+R + P++ +YN I + + + + + L EM +G + V L+
Sbjct: 436 RRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEME-RNGVQPNIVSICTLLAACGRCGQ 494
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
V + S L AE + Y+ I Y +G DK +++++R K K Y
Sbjct: 495 KVKIK-SVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYN 553
Query: 339 CILSSYLMLGHLKEVGEIIDQ 359
++S + E +D+
Sbjct: 554 VLISGCCKMSKYGEALGFLDE 574
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%)
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 247
+ N YN + Y+SVG+ +K + ++ K V PD TYN+ IS C +
Sbjct: 510 IKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEAL 569
Query: 248 KFLDEM 253
FLDEM
Sbjct: 570 GFLDEM 575
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 68/141 (48%), Gaps = 3/141 (2%)
Query: 100 KSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE- 158
K +Y AL + M+ K LS Y++ I +K + E F + + +
Sbjct: 561 KMSKYGEALGFLDEMMDLK-IPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDV 619
Query: 159 -TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
TYTA++H Y A+ EKA LF ++ ++ +++ + +M + GQ KV ++ E
Sbjct: 620 ITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEF 679
Query: 218 IKRKNVVPDIFTYNLWISSCA 238
++ K + + ++ +S+C+
Sbjct: 680 MREKKIPFNNSSFFEMVSACS 700
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 96/214 (44%), Gaps = 5/214 (2%)
Query: 149 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 208
G+P +A TY+ +LH + ++A +LF+ + N+ N L ++ ++ G V
Sbjct: 403 GIPPNA---VTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMV 459
Query: 209 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268
+ V E + K V P+I+TYN ++ +++ +K E+ G + D Y
Sbjct: 460 SEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVF-EIMVGKGCAPDLHSYNI 518
Query: 269 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 328
L+N Y + + A++ + K +T +TY+ ++ +G +++K + +
Sbjct: 519 LINGYCNSRRMDKAKALLTQMSVKKLTPNT-VTYNTIMKGLCYVGRLLDAQELFKKMCSS 577
Query: 329 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ 362
T Y +L+ GHL E ++ K+
Sbjct: 578 GMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKE 611
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 98/248 (39%), Gaps = 9/248 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+T L++ + A EL+ + +S + + YN ++ + G V +++
Sbjct: 165 TFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKM 224
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
++ P++ TYN I S ++ FL EM G D + Y ++V+
Sbjct: 225 EQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMV-GRGIPPDAITYNSIVHGLCCLGQ 283
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLI-ILYAGLGNKDKIDQIWKSLRMTKQKMTSR-- 335
L N + E++ + +TY+ +I LY D D + + M Q +
Sbjct: 284 L-NEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSE---MVDQGIPPDVV 339
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 395
Y IL LG L E + + +Q D+ A N ++ + L A EF
Sbjct: 340 TYTTILHGLCYLGQLNEAIRLFKKMEQKGCKP-DVVAYNTIIDSLCKDRLVNDAMEFLSE 398
Query: 396 LLQKNCAP 403
++ + P
Sbjct: 399 MVDRGIPP 406
>gi|356542070|ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Glycine max]
Length = 729
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 101/228 (44%), Gaps = 12/228 (5%)
Query: 184 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 243
K L+ N + Y ++ Y +VE+ +V+EE+ + + P++ TYN + +
Sbjct: 283 KCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKL 342
Query: 244 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI-TQRQWITY 302
D++K L+ M D G S D + +++++ A +L E+ + E+ K +Y
Sbjct: 343 DKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNL--DEALKVFESMKKFRIPADSASY 400
Query: 303 DFLIILYAGLGNKDKIDQIW-----KSLRMTK--QKMTSRNYICILSSYLMLGHLKEVGE 355
LI G+ D +Q++ K + ++K K + +Y I S G K+
Sbjct: 401 STLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYNPIFESLCEHGKTKKAER 460
Query: 356 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
+I Q + T D S ++G + G E E M +L+++ P
Sbjct: 461 VIRQLMKRGTQDPQ-SYTTVIMGHCKE-GAYESGYELLMWMLRRDFLP 506
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 84/187 (44%), Gaps = 14/187 (7%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLS 153
+L+ LR + AL +W K F + Y ++++ + ++ + +
Sbjct: 81 VLRTLRLIKDPSKALRFFKW-TQQKGFSHTPESYFIMLEILGRERNLNVARNFLFSIEKH 139
Query: 154 AKTS-----ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 208
+K + + +L+ YA A +++ +LF+ +K +S + + +N +M++ + G+
Sbjct: 140 SKGTVKLEDRFFNSLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRT 199
Query: 209 EKVALVVEE-IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM---SCDSGGSDDWV 264
V +E + V PD TYN+ I +D+ +F EM +CD+ D V
Sbjct: 200 NMAKEVYDEMLGTYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDA----DVV 255
Query: 265 KYVNLVN 271
Y LV+
Sbjct: 256 TYNTLVD 262
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT L+ Y + E+A + E + L N + YN ++ +++K+ V+E +
Sbjct: 293 TYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERM 352
Query: 219 KRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
K PD FT+N I N+D+ K + M
Sbjct: 353 KSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESM 388
>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
Length = 759
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 5/150 (3%)
Query: 127 YATRIDLMTKVFGI---HSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERV 183
Y T +D+ ++ HS R E AK TY ALL Y +A L E +
Sbjct: 333 YNTMVDIHARLGNFDEAHSIRRAMEEAGF-AKDIVTYNALLDSYGKQGKFREAMSLLEEM 391
Query: 184 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 243
KQ S N L Y+ ++ Y G + +++K+ + PD+ Y+ + C +
Sbjct: 392 KQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSP 451
Query: 244 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
D+ L+EM+ D+G + + Y +L++ Y
Sbjct: 452 DEALALLEEMA-DNGIRPNVITYNSLLDAY 480
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 131/332 (39%), Gaps = 36/332 (10%)
Query: 90 ELRHILKELRKSQRYKHALEISEWMVTHKEF----------------VLSDSDYATRIDL 133
+L I++EL S +++ ++ +WMV + L SD+A I
Sbjct: 85 DLPFIVRELGHSGQWEKVVKSFDWMVLQQNLRSQWDKVTSTIISSLGRLGRSDWAQLI-- 142
Query: 134 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 193
+ G G F Y++L+ Y + KA E+FE +K N +
Sbjct: 143 FDRAVGAGFGNNVF-----------VYSSLICAYGRSGKLAKAVEIFEAMKVV-CKPNLV 190
Query: 194 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
+YN ++ G + E+ + + PD T+N IS+ ++ + EM
Sbjct: 191 VYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEM 250
Query: 254 SCDSGGSDDWVKYVNLVNIYITAS--HLVNAESSTLVEAEKSITQRQWITYDFLIILYAG 311
+ G + D V Y L+ Y HL A T+ A+ S + ITY +I YA
Sbjct: 251 E-ERGIARDDVTYNTLIATYCRGGQMHLGAALMETM--AKSSGIEPSVITYSTMIDGYAK 307
Query: 312 LGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDIS 371
LG + +++ +R + Y ++ + LG+ E I +++ + DI
Sbjct: 308 LGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAK-DIV 366
Query: 372 ACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
N LL ++ G +A + Q+ +P
Sbjct: 367 TYNALLDSYGKQGKFREAMSLLEEMKQRGASP 398
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 78/187 (41%), Gaps = 7/187 (3%)
Query: 124 DSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE---TYTALLHLYAGAKWTEKAEELF 180
D Y T I + +H G E + S+ TY+ ++ YA +A LF
Sbjct: 259 DVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALF 318
Query: 181 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 240
+ ++ N+ + + YN M+ ++ +G ++ + ++ DI TYN + S
Sbjct: 319 QEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQ 378
Query: 241 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVE-AEKSITQRQW 299
+ L+EM G S + + Y L++ Y H + ++ L + +K+ Q
Sbjct: 379 GKFREAMSLLEEMK-QRGASPNILTYSALIDAY--CKHGFHRDAMALFQDVKKAGLQPDV 435
Query: 300 ITYDFLI 306
+ Y L+
Sbjct: 436 VLYSTLV 442
>gi|356533844|ref|XP_003535468.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Glycine max]
Length = 813
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 102/236 (43%), Gaps = 5/236 (2%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
S TY L+ Y A ++A E F ++ + ++ + +N M+ + + GQ+E+V+L+V
Sbjct: 273 SHTYNTLIDTYGKAGQLKEASETFAKMLKQGVAPTTVTFNTMINICGNHGQLEEVSLLVR 332
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
+++ P+ TYN+ IS A +I K+ + M ++ D V Y L+ Y
Sbjct: 333 KMEELRCSPNTRTYNILISLYAKHDDIGMATKYFEIMK-EACLEPDLVSYRTLLYAYSIR 391
Query: 277 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 336
+ AE E+ + Q+ T L +Y G D+ +W MTS
Sbjct: 392 KMVGEAEELVKEMDERRLEIDQY-TQSALTRMYIKAGMLDQ-SLLWFLRFHVAGNMTSEC 449
Query: 337 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
Y + +Y GH E E + W Q + + N ++ A+ EKA +
Sbjct: 450 YAASIDAYGEHGHTLE-AEKVFIWSQK-QKNLSVLEFNVMIKAYGIGKCYEKACQL 503
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 96/208 (46%), Gaps = 2/208 (0%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
+ ++ Y K EKA +LF+ ++Q + + Y ++ + + Q +++++
Sbjct: 484 FNVMIKAYGIGKCYEKACQLFDSMEQHGVVADRCSYTSLIQILTTSDQPHMAKPYLKKMQ 543
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
+V D Y + I S A ++ + EM G D + Y L+N++ A +
Sbjct: 544 EAGLVSDCIPYCVVICSFAKLGQLEMAEDIYWEM-IRHGVQPDVIVYSILINVFSDAGRV 602
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 339
A S + E +K+ + Y+ LI LYA + N +K + +K L+++++ + C
Sbjct: 603 KEA-ISYVDEMKKAGLPGNTVIYNSLIKLYAKIDNLEKAQEAYKLLQLSEEGPNVYSSNC 661
Query: 340 ILSSYLMLGHLKEVGEIIDQWKQSATSD 367
++ Y+ + + +I D K++ ++
Sbjct: 662 MIDLYVKQSMVGQAKQIFDTLKKNGGAN 689
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/254 (19%), Positives = 108/254 (42%), Gaps = 39/254 (15%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+YT+L+ + + A+ ++++++ L + + Y ++ + +GQ+E + E+
Sbjct: 518 SYTSLIQILTTSDQPHMAKPYLKKMQEAGLVSDCIPYCVVICSFAKLGQLEMAEDIYWEM 577
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
R V PD+ Y++ I+ + + + ++DEM +G + V Y +L+ +Y +
Sbjct: 578 IRHGVQPDVIVYSILINVFSDAGRVKEAISYVDEMK-KAGLPGNTVIYNSLIKLYAKIDN 636
Query: 279 LVNAESS--------------------TLVEAEKSITQRQWI-------------TYDFL 305
L A+ + L + + Q + I T+ +
Sbjct: 637 LEKAQEAYKLLQLSEEGPNVYSSNCMIDLYVKQSMVGQAKQIFDTLKKNGGANEFTFAMM 696
Query: 306 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 365
+ LY + D+ QI K +R +T +Y +L Y + G KE I+ +K+
Sbjct: 697 LCLYKKIERFDEAIQIAKQIRKLG-PLTELSYNNVLDLYAIAGRPKEA---IETFKEMVR 752
Query: 366 SDFDISACN-RLLG 378
+ ++ C+ R LG
Sbjct: 753 ASIQVNDCSLRSLG 766
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 20/117 (17%)
Query: 159 TYTALLHLYAGAKWTEKAEELF-----------------ERVKQSNLSFNALMYNEMMTL 201
T ++ LY A +KAEE F ERV +N SF + YN ++
Sbjct: 223 TMVIVVQLYKKAGEFQKAEEFFKKWSLGNDNAMATLELDERVVCANASFGSHTYNTLIDT 282
Query: 202 YMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK---KFLDEMSC 255
Y GQ+++ + ++ ++ V P T+N I+ C +++V + ++E+ C
Sbjct: 283 YGKAGQLKEASETFAKMLKQGVAPTTVTFNTMINICGNHGQLEEVSLLVRKMEELRC 339
>gi|297739653|emb|CBI29835.3| unnamed protein product [Vitis vinifera]
Length = 852
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 82/190 (43%), Gaps = 2/190 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+T ++HLY+ E + F + L N + YN ++ Y S G ++ V EI
Sbjct: 341 TFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEI 400
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K+ PD+ +Y +++ + ++ K + M + + V Y L++ Y +
Sbjct: 401 KKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMR-RNHCKPNLVSYNALIDAYGSKGL 459
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L A L E E++ Q ++ L+ G K KI + + + K+ + Y
Sbjct: 460 LTEA-VEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYN 518
Query: 339 CILSSYLMLG 348
+ SYL +G
Sbjct: 519 SAIGSYLSVG 528
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/338 (18%), Positives = 145/338 (42%), Gaps = 20/338 (5%)
Query: 75 VIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLM 134
++ RWV ++ L ++E+ + +H++++ WM K + + Y ++M
Sbjct: 116 LLNRWVGRFSRKNFPLL---IREITQIGSLEHSVQVFRWMKNQKNYCARNDIY----NMM 168
Query: 135 TKVFGIHSGERYFEGLPLSAKT------SETYTALLHLYAGAKWTEKAEELFERVKQSNL 188
++ H+ GL + +ETY AL++ + A A + + + ++ +
Sbjct: 169 IRLHARHNIVDQARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAI 228
Query: 189 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 248
+ YN ++ S G ++ V +++ V PD+ T+N+ +S+ +V
Sbjct: 229 PPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLS 288
Query: 249 FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTL---VEAEKSITQRQWITYDFL 305
+ + M + D +N+V IY N ++ + ++ ++S +T+ +
Sbjct: 289 YFELMKGTNIRPD--TTTLNIV-IYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTI 345
Query: 306 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 365
I LY+ G + + ++ K +Y ++ +Y G KE + ++ K++
Sbjct: 346 IHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGF 405
Query: 366 SDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
D+ + LL A+ G EKA + L+ + +C P
Sbjct: 406 HP-DVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKP 442
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 85/201 (42%), Gaps = 2/201 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y AL+ YA ++A +F +K++ + + Y ++ Y G+ EK V E +
Sbjct: 376 SYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELM 435
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+R + P++ +YN I + + + + + L EM +G + V L+
Sbjct: 436 RRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEME-RNGVQPNIVSICTLLAACGRCGQ 494
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
V + S L AE + Y+ I Y +G DK +++++R K K Y
Sbjct: 495 KVKIK-SVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYN 553
Query: 339 CILSSYLMLGHLKEVGEIIDQ 359
++S + E +D+
Sbjct: 554 VLISGCCKMSKYGEALGFLDE 574
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%)
Query: 188 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 247
+ N YN + Y+SVG+ +K + ++ K V PD TYN+ IS C +
Sbjct: 510 IKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEAL 569
Query: 248 KFLDEM 253
FLDEM
Sbjct: 570 GFLDEM 575
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 68/141 (48%), Gaps = 3/141 (2%)
Query: 100 KSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE- 158
K +Y AL + M+ K LS Y++ I +K + E F + + +
Sbjct: 561 KMSKYGEALGFLDEMMDLK-IPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDV 619
Query: 159 -TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
TYTA++H Y A+ EKA LF ++ ++ +++ + +M + GQ KV ++ E
Sbjct: 620 ITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEF 679
Query: 218 IKRKNVVPDIFTYNLWISSCA 238
++ K + + ++ +S+C+
Sbjct: 680 MREKKIPFNNSSFFEMVSACS 700
>gi|356557983|ref|XP_003547289.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 707
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 94/207 (45%), Gaps = 3/207 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T +A+++ YA + +KA L++R +A ++ ++ +Y G ++ + +E+
Sbjct: 242 TCSAMVYAYALSNNVDKAVSLYDRAIAEKWCLDAAAFSALIKMYSMAGNYDRCLKIYQEM 301
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K V P++ TYN + + Q K EM +G S D++ Y L+ +Y T +H
Sbjct: 302 KVLGVKPNVVTYNTLLGAMLKAEKHRQAKAIYKEMR-SNGVSPDFITYACLLEVY-TIAH 359
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ-KMTSRNY 337
E + + Y+ L+ +YA +G D+ +I+ + + + S +
Sbjct: 360 YSEDALGVYKEMKGNGMDMTADLYNKLLAMYADMGYIDRAVEIFYEMNSSGTCQPDSWTF 419
Query: 338 ICILSSYLMLGHLKEVGEIIDQWKQSA 364
+++ Y G + E ++++ QS
Sbjct: 420 ASLIAIYSRSGKVSEAEGMLNEMIQSG 446
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 78/399 (19%), Positives = 157/399 (39%), Gaps = 35/399 (8%)
Query: 21 RPNSDYECF-FYSR------FLSSGSSQNECLDEETSNSDGKDDLKS-RIFRISL---PK 69
+P + Y F ++SR F S + L + +N+ D KS + + S+ PK
Sbjct: 35 KPITTYNSFSYFSRHFKLPTFPLSHNKPKTLLQVQAANTPQDPDAKSSPLPQTSIWVNPK 94
Query: 70 RSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYAT 129
+ + +++++L L +Q++ +SE + + V +SD
Sbjct: 95 SPRAKHLWKNPYHARSSSLTKLAKSLDSCNPTQQH-----VSEILRVLGDNVF-ESDAVV 148
Query: 130 RIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLS 189
++ M + YF ++ Y L L+ ++ E AE+LF+ + Q +
Sbjct: 149 ILNSMVNPYTALLAVNYFNQKIKPSRHVVLYNVTLKLFRASRDFEGAEKLFDEMLQRGVK 208
Query: 190 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 249
N ++ M V K + E++ PD T + + + A + N+D+
Sbjct: 209 PNNFTFSTM------VNCANKPVELFEKMSGFGYEPDGITCSAMVYAYALSNNVDKAVSL 262
Query: 250 LDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI--TQRQWITYDFLII 307
D + D + L+ +Y A N + + E + + +TY+ L+
Sbjct: 263 YDRAIAEK-WCLDAAAFSALIKMYSMAG---NYDRCLKIYQEMKVLGVKPNVVTYNTLLG 318
Query: 308 LYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSD 367
+ I+K +R Y C+L Y + H E + + +K+ +
Sbjct: 319 AMLKAEKHRQAKAIYKEMRSNGVSPDFITYACLLEVY-TIAHYSE--DALGVYKEMKGNG 375
Query: 368 FDISA--CNRLLGAFSDVGLTEKANE-FHMLLLQKNCAP 403
D++A N+LL ++D+G ++A E F+ + C P
Sbjct: 376 MDMTADLYNKLLAMYADMGYIDRAVEIFYEMNSSGTCQP 414
>gi|302816153|ref|XP_002989756.1| hypothetical protein SELMODRAFT_428276 [Selaginella moellendorffii]
gi|300142533|gb|EFJ09233.1| hypothetical protein SELMODRAFT_428276 [Selaginella moellendorffii]
Length = 495
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 70/167 (41%), Gaps = 5/167 (2%)
Query: 65 ISLPKRSATNVIQRWVSEGNQATVSE-LRHILKELRKSQRYKHALEISEWMVTHKEFVLS 123
I+ P RS V+ W + E L + ++L QR+ +I W++ K +S
Sbjct: 69 IANPYRSPKAVVAEWQEQTKTKFTREMLFKLFRKLWGRQRHDQVYKIMRWVLVDKPLPVS 128
Query: 124 DSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERV 183
Y + K + +R F+ +P AKT YT ++ Y KAE + +
Sbjct: 129 SKIYELSMKAAQKANKLQVVKRIFDDMPPEAKTPAVYTRIMSAYCNKNRANKAEFILD-- 186
Query: 184 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 230
S A +N++M +Y+ + + EK +++ + P T+
Sbjct: 187 --SFTPTTAQAHNQLMLMYIRMEEDEKAVDAYNRMRKAGIKPSDLTF 231
>gi|452823780|gb|EME30788.1| mitochondrial protein translocase, MPT family [Galdieria
sulphuraria]
Length = 925
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 114/265 (43%), Gaps = 22/265 (8%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
S Y++LL + + A +++E ++Q +A MYN ++ S+G +E +V
Sbjct: 469 SYVYSSLLQACVRSNRFDLALKVYEHLQQEGYVMDAHMYNTLVNGAGSLGDLETAERLVR 528
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGS---DDWVKYVNLVNIY 273
+ + NV D N ++ SCA +I + + EMS + GS + Y L+N+Y
Sbjct: 529 QAQEYNVGLDTALCNTFLVSCAKHHDISRAEHLFLEMSNGNMGSLALPNGKTYNILINLY 588
Query: 274 ITASHLVNAESSTLVEAEKSITQRQWI--------TYDFLIILYAGLGNKDKIDQIWKSL 325
+ VE + +RQ + T+ +I Y + + K +++K L
Sbjct: 589 CKM-------NPPQVERALEMVERQRMYGFSPDESTFCPIIDAYFRVNDPFKAIELFKKL 641
Query: 326 RMTKQKMTSR-NYICILSSYLMLGHLKEVGEIIDQWKQSATS--DFDISACNRLLGAFSD 382
R SR Y +++ G+L + E+ + + S TS D + N LL AF +
Sbjct: 642 RTEGSPKLSRVTYDTVINGLGRSGYLDDAFEVF-RIRASETSLESLDDTTYNNLLNAFVE 700
Query: 383 VGLTEKANEFHMLLLQKNCAPTNAS 407
++A F L P+ A+
Sbjct: 701 NNRLDEAERFFQESLASGFQPSTAT 725
>gi|125537564|gb|EAY84052.1| hypothetical protein OsI_39281 [Oryza sativa Indica Group]
Length = 762
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/349 (20%), Positives = 127/349 (36%), Gaps = 41/349 (11%)
Query: 95 LKELRKSQRYKHALEISEW--MVTHKEFVLSDSDYATRIDLMTKVFGIHS-GERYFEGL- 150
LK LR ++Y H L+ +W M H L A + + + K+ H+ +F+ L
Sbjct: 298 LKSLRSVEQYYHTLQQMKWVPMTGHVLDNLHCKIDAFQANQVLKLLHDHTIALGFFQWLK 357
Query: 151 --PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 208
P +YT ++ + A+ +L + + + + YN ++ Y +
Sbjct: 358 RQPGFKHDGHSYTTMIGILGQARQFGTMRKLLDEMNSVHCKPTVVTYNRIIHAYGRANYL 417
Query: 209 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268
+ V EE+++ PD TY I A ++ M + G S D Y
Sbjct: 418 REAVKVFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEVAMDLYTRMQ-EVGLSPDTFTYSA 476
Query: 269 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 328
+VN HL A E T +TY+ +I L A N + + +++K +++
Sbjct: 477 MVNCLGKGGHLAAAYKLFCEMVENGCTPN-LVTYNIMIALQAKARNYENVVKLYKDMQVA 535
Query: 329 KQKMTSRNYICILSSYLMLGHLKEV------------------GEIIDQWKQSATSD--- 367
+ Y ++ GHL E G ++D W ++ D
Sbjct: 536 GFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRHDWAPDEPVYGLLVDLWGKAGNVDKAL 595
Query: 368 ------------FDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 404
++ CN LL AF + + A +L + P+
Sbjct: 596 GWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQNMLAQGLVPS 644
>gi|356503440|ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Glycine max]
Length = 832
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 2/190 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+T+++HLY+ E E F + L N + YN ++ Y + G + L EI
Sbjct: 330 TFTSIIHLYSVCGQVENCEAAFNMMIAEGLKPNIVSYNALIGAYAARGMDNEAHLFFNEI 389
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K+ PDI +Y +++ + + ++ D M + + V Y L++ Y +
Sbjct: 390 KQNGFRPDIVSYTSLLNAYGRSQKPHKARQIFDRMK-RNKLKPNLVSYNALIDAYGSNGL 448
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L +A L E E+ Q ++ L+ K KID + + M K+ + Y
Sbjct: 449 LADA-IKILREMEQEGIQPNVVSICTLLAACGRCSRKVKIDTVLTAAEMRGIKLNTVAYN 507
Query: 339 CILSSYLMLG 348
+ S + +G
Sbjct: 508 AAIGSCMNVG 517
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 108/250 (43%), Gaps = 7/250 (2%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
++ Y ++ L+A T++A LF +++ + YN ++ + GQ +++
Sbjct: 151 NDIYNMMIRLHARHNRTDQARGLFFEMQEWRCKPDVETYNAIINAHGRAGQWRWAMNIMD 210
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
++ R + P TYN I++C ++ N + +M+ ++G D V + +++ + +
Sbjct: 211 DMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMT-ENGVGPDLVTHNIILSAFKSG 269
Query: 277 SHLVNAESSTLVEAEKSITQRQ-WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 335
+ A S E K R T + +I L DK +I+ S+R K + T
Sbjct: 270 AQYSKALS--YFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIEIFNSMREKKSECTPD 327
Query: 336 --NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 393
+ I+ Y + G ++ + +I + N L+GA++ G+ +A+ F
Sbjct: 328 VVTFTSIIHLYSVCGQVENCEAAFNMMIAEGLKP-NIVSYNALIGAYAARGMDNEAHLFF 386
Query: 394 MLLLQKNCAP 403
+ Q P
Sbjct: 387 NEIKQNGFRP 396
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 3/141 (2%)
Query: 100 KSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE- 158
K +Y AL E + H + LS Y++ I +K I E F + S +
Sbjct: 550 KMSKYGEALSFME-EIMHLKLPLSKEVYSSAICAYSKQGQIVEAESTFNLMKSSGCYPDV 608
Query: 159 -TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
TYTA+L Y A+ EKA LFE ++ S++ + + +M + GQ +V + E
Sbjct: 609 VTYTAMLDAYNAAENWEKAYALFEEMEASSIKLDTIACAALMRSFNKGGQPGRVLSLAES 668
Query: 218 IKRKNVVPDIFTYNLWISSCA 238
++ K + + +S+C+
Sbjct: 669 MREKEIPFSDTIFFEMVSACS 689
>gi|224077524|ref|XP_002305285.1| predicted protein [Populus trichocarpa]
gi|222848249|gb|EEE85796.1| predicted protein [Populus trichocarpa]
Length = 523
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 84/192 (43%), Gaps = 11/192 (5%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
Y +LL ++A ++F + + +A Y + Y + V V++ +
Sbjct: 254 AYNSLLEALCKGGNVDEAYKMFREIGSHGVEPDACSYAIFIRAYCEANNIHSVFSVLDRM 313
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
KR ++VP++FTYN I ++ + L EM + G S D Y ++ + S
Sbjct: 314 KRYDLVPNVFTYNCIIKKLCKNGKVEDAYQLLHEMM-ERGVSPDAWSYNTILAYHCEHSE 372
Query: 279 LVNAES-STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337
+ A +++ + + R +Y+ L+ L +G D+ +IW+S M R +
Sbjct: 373 VNRATKLISIMVKDNCLPDRH--SYNMLLKLLVRVGRFDRATEIWES-------MGERGF 423
Query: 338 ICILSSYLMLGH 349
+S+Y ++ H
Sbjct: 424 YPSVSTYSVMIH 435
>gi|22327132|ref|NP_680234.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174514|sp|Q9LKU8.1|PP401_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g28460
gi|9502149|gb|AAF88002.1| contains similarity to Pfam family PF01535 (Domain of unknown
function), score=340.5, E=1.9e-98, N=2 [Arabidopsis
thaliana]
gi|15529206|gb|AAK97697.1| AT5g28460/F21B23_120 [Arabidopsis thaliana]
gi|27363272|gb|AAO11555.1| At5g28460/F21B23_120 [Arabidopsis thaliana]
gi|332006418|gb|AED93801.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 766
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/370 (20%), Positives = 148/370 (40%), Gaps = 51/370 (13%)
Query: 85 QATVSELRHILKELRKSQRYKHALEISEWMVTHK----EFVLSDS-DYATRIDLMTKVFG 139
+ V L ++ L KS+R ALE+ E M + + +DS + T ID + KV
Sbjct: 326 RPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGR 385
Query: 140 IHSGERYFEGLPLSAK---TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYN 196
+ E + L + + TY L+ Y A E A+E+ R+K+ + N + N
Sbjct: 386 LKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVN 445
Query: 197 EMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM--- 253
++ + + +++++ V ++ TY I +C + N+++ + ++M
Sbjct: 446 TIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEA 505
Query: 254 SC-------------------------------DSGGSDDWVKYVNLVNIYITASHLVNA 282
C + G S D + Y L+ ++ + NA
Sbjct: 506 GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKN---NA 562
Query: 283 ES--STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICI 340
E L + EK + ITY+ LI + + + ++++ + +R T Y +
Sbjct: 563 EKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAV 622
Query: 341 LSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA----NEFHMLL 396
+ +Y +G L E ++ + + + N L+ AFS +G +A E M +
Sbjct: 623 IDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKM 682
Query: 397 LQKNCAPTNA 406
++ N NA
Sbjct: 683 VRPNVETYNA 692
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 112/254 (44%), Gaps = 15/254 (5%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY AL++ A+ A++L ++ + ++ +N ++ Y GQ+EK +V+ E+
Sbjct: 412 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM 471
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA-- 276
+ + P++ +Y +++ I + LD+M D + + N I A
Sbjct: 472 QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF-----HKDVLPNAQVYNAIIDAYV 526
Query: 277 SHLVNAESSTLVEAEKS-ITQRQWITYDFLIILYAGLGNKDKI---DQIWKSLRMTKQKM 332
H N ++ LVE KS +TY+ LI GL N+ +I ++I SL +
Sbjct: 527 EHGPNDQAFILVEKMKSNGISPSIVTYNLLI---KGLCNQSQISEAEEIINSLSNHRLIP 583
Query: 333 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
+ +Y ++S+ G++ + ++ + + + ++L+ G +
Sbjct: 584 DAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKS-TVRTYHQLISGLGGAGRLNEMEYL 642
Query: 393 HMLLLQKNCAPTNA 406
+ ++Q N P+NA
Sbjct: 643 YQKMMQNNVVPSNA 656
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 106/249 (42%), Gaps = 11/249 (4%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
T ET+ L+ Y EK + ++++ L N + Y ++ + G++ + +
Sbjct: 443 PTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAI 502
Query: 215 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274
++++ K+V+P+ YN I + DQ +++M +G S V Y L+
Sbjct: 503 LDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMK-SNGISPSIVTYNLLIKGLC 561
Query: 275 TASHLVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 330
S + AE E S++ + I +Y+ LI GN DK + + +
Sbjct: 562 NQSQISEAE-----EIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 616
Query: 331 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 390
K T R Y ++S G L E+ + + Q+ + + N ++ A+S G KA
Sbjct: 617 KSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSN-AIHNIMVEAYSKYGNEIKAE 675
Query: 391 EFHMLLLQK 399
+ +LQK
Sbjct: 676 DLRKEMLQK 684
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Query: 176 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
AEE+ + + + L ++YN ++ Y G++E ++K +++ PD TYN I+
Sbjct: 359 AEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALIN 418
Query: 236 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
I + L EM D+G + + L++ Y
Sbjct: 419 GLCKAERITNAQDLLMEMQ-DNGVNPTVETFNTLIDAY 455
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 112/254 (44%), Gaps = 15/254 (5%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY AL++ A+ A++L ++ + ++ +N ++ Y GQ+EK +V+ E+
Sbjct: 275 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM 334
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA-- 276
+ + P++ +Y +++ I + LD+M D + + N I A
Sbjct: 335 QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF-----HKDVLPNAQVYNAIIDAYV 389
Query: 277 SHLVNAESSTLVEAEKS-ITQRQWITYDFLIILYAGLGNKDKI---DQIWKSLRMTKQKM 332
H N ++ LVE KS +TY+ LI GL N+ +I ++I SL +
Sbjct: 390 EHGPNDQAFILVEKMKSNGISPSIVTYNLLI---KGLCNQSQISEAEEIINSLSNHRLIP 446
Query: 333 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
+ +Y ++S+ G++ + ++ + + + ++L+ G +
Sbjct: 447 DAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKS-TVRTYHQLISGLGGAGRLNEMEYL 505
Query: 393 HMLLLQKNCAPTNA 406
+ ++Q N P+NA
Sbjct: 506 YQKMMQNNVVPSNA 519
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 106/249 (42%), Gaps = 11/249 (4%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
T ET+ L+ Y EK + ++++ L N + Y ++ + G++ + +
Sbjct: 306 PTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAI 365
Query: 215 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274
++++ K+V+P+ YN I + DQ +++M +G S V Y L+
Sbjct: 366 LDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMK-SNGISPSIVTYNLLIKGLC 424
Query: 275 TASHLVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 330
S + AE E S++ + I +Y+ LI GN DK + + +
Sbjct: 425 NQSQISEAE-----EIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 479
Query: 331 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 390
K T R Y ++S G L E+ + + Q+ + + N ++ A+S G KA
Sbjct: 480 KSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSN-AIHNIMVEAYSKYGNEIKAE 538
Query: 391 EFHMLLLQK 399
+ +LQK
Sbjct: 539 DLRKEMLQK 547
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Query: 176 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
AEE+ + + + L ++YN ++ Y G++E ++K +++ PD TYN I+
Sbjct: 222 AEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALIN 281
Query: 236 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
I + L EM D+G + + L++ Y
Sbjct: 282 GLCKAERITNAQDLLMEMQ-DNGVNPTVETFNTLIDAY 318
>gi|15241779|ref|NP_198189.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|9502152|gb|AAF88005.1| similar to a large family of Arabidopsis thaliana salt inducible
protein-like proteins; contains similarity to Pfam
family PF01535 (Domain of unknown function),
score=340.5, E=1.9e-98, N=2 [Arabidopsis thaliana]
gi|332006410|gb|AED93793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/370 (20%), Positives = 148/370 (40%), Gaps = 51/370 (13%)
Query: 85 QATVSELRHILKELRKSQRYKHALEISEWMVTHK----EFVLSDS-DYATRIDLMTKVFG 139
+ V L ++ L KS+R ALE+ E M + + +DS + T ID + KV
Sbjct: 326 RPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGR 385
Query: 140 IHSGERYFEGLPLSAK---TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYN 196
+ E + L + + TY L+ Y A E A+E+ R+K+ + N + N
Sbjct: 386 LKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVN 445
Query: 197 EMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM--- 253
++ + + +++++ V ++ TY I +C + N+++ + ++M
Sbjct: 446 TIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEA 505
Query: 254 SC-------------------------------DSGGSDDWVKYVNLVNIYITASHLVNA 282
C + G S D + Y L+ ++ + NA
Sbjct: 506 GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKN---NA 562
Query: 283 ES--STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICI 340
E L + EK + ITY+ LI + + + ++++ + +R T Y +
Sbjct: 563 EKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAV 622
Query: 341 LSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA----NEFHMLL 396
+ +Y +G L E ++ + + + N L+ AFS +G +A E M +
Sbjct: 623 IDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKM 682
Query: 397 LQKNCAPTNA 406
++ N NA
Sbjct: 683 VRPNVETYNA 692
Score = 41.2 bits (95), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 3/130 (2%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVK 184
Y T I K S ER E + T TY A++ Y ++A +LF+ +
Sbjct: 584 YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643
Query: 185 -QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 243
S ++ N ++YN ++ + +G + + EE+K K V P++ TYN
Sbjct: 644 LHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQG 703
Query: 244 DQVKKFLDEM 253
+ + K +DEM
Sbjct: 704 ETLLKLMDEM 713
>gi|302780731|ref|XP_002972140.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
gi|300160439|gb|EFJ27057.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
Length = 482
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/293 (19%), Positives = 121/293 (41%), Gaps = 8/293 (2%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
A +R +S G A+ ++ K+ R A+E+ +V + V++ + Y I
Sbjct: 155 AQQFYERLLSSGAGASFITYNILVDGFCKADRVPEAVELLNELVA-RGGVVTSAPYNCII 213
Query: 132 DLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLS 189
D + K IH E +F + + T+T L+ A +A+E+F +S S
Sbjct: 214 DTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGS 273
Query: 190 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 249
+ ++ + +M + G V++ + E + + P+ + N+ I+ + Q ++
Sbjct: 274 PSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREV 333
Query: 250 LDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILY 309
+E+ D V Y ++ A + A + +K T + Y LI
Sbjct: 334 FEEVV-KRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTP-DVVMYTALISGL 391
Query: 310 AGLGNKDKIDQIWKSLRMTKQKMTSRNYIC--ILSSYLMLGHLKEVGEIIDQW 360
LG D+ ++++ + M N+ C +++ + + G L E E+ ++
Sbjct: 392 CSLGRLDEARKVFE-VDMRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRF 443
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 42/238 (17%), Positives = 89/238 (37%), Gaps = 11/238 (4%)
Query: 174 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 233
+KAE F+ +K N + YN ++ + ++++ + E+K P TYN
Sbjct: 83 DKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEAIQLFGEMKAPGCAPSTSTYNTL 142
Query: 234 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 293
I + + ++F + + SG ++ Y LV+ + A + A VE
Sbjct: 143 IGGLCRVERLGEAQQFYERLL-SSGAGASFITYNILVDGFCKADRVPEA-----VELLNE 196
Query: 294 ITQRQWIT----YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGH 349
+ R + Y+ +I G + + + + + + ++
Sbjct: 197 LVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLIDGLCKANR 256
Query: 350 LKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
+ EI + +S S + C+ L+ F G ++A L+ + C P + S
Sbjct: 257 VARAKEIFFSYLESGGSP-SVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVS 313
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 58/324 (17%), Positives = 122/324 (37%), Gaps = 30/324 (9%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLP-- 151
+++EL K+ R + L++ + M+ ++ T ID + K I E +F+ L
Sbjct: 37 LVRELSKAGRAEECLKVVKLMLDRQQLRERHLVNIT-IDSLCKSDMIDKAESWFQELKDF 95
Query: 152 LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 211
+ +Y L++ + K ++A +LF +K + + YN ++ V ++ +
Sbjct: 96 RGLVNTVSYNILINAFCKTKRIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEA 155
Query: 212 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
E + TYN+ + + + + L+E+ GG Y +++
Sbjct: 156 QQFYERLLSSGAGASFITYNILVDGFCKADRVPEAVELLNELV-ARGGVVTSAPYNCIID 214
Query: 272 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 331
+ AE EK + Q +T+ L ID + K+ R+ + K
Sbjct: 215 TLFKKGKIHEAE-LFFNRMEKDGVRPQEVTFTVL------------IDGLCKANRVARAK 261
Query: 332 MTSRNYI------------CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGA 379
+Y+ C++ + G + E I + + D+S CN L+
Sbjct: 262 EIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVS-CNILING 320
Query: 380 FSDVGLTEKANEFHMLLLQKNCAP 403
+A E ++++ P
Sbjct: 321 LCKAKRLSQAREVFEEVVKRQAKP 344
>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
Length = 760
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 5/150 (3%)
Query: 127 YATRIDLMTKVFGI---HSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERV 183
Y T +D+ ++ HS R E AK TY ALL Y +A L E +
Sbjct: 334 YNTMVDIHARLGNFDEAHSIRRAMEEAGF-AKDIVTYNALLDSYGKQGKFREAMSLLEEM 392
Query: 184 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 243
KQ S N L Y+ ++ Y G + +++K+ + PD+ Y+ + C +
Sbjct: 393 KQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSP 452
Query: 244 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
D+ L+EM+ D+G + + Y +L++ Y
Sbjct: 453 DEALALLEEMA-DNGIRPNVITYNSLLDAY 481
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 131/332 (39%), Gaps = 36/332 (10%)
Query: 90 ELRHILKELRKSQRYKHALEISEWMVTHKEF----------------VLSDSDYATRIDL 133
+L I++EL S +++ ++ +WMV + L SD+A I
Sbjct: 86 DLPFIVRELGHSGQWEKVVKSFDWMVLQQNLRSQWDKVTSTIISSLGRLGRSDWAQLI-- 143
Query: 134 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 193
+ G G F Y++L+ Y + KA E+FE +K N +
Sbjct: 144 FDRAVGAGFGNNVF-----------VYSSLICAYGRSGKLAKAVEIFEAMKVV-CKPNLV 191
Query: 194 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
+YN ++ G + E+ + + PD T+N IS+ ++ + EM
Sbjct: 192 VYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEM 251
Query: 254 SCDSGGSDDWVKYVNLVNIYITAS--HLVNAESSTLVEAEKSITQRQWITYDFLIILYAG 311
+ G + D V Y L+ Y HL A T+ A+ S + ITY +I YA
Sbjct: 252 E-ERGIARDDVTYNTLIATYCRGGQMHLGAALMETM--AKSSGIEPSVITYSTMIDGYAK 308
Query: 312 LGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDIS 371
LG + +++ +R + Y ++ + LG+ E I +++ + DI
Sbjct: 309 LGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAK-DIV 367
Query: 372 ACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
N LL ++ G +A + Q+ +P
Sbjct: 368 TYNALLDSYGKQGKFREAMSLLEEMKQRGASP 399
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 78/187 (41%), Gaps = 7/187 (3%)
Query: 124 DSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE---TYTALLHLYAGAKWTEKAEELF 180
D Y T I + +H G E + S+ TY+ ++ YA +A LF
Sbjct: 260 DVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALF 319
Query: 181 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 240
+ ++ N+ + + YN M+ ++ +G ++ + ++ DI TYN + S
Sbjct: 320 QEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQ 379
Query: 241 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVE-AEKSITQRQW 299
+ L+EM G S + + Y L++ Y H + ++ L + +K+ Q
Sbjct: 380 GKFREAMSLLEEMK-QRGASPNILTYSALIDAY--CKHGFHRDAMALFQDVKKAGLQPDV 436
Query: 300 ITYDFLI 306
+ Y L+
Sbjct: 437 VLYSTLV 443
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 96/213 (45%), Gaps = 8/213 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
YT L+ ++ ++ LF+++++ ++ ++ + G+V+ +++E+
Sbjct: 170 AYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEM 229
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K ++ DI YN+ I S +D KF E+ + G D V Y +++ + A+
Sbjct: 230 KSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEAN-GLKPDEVTYTSMIGVLCKANR 288
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L A EK+ +R TY + ++ G G+ K D+ + L + K + + I
Sbjct: 289 LDEA-VEMFEHLEKN--RRVPCTYAYNTMI-MGYGSAGKFDEAYSLLERQRAKGSIPSVI 344
Query: 339 ---CILSSYLMLGHLKEVGEIIDQWKQSATSDF 368
CIL+ +G + E + ++ K+ A +
Sbjct: 345 AYNCILTCLRKMGKVDEALRVFEEMKKDAAPNL 377
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/337 (20%), Positives = 141/337 (41%), Gaps = 19/337 (5%)
Query: 75 VIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSD---YATRI 131
+ Q+ G + TV +++ K R AL + + M + D+D Y I
Sbjct: 190 LFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSS----LDADIVLYNVCI 245
Query: 132 DLMTKVFGIHSGERYFEGLPLSA-KTSE-TYTALLHLYAGAKWTEKAEELFERVKQSNLS 189
D KV + ++F + + K E TYT+++ + A ++A E+FE ++++
Sbjct: 246 DSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRV 305
Query: 190 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 249
YN M+ Y S G+ ++ ++E + K +P + YN ++ +D+ +
Sbjct: 306 PCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRV 365
Query: 250 LDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQ-WITYDFLIIL 308
+EM D+ + + Y L+++ A L A E S+ + + + I+
Sbjct: 366 FEEMKKDA--APNLSTYNILIDMLCRAGKLDCA-----FELRDSMQKAGLFPNVRTVNIM 418
Query: 309 YAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDF 368
L K+D+ K+ + + I S LG + V + +++ SD
Sbjct: 419 VDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDC 478
Query: 369 DISAC--NRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
++ L+ F + G E ++ + ++ +NC+P
Sbjct: 479 RTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSP 515
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 107/274 (39%), Gaps = 52/274 (18%)
Query: 121 VLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEE 178
VL Y ID K ++ + E + T TY +++ A ++A
Sbjct: 584 VLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYM 643
Query: 179 LFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCA 238
LFE K + N ++Y+ ++ + VG++++ L++EE+ +K + P+++T+N
Sbjct: 644 LFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWN------- 696
Query: 239 ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQ 298
+L++ + A + A E T Q
Sbjct: 697 -----------------------------SLLDALVKAEEINEALVCFQSMKELKCTPNQ 727
Query: 299 WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 358
+TY LI + +K W+ ++ K ++ +Y ++S G++ E G + D
Sbjct: 728 -VTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFD 786
Query: 359 QWKQSATSDFDISAC-----------NRLLGAFS 381
++K A SAC NR + AFS
Sbjct: 787 RFK--ANGGVPDSACYNAMIEGLSNGNRAMDAFS 818
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 118/292 (40%), Gaps = 12/292 (4%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLS 153
++ L KSQ+ A I E M +K + + + ID + KV + + +E + S
Sbjct: 418 MVDRLCKSQKLDEACAIFEQM-DYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDS 476
Query: 154 --AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 211
S YT+L+ + E ++++ + N S + + N M G+ EK
Sbjct: 477 DCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKG 536
Query: 212 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
+ EEIK + VPD +Y++ I ++ + M + G D Y +++
Sbjct: 537 RAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMK-EQGCVLDTRAYNIVID 595
Query: 272 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 331
+ VN L E + + +TY +I GL D++D+ + K K
Sbjct: 596 GFCKCGK-VNKAYQLLEEMKTKGFEPTVVTYGSVI---DGLAKIDRLDEAYMLFEEAKSK 651
Query: 332 MTSRN---YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAF 380
N Y ++ + +G + E I+++ Q + ++ N LL A
Sbjct: 652 RIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTP-NVYTWNSLLDAL 702
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYTAL+ Y ++A L ++ Q L+ N + Y + G+V+ ++ E+
Sbjct: 330 TYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEM 389
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
RK + +I+TYN ++ NIDQ K + +M +G D V Y L++ Y +
Sbjct: 390 CRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEV-AGFHPDAVTYTTLMDAYCKSRE 448
Query: 279 LVNA 282
+V A
Sbjct: 449 MVRA 452
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 53/126 (42%), Gaps = 1/126 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY ++ L +AE + + ++ + ++Y ++ + +G V + +E+
Sbjct: 225 TYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM 284
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+++ + PD TY I T + + K EM C D+ V Y L++ Y
Sbjct: 285 QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDE-VTYTALIDGYCKEGK 343
Query: 279 LVNAES 284
+ A S
Sbjct: 344 MKEAFS 349
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 81/193 (41%), Gaps = 7/193 (3%)
Query: 209 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268
E V ++EE++ K + P+ +TYN I T + + ++ L EM G + D V Y
Sbjct: 205 EWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREM-ISEGIAPDGVIYTT 263
Query: 269 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 328
L++ + + V++ E +K +ITY +I G + D+++ +
Sbjct: 264 LIDGFCKLGN-VSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCK 322
Query: 329 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEK 388
+ + Y ++ Y G +KE + +Q Q + +I L G +
Sbjct: 323 RLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTP-NIVTYTALADGLCKCGEVDT 381
Query: 389 ANEFHMLLLQKNC 401
ANE LL + C
Sbjct: 382 ANE----LLHEMC 390
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 112/254 (44%), Gaps = 15/254 (5%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY AL++ A+ A++L ++ + ++ +N ++ Y GQ+EK +V+ E+
Sbjct: 227 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM 286
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA-- 276
+ + P++ +Y +++ I + LD+M D + + N I A
Sbjct: 287 QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF-----HKDVLPNAQVYNAIIDAYV 341
Query: 277 SHLVNAESSTLVEAEKS-ITQRQWITYDFLIILYAGLGNKDKI---DQIWKSLRMTKQKM 332
H N ++ LVE KS +TY+ LI GL N+ +I ++I SL +
Sbjct: 342 EHGPNDQAFILVEKMKSNGISPSIVTYNLLI---KGLCNQSQISEAEEIINSLSNHRLIP 398
Query: 333 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
+ +Y ++S+ G++ + ++ + + + ++L+ G +
Sbjct: 399 DAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKS-TVRTYHQLISGLGGAGRLNEMEYL 457
Query: 393 HMLLLQKNCAPTNA 406
+ ++Q N P+NA
Sbjct: 458 YQKMMQNNVVPSNA 471
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 106/249 (42%), Gaps = 11/249 (4%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
T ET+ L+ Y EK + ++++ L N + Y ++ + G++ + +
Sbjct: 258 PTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAI 317
Query: 215 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274
++++ K+V+P+ YN I + DQ +++M +G S V Y L+
Sbjct: 318 LDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMK-SNGISPSIVTYNLLIKGLC 376
Query: 275 TASHLVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 330
S + AE E S++ + I +Y+ LI GN DK + + +
Sbjct: 377 NQSQISEAE-----EIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 431
Query: 331 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 390
K T R Y ++S G L E+ + + Q+ + + N ++ A+S G KA
Sbjct: 432 KSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSN-AIHNIMVEAYSKYGNEIKAE 490
Query: 391 EFHMLLLQK 399
+ +LQK
Sbjct: 491 DLRKEMLQK 499
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Query: 176 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235
AEE+ + + + L ++YN ++ Y G++E ++K +++ PD TYN I+
Sbjct: 174 AEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALIN 233
Query: 236 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
I + L EM D+G + + L++ Y
Sbjct: 234 GLCKAERITNAQDLLMEMQ-DNGVNPTVETFNTLIDAY 270
>gi|115455297|ref|NP_001051249.1| Os03g0746400 [Oryza sativa Japonica Group]
gi|113549720|dbj|BAF13163.1| Os03g0746400, partial [Oryza sativa Japonica Group]
Length = 613
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT L+H A T +A + F+++K+ ++ +A YN ++ + G++E VVEE+
Sbjct: 401 TYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEM 460
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFL---DEMSCDS 257
+ + P++ T+N IS+ + K L +E SC+
Sbjct: 461 RTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNP 502
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/213 (18%), Positives = 93/213 (43%), Gaps = 5/213 (2%)
Query: 74 NVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYA-TRID 132
+I + V G ++ + +++ L + R+ A++ M + V+ D+ +D
Sbjct: 246 GLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKM--DRFGVVKDTKAMNVLLD 303
Query: 133 LMTKVFGIHSGERYFEGLPLSAKTSE-TYTALLHLYAGAKWTEKAEELFERVKQSNLSFN 191
+ K + F+ L + E ++ L+H + A+ ++A + E +KQ S +
Sbjct: 304 TLCKERSVKRARGVFQELRGTIPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPS 363
Query: 192 ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 251
+ Y ++ Y + V +++E++++ P++ TY + + + + D
Sbjct: 364 VVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFD 423
Query: 252 EMSCDSGGSDDWVKYVNLVNIYITASHLVNAES 284
++ D G + D Y +L+ I A L +A S
Sbjct: 424 KLKED-GVAPDASFYNSLIYILGRAGRLEDAYS 455
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
++TYT L++ + AEE+F ++ ++ + Y ++ + +G ++K + + +
Sbjct: 592 AKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFD 651
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
E+ + + P++ YN+ + + I++ K+ LDEMS G + V Y +++ Y +
Sbjct: 652 EMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV-KGLHPNAVTYCTIIDGYCKS 710
Query: 277 SHLVNA 282
L A
Sbjct: 711 GDLAEA 716
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/268 (19%), Positives = 106/268 (39%), Gaps = 36/268 (13%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY ++ + + A + + + S N ++Y ++ ++ + V++E+
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K + + PDIF YN I + +D+ + FL EM ++G + Y ++ YI AS
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM-VENGLKPNAFTYGAFISGYIEASE 537
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFL-------------------------------II 307
+A+ E + + + + +
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 308 LYAGLGNKDKID---QIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
L GL DK+D +I++ +R +Y +++ + LG++++ I D+ +
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 365 TSDFDISACNRLLGAFSDVGLTEKANEF 392
+ ++ N LLG F G EKA E
Sbjct: 658 LTP-NVIIYNMLLGGFCRSGEIEKAKEL 684
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 125/324 (38%), Gaps = 44/324 (13%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSET--YTALLHLYAGAKWTEKAEELFERVK 184
Y I+ +K+ + F+ + T Y LL + + EKA+EL + +
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS 689
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCA------ 238
L NA+ Y ++ Y G + + + +E+K K +VPD F Y + C
Sbjct: 690 VKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVE 749
Query: 239 -----------------ATLN--IDQVKKF------------LDEMSCDSGGSDDWVKYV 267
A N I+ V KF L + S D G + V Y
Sbjct: 750 RAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTY- 808
Query: 268 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 327
N++ Y+ + A + + + ITY L+ Y +G + ++ ++
Sbjct: 809 NIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIA 868
Query: 328 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ-WKQSATSD---FDISACNRLLGAFSDV 383
+ Y I++++L G + ++DQ + ++A D IS C LL F+ V
Sbjct: 869 AGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKV 928
Query: 384 GLTEKANEFHMLLLQKNCAPTNAS 407
G E A + +++ P +A+
Sbjct: 929 GEMEVAEKVMENMVRLQYIPDSAT 952
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 53/268 (19%), Positives = 109/268 (40%), Gaps = 39/268 (14%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y L++ ++ +KA +F+ + + L+ N ++YN ++ + G++EK +++E+
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN------- 271
K + P+ TY I + ++ + + DEM D +V Y LV+
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFV-YTTLVDGCCRLND 747
Query: 272 ----IYITASHLVNAESSTL--------------VEAEKSITQRQW------------IT 301
I I ++ SST E + + R +T
Sbjct: 748 VERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVT 807
Query: 302 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 361
Y+ +I GN + +++ ++ T Y +L+ Y +G E+ + D+
Sbjct: 808 YNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDE-A 866
Query: 362 QSATSDFDISACNRLLGAFSDVGLTEKA 389
+A + D + ++ AF G+T KA
Sbjct: 867 IAAGIEPDHIMYSVIINAFLKEGMTTKA 894
Score = 41.2 bits (95), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 52/299 (17%), Positives = 117/299 (39%), Gaps = 17/299 (5%)
Query: 71 SATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATR 130
A N+++ ++ G + V ++K ++ R+ A+ + + M KE ++ +
Sbjct: 435 GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM---KEQGIAPDIFCYN 491
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKTSE--------TYTALLHLYAGAKWTEKAEELFER 182
+ + G+ +R E + E TY A + Y A A++ +
Sbjct: 492 ----SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKE 547
Query: 183 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 242
+++ + N ++ ++ Y G+V + + + ++ D TY + ++
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607
Query: 243 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 302
+D ++ EM G + D Y L+N + ++ A S E+ +T I Y
Sbjct: 608 VDDAEEIFREMR-GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTP-NVIIY 665
Query: 303 DFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 361
+ L+ + G +K ++ + + + Y I+ Y G L E + D+ K
Sbjct: 666 NMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 5/147 (3%)
Query: 174 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 233
EKA+ LF+ + S L A Y ++ Y V + ++ E+K++N+V +TY
Sbjct: 364 EKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTV 423
Query: 234 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 293
+ ++ ++D + EM SG + V Y L+ ++ S +A L E ++
Sbjct: 424 VKGMCSSGDLDGAYNIVKEMIA-SGCRPNVVIYTTLIKTFLQNSRFGDA-MRVLKEMKEQ 481
Query: 294 ITQRQWITYDFLIILYAGLGNKDKIDQ 320
Y+ LII GL ++D+
Sbjct: 482 GIAPDIFCYNSLII---GLSKAKRMDE 505
>gi|413926076|gb|AFW66008.1| hypothetical protein ZEAMMB73_411794 [Zea mays]
Length = 633
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 75/164 (45%), Gaps = 13/164 (7%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
+ ++L A+ T +A +L + + ++ + MYN + + + QV ++ + + ++
Sbjct: 393 FVSMLEALCNAEKTTEAIDLLHMMPEKGITTDVGMYNMIFSALGKLKQVSFMSSLYDTMR 452
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
VVPD+FTYN+ ISS +D+ + +EM D D V Y +++N
Sbjct: 453 ANGVVPDVFTYNIMISSFGRVGLVDKASELFEEME-DGSCKPDVVTYNSMINCL------ 505
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGL----GNKDKID 319
++ L EA Q YD + Y+ L G +K+D
Sbjct: 506 --GKNGDLDEAHMLFKDMQEKGYDPDVFTYSILIECFGKSNKVD 547
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 47/95 (49%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY ++ + +KA ELFE ++ + + + YN M+ G +++ ++ +++
Sbjct: 462 TYNIMISSFGRVGLVDKASELFEEMEDGSCKPDVVTYNSMINCLGKNGDLDEAHMLFKDM 521
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
+ K PD+FTY++ I + +D DEM
Sbjct: 522 QEKGYDPDVFTYSILIECFGKSNKVDMACSLFDEM 556
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 105/257 (40%), Gaps = 30/257 (11%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT L+ + A T K L E + N + YN ++ V++ ++ ++
Sbjct: 255 TYTILIRMSGKAGKTTKFVSLLEEMVSEGCVLNLIAYNTVIEALGKNKMVDEAIFMLSKM 314
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ P+ FTY++ + + + ++ + LD S G + Y L+ + H
Sbjct: 315 IESDCRPNQFTYSIMLDVLSTGGQLHRLNEILDICS----GCLNRPVYSYLIKALCKSGH 370
Query: 279 LVNAESSTLVEAEKSITQRQWIT------YDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 332
A S+ R W + Y F+ +L A L N +K + L M +K
Sbjct: 371 ASEAH---------SVFCRMWNSHEKGDRYAFVSMLEA-LCNAEKTTEAIDLLHMMPEKG 420
Query: 333 TSRN---YICILSSYLMLGHLKEV---GEIIDQWKQSATSDFDISACNRLLGAFSDVGLT 386
+ + Y I S+ LG LK+V + D + + D+ N ++ +F VGL
Sbjct: 421 ITTDVGMYNMIFSA---LGKLKQVSFMSSLYDTMRANGVVP-DVFTYNIMISSFGRVGLV 476
Query: 387 EKANEFHMLLLQKNCAP 403
+KA+E + +C P
Sbjct: 477 DKASELFEEMEDGSCKP 493
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 43/95 (45%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+ + ++ K E++E++++ + YN ++ G V++ V E++
Sbjct: 185 TYKCLVQAHLRSREVWKGFEVYEKMRRKGYKLDIFAYNMLLNALAKAGMVDQAYQVFEDM 244
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
K+ PD +TY + I + L+EM
Sbjct: 245 KQNYCDPDAYTYTILIRMSGKAGKTTKFVSLLEEM 279
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%)
Query: 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 217
E Y+ L+ A E A ELFE++ Q L + + YN M+ + VGQV+ ++ E+
Sbjct: 483 ENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEK 542
Query: 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
++ PDI YN + +++V K L +M
Sbjct: 543 MEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKM 578
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/329 (19%), Positives = 129/329 (39%), Gaps = 41/329 (12%)
Query: 111 SEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYA 168
S++ V K V++ Y+ ID + KV + FE + + +Y+ L+H +
Sbjct: 227 SQYGVNCKPGVIT---YSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFC 283
Query: 169 GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIF 228
A ++++ LF+ + + + + ++ ++ G+V + ++E + ++ +VP++
Sbjct: 284 CAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLI 343
Query: 229 TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT------ASHLVN- 281
TYN I +++ ++ M G D + Y L+N Y A +L N
Sbjct: 344 TYNSLIDGFCMVGDLNSARELFLSMP-SKGLEPDEISYTTLINGYCKTWKVKEAMNLYNE 402
Query: 282 -------AESSTLVEAEKSITQRQWI-----------TY------DFLIILYAGLGNKDK 317
+T K + Q+ + TY I GL D
Sbjct: 403 MLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDC 462
Query: 318 I---DQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 374
+ +++ L+ K+ NY C++ G L+ E+ ++ Q D+ N
Sbjct: 463 LFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQP-DVVTYN 521
Query: 375 RLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
++ F VG + AN + + C P
Sbjct: 522 IMIHGFCKVGQVDNANILFEKMEENGCTP 550
Score = 41.2 bits (95), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 68/138 (49%), Gaps = 13/138 (9%)
Query: 120 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAE 177
F L+ +Y+ ID + K + + FE L + TY ++H + + A
Sbjct: 478 FKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNAN 537
Query: 178 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 237
LFE+++++ + + + YN ++ + ++E+V ++ ++ +K+V P+ +SC
Sbjct: 538 ILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPN-------AASC 590
Query: 238 AATLNI----DQVKKFLD 251
+++ ++ KKF+D
Sbjct: 591 TIVVDMLCKDEKYKKFVD 608
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Query: 175 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 234
+A ELF +K N N Y+ ++ G++E + E++ ++ + PD+ TYN+ I
Sbjct: 465 EAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMI 524
Query: 235 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 270
+D ++M ++G + D + Y L+
Sbjct: 525 HGFCKVGQVDNANILFEKME-ENGCTPDIIAYNTLL 559
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 1/127 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY AL+ Y + A LF+++K L N L Y+ ++ Y G + + E
Sbjct: 447 TYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEF 506
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
KR + PD+ Y+ I SC ++ L EM+ +G + V Y +L++ Y
Sbjct: 507 KRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMT-QAGIQPNIVTYNSLIDAYGRNGQ 565
Query: 279 LVNAESS 285
+ N E++
Sbjct: 566 VDNVEAA 572
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/379 (18%), Positives = 147/379 (38%), Gaps = 48/379 (12%)
Query: 66 SLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDS 125
S+ S ++++W + + + ++L+EL ++ AL+ EWMV S
Sbjct: 142 SMSGNSTALLLEKWSHQ--LVGLEDFPYLLRELGNRGEWERALQGYEWMVQQGHL---RS 196
Query: 126 DYATRIDLMTKVFG-IHSGERYFEGLPLSAKTS-----ETYTALLHLYAGAKWTEKAEEL 179
+++ +M G + E + + K Y+A++ Y + +A ++
Sbjct: 197 EWSKLASIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKV 256
Query: 180 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL-VVEEIKRKNVVPDIFTYNLWISSCA 238
F+ +K++ N + YN ++ G K AL + EE++++ V PD T+N I+ C+
Sbjct: 257 FQAMKKAGCKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCS 316
Query: 239 ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES-------------- 284
+ ++ EM G D Y L++ + A S
Sbjct: 317 RGSLWEDSQRVFAEMQ-RRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNV 375
Query: 285 ---STLVEA-----------------EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS 324
ST+++ ++S + ++Y+ LI +YA LG D K
Sbjct: 376 VTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKD 435
Query: 325 LRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 384
+ K Y ++ +Y G K+ + D+ K ++ + L+ A+S G
Sbjct: 436 MERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVP-NVLTYSALIDAYSKAG 494
Query: 385 LTEKANEFHMLLLQKNCAP 403
+ + A + + P
Sbjct: 495 MHQDATSIFVEFKRAGLKP 513
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/241 (19%), Positives = 105/241 (43%), Gaps = 7/241 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+ +L+ + + E ++ +F +++ + + YN ++ GQ+E A ++ +
Sbjct: 307 TFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSM 366
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ KN+ P++ TY+ I ++ +M +SG D V Y L++IY
Sbjct: 367 RLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMK-ESGVRPDRVSYNTLIDIYAKLGR 425
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+A ++ + E+ + +TY+ LI Y G ++ ++ Y
Sbjct: 426 FDDALTAC-KDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYS 484
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
++ +Y G ++ I ++K++ D+ + L+ + GL E A ++LLQ
Sbjct: 485 ALIDAYSKAGMHQDATSIFVEFKRAGLKP-DVVLYSSLIDSCCKCGLVEDA----VVLLQ 539
Query: 399 K 399
+
Sbjct: 540 E 540
>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
Length = 871
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 121/275 (44%), Gaps = 45/275 (16%)
Query: 169 GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIF 228
G+ W + +F+ + SNL+FNA++ + VG+ ++ + + PD+
Sbjct: 229 GSVWKLFKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGES-----LLHLMPKFMCSPDVV 283
Query: 229 TYNLWISSCA------------------------ATL-----------NIDQVKKFLDEM 253
T+N+ I++C AT N+ + +K D +
Sbjct: 284 TFNILINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGI 343
Query: 254 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGL 312
D G + + Y L++ Y A + A++S L E ++ +T++ L+ +
Sbjct: 344 Q-DMGIAPNAAIYNTLMDGYFKAREV--AQASLLYEEMRTTGVSPDCVTFNILVWGHYKY 400
Query: 313 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA 372
G + D++ K L ++ + S Y ++SS G L E +++ + + + + A
Sbjct: 401 GRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLT-LSVVA 459
Query: 373 CNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
N L+GA+S GL +KA E + ++++ P++++
Sbjct: 460 FNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSST 494
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 42/76 (55%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+T +LH +A +LF+ ++ ++ NA +YN +M Y +V + +L+ EE+
Sbjct: 319 TFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEM 378
Query: 219 KRKNVVPDIFTYNLWI 234
+ V PD T+N+ +
Sbjct: 379 RTTGVSPDCVTFNILV 394
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/100 (21%), Positives = 43/100 (43%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
+S T +LL W ++A L R+ + N + Y ++ Y + +E +
Sbjct: 490 PSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFL 549
Query: 215 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 254
+E+K + + PD + I + N+++ + EMS
Sbjct: 550 WKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMS 589
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
++TYT L++ + AEE+F ++ ++ + Y ++ + +G ++K + + +
Sbjct: 592 AKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFD 651
Query: 217 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276
E+ + + P++ YN+ + + I++ K+ LDEMS G + V Y +++ Y +
Sbjct: 652 EMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV-KGLHPNAVTYCTIIDGYCKS 710
Query: 277 SHLVNA 282
L A
Sbjct: 711 GDLAEA 716
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/268 (19%), Positives = 106/268 (39%), Gaps = 36/268 (13%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY ++ + + A + + + S N ++Y ++ ++ + V++E+
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K + + PDIF YN I + +D+ + FL EM ++G + Y ++ YI AS
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM-VENGLKPNAFTYGAFISGYIEASE 537
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFL-------------------------------II 307
+A+ E + + + + +
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 308 LYAGLGNKDKID---QIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
L GL DK+D +I++ +R +Y +++ + LG++++ I D+ +
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 365 TSDFDISACNRLLGAFSDVGLTEKANEF 392
+ ++ N LLG F G EKA E
Sbjct: 658 LTP-NVIIYNMLLGGFCRSGEIEKAKEL 684
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 125/324 (38%), Gaps = 44/324 (13%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSET--YTALLHLYAGAKWTEKAEELFERVK 184
Y I+ +K+ + F+ + T Y LL + + EKA+EL + +
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS 689
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCA------ 238
L NA+ Y ++ Y G + + + +E+K K +VPD F Y + C
Sbjct: 690 VKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVE 749
Query: 239 -----------------ATLN--IDQVKKF------------LDEMSCDSGGSDDWVKYV 267
A N I+ V KF L + S D G + V Y
Sbjct: 750 RAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTY- 808
Query: 268 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 327
N++ Y+ + A + + + ITY L+ Y +G + ++ ++
Sbjct: 809 NIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIA 868
Query: 328 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ-WKQSATSD---FDISACNRLLGAFSDV 383
+ Y I++++L G + ++DQ + ++A D IS C LL F+ V
Sbjct: 869 AGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKV 928
Query: 384 GLTEKANEFHMLLLQKNCAPTNAS 407
G E A + +++ P +A+
Sbjct: 929 GEMEVAEKVMENMVRLQYIPDSAT 952
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 53/268 (19%), Positives = 109/268 (40%), Gaps = 39/268 (14%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y L++ ++ +KA +F+ + + L+ N ++YN ++ + G++EK +++E+
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN------- 271
K + P+ TY I + ++ + + DEM D +V Y LV+
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFV-YTTLVDGCCRLND 747
Query: 272 ----IYITASHLVNAESSTL--------------VEAEKSITQRQW------------IT 301
I I ++ SST E + + R +T
Sbjct: 748 VERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVT 807
Query: 302 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 361
Y+ +I GN + +++ ++ T Y +L+ Y +G E+ + D+
Sbjct: 808 YNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDE-A 866
Query: 362 QSATSDFDISACNRLLGAFSDVGLTEKA 389
+A + D + ++ AF G+T KA
Sbjct: 867 IAAGIEPDHIMYSVIINAFLKEGMTTKA 894
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 52/299 (17%), Positives = 117/299 (39%), Gaps = 17/299 (5%)
Query: 71 SATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATR 130
A N+++ ++ G + V ++K ++ R+ A+ + + M KE ++ +
Sbjct: 435 GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM---KEQGIAPDIFCYN 491
Query: 131 IDLMTKVFGIHSGERYFEGLPLSAKTSE--------TYTALLHLYAGAKWTEKAEELFER 182
+ + G+ +R E + E TY A + Y A A++ +
Sbjct: 492 ----SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKE 547
Query: 183 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 242
+++ + N ++ ++ Y G+V + + + ++ D TY + ++
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607
Query: 243 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 302
+D ++ EM G + D Y L+N + ++ A S E+ +T I Y
Sbjct: 608 VDDAEEIFREMR-GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTP-NVIIY 665
Query: 303 DFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 361
+ L+ + G +K ++ + + + Y I+ Y G L E + D+ K
Sbjct: 666 NMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 5/147 (3%)
Query: 174 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 233
EKA+ LF+ + S L A Y ++ Y V + ++ E+K++N+V +TY
Sbjct: 364 EKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTV 423
Query: 234 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 293
+ ++ ++D + EM SG + V Y L+ ++ S +A L E ++
Sbjct: 424 VKGMCSSGDLDGAYNIVKEMIA-SGCRPNVVIYTTLIKTFLQNSRFGDA-MRVLKEMKEQ 481
Query: 294 ITQRQWITYDFLIILYAGLGNKDKIDQ 320
Y+ LII GL ++D+
Sbjct: 482 GIAPDIFCYNSLII---GLSKAKRMDE 505
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 62/115 (53%), Gaps = 1/115 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT+L+++ ++A+ LF +++Q L + +++N ++ + + G +++ +++E+
Sbjct: 428 TYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEM 487
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
V+PD TYN + +++ ++ LDEM G D + Y L++ Y
Sbjct: 488 DNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMK-RRGIKPDHISYNTLISGY 541
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/202 (18%), Positives = 84/202 (41%), Gaps = 2/202 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+ ++++ +KA+E ++ + N + YN ++ + G+ ++ ++ + +
Sbjct: 218 TFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTM 277
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K K + PD +TYN +IS +++ + +M + G + V Y L++ Y
Sbjct: 278 KDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKM-LEGGLVPNAVTYNALIDGYCNKGD 336
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L A + K I +TY+ I G D + K +R + +
Sbjct: 337 LDKAYAYRDEMISKGIMA-SLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHN 395
Query: 339 CILSSYLMLGHLKEVGEIIDQW 360
+++ Y G K ++D+
Sbjct: 396 ILINGYCRCGDAKRAFGLLDEM 417
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 51/102 (50%)
Query: 152 LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 211
+ AKT+ + L+ Y K +A E F +K+ N N+M++L++ + + +
Sbjct: 141 VDAKTTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMA 200
Query: 212 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
++ E+ R N+ ++T+N+ I+ + + K+F+ M
Sbjct: 201 WVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHM 242
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 44/104 (42%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+ Y E+A +L + +K+ + + + YN +++ Y G ++ V +E+
Sbjct: 498 TYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEM 557
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 262
P I TYN I + ++ L EM DD
Sbjct: 558 MTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDD 601
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/185 (20%), Positives = 79/185 (42%), Gaps = 7/185 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY ++H + ++A +F+ +K L + YN ++ G++E+ + ++ ++
Sbjct: 253 TYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKM 312
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+VP+ TYN I ++D+ + DEM G V Y ++
Sbjct: 313 LEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEM-ISKGIMASLVTYNLFIHALFMEGR 371
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKI-----DQIWKSLRMTKQKMT 333
+ +A++ EK + +T++ LI Y G+ + + + K ++ T T
Sbjct: 372 MGDADNMIKEMREKGMMP-DAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYT 430
Query: 334 SRNYI 338
S Y+
Sbjct: 431 SLIYV 435
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 8/203 (3%)
Query: 168 AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 227
G +KA +L + + + + Y++++T +VEK L+ +E+K V PD+
Sbjct: 199 CGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDV 258
Query: 228 FTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES-- 284
+TY + I S C A L I+Q + +EM G S V Y L++ Y+ A + A
Sbjct: 259 YTYTILIDSFCKAGL-IEQAQWLFEEMR-SVGCSPTVVTYTALIHAYLKAKQVPQANDIF 316
Query: 285 STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY 344
+V+A + +TY L+ GN K +++ L T S Y +
Sbjct: 317 HRMVDAG---CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRH 373
Query: 345 LMLGHLKEVGEIIDQWKQSATSD 367
+ ++ G ++D ++ D
Sbjct: 374 TLAPNVVTYGALVDGLCKAHKVD 396
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 128/321 (39%), Gaps = 26/321 (8%)
Query: 103 RYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TY 160
++ A ++ + M+ K FV S Y+ I + + F+ + + T + TY
Sbjct: 203 KFDKAFQLIKEMM-RKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTY 261
Query: 161 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 220
T L+ + A E+A+ LFE ++ S + Y ++ Y+ QV + + +
Sbjct: 262 TILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVD 321
Query: 221 KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM--SCDSGGSDDW-------------VK 265
P+ TY + NI + + ++ + DS SD + V
Sbjct: 322 AGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVT 381
Query: 266 YVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 325
Y LV+ + +H V+ L S + I YD LI + G D +++ L
Sbjct: 382 YGALVD-GLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF--L 438
Query: 326 RMTKQKM--TSRNYICILSSYLMLGHLKEVGEIIDQW-KQSATSDFDISACNRLLGAFSD 382
+MTK + Y ++ G L +++ Q K S T ++ ++
Sbjct: 439 QMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTP--NVVTYTAMIDGLCR 496
Query: 383 VGLTEKANEFHMLLLQKNCAP 403
+G +EKA + L+ +K C+P
Sbjct: 497 IGESEKALKLLSLMEEKGCSP 517
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYTA++ +EKA +L +++ S N + Y ++ G+++ + ++
Sbjct: 486 TYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQM 545
Query: 219 KRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268
RK P+ TY + I+ CAA L +D+ + L EM W KY+
Sbjct: 546 SRKGCSPNYVTYRVLINHLCAAGL-LDKARLLLGEMK-----QTYWPKYLQ 590
>gi|297610666|ref|NP_001064867.2| Os10g0479200 [Oryza sativa Japonica Group]
gi|255679497|dbj|BAF26781.2| Os10g0479200 [Oryza sativa Japonica Group]
Length = 818
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 85/183 (46%), Gaps = 3/183 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T++ L+H E+A +LFERV + + + YN ++ Y +G +++ +++ +
Sbjct: 291 TFSTLIHGLCKVGSMEEALDLFERVTKEGMELEIVTYNSLINGYRLLGLTKEIPKIIQMM 350
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + V PD+ TY + I+ + ++++ K ++ D G + V Y L+N
Sbjct: 351 RGQGVEPDLVTYTILIAGHCESGDVEEGMKVRKDV-LDQGLQLNIVTYSVLLNALFKKGM 409
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM-TSRNY 337
+ + L E I Y LI Y LG +K Q+ ++ +++ M TS N+
Sbjct: 410 FCEID-NLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQVCNAMCSSQRVMPTSLNH 468
Query: 338 ICI 340
I
Sbjct: 469 FSI 471
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 111/257 (43%), Gaps = 11/257 (4%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVK 184
Y ID K+ I + R ++ + ++ T T +LL+ Y + AE F ++
Sbjct: 503 YNVVIDGYAKLGDIVNAVRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYFRAIQ 562
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
S L A+ Y +M G+V + + +E+ K + + TY++ + L D
Sbjct: 563 LSGLLPTAVTYTTLMDALSEAGEVNTMLSLFDEMVAKRIKANAVTYSVIVKGLCKQLRFD 622
Query: 245 QVKKFLDEMSCDSGGSD-DWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 303
+ L +M DS G + D + Y L+ + + ++ A + + + +TY+
Sbjct: 623 EAINVLKDM--DSKGINADPITYNTLIQGFCESENVQMAFHIHDIMLCRGLVPTP-VTYN 679
Query: 304 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGH----LKEVGEIIDQ 359
LI + G + + + +SLR K+ Y ++ + G + VG+++D
Sbjct: 680 LLINVLCLKGKVIQAEILLESLRENGIKLRKFAYTTLIKAQCAKGMPINAVLLVGKLLDA 739
Query: 360 WKQSATSDFDISACNRL 376
+++ DF +A NRL
Sbjct: 740 GFEASIEDFS-AAINRL 755
>gi|110289270|gb|ABG66143.1| expressed protein [Oryza sativa Japonica Group]
gi|125575153|gb|EAZ16437.1| hypothetical protein OsJ_31906 [Oryza sativa Japonica Group]
Length = 829
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 85/183 (46%), Gaps = 3/183 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T++ L+H E+A +LFERV + + + YN ++ Y +G +++ +++ +
Sbjct: 309 TFSTLIHGLCKVGSMEEALDLFERVTKEGMELEIVTYNSLINGYRLLGLTKEIPKIIQMM 368
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + V PD+ TY + I+ + ++++ K ++ D G + V Y L+N
Sbjct: 369 RGQGVEPDLVTYTILIAGHCESGDVEEGMKVRKDV-LDQGLQLNIVTYSVLLNALFKKGM 427
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM-TSRNY 337
+ + L E I Y LI Y LG +K Q+ ++ +++ M TS N+
Sbjct: 428 FCEID-NLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQVCNAMCSSQRVMPTSLNH 486
Query: 338 ICI 340
I
Sbjct: 487 FSI 489
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 111/257 (43%), Gaps = 11/257 (4%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVK 184
Y ID K+ I + R ++ + ++ T T +LL+ Y + AE F ++
Sbjct: 521 YNVVIDGYAKLGDIVNAVRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYFRAIQ 580
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
S L A+ Y +M G+V + + +E+ K + + TY++ + L D
Sbjct: 581 LSGLLPTAVTYTTLMDALSEAGEVNTMLSLFDEMVAKRIKANAVTYSVIVKGLCKQLRFD 640
Query: 245 QVKKFLDEMSCDSGGSD-DWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 303
+ L +M DS G + D + Y L+ + + ++ A + + + +TY+
Sbjct: 641 EAINVLKDM--DSKGINADPITYNTLIQGFCESENVQMAFHIHDIMLCRGLVPTP-VTYN 697
Query: 304 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGH----LKEVGEIIDQ 359
LI + G + + + +SLR K+ Y ++ + G + VG+++D
Sbjct: 698 LLINVLCLKGKVIQAEILLESLRENGIKLRKFAYTTLIKAQCAKGMPINAVLLVGKLLDA 757
Query: 360 WKQSATSDFDISACNRL 376
+++ DF +A NRL
Sbjct: 758 GFEASIEDFS-AAINRL 773
>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Glycine max]
Length = 836
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 12/180 (6%)
Query: 130 RIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLS 189
RI +T+ F + + LP T TY++L+H ++A+E+FE ++ L
Sbjct: 653 RIGNVTEAFKLRDAMKSRGILP----TCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLL 708
Query: 190 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 249
N Y ++ + +GQ++ V ++ E+ + P+ TY + I N+ + ++
Sbjct: 709 PNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEAREL 768
Query: 250 LDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS---ITQRQWITYDFLI 306
L+EM +G + D V Y L Y L + TL KS + + ITY+ LI
Sbjct: 769 LNEM-IRNGIAPDTVTYNALQKGYCKEREL----TVTLQSDHKSNIGLPLEEEITYNTLI 823
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 70/156 (44%), Gaps = 2/156 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY LL Y A E A + F+ + + ++++YN ++ Y +G V + + + +
Sbjct: 608 TYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAM 667
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K + ++P TY+ I +D+ K+ +EM + G + Y L+ +
Sbjct: 668 KSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMR-NEGLLPNVFCYTALIGGHCKLGQ 726
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 314
+ + S L+E + + ITY +I Y LGN
Sbjct: 727 M-DIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGN 761
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 93/215 (43%), Gaps = 10/215 (4%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQ---SNLSFNALMYNEMMTLYMSVGQVEK 210
A + T ALLH G EE+FE +KQ L + + YN ++ G++E+
Sbjct: 498 AANTVTSNALLH---GLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEE 554
Query: 211 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 270
+ EE+ ++ PD +TYN + A ID V + L E + G + Y L+
Sbjct: 555 AFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAK-EYGFVPNVYTYALLL 613
Query: 271 NIYITASHLVNA-ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329
Y A + +A + ++ EK + + Y+ LI Y +GN + ++ +++
Sbjct: 614 EGYCKADRIEDAVKFFKNLDYEK--VELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRG 671
Query: 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
T Y ++ +G + E EI ++ +
Sbjct: 672 ILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEG 706
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 71/165 (43%), Gaps = 3/165 (1%)
Query: 120 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAK--TSETYTALLHLYAGAKWTEKAE 177
FV + YA ++ K I ++F+ L +S Y L+ Y +A
Sbjct: 602 FVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAF 661
Query: 178 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 237
+L + +K + Y+ ++ +G+V++ + EE++ + ++P++F Y I
Sbjct: 662 KLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGH 721
Query: 238 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 282
+D V L EMS +G + + Y +++ Y ++ A
Sbjct: 722 CKLGQMDIVGSILLEMS-SNGIRPNKITYTIMIDGYCKLGNMKEA 765
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 106/244 (43%), Gaps = 20/244 (8%)
Query: 149 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 208
GL L + T+L+ +YA KA+ +F+++ + N+ + + ++ Y GQV
Sbjct: 227 GLELEPRVG---TSLVGMYAKCGDISKAQVIFDKLPEKNV----VTWTLLIAGYAQQGQV 279
Query: 209 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268
+ ++E++++ V P+ TY + C L ++ KK + G + WV
Sbjct: 280 DVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWV---- 335
Query: 269 LVNIYITASHLVNAESSTLVEAEK---SITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 325
VN IT + + L EA K + R +T+ ++ YA LG D+ +++ +
Sbjct: 336 -VNALIT----MYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRM 390
Query: 326 RMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGL 385
+ K + L+S L+E G+ I Q A D+ + L+ ++ G
Sbjct: 391 QQQGIKPDKMTFTSALTSCSSPAFLQE-GKSIHQQLVHAGYSLDVYLQSALVSMYAKCGS 449
Query: 386 TEKA 389
+ A
Sbjct: 450 MDDA 453
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 58/127 (45%), Gaps = 4/127 (3%)
Query: 161 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 220
+AL+ +YA + A +F ++ + N+ + + M+T G+ + E++K+
Sbjct: 438 SALVSMYAKCGSMDDARLVFNQMSERNV----VAWTAMITGCAQHGRCREALEYFEQMKK 493
Query: 221 KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLV 280
+ + PD T+ +S+C +++ +K M D G Y V++ A HL
Sbjct: 494 QGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLE 553
Query: 281 NAESSTL 287
AE+ L
Sbjct: 554 EAENVIL 560
>gi|255581238|ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528950|gb|EEF30943.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 737
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/256 (17%), Positives = 105/256 (41%), Gaps = 6/256 (2%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
A+ E + ++ Y+ A A ++ ++++ + N L+ N + + + ++EK
Sbjct: 168 ARRPEAFAHVMVSYSRAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKALR 227
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273
+E ++ + P++ TYN I ++ + + EM G D V Y ++
Sbjct: 228 FLERMQLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMP-FKGCPPDKVSYYTVMGFL 286
Query: 274 ITASHL--VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 331
+ V +V+ K + +TY+ L+ + + G+ D+ + + +
Sbjct: 287 CQDKRIKEVRNLMEKMVKDNKLFPDQ--VTYNTLVHMLSKHGHADEALEFLRETEERGFQ 344
Query: 332 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 391
+ Y I++S+ M G + EI+++ S D+ ++ VG E+A +
Sbjct: 345 VDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSP-DVVTYTAVVNGLCKVGKVEEAKK 403
Query: 392 FHMLLLQKNCAPTNAS 407
+ + C P S
Sbjct: 404 MLQQMYKHGCKPNTVS 419
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 24/113 (21%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L+H+ + ++A E ++ + + Y+ ++ + G++++ +V E+
Sbjct: 314 TYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEM 373
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
K PD+ TY ++ +++ KK L +M G + V Y L+N
Sbjct: 374 ITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMY-KHGCKPNTVSYTALLN 425
>gi|357519615|ref|XP_003630096.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524118|gb|AET04572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 635
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/304 (20%), Positives = 127/304 (41%), Gaps = 10/304 (3%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGL--- 150
+ +EL K ++ LE+ WM + ++ + Y+ I +M K I F +
Sbjct: 87 LFEELGKHDKWLQCLEVFRWMQRQRWYIADNGVYSKLISVMGKKGQIRLAMWLFSEMRNT 146
Query: 151 ---PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQS-NLSFNALMYNEMMTLYMSVG 206
P ++ + +A LH +K KA FE++K + N + YN ++ +
Sbjct: 147 GCRPDTSVYNSLISAHLHSRDKSKALVKALGYFEKMKTTERCKPNIVTYNILLRAFAQAR 206
Query: 207 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 266
V +V + +++ +V PDI+T+N + I +++ L M + D + Y
Sbjct: 207 DVNQVNYLFKDLDESSVSPDIYTFNGVMDGYGKNGMIREMESVLVRMKSNQVKL-DLITY 265
Query: 267 VNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 326
L++ Y E +S + T++ +I+ Y KDK + +++++
Sbjct: 266 NLLIDSYGKKQQFDKME-QVFKSLSRSKEKPTLPTFNSMILNYGKARLKDKAENVFQNMT 324
Query: 327 MTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLT 386
+ + ++ Y + G + E+ DQ +S +S N +L + GL
Sbjct: 325 DMGYTPSFVTHESLIHMYGLCGCVSNAVELFDQLIESKVP-IKVSTLNAMLDVYCINGLQ 383
Query: 387 EKAN 390
++A+
Sbjct: 384 QEAD 387
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 44/99 (44%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+ +L+H+Y A ELF+++ +S + N M+ +Y G ++ +
Sbjct: 334 THESLIHMYGLCGCVSNAVELFDQLIESKVPIKVSTLNAMLDVYCINGLQQEADSLFTRA 393
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 257
K + PD TY L + + + + K L +M DS
Sbjct: 394 KSIKIFPDATTYKLLYKAYTKANSKELLDKLLKQMDKDS 432
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 105/248 (42%), Gaps = 9/248 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+T L+ +A+++ E + + L YN +M VGQ+E + E +
Sbjct: 253 TFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESL 312
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + ++F+YN+ I+ ID+ + +EM G V Y L+ +
Sbjct: 313 ADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMR-PKGLKPSTVTYNTLIGALCQSGR 371
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGL---GNKDKIDQIWKSLRMTKQKMTSR 335
+ A+ VE + T Q++ +L GL G+ ++ +++S++ T+ K
Sbjct: 372 VRTAQ-KLFVEMQ---TCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIE 427
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 395
+ +L G L+E + D+ ++ D A N L+ + G+ +A +
Sbjct: 428 VFSILLDGMCRAGKLEEAWKQFDEISKNGLEP-DTIAYNILINGLCNKGMLSEAVKLLWQ 486
Query: 396 LLQKNCAP 403
+ +K C P
Sbjct: 487 MEEKGCLP 494
>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
Length = 676
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 126/341 (36%), Gaps = 7/341 (2%)
Query: 70 RSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYAT 129
R + R V GN V + L K K A + E MV K + + +
Sbjct: 233 RDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVG-KGLKPNVYTHTS 291
Query: 130 RIDLMTKVFGIHSGERYFEGLPLSA---KTSETYTALLHLYAGAKWTEKAEELFERVKQS 186
ID + K+ R F L S+ TYT ++ Y +AE L R+ +
Sbjct: 292 LIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQ 351
Query: 187 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 246
L+ N Y ++ + G ++ ++ ++K + +P+I+TYN I I Q
Sbjct: 352 GLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQA 411
Query: 247 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI 306
K L M+ G D V Y L+ + H+ A AE S TY +I
Sbjct: 412 YKVL-RMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENS-CHPDIDTYTTII 469
Query: 307 ILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATS 366
+Y ++ Q++ T + Y +++ Y +G ++ ++ Q
Sbjct: 470 AMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCL 529
Query: 367 DFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
I+ L+ E+A +L K+ P + +
Sbjct: 530 PDPITY-GALISGLCKESRLEEARALFETMLDKHMVPCDVT 569
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 14/187 (7%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE---TYTALLH-LYAGAKWTEKAEELFER 182
Y T I ++ K + RYFE + + + S Y +L+H L KW +KA+EL
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQM-IDERLSPGNIVYNSLIHSLCIFDKW-DKAKELILE 469
Query: 183 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 242
+ + + + +N ++ + G+V + + + + R V PDI TY+ I
Sbjct: 470 MLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGK 529
Query: 243 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV---EAEKSITQRQW 299
+D+ K L M G D V Y L+N Y S + +A LV E E S
Sbjct: 530 MDEATKLLASM-VSVGMKPDCVTYNTLINGYCKISRMEDA----LVLFREMESSGVSPDI 584
Query: 300 ITYDFLI 306
ITY+ ++
Sbjct: 585 ITYNIIL 591
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 103/260 (39%), Gaps = 15/260 (5%)
Query: 75 VIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDS-DYATRIDL 133
V++R G V +LK L R + ALE+ + M D Y T I+
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Query: 134 ------MTKVFGIHSGERYFEG-LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQS 186
+ K +G + E G LP TY++++ A+ +KA E+ + ++
Sbjct: 209 FFKEGDLDKAYGTYH-EMLDRGILP----NVVTYSSIIAALCKAQAMDKAMEVLTSMVKN 263
Query: 187 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 246
+ N YN ++ Y S GQ ++ ++++ V PD+ TYN + +
Sbjct: 264 GVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEA 323
Query: 247 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI 306
+K D M+ G + Y L+ Y T LV + I ++ + LI
Sbjct: 324 RKMFDSMT-KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV-FSILI 381
Query: 307 ILYAGLGNKDKIDQIWKSLR 326
YA G D+ ++ +R
Sbjct: 382 CAYAKQGKVDQAMLVFSKMR 401
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 148/341 (43%), Gaps = 34/341 (9%)
Query: 63 FRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMV--THKEF 120
F++SL A +++ + + G + + ++ + R A+ + + MV +K
Sbjct: 134 FQVSL----ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPD 189
Query: 121 VLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLH-LYAGAKWTEKAE 177
+++ Y ID + K ++ +F+ + TYTAL++ L ++W++ A
Sbjct: 190 IVA---YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 246
Query: 178 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 237
L + +K+ ++ N + Y+ ++ ++ G+V + + EE+ R ++ PDI TY+ I+
Sbjct: 247 LLSDMIKK-KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Query: 238 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 297
ID+ + D M G D V Y L+N + A + + ++ + ++QR
Sbjct: 306 CLHDRIDEANQMFDLMV-SKGCLADVVSYNTLINGFCKAKRVEDG-----MKLFREMSQR 359
Query: 298 QW----ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 353
+TY+ LI + G+ DK + + + Y ++LG L +
Sbjct: 360 GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTY------NILLGGLCDN 413
Query: 354 GE-----IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
GE +I + Q D DI ++ G E+A
Sbjct: 414 GELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEA 454
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 69/167 (41%), Gaps = 3/167 (1%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
A + VS+G A V ++ K++R + +++ M + + V + Y T I
Sbjct: 314 ANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM-SQRGLVSNTVTYNTLI 372
Query: 132 DLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLS 189
+ + + +F + + + TY LL EKA +FE +++ +
Sbjct: 373 QGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMD 432
Query: 190 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 236
+ + Y ++ G+VE+ + + K + PDI TY +S
Sbjct: 433 LDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSG 479
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/361 (20%), Positives = 147/361 (40%), Gaps = 26/361 (7%)
Query: 44 CLDEETSNSDGKDDLKSRIFRIS-LPKRSATNVIQRWVSEGNQATVS-ELRHILKELRKS 101
C D+ TS D D + R+ + +P + N++ + + + N++ + EL H++ + R
Sbjct: 133 CADKRTS--DAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGG 190
Query: 102 QRYKHALEISEWMVTHKEFVLSDSD--YATRIDLMTKVFGIHSGERYFEGLPLSAKTSET 159
+S V + F DSD Y+T +++ + GI LP T
Sbjct: 191 GSPPDV--VSYTTVINGFFKEGDSDKAYSTYHEMLDR--GI---------LP----DVVT 233
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
Y +++ A+ +KA E+ + ++ + + + YN ++ Y S GQ ++ +++++
Sbjct: 234 YNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMR 293
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279
V PD+ TY+L + + +K D M+ G + Y L+ Y T L
Sbjct: 294 SDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMT-KRGLKPEITTYGTLLQGYATKGAL 352
Query: 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 339
V + I ++ + LI YA G D+ ++ +R + Y
Sbjct: 353 VEMHGLLDLMVRNGIHPDHYV-FSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGA 411
Query: 340 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 399
++ G +++ +Q S +I N L+ E+A E + +L +
Sbjct: 412 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNI-VYNSLIHGLCTCNKWERAEELILEMLDR 470
Query: 400 N 400
Sbjct: 471 G 471
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 80/186 (43%), Gaps = 12/186 (6%)
Query: 127 YATRIDLMTKVFGIHSGERYFE-----GLPLSAKTSETYTALLH-LYAGAKWTEKAEELF 180
Y I ++ K + YFE GL + + Y +L+H L KW E+AEEL
Sbjct: 409 YGAVIGILCKSGRVEDAMLYFEQMIDEGL---SPGNIVYNSLIHGLCTCNKW-ERAEELI 464
Query: 181 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 240
+ + N + +N ++ + G+V + + E + R V P++ TYN I+
Sbjct: 465 LEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLA 524
Query: 241 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI 300
+D+ K L M G + V Y L+N Y S + +A E E S I
Sbjct: 525 GKMDEAMKLLSGM-VSVGLKPNTVTYSTLINGYCKISRMEDA-LVLFKEMESSGVSPDII 582
Query: 301 TYDFLI 306
TY+ ++
Sbjct: 583 TYNIIL 588
>gi|242061252|ref|XP_002451915.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
gi|241931746|gb|EES04891.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
Length = 571
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 6/173 (3%)
Query: 151 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 210
P+ T + ++ + AK KA +F ++K A YN M+ + M GQ EK
Sbjct: 153 PICVVTPTELSEVVRMLGNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYEK 212
Query: 211 VALVVEEIKRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 269
V + E+ + + PD TY+ IS+ D + L+EM D+G Y L
Sbjct: 213 VHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSAIQLLNEMK-DNGMQPTTKIYTML 271
Query: 270 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 322
V ++ + V+ S E + TY LI GLG +ID+ +
Sbjct: 272 VALFFKLND-VHGALSLFEEMRHQYCRPDVFTYTELI---RGLGKAGRIDEAY 320
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY+AL+ + + A +L +K + + +Y ++ L+ + V + EE+
Sbjct: 232 TYSALISAFCKLGRRDSAIQLLNEMKDNGMQPTTKIYTMLVALFFKLNDVHGALSLFEEM 291
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + PD+FTY I ID+ F EM G D + N++N A
Sbjct: 292 RHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQ-REGCRPDTIVMNNMINFLGKAGR 350
Query: 279 LVNA 282
L +A
Sbjct: 351 LDDA 354
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 13/185 (7%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSD--YATRIDLMTKVFGIHSGERYFE--- 148
I+K L +S+ A E+ W KE +S S Y+ ID K + E
Sbjct: 376 IIKALFESK--SRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMD 433
Query: 149 --GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 206
G P Y +L+ AK + A ELF+ +K++ S ++ +Y M+ G
Sbjct: 434 EKGFP---PCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSSRVYAVMIKHLGKAG 490
Query: 207 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 266
+++ + +E+ + PD++ YN +S A T +D+ + M + G D Y
Sbjct: 491 RLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQ-EHGCIPDINSY 549
Query: 267 VNLVN 271
++N
Sbjct: 550 NIILN 554
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 81/183 (44%), Gaps = 10/183 (5%)
Query: 180 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 239
FER+K+S +S ++ Y+ ++ + ++EK +++EE+ K P Y I +
Sbjct: 394 FERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGK 453
Query: 240 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 299
D + E+ + G S V Y ++ A L +A + E K
Sbjct: 454 AKRYDLACELFQELKENCGSSSSRV-YAVMIKHLGKAGRLDDA-INMFDEMNKLGCAPDV 511
Query: 300 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY-LMLGHLKEVGEIID 358
Y+ L+ +GL +D+ ++R +M I ++SY ++L L++ ++I
Sbjct: 512 YAYNALM---SGLARTGMLDEALSTMR----RMQEHGCIPDINSYNIILNGLQKQEDLIV 564
Query: 359 QWK 361
QW+
Sbjct: 565 QWR 567
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 53/283 (18%), Positives = 111/283 (39%), Gaps = 12/283 (4%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVK 184
Y + L K+ +H FE + + TYT L+ A ++A F ++
Sbjct: 268 YTMLVALFFKLNDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQ 327
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC-AATLNI 243
+ + ++ N M+ G+++ + +E+ +P + TYN I + +
Sbjct: 328 REGCRPDTIVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRA 387
Query: 244 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 303
+V + + M +SG S Y L++ + + + A L E ++ Y
Sbjct: 388 SEVPSWFERMK-ESGISPSSFTYSILIDGFCKTNRMEKA-MMLLEEMDEKGFPPCPAAYC 445
Query: 304 FLIILYAGLGNKDKID---QIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW 360
LI LG + D ++++ L+ +SR Y ++ G L + + D+
Sbjct: 446 SLI---DALGKAKRYDLACELFQELKENCGSSSSRVYAVMIKHLGKAGRLDDAINMFDEM 502
Query: 361 KQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
+ + D+ A N L+ + G+ ++A + + C P
Sbjct: 503 NKLGCAP-DVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIP 544
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 114/259 (44%), Gaps = 12/259 (4%)
Query: 107 ALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFE-----GLPLSAKTSETYT 161
A+ + E MV H VL + + T + + + + +F+ GL A TYT
Sbjct: 339 AVRVVEDMVMHG-VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGL---AADGVTYT 394
Query: 162 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 221
AL++ A ++AE + + ++ L +A+ Y ++ Y VG++ + LV ++ +K
Sbjct: 395 ALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQK 454
Query: 222 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 281
V P++ TY ++ + L EM C G + Y +L+N A +L
Sbjct: 455 RVTPNVVTYTALSDGLCKQGDVCAANELLHEM-CSKGLELNIFTYNSLINGLCKAGNLEQ 513
Query: 282 AESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICIL 341
A T+++ +++ + TY +I D+ + + + K T Y ++
Sbjct: 514 A-MRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLM 572
Query: 342 SSYLMLGHLKEVGEIIDQW 360
+ + M G + E G+ + +W
Sbjct: 573 NGFCMSGRV-EGGKRLLEW 590
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 62/155 (40%), Gaps = 2/155 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY ++H Y E A +L + L N + Y ++ L GQV VVE++
Sbjct: 287 TYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDM 346
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
VV D + +S ++ + + DEM G + D V Y L+N A
Sbjct: 347 VMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQ-KRGLAADGVTYTALINGLCRAGE 405
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 313
L AE L E E +TY LI Y +G
Sbjct: 406 LKEAE-RVLQEMEDKGLDVDAVTYTVLIDGYCKVG 439
>gi|357499677|ref|XP_003620127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495142|gb|AES76345.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 412
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 88/206 (42%), Gaps = 2/206 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY++L+ Y A+ +F + ++ N YN M+ + + ++ + EE+
Sbjct: 172 TYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSYNIMINGFCKIKMTDEAMNLFEEM 231
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ ++PD+ TYN I+ + I K +DEM D G D + Y +L++ + +H
Sbjct: 232 HCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMH-DRGQPPDIITYSSLLDA-LCKNH 289
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
V+ + L + + TY LI G + I++ L + +T Y
Sbjct: 290 QVDKAIALLKNLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYT 349
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSA 364
++ + G E ++ + K ++
Sbjct: 350 VMIHGFCNKGLFDEALALLSKMKDNS 375
>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
Length = 988
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/334 (20%), Positives = 126/334 (37%), Gaps = 24/334 (7%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
A +VI+ + +G S +L L + + + A + E M V Y +
Sbjct: 467 AFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEM-KRGGLVADVYTYTIMV 525
Query: 132 DLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLS 189
D K I ++F + T TYTAL+H Y AK A ELFE +
Sbjct: 526 DSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCL 585
Query: 190 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 249
N + Y+ ++ + GQ+EK + E + VPD+ Y K++
Sbjct: 586 PNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMY---------------FKQY 630
Query: 250 LDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILY 309
D D+ + V Y L++ + H V L + I YD LI
Sbjct: 631 DD----DNSERPNVVIYGALLDGFCKL-HRVEEARKLLDAMSMEGCEPNQIVYDALIDGL 685
Query: 310 AGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD 369
+G D+ ++ + T Y ++ Y + +++ + +++ + +
Sbjct: 686 CKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAP-N 744
Query: 370 ISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
+ ++ VG T++A + ++ +K C P
Sbjct: 745 VVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQP 778
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 44/94 (46%)
Query: 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219
YT ++ T++A +L + +++ N + Y M+ + +G++E ++E +
Sbjct: 748 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMG 807
Query: 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
K V P+ TY + I C +D L+EM
Sbjct: 808 SKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 841
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 97/223 (43%), Gaps = 4/223 (1%)
Query: 121 VLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAK--TSETYTALLHLYAGAKWTEKAEE 178
VL Y T ID K ++ + E + + T TY +++ A ++A
Sbjct: 614 VLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYM 673
Query: 179 LFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCA 238
LFE K + L N ++Y+ ++ + VG++++ L++EE+ +K + P+++T+N + +
Sbjct: 674 LFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALV 733
Query: 239 ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQ 298
I++ M + G+ + + Y L+N N E +K +
Sbjct: 734 KAEEINEALVCFQNMK-NLKGTPNHITYSILINGLCRVRKF-NKAFVFWQEMQKQGLKPN 791
Query: 299 WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICIL 341
ITY +I A GN + +++ + S +Y I+
Sbjct: 792 TITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAII 834
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/328 (19%), Positives = 131/328 (39%), Gaps = 17/328 (5%)
Query: 83 GNQATVSELRHILKELRKSQRYKHALEISEWM---VTHKEFVLSDSDYATRIDLMTKVFG 139
G + +V +++ + R AL + + M H + VL Y ID K
Sbjct: 228 GYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVL----YNVCIDCFGKAGK 283
Query: 140 IHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 197
+ ++F + + TYT+++ + ++A E+FE+++Q+ A YN
Sbjct: 284 VDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNT 343
Query: 198 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 257
M+ Y S G+ ++ ++E K + +P + YN ++ + + + +EM D+
Sbjct: 344 MIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDA 403
Query: 258 GGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 317
+ + Y L+++ A + A E + +T + +I L K
Sbjct: 404 --APNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFP-NVMTVNIMI---DRLCKAKK 457
Query: 318 IDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC--NR 375
+D+ K+ S + + S LG V + ++Q SD +A
Sbjct: 458 LDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTS 517
Query: 376 LLGAFSDVGLTEKANEFHMLLLQKNCAP 403
L+ +F G E ++ ++ + C+P
Sbjct: 518 LIKSFFKCGRKEDGHKIFKEMIHRGCSP 545
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 108/278 (38%), Gaps = 11/278 (3%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLS 153
++ L K+++ A I E M HK + + + ID + K + R +E + S
Sbjct: 448 MIDRLCKAKKLDEACSIFEGM-NHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDS 506
Query: 154 AKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 211
K YT+L+ + E ++F+ + S + + N M G+ K
Sbjct: 507 DKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKG 566
Query: 212 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 271
+ EEIK + +PD+ +Y++ I + + M + G D Y ++
Sbjct: 567 RALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMK-EQGCVLDTHAYNTFID 625
Query: 272 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 331
+ + VN L E + Q +TY +I GL D++D+ + K
Sbjct: 626 GFCKSGK-VNKAYQLLEEMKTKGRQPTVVTYGSVI---DGLAKIDRLDEAYMLFEEAKSN 681
Query: 332 MTSRN---YICILSSYLMLGHLKEVGEIIDQWKQSATS 366
N Y ++ + +G + E I+++ Q +
Sbjct: 682 GLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLT 719
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 100/238 (42%), Gaps = 18/238 (7%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
YT L+ + + ++ LF ++++ + ++ ++ ++ G+++ +++E+
Sbjct: 200 AYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEM 259
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K + DI YN+ I +D KF E+ DD V Y +++ + +
Sbjct: 260 KSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDD-VTYTSMIGVLCKGNR 318
Query: 279 LVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 334
L A VE + + Q + + Y+ +I+ G G+ K D+ + L K +
Sbjct: 319 LDEA-----VEIFEQMEQNRNVPCAYAYNTMIM---GYGSAGKFDEAYSLLERQKARGCI 370
Query: 335 RNYI---CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
+ I CIL+ G L E ++ K+ A ++S N L+ G E A
Sbjct: 371 PSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAAP--NLSTYNVLIDMLCKAGEVEAA 426
>gi|10140738|gb|AAG13570.1|AC037425_1 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 811
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 85/183 (46%), Gaps = 3/183 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T++ L+H E+A +LFERV + + + YN ++ Y +G +++ +++ +
Sbjct: 291 TFSTLIHGLCKVGSMEEALDLFERVTKEGMELEIVTYNSLINGYRLLGLTKEIPKIIQMM 350
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ + V PD+ TY + I+ + ++++ K ++ D G + V Y L+N
Sbjct: 351 RGQGVEPDLVTYTILIAGHCESGDVEEGMKVRKDV-LDQGLQLNIVTYSVLLNALFKKGM 409
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM-TSRNY 337
+ + L E I Y LI Y LG +K Q+ ++ +++ M TS N+
Sbjct: 410 FCEID-NLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQVCNAMCSSQRVMPTSLNH 468
Query: 338 ICI 340
I
Sbjct: 469 FSI 471
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 111/257 (43%), Gaps = 11/257 (4%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVK 184
Y ID K+ I + R ++ + ++ T T +LL+ Y + AE F ++
Sbjct: 503 YNVVIDGYAKLGDIVNAVRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYFRAIQ 562
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
S L A+ Y +M G+V + + +E+ K + + TY++ + L D
Sbjct: 563 LSGLLPTAVTYTTLMDALSEAGEVNTMLSLFDEMVAKRIKANAVTYSVIVKGLCKQLRFD 622
Query: 245 QVKKFLDEMSCDSGGSD-DWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 303
+ L +M DS G + D + Y L+ + + ++ A + + + +TY+
Sbjct: 623 EAINVLKDM--DSKGINADPITYNTLIQGFCESENVQMAFHIHDIMLCRGLVPTP-VTYN 679
Query: 304 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGH----LKEVGEIIDQ 359
LI + G + + + +SLR K+ Y ++ + G + VG+++D
Sbjct: 680 LLINVLCLKGKVIQAEILLESLRENGIKLRKFAYTTLIKAQCAKGMPINAVLLVGKLLDA 739
Query: 360 WKQSATSDFDISACNRL 376
+++ DF +A NRL
Sbjct: 740 GFEASIEDFS-AAINRL 755
>gi|357491823|ref|XP_003616199.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355517534|gb|AES99157.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 872
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 87/186 (46%), Gaps = 10/186 (5%)
Query: 93 HILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPL 152
HIL + + + AL +SE H +S + Y+ + + K+ E+ + LP+
Sbjct: 573 HILSIYCRKREFNEALALSEEFRDHG---VSLNPYSYN-EFINKLCRESFPEKALQLLPV 628
Query: 153 SAKTSE-----TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 207
K + Y+ L+ +A ++KA +LF R+ + ++FN + ++ L + +
Sbjct: 629 MLKRNVLPGVVNYSTLISCFAKQTNSKKAVKLFTRMTKVGITFNIKTHTALIDLCIRNCK 688
Query: 208 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 267
++K + E+++++ V PD TYN I++ T + K D M G S + V Y
Sbjct: 689 IDKACDLFEDMEKRGVHPDQITYNTLIAAFCNTGEMIIAKTLFDRML-QEGCSPNVVTYS 747
Query: 268 NLVNIY 273
+N Y
Sbjct: 748 CFINAY 753
>gi|357120648|ref|XP_003562037.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Brachypodium distachyon]
Length = 807
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 159 TYTALLHLYAGAKWTEKAEELFER-------VKQSNLSFNALMYNEMMTLYMSVGQVEKV 211
T + +L Y A EKAE F R K+ + +N YN ++ Y GQ+EKV
Sbjct: 213 TMSTVLQAYKKAGEYEKAELFFRRWSSESHKRKEGHRCYNLYTYNTLIDTYGKAGQLEKV 272
Query: 212 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK---KFLDEMSC 255
+ ++ R+ VVPDIFT+N I ++QV + ++E C
Sbjct: 273 SDAFSQMLREGVVPDIFTFNTLIHVWGKHHRMEQVSSLVRMMEEFQC 319
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 49/252 (19%), Positives = 112/252 (44%), Gaps = 10/252 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY++L+ L + AK EKA ++ + L + + Y+ +++ + + V + E+
Sbjct: 496 TYSSLIQLLSTAKLPEKALYYLRKMHAAELPIDCVPYSVIISSFAKKDNLHMVECLFREM 555
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ D + Y++ I + A N+ Q + ++ +G + Y +L+ +Y A +
Sbjct: 556 ATSGICADAYVYSILIDAYAEVGNVHQAAAYFGLVT-KAGLCESSTIYNSLIKLYTKAGY 614
Query: 279 LVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT--KQKMTSR 335
L AE+ + KS+ T + +I LY+ ++ +I++SL+ + + +
Sbjct: 615 L--AEAHETYKLLKSLDTDTNLYASNCMISLYSDHCMVNEAREIFESLKASGCANEFSHA 672
Query: 336 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 395
+C+ Y + E I + Q+ + + N ++ + G TE+A +
Sbjct: 673 MMVCL---YKKVARYDEAHRISKE-MQALGLLTQVLSYNSVIQMYISCGKTEEAVKIFQN 728
Query: 396 LLQKNCAPTNAS 407
+L + P +A+
Sbjct: 729 MLASSTPPNDAT 740
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 86/207 (41%), Gaps = 3/207 (1%)
Query: 196 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 255
N M+ Y V ++++ V + ++R V+PD TY+ I + ++ +L +M
Sbjct: 463 NVMIKAYGLVEKLDEACEVADCMERYGVLPDYLTYSSLIQLLSTAKLPEKALYYLRKMH- 521
Query: 256 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 315
+ D V Y +++ + +L E A I ++ Y LI YA +GN
Sbjct: 522 AAELPIDCVPYSVIISSFAKKDNLHMVECLFREMATSGICADAYV-YSILIDAYAEVGNV 580
Query: 316 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNR 375
+ + + +S Y ++ Y G+L E E K S +D ++ A N
Sbjct: 581 HQAAAYFGLVTKAGLCESSTIYNSLIKLYTKAGYLAEAHETYKLLK-SLDTDTNLYASNC 639
Query: 376 LLGAFSDVGLTEKANEFHMLLLQKNCA 402
++ +SD + +A E L CA
Sbjct: 640 MISLYSDHCMVNEAREIFESLKASGCA 666
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 52/95 (54%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
T+TAL+ +A ELF+ + + + + YN ++ Y G+++K ++E++
Sbjct: 507 TFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDM 566
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253
+K +VPD +TY IS +T + + K F+D++
Sbjct: 567 HQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDL 601
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 131/341 (38%), Gaps = 31/341 (9%)
Query: 78 RWV-SEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTK 136
RW+ + G ++ ++ L K R A+E+ K + A + T
Sbjct: 249 RWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEV-------KRSLGGKGLAADVVTYCTL 301
Query: 137 VFGIHSGERYFEGLPLSAKT-----SETYTALLHLYAGAKWTEKAEELFERV-KQSNLSF 190
V G +++ G+ L + S T A+ L G + K ++ +E V K F
Sbjct: 302 VLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGF 361
Query: 191 --NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 248
N +YN ++ G ++K L+ + N+ P+ TY++ I S + +D
Sbjct: 362 VPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAIS 421
Query: 249 FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIIL 308
+ D M D G + Y +L+N L AE S +E + T+ LI
Sbjct: 422 YFDRMIQDGIGETVYA-YNSLINGQCKFGDLSAAE-SLFIEMTNKGVEPTATTFTSLISG 479
Query: 309 YAGLGNKDKIDQIWKSL----RMTKQKMTSRNY--ICILSSYLMLGHLKEVGEIIDQWKQ 362
Y KD Q+ K+ +M +T Y ++S + E E+ D+ +
Sbjct: 480 YC----KDL--QVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVE 533
Query: 363 SATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
+++ N L+ + G +KA E + QK P
Sbjct: 534 RKIKPTEVTY-NVLIEGYCRDGKIDKAFELLEDMHQKGLVP 573
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 58/121 (47%), Gaps = 2/121 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYTAL++ A ++A LF+R++ +N+ N++ Y + G + K A+ +
Sbjct: 717 TYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNM-KEAIGLHHA 775
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K ++ + T+N+ I + K L EM+ ++G D V Y L+ Y + +
Sbjct: 776 MLKGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMT-ENGIFPDCVTYSTLIYEYCRSGN 834
Query: 279 L 279
+
Sbjct: 835 V 835
Score = 37.7 bits (86), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 88/233 (37%), Gaps = 37/233 (15%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
T TY L+ Y +KA EL E + Q L + Y +++ S G+V K
Sbjct: 538 PTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDF 597
Query: 215 VEEIKRKNVVPDIFTYNLWI--------------SSCAAT---LNIDQV----------- 246
++++ ++NV + Y+ + +SC +N+D V
Sbjct: 598 IDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALK 657
Query: 247 ----KKFLDEMS--CDSGGSDDWVKYVNLVNIYITASHLVNA-ESSTLVEAEKSITQRQW 299
K F D + D G D V Y ++++ Y A E L+ E+
Sbjct: 658 QPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPN--V 715
Query: 300 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 352
+TY L+ G D+ ++K ++ S Y C L + G++KE
Sbjct: 716 VTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKE 768
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 14/187 (7%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSE---TYTALLH-LYAGAKWTEKAEELFER 182
Y T I ++ K + RYFE + + + S Y +L+H L KW +KA+EL
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQM-IDERLSPGNIVYNSLIHSLCIFDKW-DKAKELILE 469
Query: 183 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 242
+ + + + +N ++ + G+V + + + + R V PDI TY+ I
Sbjct: 470 MLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGK 529
Query: 243 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV---EAEKSITQRQW 299
+D+ K L M G D V Y L+N Y S + +A LV E E S
Sbjct: 530 MDEATKLLASM-VSVGMKPDCVTYNTLINGYCKISRMEDA----LVLFREMESSGVSPDI 584
Query: 300 ITYDFLI 306
ITY+ ++
Sbjct: 585 ITYNIIL 591
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 103/260 (39%), Gaps = 15/260 (5%)
Query: 75 VIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDS-DYATRIDL 133
V++R G V +LK L R + ALE+ + M D Y T I+
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Query: 134 ------MTKVFGIHSGERYFEG-LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQS 186
+ K +G + E G LP TY++++ A+ +KA E+ + ++
Sbjct: 209 FFKEGDLDKAYGTYH-EMLDRGILP----NVVTYSSIIAALCKAQAMDKAMEVLTSMVKN 263
Query: 187 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 246
+ N YN ++ Y S GQ ++ ++++ V PD+ TYN + +
Sbjct: 264 GVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEA 323
Query: 247 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI 306
+K D M+ G + Y L+ Y T LV + I ++ + LI
Sbjct: 324 RKMFDSMT-KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV-FSILI 381
Query: 307 ILYAGLGNKDKIDQIWKSLR 326
YA G D+ ++ +R
Sbjct: 382 CAYAKQGKVDQAMLVFSKMR 401
>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
Length = 973
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/206 (18%), Positives = 90/206 (43%), Gaps = 2/206 (0%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY L++ + + +A E++ + + + Y+ +M + VE V ++ E+
Sbjct: 197 TYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREM 256
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ V P++++Y + I D+ + L +M + G D + + L+ + A
Sbjct: 257 EAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKME-NEGCKPDVITHTVLIQVLCDAGR 315
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ +A+ + +KS + +TY L+ + G+ + +IW +++ Y
Sbjct: 316 ISDAK-DVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYT 374
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSA 364
++ + +G + E E+ D+ KQ
Sbjct: 375 AVIDALCQVGRVFEALEMFDEMKQKG 400
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 108/239 (45%), Gaps = 13/239 (5%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT ++ + A ++A ++F + ++N + L N ++ G+ ++ + ++
Sbjct: 512 TYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQL 571
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K N+ P TYN ++ + +V L+EM S + + Y +++
Sbjct: 572 KEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMY-HSNYPPNLITYNTILDCLCK--- 627
Query: 279 LVNAESSTLVEAEKSITQRQWIT--YDFLIILYAGLGNKDKIDQIWKSL-RMTKQKMTSR 335
N + ++ S+T + I + ++Y GL +++ ++ + +M K +
Sbjct: 628 --NGAVNDALDMLYSMTTKGCIPDLSSYNTVIY-GLVKEERYNEAFSIFCQMKKVLIPDY 684
Query: 336 NYIC-ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLL-GAFSDVGLTEKANEF 392
+C IL S++ +G +KE II + S D S+C+ L+ G G+ EK+ EF
Sbjct: 685 ATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGI-EKSIEF 742
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 90/226 (39%), Gaps = 5/226 (2%)
Query: 183 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 242
+K++ + NA YN ++ + G + V + VVP + TY++ + + +
Sbjct: 186 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRD 245
Query: 243 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 302
++ V L EM G + Y + + A A L + E + IT+
Sbjct: 246 VETVLWLLREMEA-HGVKPNVYSYTICIRVLGQAKRFDEA-YRILAKMENEGCKPDVITH 303
Query: 303 DFLIILYAGLGN-KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 361
LI + G D D WK ++ + QK YI +L + G + V EI + K
Sbjct: 304 TVLIQVLCDAGRISDAKDVFWK-MKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMK 362
Query: 362 QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 407
+D ++ A ++ A VG +A E + QK P S
Sbjct: 363 ADGYND-NVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYS 407
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 64/149 (42%), Gaps = 15/149 (10%)
Query: 94 ILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLS 153
+L + KS R + L++ E M H++ S T + T + G+ R + + L
Sbjct: 831 LLDAMGKSMRIEEMLKVQEEM--HRKGYES-----TYVTYNTIISGLVKSRRLEQAIDLY 883
Query: 154 --------AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSV 205
+ T TY LL A E AE LF + + N +YN ++ +
Sbjct: 884 YNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIA 943
Query: 206 GQVEKVALVVEEIKRKNVVPDIFTYNLWI 234
G EKV + +++ + + PDI +Y + I
Sbjct: 944 GNTEKVCHLFQDMVDQGINPDIKSYTIII 972
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 2/118 (1%)
Query: 165 HLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVV 224
HL K E A EL ++ K +S +YN ++ + ++ + E+K
Sbjct: 764 HLCKQKKALE-AHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCG 822
Query: 225 PDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 282
PD FTYNL + + ++ I+++ K +EM G +V Y +++ + + L A
Sbjct: 823 PDEFTYNLLLDAMGKSMRIEEMLKVQEEMH-RKGYESTYVTYNTIISGLVKSRRLEQA 879
>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
[Vitis vinifera]
Length = 644
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 78/192 (40%), Gaps = 35/192 (18%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT L+ E AE LF+R+ L + + YN +M Y G ++K ++ +
Sbjct: 395 TYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMM 454
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY----- 273
+ V PD+ TYN+ I +++ K LDE++ G S D V + N++ +
Sbjct: 455 RSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELT-RRGFSPDVVTFTNIIGGFSNKGN 513
Query: 274 --------------------ITASHLVNAESSTLVEAEKSITQRQW---------ITYDF 304
+T S L+N T AE ++ + I Y+
Sbjct: 514 FEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAGLKADVILYNS 573
Query: 305 LIILYAGLGNKD 316
LI + LGN D
Sbjct: 574 LIHGFCSLGNID 585
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 99/221 (44%), Gaps = 15/221 (6%)
Query: 175 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 234
K+EE + ++ NLS N ++N ++ + G + K A V +++ ++PD F+Y +
Sbjct: 306 KSEEAMDVLEVFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMM 365
Query: 235 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 294
+ +I K+L +M G Y L++ ++ AE ++ I
Sbjct: 366 AGYCKVKDISNALKYLGKM-LKRGIRPSVATYTLLIDSCCKPGNMEMAEYLF----QRMI 420
Query: 295 TQ---RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN---YICILSSYLMLG 348
T+ ++Y+ L+ G G K + + ++ L M + S + Y ++ + G
Sbjct: 421 TEGLVPDVVSYNTLM---NGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRG 477
Query: 349 HLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 389
+ E +I+D+ + S D+ ++G FS+ G E+A
Sbjct: 478 LVNEAKDILDELTRRGFSP-DVVTFTNIIGGFSNKGNFEEA 517
>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
Length = 899
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 96/226 (42%), Gaps = 36/226 (15%)
Query: 174 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 233
+ A+ +F + S +A Y ++ Y +GQ+E+ ++ E++R V PD+ TYN++
Sbjct: 593 DHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVF 652
Query: 234 ISSCAATLNIDQ----VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVE 289
I+ C +D+ +K+ +D SC+ W+ + + + + +H V+
Sbjct: 653 INGCGHMGYMDRAFSTLKRMIDA-SCEPNYWTYWILLKHFLKMSLVDAHYVDT------- 704
Query: 290 AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL-RMTKQKM--TSRNYICILSSYLM 346
+G+ N ++D +W+ L RM K + T+ Y I++ +
Sbjct: 705 --------------------SGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCK 744
Query: 347 LGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 392
L+E + D + S + L+ D+ L KA F
Sbjct: 745 ATRLEEACVLFDHMRGKDISPNE-EIYTMLIKCCCDIKLFGKAVSF 789
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 100/259 (38%), Gaps = 12/259 (4%)
Query: 150 LPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 207
+PL + +YT L+ + +A L + Q S N Y ++ G+
Sbjct: 151 MPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGR 210
Query: 208 VEKVALVVEEIKRKNVVPDIFTYNLWISS-CAATLNIDQ--VKKFLDEMSCDSGGSDDWV 264
+ V+EE+ + VVP ++TYN I C + D +K ++ C+ DDW
Sbjct: 211 IHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCN---PDDWT 267
Query: 265 KYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS 324
N++ IY + L +A IT+ +I Y D ++ S
Sbjct: 268 --YNIL-IYGLCGEKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTS 324
Query: 325 LRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 384
+ + K+ + Y +++ + KE E + + + + ++ ++ + VG
Sbjct: 325 MLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAP-NVVIYTSIIDGYCKVG 383
Query: 385 LTEKANEFHMLLLQKNCAP 403
A E L+ + C P
Sbjct: 384 KVGAALEVFRLMEHEGCRP 402
Score = 38.1 bits (87), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 46/279 (16%), Positives = 103/279 (36%), Gaps = 43/279 (15%)
Query: 127 YATRIDLMTKVFGIHSGERYFEGLPLSAKTS--ETYTALLHLYAGAKWTEKAEELFERVK 184
Y T I K + R FE + + T + Y L H + +AEE + +
Sbjct: 442 YTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSG---RAEEAYSFLV 498
Query: 185 QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244
+ + + Y ++ + G + A+++E++ + D +TY++ + + ++
Sbjct: 499 RKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLN 558
Query: 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 304
+ LD+M+ VK N+V I S ++
Sbjct: 559 EALSILDQMTLSG------VK-CNIVAYTIIISEMIKE---------------------- 589
Query: 305 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364
G D ++ + + K ++ Y +SSY +G ++E +I + ++
Sbjct: 590 --------GKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDG 641
Query: 365 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 403
+ D+ N + +G ++A ++ +C P
Sbjct: 642 VAP-DVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEP 679
>gi|242037185|ref|XP_002465987.1| hypothetical protein SORBIDRAFT_01g049600 [Sorghum bicolor]
gi|241919841|gb|EER92985.1| hypothetical protein SORBIDRAFT_01g049600 [Sorghum bicolor]
Length = 480
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 106/253 (41%), Gaps = 13/253 (5%)
Query: 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
S+TY LL + + A LF+ + L A +Y ++ Y G +++ VE
Sbjct: 126 SQTYARLLMMLGKCRQPGPAAALFKAMLSERLRPTADVYTALVGAYGYSGLLDEALAAVE 185
Query: 217 EIK-RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS-----CDSGGSDDWVKYVNLV 270
++K + PD +T+++ I+ CA + D + LDEMS C+S V + ++
Sbjct: 186 QMKGAADCKPDGYTFSVLINCCAKSRRFDLIPAVLDEMSYLGIECNS------VIHNAII 239
Query: 271 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 330
+ Y A+ E + E T + +I Y G D++++ + ++
Sbjct: 240 DGYGKAAMFEEMEGALSAMLESGSNVPDIYTMNSVIGAYGNHGRTDEMEKSYSEFQLMGV 299
Query: 331 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 390
+ ++ + ++ SY G ++ I K+ S ++ N ++ F G EK
Sbjct: 300 EPDTKTFNIMIKSYGKAGMYDKMMSIFRYMKKRFFSPTAVT-FNTVIECFGRAGNIEKME 358
Query: 391 EFHMLLLQKNCAP 403
+ L+ + P
Sbjct: 359 YYFRLMKIQGVKP 371
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 9/161 (5%)
Query: 132 DLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFN 191
D M +F + +R+F + T+ T+ ++ + A EK E F +K + N
Sbjct: 320 DKMMSIFR-YMKKRFF------SPTAVTFNTVIECFGRAGNIEKMEYYFRLMKIQGVKPN 372
Query: 192 ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 251
+ Y ++ Y G ++KV ++ + + NVV D +N IS+ A + +I +++ L
Sbjct: 373 PITYCSLVNGYSKAGLLDKVPGIIRQTENTNVVLDTPFFNCVISAYAKSGDIKIMEEMLQ 432
Query: 252 EMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 292
M + D + Y ++ Y TA + A +EAE+
Sbjct: 433 LMK-EKKCKPDKITYATMIQAY-TAQGMDEAARLLEMEAER 471
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/302 (20%), Positives = 121/302 (40%), Gaps = 5/302 (1%)
Query: 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRI 131
A N+ +++G VS I+ L K +KH + MV K + + + T +
Sbjct: 233 ALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSK-IMPNVVIFTTLV 291
Query: 132 DLMTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLS 189
D + K + + + + TYTAL+ + ++A+++F+ + + +
Sbjct: 292 DALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCA 351
Query: 190 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 249
N + Y+ ++ Y + +++K + EE+ ++ +VP+I TYN I +
Sbjct: 352 PNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIAL 411
Query: 250 LDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILY 309
EM SG D V Y L++ HL A + L E S +Y+ +I
Sbjct: 412 FHEMVA-SGQIPDLVTYRILLDYLCKTRHLDQA-MAMLKAIEGSNLAPDIQSYNIVIDGM 469
Query: 310 AGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD 369
+G + ++ SL Y +++ + G L E ++ + S D
Sbjct: 470 CRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDD 529
Query: 370 IS 371
+
Sbjct: 530 CT 531
>gi|224072823|ref|XP_002303899.1| predicted protein [Populus trichocarpa]
gi|222841331|gb|EEE78878.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 105/236 (44%), Gaps = 15/236 (6%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
+TS++ +LL++ W +A ELF++ + N++ +N M+ ++ G+ E+ + V
Sbjct: 131 RTSQSLNSLLNVLVDNGWFLEANELFDKGYEMGFRLNSVAFNVMIKGWLEKGEWEQASKV 190
Query: 215 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV-NIY 273
+E+ + V P + TYN I +D+ K L++M G + + + L+
Sbjct: 191 FDEMLERKVEPSVVTYNSLIGYLCRNGELDKAKGLLEDM-IKKGKRPNAITFALLMEGSC 249
Query: 274 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 333
+ H N + + E + + + +L + LG + KID+ L K++
Sbjct: 250 LIGEH--NEAKKMMFDMEYRGCKPTVVNFG---VLMSDLGKRGKIDEAKSVLHEMKKRHM 304
Query: 334 SRNYICILSSYLMLGHLKEVGEIIDQWK-----QSATSDFDISACNRLLGAFSDVG 384
+ +++ +++ +L + G D ++ Q + + + L+ F VG
Sbjct: 305 KPD---VVTYNILINYLCKEGRAADAYEVLFEMQVGGCEANAATYRMLVDGFCRVG 357
>gi|357467093|ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492879|gb|AES74082.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 530
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 81/191 (42%), Gaps = 2/191 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY+ ++ +A ++F + + NA+ +N +M +++ G+ EKV V ++
Sbjct: 284 TYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQM 343
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
KR D +YN I S N+D+ K LD M G N + I H
Sbjct: 344 KRLGCAADTISYNFLIESHCKDENLDEAVKVLDTMV--KKGVAPNASTFNSIFGCIAELH 401
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
VN + ++ +TY+ L+ ++A + D + ++ K + ++ + Y
Sbjct: 402 DVNGAHRMYAKMKELKCMPNTLTYNILMRMFADSKSIDMVLKLKKEMDESEVEPNVNTYR 461
Query: 339 CILSSYLMLGH 349
++ + GH
Sbjct: 462 ILILMFCEKGH 472
>gi|356528278|ref|XP_003532731.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27270-like [Glycine max]
Length = 1079
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 98/225 (43%), Gaps = 4/225 (1%)
Query: 169 GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIF 228
G K E AE + +R + NL + + YN + + G++ + + E + V P I
Sbjct: 765 GGKHQE-AENIVQRSLEENLELDTVAYNTFIKAMLEAGKLHFASSIFEHMISSGVAPSIE 823
Query: 229 TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV 288
T+N IS +D+ + ++ S S D+ Y+NL+ Y A ++ A S
Sbjct: 824 TFNTMISVYGQDQKLDRAVEMFNQASSCSVPLDEKT-YMNLIGYYGKAGLMLEA-SQLFS 881
Query: 289 EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLG 348
+ ++ + ++Y+ +I +YA G + ++++ +++ S Y+ ++ +Y
Sbjct: 882 KMQEGGIKPGKVSYNIMINVYANAGVLHETEKLFHTMQRQGYLPDSFTYLSLVQAYTRSL 941
Query: 349 HLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 393
+ + E I QS N LL AF GL +A +
Sbjct: 942 NYSKAEETIHAM-QSKGIPPSCVHFNILLHAFIKAGLIHEAKRVY 985
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/220 (19%), Positives = 93/220 (42%), Gaps = 24/220 (10%)
Query: 70 RSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYAT 129
+ A N++QR + E + +K + ++ + A I E M++ S A
Sbjct: 769 QEAENIVQRSLEENLELDTVAYNTFIKAMLEAGKLHFASSIFEHMIS--------SGVAP 820
Query: 130 RIDLMTKVFGIHSGERYFE------------GLPLSAKTSETYTALLHLYAGAKWTEKAE 177
I+ + ++ ++ + +PL KT Y L+ Y A +A
Sbjct: 821 SIETFNTMISVYGQDQKLDRAVEMFNQASSCSVPLDEKT---YMNLIGYYGKAGLMLEAS 877
Query: 178 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 237
+LF ++++ + + YN M+ +Y + G + + + ++R+ +PD FTY + +
Sbjct: 878 QLFSKMQEGGIKPGKVSYNIMINVYANAGVLHETEKLFHTMQRQGYLPDSFTYLSLVQAY 937
Query: 238 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277
+LN + ++ + M G V + L++ +I A
Sbjct: 938 TRSLNYSKAEETIHAMQ-SKGIPPSCVHFNILLHAFIKAG 976
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 95/237 (40%), Gaps = 39/237 (16%)
Query: 191 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 250
N Y ++ ++ G E +E++ VVP+ TY+L I+ A + N D+V++
Sbjct: 300 NNFTYTVAISSFVKEGLHEDAFKTFDEMRNYGVVPEELTYSLLINLNAKSGNRDEVQRLY 359
Query: 251 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES--STLVEAEKSITQRQWITYDFLIIL 308
++M ++ +L+++Y A S S +V + S + + Y LI +
Sbjct: 360 EDMRFRGIIPSNYT-CASLLSLYYKYEDYPRALSLFSEMVRNKISTDE---VIYGLLIRI 415
Query: 309 YAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS----- 363
Y LG + + ++ + Q + + Y+ + +L G++ + E+I+ K S
Sbjct: 416 YGKLGLYEDAHKTFEETKNRGQLTSEKTYLAMAQVHLTSGNVDKALEVIELMKSSNLWFS 475
Query: 364 ----------------------------ATSDFDISACNRLLGAFSDVGLTEKANEF 392
T D +CN +L + + LT KA EF
Sbjct: 476 RFAYIVLLQCYVMKEDVASAEGTFLALSKTGPPDAGSCNDMLSLYMGLNLTNKAKEF 532
>gi|218193742|gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
Length = 1874
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TYT L+H A T +A + F+++K+ ++ +A YN ++ + G++E VVEE+
Sbjct: 1662 TYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEM 1721
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFL---DEMSCDS 257
+ + P++ T+N IS+ + K L +E SC+
Sbjct: 1722 RTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNP 1763
Score = 41.6 bits (96), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 40/213 (18%), Positives = 93/213 (43%), Gaps = 5/213 (2%)
Query: 74 NVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYA-TRID 132
+I + V G ++ + +++ L + R+ A++ M + V+ D+ +D
Sbjct: 1507 GLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKM--DRFGVVKDTKAMNVLLD 1564
Query: 133 LMTKVFGIHSGERYFEGLPLSAKTSE-TYTALLHLYAGAKWTEKAEELFERVKQSNLSFN 191
+ K + F+ L + E ++ L+H + A+ ++A + E +KQ S +
Sbjct: 1565 TLCKERSVKRARGVFQELRGTIPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPS 1624
Query: 192 ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 251
+ Y ++ Y + V +++E++++ P++ TY + + + + D
Sbjct: 1625 VVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFD 1684
Query: 252 EMSCDSGGSDDWVKYVNLVNIYITASHLVNAES 284
++ D G + D Y +L+ I A L +A S
Sbjct: 1685 KLKED-GVAPDASFYNSLIYILGRAGRLEDAYS 1716
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 124/284 (43%), Gaps = 20/284 (7%)
Query: 128 ATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEK-AEELFERVKQS 186
R++L+ K I + + + +P +Y A+L K + K AE +F+ + +S
Sbjct: 142 CARVNLINKALSIVNLAKSYGFMP----GVLSYNAILDAVIRTKQSVKIAEGIFKEMVES 197
Query: 187 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 246
+S N YN ++ + + G +E E++R +P++ TYN I + I +
Sbjct: 198 GVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEA 257
Query: 247 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW----ITY 302
K L M+ G + + + Y ++N + E+S ++E +++R++ +T+
Sbjct: 258 FKLLRLMAL-KGLNPNLISYNVVINGLCREGQM--KETSEILE---EMSKRRYVPDRVTF 311
Query: 303 DFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR--NYICILSSYLMLGHLKEVGEIIDQW 360
+ LI Y +GN + + M K ++ Y +++S G+L E +DQ
Sbjct: 312 NTLINGYCNVGNFHQ--ALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQM 369
Query: 361 KQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 404
+ + L+ FS G ++A + +++ PT
Sbjct: 370 RDRGLHP-NGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPT 412
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 106/249 (42%), Gaps = 3/249 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY ++ Y + +A +L + L+ N + YN ++ GQ+++ + ++EE+
Sbjct: 240 TYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEM 299
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
++ VPD T+N I+ N Q EM +G S + V Y L+N A +
Sbjct: 300 SKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEM-VKNGLSPNVVTYTTLINSMCKAGN 358
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
L N L + TY LI ++ G + QI K + T Y
Sbjct: 359 L-NRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYN 417
Query: 339 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398
+++ + +LG +++ ++ + + D+ + + ++ F EKA + + ++
Sbjct: 418 ALINGHCILGRMEDASGLLQEMIERGFIP-DVVSYSTIISGFCRNQELEKAFQLKVEMVA 476
Query: 399 KNCAPTNAS 407
K +P A+
Sbjct: 477 KGISPDVAT 485
Score = 38.1 bits (87), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 52/264 (19%), Positives = 104/264 (39%), Gaps = 26/264 (9%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY AL++ + E A L + + + + + Y+ +++ + ++EK + E+
Sbjct: 415 TYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEM 474
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
K + PD+ TY+ I + +V EM G D V Y +L+N Y
Sbjct: 475 VAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEM-LSLGLPPDEVTYTSLINAYCIEGD 533
Query: 279 LVNAESSTLVEAEKSITQRQW----ITYDFLI--------------ILYAGLGNKDKIDQ 320
L A + + Q+ + +TY+ LI +L L + ++
Sbjct: 534 LDKA-----LRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNE 588
Query: 321 I-WKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGA 379
I + +L + ++ + ++ + M G + E +++ Q + N ++
Sbjct: 589 ITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYK-LNEEVYNVIIHG 647
Query: 380 FSDVGLTEKANEFHMLLLQKNCAP 403
S VG EKA + +L AP
Sbjct: 648 HSKVGNIEKAYNLYKEMLHSGFAP 671
>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
Length = 688
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 87/200 (43%), Gaps = 2/200 (1%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +LL+ Y A ++A LF ++++ L+ L YN + Y +G +E+ ++ EE+
Sbjct: 347 TYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEM 406
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ +P++ TY + + ++ ++F DEM G D Y + +
Sbjct: 407 GEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEM-LSKGLQPDCFAYNTRICAELILGD 465
Query: 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 338
+ A V + I+ +TY+ LI GN ++ + + Y
Sbjct: 466 IARALELREVLMLEGISS-DTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYT 524
Query: 339 CILSSYLMLGHLKEVGEIID 358
C++ ++ G L+E +I +
Sbjct: 525 CLIHAHCERGLLREARKIFN 544
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 48/100 (48%)
Query: 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 214
T TY A++H + E A+ F ++ L + + YN ++ Y G +++ L+
Sbjct: 308 PTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLL 367
Query: 215 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 254
+++R + P + TYN+ I ++++ + +EM
Sbjct: 368 FGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMG 407
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 58/135 (42%), Gaps = 1/135 (0%)
Query: 98 LRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTS 157
L++ ++ K A+ + E + +D Y I +T+ + EG+ LS K S
Sbjct: 215 LKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKAS 274
Query: 158 E-TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216
TY L+ +K +L ++ + + YN M+ + G VE +
Sbjct: 275 SFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFA 334
Query: 217 EIKRKNVVPDIFTYN 231
E++ ++PD+ TYN
Sbjct: 335 EMRAMGLLPDVITYN 349
>gi|255553861|ref|XP_002517971.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542953|gb|EEF44489.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1029
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 110/253 (43%), Gaps = 12/253 (4%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
TY +L+ +++GA ++A +L ++ ++ ++ Y +GQ+ A V +E+
Sbjct: 589 TYNSLIQMFSGADLMDQARDLLTEMQGVGFKPQCATFSSIIACYARLGQLSDAAGVYQEM 648
Query: 219 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278
+ V P+ Y I+ A N+ + K+ M + G S + + +L+ +Y
Sbjct: 649 VKVGVKPNEVVYGAIINGYAEEGNVKEALKYFHMME-EYGISANQIVLTSLIKVYSKLGC 707
Query: 279 LVNA----ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 334
+A + +E I I + +I LYA LG + + ++ +LR K
Sbjct: 708 FDSAKQLYQKMMCLEGGPDI-----IASNSMISLYADLGMISEAELVFNNLR-EKGSADG 761
Query: 335 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 394
+Y ++ Y +G L E ++ ++ K S +S N+++ ++ G + E
Sbjct: 762 VSYATMMYLYKGMGMLDEAIDVAEEMKLSGLLRDSVSY-NKVMTCYATNGQLLECGELLH 820
Query: 395 LLLQKNCAPTNAS 407
+++K P +
Sbjct: 821 EMIKKKLFPDGGT 833
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 49/95 (51%)
Query: 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213
+ + TY L+ LY A A ++F + +S ++ + + +N M+ S G + +
Sbjct: 339 PRLTSTYNTLIDLYGKAGRLGDAADIFSDMMKSGVAMDTITFNTMIYTCGSHGHLSEAET 398
Query: 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 248
++ +++ + V PD TYN+++S A NID K
Sbjct: 399 LLNKMEDRGVSPDTRTYNIFLSLYADEGNIDAAIK 433
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 98/227 (43%), Gaps = 9/227 (3%)
Query: 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218
+Y +++LY G ++A ++ E +K S L +++ YN++MT Y + GQ+ + ++ E+
Sbjct: 763 SYATMMYLYKGMGMLDEAIDVAEEMKLSGLLRDSVSYNKVMTCYATNGQLLECGELLHEM 822
Query: 219 KRKNVVPDIFTYNLWISSC-AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY-ITA 276
+K + PD T+ + + L + V + E S G + + + +++ +
Sbjct: 823 IKKKLFPDGGTFKILFTVLKKGGLPTEAVMQL--ESSYHEG--KPYARQAVITSVFSLVG 878
Query: 277 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 336
H + ES + K+ Y+ I Y G DK + ++ +
Sbjct: 879 LHALAMESCKIF--TKADIALDLFAYNVAIFAYGSSGEIDKALNTFMKMQDEGLEPDLVT 936
Query: 337 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDV 383
IC++ Y G ++ V I Q K D SA ++ A+ D
Sbjct: 937 SICLVYCYGKAGMVEGVKRIYSQLKYRDIKPSD-SAFKAVVDAYEDA 982
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 98/246 (39%), Gaps = 15/246 (6%)
Query: 149 GLPLSAKTSETYTALLHLYA-GAKWTEKAEELFERVKQ-SNLSFNALMYNEMMTLYMSVG 206
G LSAKT+ A++ YA W E AE +F R + + L YN M+ Y
Sbjct: 511 GGGLSAKTN---AAIIDAYAENGLWAE-AEAVFYRKRDLVGQKTDILEYNVMIKAYGKGK 566
Query: 207 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 266
EK + ++ PD TYN I + +DQ + L EM G +
Sbjct: 567 LYEKAFTLFRSMRHHGTWPDECTYNSLIQMFSGADLMDQARDLLTEMQ-GVGFKPQCATF 625
Query: 267 VNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 326
+++ Y L +A + E K + + Y +I YA GN + + K
Sbjct: 626 SSIIACYARLGQLSDA-AGVYQEMVKVGVKPNEVVYGAIINGYAEEGN---VKEALKYFH 681
Query: 327 MTKQKMTSRNYICILS---SYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDV 383
M ++ S N I + S Y LG ++ Q DI A N ++ ++D+
Sbjct: 682 MMEEYGISANQIVLTSLIKVYSKLGCFDSAKQLY-QKMMCLEGGPDIIASNSMISLYADL 740
Query: 384 GLTEKA 389
G+ +A
Sbjct: 741 GMISEA 746
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.131 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,929,678,643
Number of Sequences: 23463169
Number of extensions: 227077788
Number of successful extensions: 651938
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3070
Number of HSP's successfully gapped in prelim test: 2200
Number of HSP's that attempted gapping in prelim test: 617777
Number of HSP's gapped (non-prelim): 25571
length of query: 408
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 263
effective length of database: 8,957,035,862
effective search space: 2355700431706
effective search space used: 2355700431706
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)