Query 015370
Match_columns 408
No_of_seqs 491 out of 2683
Neff 11.1
Searched_HMMs 29240
Date Mon Mar 25 11:26:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015370.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015370hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g26_A Pentatricopeptide repea 100.0 4.1E-33 1.4E-37 260.2 23.6 204 142-347 8-223 (501)
2 4g26_A Pentatricopeptide repea 100.0 4.8E-33 1.6E-37 259.8 23.7 207 174-383 7-223 (501)
3 2xpi_A Anaphase-promoting comp 100.0 1.4E-29 4.9E-34 244.6 35.6 325 67-404 98-513 (597)
4 2xpi_A Anaphase-promoting comp 100.0 1.6E-29 5.6E-34 244.2 33.3 304 86-398 198-578 (597)
5 1w3b_A UDP-N-acetylglucosamine 100.0 6.8E-25 2.3E-29 200.4 37.7 325 67-405 47-372 (388)
6 1w3b_A UDP-N-acetylglucosamine 100.0 2.5E-24 8.5E-29 196.7 37.3 324 67-404 13-337 (388)
7 2y4t_A DNAJ homolog subfamily 99.9 1.4E-23 4.9E-28 195.4 34.6 308 84-405 22-362 (450)
8 2y4t_A DNAJ homolog subfamily 99.9 5.2E-21 1.8E-25 178.1 34.9 326 66-404 39-413 (450)
9 3ieg_A DNAJ homolog subfamily 99.9 1.7E-20 5.9E-25 168.7 36.5 306 87-405 2-339 (359)
10 2gw1_A Mitochondrial precursor 99.9 2.1E-20 7E-25 176.9 31.9 321 67-398 20-443 (514)
11 3hym_B Cell division cycle pro 99.9 6.1E-20 2.1E-24 163.3 32.7 294 84-387 18-322 (330)
12 2gw1_A Mitochondrial precursor 99.9 7.5E-20 2.6E-24 173.0 30.5 322 66-399 52-478 (514)
13 3fp2_A TPR repeat-containing p 99.9 8.4E-19 2.9E-23 166.9 36.0 322 66-399 38-491 (537)
14 3ieg_A DNAJ homolog subfamily 99.9 4.3E-18 1.5E-22 153.0 36.2 306 66-382 16-352 (359)
15 3hym_B Cell division cycle pro 99.9 2.4E-19 8.2E-24 159.4 27.5 276 120-405 18-303 (330)
16 1fch_A Peroxisomal targeting s 99.9 4.4E-20 1.5E-24 167.0 22.8 293 99-396 36-356 (368)
17 4eqf_A PEX5-related protein; a 99.8 9.5E-20 3.2E-24 164.8 18.3 267 123-395 64-352 (365)
18 4eqf_A PEX5-related protein; a 99.8 9.5E-19 3.2E-23 158.2 23.0 267 86-359 63-352 (365)
19 3fp2_A TPR repeat-containing p 99.8 6.5E-18 2.2E-22 160.7 28.7 303 87-399 24-407 (537)
20 1fch_A Peroxisomal targeting s 99.8 3.3E-18 1.1E-22 154.6 25.3 266 87-359 63-355 (368)
21 3cv0_A Peroxisome targeting si 99.8 2.6E-18 8.9E-23 152.5 23.1 278 87-395 20-311 (327)
22 3spa_A Mtrpol, DNA-directed RN 99.8 5.4E-21 1.9E-25 184.1 4.8 148 124-277 127-286 (1134)
23 3spa_A Mtrpol, DNA-directed RN 99.8 3.9E-20 1.3E-24 178.3 10.5 125 157-282 127-255 (1134)
24 3cv0_A Peroxisome targeting si 99.8 3E-18 1E-22 152.0 21.3 234 157-399 21-269 (327)
25 3mkr_A Coatomer subunit epsilo 99.8 1.1E-16 3.7E-21 139.6 28.8 274 95-391 6-286 (291)
26 3mkr_A Coatomer subunit epsilo 99.8 1E-16 3.5E-21 139.8 27.7 253 132-404 7-267 (291)
27 1b89_A Protein (clathrin heavy 99.7 1.1E-17 3.6E-22 149.8 13.5 278 69-392 19-304 (449)
28 3uq3_A Heat shock protein STI1 99.7 3.2E-15 1.1E-19 127.7 25.3 226 157-399 5-236 (258)
29 1b89_A Protein (clathrin heavy 99.7 2.8E-17 9.7E-22 147.1 12.5 240 100-383 15-254 (449)
30 2xm6_A Protein corresponding t 99.7 2.4E-13 8.2E-18 127.8 39.0 274 101-400 128-433 (490)
31 2xm6_A Protein corresponding t 99.7 2.8E-13 9.5E-18 127.3 38.7 305 67-400 57-397 (490)
32 2pl2_A Hypothetical conserved 99.7 4.1E-15 1.4E-19 123.8 22.9 200 189-397 2-212 (217)
33 2ooe_A Cleavage stimulation fa 99.7 1.8E-13 6E-18 130.0 35.7 324 67-400 26-455 (530)
34 3u4t_A TPR repeat-containing p 99.7 1.7E-14 5.7E-19 124.4 24.5 197 89-292 4-207 (272)
35 3u4t_A TPR repeat-containing p 99.7 1.4E-14 4.7E-19 125.0 23.4 246 125-377 4-262 (272)
36 3uq3_A Heat shock protein STI1 99.7 9.7E-15 3.3E-19 124.6 21.7 222 89-362 6-235 (258)
37 2pl2_A Hypothetical conserved 99.7 1.1E-14 3.9E-19 121.2 21.5 198 155-360 3-211 (217)
38 4g1t_A Interferon-induced prot 99.7 6.4E-14 2.2E-18 130.9 28.7 343 60-408 58-469 (472)
39 1xnf_A Lipoprotein NLPI; TPR, 99.7 2.3E-15 7.8E-20 130.0 17.2 221 100-327 17-243 (275)
40 2vq2_A PILW, putative fimbrial 99.7 1.4E-13 4.7E-18 114.8 27.3 204 156-363 7-211 (225)
41 1ouv_A Conserved hypothetical 99.7 4.1E-13 1.4E-17 115.9 31.0 224 156-400 5-252 (273)
42 2ho1_A Type 4 fimbrial biogene 99.7 1.3E-13 4.4E-18 117.4 26.8 202 157-364 37-239 (252)
43 2q7f_A YRRB protein; TPR, prot 99.6 3.2E-14 1.1E-18 120.3 20.8 202 156-364 22-223 (243)
44 1xnf_A Lipoprotein NLPI; TPR, 99.6 1.1E-14 3.6E-19 125.8 18.0 245 136-393 17-269 (275)
45 2ooe_A Cleavage stimulation fa 99.6 2.7E-12 9.2E-17 121.8 36.2 322 67-398 60-491 (530)
46 2vq2_A PILW, putative fimbrial 99.6 9.4E-14 3.2E-18 115.8 23.2 199 126-328 10-211 (225)
47 2ho1_A Type 4 fimbrial biogene 99.6 9.8E-14 3.3E-18 118.2 23.7 200 88-293 37-238 (252)
48 4g1t_A Interferon-induced prot 99.6 9.4E-13 3.2E-17 123.0 31.5 304 85-398 48-400 (472)
49 2q7f_A YRRB protein; TPR, prot 99.6 1.6E-14 5.5E-19 122.2 17.4 201 86-293 21-222 (243)
50 2h6f_A Protein farnesyltransfe 99.6 1.7E-13 5.7E-18 123.6 24.4 233 156-398 96-347 (382)
51 1ouv_A Conserved hypothetical 99.6 1E-12 3.5E-17 113.4 28.4 222 125-364 7-252 (273)
52 2h6f_A Protein farnesyltransfe 99.6 8E-14 2.7E-18 125.7 22.0 246 125-381 98-364 (382)
53 3sf4_A G-protein-signaling mod 99.6 6.6E-14 2.2E-18 127.9 21.5 299 85-386 6-363 (406)
54 3sf4_A G-protein-signaling mod 99.6 6.2E-14 2.1E-18 128.1 21.3 277 121-398 6-335 (406)
55 4a1s_A PINS, partner of inscut 99.6 2E-14 6.8E-19 131.8 16.9 167 87-255 47-251 (411)
56 4a1s_A PINS, partner of inscut 99.6 2.9E-14 9.8E-19 130.8 17.2 275 124-399 48-372 (411)
57 3ro2_A PINS homolog, G-protein 99.6 6.8E-14 2.3E-18 124.1 18.9 278 90-399 7-332 (338)
58 3ro2_A PINS homolog, G-protein 99.6 1.7E-13 6E-18 121.4 18.9 269 64-363 16-332 (338)
59 3ulq_A Response regulator aspa 99.6 5.1E-13 1.7E-17 121.4 21.0 298 98-399 22-368 (383)
60 2ond_A Cleavage stimulation fa 99.5 1.1E-11 3.7E-16 109.0 28.6 235 124-364 8-271 (308)
61 2ond_A Cleavage stimulation fa 99.5 1.1E-11 3.7E-16 109.0 27.7 217 105-329 33-271 (308)
62 3nf1_A KLC 1, kinesin light ch 99.5 1.3E-13 4.3E-18 121.2 14.5 240 156-398 26-306 (311)
63 4abn_A Tetratricopeptide repea 99.5 8.2E-13 2.8E-17 123.3 18.5 214 139-359 83-317 (474)
64 3vtx_A MAMA; tetratricopeptide 99.5 5E-12 1.7E-16 102.1 20.7 165 156-326 4-168 (184)
65 1xi4_A Clathrin heavy chain; a 99.5 3.9E-11 1.3E-15 120.1 30.8 252 95-397 1056-1307(1630)
66 4abn_A Tetratricopeptide repea 99.5 2.4E-12 8.2E-17 120.2 20.6 215 172-395 83-317 (474)
67 3vtx_A MAMA; tetratricopeptide 99.5 1.2E-11 4.2E-16 99.7 22.3 166 191-362 4-169 (184)
68 1xi4_A Clathrin heavy chain; a 99.5 7.3E-11 2.5E-15 118.2 30.6 257 100-391 1088-1376(1630)
69 3nf1_A KLC 1, kinesin light ch 99.5 5E-13 1.7E-17 117.3 13.7 239 87-362 26-306 (311)
70 3q15_A PSP28, response regulat 99.4 7.5E-11 2.5E-15 106.8 25.4 309 85-398 7-364 (378)
71 3as5_A MAMA; tetratricopeptide 99.4 7.3E-11 2.5E-15 94.8 21.9 165 125-294 9-174 (186)
72 3e4b_A ALGK; tetratricopeptide 99.4 9E-11 3.1E-15 108.8 24.3 94 67-169 17-118 (452)
73 3as5_A MAMA; tetratricopeptide 99.4 1.2E-10 4.2E-15 93.5 21.1 165 228-399 9-173 (186)
74 1hz4_A MALT regulatory protein 99.4 3.2E-10 1.1E-14 102.3 26.1 268 93-362 19-321 (373)
75 3ulq_A Response regulator aspa 99.4 1.6E-11 5.6E-16 111.4 17.4 289 67-362 26-367 (383)
76 1hz4_A MALT regulatory protein 99.4 3.3E-10 1.1E-14 102.3 24.8 271 127-398 17-321 (373)
77 3e4b_A ALGK; tetratricopeptide 99.3 3.5E-10 1.2E-14 104.8 23.5 188 159-364 178-388 (452)
78 4gyw_A UDP-N-acetylglucosamine 99.3 1E-10 3.4E-15 113.8 19.9 163 157-325 9-171 (723)
79 3edt_B KLC 2, kinesin light ch 99.3 4.8E-11 1.7E-15 102.9 15.8 205 191-398 42-280 (283)
80 4gyw_A UDP-N-acetylglucosamine 99.3 1.9E-10 6.4E-15 111.9 20.8 166 191-362 8-173 (723)
81 4i17_A Hypothetical protein; T 99.3 1.3E-09 4.6E-14 91.0 22.3 198 155-364 5-210 (228)
82 4e6h_A MRNA 3'-END-processing 99.2 9E-08 3.1E-12 92.2 35.8 130 69-201 48-194 (679)
83 3q15_A PSP28, response regulat 99.2 1.2E-09 4E-14 98.9 21.8 201 158-362 142-364 (378)
84 4i17_A Hypothetical protein; T 99.2 7.3E-10 2.5E-14 92.6 19.0 205 86-305 5-220 (228)
85 3edt_B KLC 2, kinesin light ch 99.2 8.2E-11 2.8E-15 101.4 12.8 217 73-292 28-280 (283)
86 1qqe_A Vesicular transport pro 99.2 7.3E-10 2.5E-14 96.4 18.4 233 106-360 3-266 (292)
87 2fo7_A Synthetic consensus TPR 99.2 1.3E-09 4.3E-14 82.3 14.6 128 90-220 3-131 (136)
88 3mv2_B Coatomer subunit epsilo 99.2 1.8E-08 6.2E-13 86.5 23.0 245 95-364 20-283 (310)
89 2fo7_A Synthetic consensus TPR 99.1 4.3E-09 1.5E-13 79.3 17.3 130 265-399 3-132 (136)
90 3qky_A Outer membrane assembly 99.1 2.8E-09 9.6E-14 91.0 17.5 168 85-255 12-223 (261)
91 3mv2_B Coatomer subunit epsilo 99.1 3.4E-08 1.2E-12 84.8 23.0 258 71-363 28-305 (310)
92 1qqe_A Vesicular transport pro 99.1 8.4E-09 2.9E-13 89.7 19.5 211 172-398 32-268 (292)
93 3qky_A Outer membrane assembly 99.1 2.8E-08 9.4E-13 84.8 22.5 188 155-364 13-225 (261)
94 3qou_A Protein YBBN; thioredox 99.1 5.3E-09 1.8E-13 90.7 17.8 174 78-254 107-282 (287)
95 2r5s_A Uncharacterized protein 99.1 3.2E-09 1.1E-13 84.8 14.6 162 90-254 8-171 (176)
96 3urz_A Uncharacterized protein 99.1 3E-09 1E-13 87.5 14.8 163 88-255 4-185 (208)
97 3urz_A Uncharacterized protein 99.0 1.4E-08 4.9E-13 83.4 17.2 122 233-362 60-185 (208)
98 2pzi_A Probable serine/threoni 99.0 1.5E-08 5E-13 98.9 19.0 183 168-359 402-601 (681)
99 2pzi_A Probable serine/threoni 99.0 9.9E-09 3.4E-13 100.1 16.9 174 203-385 402-583 (681)
100 4e6h_A MRNA 3'-END-processing 99.0 1.5E-06 5.1E-11 83.8 31.5 219 177-399 329-570 (679)
101 2yhc_A BAMD, UPF0169 lipoprote 99.0 6.9E-08 2.4E-12 80.3 19.6 105 239-364 108-214 (225)
102 3dra_A Protein farnesyltransfe 99.0 4.1E-07 1.4E-11 78.8 24.8 217 140-362 49-286 (306)
103 2yhc_A BAMD, UPF0169 lipoprote 99.0 1.4E-07 4.9E-12 78.4 20.6 190 191-400 3-214 (225)
104 3qou_A Protein YBBN; thioredox 99.0 2.6E-08 8.9E-13 86.3 16.4 165 189-359 114-280 (287)
105 3dra_A Protein farnesyltransfe 99.0 2.5E-07 8.4E-12 80.2 22.2 218 103-327 48-286 (306)
106 2r5s_A Uncharacterized protein 99.0 1.5E-08 5E-13 80.9 13.5 79 318-397 93-171 (176)
107 2vsy_A XCC0866; transferase, g 99.0 3.1E-08 1.1E-12 94.7 18.2 152 101-256 2-157 (568)
108 4ga2_A E3 SUMO-protein ligase 98.9 4.8E-09 1.7E-13 81.3 9.8 58 162-220 36-93 (150)
109 2ifu_A Gamma-SNAP; membrane fu 98.9 8.9E-08 3E-12 83.8 18.8 160 200-361 44-222 (307)
110 3u3w_A Transcriptional activat 98.9 3.8E-07 1.3E-11 79.1 22.5 164 234-398 82-265 (293)
111 3rjv_A Putative SEL1 repeat pr 98.9 1.4E-07 4.7E-12 77.7 18.7 176 175-364 4-198 (212)
112 4ga2_A E3 SUMO-protein ligase 98.9 9.9E-09 3.4E-13 79.5 10.9 146 164-314 4-149 (150)
113 2vsy_A XCC0866; transferase, g 98.9 4.8E-08 1.6E-12 93.4 17.6 154 205-364 2-158 (568)
114 3rjv_A Putative SEL1 repeat pr 98.9 1.3E-07 4.3E-12 77.9 17.5 46 172-220 68-117 (212)
115 2ifu_A Gamma-SNAP; membrane fu 98.9 1.5E-07 5E-12 82.4 17.9 202 169-397 3-222 (307)
116 3u3w_A Transcriptional activat 98.8 8.3E-07 2.8E-11 77.0 21.0 154 131-284 82-258 (293)
117 2c2l_A CHIP, carboxy terminus 98.8 1.1E-07 3.8E-12 82.0 14.6 99 191-293 3-101 (281)
118 1hh8_A P67PHOX, NCF-2, neutrop 98.8 6.5E-07 2.2E-11 73.4 18.4 126 127-255 9-149 (213)
119 3q7a_A Farnesyltransferase alp 98.8 8.2E-06 2.8E-10 71.5 25.4 230 161-397 58-329 (349)
120 1hh8_A P67PHOX, NCF-2, neutrop 98.8 7.1E-07 2.4E-11 73.2 17.9 91 160-255 9-99 (213)
121 3gyz_A Chaperone protein IPGC; 98.8 1.6E-07 5.3E-12 72.6 12.7 95 301-398 38-132 (151)
122 2qfc_A PLCR protein; TPR, HTH, 98.7 1.5E-06 5.2E-11 75.3 20.1 167 194-361 77-264 (293)
123 3gw4_A Uncharacterized protein 98.7 3.8E-07 1.3E-11 74.1 15.1 159 203-363 3-176 (203)
124 1na0_A Designed protein CTPR3; 98.7 8.1E-07 2.8E-11 65.5 15.1 97 157-255 9-105 (125)
125 2qfc_A PLCR protein; TPR, HTH, 98.7 2.8E-06 9.4E-11 73.7 20.6 167 159-326 77-264 (293)
126 4f3v_A ESX-1 secretion system 98.7 1.6E-06 5.6E-11 73.4 18.3 190 100-296 18-240 (282)
127 1a17_A Serine/threonine protei 98.7 6.3E-07 2.2E-11 70.1 15.1 129 157-290 13-143 (166)
128 1a17_A Serine/threonine protei 98.7 7.1E-07 2.4E-11 69.8 15.1 127 266-397 16-144 (166)
129 4gco_A Protein STI-1; structur 98.7 6.4E-07 2.2E-11 66.8 14.0 97 157-255 13-109 (126)
130 2c2l_A CHIP, carboxy terminus 98.7 1.3E-07 4.4E-12 81.6 11.5 193 87-292 3-198 (281)
131 3gw4_A Uncharacterized protein 98.7 1E-06 3.4E-11 71.5 15.7 159 167-327 2-175 (203)
132 4gco_A Protein STI-1; structur 98.7 7.6E-07 2.6E-11 66.4 13.6 96 265-363 15-110 (126)
133 1na0_A Designed protein CTPR3; 98.6 5.2E-07 1.8E-11 66.6 12.4 93 127-220 12-105 (125)
134 3q7a_A Farnesyltransferase alp 98.6 1.7E-05 5.8E-10 69.5 23.5 215 105-326 71-329 (349)
135 2vyi_A SGTA protein; chaperone 98.6 1.1E-06 3.7E-11 65.4 14.1 119 156-278 11-129 (131)
136 3gyz_A Chaperone protein IPGC; 98.6 1.7E-07 5.9E-12 72.3 9.5 98 156-255 35-132 (151)
137 2lni_A Stress-induced-phosphop 98.6 9.9E-07 3.4E-11 66.0 13.3 97 157-255 16-112 (133)
138 2lni_A Stress-induced-phosphop 98.6 7.9E-07 2.7E-11 66.6 12.4 116 124-241 16-132 (133)
139 2uy1_A Cleavage stimulation fa 98.6 5.8E-05 2E-09 70.4 27.2 205 174-398 196-412 (493)
140 2e2e_A Formate-dependent nitri 98.6 1.4E-06 4.8E-11 69.2 14.2 122 238-364 21-145 (177)
141 2e2e_A Formate-dependent nitri 98.6 2.5E-07 8.5E-12 73.6 9.6 118 101-221 23-144 (177)
142 2uy1_A Cleavage stimulation fa 98.6 7.1E-05 2.4E-09 69.8 27.3 313 70-396 31-380 (493)
143 2vyi_A SGTA protein; chaperone 98.6 2.8E-06 9.5E-11 63.1 14.8 119 263-386 12-130 (131)
144 2vgx_A Chaperone SYCD; alterna 98.6 3.4E-07 1.2E-11 70.6 9.7 98 156-255 20-117 (148)
145 4f3v_A ESX-1 secretion system 98.6 4.3E-06 1.5E-10 70.8 16.8 197 169-376 18-247 (282)
146 1p5q_A FKBP52, FK506-binding p 98.5 2E-06 6.8E-11 76.2 15.4 138 226-389 146-283 (336)
147 2vgx_A Chaperone SYCD; alterna 98.5 1E-06 3.4E-11 67.9 11.6 99 262-363 20-118 (148)
148 2kck_A TPR repeat; tetratricop 98.5 2.5E-06 8.4E-11 61.5 13.0 100 298-400 5-107 (112)
149 2fbn_A 70 kDa peptidylprolyl i 98.5 4.4E-07 1.5E-11 73.7 9.6 149 131-283 11-176 (198)
150 1p5q_A FKBP52, FK506-binding p 98.5 3.5E-06 1.2E-10 74.6 16.0 151 138-292 127-293 (336)
151 4b4t_Q 26S proteasome regulato 98.5 5.1E-06 1.8E-10 76.2 17.3 161 164-325 11-201 (434)
152 1elw_A TPR1-domain of HOP; HOP 98.5 8.5E-06 2.9E-10 59.2 14.8 97 157-255 4-100 (118)
153 3sz7_A HSC70 cochaperone (SGT) 98.5 3.2E-06 1.1E-10 66.2 13.2 99 156-256 10-108 (164)
154 2xcb_A PCRH, regulatory protei 98.5 2.3E-06 7.7E-11 65.3 11.9 107 147-255 7-114 (142)
155 4b4t_Q 26S proteasome regulato 98.4 4.9E-05 1.7E-09 69.6 22.6 198 95-293 11-245 (434)
156 3upv_A Heat shock protein STI1 98.4 5.1E-06 1.7E-10 61.7 13.2 96 158-255 5-100 (126)
157 1elw_A TPR1-domain of HOP; HOP 98.4 4.6E-06 1.6E-10 60.7 12.4 97 88-186 4-101 (118)
158 2xcb_A PCRH, regulatory protei 98.4 1.8E-06 6.1E-11 65.9 10.2 100 262-364 17-116 (142)
159 3dss_A Geranylgeranyl transfer 98.4 0.00015 5E-09 63.3 22.9 235 99-364 40-305 (331)
160 4gcn_A Protein STI-1; structur 98.4 6.6E-06 2.3E-10 61.3 12.4 97 158-255 9-111 (127)
161 3upv_A Heat shock protein STI1 98.4 8E-06 2.7E-10 60.6 12.8 96 264-362 5-100 (126)
162 3ro3_A PINS homolog, G-protein 98.4 1.1E-05 3.7E-10 62.4 14.1 133 265-398 11-157 (164)
163 3sz7_A HSC70 cochaperone (SGT) 98.4 8.3E-06 2.8E-10 63.8 13.4 96 265-363 13-108 (164)
164 3q49_B STIP1 homology and U bo 98.4 8.6E-06 2.9E-10 61.3 12.7 99 155-255 7-105 (137)
165 3dss_A Geranylgeranyl transfer 98.4 0.00077 2.6E-08 58.7 26.4 181 208-398 90-303 (331)
166 2dba_A Smooth muscle cell asso 98.3 1.1E-05 3.6E-10 61.5 13.2 97 156-255 27-127 (148)
167 1elr_A TPR2A-domain of HOP; HO 98.3 6.5E-06 2.2E-10 61.1 11.6 98 157-255 4-107 (131)
168 3q49_B STIP1 homology and U bo 98.3 1.5E-05 5E-10 60.0 13.7 101 260-363 6-106 (137)
169 1hxi_A PEX5, peroxisome target 98.3 8E-06 2.7E-10 60.3 11.7 100 300-404 18-117 (121)
170 2kck_A TPR repeat; tetratricop 98.3 7.7E-06 2.6E-10 58.8 11.3 99 156-255 5-105 (112)
171 2fbn_A 70 kDa peptidylprolyl i 98.3 1.4E-05 4.7E-10 64.7 13.9 175 200-400 12-187 (198)
172 2dba_A Smooth muscle cell asso 98.3 3.1E-05 1.1E-09 58.8 15.1 98 123-221 27-128 (148)
173 1elr_A TPR2A-domain of HOP; HO 98.3 2.3E-06 7.7E-11 63.7 8.4 96 89-186 5-108 (131)
174 4gcn_A Protein STI-1; structur 98.3 2.9E-05 9.8E-10 57.8 14.0 50 233-284 14-63 (127)
175 1kt0_A FKBP51, 51 kDa FK506-bi 98.2 1.9E-05 6.4E-10 73.1 14.6 150 139-292 249-414 (457)
176 1hxi_A PEX5, peroxisome target 98.2 1.4E-05 4.7E-10 59.0 11.2 94 160-255 20-113 (121)
177 3k9i_A BH0479 protein; putativ 98.2 6.7E-06 2.3E-10 60.2 8.3 87 276-364 3-91 (117)
178 2xev_A YBGF; tetratricopeptide 98.2 5E-05 1.7E-09 56.3 13.4 97 267-364 6-106 (129)
179 3ro3_A PINS homolog, G-protein 98.2 1.8E-05 6.2E-10 61.1 11.3 26 337-362 132-157 (164)
180 3k9i_A BH0479 protein; putativ 98.2 2.9E-06 1E-10 62.2 6.2 85 170-255 3-89 (117)
181 2xev_A YBGF; tetratricopeptide 98.1 0.00011 3.8E-09 54.3 14.5 93 162-255 7-104 (129)
182 1ihg_A Cyclophilin 40; ppiase 98.1 4.4E-05 1.5E-09 68.4 13.6 125 157-284 223-362 (370)
183 3rkv_A Putative peptidylprolyl 98.1 1.8E-05 6.1E-10 61.7 9.7 98 157-255 11-125 (162)
184 1kt0_A FKBP51, 51 kDa FK506-bi 98.1 4.6E-05 1.6E-09 70.5 13.7 125 227-354 268-405 (457)
185 1wao_1 Serine/threonine protei 98.1 2.8E-05 9.5E-10 72.3 12.3 120 164-288 13-134 (477)
186 1ihg_A Cyclophilin 40; ppiase 98.0 3.3E-05 1.1E-09 69.2 11.4 139 89-248 224-362 (370)
187 3rkv_A Putative peptidylprolyl 98.0 6E-05 2E-09 58.6 11.4 100 263-364 11-127 (162)
188 1dce_A Protein (RAB geranylger 98.0 0.00019 6.6E-09 68.0 16.5 173 103-281 44-244 (567)
189 1wao_1 Serine/threonine protei 98.0 2.4E-05 8.1E-10 72.7 10.0 88 237-328 16-103 (477)
190 2hr2_A Hypothetical protein; a 98.0 0.0002 6.8E-09 54.8 12.6 97 302-398 14-130 (159)
191 3n71_A Histone lysine methyltr 97.9 5.9E-05 2E-09 69.9 11.2 99 157-255 351-463 (490)
192 2if4_A ATFKBP42; FKBP-like, al 97.9 5.6E-05 1.9E-09 66.8 10.0 148 157-327 179-327 (338)
193 2hr2_A Hypothetical protein; a 97.9 8.8E-05 3E-09 56.8 9.1 107 89-219 12-129 (159)
194 3n71_A Histone lysine methyltr 97.8 7.5E-05 2.6E-09 69.1 10.2 124 169-293 321-464 (490)
195 1klx_A Cysteine rich protein B 97.8 0.00031 1.1E-08 53.0 12.0 111 102-222 9-127 (138)
196 1dce_A Protein (RAB geranylger 97.8 0.00099 3.4E-08 63.1 18.0 139 243-388 89-244 (567)
197 2l6j_A TPR repeat-containing p 97.8 2.5E-05 8.4E-10 56.2 5.4 92 156-250 3-101 (111)
198 2if4_A ATFKBP42; FKBP-like, al 97.8 2.5E-05 8.6E-10 69.1 6.2 94 159-255 232-327 (338)
199 2kat_A Uncharacterized protein 97.8 0.00013 4.5E-09 52.9 8.5 78 176-255 4-81 (115)
200 2kat_A Uncharacterized protein 97.7 0.00023 7.9E-09 51.5 8.6 64 298-362 18-81 (115)
201 2l6j_A TPR repeat-containing p 97.7 0.00041 1.4E-08 49.6 9.9 92 190-284 2-99 (111)
202 1na3_A Designed protein CTPR2; 97.6 0.00066 2.3E-08 46.4 10.4 64 157-221 9-72 (91)
203 3ly7_A Transcriptional activat 97.6 0.0028 9.6E-08 55.5 15.7 134 82-220 188-338 (372)
204 1klx_A Cysteine rich protein B 97.6 0.0017 5.8E-08 48.8 12.7 109 242-363 10-126 (138)
205 1na3_A Designed protein CTPR2; 97.6 0.00096 3.3E-08 45.5 10.5 82 299-383 9-90 (91)
206 3ma5_A Tetratricopeptide repea 97.5 0.00039 1.3E-08 48.9 8.1 64 298-362 6-69 (100)
207 1zu2_A Mitochondrial import re 97.5 0.00062 2.1E-08 52.0 9.5 109 99-235 13-132 (158)
208 1zu2_A Mitochondrial import re 97.5 0.00014 4.8E-09 55.5 5.2 88 273-363 12-120 (158)
209 3mkq_A Coatomer beta'-subunit; 97.4 0.026 8.9E-07 56.0 22.6 118 135-284 610-728 (814)
210 3ma5_A Tetratricopeptide repea 97.4 0.0005 1.7E-08 48.4 7.2 65 155-220 5-69 (100)
211 3qww_A SET and MYND domain-con 97.0 0.0037 1.3E-07 56.8 10.1 88 311-398 310-410 (433)
212 3qww_A SET and MYND domain-con 97.0 0.0015 5.1E-08 59.4 7.4 83 137-219 311-409 (433)
213 3qwp_A SET and MYND domain-con 97.0 0.003 1E-07 57.5 9.2 62 157-218 329-397 (429)
214 3qwp_A SET and MYND domain-con 96.9 0.0068 2.3E-07 55.1 11.1 93 306-398 294-399 (429)
215 2kc7_A BFR218_protein; tetratr 96.9 0.0025 8.5E-08 44.4 6.4 59 305-364 6-65 (99)
216 3ly7_A Transcriptional activat 96.9 0.028 9.5E-07 49.3 14.0 73 296-373 274-346 (372)
217 2kc7_A BFR218_protein; tetratr 96.8 0.0039 1.3E-07 43.3 7.1 57 164-221 7-64 (99)
218 1wy6_A Hypothetical protein ST 96.8 0.083 2.9E-06 38.5 14.7 67 333-401 90-156 (172)
219 1pc2_A Mitochondria fission pr 96.7 0.014 4.6E-07 44.1 9.4 82 279-363 14-100 (152)
220 3mkq_A Coatomer beta'-subunit; 96.7 0.17 5.9E-06 50.0 20.4 45 168-218 663-707 (814)
221 1wy6_A Hypothetical protein ST 96.4 0.17 6E-06 36.9 13.0 120 100-224 19-157 (172)
222 3bee_A Putative YFRE protein; 96.2 0.045 1.6E-06 37.6 9.2 65 156-221 5-72 (93)
223 2v5f_A Prolyl 4-hydroxylase su 96.2 0.031 1E-06 39.3 8.4 65 300-364 6-76 (104)
224 3bee_A Putative YFRE protein; 96.1 0.13 4.4E-06 35.2 10.9 67 189-256 3-72 (93)
225 3lvg_A Clathrin heavy chain 1; 95.9 2.9E-06 1E-10 75.8 -16.7 264 87-395 53-316 (624)
226 3mkq_B Coatomer subunit alpha; 95.9 0.44 1.5E-05 36.8 14.0 102 133-253 14-115 (177)
227 3mkq_B Coatomer subunit alpha; 95.8 0.46 1.6E-05 36.7 17.5 98 203-323 16-113 (177)
228 1nzn_A CGI-135 protein, fissio 95.7 0.055 1.9E-06 39.2 8.0 66 297-363 33-103 (126)
229 2v5f_A Prolyl 4-hydroxylase su 95.5 0.16 5.5E-06 35.5 9.8 27 228-254 47-73 (104)
230 4b4t_P 26S proteasome regulato 95.2 1.8 6.2E-05 39.4 19.3 183 171-359 30-243 (445)
231 4ady_A RPN2, 26S proteasome re 95.2 1.3 4.4E-05 44.0 17.7 258 133-398 383-657 (963)
232 1pc2_A Mitochondria fission pr 95.1 0.37 1.3E-05 36.2 10.9 83 243-328 14-100 (152)
233 4h7y_A Dual specificity protei 94.9 0.33 1.1E-05 36.2 9.9 102 261-364 11-124 (161)
234 3u64_A Protein TP_0956; tetrat 94.8 1.6 5.5E-05 36.8 21.1 125 138-265 135-279 (301)
235 4b4t_P 26S proteasome regulato 94.6 2.5 8.6E-05 38.4 20.0 255 137-395 29-320 (445)
236 4h7y_A Dual specificity protei 93.9 1.4 4.9E-05 32.8 12.6 103 226-332 12-127 (161)
237 4gns_B Protein CSD3, chitin bi 93.6 0.41 1.4E-05 46.4 10.4 52 272-325 346-397 (754)
238 2ff4_A Probable regulatory pro 93.6 0.2 6.7E-06 44.8 7.8 60 301-361 173-232 (388)
239 4fhn_B Nucleoporin NUP120; pro 93.5 4.8 0.00016 41.6 18.8 144 92-243 816-987 (1139)
240 4ady_A RPN2, 26S proteasome re 93.2 1.4 4.9E-05 43.7 13.5 251 100-362 386-657 (963)
241 1nzn_A CGI-135 protein, fissio 93.1 0.93 3.2E-05 32.8 9.1 80 316-398 18-102 (126)
242 3u64_A Protein TP_0956; tetrat 93.1 0.55 1.9E-05 39.6 9.0 67 264-331 200-272 (301)
243 3o48_A Mitochondria fission 1 92.9 1.3 4.3E-05 32.3 9.6 69 294-362 35-106 (134)
244 4fhn_B Nucleoporin NUP120; pro 92.7 5.3 0.00018 41.3 17.7 51 130-183 818-868 (1139)
245 3lvg_A Clathrin heavy chain 1; 92.6 9.9E-05 3.4E-09 66.2 -14.7 269 51-360 49-317 (624)
246 4gns_B Protein CSD3, chitin bi 92.6 1.4 4.9E-05 42.7 12.4 51 344-396 347-397 (754)
247 2ff4_A Probable regulatory pro 92.3 0.66 2.2E-05 41.4 9.3 68 197-265 176-247 (388)
248 3txn_A 26S proteasome regulato 91.6 6.9 0.00024 34.7 16.9 93 304-396 104-207 (394)
249 1v54_E Cytochrome C oxidase po 91.0 2 7E-05 29.4 8.2 48 173-220 26-73 (109)
250 2uwj_G Type III export protein 90.6 2.9 9.9E-05 28.5 9.5 87 102-196 20-106 (115)
251 2p58_C Putative type III secre 90.3 3.1 0.00011 28.4 9.3 87 102-196 21-107 (116)
252 1v54_E Cytochrome C oxidase po 90.1 2.1 7.3E-05 29.3 7.7 63 314-378 25-87 (109)
253 1y8m_A FIS1; mitochondria, unk 89.8 4.7 0.00016 29.8 11.8 68 296-363 36-106 (144)
254 3ffl_A Anaphase-promoting comp 89.2 4.9 0.00017 30.6 9.9 25 372-396 124-148 (167)
255 1qsa_A Protein (soluble lytic 88.2 18 0.00062 34.3 23.8 251 128-398 76-347 (618)
256 2y69_E Cytochrome C oxidase su 87.5 4.7 0.00016 29.3 8.3 63 172-235 68-130 (152)
257 2y69_E Cytochrome C oxidase su 86.2 4.5 0.00015 29.4 7.7 63 314-378 68-130 (152)
258 1zbp_A Hypothetical protein VP 85.6 8.2 0.00028 32.0 10.1 56 165-221 5-60 (273)
259 1y8m_A FIS1; mitochondria, unk 84.3 10 0.00036 27.9 10.8 66 155-220 37-105 (144)
260 3txn_A 26S proteasome regulato 84.1 22 0.00076 31.5 22.8 163 127-291 22-208 (394)
261 1wdy_A 2-5A-dependent ribonucl 84.0 6.2 0.00021 32.7 9.4 88 310-406 190-282 (285)
262 3ffl_A Anaphase-promoting comp 81.5 7.5 0.00026 29.5 7.7 29 89-117 64-92 (167)
263 4b4t_R RPN7, 26S proteasome re 80.6 32 0.0011 30.9 15.3 98 265-363 133-237 (429)
264 3esl_A Checkpoint serine/threo 79.7 20 0.0007 28.1 10.6 55 313-368 93-148 (202)
265 3o48_A Mitochondria fission 1 78.9 16 0.00055 26.5 10.8 46 352-398 61-106 (134)
266 4b4t_R RPN7, 26S proteasome re 78.8 16 0.00055 32.9 10.6 99 300-398 132-236 (429)
267 1zbp_A Hypothetical protein VP 77.8 23 0.00077 29.4 10.0 116 235-363 5-129 (273)
268 1wdy_A 2-5A-dependent ribonucl 76.1 13 0.00046 30.5 8.9 119 234-358 152-274 (285)
269 3esl_A Checkpoint serine/threo 76.0 27 0.00091 27.5 10.2 70 157-227 80-150 (202)
270 4b4t_S RPN3, 26S proteasome re 75.7 20 0.00067 33.0 10.0 65 157-221 231-299 (523)
271 4b4t_S RPN3, 26S proteasome re 74.6 53 0.0018 30.2 12.6 66 191-256 230-299 (523)
272 3lpz_A GET4 (YOR164C homolog); 74.5 41 0.0014 28.9 20.6 169 125-327 36-215 (336)
273 3eiq_C Programmed cell death p 74.4 27 0.00093 30.4 10.3 27 159-185 56-82 (358)
274 1n11_A Ankyrin; clathrin, BAND 73.8 33 0.0011 30.6 11.4 72 73-150 60-136 (437)
275 3eu9_A Huntingtin-interacting 73.3 21 0.0007 28.4 9.1 14 135-148 17-30 (240)
276 1s6c_A KV4 potassium channel-i 73.1 25 0.00087 26.6 9.2 32 85-116 35-67 (183)
277 2uwj_G Type III export protein 71.6 21 0.00073 24.4 7.8 46 344-396 49-94 (115)
278 2p58_C Putative type III secre 71.0 22 0.00076 24.3 8.5 49 309-363 50-98 (116)
279 1n11_A Ankyrin; clathrin, BAND 70.6 28 0.00096 31.1 10.1 103 73-181 27-134 (437)
280 2zu6_B Programmed cell death p 70.1 50 0.0017 28.0 11.0 64 266-331 169-234 (307)
281 3hra_A Ankyrin repeat family p 68.9 9.6 0.00033 29.6 5.9 15 319-333 158-172 (201)
282 1k1a_A B-cell lymphoma 3-encod 68.4 38 0.0013 26.9 9.7 26 165-190 14-39 (241)
283 1k1a_A B-cell lymphoma 3-encod 65.0 43 0.0015 26.5 9.4 16 133-148 15-30 (241)
284 4a1g_A Mitotic checkpoint seri 64.9 41 0.0014 25.1 9.5 49 316-364 82-131 (152)
285 2jul_A Calsenilin; EF-hand, ca 64.3 49 0.0017 26.9 9.6 111 141-253 129-255 (256)
286 2wvi_A Mitotic checkpoint seri 63.8 36 0.0012 25.8 7.7 54 316-370 77-131 (164)
287 3kea_A K1L; tropism, ANK repea 62.6 65 0.0022 26.6 10.3 199 136-355 8-213 (285)
288 4aez_C MAD3, mitotic spindle c 59.6 47 0.0016 26.6 8.0 53 315-368 130-183 (223)
289 4g8k_A 2-5A-dependent ribonucl 59.6 81 0.0028 26.7 12.1 151 235-405 173-329 (337)
290 2d2s_A Exocyst complex compone 57.7 63 0.0022 26.1 8.8 88 163-253 24-117 (235)
291 3lpz_A GET4 (YOR164C homolog); 57.3 94 0.0032 26.7 19.8 22 341-362 194-215 (336)
292 2nsz_A Programmed cell death p 57.0 42 0.0014 24.1 6.9 64 160-224 10-75 (129)
293 3kea_A K1L; tropism, ANK repea 56.7 43 0.0015 27.8 8.1 17 132-148 67-83 (285)
294 4a1g_A Mitotic checkpoint seri 56.6 59 0.002 24.2 10.2 51 176-226 84-135 (152)
295 2wpv_A GET4, UPF0363 protein Y 56.0 95 0.0032 26.4 20.5 128 215-362 80-216 (312)
296 2zu6_B Programmed cell death p 56.0 94 0.0032 26.4 10.7 26 160-185 6-31 (307)
297 2d2s_A Exocyst complex compone 54.6 51 0.0018 26.7 7.7 24 93-116 23-46 (235)
298 1qsa_A Protein (soluble lytic 54.3 1.5E+02 0.0051 28.1 30.1 97 306-407 388-487 (618)
299 3eu9_A Huntingtin-interacting 51.0 27 0.00091 27.7 5.7 17 132-148 81-97 (240)
300 2ion_A PDCD4, programmed cell 50.1 34 0.0012 25.5 5.5 64 160-224 12-77 (152)
301 4aez_C MAD3, mitotic spindle c 50.0 96 0.0033 24.8 8.3 53 174-226 131-184 (223)
302 2wvi_A Mitotic checkpoint seri 49.8 81 0.0028 23.8 10.2 52 176-227 79-131 (164)
303 2fe3_A Peroxide operon regulat 47.1 77 0.0026 23.2 7.2 64 75-140 9-72 (145)
304 2jul_A Calsenilin; EF-hand, ca 46.8 66 0.0023 26.1 7.5 151 66-218 87-255 (256)
305 1s1e_A KV channel interacting 46.6 1.1E+02 0.0036 24.2 9.9 10 209-218 173-182 (224)
306 1ug3_A EIF4GI, eukaryotic prot 46.5 48 0.0016 28.6 6.8 61 127-187 14-76 (339)
307 3hra_A Ankyrin repeat family p 45.6 97 0.0033 23.5 8.7 17 134-150 12-28 (201)
308 3ljn_A Hypothetical protein; a 45.5 58 0.002 28.0 7.4 46 310-359 219-266 (364)
309 2fe3_A Peroxide operon regulat 45.1 85 0.0029 23.0 7.1 60 218-279 13-72 (145)
310 4ets_A Ferric uptake regulatio 44.8 81 0.0028 23.7 7.1 58 292-350 26-85 (162)
311 2r9g_A AAA ATPase, central reg 44.1 1.1E+02 0.0039 23.9 9.9 68 195-264 14-89 (204)
312 3ygs_P Procaspase 9; apoptosis 43.6 46 0.0016 22.5 5.0 64 74-144 25-88 (97)
313 2b7e_A PRE-mRNA processing pro 42.7 30 0.001 21.0 3.3 32 70-101 3-35 (59)
314 1oai_A Nuclear RNA export fact 41.5 19 0.00064 21.9 2.4 25 101-125 33-57 (59)
315 1mzb_A Ferric uptake regulatio 41.2 83 0.0028 22.7 6.5 60 218-279 9-69 (136)
316 2xig_A Ferric uptake regulatio 41.2 86 0.0029 23.1 6.6 46 233-279 32-77 (150)
317 3jxi_A Vanilloid receptor-rela 41.0 35 0.0012 27.6 5.0 19 343-361 231-249 (260)
318 3eyy_A Putative iron uptake re 40.1 81 0.0028 23.1 6.3 35 243-278 33-67 (145)
319 3twr_A Tankyrase-2; ankyrin re 39.5 60 0.002 23.8 5.7 110 235-358 13-129 (165)
320 1s6c_A KV4 potassium channel-i 39.1 98 0.0034 23.1 7.1 24 193-216 157-180 (183)
321 2fu4_A Ferric uptake regulatio 39.0 75 0.0026 20.3 6.6 62 77-140 6-68 (83)
322 3ygs_P Procaspase 9; apoptosis 38.8 60 0.0021 21.9 5.0 13 174-186 54-66 (97)
323 3lxu_X Tripeptidyl-peptidase 2 38.4 3.3E+02 0.011 28.6 12.0 86 315-405 1265-1351(1354)
324 2fu4_A Ferric uptake regulatio 38.2 77 0.0026 20.2 6.1 29 211-239 36-64 (83)
325 4gq2_M Nucleoporin NUP120; bet 38.1 3.3E+02 0.011 27.4 12.3 131 198-348 816-950 (950)
326 1mzb_A Ferric uptake regulatio 37.9 1E+02 0.0035 22.1 6.5 62 78-141 8-70 (136)
327 3utm_A Tankyrase-1; tankyrase, 37.3 1.8E+02 0.0063 24.3 10.7 111 95-215 28-144 (351)
328 3ltm_A Alpha-REP4; protein eng 37.2 1.4E+02 0.0048 23.0 19.0 153 86-254 31-183 (211)
329 2w57_A Ferric uptake regulatio 37.2 98 0.0034 22.8 6.4 64 76-141 5-69 (150)
330 2ion_A PDCD4, programmed cell 36.9 1.3E+02 0.0043 22.4 8.1 62 127-188 12-76 (152)
331 4g8k_A 2-5A-dependent ribonucl 36.7 1.9E+02 0.0065 24.3 11.0 85 269-370 242-329 (337)
332 3aji_A 26S proteasome non-ATPa 35.9 1E+02 0.0035 24.0 7.0 155 233-406 9-168 (231)
333 2w57_A Ferric uptake regulatio 35.2 94 0.0032 22.9 6.0 60 218-279 8-68 (150)
334 3eiq_C Programmed cell death p 35.1 2.2E+02 0.0077 24.7 16.6 64 266-331 220-285 (358)
335 3b7b_A Euchromatic histone-lys 34.8 62 0.0021 25.6 5.4 19 131-149 81-99 (237)
336 1bpo_A Protein (clathrin); cla 34.6 2.6E+02 0.009 25.3 13.4 141 241-397 343-483 (494)
337 3utm_A Tankyrase-1; tankyrase, 33.8 2.1E+02 0.0071 23.9 13.0 111 130-251 27-145 (351)
338 3dd4_A KV channel-interacting 33.8 75 0.0025 25.3 5.7 131 84-216 80-226 (229)
339 3bu8_A Telomeric repeat-bindin 33.5 1.3E+02 0.0046 23.8 6.5 22 165-186 122-143 (235)
340 1y1x_A Leishmania major homolo 33.4 1.6E+02 0.0054 22.3 9.5 12 173-184 128-139 (191)
341 3twr_A Tankyrase-2; ankyrin re 33.3 1.3E+02 0.0043 22.0 6.7 18 132-149 13-30 (165)
342 3ljn_A Hypothetical protein; a 33.2 1.5E+02 0.005 25.4 8.0 98 155-262 16-115 (364)
343 3bge_A Predicted ATPase; struc 32.6 1.8E+02 0.0061 22.8 9.3 47 196-242 8-57 (201)
344 2wpv_A GET4, UPF0363 protein Y 32.5 2.3E+02 0.0079 24.0 22.6 114 125-251 34-158 (312)
345 2f6m_A Suppressor protein STP2 31.8 93 0.0032 19.2 5.7 49 90-140 4-52 (65)
346 3v30_A DNA-binding protein rfx 31.4 1E+02 0.0034 22.8 5.9 150 234-398 6-160 (172)
347 2o03_A Probable zinc uptake re 30.9 75 0.0026 22.7 4.7 47 304-350 15-61 (131)
348 2yru_A Steroid receptor RNA ac 30.7 1E+02 0.0035 21.8 5.1 42 179-220 48-89 (118)
349 2rg8_A Programmed cell death p 30.6 1.5E+02 0.0052 22.3 6.5 25 161-185 14-38 (165)
350 2p1h_A APAF-1, apoptotic prote 30.5 1.2E+02 0.004 20.1 8.1 66 72-146 24-89 (94)
351 3kae_A CDC27, possible protein 30.3 1.8E+02 0.0063 22.2 6.7 23 337-359 117-139 (242)
352 3us6_A Histidine-containing ph 29.9 1.7E+02 0.0058 21.7 9.0 22 234-255 100-121 (153)
353 4ets_A Ferric uptake regulatio 29.4 1.6E+02 0.0056 22.0 6.5 63 76-140 21-85 (162)
354 3kae_A CDC27, possible protein 29.0 2E+02 0.0067 22.1 7.6 106 126-253 34-140 (242)
355 3sjs_A URE3-BP sequence specif 28.8 2E+02 0.0068 22.5 7.4 10 105-114 87-96 (220)
356 2xig_A Ferric uptake regulatio 28.8 1.7E+02 0.0059 21.4 7.0 47 304-350 31-77 (150)
357 1bd8_A P19INK4D CDK4/6 inhibit 28.7 74 0.0025 23.0 4.6 17 133-149 8-24 (156)
358 2znd_A Programmed cell death p 28.7 1.4E+02 0.0047 22.0 6.3 10 174-183 110-119 (172)
359 3eyy_A Putative iron uptake re 28.5 1.5E+02 0.0052 21.6 6.1 44 305-349 24-67 (145)
360 2pnn_A Transient receptor pote 28.2 57 0.002 26.6 4.2 19 168-186 21-39 (273)
361 1jba_A GCAP-2, protein (guanyl 28.0 2E+02 0.0069 21.9 7.4 12 193-204 165-176 (204)
362 2nsz_A Programmed cell death p 27.8 1.7E+02 0.0057 20.9 9.5 62 127-188 10-74 (129)
363 3mwm_A ZUR, putative metal upt 27.8 69 0.0023 23.3 4.1 47 304-350 18-64 (139)
364 3ctd_A Putative ATPase, AAA fa 26.8 2.4E+02 0.0081 22.3 10.4 71 193-264 33-111 (213)
365 1alv_A Calpain, S-camld; calci 26.4 1.9E+02 0.0066 21.2 11.2 15 84-98 18-32 (173)
366 3b7b_A Euchromatic histone-lys 26.2 2.2E+02 0.0075 22.1 7.4 16 382-397 219-234 (237)
367 2keb_A DNA polymerase subunit 25.9 1.6E+02 0.0054 20.0 7.7 62 67-130 23-88 (101)
368 3e3v_A Regulatory protein RECX 25.8 2.2E+02 0.0075 21.6 7.5 13 176-188 52-64 (177)
369 3jxi_A Vanilloid receptor-rela 25.6 1.1E+02 0.0039 24.4 5.6 19 340-358 143-161 (260)
370 1zl8_A LIN-7; heterodimer, alp 25.3 37 0.0013 19.6 1.6 20 101-120 6-25 (53)
371 4fke_A Aminopeptidase N; zinc 25.2 5.2E+02 0.018 25.8 16.3 183 92-275 690-879 (909)
372 3f6q_A Integrin-linked protein 24.9 1.6E+02 0.0056 21.7 6.1 150 235-406 10-167 (179)
373 3bu8_A Telomeric repeat-bindin 24.7 2.6E+02 0.009 22.2 8.2 21 235-255 122-142 (235)
374 3ltj_A Alpharep-4; protein eng 24.3 2.3E+02 0.008 21.4 18.7 175 121-315 25-199 (201)
375 2o03_A Probable zinc uptake re 24.2 1.1E+02 0.0036 21.9 4.5 33 208-240 26-58 (131)
376 1wgl_A TOLL-interacting protei 24.1 78 0.0027 19.1 3.1 20 171-190 37-56 (59)
377 2d8n_A Recoverin; structural g 24.1 93 0.0032 24.0 4.6 8 107-114 73-80 (207)
378 2r9g_A AAA ATPase, central reg 23.6 2.7E+02 0.0091 21.8 8.9 62 161-223 15-84 (204)
379 3f3f_C Nucleoporin NUP85; stru 22.3 4E+02 0.014 24.9 8.6 74 241-318 495-568 (570)
380 3aji_A 26S proteasome non-ATPa 22.2 2.7E+02 0.0093 21.4 8.8 19 164-182 10-28 (231)
381 3mwm_A ZUR, putative metal upt 21.9 95 0.0032 22.5 3.9 43 235-278 21-63 (139)
382 2f8y_A Notch homolog 1, transl 21.7 2.7E+02 0.0091 21.3 7.0 22 380-405 198-219 (223)
383 1ixm_A SPO0B, protein (sporula 21.6 1.6E+02 0.0054 22.9 5.3 49 303-360 36-84 (192)
384 2bbr_A Viral CAsp8 and FADD-li 21.5 2.9E+02 0.0099 21.5 7.7 39 317-356 135-173 (195)
385 3l6a_A Eukaryotic translation 21.4 4E+02 0.014 23.1 11.8 59 127-187 15-78 (364)
386 2ko4_A Mediator of RNA polymer 21.3 96 0.0033 19.9 3.1 38 145-182 24-61 (81)
387 3f3f_C Nucleoporin NUP85; stru 21.1 1.3E+02 0.0046 27.9 5.3 87 300-389 480-568 (570)
388 4fjo_A DNA repair protein REV1 20.7 2E+02 0.0068 19.3 5.2 46 70-115 12-60 (97)
389 2p22_A Suppressor protein STP2 20.5 2.7E+02 0.0092 21.2 6.0 56 86-143 109-164 (174)
390 3ltm_A Alpha-REP4; protein eng 20.4 2.9E+02 0.0099 21.0 20.1 60 298-362 125-184 (211)
391 2l2e_A Calcium-binding protein 20.4 2.7E+02 0.0093 20.7 9.0 31 68-98 23-55 (190)
392 2p1h_A APAF-1, apoptotic prote 20.3 1.9E+02 0.0066 19.0 5.4 10 141-150 53-62 (94)
No 1
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=100.00 E-value=4.1e-33 Score=260.23 Aligned_cols=204 Identities=12% Similarity=0.077 Sum_probs=176.0
Q ss_pred HHHHHHhcCCCCC--C-CHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCC---------HH
Q 015370 142 SGERYFEGLPLSA--K-TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ---------VE 209 (408)
Q Consensus 142 ~a~~~~~~~~~~~--~-~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~---------~~ 209 (408)
.+..+.+++...+ . ....++.+|++|++.|++++|+++|++|.+.|++||..|||+||.+|++.+. ++
T Consensus 8 ~~e~L~~~~~~k~~~~spe~~l~~~id~c~k~G~~~~A~~lf~~M~~~Gv~pd~~tyn~Li~~c~~~~~~~~~~~~~~l~ 87 (501)
T 4g26_A 8 PSENLSRKAKKKAIQQSPEALLKQKLDMCSKKGDVLEALRLYDEARRNGVQLSQYHYNVLLYVCSLAEAATESSPNPGLS 87 (501)
T ss_dssp ----------------CHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTCCCCSSSSCCHHHH
T ss_pred hHHHHHHHHHHhcccCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCCHhHHHHHHHHHHhCCchhhhhhcchHH
Confidence 3444555555442 2 2456888899999999999999999999999999999999999999987654 78
Q ss_pred HHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHH
Q 015370 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVE 289 (408)
Q Consensus 210 ~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~ 289 (408)
+|.++|++|...|+.||..||+++|.+|++.|++++|.++|++|.+ .|+.||..+|+++|.+|++.|++++|.+ ++++
T Consensus 88 ~A~~lf~~M~~~G~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~-~g~~Pd~~tyn~lI~~~~~~g~~~~A~~-l~~~ 165 (501)
T 4g26_A 88 RGFDIFKQMIVDKVVPNEATFTNGARLAVAKDDPEMAFDMVKQMKA-FGIQPRLRSYGPALFGFCRKGDADKAYE-VDAH 165 (501)
T ss_dssp HHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHTTCHHHHHH-HHHH
T ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHH-cCCCCccceehHHHHHHHHCCCHHHHHH-HHHH
Confidence 8999999999999999999999999999999999999999999999 4999999999999999999999999999 9999
Q ss_pred HHHhcccCccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhc
Q 015370 290 AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 347 (408)
Q Consensus 290 ~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~ 347 (408)
|.+.+..||..||++||.+|++.|++++|.+++++|++.|..|+..||+.++..|+..
T Consensus 166 M~~~G~~Pd~~ty~~Li~~~~~~g~~d~A~~ll~~Mr~~g~~ps~~T~~~l~~~F~s~ 223 (501)
T 4g26_A 166 MVESEVVPEEPELAALLKVSMDTKNADKVYKTLQRLRDLVRQVSKSTFDMIEEWFKSE 223 (501)
T ss_dssp HHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSBCHHHHHHHHHHHHSH
T ss_pred HHhcCCCCCHHHHHHHHHHHhhCCCHHHHHHHHHHHHHhCCCcCHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999988764
No 2
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=100.00 E-value=4.8e-33 Score=259.78 Aligned_cols=207 Identities=12% Similarity=0.148 Sum_probs=181.7
Q ss_pred HHHHHHHHHHHhCCCCCCh-hhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCC---------H
Q 015370 174 EKAEELFERVKQSNLSFNA-LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN---------I 243 (408)
Q Consensus 174 ~~A~~~~~~m~~~~~~p~~-~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~---------~ 243 (408)
..+..+.+++.+.+..+.+ ..++.+|++|++.|++++|+++|++|.+.|+.||..||+++|.+|++.+. +
T Consensus 7 s~~e~L~~~~~~k~~~~spe~~l~~~id~c~k~G~~~~A~~lf~~M~~~Gv~pd~~tyn~Li~~c~~~~~~~~~~~~~~l 86 (501)
T 4g26_A 7 SPSENLSRKAKKKAIQQSPEALLKQKLDMCSKKGDVLEALRLYDEARRNGVQLSQYHYNVLLYVCSLAEAATESSPNPGL 86 (501)
T ss_dssp -----------------CHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTCCCCSSSSCCHHH
T ss_pred chHHHHHHHHHHhcccCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCCHhHHHHHHHHHHhCCchhhhhhcchH
Confidence 4456667778877766544 46899999999999999999999999999999999999999999987664 6
Q ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCHHHHHHHHH
Q 015370 244 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 323 (408)
Q Consensus 244 ~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~ 323 (408)
+.|.++|++|... |+.||..+|++||.+|++.|++++|.+ ++++|.+.+..||..+|+.||.+|++.|++++|.++|+
T Consensus 87 ~~A~~lf~~M~~~-G~~Pd~~tyn~lI~~~~~~g~~~~A~~-l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~ 164 (501)
T 4g26_A 87 SRGFDIFKQMIVD-KVVPNEATFTNGARLAVAKDDPEMAFD-MVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDA 164 (501)
T ss_dssp HHHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHTCHHHHHH-HHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-CCCCCHHHHHHHHHHHHhcCCHHHHHH-HHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHH
Confidence 8899999999994 999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred HHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHhc
Q 015370 324 SLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDV 383 (408)
Q Consensus 324 ~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~li~~~~~~ 383 (408)
+|.+.|+.||..||++||.+|++.|++++|.+++++|.+.+ ..|+..||+.++..|+..
T Consensus 165 ~M~~~G~~Pd~~ty~~Li~~~~~~g~~d~A~~ll~~Mr~~g-~~ps~~T~~~l~~~F~s~ 223 (501)
T 4g26_A 165 HMVESEVVPEEPELAALLKVSMDTKNADKVYKTLQRLRDLV-RQVSKSTFDMIEEWFKSE 223 (501)
T ss_dssp HHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT-SSBCHHHHHHHHHHHHSH
T ss_pred HHHhcCCCCCHHHHHHHHHHHhhCCCHHHHHHHHHHHHHhC-CCcCHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999997 689999999999999864
No 3
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.98 E-value=1.4e-29 Score=244.60 Aligned_cols=325 Identities=10% Similarity=0.008 Sum_probs=275.9
Q ss_pred CCCCcHHHHHHHHHHcCCCCChhhHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHHH
Q 015370 67 LPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERY 146 (408)
Q Consensus 67 ~~~~~a~~~l~~~~~~g~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~ 146 (408)
...+.|..+++++.. ..|+..++..++.+|.+.|++++|+++|+.+.. .+++..+++.++.+|.+.|++++|.++
T Consensus 98 g~~~~A~~~~~~~~~--~~p~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~---~~~~~~~~~~l~~~~~~~g~~~~A~~~ 172 (597)
T 2xpi_A 98 QQYKCAAFVGEKVLD--ITGNPNDAFWLAQVYCCTGDYARAKCLLTKEDL---YNRSSACRYLAAFCLVKLYDWQGALNL 172 (597)
T ss_dssp TCHHHHHHHHHHHHH--HHCCHHHHHHHHHHHHHTTCHHHHHHHHHHTCG---GGTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred cCchHHHHHHHHHHh--hCCCchHHHHHHHHHHHcCcHHHHHHHHHHHhc---cccchhHHHHHHHHHHHHhhHHHHHHH
Confidence 455678888888884 457888999999999999999999999998865 367899999999999999999999999
Q ss_pred HhcCCCCC-----------------CCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCC---------------------
Q 015370 147 FEGLPLSA-----------------KTSETYTALLHLYAGAKWTEKAEELFERVKQSNL--------------------- 188 (408)
Q Consensus 147 ~~~~~~~~-----------------~~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~--------------------- 188 (408)
|+++.... .+..+|+.++.+|.+.|++++|.++|++|.+.+.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~ 252 (597)
T 2xpi_A 173 LGETNPFRKDEKNANKLLMQDGGIKLEASMCYLRGQVYTNLSNFDRAKECYKEALMVDAKCYEAFDQLVSNHLLTADEEW 252 (597)
T ss_dssp HCSSCTTC----------CCCSSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHTTCSCHHHHH
T ss_pred HhccCCccccccccccccccccccchhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCchhhHHHHHHHHhhcccchhHH
Confidence 99644321 2588999999999999999999999999875431
Q ss_pred -------------------------------------------------CCChhhHHHHHHHHHhcCCHHHHHHHHHHHH
Q 015370 189 -------------------------------------------------SFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219 (408)
Q Consensus 189 -------------------------------------------------~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~ 219 (408)
+++..+|+.++.+|.+.|++++|..+|+++.
T Consensus 253 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~ 332 (597)
T 2xpi_A 253 DLVLKLNYSTYSKEDAAFLRSLYMLKLNKTSHEDELRRAEDYLSSINGLEKSSDLLLCKADTLFVRSRFIDVLAITTKIL 332 (597)
T ss_dssp HHHHHSCTHHHHGGGHHHHHHHHHTTSCTTTTHHHHHHHHHHHHTSTTGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHhcCCcccccchHHHHHHHHHHHHHHHcCcchHHHHHHHHHHhhcCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 2567778888888888888888888888888
Q ss_pred hCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCcc
Q 015370 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 299 (408)
Q Consensus 220 ~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 299 (408)
+.+.. +..++..++.++.+.|++++|.++++++.+ ..+.+..+++.++..|.+.|++++|.+ +++++.+.. +.+.
T Consensus 333 ~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~--~~~~~~~~~~~l~~~~~~~g~~~~A~~-~~~~~~~~~-~~~~ 407 (597)
T 2xpi_A 333 EIDPY-NLDVYPLHLASLHESGEKNKLYLISNDLVD--RHPEKAVTWLAVGIYYLCVNKISEARR-YFSKSSTMD-PQFG 407 (597)
T ss_dssp HHCTT-CCTTHHHHHHHHHHHTCHHHHHHHHHHHHH--HCTTSHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHHC-TTCH
T ss_pred HcCcc-cHHHHHHHHHHHHHhCCHHHHHHHHHHHHh--hCcccHHHHHHHHHHHHHhccHHHHHH-HHHHHHHhC-CCCH
Confidence 76533 667788888888888888888888888876 346678889999999999999999999 888887754 3367
Q ss_pred chHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHH
Q 015370 300 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGA 379 (408)
Q Consensus 300 ~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~li~~ 379 (408)
.+|+.++.+|.+.|++++|.++|+++.+.+. .+..+|..++.+|.+.|++++|.++|+++.+.. +.+..+|+.++.+
T Consensus 408 ~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~-~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~--~~~~~~~~~l~~~ 484 (597)
T 2xpi_A 408 PAWIGFAHSFAIEGEHDQAISAYTTAARLFQ-GTHLPYLFLGMQHMQLGNILLANEYLQSSYALF--QYDPLLLNELGVV 484 (597)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHTTT-TCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC--CCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc-cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCChHHHHHHHHH
Confidence 8999999999999999999999999987653 377889999999999999999999999999865 4578899999999
Q ss_pred HHhcCChHHHHHHHHHHHhc----CCCCC
Q 015370 380 FSDVGLTEKANEFHMLLLQK----NCAPT 404 (408)
Q Consensus 380 ~~~~g~~~~a~~~~~~m~~~----g~~p~ 404 (408)
|.+.|++++|.++|+++.+. +..|+
T Consensus 485 ~~~~g~~~~A~~~~~~~~~~~~~~~~~p~ 513 (597)
T 2xpi_A 485 AFNKSDMQTAINHFQNALLLVKKTQSNEK 513 (597)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHSCCCSG
T ss_pred HHHhCCHHHHHHHHHHHHHhhhccccchh
Confidence 99999999999999999876 66665
No 4
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.97 E-value=1.6e-29 Score=244.17 Aligned_cols=304 Identities=8% Similarity=-0.016 Sum_probs=187.9
Q ss_pred CChhhHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCChHHHHH------------------------------------
Q 015370 86 ATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYAT------------------------------------ 129 (408)
Q Consensus 86 ~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~------------------------------------ 129 (408)
.+..+|+.++.+|.+.|++++|+++|+++.+.+ +.+...+..
T Consensus 198 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~--p~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 275 (597)
T 2xpi_A 198 LEASMCYLRGQVYTNLSNFDRAKECYKEALMVD--AKCYEAFDQLVSNHLLTADEEWDLVLKLNYSTYSKEDAAFLRSLY 275 (597)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHTTCSCHHHHHHHHHHSCTHHHHGGGHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--chhhHHHHHHHHhhcccchhHHHHHHhcCCcccccchHHHHHHHH
Confidence 357899999999999999999999999998864 222333222
Q ss_pred --HHHHHHhhcChHHHHHHHhcCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCC-------------------
Q 015370 130 --RIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNL------------------- 188 (408)
Q Consensus 130 --li~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~------------------- 188 (408)
++..|.+.|++++|.++|+++...+++..+|+.++.+|.+.|++++|.++|+++.+.+.
T Consensus 276 ~~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 355 (597)
T 2xpi_A 276 MLKLNKTSHEDELRRAEDYLSSINGLEKSSDLLLCKADTLFVRSRFIDVLAITTKILEIDPYNLDVYPLHLASLHESGEK 355 (597)
T ss_dssp HTTSCTTTTHHHHHHHHHHHHTSTTGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCCTTHHHHHHHHHHHTCH
T ss_pred HHHHHHHcCcchHHHHHHHHHHhhcCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHhCCH
Confidence 24455677888888888888877667888888888888888888888888888876541
Q ss_pred --------------CCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHh
Q 015370 189 --------------SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 254 (408)
Q Consensus 189 --------------~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~ 254 (408)
+.+..+|+.++.+|.+.|++++|.++|+++.+... .+..+|+.++.+|.+.|++++|.++|+++.
T Consensus 356 ~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~-~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~ 434 (597)
T 2xpi_A 356 NKLYLISNDLVDRHPEKAVTWLAVGIYYLCVNKISEARRYFSKSSTMDP-QFGPAWIGFAHSFAIEGEHDQAISAYTTAA 434 (597)
T ss_dssp HHHHHHHHHHHHHCTTSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 22344555555555555555555555555544321 134455555555555555555555555555
Q ss_pred cCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCHHHHHHHHHHHHhc----cC
Q 015370 255 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT----KQ 330 (408)
Q Consensus 255 ~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~----~~ 330 (408)
+. .+.+..+|..++.+|.+.|++++|.+ ++..+.+..+. +..+|+.++..|.+.|++++|.++|+++.+. +.
T Consensus 435 ~~--~~~~~~~~~~l~~~~~~~g~~~~A~~-~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~ 510 (597)
T 2xpi_A 435 RL--FQGTHLPYLFLGMQHMQLGNILLANE-YLQSSYALFQY-DPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQS 510 (597)
T ss_dssp HT--TTTCSHHHHHHHHHHHHHTCHHHHHH-HHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCC
T ss_pred Hh--CccchHHHHHHHHHHHHcCCHHHHHH-HHHHHHHhCCC-ChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhcccc
Confidence 42 23344555555555555555555555 55555443322 4455555566666666666666666555544 33
Q ss_pred CCC--hhhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHh
Q 015370 331 KMT--SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398 (408)
Q Consensus 331 ~p~--~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~ 398 (408)
.|+ ..+|..++.+|.+.|++++|.++|+++.+.+ +.+..+|..+..+|.+.|++++|.++|+++.+
T Consensus 511 ~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~--p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~ 578 (597)
T 2xpi_A 511 NEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLS--TNDANVHTAIALVYLHKKIPGLAITHLHESLA 578 (597)
T ss_dssp CSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC--CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 444 4455556666666666666666666655543 23555566666666666666666666666555
No 5
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.95 E-value=6.8e-25 Score=200.43 Aligned_cols=325 Identities=10% Similarity=-0.015 Sum_probs=278.8
Q ss_pred CCCCcHHHHHHHHHHcCCCCChhhHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHHH
Q 015370 67 LPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERY 146 (408)
Q Consensus 67 ~~~~~a~~~l~~~~~~g~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~ 146 (408)
...+.+...++...+. .+.+..+|..+...+.+.|++++|++.|+++.+.. +.+...|..+..++.+.|++++|.+.
T Consensus 47 ~~~~~a~~~~~~a~~~-~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~l~~~~~~~g~~~~A~~~ 123 (388)
T 1w3b_A 47 RRLDRSAHFSTLAIKQ-NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLK--PDFIDGYINLAAALVAAGDMEGAVQA 123 (388)
T ss_dssp TCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHHSCSSHHHHH
T ss_pred CCHHHHHHHHHHHHhc-CCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHcC--cchHHHHHHHHHHHHHcCCHHHHHHH
Confidence 4445666666655554 56688899999999999999999999999998863 44567899999999999999999999
Q ss_pred HhcCCCCCC-CHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCC
Q 015370 147 FEGLPLSAK-TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVP 225 (408)
Q Consensus 147 ~~~~~~~~~-~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p 225 (408)
|+++....| +...+..+...+...|++++|.+.|+++.... +.+..+|..+...+.+.|++++|...|+++.+.+..
T Consensus 124 ~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~- 201 (388)
T 1w3b_A 124 YVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQ-PNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPN- 201 (388)
T ss_dssp HHHHHHHCTTCTHHHHHHHHHHHTTSCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTT-
T ss_pred HHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-
Confidence 998776655 46778888999999999999999999998864 446789999999999999999999999999986433
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHH
Q 015370 226 DIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFL 305 (408)
Q Consensus 226 ~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l 305 (408)
+...+..+...+...|++++|...+++.... .+.+..++..+...|.+.|++++|.. .+.++....+. +..+|..+
T Consensus 202 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~--~p~~~~~~~~l~~~~~~~g~~~~A~~-~~~~al~~~p~-~~~~~~~l 277 (388)
T 1w3b_A 202 FLDAYINLGNVLKEARIFDRAVAAYLRALSL--SPNHAVVHGNLACVYYEQGLIDLAID-TYRRAIELQPH-FPDAYCNL 277 (388)
T ss_dssp CHHHHHHHHHHHHTTTCTTHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHTCSS-CHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--CcCCHHHHHHHHHHHHHcCCHHHHHH-HHHHHHhhCCC-CHHHHHHH
Confidence 5778888999999999999999999998873 34568889999999999999999999 88888776543 56789999
Q ss_pred HHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHhcCC
Q 015370 306 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGL 385 (408)
Q Consensus 306 i~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~ 385 (408)
...+.+.|++++|.+.|+++.+.. ..+..++..+...+.+.|++++|...++++.+.. +.+..+|..+..++.+.|+
T Consensus 278 ~~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~l~~~~~~~g~ 354 (388)
T 1w3b_A 278 ANALKEKGSVAEAEDCYNTALRLC-PTHADSLNNLANIKREQGNIEEAVRLYRKALEVF--PEFAAAHSNLASVLQQQGK 354 (388)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSC--TTCHHHHHHHHHHHHTTTC
T ss_pred HHHHHHcCCHHHHHHHHHHHHhhC-cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHcCC
Confidence 999999999999999999998874 3477789999999999999999999999998753 4578899999999999999
Q ss_pred hHHHHHHHHHHHhcCCCCCC
Q 015370 386 TEKANEFHMLLLQKNCAPTN 405 (408)
Q Consensus 386 ~~~a~~~~~~m~~~g~~p~~ 405 (408)
+++|.+.|+++.+ +.|+.
T Consensus 355 ~~~A~~~~~~a~~--~~p~~ 372 (388)
T 1w3b_A 355 LQEALMHYKEAIR--ISPTF 372 (388)
T ss_dssp CHHHHHHHHHHHT--TCTTC
T ss_pred HHHHHHHHHHHHh--hCCCC
Confidence 9999999999987 56653
No 6
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.95 E-value=2.5e-24 Score=196.66 Aligned_cols=324 Identities=12% Similarity=0.039 Sum_probs=281.0
Q ss_pred CCCCcHHHHHHHHHHcCCCCChhhHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHHH
Q 015370 67 LPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERY 146 (408)
Q Consensus 67 ~~~~~a~~~l~~~~~~g~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~ 146 (408)
.+.+.|.+.++.+.+. .+.+...+..+...+...|++++|...++...+.. +.+...|..+..++.+.|++++|...
T Consensus 13 g~~~~A~~~~~~~~~~-~p~~~~~~~~l~~~~~~~~~~~~a~~~~~~a~~~~--p~~~~~~~~lg~~~~~~g~~~~A~~~ 89 (388)
T 1w3b_A 13 GDFEAAERHCMQLWRQ-EPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQN--PLLAEAYSNLGNVYKERGQLQEAIEH 89 (388)
T ss_dssp TCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC--CCchHHHHHHHHHHHHCCCHHHHHHH
Confidence 5566788888877765 34566778888888999999999999999998864 66788999999999999999999999
Q ss_pred HhcCCCCCC-CHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCC
Q 015370 147 FEGLPLSAK-TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVP 225 (408)
Q Consensus 147 ~~~~~~~~~-~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p 225 (408)
|+++....| +..+|..+..++.+.|++++|.+.|+++.+.+ +.+...+..+...+...|++++|.+.|+++..... .
T Consensus 90 ~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p-~ 167 (388)
T 1w3b_A 90 YRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYN-PDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQP-N 167 (388)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHC-TTCTHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCT-T
T ss_pred HHHHHHcCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC-C
Confidence 998876544 57789999999999999999999999999875 34566788899999999999999999999998643 2
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHH
Q 015370 226 DIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFL 305 (408)
Q Consensus 226 ~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l 305 (408)
+..+|..+...+...|++++|...|+++.+. .+.+...|..+...+...|++++|.. .+.+.....+. +..++..+
T Consensus 168 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~--~p~~~~~~~~lg~~~~~~~~~~~A~~-~~~~al~~~p~-~~~~~~~l 243 (388)
T 1w3b_A 168 FAVAWSNLGCVFNAQGEIWLAIHHFEKAVTL--DPNFLDAYINLGNVLKEARIFDRAVA-AYLRALSLSPN-HAVVHGNL 243 (388)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHTTTCTTHHHH-HHHHHHHHCTT-CHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--CCCcHHHHHHHHHHHHHcCCHHHHHH-HHHHHHhhCcC-CHHHHHHH
Confidence 5788999999999999999999999999883 35567889999999999999999999 88887766443 67889999
Q ss_pred HHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHhcCC
Q 015370 306 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGL 385 (408)
Q Consensus 306 i~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~ 385 (408)
...|...|++++|.+.|+++.+.+.. +..+|..+...+.+.|++++|...|+++.+.. +.+..+|..+...+.+.|+
T Consensus 244 ~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~l~~~~~~~g~ 320 (388)
T 1w3b_A 244 ACVYYEQGLIDLAIDTYRRAIELQPH-FPDAYCNLANALKEKGSVAEAEDCYNTALRLC--PTHADSLNNLANIKREQGN 320 (388)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHTCSS-CHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHTTTC
T ss_pred HHHHHHcCCHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC--cccHHHHHHHHHHHHHcCC
Confidence 99999999999999999999886432 56688999999999999999999999999864 5688999999999999999
Q ss_pred hHHHHHHHHHHHhcCCCCC
Q 015370 386 TEKANEFHMLLLQKNCAPT 404 (408)
Q Consensus 386 ~~~a~~~~~~m~~~g~~p~ 404 (408)
+++|...++++.+ ..|+
T Consensus 321 ~~~A~~~~~~al~--~~p~ 337 (388)
T 1w3b_A 321 IEEAVRLYRKALE--VFPE 337 (388)
T ss_dssp HHHHHHHHHHHTT--SCTT
T ss_pred HHHHHHHHHHHHh--cCCC
Confidence 9999999999987 4454
No 7
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.94 E-value=1.4e-23 Score=195.36 Aligned_cols=308 Identities=13% Similarity=0.004 Sum_probs=263.3
Q ss_pred CCCChhhHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHHHHhcCCCCC-CCHHHHHH
Q 015370 84 NQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA-KTSETYTA 162 (408)
Q Consensus 84 ~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~-~~~~~~~~ 162 (408)
.+.+...+..+...+.+.|++++|+++|+.+.+.. +.+...+..+..++...|++++|...|+++.... .+..++..
T Consensus 22 ~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~--p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 99 (450)
T 2y4t_A 22 SMADVEKHLELGKKLLAAGQLADALSQFHAAVDGD--PDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQ 99 (450)
T ss_dssp -CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC--CccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 34567889999999999999999999999999864 5678899999999999999999999999987654 46889999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHhCCCCCCh---hhHHHHHH------------HHHhcCCHHHHHHHHHHHHhCCCCCCH
Q 015370 163 LLHLYAGAKWTEKAEELFERVKQSNLSFNA---LMYNEMMT------------LYMSVGQVEKVALVVEEIKRKNVVPDI 227 (408)
Q Consensus 163 ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~---~~~~~li~------------~~~~~g~~~~a~~~~~~m~~~g~~p~~ 227 (408)
+..+|.+.|++++|.+.|+++.+.+ +.+. .++..+.. .+...|++++|...|+++.+... .+.
T Consensus 100 l~~~~~~~g~~~~A~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~-~~~ 177 (450)
T 2y4t_A 100 RGHLLLKQGKLDEAEDDFKKVLKSN-PSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCV-WDA 177 (450)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTSC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT-TCH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhcC-CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CCh
Confidence 9999999999999999999999875 3344 66666644 48899999999999999987643 377
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHH--
Q 015370 228 FTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFL-- 305 (408)
Q Consensus 228 ~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l-- 305 (408)
.++..+..+|.+.|++++|.++|+++.+. .+.+..++..+...|.+.|++++|.. .+..+....+. +...+..+
T Consensus 178 ~~~~~l~~~~~~~g~~~~A~~~~~~~~~~--~~~~~~~~~~l~~~~~~~g~~~~A~~-~~~~~~~~~p~-~~~~~~~~~~ 253 (450)
T 2y4t_A 178 ELRELRAECFIKEGEPRKAISDLKAASKL--KNDNTEAFYKISTLYYQLGDHELSLS-EVRECLKLDQD-HKRCFAHYKQ 253 (450)
T ss_dssp HHHHHHHHHHHHTTCGGGGHHHHHHHHHH--HCSCHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHHCTT-CHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHcCCHHHHHH-HHHHHHHhCCC-hHHHHHHHHH
Confidence 88999999999999999999999999873 35678899999999999999999999 89888765433 44455444
Q ss_pred ----------HHHHHhcCCHHHHHHHHHHHHhccCCCC-----hhhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCCH
Q 015370 306 ----------IILYAGLGNKDKIDQIWKSLRMTKQKMT-----SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDI 370 (408)
Q Consensus 306 ----------i~~~~~~~~~~~a~~~~~~m~~~~~~p~-----~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~~~ 370 (408)
...+...|++++|.+.|+++.+. .|+ ...|..+...+.+.|++++|...++++.+.. +.+.
T Consensus 254 ~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~--~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~--p~~~ 329 (450)
T 2y4t_A 254 VKKLNKLIESAEELIRDGRYTDATSKYESVMKT--EPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQME--PDNV 329 (450)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--CCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHC--TTCH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--CCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC--cccH
Confidence 78899999999999999999875 344 3467888999999999999999999998864 4578
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCCCC
Q 015370 371 SACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 405 (408)
Q Consensus 371 ~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~ 405 (408)
..|..+..+|...|++++|...++++.+ +.|+.
T Consensus 330 ~~~~~l~~~~~~~~~~~~A~~~~~~al~--~~p~~ 362 (450)
T 2y4t_A 330 NALKDRAEAYLIEEMYDEAIQDYETAQE--HNEND 362 (450)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHT--TSSSC
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHH--hCcch
Confidence 8999999999999999999999999988 55653
No 8
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.91 E-value=5.2e-21 Score=178.06 Aligned_cols=326 Identities=11% Similarity=0.010 Sum_probs=266.6
Q ss_pred cCCCCcHHHHHHHHHHcCCCCChhhHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHH
Q 015370 66 SLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGER 145 (408)
Q Consensus 66 ~~~~~~a~~~l~~~~~~g~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~ 145 (408)
..+.+.|...++.+.+. .+.+...+..+...+...|++++|++.|+++.+.+ +.+...+..+..++.+.|++++|.+
T Consensus 39 ~g~~~~A~~~~~~~l~~-~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~l~~~~~~~g~~~~A~~ 115 (450)
T 2y4t_A 39 AGQLADALSQFHAAVDG-DPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLK--MDFTAARLQRGHLLLKQGKLDEAED 115 (450)
T ss_dssp TTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHh-CCccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHcCCHHHHHH
Confidence 35667889999988876 45578899999999999999999999999999875 5568899999999999999999999
Q ss_pred HHhcCCCCCCC-H---HHHHHHH------------HHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHH
Q 015370 146 YFEGLPLSAKT-S---ETYTALL------------HLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 209 (408)
Q Consensus 146 ~~~~~~~~~~~-~---~~~~~ll------------~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~ 209 (408)
.|+++....|+ . ..+..+. ..+.+.|++++|...|+++.+.. +.+..++..+..+|.+.|+++
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~g~~~ 194 (450)
T 2y4t_A 116 DFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVC-VWDAELRELRAECFIKEGEPR 194 (450)
T ss_dssp HHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCGG
T ss_pred HHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHCCCHH
Confidence 99998877665 3 5666664 44899999999999999999865 557889999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHH------------HHHHHHcC
Q 015370 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL------------VNIYITAS 277 (408)
Q Consensus 210 ~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~l------------i~~~~~~~ 277 (408)
+|...|+++.+... .+..++..+...+...|++++|...|+++.+. .+.+...+..+ ...+.+.|
T Consensus 195 ~A~~~~~~~~~~~~-~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~--~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 271 (450)
T 2y4t_A 195 KAISDLKAASKLKN-DNTEAFYKISTLYYQLGDHELSLSEVRECLKL--DQDHKRCFAHYKQVKKLNKLIESAEELIRDG 271 (450)
T ss_dssp GGHHHHHHHHHHHC-SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCC-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCChHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999987633 36889999999999999999999999999873 34455555555 88999999
Q ss_pred chhhhHHHHHHHHHHhcccCc---cchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHH
Q 015370 278 HLVNAESSTLVEAEKSITQRQ---WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 354 (408)
Q Consensus 278 ~~~~a~~~~~~~~~~~~~~~~---~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~ 354 (408)
++++|.. .+..+....+... ...|..+...+.+.|++++|.+.++++.+.. ..+...|..+..+|...|++++|.
T Consensus 272 ~~~~A~~-~~~~~l~~~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~-p~~~~~~~~l~~~~~~~~~~~~A~ 349 (450)
T 2y4t_A 272 RYTDATS-KYESVMKTEPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQME-PDNVNALKDRAEAYLIEEMYDEAI 349 (450)
T ss_dssp CHHHHHH-HHHHHHHHCCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred CHHHHHH-HHHHHHhcCCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-cccHHHHHHHHHHHHHhcCHHHHH
Confidence 9999999 8988887543311 3478889999999999999999999988764 226788999999999999999999
Q ss_pred HHHHHHHhhCCCCCCHHHHHHHHHH------------HHhcC-----ChHHHHHHHHHH-HhcCCCCC
Q 015370 355 EIIDQWKQSATSDFDISACNRLLGA------------FSDVG-----LTEKANEFHMLL-LQKNCAPT 404 (408)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~li~~------------~~~~g-----~~~~a~~~~~~m-~~~g~~p~ 404 (408)
..+++..+.. +-+...+..+..+ |...| +.+++.+.++++ .+ ..||
T Consensus 350 ~~~~~al~~~--p~~~~~~~~l~~~~~~~~~~~~~~~y~~lg~~~~~~~~~~~~~y~~~~l~--~~pd 413 (450)
T 2y4t_A 350 QDYETAQEHN--ENDQQIREGLEKAQRLLKQSQKRDYYKILGVKRNAKKQEIIKAYRKLALQ--WHPD 413 (450)
T ss_dssp HHHHHHHTTS--SSCHHHHHHHHHHHHHHHHHHSCCSGGGSCSSTTCCTTHHHHHHHHHHHH--SCGG
T ss_pred HHHHHHHHhC--cchHHHHHHHHHHHHHhhcccchhHHHHhCCCccCCHHHHHHHHHHHHHH--hCCC
Confidence 9999998853 3356666666533 33344 566777777763 33 4454
No 9
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.91 E-value=1.7e-20 Score=168.73 Aligned_cols=306 Identities=13% Similarity=-0.018 Sum_probs=254.5
Q ss_pred ChhhHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHHHHhcCCCCCC-CHHHHHHHHH
Q 015370 87 TVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAK-TSETYTALLH 165 (408)
Q Consensus 87 ~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~-~~~~~~~ll~ 165 (408)
++..+..+...+...|++++|++.|+++.+.. +.+...+..+...+...|++++|...|++.....| +...|..+..
T Consensus 2 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~--p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~ 79 (359)
T 3ieg_A 2 DVEKHLELGKKLLAAGQLADALSQFHAAVDGD--PDNYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGH 79 (359)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC--cccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHH
Confidence 45677888899999999999999999999864 55688999999999999999999999998776544 6889999999
Q ss_pred HHHcCCCHHHHHHHHHHHHhCCCC---CChhhHHHH------------HHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHH
Q 015370 166 LYAGAKWTEKAEELFERVKQSNLS---FNALMYNEM------------MTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 230 (408)
Q Consensus 166 ~~~~~~~~~~A~~~~~~m~~~~~~---p~~~~~~~l------------i~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~ 230 (408)
.+...|++++|...|++..+.. + .+...+..+ ...+...|++++|...++++.+... .+...+
T Consensus 80 ~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~ 157 (359)
T 3ieg_A 80 LLLKQGKLDEAEDDFKKVLKSN-PSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVCV-WDAELR 157 (359)
T ss_dssp HHHHHTCHHHHHHHHHHHHTSC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHH
T ss_pred HHHHcCChHHHHHHHHHHHhcC-CcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC-CchHHH
Confidence 9999999999999999999874 2 345555555 5788899999999999999987643 367888
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHH-------
Q 015370 231 NLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD------- 303 (408)
Q Consensus 231 ~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~------- 303 (408)
..+...+...|++++|...++++.+. .+.+...+..+...|...|++++|.. .+....+..+. +...+.
T Consensus 158 ~~~~~~~~~~~~~~~A~~~~~~~~~~--~~~~~~~~~~la~~~~~~~~~~~A~~-~~~~a~~~~~~-~~~~~~~~~~~~~ 233 (359)
T 3ieg_A 158 ELRAECFIKEGEPRKAISDLKAASKL--KSDNTEAFYKISTLYYQLGDHELSLS-EVRECLKLDQD-HKRCFAHYKQVKK 233 (359)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTT--CSCCHHHHHHHHHHHHHHTCHHHHHH-HHHHHHHHCTT-CHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHcCCHHHHHH-HHHHHHhhCcc-chHHHHHHHHHHH
Confidence 89999999999999999999999883 46678889999999999999999999 88888765443 333333
Q ss_pred -----HHHHHHHhcCCHHHHHHHHHHHHhccCCCCh----hhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCCHHHHH
Q 015370 304 -----FLIILYAGLGNKDKIDQIWKSLRMTKQKMTS----RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 374 (408)
Q Consensus 304 -----~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~----~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~ 374 (408)
.+...+.+.|++++|...+++..+.... +. ..+..+...+.+.|++++|...+++..+.. +.+...|.
T Consensus 234 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~--~~~~~~~~ 310 (359)
T 3ieg_A 234 LNKLIESAEELIRDGRYTDATSKYESVMKTEPS-VAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQME--PDNVNALK 310 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-SHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC--cccHHHHH
Confidence 2366688999999999999998876432 22 224457788999999999999999999864 45788999
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHhcCCCCCC
Q 015370 375 RLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 405 (408)
Q Consensus 375 ~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~ 405 (408)
.+...+...|++++|.+.|+++.+ +.|+.
T Consensus 311 ~~~~~~~~~g~~~~A~~~~~~a~~--~~p~~ 339 (359)
T 3ieg_A 311 DRAEAYLIEEMYDEAIQDYEAAQE--HNEND 339 (359)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHT--TCTTC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHh--cCCCC
Confidence 999999999999999999999988 45653
No 10
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.89 E-value=2.1e-20 Score=176.88 Aligned_cols=321 Identities=9% Similarity=-0.072 Sum_probs=185.7
Q ss_pred CCCCcHHHHHHHHHHcCCCCChhhHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHHH
Q 015370 67 LPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERY 146 (408)
Q Consensus 67 ~~~~~a~~~l~~~~~~g~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~ 146 (408)
...+.|...++++.+.. |+...|..+..++.+.|++++|++.++.+.+.. +.+...+..+..++.+.|++++|...
T Consensus 20 g~~~~A~~~~~~al~~~--p~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~l~~~~~~~g~~~~A~~~ 95 (514)
T 2gw1_A 20 KKYDDAIKYYNWALELK--EDPVFYSNLSACYVSVGDLKKVVEMSTKALELK--PDYSKVLLRRASANEGLGKFADAMFD 95 (514)
T ss_dssp SCHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC--SCCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred ccHHHHHHHHHHHHhcC--ccHHHHHhHHHHHHHHhhHHHHHHHHHHHhccC--hHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 45667788888887765 678888888888888888888888888888764 45567888888888888888888887
Q ss_pred HhcCCCCCC-----------------------------------------------------------------------
Q 015370 147 FEGLPLSAK----------------------------------------------------------------------- 155 (408)
Q Consensus 147 ~~~~~~~~~----------------------------------------------------------------------- 155 (408)
|+++....|
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (514)
T 2gw1_A 96 LSVLSLNGDFNDASIEPMLERNLNKQAMSKLKEKFGDIDTATATPTELSTQPAKERKDKQENLPSVTSMASFFGIFKPEL 175 (514)
T ss_dssp HHHHHHSSSCCGGGTHHHHHHHHHHHHHHHHTTC---------------------------CCCCHHHHHHHHTTSCCCC
T ss_pred HHHHHhcCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCChhhHHHhhccCCchhHHHHHHHhhcCHHH
Confidence 776532211
Q ss_pred ---------CHHHHHHHHHHHHc---CCCHHHHHHHHHHHHh-----CCC--------CCChhhHHHHHHHHHhcCCHHH
Q 015370 156 ---------TSETYTALLHLYAG---AKWTEKAEELFERVKQ-----SNL--------SFNALMYNEMMTLYMSVGQVEK 210 (408)
Q Consensus 156 ---------~~~~~~~ll~~~~~---~~~~~~A~~~~~~m~~-----~~~--------~p~~~~~~~li~~~~~~g~~~~ 210 (408)
+...+..+...+.. .|++++|...|+++.+ ..- +.+..++..+...+...|++++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (514)
T 2gw1_A 176 TFANYDESNEADKELMNGLSNLYKRSPESYDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKFLKNDPLG 255 (514)
T ss_dssp CCSSCCSSCHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHHHSSCHHH
T ss_pred HHHHhcCCcHHHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHhhhhhccCccccccChHHHHHHHHHHHHHHHCCCHHH
Confidence 02223333333332 6777777777777666 210 1234566666667777777777
Q ss_pred HHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHH
Q 015370 211 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 290 (408)
Q Consensus 211 a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~ 290 (408)
|...|+++...... ..++..+...+...|++++|...++++.+. .+.+...+..+...|...|++++|.. .+...
T Consensus 256 A~~~~~~~l~~~~~--~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~A~~-~~~~~ 330 (514)
T 2gw1_A 256 AHEDIKKAIELFPR--VNSYIYMALIMADRNDSTEYYNYFDKALKL--DSNNSSVYYHRGQMNFILQNYDQAGK-DFDKA 330 (514)
T ss_dssp HHHHHHHHHHHCCC--HHHHHHHHHHHHTSSCCTTGGGHHHHHHTT--CTTCTHHHHHHHHHHHHTTCTTHHHH-HHHHH
T ss_pred HHHHHHHHHhhCcc--HHHHHHHHHHHHHCCCHHHHHHHHHHHhhc--CcCCHHHHHHHHHHHHHhCCHHHHHH-HHHHH
Confidence 77777776654322 555666666666666666666666666552 23344555566666666666666666 55555
Q ss_pred HHhcccCccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCC-
Q 015370 291 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD- 369 (408)
Q Consensus 291 ~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~~- 369 (408)
....+. +...+..+...+...|++++|...++++.+... .+...+..+...+...|++++|...++++.+.....++
T Consensus 331 ~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~ 408 (514)
T 2gw1_A 331 KELDPE-NIFPYIQLACLAYRENKFDDCETLFSEAKRKFP-EAPEVPNFFAEILTDKNDFDKALKQYDLAIELENKLDGI 408 (514)
T ss_dssp HHTCSS-CSHHHHHHHHHTTTTTCHHHHHHHHHHHHHHST-TCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSSSC
T ss_pred HHhChh-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHcc-cCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccchH
Confidence 443322 344455555555555555555555555444321 12334444444445555555555555444432211111
Q ss_pred ---HHHHHHHHHHHHh---cCChHHHHHHHHHHHh
Q 015370 370 ---ISACNRLLGAFSD---VGLTEKANEFHMLLLQ 398 (408)
Q Consensus 370 ---~~~~~~li~~~~~---~g~~~~a~~~~~~m~~ 398 (408)
...|..+...+.. .|++++|...++++.+
T Consensus 409 ~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~ 443 (514)
T 2gw1_A 409 YVGIAPLVGKATLLTRNPTVENFIEATNLLEKASK 443 (514)
T ss_dssp SSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHH
Confidence 2244444444444 4555555554444443
No 11
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.89 E-value=6.1e-20 Score=163.28 Aligned_cols=294 Identities=9% Similarity=-0.013 Sum_probs=248.8
Q ss_pred CCCChhhHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHHHHhcCCCCC-CCHHHHHH
Q 015370 84 NQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA-KTSETYTA 162 (408)
Q Consensus 84 ~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~-~~~~~~~~ 162 (408)
.+.+...+..+...+...|++++|+++|+++.+.. +.+...+..++..+...|++++|..+++++.... .+...|..
T Consensus 18 ~~~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~--p~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 95 (330)
T 3hym_B 18 LQENLDVVVSLAERHYYNCDFKMCYKLTSVVMEKD--PFHASCLPVHIGTLVELNKANELFYLSHKLVDLYPSNPVSWFA 95 (330)
T ss_dssp --CCCTTHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCTTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH
T ss_pred chhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC--CCChhhHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHH
Confidence 45667788889999999999999999999999875 5566777788899999999999999999877654 46889999
Q ss_pred HHHHHHcCC-CHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcC
Q 015370 163 LLHLYAGAK-WTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL 241 (408)
Q Consensus 163 ll~~~~~~~-~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g 241 (408)
+...+...| ++++|.+.|++..... +.+..+|..+...+...|++++|...+++..+.... +...+..+...+...|
T Consensus 96 l~~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~ 173 (330)
T 3hym_B 96 VGCYYLMVGHKNEHARRYLSKATTLE-KTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKG-CHLPMLYIGLEYGLTN 173 (330)
T ss_dssp HHHHHHHSCSCHHHHHHHHHHHHTTC-TTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTT-CSHHHHHHHHHHHHTT
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHhC-CccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccc-cHHHHHHHHHHHHHHh
Confidence 999999999 9999999999999875 456789999999999999999999999999886433 4566777899999999
Q ss_pred CHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcc--------cCccchHHHHHHHHHhcC
Q 015370 242 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT--------QRQWITYDFLIILYAGLG 313 (408)
Q Consensus 242 ~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~--------~~~~~~~~~li~~~~~~~ 313 (408)
++++|...++++.+. .+.+...+..+...+.+.|++++|.. .+........ +....+|..+...+...|
T Consensus 174 ~~~~A~~~~~~al~~--~~~~~~~~~~l~~~~~~~~~~~~A~~-~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g 250 (330)
T 3hym_B 174 NSKLAERFFSQALSI--APEDPFVMHEVGVVAFQNGEWKTAEK-WFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLK 250 (330)
T ss_dssp CHHHHHHHHHHHHTT--CTTCHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHh--CCCChHHHHHHHHHHHHcccHHHHHH-HHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhc
Confidence 999999999999983 46678889999999999999999999 8888876542 334678999999999999
Q ss_pred CHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHH-HhcCChH
Q 015370 314 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAF-SDVGLTE 387 (408)
Q Consensus 314 ~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~li~~~-~~~g~~~ 387 (408)
++++|...+++..+.... +...+..+...+.+.|++++|...+++..+.. +.+...+..+..++ ...|+.+
T Consensus 251 ~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~l~~~~~~~~g~~~ 322 (330)
T 3hym_B 251 KYAEALDYHRQALVLIPQ-NASTYSAIGYIHSLMGNFENAVDYFHTALGLR--RDDTFSVTMLGHCIEMYIGDSE 322 (330)
T ss_dssp CHHHHHHHHHHHHHHSTT-CSHHHHHHHHHHHHHTCHHHHHHHHHTTTTTC--SCCHHHHHHHHHHHHTTTTC--
T ss_pred CHHHHHHHHHHHHhhCcc-chHHHHHHHHHHHHhccHHHHHHHHHHHHccC--CCchHHHHHHHHHHHHHhCchh
Confidence 999999999998876532 56778889999999999999999999988753 44777888888888 4556544
No 12
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.88 E-value=7.5e-20 Score=173.01 Aligned_cols=322 Identities=8% Similarity=-0.056 Sum_probs=267.5
Q ss_pred cCCCCcHHHHHHHHHHcCCCCChhhHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCC----------------------
Q 015370 66 SLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLS---------------------- 123 (408)
Q Consensus 66 ~~~~~~a~~~l~~~~~~g~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~---------------------- 123 (408)
....+.|...+++..+.+ +.+...+..+..++.+.|++++|+..|+++.+.+ +++
T Consensus 52 ~g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (514)
T 2gw1_A 52 VGDLKKVVEMSTKALELK-PDYSKVLLRRASANEGLGKFADAMFDLSVLSLNG--DFNDASIEPMLERNLNKQAMSKLKE 128 (514)
T ss_dssp HTCHHHHHHHHHHHHHHC-SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSS--SCCGGGTHHHHHHHHHHHHHHHHTT
T ss_pred HhhHHHHHHHHHHHhccC-hHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC--CCccchHHHHHHHHHHHHHHHHHHH
Confidence 356678889999888764 5567899999999999999999999999998764 211
Q ss_pred ---------------------------------------------------------hHHHHHHHHHHHh---hcChHHH
Q 015370 124 ---------------------------------------------------------DSDYATRIDLMTK---VFGIHSG 143 (408)
Q Consensus 124 ---------------------------------------------------------~~~~~~li~~~~~---~g~~~~a 143 (408)
...+......+.. .|++++|
T Consensus 129 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A 208 (514)
T 2gw1_A 129 KFGDIDTATATPTELSTQPAKERKDKQENLPSVTSMASFFGIFKPELTFANYDESNEADKELMNGLSNLYKRSPESYDKA 208 (514)
T ss_dssp C---------------------------CCCCHHHHHHHHTTSCCCCCCSSCCSSCHHHHHHHHHHHHHSSCCTTHHHHH
T ss_pred HHHHHHHHHHhhhhccCChhhHHHhhccCCchhHHHHHHHhhcCHHHHHHHhcCCcHHHHHHHHHHHHHHhhhhccHHHH
Confidence 2222222333333 7899999
Q ss_pred HHHHhcCCC-----C----------CCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCH
Q 015370 144 ERYFEGLPL-----S----------AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 208 (408)
Q Consensus 144 ~~~~~~~~~-----~----------~~~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~ 208 (408)
..+|+++.. . +.+..++..+...+...|++++|...|+++.+.+ |+..+|..+...+...|++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~--~~~~~~~~l~~~~~~~~~~ 286 (514)
T 2gw1_A 209 DESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKFLKNDPLGAHEDIKKAIELF--PRVNSYIYMALIMADRNDS 286 (514)
T ss_dssp HHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHTSSCC
T ss_pred HHHHHHHHHHhhhhhccCccccccChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhC--ccHHHHHHHHHHHHHCCCH
Confidence 999988655 2 1246788899999999999999999999999875 3488999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHH
Q 015370 209 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV 288 (408)
Q Consensus 209 ~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~ 288 (408)
++|...++++..... .+..++..+...+...|++++|...++++.+. .+.+...+..+...|.+.|++++|.. .+.
T Consensus 287 ~~A~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~A~~-~~~ 362 (514)
T 2gw1_A 287 TEYYNYFDKALKLDS-NNSSVYYHRGQMNFILQNYDQAGKDFDKAKEL--DPENIFPYIQLACLAYRENKFDDCET-LFS 362 (514)
T ss_dssp TTGGGHHHHHHTTCT-TCTHHHHHHHHHHHHTTCTTHHHHHHHHHHHT--CSSCSHHHHHHHHHTTTTTCHHHHHH-HHH
T ss_pred HHHHHHHHHHhhcCc-CCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh--ChhhHHHHHHHHHHHHHcCCHHHHHH-HHH
Confidence 999999999988643 36678889999999999999999999999873 34567789999999999999999999 888
Q ss_pred HHHHhcccCccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCC-C----hhhHHHHHHHHHh---cCCHHHHHHHHHHH
Q 015370 289 EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM-T----SRNYICILSSYLM---LGHLKEVGEIIDQW 360 (408)
Q Consensus 289 ~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p-~----~~~~~~li~~~~~---~g~~~~A~~~~~~~ 360 (408)
.+.+..+. +...|..+...+...|++++|...++++....... + ...+..+...+.. .|++++|...+++.
T Consensus 363 ~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a 441 (514)
T 2gw1_A 363 EAKRKFPE-APEVPNFFAEILTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKA 441 (514)
T ss_dssp HHHHHSTT-CSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHH
T ss_pred HHHHHccc-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHH
Confidence 88776433 67788999999999999999999999987754321 1 2378889999999 99999999999999
Q ss_pred HhhCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhc
Q 015370 361 KQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 399 (408)
Q Consensus 361 ~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~ 399 (408)
.+.. +.+...|..+...|.+.|++++|...+++..+.
T Consensus 442 ~~~~--~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 478 (514)
T 2gw1_A 442 SKLD--PRSEQAKIGLAQMKLQQEDIDEAITLFEESADL 478 (514)
T ss_dssp HHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHhC--cccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 9864 457788999999999999999999999999874
No 13
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.87 E-value=8.4e-19 Score=166.85 Aligned_cols=322 Identities=8% Similarity=-0.062 Sum_probs=249.3
Q ss_pred cCCCCcHHHHHHHHHHcCCCCChhhHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHH
Q 015370 66 SLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGER 145 (408)
Q Consensus 66 ~~~~~~a~~~l~~~~~~g~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~ 145 (408)
..+.+.|...+++..+.. +.+...+..+..++.+.|++++|++.|+++.+.. +.+...+..+..++...|++++|..
T Consensus 38 ~g~~~~A~~~~~~al~~~-p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~la~~~~~~g~~~~A~~ 114 (537)
T 3fp2_A 38 AKNFNEAIKYYQYAIELD-PNEPVFYSNISACYISTGDLEKVIEFTTKALEIK--PDHSKALLRRASANESLGNFTDAMF 114 (537)
T ss_dssp TTCCC-CHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHHTCHHHHHH
T ss_pred hccHHHHHHHHHHHHhhC-CCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC--CchHHHHHHHHHHHHHcCCHHHHHH
Confidence 457788999999888764 5578889999999999999999999999998875 5567888888999999999988887
Q ss_pred HHhcCC--------------------------------------------------------------------------
Q 015370 146 YFEGLP-------------------------------------------------------------------------- 151 (408)
Q Consensus 146 ~~~~~~-------------------------------------------------------------------------- 151 (408)
.|+.+.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (537)
T 3fp2_A 115 DLSVLSLNGDFDGASIEPMLERNLNKQAMKVLNENLSKDEGRGSQVLPSNTSLASFFGIFDSHLEVSSVNTSSNYDTAYA 194 (537)
T ss_dssp HHHHHC-----------CHHHHHHHHHHHHHHHHHCC-------CCCCCHHHHHHHHHTSCHHHHHHTSCCCCSSCSSHH
T ss_pred HHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCccccccccchHhHHHHHHHhcChHHHHHHHhhccccccHHH
Confidence 764331
Q ss_pred -----------------------------------CCCCC--------HHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCC
Q 015370 152 -----------------------------------LSAKT--------SETYTALLHLYAGAKWTEKAEELFERVKQSNL 188 (408)
Q Consensus 152 -----------------------------------~~~~~--------~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~ 188 (408)
...|+ ..++..+...+...|++++|...|++..+..
T Consensus 195 ~~~~~l~~~~~~~~~~~~~a~~~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~- 273 (537)
T 3fp2_A 195 LLSDALQRLYSATDEGYLVANDLLTKSTDMYHSLLSANTVDDPLRENAALALCYTGIFHFLKNNLLDAQVLLQESINLH- 273 (537)
T ss_dssp HHHHHHHHHHTCSHHHHHHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHCCCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHhcC-
Confidence 11111 2245556677777888888888888888764
Q ss_pred CCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Q 015370 189 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268 (408)
Q Consensus 189 ~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~ 268 (408)
|+..+|..+...+...|++++|...++++.+... .+..++..+...+...|++++|...++++.+. .+.+...+..
T Consensus 274 -~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~--~~~~~~~~~~ 349 (537)
T 3fp2_A 274 -PTPNSYIFLALTLADKENSQEFFKFFQKAVDLNP-EYPPTYYHRGQMYFILQDYKNAKEDFQKAQSL--NPENVYPYIQ 349 (537)
T ss_dssp -CCHHHHHHHHHHTCCSSCCHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCSHHHHH
T ss_pred -CCchHHHHHHHHHHHhcCHHHHHHHHHHHhccCC-CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHh--CCCCHHHHHH
Confidence 5577888888888888888888888888877543 25677888888888889999999998888773 2445677888
Q ss_pred HHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCCh-----hhHHHHHHH
Q 015370 269 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS-----RNYICILSS 343 (408)
Q Consensus 269 li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~-----~~~~~li~~ 343 (408)
+...|.+.|++++|.. .+..+....+ .+...|..+...+...|++++|.+.|++..+....... ..+......
T Consensus 350 la~~~~~~g~~~~A~~-~~~~~~~~~~-~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~a~~ 427 (537)
T 3fp2_A 350 LACLLYKQGKFTESEA-FFNETKLKFP-TLPEVPTFFAEILTDRGDFDTAIKQYDIAKRLEEVQEKIHVGIGPLIGKATI 427 (537)
T ss_dssp HHHHHHHTTCHHHHHH-HHHHHHHHCT-TCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCSSCSSTTHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHH-HHHHHHHhCC-CChHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHH
Confidence 8888889999999998 8887776643 35678888888888999999999999887665432111 113344566
Q ss_pred HHhc----------CCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhc
Q 015370 344 YLML----------GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 399 (408)
Q Consensus 344 ~~~~----------g~~~~A~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~ 399 (408)
+.+. |++++|...|++..+.. +.+...|..+...|.+.|++++|.+.|++..+.
T Consensus 428 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~--p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 491 (537)
T 3fp2_A 428 LARQSSQDPTQLDEEKFNAAIKLLTKACELD--PRSEQAKIGLAQLKLQMEKIDEAIELFEDSAIL 491 (537)
T ss_dssp HHHHHTC----CCHHHHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHhhccchhhhHhHHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 7777 99999999999988864 456788999999999999999999999998874
No 14
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.86 E-value=4.3e-18 Score=152.96 Aligned_cols=306 Identities=10% Similarity=-0.032 Sum_probs=251.0
Q ss_pred cCCCCcHHHHHHHHHHcCCCCChhhHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHH
Q 015370 66 SLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGER 145 (408)
Q Consensus 66 ~~~~~~a~~~l~~~~~~g~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~ 145 (408)
..+.+.|...+++..+. .+.+...+..+...+...|++++|++.|+.+.+.. +.+...+..+..++...|++++|..
T Consensus 16 ~g~~~~A~~~~~~~l~~-~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~A~~ 92 (359)
T 3ieg_A 16 AGQLADALSQFHAAVDG-DPDNYIAYYRRATVFLAMGKSKAALPDLTKVIALK--MDFTAARLQRGHLLLKQGKLDEAED 92 (359)
T ss_dssp TTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHHTCHHHHHH
T ss_pred cCCHHHHHHHHHHHHhh-CcccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC--CCcchHHHHHHHHHHHcCChHHHHH
Confidence 35667888888888876 34568899999999999999999999999999864 4467889999999999999999999
Q ss_pred HHhcCCCCCC----CHHHHHHH------------HHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHH
Q 015370 146 YFEGLPLSAK----TSETYTAL------------LHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 209 (408)
Q Consensus 146 ~~~~~~~~~~----~~~~~~~l------------l~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~ 209 (408)
.|++.....| +...+..+ ...+...|++++|.+.++++.+.. +.+..++..+...+...|+++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3ieg_A 93 DFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVC-VWDAELRELRAECFIKEGEPR 171 (359)
T ss_dssp HHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-CCchHHHHHHHHHHHHCCCHH
Confidence 9999877656 45555555 588999999999999999998875 557889999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHH------------HHHHHHHHcC
Q 015370 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV------------NLVNIYITAS 277 (408)
Q Consensus 210 ~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~------------~li~~~~~~~ 277 (408)
+|...++++..... .+..++..+...+...|++++|...+++..+. .+.+...+. .+...+.+.|
T Consensus 172 ~A~~~~~~~~~~~~-~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 248 (359)
T 3ieg_A 172 KAISDLKAASKLKS-DNTEAFYKISTLYYQLGDHELSLSEVRECLKL--DQDHKRCFAHYKQVKKLNKLIESAEELIRDG 248 (359)
T ss_dssp HHHHHHHHHHTTCS-CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhCC-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--CccchHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999998643 36788999999999999999999999999873 233444333 3367799999
Q ss_pred chhhhHHHHHHHHHHhcccCcc---chHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHH
Q 015370 278 HLVNAESSTLVEAEKSITQRQW---ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 354 (408)
Q Consensus 278 ~~~~a~~~~~~~~~~~~~~~~~---~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~ 354 (408)
++++|.. .+..+....+.... ..+..+...+...|++++|.+.+++..+... .+...+..+...+...|++++|.
T Consensus 249 ~~~~A~~-~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~A~ 326 (359)
T 3ieg_A 249 RYTDATS-KYESVMKTEPSVAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEP-DNVNALKDRAEAYLIEEMYDEAI 326 (359)
T ss_dssp CHHHHHH-HHHHHHHHCCSSHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHH
T ss_pred CHHHHHH-HHHHHHhcCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCc-ccHHHHHHHHHHHHHcCCHHHHH
Confidence 9999999 88888776544211 2355678889999999999999999887642 26778889999999999999999
Q ss_pred HHHHHHHhhCCCCCCHHHHHHHHHHHHh
Q 015370 355 EIIDQWKQSATSDFDISACNRLLGAFSD 382 (408)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~li~~~~~ 382 (408)
..|++..+.. +.+...+..+..+...
T Consensus 327 ~~~~~a~~~~--p~~~~~~~~l~~~~~~ 352 (359)
T 3ieg_A 327 QDYEAAQEHN--ENDQQIREGLEKAQRL 352 (359)
T ss_dssp HHHHHHHTTC--TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcC--CCChHHHHHHHHHHHH
Confidence 9999999854 3356666666655543
No 15
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.86 E-value=2.4e-19 Score=159.40 Aligned_cols=276 Identities=9% Similarity=-0.092 Sum_probs=234.8
Q ss_pred CCCChHHHHHHHHHHHhhcChHHHHHHHhcCCCCC-CCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHH
Q 015370 120 FVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA-KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEM 198 (408)
Q Consensus 120 ~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~-~~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~l 198 (408)
.+.+...+..+...+...|++++|.++|+++.... .+...+..++..+...|++++|..+++++.+.. +.+..+|..+
T Consensus 18 ~~~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~l 96 (330)
T 3hym_B 18 LQENLDVVVSLAERHYYNCDFKMCYKLTSVVMEKDPFHASCLPVHIGTLVELNKANELFYLSHKLVDLY-PSNPVSWFAV 96 (330)
T ss_dssp --CCCTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTTHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTSTHHHHHH
T ss_pred chhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCChhhHHHHHHHHHHhhhHHHHHHHHHHHHHhC-cCCHHHHHHH
Confidence 45667788888999999999999999999976653 456777788899999999999999999999865 4578899999
Q ss_pred HHHHHhcC-CHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcC
Q 015370 199 MTLYMSVG-QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277 (408)
Q Consensus 199 i~~~~~~g-~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~ 277 (408)
...+...| ++++|...|++....... +...+..+...+...|++++|...++++.+. .+.+...+..+...|...|
T Consensus 97 ~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~--~~~~~~~~~~l~~~~~~~~ 173 (330)
T 3hym_B 97 GCYYLMVGHKNEHARRYLSKATTLEKT-YGPAWIAYGHSFAVESEHDQAMAAYFTAAQL--MKGCHLPMLYIGLEYGLTN 173 (330)
T ss_dssp HHHHHHSCSCHHHHHHHHHHHHTTCTT-CTHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--TTTCSHHHHHHHHHHHHTT
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--ccccHHHHHHHHHHHHHHh
Confidence 99999999 999999999999986533 5678889999999999999999999999873 3445677788999999999
Q ss_pred chhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCHHHHHHHHHHHHhccC--------CCChhhHHHHHHHHHhcCC
Q 015370 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ--------KMTSRNYICILSSYLMLGH 349 (408)
Q Consensus 278 ~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~--------~p~~~~~~~li~~~~~~g~ 349 (408)
++++|.. .+.......+. +...+..+...+...|++++|...+++..+... ......+..+...+...|+
T Consensus 174 ~~~~A~~-~~~~al~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~ 251 (330)
T 3hym_B 174 NSKLAER-FFSQALSIAPE-DPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKK 251 (330)
T ss_dssp CHHHHHH-HHHHHHTTCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTC
T ss_pred hHHHHHH-HHHHHHHhCCC-ChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcC
Confidence 9999999 88888776543 678899999999999999999999998876532 2235678889999999999
Q ss_pred HHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCCCCCC
Q 015370 350 LKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 405 (408)
Q Consensus 350 ~~~A~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~ 405 (408)
+++|...+++..+.. +.+...|..+..++.+.|++++|.+.+++..+ +.|+.
T Consensus 252 ~~~A~~~~~~a~~~~--~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~--~~p~~ 303 (330)
T 3hym_B 252 YAEALDYHRQALVLI--PQNASTYSAIGYIHSLMGNFENAVDYFHTALG--LRRDD 303 (330)
T ss_dssp HHHHHHHHHHHHHHS--TTCSHHHHHHHHHHHHHTCHHHHHHHHHTTTT--TCSCC
T ss_pred HHHHHHHHHHHHhhC--ccchHHHHHHHHHHHHhccHHHHHHHHHHHHc--cCCCc
Confidence 999999999999865 44778899999999999999999999999887 45543
No 16
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.86 E-value=4.4e-20 Score=166.98 Aligned_cols=293 Identities=11% Similarity=-0.044 Sum_probs=225.2
Q ss_pred HhcccHHHHHH-HHHHHHhccCCCC--ChHHHHHHHHHHHhhcChHHHHHHHhcCCCCC-CCHHHHHHHHHHHHcCCCHH
Q 015370 99 RKSQRYKHALE-ISEWMVTHKEFVL--SDSDYATRIDLMTKVFGIHSGERYFEGLPLSA-KTSETYTALLHLYAGAKWTE 174 (408)
Q Consensus 99 ~~~~~~~~a~~-~~~~~~~~~~~~~--~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~-~~~~~~~~ll~~~~~~~~~~ 174 (408)
...|++++|++ .|++.....+-.| +...+..+...+.+.|++++|...|+++.... .+..+|..+..++.+.|+++
T Consensus 36 ~~~~~~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~ 115 (368)
T 1fch_A 36 PWLSDYDDLTSATYDKGYQFEEENPLRDHPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQEL 115 (368)
T ss_dssp ----------CHHHHCCCCCCSSCTTTTCSSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHhhhhhHHHhcCCCCcccchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCcCHH
Confidence 34578888888 7776654331122 34567788889999999999999999877653 46888999999999999999
Q ss_pred HHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHH---------------HHHHHHh
Q 015370 175 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL---------------WISSCAA 239 (408)
Q Consensus 175 ~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~---------------ll~~~~~ 239 (408)
+|...|+++.+.+ +.+..++..+...|...|++++|...++++....... ...+.. .+..+..
T Consensus 116 ~A~~~~~~al~~~-~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (368)
T 1fch_A 116 LAISALRRCLELK-PDNQTALMALAVSFTNESLQRQACEILRDWLRYTPAY-AHLVTPAEEGAGGAGLGPSKRILGSLLS 193 (368)
T ss_dssp HHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTT-GGGCC---------------CTTHHHHH
T ss_pred HHHHHHHHHHhcC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCc-HHHHHHHHHHhhhhcccHHHHHHHHHhh
Confidence 9999999988875 5578899999999999999999999999998764332 222211 2344448
Q ss_pred cCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCHHHHH
Q 015370 240 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID 319 (408)
Q Consensus 240 ~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~ 319 (408)
.|++++|...++++.+.....++..++..+...|.+.|++++|.. .+..+....+ .+..+|..+...+...|++++|.
T Consensus 194 ~~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~-~~~~al~~~~-~~~~~~~~l~~~~~~~g~~~~A~ 271 (368)
T 1fch_A 194 DSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVD-CFTAALSVRP-NDYLLWNKLGATLANGNQSEEAV 271 (368)
T ss_dssp HHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHH
T ss_pred cccHHHHHHHHHHHHHhCcCcccHHHHHHHHHHHHHcCCHHHHHH-HHHHHHHhCc-CCHHHHHHHHHHHHHcCCHHHHH
Confidence 899999999999998742222268889999999999999999999 8888877643 35778999999999999999999
Q ss_pred HHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC---------CCHHHHHHHHHHHHhcCChHHHH
Q 015370 320 QIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSD---------FDISACNRLLGAFSDVGLTEKAN 390 (408)
Q Consensus 320 ~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~---------~~~~~~~~li~~~~~~g~~~~a~ 390 (408)
..|++..+... .+...+..+...|.+.|++++|...|++..+..... ....+|..+..+|...|++++|.
T Consensus 272 ~~~~~al~~~~-~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~ 350 (368)
T 1fch_A 272 AAYRRALELQP-GYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQSDAYG 350 (368)
T ss_dssp HHHHHHHHHCT-TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHHHHTCGGGHH
T ss_pred HHHHHHHHhCC-CcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHHHhCChHhHH
Confidence 99999887642 356788889999999999999999999988753111 12688999999999999999999
Q ss_pred HHHHHH
Q 015370 391 EFHMLL 396 (408)
Q Consensus 391 ~~~~~m 396 (408)
.++++.
T Consensus 351 ~~~~~~ 356 (368)
T 1fch_A 351 AADARD 356 (368)
T ss_dssp HHHTTC
T ss_pred HhHHHH
Confidence 887643
No 17
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.84 E-value=9.5e-20 Score=164.78 Aligned_cols=267 Identities=12% Similarity=-0.014 Sum_probs=205.1
Q ss_pred ChHHHHHHHHHHHhhcChHHHHHHHhcCCCC-CCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHH
Q 015370 123 SDSDYATRIDLMTKVFGIHSGERYFEGLPLS-AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTL 201 (408)
Q Consensus 123 ~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~-~~~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~ 201 (408)
+...+..+...+.+.|++++|..+|+++... +.+..+|..+..+|.+.|++++|+..|+++.+.. +.+..+|..+...
T Consensus 64 ~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~ 142 (365)
T 4eqf_A 64 DWPGAFEEGLKRLKEGDLPVTILFMEAAILQDPGDAEAWQFLGITQAENENEQAAIVALQRCLELQ-PNNLKALMALAVS 142 (365)
T ss_dssp TCTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcC-CCCHHHHHHHHHH
Confidence 3445777788888888888888888877654 3467888888888888899999999998888764 4467888888888
Q ss_pred HHhcCCHHHHHHHHHHHHhCCCCCC-----------HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHH
Q 015370 202 YMSVGQVEKVALVVEEIKRKNVVPD-----------IFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 270 (408)
Q Consensus 202 ~~~~g~~~~a~~~~~~m~~~g~~p~-----------~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li 270 (408)
|...|++++|...|+++.+.. |+ ...+..+...+...|++++|..+++++.+.....++..++..+.
T Consensus 143 ~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~ 220 (365)
T 4eqf_A 143 YTNTSHQQDACEALKNWIKQN--PKYKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLG 220 (365)
T ss_dssp HHHTTCHHHHHHHHHHHHHHC--HHHHCC-------------------CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHH
T ss_pred HHccccHHHHHHHHHHHHHhC--ccchHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHH
Confidence 999999999999998887642 22 22333457788889999999999999887422222688899999
Q ss_pred HHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCH
Q 015370 271 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 350 (408)
Q Consensus 271 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~ 350 (408)
..|.+.|++++|.. .+.+..+..+. +..+|..+...|...|++++|.+.|++..+.... +...+..+...|.+.|++
T Consensus 221 ~~~~~~g~~~~A~~-~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~ 297 (365)
T 4eqf_A 221 VLFHLSGEFNRAID-AFNAALTVRPE-DYSLWNRLGATLANGDRSEEAVEAYTRALEIQPG-FIRSRYNLGISCINLGAY 297 (365)
T ss_dssp HHHHHHTCHHHHHH-HHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCC
T ss_pred HHHHHCCCHHHHHH-HHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHHCCCH
Confidence 99999999999999 88888776443 6778999999999999999999999988876422 467788899999999999
Q ss_pred HHHHHHHHHHHhhCCCC----------CCHHHHHHHHHHHHhcCChHHHHHHHHH
Q 015370 351 KEVGEIIDQWKQSATSD----------FDISACNRLLGAFSDVGLTEKANEFHML 395 (408)
Q Consensus 351 ~~A~~~~~~~~~~~~~~----------~~~~~~~~li~~~~~~g~~~~a~~~~~~ 395 (408)
++|...|++..+..... .+...|..+..++...|+.+.+..+.++
T Consensus 298 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~a~~~~~~ 352 (365)
T 4eqf_A 298 REAVSNFLTALSLQRKSRNQQQVPHPAISGNIWAALRIALSLMDQPELFQAANLG 352 (365)
T ss_dssp HHHHHHHHHHHHHHHCC------------CHHHHHHHHHHHHHTCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhCcccCCCcccchhhhHHHHHHHHHHHHHHcCcHHHHHHHHHh
Confidence 99999999987643110 1357899999999999999988877665
No 18
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.83 E-value=9.5e-19 Score=158.19 Aligned_cols=267 Identities=9% Similarity=-0.087 Sum_probs=220.4
Q ss_pred CChhhHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHHHHhcCCCCC-CCHHHHHHHH
Q 015370 86 ATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA-KTSETYTALL 164 (408)
Q Consensus 86 ~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~-~~~~~~~~ll 164 (408)
.+...+..+...+.+.|++++|++.|+++.+.. +.+...|..+..++...|++++|...|++..... .+..+|..+.
T Consensus 63 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~ 140 (365)
T 4eqf_A 63 KDWPGAFEEGLKRLKEGDLPVTILFMEAAILQD--PGDAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALA 140 (365)
T ss_dssp TTCTTHHHHHHHHHHHTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred cchhHHHHHHHHHHHCCCHHHHHHHHHHHHHhC--cCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 355668899999999999999999999999874 5678899999999999999999999999877654 4689999999
Q ss_pred HHHHcCCCHHHHHHHHHHHHhCCCCCCh----------hhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCC-CCHHHHHHH
Q 015370 165 HLYAGAKWTEKAEELFERVKQSNLSFNA----------LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVV-PDIFTYNLW 233 (408)
Q Consensus 165 ~~~~~~~~~~~A~~~~~~m~~~~~~p~~----------~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~-p~~~~~~~l 233 (408)
.+|...|++++|...|+++.+.. +.+. ..+..+...+.+.|++++|...|+++.+.... ++..++..+
T Consensus 141 ~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l 219 (365)
T 4eqf_A 141 VSYTNTSHQQDACEALKNWIKQN-PKYKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGL 219 (365)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHC-HHHHCC-------------------CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHH
T ss_pred HHHHccccHHHHHHHHHHHHHhC-ccchHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHH
Confidence 99999999999999999998754 1122 23344588899999999999999999986432 267889999
Q ss_pred HHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcC
Q 015370 234 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 313 (408)
Q Consensus 234 l~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~ 313 (408)
...+...|++++|...|+++.+. .+.+..+|..+..+|.+.|++++|.. .++++....+. +..+|..+...|...|
T Consensus 220 ~~~~~~~g~~~~A~~~~~~al~~--~p~~~~~~~~l~~~~~~~g~~~~A~~-~~~~al~~~p~-~~~~~~~l~~~~~~~g 295 (365)
T 4eqf_A 220 GVLFHLSGEFNRAIDAFNAALTV--RPEDYSLWNRLGATLANGDRSEEAVE-AYTRALEIQPG-FIRSRYNLGISCINLG 295 (365)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHHCTT-CHHHHHHHHHHHHHHT
T ss_pred HHHHHHCCCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHcCCHHHHHH-HHHHHHhcCCC-chHHHHHHHHHHHHCC
Confidence 99999999999999999999873 45678899999999999999999999 88888776433 5788999999999999
Q ss_pred CHHHHHHHHHHHHhccCCC-----------ChhhHHHHHHHHHhcCCHHHHHHHHHH
Q 015370 314 NKDKIDQIWKSLRMTKQKM-----------TSRNYICILSSYLMLGHLKEVGEIIDQ 359 (408)
Q Consensus 314 ~~~~a~~~~~~m~~~~~~p-----------~~~~~~~li~~~~~~g~~~~A~~~~~~ 359 (408)
++++|...|++..+..... +...|..+..++...|+.+.+..+..+
T Consensus 296 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~a~~~~~~ 352 (365)
T 4eqf_A 296 AYREAVSNFLTALSLQRKSRNQQQVPHPAISGNIWAALRIALSLMDQPELFQAANLG 352 (365)
T ss_dssp CCHHHHHHHHHHHHHHHCC------------CHHHHHHHHHHHHHTCHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHhCcccCCCcccchhhhHHHHHHHHHHHHHHcCcHHHHHHHHHh
Confidence 9999999999987654321 256788899999999999999888765
No 19
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.82 E-value=6.5e-18 Score=160.70 Aligned_cols=303 Identities=10% Similarity=-0.030 Sum_probs=242.5
Q ss_pred ChhhHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHHHHhcCCCCC-CCHHHHHHHHH
Q 015370 87 TVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA-KTSETYTALLH 165 (408)
Q Consensus 87 ~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~-~~~~~~~~ll~ 165 (408)
....+..+...+.+.|++++|++.|+++.+.. +.++..|..+..++.+.|++++|++.|++..... .+..++..+..
T Consensus 24 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~ 101 (537)
T 3fp2_A 24 YAVQLKNRGNHFFTAKNFNEAIKYYQYAIELD--PNEPVFYSNISACYISTGDLEKVIEFTTKALEIKPDHSKALLRRAS 101 (537)
T ss_dssp HHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHC--TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhhC--CCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCchHHHHHHHHH
Confidence 45677889999999999999999999999875 5678899999999999999999999999877654 46889999999
Q ss_pred HHHcCCCHHHHHHHHHHHHhCCC------------------------------------CCChh----------------
Q 015370 166 LYAGAKWTEKAEELFERVKQSNL------------------------------------SFNAL---------------- 193 (408)
Q Consensus 166 ~~~~~~~~~~A~~~~~~m~~~~~------------------------------------~p~~~---------------- 193 (408)
++...|++++|...|+.+....- .|+..
T Consensus 102 ~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (537)
T 3fp2_A 102 ANESLGNFTDAMFDLSVLSLNGDFDGASIEPMLERNLNKQAMKVLNENLSKDEGRGSQVLPSNTSLASFFGIFDSHLEVS 181 (537)
T ss_dssp HHHHHTCHHHHHHHHHHHC-----------CHHHHHHHHHHHHHHHHHCC-------CCCCCHHHHHHHHHTSCHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCccccccccchHhHHHHHHHhcChHHHHH
Confidence 99999999999999964421110 01100
Q ss_pred --------------hHHHHHHHHH--------hcCCHHHHHHHHHHHHhCCCCCC------HHHHHHHHHHHHhcCCHHH
Q 015370 194 --------------MYNEMMTLYM--------SVGQVEKVALVVEEIKRKNVVPD------IFTYNLWISSCAATLNIDQ 245 (408)
Q Consensus 194 --------------~~~~li~~~~--------~~g~~~~a~~~~~~m~~~g~~p~------~~~~~~ll~~~~~~g~~~~ 245 (408)
....+...+. ..|++++|..+|+++.+...... ..++..+...+...|++++
T Consensus 182 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a~~~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 261 (537)
T 3fp2_A 182 SVNTSSNYDTAYALLSDALQRLYSATDEGYLVANDLLTKSTDMYHSLLSANTVDDPLRENAALALCYTGIFHFLKNNLLD 261 (537)
T ss_dssp TSCCCCSSCSSHHHHHHHHHHHHTCSHHHHHHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHhhccccccHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHCCCcchhhHHHHHHHHHHHHHHHhcccHHH
Confidence 1111111111 12478999999999987543211 2356667778889999999
Q ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCHHHHHHHHHHH
Q 015370 246 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 325 (408)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m 325 (408)
|...++++.+. .|+...+..+...|...|++++|.. .+..+....+. +..+|..+...+...|++++|.+.+++.
T Consensus 262 A~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~A~~-~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a 336 (537)
T 3fp2_A 262 AQVLLQESINL---HPTPNSYIFLALTLADKENSQEFFK-FFQKAVDLNPE-YPPTYYHRGQMYFILQDYKNAKEDFQKA 336 (537)
T ss_dssp HHHHHHHHHHH---CCCHHHHHHHHHHTCCSSCCHHHHH-HHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHhc---CCCchHHHHHHHHHHHhcCHHHHHH-HHHHHhccCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 99999999884 3558889999999999999999999 88888776543 6778999999999999999999999998
Q ss_pred HhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhc
Q 015370 326 RMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 399 (408)
Q Consensus 326 ~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~ 399 (408)
.+.... +...+..+...+...|++++|..+++++.+.. +.+...|..+...+...|++++|...++++.+.
T Consensus 337 ~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~--~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 407 (537)
T 3fp2_A 337 QSLNPE-NVYPYIQLACLLYKQGKFTESEAFFNETKLKF--PTLPEVPTFFAEILTDRGDFDTAIKQYDIAKRL 407 (537)
T ss_dssp HHHCTT-CSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHc
Confidence 886532 56678889999999999999999999999875 456778899999999999999999999998774
No 20
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.82 E-value=3.3e-18 Score=154.59 Aligned_cols=266 Identities=10% Similarity=-0.047 Sum_probs=224.6
Q ss_pred ChhhHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHHHHhcCCCCC-CCHHHHHHHHH
Q 015370 87 TVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA-KTSETYTALLH 165 (408)
Q Consensus 87 ~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~-~~~~~~~~ll~ 165 (408)
+...+..+...+.+.|++++|+..|+++.+.. +.+...+..+..++...|++++|...|++..... .+..++..+..
T Consensus 63 ~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~ 140 (368)
T 1fch_A 63 DHPQPFEEGLRRLQEGDLPNAVLLFEAAVQQD--PKHMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAV 140 (368)
T ss_dssp TCSSHHHHHHHHHHTTCHHHHHHHHHHHHHSC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 45678889999999999999999999999874 5678899999999999999999999999876653 47899999999
Q ss_pred HHHcCCCHHHHHHHHHHHHhCCCCCChhhHHH---------------HHHHHHhcCCHHHHHHHHHHHHhCCCCC-CHHH
Q 015370 166 LYAGAKWTEKAEELFERVKQSNLSFNALMYNE---------------MMTLYMSVGQVEKVALVVEEIKRKNVVP-DIFT 229 (408)
Q Consensus 166 ~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~---------------li~~~~~~g~~~~a~~~~~~m~~~g~~p-~~~~ 229 (408)
.+...|++++|.+.|+++.... +.+...+.. .+..+...|++++|...|+++.+..... +..+
T Consensus 141 ~~~~~g~~~~A~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~ 219 (368)
T 1fch_A 141 SFTNESLQRQACEILRDWLRYT-PAYAHLVTPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDPDV 219 (368)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTS-TTTGGGCC---------------CTTHHHHHHHHHHHHHHHHHHHHHHSTTSCCHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhC-cCcHHHHHHHHHHhhhhcccHHHHHHHHHhhcccHHHHHHHHHHHHHhCcCcccHHH
Confidence 9999999999999999999875 223333321 2444448999999999999998764332 5788
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHH
Q 015370 230 YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILY 309 (408)
Q Consensus 230 ~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~ 309 (408)
+..+...+...|++++|...++++.+. .+.+...+..+...+.+.|++++|.. .+..+....+ .+...+..+...|
T Consensus 220 ~~~l~~~~~~~g~~~~A~~~~~~al~~--~~~~~~~~~~l~~~~~~~g~~~~A~~-~~~~al~~~~-~~~~~~~~l~~~~ 295 (368)
T 1fch_A 220 QCGLGVLFNLSGEYDKAVDCFTAALSV--RPNDYLLWNKLGATLANGNQSEEAVA-AYRRALELQP-GYIRSRYNLGISC 295 (368)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHHCT-TCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh--CcCCHHHHHHHHHHHHHcCCHHHHHH-HHHHHHHhCC-CcHHHHHHHHHHH
Confidence 999999999999999999999999873 35578889999999999999999999 8888877643 3678899999999
Q ss_pred HhcCCHHHHHHHHHHHHhccCCC----------ChhhHHHHHHHHHhcCCHHHHHHHHHH
Q 015370 310 AGLGNKDKIDQIWKSLRMTKQKM----------TSRNYICILSSYLMLGHLKEVGEIIDQ 359 (408)
Q Consensus 310 ~~~~~~~~a~~~~~~m~~~~~~p----------~~~~~~~li~~~~~~g~~~~A~~~~~~ 359 (408)
.+.|++++|...|++..+..... ....|..+..+|...|+.++|..++++
T Consensus 296 ~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 355 (368)
T 1fch_A 296 INLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQSDAYGAADAR 355 (368)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHHHHTCGGGHHHHHTT
T ss_pred HHCCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHHHhCChHhHHHhHHH
Confidence 99999999999999987764322 156788999999999999999998874
No 21
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.82 E-value=2.6e-18 Score=152.49 Aligned_cols=278 Identities=9% Similarity=-0.106 Sum_probs=154.5
Q ss_pred ChhhHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHHHHhcCCCCC-CCHHHHHHHHH
Q 015370 87 TVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA-KTSETYTALLH 165 (408)
Q Consensus 87 ~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~-~~~~~~~~ll~ 165 (408)
+...+..+...+...|++++|+.+|+++.+.. +.+...+..+..++...|++++|...|+++.... .+..++..+..
T Consensus 20 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~ 97 (327)
T 3cv0_A 20 YHENPMEEGLSMLKLANLAEAALAFEAVCQAA--PEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAV 97 (327)
T ss_dssp GSSCHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhccHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHH
Confidence 44556677778888888888888888887764 4466677777777778888888887777765543 35677777777
Q ss_pred HHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHH--HHHhcCCH
Q 015370 166 LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS--SCAATLNI 243 (408)
Q Consensus 166 ~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~--~~~~~g~~ 243 (408)
.+...|++++|.+.++++.... +.+...+..+.... |+......+.. .+...|++
T Consensus 98 ~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~ 154 (327)
T 3cv0_A 98 SHTNEHNANAALASLRAWLLSQ-PQYEQLGSVNLQAD----------------------VDIDDLNVQSEDFFFAAPNEY 154 (327)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTS-TTTTTC------------------------------------------CCTTSHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhC-CccHHHHHHHhHHH----------------------HHHHHHHHHHHhHHHHHcccH
Confidence 7777777777777777777653 22233333321000 00001111101 13444555
Q ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCHHHHHHHHH
Q 015370 244 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 323 (408)
Q Consensus 244 ~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~ 323 (408)
++|..+++++.+. .+.+...+..+...|.+.|++++|.. .+..+....+ .+..+|..+...+...|++++|.+.++
T Consensus 155 ~~A~~~~~~~~~~--~~~~~~~~~~la~~~~~~~~~~~A~~-~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~A~~~~~ 230 (327)
T 3cv0_A 155 RECRTLLHAALEM--NPNDAQLHASLGVLYNLSNNYDSAAA-NLRRAVELRP-DDAQLWNKLGATLANGNRPQEALDAYN 230 (327)
T ss_dssp HHHHHHHHHHHHH--STTCHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHhh--CCCCHHHHHHHHHHHHHhccHHHHHH-HHHHHHHhCC-CcHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 5555555555442 22344455555555555555555555 4554444322 234455555555555566666666555
Q ss_pred HHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCC-----------CHHHHHHHHHHHHhcCChHHHHHH
Q 015370 324 SLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDF-----------DISACNRLLGAFSDVGLTEKANEF 392 (408)
Q Consensus 324 ~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~-----------~~~~~~~li~~~~~~g~~~~a~~~ 392 (408)
+..+... .+...+..+...+...|++++|...+++..+... .. +...|..+..++.+.|++++|..+
T Consensus 231 ~a~~~~~-~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~ 308 (327)
T 3cv0_A 231 RALDINP-GYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQV-GGTTPTGEASREATRSMWDFFRMLLNVMNRPDLVELT 308 (327)
T ss_dssp HHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHT-TSCC-----CCTHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHcCC-CCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-ccccccccchhhcCHHHHHHHHHHHHhcCCHHHHHHH
Confidence 5544421 1344555555666666666666666666554321 10 245566666666666666666665
Q ss_pred HHH
Q 015370 393 HML 395 (408)
Q Consensus 393 ~~~ 395 (408)
+++
T Consensus 309 ~~~ 311 (327)
T 3cv0_A 309 YAQ 311 (327)
T ss_dssp TTC
T ss_pred HHH
Confidence 543
No 22
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=99.81 E-value=5.4e-21 Score=184.12 Aligned_cols=148 Identities=11% Similarity=0.023 Sum_probs=124.8
Q ss_pred hHHHHHHHHHHHhhcChHHHHHHHhcCCCC-----CCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHH
Q 015370 124 DSDYATRIDLMTKVFGIHSGERYFEGLPLS-----AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEM 198 (408)
Q Consensus 124 ~~~~~~li~~~~~~g~~~~a~~~~~~~~~~-----~~~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~l 198 (408)
..+|+++|++||+.|++++|.++|++|... .||+.+||+||++||+.|++++|.++|++|.+.|+.||..|||+|
T Consensus 127 ~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYntL 206 (1134)
T 3spa_A 127 QQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYAAA 206 (1134)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHHHH
Confidence 468999999999999999999999876532 599999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCC-HHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCC------HHHHHHHHH
Q 015370 199 MTLYMSVGQ-VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD------WVKYVNLVN 271 (408)
Q Consensus 199 i~~~~~~g~-~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~------~~~~~~li~ 271 (408)
|.++++.|+ .++|.++|++|.+.|+.||..+|++++.+..+. .+++..+++.. +..|+ ..+...|.+
T Consensus 207 I~glcK~G~~~e~A~~Ll~EM~~kG~~PD~vtY~~ll~~~eR~----~vL~~Vrkv~P--~f~p~~~~~~~~~t~~LL~d 280 (1134)
T 3spa_A 207 LQCMGRQDQDAGTIERCLEQMSQEGLKLQALFTAVLLSEEDRA----TVLKAVHKVKP--TFSLPPQLPPPVNTSKLLRD 280 (1134)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHHHHTCCSHHHHHHSCCCHHHHH----HHHHHHGGGCC--CCCCCCCCCCCCCCCTTTHH
T ss_pred HHHHHhCCCcHHHHHHHHHHHHHcCCCCChhhcccccChhhHH----HHHHHHHHhCc--ccCCCCCCcccccchHHHHH
Confidence 999999998 578999999999999999999999999776554 45555555543 34433 444556666
Q ss_pred HHHHcC
Q 015370 272 IYITAS 277 (408)
Q Consensus 272 ~~~~~~ 277 (408)
.|.+.+
T Consensus 281 l~s~d~ 286 (1134)
T 3spa_A 281 VYAKDG 286 (1134)
T ss_dssp HHCCCS
T ss_pred HHccCC
Confidence 676655
No 23
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=99.81 E-value=3.9e-20 Score=178.26 Aligned_cols=125 Identities=16% Similarity=0.150 Sum_probs=114.5
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHh---CCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHH
Q 015370 157 SETYTALLHLYAGAKWTEKAEELFERVKQ---SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 233 (408)
Q Consensus 157 ~~~~~~ll~~~~~~~~~~~A~~~~~~m~~---~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~l 233 (408)
..+||+||++||+.|++++|.++|++|.+ .|+.||+.|||+||.+|++.|++++|.++|++|.+.|+.||.+||+++
T Consensus 127 ~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYntL 206 (1134)
T 3spa_A 127 QQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYAAA 206 (1134)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHHHH
Confidence 67999999999999999999999988764 589999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCH-HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhh
Q 015370 234 ISSCAATLNI-DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 282 (408)
Q Consensus 234 l~~~~~~g~~-~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a 282 (408)
|+++++.|+. ++|.++|++|.++ |+.||..+|++++..+.+.+-++..
T Consensus 207 I~glcK~G~~~e~A~~Ll~EM~~k-G~~PD~vtY~~ll~~~eR~~vL~~V 255 (1134)
T 3spa_A 207 LQCMGRQDQDAGTIERCLEQMSQE-GLKLQALFTAVLLSEEDRATVLKAV 255 (1134)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHHHH-TCCSHHHHHHSCCCHHHHHHHHHHH
T ss_pred HHHHHhCCCcHHHHHHHHHHHHHc-CCCCChhhcccccChhhHHHHHHHH
Confidence 9999999985 7899999999995 9999999999999877666444333
No 24
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.81 E-value=3e-18 Score=152.05 Aligned_cols=234 Identities=9% Similarity=-0.072 Sum_probs=176.7
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHH
Q 015370 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 236 (408)
Q Consensus 157 ~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~ 236 (408)
...+..+...+...|++++|..+|+++.+.. +.+..+|..+...+...|++++|...++++.+... .+..++..+...
T Consensus 21 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~-~~~~~~~~la~~ 98 (327)
T 3cv0_A 21 HENPMEEGLSMLKLANLAEAALAFEAVCQAA-PEREEAWRSLGLTQAENEKDGLAIIALNHARMLDP-KDIAVHAALAVS 98 (327)
T ss_dssp SSCHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCc-CCHHHHHHHHHH
Confidence 4455566667777777777777777776653 34566777777777777777777777777766532 256667777777
Q ss_pred HHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHH--------------HH-HHHHcCchhhhHHHHHHHHHHhcccCccch
Q 015370 237 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL--------------VN-IYITASHLVNAESSTLVEAEKSITQRQWIT 301 (408)
Q Consensus 237 ~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~l--------------i~-~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 301 (408)
+...|++++|.+.++++.+. .+.+...+..+ .. .+...|++++|.. .+.++.+..+. +...
T Consensus 99 ~~~~~~~~~A~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~-~~~~~~~~~~~-~~~~ 174 (327)
T 3cv0_A 99 HTNEHNANAALASLRAWLLS--QPQYEQLGSVNLQADVDIDDLNVQSEDFFFAAPNEYRECRT-LLHAALEMNPN-DAQL 174 (327)
T ss_dssp HHHTTCHHHHHHHHHHHHHT--STTTTTC--------------------CCTTSHHHHHHHHH-HHHHHHHHSTT-CHHH
T ss_pred HHHcCCHHHHHHHHHHHHHh--CCccHHHHHHHhHHHHHHHHHHHHHHhHHHHHcccHHHHHH-HHHHHHhhCCC-CHHH
Confidence 77777777777777777663 12222222222 23 4788899999999 88888776544 6788
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHH
Q 015370 302 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFS 381 (408)
Q Consensus 302 ~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~li~~~~ 381 (408)
+..+...+...|++++|.+.++++.+... .+...+..+...+...|++++|...+++..+.. +.+...|..+...+.
T Consensus 175 ~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~--~~~~~~~~~l~~~~~ 251 (327)
T 3cv0_A 175 HASLGVLYNLSNNYDSAAANLRRAVELRP-DDAQLWNKLGATLANGNRPQEALDAYNRALDIN--PGYVRVMYNMAVSYS 251 (327)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHhCC-CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC--CCCHHHHHHHHHHHH
Confidence 99999999999999999999999887642 256788899999999999999999999998864 457888999999999
Q ss_pred hcCChHHHHHHHHHHHhc
Q 015370 382 DVGLTEKANEFHMLLLQK 399 (408)
Q Consensus 382 ~~g~~~~a~~~~~~m~~~ 399 (408)
..|++++|.+.++++.+.
T Consensus 252 ~~g~~~~A~~~~~~a~~~ 269 (327)
T 3cv0_A 252 NMSQYDLAAKQLVRAIYM 269 (327)
T ss_dssp HTTCHHHHHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHHh
Confidence 999999999999998874
No 25
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.80 E-value=1.1e-16 Score=139.64 Aligned_cols=274 Identities=9% Similarity=0.001 Sum_probs=209.7
Q ss_pred HHHHHhcccHHHHHHHHHHHHhccCCCCCh--HHHHHHHHHHHhhcChHHHHHHHhcCCCCCCCHHHHHHHHHHHHcCCC
Q 015370 95 LKELRKSQRYKHALEISEWMVTHKEFVLSD--SDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKW 172 (408)
Q Consensus 95 i~~~~~~~~~~~a~~~~~~~~~~~~~~~~~--~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~ll~~~~~~~~ 172 (408)
++-....|++..|+..++..... .|+. .....+..+|...|+++.|+..++.. .+|+..++..+...+...++
T Consensus 6 ~~~~~~~g~y~~ai~~~~~~~~~---~p~~~~e~~~~l~r~yi~~g~~~~al~~~~~~--~~~~~~a~~~la~~~~~~~~ 80 (291)
T 3mkr_A 6 VKNAFYIGSYQQCINEAQRVKPS---SPERDVERDVFLYRAYLAQRKYGVVLDEIKPS--SAPELQAVRMFAEYLASHSR 80 (291)
T ss_dssp HHHHHHTTCHHHHHHHHHHSCCC---SHHHHHHHHHHHHHHHHHTTCHHHHHHHSCTT--SCHHHHHHHHHHHHHHCSTT
T ss_pred HHHHHHHHHHHHHHHHHHhcccC---CchhhHHHHHHHHHHHHHCCCHHHHHHHhccc--CChhHHHHHHHHHHHcCCCc
Confidence 45566789999999988776543 3443 35566778999999999999877663 35678889999999999999
Q ss_pred HHHHHHHHHHHHhCCCCC-ChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHH
Q 015370 173 TEKAEELFERVKQSNLSF-NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 251 (408)
Q Consensus 173 ~~~A~~~~~~m~~~~~~p-~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~ 251 (408)
.++|++.++++...+..| +...+..+..++...|++++|++.+++ ..+...+..+...+.+.|++++|.+.++
T Consensus 81 ~~~A~~~l~~ll~~~~~P~~~~~~~~la~~~~~~g~~~~Al~~l~~------~~~~~~~~~l~~~~~~~g~~~~A~~~l~ 154 (291)
T 3mkr_A 81 RDAIVAELDREMSRSVDVTNTTFLLMAASIYFYDQNPDAALRTLHQ------GDSLECMAMTVQILLKLDRLDLARKELK 154 (291)
T ss_dssp HHHHHHHHHHHHHSCCCCSCHHHHHHHHHHHHHTTCHHHHHHHHTT------CCSHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHCCCHHHHHHHHhC------CCCHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 999999999998876434 566777788999999999999999987 3577888889999999999999999999
Q ss_pred HHhcCCCCCCCHHH---HHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCHHHHHHHHHHHHhc
Q 015370 252 EMSCDSGGSDDWVK---YVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 328 (408)
Q Consensus 252 ~~~~~~~~~~~~~~---~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~ 328 (408)
++.+. .|+... ....+..+...|++++|.. +++++.+.. +.+...|+.+..++.+.|++++|.+.|++..+.
T Consensus 155 ~~~~~---~p~~~~~~l~~a~~~l~~~~~~~~eA~~-~~~~~l~~~-p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~ 229 (291)
T 3mkr_A 155 KMQDQ---DEDATLTQLATAWVSLAAGGEKLQDAYY-IFQEMADKC-SPTLLLLNGQAACHMAQGRWEAAEGVLQEALDK 229 (291)
T ss_dssp HHHHH---CTTCHHHHHHHHHHHHHHCTTHHHHHHH-HHHHHHHHS-CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHhh---CcCcHHHHHHHHHHHHHhCchHHHHHHH-HHHHHHHhC-CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 99874 244321 1223344555689999999 899888774 447888999999999999999999999998876
Q ss_pred cCCCChhhHHHHHHHHHhcCCHHH-HHHHHHHHHhhCCCCCCHHHHHHHHHHHHhcCChHHHHH
Q 015370 329 KQKMTSRNYICILSSYLMLGHLKE-VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 391 (408)
Q Consensus 329 ~~~p~~~~~~~li~~~~~~g~~~~-A~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~ 391 (408)
... +..++..++..+...|+.++ +.++++++.+.. |+... +.....+.+.++++..
T Consensus 230 ~p~-~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~~~~---P~~~~---~~d~~~~~~~fd~~~~ 286 (291)
T 3mkr_A 230 DSG-HPETLINLVVLSQHLGKPPEVTNRYLSQLKDAH---RSHPF---IKEYRAKENDFDRLVL 286 (291)
T ss_dssp CTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC---TTCHH---HHHHHHHHHHHHHHHH
T ss_pred CCC-CHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhC---CCChH---HHHHHHHHHHHHHHHH
Confidence 432 66778888989999999876 678999988764 33322 2333444444554443
No 26
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.79 E-value=1e-16 Score=139.75 Aligned_cols=253 Identities=11% Similarity=-0.009 Sum_probs=186.3
Q ss_pred HHHHhhcChHHHHHHHhcCCCCCCC--HHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHH
Q 015370 132 DLMTKVFGIHSGERYFEGLPLSAKT--SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 209 (408)
Q Consensus 132 ~~~~~~g~~~~a~~~~~~~~~~~~~--~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~ 209 (408)
.-....|++..|+..++......|+ ......+.++|...|++++|+..++. . -+|+..++..+...+...|+.+
T Consensus 7 ~~~~~~g~y~~ai~~~~~~~~~~p~~~~e~~~~l~r~yi~~g~~~~al~~~~~---~-~~~~~~a~~~la~~~~~~~~~~ 82 (291)
T 3mkr_A 7 KNAFYIGSYQQCINEAQRVKPSSPERDVERDVFLYRAYLAQRKYGVVLDEIKP---S-SAPELQAVRMFAEYLASHSRRD 82 (291)
T ss_dssp HHHHHTTCHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHTTCHHHHHHHSCT---T-SCHHHHHHHHHHHHHHCSTTHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHCCCHHHHHHHhcc---c-CChhHHHHHHHHHHHcCCCcHH
Confidence 3445678888888888877665444 34556677888888888888876644 2 3567778888888888888888
Q ss_pred HHHHHHHHHHhCCCCCC-HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHH
Q 015370 210 KVALVVEEIKRKNVVPD-IFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV 288 (408)
Q Consensus 210 ~a~~~~~~m~~~g~~p~-~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~ 288 (408)
+|.+.++++...+..|+ ...+..+...+...|++++|++.+++ +.+...+..++..|.+.|++++|.. .++
T Consensus 83 ~A~~~l~~ll~~~~~P~~~~~~~~la~~~~~~g~~~~Al~~l~~-------~~~~~~~~~l~~~~~~~g~~~~A~~-~l~ 154 (291)
T 3mkr_A 83 AIVAELDREMSRSVDVTNTTFLLMAASIYFYDQNPDAALRTLHQ-------GDSLECMAMTVQILLKLDRLDLARK-ELK 154 (291)
T ss_dssp HHHHHHHHHHHSCCCCSCHHHHHHHHHHHHHTTCHHHHHHHHTT-------CCSHHHHHHHHHHHHHTTCHHHHHH-HHH
T ss_pred HHHHHHHHHHhcccCCCCHHHHHHHHHHHHHCCCHHHHHHHHhC-------CCCHHHHHHHHHHHHHCCCHHHHHH-HHH
Confidence 88888888887765554 45555666788888888888888876 3567778888888888888888888 888
Q ss_pred HHHHhcccCccchHHHH----HHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhhC
Q 015370 289 EAEKSITQRQWITYDFL----IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364 (408)
Q Consensus 289 ~~~~~~~~~~~~~~~~l----i~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~ 364 (408)
.+.+.. |+.. ...+ +..+...|++++|..+|+++.+.. ..+...++.+..++.+.|++++|...|++..+..
T Consensus 155 ~~~~~~--p~~~-~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~-p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~ 230 (291)
T 3mkr_A 155 KMQDQD--EDAT-LTQLATAWVSLAAGGEKLQDAYYIFQEMADKC-SPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKD 230 (291)
T ss_dssp HHHHHC--TTCH-HHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHS-CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHhhC--cCcH-HHHHHHHHHHHHhCchHHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 877664 3322 2222 233344588888888888888763 3366678888888888888888888888888764
Q ss_pred CCCCCHHHHHHHHHHHHhcCChHH-HHHHHHHHHhcCCCCC
Q 015370 365 TSDFDISACNRLLGAFSDVGLTEK-ANEFHMLLLQKNCAPT 404 (408)
Q Consensus 365 ~~~~~~~~~~~li~~~~~~g~~~~-a~~~~~~m~~~g~~p~ 404 (408)
+.+..++..++..+...|+.++ +.++++++.+ +.|+
T Consensus 231 --p~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~~--~~P~ 267 (291)
T 3mkr_A 231 --SGHPETLINLVVLSQHLGKPPEVTNRYLSQLKD--AHRS 267 (291)
T ss_dssp --TTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH--HCTT
T ss_pred --CCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--hCCC
Confidence 3477778888888888888865 5678888776 4454
No 27
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=99.75 E-value=1.1e-17 Score=149.84 Aligned_cols=278 Identities=10% Similarity=0.005 Sum_probs=127.9
Q ss_pred CCcHHHHHHHHHHcCCCCChhhHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHHHHh
Q 015370 69 KRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFE 148 (408)
Q Consensus 69 ~~~a~~~l~~~~~~g~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~ 148 (408)
.+.|.+.++++ +++.+|..+..++.+.|++++|++.|.+ .+|..+|..++..+...|++++|+++++
T Consensus 19 ld~A~~fae~~------~~~~vWs~La~A~l~~g~~~eAIdsfik-------a~D~~~y~~V~~~ae~~g~~EeAi~yl~ 85 (449)
T 1b89_A 19 LDRAYEFAERC------NEPAVWSQLAKAQLQKGMVKEAIDSYIK-------ADDPSSYMEVVQAANTSGNWEELVKYLQ 85 (449)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHhC------CChHHHHHHHHHHHHcCCHHHHHHHHHc-------CCCHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 45566666655 3446899999999999999999999964 2567799999999999999999999888
Q ss_pred cCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHH
Q 015370 149 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIF 228 (408)
Q Consensus 149 ~~~~~~~~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~ 228 (408)
...+..+++.+.+.|+.+|.+.|+++++.++++ .|+..+|+.+...|...|++++|...|..+ .
T Consensus 86 ~ark~~~~~~i~~~Li~~Y~Klg~l~e~e~f~~-------~pn~~a~~~IGd~~~~~g~yeeA~~~Y~~a---------~ 149 (449)
T 1b89_A 86 MARKKARESYVETELIFALAKTNRLAELEEFIN-------GPNNAHIQQVGDRCYDEKMYDAAKLLYNNV---------S 149 (449)
T ss_dssp -----------------------CHHHHTTTTT-------CC----------------CTTTHHHHHHHT---------T
T ss_pred HHHHhCccchhHHHHHHHHHHhCCHHHHHHHHc-------CCcHHHHHHHHHHHHHcCCHHHHHHHHHHh---------h
Confidence 777766778889999999999999999998884 367789999999999999999999999977 3
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHH
Q 015370 229 TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIIL 308 (408)
Q Consensus 229 ~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~ 308 (408)
.|..+..++.+.|++++|.+.++++ .++.+|..++.+|...|+++.|.. ....+. . +..-...++..
T Consensus 150 n~~~LA~~L~~Lg~yq~AVea~~KA-------~~~~~Wk~v~~aCv~~~ef~lA~~-~~l~L~---~--~ad~l~~lv~~ 216 (449)
T 1b89_A 150 NFGRLASTLVHLGEYQAAVDGARKA-------NSTRTWKEVCFACVDGKEFRLAQM-CGLHIV---V--HADELEELINY 216 (449)
T ss_dssp CHHHHHHHHHTTTCHHHHHHHHHHH-------TCHHHHHHHHHHHHHTTCHHHHHH-TTTTTT---T--CHHHHHHHHHH
T ss_pred hHHHHHHHHHHhccHHHHHHHHHHc-------CCchhHHHHHHHHHHcCcHHHHHH-HHHHHH---h--CHhhHHHHHHH
Confidence 7899999999999999999999987 267899999999999999999987 333321 2 22234468889
Q ss_pred HHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHh--cCCHHHHHHHHHHHHhhCCCCC------CHHHHHHHHHHH
Q 015370 309 YAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLM--LGHLKEVGEIIDQWKQSATSDF------DISACNRLLGAF 380 (408)
Q Consensus 309 ~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~--~g~~~~A~~~~~~~~~~~~~~~------~~~~~~~li~~~ 380 (408)
|.+.|.+++|..+++...... +--...|+.+..+|++ -+++.+.++.|..-+ + ++| +...|..++-.|
T Consensus 217 Yek~G~~eEai~lLe~aL~le-~ah~~~ftel~il~~ky~p~k~~ehl~~~~~~i--n-i~k~~~~~~~~~~w~e~~~ly 292 (449)
T 1b89_A 217 YQDRGYFEELITMLEAALGLE-RAHMGMFTELAILYSKFKPQKMREHLELFWSRV--N-IPKVLRAAEQAHLWAELVFLY 292 (449)
T ss_dssp HHHTTCHHHHHHHHHHHTTST-TCCHHHHHHHHHHHHTTCHHHHHHHHHHHSTTS--C-HHHHHHHHHTTTCHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHhCCc-HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh--c-CcHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999765443 2244556667666664 345555555554211 1 222 455688888889
Q ss_pred HhcCChHHHHHH
Q 015370 381 SDVGLTEKANEF 392 (408)
Q Consensus 381 ~~~g~~~~a~~~ 392 (408)
...++++.|...
T Consensus 293 ~~~~e~d~A~~t 304 (449)
T 1b89_A 293 DKYEEYDNAIIT 304 (449)
T ss_dssp HHTTCHHHHHHH
T ss_pred HhhchHHHHHHH
Confidence 999999988763
No 28
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.72 E-value=3.2e-15 Score=127.70 Aligned_cols=226 Identities=9% Similarity=-0.032 Sum_probs=165.5
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCC--CC----HHHH
Q 015370 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVV--PD----IFTY 230 (408)
Q Consensus 157 ~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~--p~----~~~~ 230 (408)
...|..+...+...|++++|...|++..+.. .+..+|..+...+...|++++|...+++..+.... |+ ..++
T Consensus 5 a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~--~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~ 82 (258)
T 3uq3_A 5 ADKEKAEGNKFYKARQFDEAIEHYNKAWELH--KDITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISKSF 82 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--CCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHHHH
Confidence 4567777778888888888888888877766 67778888888888888888888888877653211 12 4677
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHH
Q 015370 231 NLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYA 310 (408)
Q Consensus 231 ~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~ 310 (408)
..+...+...|++++|...|+++.+. .|+. ..+.+.|++++|.. .+..+....+. +...|..+...+.
T Consensus 83 ~~l~~~~~~~~~~~~A~~~~~~a~~~---~~~~-------~~~~~~~~~~~a~~-~~~~~~~~~~~-~~~~~~~~~~~~~ 150 (258)
T 3uq3_A 83 ARIGNAYHKLGDLKKTIEYYQKSLTE---HRTA-------DILTKLRNAEKELK-KAEAEAYVNPE-KAEEARLEGKEYF 150 (258)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH---CCCH-------HHHHHHHHHHHHHH-HHHHHHHCCHH-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHhc---Cchh-------HHHHHHhHHHHHHH-HHHHHHHcCcc-hHHHHHHHHHHHH
Confidence 77777888888888888888887763 2332 34666677888888 77766654332 5567777788888
Q ss_pred hcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHhcCChHHHH
Q 015370 311 GLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 390 (408)
Q Consensus 311 ~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~ 390 (408)
..|++++|.+.+++..+.... +...+..+...+...|++++|...+++..+.. +.+...|..+..++.+.|++++|.
T Consensus 151 ~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~--~~~~~~~~~l~~~~~~~g~~~~A~ 227 (258)
T 3uq3_A 151 TKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAIEKD--PNFVRAYIRKATAQIAVKEYASAL 227 (258)
T ss_dssp HTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HhcCHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHhhHHHHH
Confidence 888888888888877765432 56667778888888888888888888887754 345777778888888888888888
Q ss_pred HHHHHHHhc
Q 015370 391 EFHMLLLQK 399 (408)
Q Consensus 391 ~~~~~m~~~ 399 (408)
+.+++..+.
T Consensus 228 ~~~~~a~~~ 236 (258)
T 3uq3_A 228 ETLDAARTK 236 (258)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 888877663
No 29
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=99.72 E-value=2.8e-17 Score=147.08 Aligned_cols=240 Identities=8% Similarity=0.038 Sum_probs=106.5
Q ss_pred hcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHHHHhcCCCCCCCHHHHHHHHHHHHcCCCHHHHHHH
Q 015370 100 KSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEEL 179 (408)
Q Consensus 100 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~A~~~ 179 (408)
+.|+.++|.++++++. ++..|..++.++.+.|++++|++.|.+. +|...|..++.++...|++++|++.
T Consensus 15 ~~~~ld~A~~fae~~~-------~~~vWs~La~A~l~~g~~~eAIdsfika----~D~~~y~~V~~~ae~~g~~EeAi~y 83 (449)
T 1b89_A 15 HIGNLDRAYEFAERCN-------EPAVWSQLAKAQLQKGMVKEAIDSYIKA----DDPSSYMEVVQAANTSGNWEELVKY 83 (449)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HccCHHHHHHHHHhCC-------ChHHHHHHHHHHHHcCCHHHHHHHHHcC----CCHHHHHHHHHHHHhCCCHHHHHHH
Confidence 5678999999999982 2359999999999999999999999653 6778999999999999999999998
Q ss_pred HHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCC
Q 015370 180 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG 259 (408)
Q Consensus 180 ~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~ 259 (408)
++..++. .+++.+.+.++.+|.+.|+++++.++++ .|+..+|..+...|...|++++|..+|..+
T Consensus 84 l~~ark~--~~~~~i~~~Li~~Y~Klg~l~e~e~f~~-------~pn~~a~~~IGd~~~~~g~yeeA~~~Y~~a------ 148 (449)
T 1b89_A 84 LQMARKK--ARESYVETELIFALAKTNRLAELEEFIN-------GPNNAHIQQVGDRCYDEKMYDAAKLLYNNV------ 148 (449)
T ss_dssp ---------------------------CHHHHTTTTT-------CC----------------CTTTHHHHHHHT------
T ss_pred HHHHHHh--CccchhHHHHHHHHHHhCCHHHHHHHHc-------CCcHHHHHHHHHHHHHcCCHHHHHHHHHHh------
Confidence 8877764 4568899999999999999999998885 378889999999999999999999999987
Q ss_pred CCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHH
Q 015370 260 SDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 339 (408)
Q Consensus 260 ~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ 339 (408)
..|..++.++.+.|++++|.+ .+.++ .++.+|..++.+|...|+++.|...... +...+.....
T Consensus 149 ----~n~~~LA~~L~~Lg~yq~AVe-a~~KA------~~~~~Wk~v~~aCv~~~ef~lA~~~~l~-----L~~~ad~l~~ 212 (449)
T 1b89_A 149 ----SNFGRLASTLVHLGEYQAAVD-GARKA------NSTRTWKEVCFACVDGKEFRLAQMCGLH-----IVVHADELEE 212 (449)
T ss_dssp ----TCHHHHHHHHHTTTCHHHHHH-HHHHH------TCHHHHHHHHHHHHHTTCHHHHHHTTTT-----TTTCHHHHHH
T ss_pred ----hhHHHHHHHHHHhccHHHHHH-HHHHc------CCchhHHHHHHHHHHcCcHHHHHHHHHH-----HHhCHhhHHH
Confidence 258899999999999999999 77766 3778999999999999999999665543 2233344557
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHhc
Q 015370 340 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDV 383 (408)
Q Consensus 340 li~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~li~~~~~~ 383 (408)
++..|.+.|++++|..+++...... +-....|+-|.-+|++-
T Consensus 213 lv~~Yek~G~~eEai~lLe~aL~le--~ah~~~ftel~il~~ky 254 (449)
T 1b89_A 213 LINYYQDRGYFEELITMLEAALGLE--RAHMGMFTELAILYSKF 254 (449)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHTTST--TCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHCCCHHHHHHHHHHHhCCc--HHHHHHHHHHHHHHHhc
Confidence 9999999999999999999987543 45677788777777764
No 30
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=99.72 E-value=2.4e-13 Score=127.77 Aligned_cols=274 Identities=8% Similarity=-0.002 Sum_probs=147.3
Q ss_pred cccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHh----hcChHHHHHHHhcCCCCCCCHHHHHHHHHHHHc----CCC
Q 015370 101 SQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTK----VFGIHSGERYFEGLPLSAKTSETYTALLHLYAG----AKW 172 (408)
Q Consensus 101 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~----~g~~~~a~~~~~~~~~~~~~~~~~~~ll~~~~~----~~~ 172 (408)
.+++++|++.|++..+.| ++..+..+...|.. .+++++|.++|++.... .+...+..|...|.. .++
T Consensus 128 ~~~~~~A~~~~~~a~~~~----~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~-~~~~a~~~Lg~~y~~g~g~~~~ 202 (490)
T 2xm6_A 128 KVDKAESVKWFRLAAEQG----RDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQ-GNVWSCNQLGYMYSRGLGVERN 202 (490)
T ss_dssp CCCHHHHHHHHHHHHHTT----CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHTSSSCCC
T ss_pred CCCHHHHHHHHHHHHHCC----CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC-CCHHHHHHHHHHHhcCCCCCcC
Confidence 344444444444444432 23334444444443 34444454444443322 244444445444444 455
Q ss_pred HHHHHHHHHHHHhCCCCCChhhHHHHHHHHHh----cCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHh----cCCHH
Q 015370 173 TEKAEELFERVKQSNLSFNALMYNEMMTLYMS----VGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA----TLNID 244 (408)
Q Consensus 173 ~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~----~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~----~g~~~ 244 (408)
.++|.+.|++..+.| +..++..+...|.. .+++++|...|++..+.| +...+..+...|.. .++++
T Consensus 203 ~~~A~~~~~~a~~~~---~~~a~~~lg~~y~~g~g~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~y~~g~~~~~d~~ 276 (490)
T 2xm6_A 203 DAISAQWYRKSATSG---DELGQLHLADMYYFGIGVTQDYTQSRVLFSQSAEQG---NSIAQFRLGYILEQGLAGAKEPL 276 (490)
T ss_dssp HHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHTTT---CHHHHHHHHHHHHHTTTSSCCHH
T ss_pred HHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHCCCCCCCCHH
Confidence 555555555555443 34444445555443 455555555555555432 23344444444444 55666
Q ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHc-----CchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcC---CHH
Q 015370 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA-----SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG---NKD 316 (408)
Q Consensus 245 ~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~-----~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~---~~~ 316 (408)
+|...|++..+. + +...+..+...|... +++++|.. .+....+.+ +...+..+...|...| +.+
T Consensus 277 ~A~~~~~~a~~~-~---~~~a~~~Lg~~y~~~~~g~~~~~~~A~~-~~~~a~~~~---~~~a~~~lg~~y~~~g~~~~~~ 348 (490)
T 2xm6_A 277 KALEWYRKSAEQ-G---NSDGQYYLAHLYDKGAEGVAKNREQAIS-WYTKSAEQG---DATAQANLGAIYFRLGSEEEHK 348 (490)
T ss_dssp HHHHHHHHHHTT-T---CHHHHHHHHHHHHHCBTTBCCCHHHHHH-HHHHHHHTT---CHHHHHHHHHHHHHSCCHHHHH
T ss_pred HHHHHHHHHHHc-C---CHHHHHHHHHHHHcCCCCCcCCHHHHHH-HHHHHHhcC---CHHHHHHHHHHHHhCCCcccHH
Confidence 666666665542 2 334455555555555 56666666 555554442 2345555555555544 566
Q ss_pred HHHHHHHHHHhccCCCChhhHHHHHHHHHh----cCCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHh----cCChHH
Q 015370 317 KIDQIWKSLRMTKQKMTSRNYICILSSYLM----LGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSD----VGLTEK 388 (408)
Q Consensus 317 ~a~~~~~~m~~~~~~p~~~~~~~li~~~~~----~g~~~~A~~~~~~~~~~~~~~~~~~~~~~li~~~~~----~g~~~~ 388 (408)
+|.+.|++..+.| +...+..+...|.. .+++++|..+|++..+.+ +...+..|...|.+ .+++++
T Consensus 349 ~A~~~~~~a~~~~---~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~----~~~a~~~Lg~~y~~g~g~~~d~~~ 421 (490)
T 2xm6_A 349 KAVEWFRKAAAKG---EKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQG----LSAAQVQLGEIYYYGLGVERDYVQ 421 (490)
T ss_dssp HHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT----CHHHHHHHHHHHHHTSSSCCCHHH
T ss_pred HHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCC----CHHHHHHHHHHHHcCCCCCCCHHH
Confidence 6666666665543 44556666666666 677777777777776643 35556667777766 677777
Q ss_pred HHHHHHHHHhcC
Q 015370 389 ANEFHMLLLQKN 400 (408)
Q Consensus 389 a~~~~~~m~~~g 400 (408)
|...|++..+.|
T Consensus 422 A~~~~~~A~~~~ 433 (490)
T 2xm6_A 422 AWAWFDTASTND 433 (490)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHCC
Confidence 777777776655
No 31
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=99.71 E-value=2.8e-13 Score=127.33 Aligned_cols=305 Identities=11% Similarity=0.020 Sum_probs=250.7
Q ss_pred CCCCcHHHHHHHHHHcCCCCChhhHHHHHHHHHh----cccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHh----hc
Q 015370 67 LPKRSATNVIQRWVSEGNQATVSELRHILKELRK----SQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTK----VF 138 (408)
Q Consensus 67 ~~~~~a~~~l~~~~~~g~~~~~~~~~~li~~~~~----~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~----~g 138 (408)
.+.+.|...++...+.| ++..+..|...|.. .+++++|++.|++..+.| ++..+..+...|.. .+
T Consensus 57 ~~~~~A~~~~~~a~~~~---~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~----~~~a~~~Lg~~y~~g~g~~~ 129 (490)
T 2xm6_A 57 KDLTQAMDWFRRAAEQG---YTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALKG----LPQAQQNLGVMYHEGNGVKV 129 (490)
T ss_dssp CCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT----CHHHHHHHHHHHHHTSSSCC
T ss_pred cCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC----CHHHHHHHHHHHHcCCCCCC
Confidence 34456777777777664 56778888888888 899999999999998865 56777778888887 78
Q ss_pred ChHHHHHHHhcCCCCCCCHHHHHHHHHHHHc----CCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHh----cCCHHH
Q 015370 139 GIHSGERYFEGLPLSAKTSETYTALLHLYAG----AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMS----VGQVEK 210 (408)
Q Consensus 139 ~~~~a~~~~~~~~~~~~~~~~~~~ll~~~~~----~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~----~g~~~~ 210 (408)
++++|.++|++.... .+...+..|...|.. .++.++|.+.|++..+.| +..++..+...|.. .+++++
T Consensus 130 ~~~~A~~~~~~a~~~-~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~~---~~~a~~~Lg~~y~~g~g~~~~~~~ 205 (490)
T 2xm6_A 130 DKAESVKWFRLAAEQ-GRDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQG---NVWSCNQLGYMYSRGLGVERNDAI 205 (490)
T ss_dssp CHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHH
T ss_pred CHHHHHHHHHHHHHC-CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHhcCCCCCcCHHH
Confidence 999999999987653 467888888888887 789999999999999886 78899999999988 899999
Q ss_pred HHHHHHHHHhCCCCCCHHHHHHHHHHHHh----cCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHH----cCchhhh
Q 015370 211 VALVVEEIKRKNVVPDIFTYNLWISSCAA----TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT----ASHLVNA 282 (408)
Q Consensus 211 a~~~~~~m~~~g~~p~~~~~~~ll~~~~~----~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~----~~~~~~a 282 (408)
|...|++..+.| +..++..+...|.. .+++++|..+|++..+. + +...+..+...|.. .++.++|
T Consensus 206 A~~~~~~a~~~~---~~~a~~~lg~~y~~g~g~~~~~~~A~~~~~~a~~~-~---~~~a~~~lg~~y~~g~~~~~d~~~A 278 (490)
T 2xm6_A 206 SAQWYRKSATSG---DELGQLHLADMYYFGIGVTQDYTQSRVLFSQSAEQ-G---NSIAQFRLGYILEQGLAGAKEPLKA 278 (490)
T ss_dssp HHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHTT-T---CHHHHHHHHHHHHHTTTSSCCHHHH
T ss_pred HHHHHHHHHHCC---CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC-C---CHHHHHHHHHHHHCCCCCCCCHHHH
Confidence 999999998875 55677777777776 78999999999998874 3 55677788888888 8999999
Q ss_pred HHHHHHHHHHhcccCccchHHHHHHHHHhc-----CCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcC---CHHHHH
Q 015370 283 ESSTLVEAEKSITQRQWITYDFLIILYAGL-----GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLG---HLKEVG 354 (408)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~li~~~~~~-----~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g---~~~~A~ 354 (408)
.. .++...+.+ +...+..|...|... +++++|...|++..+.| +...+..+...|...| +.++|.
T Consensus 279 ~~-~~~~a~~~~---~~~a~~~Lg~~y~~~~~g~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~y~~~g~~~~~~~A~ 351 (490)
T 2xm6_A 279 LE-WYRKSAEQG---NSDGQYYLAHLYDKGAEGVAKNREQAISWYTKSAEQG---DATAQANLGAIYFRLGSEEEHKKAV 351 (490)
T ss_dssp HH-HHHHHHTTT---CHHHHHHHHHHHHHCBTTBCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHSCCHHHHHHHH
T ss_pred HH-HHHHHHHcC---CHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHHHhcC---CHHHHHHHHHHHHhCCCcccHHHHH
Confidence 99 888776553 445777788888887 89999999999988765 4456677777777756 889999
Q ss_pred HHHHHHHhhCCCCCCHHHHHHHHHHHHh----cCChHHHHHHHHHHHhcC
Q 015370 355 EIIDQWKQSATSDFDISACNRLLGAFSD----VGLTEKANEFHMLLLQKN 400 (408)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~li~~~~~----~g~~~~a~~~~~~m~~~g 400 (408)
++|++..+.+ +...+..|...|.. .+++++|...|++..+.|
T Consensus 352 ~~~~~a~~~~----~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~ 397 (490)
T 2xm6_A 352 EWFRKAAAKG----EKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQG 397 (490)
T ss_dssp HHHHHHHHTT----CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHCC----CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCC
Confidence 9999998754 57778889999988 899999999999988865
No 32
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.71 E-value=4.1e-15 Score=123.85 Aligned_cols=200 Identities=17% Similarity=0.070 Sum_probs=119.9
Q ss_pred CCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Q 015370 189 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 268 (408)
Q Consensus 189 ~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~ 268 (408)
|++...+..+...+.+.|++++|...|++..+.... +...+..+..++.+.|++++|...+++..+. .+.+...+..
T Consensus 2 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~--~P~~~~a~~~ 78 (217)
T 2pl2_A 2 QTAEQNPLRLGVQLYALGRYDAALTLFERALKENPQ-DPEALYWLARTQLKLGLVNPALENGKTLVAR--TPRYLGGYMV 78 (217)
T ss_dssp --CCHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCcHHHHHH
Confidence 344455555555555555555555555555543221 3445555555555555555555555555542 2334445555
Q ss_pred HHHHHHHc-----------CchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhH
Q 015370 269 LVNIYITA-----------SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 337 (408)
Q Consensus 269 li~~~~~~-----------~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~ 337 (408)
+...+.+. |++++|.. .+.+..+..+. +...|..+...+...|++++|+..|++..+.. .+...+
T Consensus 79 lg~~~~~~~~~~~~~~~~~g~~~~A~~-~~~~al~~~P~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~--~~~~~~ 154 (217)
T 2pl2_A 79 LSEAYVALYRQAEDRERGKGYLEQALS-VLKDAERVNPR-YAPLHLQRGLVYALLGERDKAEASLKQALALE--DTPEIR 154 (217)
T ss_dssp HHHHHHHHHHTCSSHHHHHHHHHHHHH-HHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--CCHHHH
T ss_pred HHHHHHHhhhhhhhhcccccCHHHHHH-HHHHHHHhCcc-cHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc--cchHHH
Confidence 55555555 78888887 77776665443 56677777778888888888888888877766 566777
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHH
Q 015370 338 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 397 (408)
Q Consensus 338 ~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~ 397 (408)
..+..+|...|++++|...|++..+.. +.+...+..+...+.+.|++++|.+.+++..
T Consensus 155 ~~la~~~~~~g~~~~A~~~~~~al~~~--P~~~~~~~~la~~~~~~g~~~~A~~~~~~~~ 212 (217)
T 2pl2_A 155 SALAELYLSMGRLDEALAQYAKALEQA--PKDLDLRVRYASALLLKGKAEEAARAAALEH 212 (217)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHS--TTCHHHHHHHHHHHTC---------------
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhC--CCChHHHHHHHHHHHHccCHHHHHHHHHHHh
Confidence 778888888888888888888887754 3466777778888888888888888877654
No 33
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.70 E-value=1.8e-13 Score=130.00 Aligned_cols=324 Identities=7% Similarity=-0.000 Sum_probs=220.9
Q ss_pred CCCCcHHHHHHHHHHcCCCCChhhHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHH-HhhcChHHHHH
Q 015370 67 LPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLM-TKVFGIHSGER 145 (408)
Q Consensus 67 ~~~~~a~~~l~~~~~~g~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~-~~~g~~~~a~~ 145 (408)
.+.+.|..++++..+. .+-+...|...+..+.+.|++++|..+|++.... .|+...|...+... ...|+.+.|.+
T Consensus 26 ~~~~~a~~~~e~al~~-~P~~~~~w~~~~~~~~~~~~~~~a~~~~~ral~~---~p~~~lw~~~~~~~~~~~~~~~~a~~ 101 (530)
T 2ooe_A 26 QPIDKARKTYERLVAQ-FPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMK---VLHIDLWKCYLSYVRETKGKLPSYKE 101 (530)
T ss_dssp SCHHHHHHHHHHHHTT-CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTT---CCCHHHHHHHHHHHHHHTTTSTTHHH
T ss_pred CCHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc---CCChHHHHHHHHHHHHHccchhhHHH
Confidence 4556778888887765 4557778889999999999999999999999875 46777777766533 45577766654
Q ss_pred ----HHhcCC----CCCCCHHHHHHHHHHHHc---------CCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHH------
Q 015370 146 ----YFEGLP----LSAKTSETYTALLHLYAG---------AKWTEKAEELFERVKQSNLSFNALMYNEMMTLY------ 202 (408)
Q Consensus 146 ----~~~~~~----~~~~~~~~~~~ll~~~~~---------~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~------ 202 (408)
+|+... ...++...|...+....+ .|++++|..+|++.+.....+....|.......
T Consensus 102 ~~~~~~~~al~~~g~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~a~~~y~~al~~P~~~~~~~~~~~~~~e~~~~~~ 181 (530)
T 2ooe_A 102 KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPMINIEQLWRDYNKYEEGINIH 181 (530)
T ss_dssp HHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHSCCCSSTTHHHHHHHHHHHHHHHTTSCCTTHHHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHCCCCcccHHHHHHHHHHHhcCCCcccHHHHhHHHHHHHHHHHHHhchhhhHHHHHHHHHHHHHhhchh
Confidence 665532 223467788888877654 688999999999998831111123333221110
Q ss_pred -------HhcCCHHHHH------------------------------------------------------------HHH
Q 015370 203 -------MSVGQVEKVA------------------------------------------------------------LVV 215 (408)
Q Consensus 203 -------~~~g~~~~a~------------------------------------------------------------~~~ 215 (408)
.+.++++.|. .+|
T Consensus 182 ~~~~~l~~~~~~~~~A~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~w~~~~~~e~~~~~~~~~~~~~~~~a~~~y 261 (530)
T 2ooe_A 182 LAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQNTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAY 261 (530)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHHHHHHHHHCCSSSCCCCCC--CCHHHHHHHHHHHHHHHHHCSSCCSCSHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccccccCCCCCChhHHHHHHHHHHHHHHHHcCCccCCcchhHHHHHHHHH
Confidence 0112233333 333
Q ss_pred HHHHhCCCCCCHHHHHHHHHHHHh-------cCCHH-------HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhh
Q 015370 216 EEIKRKNVVPDIFTYNLWISSCAA-------TLNID-------QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 281 (408)
Q Consensus 216 ~~m~~~g~~p~~~~~~~ll~~~~~-------~g~~~-------~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~ 281 (408)
++..... +-+...|..+...+.+ .|+++ +|..++++..+. -.+.+...|..++..+.+.|++++
T Consensus 262 ~~al~~~-p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~-~~p~~~~l~~~~~~~~~~~g~~~~ 339 (530)
T 2ooe_A 262 EQCLLVL-GHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAIST-LLKKNMLLYFAYADYEESRMKYEK 339 (530)
T ss_dssp HHHHHHH-TTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTT-TCSSCHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHhC-CCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHH-hCcccHHHHHHHHHHHHhcCCHHH
Confidence 3333321 1134455555555554 68876 889999998862 245567889999999999999999
Q ss_pred hHHHHHHHHHHhcccCccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHH-HHHhcCCHHHHHHHHHHH
Q 015370 282 AESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILS-SYLMLGHLKEVGEIIDQW 360 (408)
Q Consensus 282 a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~-~~~~~g~~~~A~~~~~~~ 360 (408)
|.. +++++.+..+......|..++..+.+.|++++|.++|++..+... .+...|..... .+...|+.++|..+|++.
T Consensus 340 A~~-~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~-~~~~~~~~~a~~~~~~~~~~~~A~~~~e~a 417 (530)
T 2ooe_A 340 VHS-IYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDAR-TRHHVYVTAALMEYYCSKDKSVAFKIFELG 417 (530)
T ss_dssp HHH-HHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTT-CCTHHHHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred HHH-HHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccC-CchHHHHHHHHHHHHHcCChhHHHHHHHHH
Confidence 999 888887753321135788888888889999999999998776532 12223322222 233689999999999998
Q ss_pred HhhCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcC
Q 015370 361 KQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKN 400 (408)
Q Consensus 361 ~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g 400 (408)
.+.. +.+...|..++..+.+.|+.++|..+|++.+..+
T Consensus 418 l~~~--p~~~~~~~~~~~~~~~~g~~~~Ar~~~~~al~~~ 455 (530)
T 2ooe_A 418 LKKY--GDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSG 455 (530)
T ss_dssp HHHH--TTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHSC
T ss_pred HHHC--CCCHHHHHHHHHHHHhCCCHhhHHHHHHHHHhcc
Confidence 8764 3467889999999999999999999999998753
No 34
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.68 E-value=1.7e-14 Score=124.42 Aligned_cols=197 Identities=10% Similarity=0.016 Sum_probs=116.0
Q ss_pred hhHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHHHHhcCCCCCCC----HHHHHHHH
Q 015370 89 SELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKT----SETYTALL 164 (408)
Q Consensus 89 ~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~----~~~~~~ll 164 (408)
..+......+...|++++|++.|+...+.. +.+...+..+..++...|++++|+..|++....+++ ..+|..+.
T Consensus 4 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~--p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~lg 81 (272)
T 3u4t_A 4 DVEFRYADFLFKNNNYAEAIEVFNKLEAKK--YNSPYIYNRRAVCYYELAKYDLAQKDIETYFSKVNATKAKSADFEYYG 81 (272)
T ss_dssp -CHHHHHHHHHTTTCHHHHHHHHHHHHHTT--CCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHTTSCTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhC--CCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccCchhHHHHHHHHHH
Confidence 345556666777777777777777777653 334446666666777777777777776665543222 33466666
Q ss_pred HHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHH
Q 015370 165 HLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244 (408)
Q Consensus 165 ~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~ 244 (408)
..+...|++++|++.|++..+.. +.+..+|..+...|...|++++|...|++..+... .+...+..+...+...++++
T Consensus 82 ~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~-~~~~~~~~l~~~~~~~~~~~ 159 (272)
T 3u4t_A 82 KILMKKGQDSLAIQQYQAAVDRD-TTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTT-TDPKVFYELGQAYYYNKEYV 159 (272)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHS-TTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSC-CCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHcccHHHHHHHHHHHHhcC-cccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCC-CcHHHHHHHHHHHHHHHHHH
Confidence 67777777777777777666643 33455666666666666666666666666665422 23444444442333344666
Q ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCc---hhhhHHHHHHHHHH
Q 015370 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH---LVNAESSTLVEAEK 292 (408)
Q Consensus 245 ~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~---~~~a~~~~~~~~~~ 292 (408)
+|.+.|+++.+. .+.+...+..+...+...|+ .++|.. .+++..+
T Consensus 160 ~A~~~~~~a~~~--~p~~~~~~~~~~~~~~~~~~~~~~~~A~~-~~~~a~~ 207 (272)
T 3u4t_A 160 KADSSFVKVLEL--KPNIYIGYLWRARANAAQDPDTKQGLAKP-YYEKLIE 207 (272)
T ss_dssp HHHHHHHHHHHH--STTCHHHHHHHHHHHHHHSTTCSSCTTHH-HHHHHHH
T ss_pred HHHHHHHHHHHh--CccchHHHHHHHHHHHHcCcchhhHHHHH-HHHHHHH
Confidence 666666666652 23334555555555555555 555555 4444443
No 35
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.68 E-value=1.4e-14 Score=124.97 Aligned_cols=246 Identities=12% Similarity=0.017 Sum_probs=147.5
Q ss_pred HHHHHHHHHHHhhcChHHHHHHHhcCCCCCC-CHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCC--hhhHHHHHHH
Q 015370 125 SDYATRIDLMTKVFGIHSGERYFEGLPLSAK-TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFN--ALMYNEMMTL 201 (408)
Q Consensus 125 ~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~-~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~--~~~~~~li~~ 201 (408)
..+......+...|++++|+..|++.....| +...+..+..++...|++++|++.+++..+.+-.|+ ..+|..+...
T Consensus 4 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~lg~~ 83 (272)
T 3u4t_A 4 DVEFRYADFLFKNNNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYYELAKYDLAQKDIETYFSKVNATKAKSADFEYYGKI 83 (272)
T ss_dssp -CHHHHHHHHHTTTCHHHHHHHHHHHHHTTCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHTTSCTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccCchhHHHHHHHHHHHH
Confidence 3444555666777777777777776555433 345667777777777777777777777766321111 2236677777
Q ss_pred HHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhh
Q 015370 202 YMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 281 (408)
Q Consensus 202 ~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~ 281 (408)
+...|++++|...|++..+.... +..++..+...+...|++++|...+++..+. .+.+...+..+...+...+++++
T Consensus 84 ~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~--~~~~~~~~~~l~~~~~~~~~~~~ 160 (272)
T 3u4t_A 84 LMKKGQDSLAIQQYQAAVDRDTT-RLDMYGQIGSYFYNKGNFPLAIQYMEKQIRP--TTTDPKVFYELGQAYYYNKEYVK 160 (272)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSTT-CTHHHHHHHHHHHHTTCHHHHHHHHGGGCCS--SCCCHHHHHHHHHHHHHTTCHHH
T ss_pred HHHcccHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHccCHHHHHHHHHHHhhc--CCCcHHHHHHHHHHHHHHHHHHH
Confidence 77777777777777777664322 4456666777777777777777777776663 34455556666623333447777
Q ss_pred hHHHHHHHHHHhcccCccchHHHHHHHHHhcCC---HHHHHHHHHHHHhcc-CCCCh------hhHHHHHHHHHhcCCHH
Q 015370 282 AESSTLVEAEKSITQRQWITYDFLIILYAGLGN---KDKIDQIWKSLRMTK-QKMTS------RNYICILSSYLMLGHLK 351 (408)
Q Consensus 282 a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~---~~~a~~~~~~m~~~~-~~p~~------~~~~~li~~~~~~g~~~ 351 (408)
|.. .+..+.+..+. +...+..+...+...|+ +++|...+++..+.. ..|+. ..|..+...|.+.|+++
T Consensus 161 A~~-~~~~a~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 238 (272)
T 3u4t_A 161 ADS-SFVKVLELKPN-IYIGYLWRARANAAQDPDTKQGLAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYYTINRDKV 238 (272)
T ss_dssp HHH-HHHHHHHHSTT-CHHHHHHHHHHHHHHSTTCSSCTTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHH-HHHHHHHhCcc-chHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHcCCHH
Confidence 777 66666554332 34555566666666666 666766666655432 11221 34555666666677777
Q ss_pred HHHHHHHHHHhhCCCCCCHHHHHHHH
Q 015370 352 EVGEIIDQWKQSATSDFDISACNRLL 377 (408)
Q Consensus 352 ~A~~~~~~~~~~~~~~~~~~~~~~li 377 (408)
+|...+++..+.. +.+...+..+.
T Consensus 239 ~A~~~~~~al~~~--p~~~~a~~~l~ 262 (272)
T 3u4t_A 239 KADAAWKNILALD--PTNKKAIDGLK 262 (272)
T ss_dssp HHHHHHHHHHHHC--TTCHHHHHHHC
T ss_pred HHHHHHHHHHhcC--ccHHHHHHHhh
Confidence 7777777766643 33455444443
No 36
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.67 E-value=9.7e-15 Score=124.63 Aligned_cols=222 Identities=12% Similarity=0.005 Sum_probs=114.5
Q ss_pred hhHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHHHHhcCCCCCC----C----HHHH
Q 015370 89 SELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAK----T----SETY 160 (408)
Q Consensus 89 ~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~----~----~~~~ 160 (408)
..+..+...+...|++++|++.|+...+.. .+...+..+..++...|++++|...|++.....| + ..+|
T Consensus 6 ~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~---~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~ 82 (258)
T 3uq3_A 6 DKEKAEGNKFYKARQFDEAIEHYNKAWELH---KDITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISKSF 82 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHS---CCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHHHH
Confidence 445566666666667777777666666542 4555566666666666666666665555433211 1 3445
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhc
Q 015370 161 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 240 (408)
Q Consensus 161 ~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~ 240 (408)
..+...+.+.|++++|...|++..... |+. ..+...
T Consensus 83 ~~l~~~~~~~~~~~~A~~~~~~a~~~~--~~~------------------------------------------~~~~~~ 118 (258)
T 3uq3_A 83 ARIGNAYHKLGDLKKTIEYYQKSLTEH--RTA------------------------------------------DILTKL 118 (258)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC--CCH------------------------------------------HHHHHH
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHhcC--chh------------------------------------------HHHHHH
Confidence 555555555555555555555554432 221 223334
Q ss_pred CCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCHHHHHH
Q 015370 241 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQ 320 (408)
Q Consensus 241 g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~ 320 (408)
|++++|...++++... .+.+...+..+...+...|++++|.. .+.......+. +...|..+...+...|++++|..
T Consensus 119 ~~~~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~A~~-~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~ 194 (258)
T 3uq3_A 119 RNAEKELKKAEAEAYV--NPEKAEEARLEGKEYFTKSDWPNAVK-AYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIA 194 (258)
T ss_dssp HHHHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHH
T ss_pred hHHHHHHHHHHHHHHc--CcchHHHHHHHHHHHHHhcCHHHHHH-HHHHHHhcCcc-cHHHHHHHHHHHHHhCCHHHHHH
Confidence 4445555555554441 12233444455555555555555555 44444443322 34445555555555555555555
Q ss_pred HHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 015370 321 IWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ 362 (408)
Q Consensus 321 ~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~ 362 (408)
.+++..+... .+...|..+...+.+.|++++|...+++..+
T Consensus 195 ~~~~al~~~~-~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 235 (258)
T 3uq3_A 195 DCNKAIEKDP-NFVRAYIRKATAQIAVKEYASALETLDAART 235 (258)
T ss_dssp HHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCH-HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 5555544421 1344455555556666666666666655544
No 37
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.67 E-value=1.1e-14 Score=121.16 Aligned_cols=198 Identities=14% Similarity=0.024 Sum_probs=119.5
Q ss_pred CCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHH
Q 015370 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 234 (408)
Q Consensus 155 ~~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll 234 (408)
++...+..+...+.+.|++++|...|++..+.. |.+...|..+...+.+.|++++|...|++..+.... +...+..+.
T Consensus 3 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg 80 (217)
T 2pl2_A 3 TAEQNPLRLGVQLYALGRYDAALTLFERALKEN-PQDPEALYWLARTQLKLGLVNPALENGKTLVARTPR-YLGGYMVLS 80 (217)
T ss_dssp -CCHHHHHHHHHHHHTTCHHHHHHHHHHHHTTS-SSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHH
Confidence 345556666666666666666666666666554 345556666666666666666666666666654322 445555666
Q ss_pred HHHHhc-----------CCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHH
Q 015370 235 SSCAAT-----------LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 303 (408)
Q Consensus 235 ~~~~~~-----------g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 303 (408)
.++... |++++|...+++..+. .+.+...+..+...|...|++++|.. .+++..+.. .+...+.
T Consensus 81 ~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~--~P~~~~~~~~lg~~~~~~g~~~~A~~-~~~~al~~~--~~~~~~~ 155 (217)
T 2pl2_A 81 EAYVALYRQAEDRERGKGYLEQALSVLKDAERV--NPRYAPLHLQRGLVYALLGERDKAEA-SLKQALALE--DTPEIRS 155 (217)
T ss_dssp HHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHHC--CCHHHHH
T ss_pred HHHHHhhhhhhhhcccccCHHHHHHHHHHHHHh--CcccHHHHHHHHHHHHHcCChHHHHH-HHHHHHhcc--cchHHHH
Confidence 666666 7777777777777662 34456667777777777777777777 677766655 4666777
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHH
Q 015370 304 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW 360 (408)
Q Consensus 304 ~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~ 360 (408)
.+...|...|++++|...|++..+..+. +...+..+...+.+.|++++|...+++.
T Consensus 156 ~la~~~~~~g~~~~A~~~~~~al~~~P~-~~~~~~~la~~~~~~g~~~~A~~~~~~~ 211 (217)
T 2pl2_A 156 ALAELYLSMGRLDEALAQYAKALEQAPK-DLDLRVRYASALLLKGKAEEAARAAALE 211 (217)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHTC--------------
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 7777777777777777777776665322 4555666777777777777777777654
No 38
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.67 E-value=6.4e-14 Score=130.93 Aligned_cols=343 Identities=9% Similarity=-0.073 Sum_probs=225.1
Q ss_pred HHHhhhcCCCCcHHHHHHHHHHc--------CCCCChhhHHHHHHHHHhcccHHHHHHHHHHHHhcc-----CCCC-ChH
Q 015370 60 SRIFRISLPKRSATNVIQRWVSE--------GNQATVSELRHILKELRKSQRYKHALEISEWMVTHK-----EFVL-SDS 125 (408)
Q Consensus 60 ~~~~~~~~~~~~a~~~l~~~~~~--------g~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~-----~~~~-~~~ 125 (408)
+.+.......+.|.+.+++-.+. ..+....+|+.+...|...|++++|...+++..+.. ...+ ...
T Consensus 58 g~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~~ 137 (472)
T 4g1t_A 58 AYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIESPE 137 (472)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCCCHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchhhHH
Confidence 44444445666777766654331 123346789999999999999999999999876531 1112 245
Q ss_pred HHHHHHHHHHhh--cChHHHHHHHhcCCCCCC-CHHHHHHHHHH---HHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHH
Q 015370 126 DYATRIDLMTKV--FGIHSGERYFEGLPLSAK-TSETYTALLHL---YAGAKWTEKAEELFERVKQSNLSFNALMYNEMM 199 (408)
Q Consensus 126 ~~~~li~~~~~~--g~~~~a~~~~~~~~~~~~-~~~~~~~ll~~---~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li 199 (408)
++..+..++... +++++|+..|++.....| +...+..+..+ +...++.++|++.+++..+.+ +.+..++..+.
T Consensus 138 ~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~-p~~~~~~~~l~ 216 (472)
T 4g1t_A 138 LDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLN-PDNQYLKVLLA 216 (472)
T ss_dssp HHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHC-SSCHHHHHHHH
T ss_pred HHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcC-CcchHHHHHHH
Confidence 666666666654 468999999998766544 45666655554 455678889999999988765 44666777776
Q ss_pred HHHHh----cCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHH
Q 015370 200 TLYMS----VGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275 (408)
Q Consensus 200 ~~~~~----~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~ 275 (408)
..+.. .|++++|.+.+++...... .+..++..+...+...|++++|...+++..+. .+.+..++..+...|..
T Consensus 217 ~~~~~~~~~~~~~~~a~~~~~~al~~~~-~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~--~p~~~~~~~~lg~~y~~ 293 (472)
T 4g1t_A 217 LKLHKMREEGEEEGEGEKLVEEALEKAP-GVTDVLRSAAKFYRRKDEPDKAIELLKKALEY--IPNNAYLHCQIGCCYRA 293 (472)
T ss_dssp HHHHHCC------CHHHHHHHHHHHHCS-SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--STTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHhCc-cHHHHHHHHHHHHHHcCchHHHHHHHHHHHHh--CCChHHHHHHHHHHHHH
Confidence 66654 4678899999999887643 36778888999999999999999999999873 45567777777776643
Q ss_pred c-------------------CchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCChh-
Q 015370 276 A-------------------SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR- 335 (408)
Q Consensus 276 ~-------------------~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~- 335 (408)
. +..+.|.. .+....... +.+..++..+...|...|++++|++.|++..+....+...
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~A~~-~~~~a~~~~-~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~~~~~ 371 (472)
T 4g1t_A 294 KVFQVMNLRENGMYGKRKLLELIGHAVA-HLKKADEAN-DNLFRVCSILASLHALADQYEEAEYYFQKEFSKELTPVAKQ 371 (472)
T ss_dssp HHHHHHHC------CHHHHHHHHHHHHH-HHHHHHHHC-TTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCCHHHHH
T ss_pred HHHHhhhHHHHHHHHHHHHHhhHHHHHH-HHHHHhhcC-CchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCCChHHH
Confidence 2 23456666 566655543 3367788899999999999999999999988765433221
Q ss_pred -hHHHHHH-HHHhcCCHHHHHHHHHHHHhhCC----------------------CCCCHHHHHHHHHHHHhcCChHHHHH
Q 015370 336 -NYICILS-SYLMLGHLKEVGEIIDQWKQSAT----------------------SDFDISACNRLLGAFSDVGLTEKANE 391 (408)
Q Consensus 336 -~~~~li~-~~~~~g~~~~A~~~~~~~~~~~~----------------------~~~~~~~~~~li~~~~~~g~~~~a~~ 391 (408)
.+..+.. ...+.|+.++|+..|++..+... .+.+..+|..|...|...|++++|.+
T Consensus 372 ~~~~~~~~~~~~~~~~~~~Ai~~y~kal~i~~~~~~~~~~~~~l~~~~~~~l~~~p~~~~~~~~LG~~~~~~g~~~~A~~ 451 (472)
T 4g1t_A 372 LLHLRYGNFQLYQMKCEDKAIHHFIEGVKINQKSREKEKMKDKLQKIAKMRLSKNGADSEALHVLAFLQELNEKMQQADE 451 (472)
T ss_dssp HHHHHHHHHHHHTSSCHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHCC-CTTHHHHHHHHHHHHHHCC----
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHH
Confidence 1222222 34578999999999887654210 13456788999999999999999999
Q ss_pred HHHHHHhcC-CCCCCCCC
Q 015370 392 FHMLLLQKN-CAPTNASG 408 (408)
Q Consensus 392 ~~~~m~~~g-~~p~~~ty 408 (408)
.|++.++.| ..|+..+|
T Consensus 452 ~y~kALe~~~~~p~a~~~ 469 (472)
T 4g1t_A 452 DSERGLESGSLIPSASSW 469 (472)
T ss_dssp ------------------
T ss_pred HHHHHHhcCCCCCcHhhc
Confidence 999998864 35665543
No 39
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.67 E-value=2.3e-15 Score=130.01 Aligned_cols=221 Identities=14% Similarity=0.050 Sum_probs=117.8
Q ss_pred hcccHHHHHHHHHHHHhccCCC--CChHHHHHHHHHHHhhcChHHHHHHHhcCCCCC-CCHHHHHHHHHHHHcCCCHHHH
Q 015370 100 KSQRYKHALEISEWMVTHKEFV--LSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA-KTSETYTALLHLYAGAKWTEKA 176 (408)
Q Consensus 100 ~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~-~~~~~~~~ll~~~~~~~~~~~A 176 (408)
..|++++|++.|+.+.+..... .+...+..+...+...|++++|...|++..... .+..+|..+...+...|++++|
T Consensus 17 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A 96 (275)
T 1xnf_A 17 PTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAA 96 (275)
T ss_dssp CCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHH
T ss_pred ccchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHHH
Confidence 3467777777777777653111 124456666666666677777766666654442 3466666666666666666666
Q ss_pred HHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhcC
Q 015370 177 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCD 256 (408)
Q Consensus 177 ~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~ 256 (408)
.+.|++..+.. +.+..+|..+...|.+.|++++|...|+++.+.. |+.......+..+...|++++|...+++....
T Consensus 97 ~~~~~~al~~~-~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~--~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 173 (275)
T 1xnf_A 97 YEAFDSVLELD-PTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDD--PNDPFRSLWLYLAEQKLDEKQAKEVLKQHFEK 173 (275)
T ss_dssp HHHHHHHHHHC-TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcC-ccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhC--CCChHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 66666666543 3345666666666666666666666666666532 33333333334444556666666666555442
Q ss_pred CCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccC---ccchHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 015370 257 SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR---QWITYDFLIILYAGLGNKDKIDQIWKSLRM 327 (408)
Q Consensus 257 ~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~---~~~~~~~li~~~~~~~~~~~a~~~~~~m~~ 327 (408)
.+++...+. ++..+...++.++|.. .+.......+.. +...|..+...|...|++++|...|++...
T Consensus 174 --~~~~~~~~~-~~~~~~~~~~~~~a~~-~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 243 (275)
T 1xnf_A 174 --SDKEQWGWN-IVEFYLGNISEQTLME-RLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVA 243 (275)
T ss_dssp --SCCCSTHHH-HHHHHTTSSCHHHHHH-HHHHHCCSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred --CCcchHHHH-HHHHHHHhcCHHHHHH-HHHHHhcccccccccccHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 122222222 4444444455555555 444333222110 123444444444444555555554444443
No 40
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.67 E-value=1.4e-13 Score=114.84 Aligned_cols=204 Identities=13% Similarity=0.025 Sum_probs=143.4
Q ss_pred CHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHH
Q 015370 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235 (408)
Q Consensus 156 ~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~ 235 (408)
+...|..+...+...|++++|.+.|+++.+.. +.+..+|..+...|...|++++|...++++..... .+..++..+..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~-~~~~~~~~l~~ 84 (225)
T 2vq2_A 7 VSNIKTQLAMEYMRGQDYRQATASIEDALKSD-PKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKP-DSAEINNNYGW 84 (225)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhC-ccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCC-CChHHHHHHHH
Confidence 45667777777888888888888888777654 34566777777888888888888888887776532 25667777777
Q ss_pred HHHhc-CCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCC
Q 015370 236 SCAAT-LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 314 (408)
Q Consensus 236 ~~~~~-g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~ 314 (408)
.+... |++++|...++++.+....+.+...+..+...+...|++++|.. .+..+.+..+. +...+..+...+...|+
T Consensus 85 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~-~~~~~~~~~~~-~~~~~~~la~~~~~~~~ 162 (225)
T 2vq2_A 85 FLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEA-YLKRSLAAQPQ-FPPAFKELARTKMLAGQ 162 (225)
T ss_dssp HHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHHSTT-CHHHHHHHHHHHHHHTC
T ss_pred HHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHH-HHHHHHHhCCC-CchHHHHHHHHHHHcCC
Confidence 77788 88888888888777621122335667777777788888888877 77766655432 45667777777777788
Q ss_pred HHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q 015370 315 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 363 (408)
Q Consensus 315 ~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~ 363 (408)
+++|.+.+++..+.....+...+..+...+...|+.++|..+++.+.+.
T Consensus 163 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 211 (225)
T 2vq2_A 163 LGDADYYFKKYQSRVEVLQADDLLLGWKIAKALGNAQAAYEYEAQLQAN 211 (225)
T ss_dssp HHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHh
Confidence 8888887777766543235555666666777777888887777777654
No 41
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.66 E-value=4.1e-13 Score=115.93 Aligned_cols=224 Identities=13% Similarity=-0.015 Sum_probs=129.6
Q ss_pred CHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHh----cCCHHHHHHHHHHHHhCCCCCCHHHHH
Q 015370 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMS----VGQVEKVALVVEEIKRKNVVPDIFTYN 231 (408)
Q Consensus 156 ~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~----~g~~~~a~~~~~~m~~~g~~p~~~~~~ 231 (408)
+..++..+...+...|++++|.+.|++..+.+ +..++..+...|.. .+++++|...|++..+.+ +...+.
T Consensus 5 ~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~---~~~a~~ 78 (273)
T 1ouv_A 5 DPKELVGLGAKSYKEKDFTQAKKYFEKACDLK---ENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN---YSNGCH 78 (273)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHH
T ss_pred ChHHHHHHHHHHHhCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC---CHHHHH
Confidence 44555555566666666666666666665533 44555556666666 666666666666665543 445555
Q ss_pred HHHHHHHh----cCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHH----cCchhhhHHHHHHHHHHhcccCccchHH
Q 015370 232 LWISSCAA----TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT----ASHLVNAESSTLVEAEKSITQRQWITYD 303 (408)
Q Consensus 232 ~ll~~~~~----~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~----~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 303 (408)
.+...|.. .+++++|...|++..+. + +...+..+...|.. .+++++|.. .+++..+.+ +...+.
T Consensus 79 ~lg~~~~~g~~~~~~~~~A~~~~~~a~~~-~---~~~a~~~lg~~~~~~~~~~~~~~~A~~-~~~~a~~~~---~~~a~~ 150 (273)
T 1ouv_A 79 LLGNLYYSGQGVSQNTNKALQYYSKACDL-K---YAEGCASLGGIYHDGKVVTRDFKKAVE-YFTKACDLN---DGDGCT 150 (273)
T ss_dssp HHHHHHHHTSSSCCCHHHHHHHHHHHHHT-T---CHHHHHHHHHHHHHCSSSCCCHHHHHH-HHHHHHHTT---CHHHHH
T ss_pred HHHHHHhCCCCcccCHHHHHHHHHHHHHc-C---CccHHHHHHHHHHcCCCcccCHHHHHH-HHHHHHhcC---cHHHHH
Confidence 55555655 66666666666666552 2 45555566666666 666666666 555555433 334455
Q ss_pred HHHHHHHh----cCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHh----cCCHHHHHHHHHHHHhhCCCCCCHHHHHH
Q 015370 304 FLIILYAG----LGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLM----LGHLKEVGEIIDQWKQSATSDFDISACNR 375 (408)
Q Consensus 304 ~li~~~~~----~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~----~g~~~~A~~~~~~~~~~~~~~~~~~~~~~ 375 (408)
.+...|.. .+++++|...|++..+.+ +...+..+...|.. .+++++|...|++..+.+ +...+..
T Consensus 151 ~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~----~~~a~~~ 223 (273)
T 1ouv_A 151 ILGSLYDAGRGTPKDLKKALASYDKACDLK---DSPGCFNAGNMYHHGEGATKNFKEALARYSKACELE----NGGGCFN 223 (273)
T ss_dssp HHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTT----CHHHHHH
T ss_pred HHHHHHHcCCCCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHhCC----CHHHHHH
Confidence 55555555 666666666666655443 33445555556666 666666666666665543 1444555
Q ss_pred HHHHHHh----cCChHHHHHHHHHHHhcC
Q 015370 376 LLGAFSD----VGLTEKANEFHMLLLQKN 400 (408)
Q Consensus 376 li~~~~~----~g~~~~a~~~~~~m~~~g 400 (408)
+...|.+ .+++++|.+.|++..+.|
T Consensus 224 l~~~~~~g~~~~~~~~~A~~~~~~a~~~~ 252 (273)
T 1ouv_A 224 LGAMQYNGEGVTRNEKQAIENFKKGCKLG 252 (273)
T ss_dssp HHHHHHTTSSSSCCSTTHHHHHHHHHHHT
T ss_pred HHHHHHcCCCcccCHHHHHHHHHHHHHcC
Confidence 6666666 666666666666665543
No 42
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.66 E-value=1.3e-13 Score=117.42 Aligned_cols=202 Identities=10% Similarity=-0.060 Sum_probs=154.4
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHH
Q 015370 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 236 (408)
Q Consensus 157 ~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~ 236 (408)
...|..+...+...|++++|.+.|+++.+.. +.+..++..+...|...|++++|.+.++++.+... .+...+..+...
T Consensus 37 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~-~~~~~~~~la~~ 114 (252)
T 2ho1_A 37 RDAYIQLGLGYLQRGNTEQAKVPLRKALEID-PSSADAHAALAVVFQTEMEPKLADEEYRKALASDS-RNARVLNNYGGF 114 (252)
T ss_dssp HHHHHHHHHHHHHTTCTGGGHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHhcC-CChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCc-CcHHHHHHHHHH
Confidence 5677888888888888888888888887764 44677888888888888888888888888877543 256777888888
Q ss_pred HHhcCCHHHHHHHHHHHhcCCCCCC-CHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCH
Q 015370 237 CAATLNIDQVKKFLDEMSCDSGGSD-DWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 315 (408)
Q Consensus 237 ~~~~g~~~~a~~~~~~~~~~~~~~~-~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~ 315 (408)
+...|++++|.++++++.+ .+..| +...+..+...|.+.|++++|.. .+.+.....+. +...+..+...+...|++
T Consensus 115 ~~~~g~~~~A~~~~~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~-~~~~~~~~~~~-~~~~~~~la~~~~~~g~~ 191 (252)
T 2ho1_A 115 LYEQKRYEEAYQRLLEASQ-DTLYPERSRVFENLGLVSLQMKKPAQAKE-YFEKSLRLNRN-QPSVALEMADLLYKEREY 191 (252)
T ss_dssp HHHTTCHHHHHHHHHHHTT-CTTCTTHHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHHCSC-CHHHHHHHHHHHHHTTCH
T ss_pred HHHHhHHHHHHHHHHHHHh-CccCcccHHHHHHHHHHHHHcCCHHHHHH-HHHHHHhcCcc-cHHHHHHHHHHHHHcCCH
Confidence 8888888888888888877 23333 55667778888888888888888 77777665433 566777788888888888
Q ss_pred HHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhhC
Q 015370 316 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364 (408)
Q Consensus 316 ~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~ 364 (408)
++|...+++..+... .+...+..+...+...|+.++|.++++++.+..
T Consensus 192 ~~A~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~~~ 239 (252)
T 2ho1_A 192 VPARQYYDLFAQGGG-QNARSLLLGIRLAKVFEDRDTAASYGLQLKRLY 239 (252)
T ss_dssp HHHHHHHHHHHTTSC-CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhCc-CcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHC
Confidence 888888887766532 345566777777888888888888888887754
No 43
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.64 E-value=3.2e-14 Score=120.33 Aligned_cols=202 Identities=13% Similarity=0.036 Sum_probs=122.9
Q ss_pred CHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHH
Q 015370 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235 (408)
Q Consensus 156 ~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~ 235 (408)
....|..+...+...|++++|...|+++.+.. +.+..++..+...+...|++++|...++++.+... .+..++..+..
T Consensus 22 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~la~ 99 (243)
T 2q7f_A 22 ASMTGGQQMGRGSEFGDYEKAAEAFTKAIEEN-KEDAIPYINFANLLSSVNELERALAFYDKALELDS-SAATAYYGAGN 99 (243)
T ss_dssp --------------------CCTTHHHHHTTC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCHHHHHHHHHHHHHhC-cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC-cchHHHHHHHH
Confidence 35556666667777777777777777776653 34566777777777777777777777777766432 25566666777
Q ss_pred HHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCH
Q 015370 236 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 315 (408)
Q Consensus 236 ~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~ 315 (408)
.+...|++++|.++++++.+. .+.+...+..+...+.+.|++++|.. .+.++.+..+. +...+..+...+...|++
T Consensus 100 ~~~~~~~~~~A~~~~~~~~~~--~~~~~~~~~~~a~~~~~~~~~~~A~~-~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~ 175 (243)
T 2q7f_A 100 VYVVKEMYKEAKDMFEKALRA--GMENGDLFYMLGTVLVKLEQPKLALP-YLQRAVELNEN-DTEARFQFGMCLANEGML 175 (243)
T ss_dssp HHHHTTCHHHHHHHHHHHHHH--TCCSHHHHHHHHHHHHHTSCHHHHHH-HHHHHHHHCTT-CHHHHHHHHHHHHHHTCC
T ss_pred HHHHhccHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHhccHHHHHH-HHHHHHHhCCc-cHHHHHHHHHHHHHcCCH
Confidence 777777777777777776662 24456666777777777777777777 66666554332 455666777777777777
Q ss_pred HHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhhC
Q 015370 316 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364 (408)
Q Consensus 316 ~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~ 364 (408)
++|...+++..+... .+...+..+...|...|++++|...+++..+..
T Consensus 176 ~~A~~~~~~~~~~~~-~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 223 (243)
T 2q7f_A 176 DEALSQFAAVTEQDP-GHADAFYNAGVTYAYKENREKALEMLDKAIDIQ 223 (243)
T ss_dssp HHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhCc-ccHHHHHHHHHHHHHccCHHHHHHHHHHHHccC
Confidence 777777777665532 245566677777777777777777777777653
No 44
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.64 E-value=1.1e-14 Score=125.81 Aligned_cols=245 Identities=9% Similarity=-0.020 Sum_probs=189.7
Q ss_pred hhcChHHHHHHHhcCCCCC-----CCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHH
Q 015370 136 KVFGIHSGERYFEGLPLSA-----KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 210 (408)
Q Consensus 136 ~~g~~~~a~~~~~~~~~~~-----~~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~ 210 (408)
..|++++|+..|+++.... .+..+|..+...+...|++++|...|+++.+.+ +.+..+|..+...|...|++++
T Consensus 17 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~la~~~~~~~~~~~ 95 (275)
T 1xnf_A 17 PTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIR-PDMPEVFNYLGIYLTQAGNFDA 95 (275)
T ss_dssp CCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHTTCHHH
T ss_pred ccchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcC-CCcHHHHHHHHHHHHHccCHHH
Confidence 4578899999998877642 247889999999999999999999999999875 4578899999999999999999
Q ss_pred HHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHH
Q 015370 211 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 290 (408)
Q Consensus 211 a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~ 290 (408)
|...|++..+.... +..++..+...+...|++++|...++++.+. .|+.......+..+...|++++|.. .+...
T Consensus 96 A~~~~~~al~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~---~~~~~~~~~~~~~~~~~~~~~~A~~-~~~~~ 170 (275)
T 1xnf_A 96 AYEAFDSVLELDPT-YNYAHLNRGIALYYGGRDKLAQDDLLAFYQD---DPNDPFRSLWLYLAEQKLDEKQAKE-VLKQH 170 (275)
T ss_dssp HHHHHHHHHHHCTT-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHHCHHHHHH-HHHHH
T ss_pred HHHHHHHHHhcCcc-ccHHHHHHHHHHHHhccHHHHHHHHHHHHHh---CCCChHHHHHHHHHHHhcCHHHHHH-HHHHH
Confidence 99999999986432 5788889999999999999999999999873 2343344445555677799999999 88777
Q ss_pred HHhcccCccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCC---ChhhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC
Q 015370 291 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM---TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSD 367 (408)
Q Consensus 291 ~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p---~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~ 367 (408)
....+. +...+ .++..+...++.++|.+.+.+........ +...+..+...|.+.|++++|...|++..+.. +
T Consensus 171 ~~~~~~-~~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~--p 246 (275)
T 1xnf_A 171 FEKSDK-EQWGW-NIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANN--V 246 (275)
T ss_dssp HHHSCC-CSTHH-HHHHHHTTSSCHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC--C
T ss_pred HhcCCc-chHHH-HHHHHHHHhcCHHHHHHHHHHHhcccccccccccHHHHHHHHHHHHcCCHHHHHHHHHHHHhCC--c
Confidence 665433 44444 46777788888999999998876543321 14677889999999999999999999998753 2
Q ss_pred CCHHHHHHHHHHHHhcCChHHHHHHH
Q 015370 368 FDISACNRLLGAFSDVGLTEKANEFH 393 (408)
Q Consensus 368 ~~~~~~~~li~~~~~~g~~~~a~~~~ 393 (408)
.+... ...++...|++++|++.+
T Consensus 247 ~~~~~---~~~~~~~l~~~~~a~~~~ 269 (275)
T 1xnf_A 247 HNFVE---HRYALLELSLLGQDQDDL 269 (275)
T ss_dssp TTCHH---HHHHHHHHHHHHHC----
T ss_pred hhHHH---HHHHHHHHHHHHhhHHHH
Confidence 23333 355677888888888766
No 45
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.64 E-value=2.7e-12 Score=121.85 Aligned_cols=322 Identities=9% Similarity=0.070 Sum_probs=226.7
Q ss_pred CCCCcHHHHHHHHHHcCCCCChhhHHHHHHHH-HhcccHHHHHH----HHHHHHhccCCCC-ChHHHHHHHHHHHh----
Q 015370 67 LPKRSATNVIQRWVSEGNQATVSELRHILKEL-RKSQRYKHALE----ISEWMVTHKEFVL-SDSDYATRIDLMTK---- 136 (408)
Q Consensus 67 ~~~~~a~~~l~~~~~~g~~~~~~~~~~li~~~-~~~~~~~~a~~----~~~~~~~~~~~~~-~~~~~~~li~~~~~---- 136 (408)
.+.+.|..++++.++.. |+...|...+... ...|+.+.|.+ +|+.....-+..| +...|...+....+
T Consensus 60 ~~~~~a~~~~~ral~~~--p~~~lw~~~~~~~~~~~~~~~~a~~~~~~~~~~al~~~g~~~~~~~~w~~~~~~~~~~~~~ 137 (530)
T 2ooe_A 60 KNYDKVEKLFQRCLMKV--LHIDLWKCYLSYVRETKGKLPSYKEKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAV 137 (530)
T ss_dssp TCHHHHHHHHHHHTTTC--CCHHHHHHHHHHHHHHTTTSTTHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHSCCC
T ss_pred CCHHHHHHHHHHHHhcC--CChHHHHHHHHHHHHHccchhhHHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHhcCCCc
Confidence 34566777787777653 6777777776533 34567766654 7777765422333 46778887776655
Q ss_pred -----hcChHHHHHHHhcCCCCCCC---HHHHHHHHHHH-------------HcCCCHH---------------------
Q 015370 137 -----VFGIHSGERYFEGLPLSAKT---SETYTALLHLY-------------AGAKWTE--------------------- 174 (408)
Q Consensus 137 -----~g~~~~a~~~~~~~~~~~~~---~~~~~~ll~~~-------------~~~~~~~--------------------- 174 (408)
.|+++.|..+|++.... |+ ...|....... .+.++++
T Consensus 138 ~~~~~~~~~~~a~~~y~~al~~-P~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~~~~~A~~~~~~~~~~~~~l~~~~~ 216 (530)
T 2ooe_A 138 GSYAENQRITAVRRVYQRGCVN-PMINIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAP 216 (530)
T ss_dssp SSTTHHHHHHHHHHHHHHHTTS-CCTTHHHHHHHHHHHHHHHCHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHCCSSSC
T ss_pred ccHHHHhHHHHHHHHHHHHHhc-hhhhHHHHHHHHHHHHHhhchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccccc
Confidence 78999999999997764 32 23333221100 0111222
Q ss_pred ---------------------------------------HHHHHHHHHHhCCCCCChhhHHHHHHHHHh-------cCCH
Q 015370 175 ---------------------------------------KAEELFERVKQSNLSFNALMYNEMMTLYMS-------VGQV 208 (408)
Q Consensus 175 ---------------------------------------~A~~~~~~m~~~~~~p~~~~~~~li~~~~~-------~g~~ 208 (408)
+|..+|++..... +-+...|..+...+.+ .|++
T Consensus 217 ~~~p~~~~~~~~~~~~w~~~~~~e~~~~~~~~~~~~~~~~a~~~y~~al~~~-p~~~~~w~~~~~~~~~~~~~~~~~g~~ 295 (530)
T 2ooe_A 217 SVPPQNTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVL-GHHPDIWYEAAQYLEQSSKLLAEKGDM 295 (530)
T ss_dssp CCCCC--CCHHHHHHHHHHHHHHHHHCSSCCSCSHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred cCCCCCChhHHHHHHHHHHHHHHHHcCCccCCcchhHHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHhchhhhhccch
Confidence 3344555544432 3356677777777765 6887
Q ss_pred H-------HHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCC-CH-HHHHHHHHHHHHcCch
Q 015370 209 E-------KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD-DW-VKYVNLVNIYITASHL 279 (408)
Q Consensus 209 ~-------~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~-~~-~~~~~li~~~~~~~~~ 279 (408)
+ +|..+|++..+.-.+-+...|..++..+.+.|++++|..+|+++.+. .| +. ..|..++..+.+.|+.
T Consensus 296 ~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~---~p~~~~~~~~~~~~~~~~~~~~ 372 (530)
T 2ooe_A 296 NNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAI---EDIDPTLVYIQYMKFARRAEGI 372 (530)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHS---SSSCHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHhCc---cccCchHHHHHHHHHHHHhcCH
Confidence 6 89999999986322335788889999999999999999999999983 34 33 5799999999999999
Q ss_pred hhhHHHHHHHHHHhcccCccchHHHHHHH-HHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHH
Q 015370 280 VNAESSTLVEAEKSITQRQWITYDFLIIL-YAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 358 (408)
Q Consensus 280 ~~a~~~~~~~~~~~~~~~~~~~~~~li~~-~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~ 358 (408)
++|.. ++.+..+..+. +...|...... +...|+.++|..+|++..+... -+...|..++..+.+.|+.++|..+|+
T Consensus 373 ~~A~~-~~~~Al~~~~~-~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p-~~~~~~~~~~~~~~~~g~~~~Ar~~~~ 449 (530)
T 2ooe_A 373 KSGRM-IFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYG-DIPEYVLAYIDYLSHLNEDNNTRVLFE 449 (530)
T ss_dssp HHHHH-HHHHHHTCTTC-CTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHTTTTCHHHHHHHHH
T ss_pred HHHHH-HHHHHHhccCC-chHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCC-CCHHHHHHHHHHHHhCCCHhhHHHHHH
Confidence 99999 88888765332 23333222222 3468999999999998877642 256778889999999999999999999
Q ss_pred HHHhhCCCCCC--HHHHHHHHHHHHhcCChHHHHHHHHHHHh
Q 015370 359 QWKQSATSDFD--ISACNRLLGAFSDVGLTEKANEFHMLLLQ 398 (408)
Q Consensus 359 ~~~~~~~~~~~--~~~~~~li~~~~~~g~~~~a~~~~~~m~~ 398 (408)
+....+...|+ ...|...+......|+.+.+..+++++.+
T Consensus 450 ~al~~~~~~~~~~~~lw~~~~~~e~~~G~~~~~~~~~~r~~~ 491 (530)
T 2ooe_A 450 RVLTSGSLPPEKSGEIWARFLAFESNIGDLASILKVEKRRFT 491 (530)
T ss_dssp HHHHSCCSCGGGCHHHHHHHHHHHHHSSCHHHHHHHHHHHHH
T ss_pred HHHhccCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 99886533333 45888888888899999999999999876
No 46
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.64 E-value=9.4e-14 Score=115.84 Aligned_cols=199 Identities=12% Similarity=-0.003 Sum_probs=104.2
Q ss_pred HHHHHHHHHHhhcChHHHHHHHhcCCCCC-CCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHh
Q 015370 126 DYATRIDLMTKVFGIHSGERYFEGLPLSA-KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMS 204 (408)
Q Consensus 126 ~~~~li~~~~~~g~~~~a~~~~~~~~~~~-~~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~ 204 (408)
.+..+...+...|++++|.+.|++..... .+...|..+...+...|++++|.+.++++.... +.+..++..+...+..
T Consensus 10 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~l~~~~~~ 88 (225)
T 2vq2_A 10 IKTQLAMEYMRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIK-PDSAEINNNYGWFLCG 88 (225)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhC-CCChHHHHHHHHHHHH
Confidence 34444444444444444444444433221 234455555555555555555555555555432 2344555555555555
Q ss_pred c-CCHHHHHHHHHHHHhCCCCCC-HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhh
Q 015370 205 V-GQVEKVALVVEEIKRKNVVPD-IFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 282 (408)
Q Consensus 205 ~-g~~~~a~~~~~~m~~~g~~p~-~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a 282 (408)
. |++++|...++++.+.+..|+ ...+..+..++...|++++|...++++.+. .+.+...+..+...+.+.|++++|
T Consensus 89 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~--~~~~~~~~~~la~~~~~~~~~~~A 166 (225)
T 2vq2_A 89 RLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAA--QPQFPPAFKELARTKMLAGQLGDA 166 (225)
T ss_dssp TTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--STTCHHHHHHHHHHHHHHTCHHHH
T ss_pred hcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCCchHHHHHHHHHHHcCCHHHH
Confidence 5 556666655555555222222 344555555556666666666666655542 233455556666666666666666
Q ss_pred HHHHHHHHHHhcccCccchHHHHHHHHHhcCCHHHHHHHHHHHHhc
Q 015370 283 ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 328 (408)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~ 328 (408)
.. .+.......+..+...+..+...+...|+.+++..+++.+.+.
T Consensus 167 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 211 (225)
T 2vq2_A 167 DY-YFKKYQSRVEVLQADDLLLGWKIAKALGNAQAAYEYEAQLQAN 211 (225)
T ss_dssp HH-HHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HH-HHHHHHHhCCCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHh
Confidence 66 5555555443234445555555566666666666666665543
No 47
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.64 E-value=9.8e-14 Score=118.18 Aligned_cols=200 Identities=8% Similarity=-0.042 Sum_probs=133.3
Q ss_pred hhhHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHHHHhcCCCCC-CCHHHHHHHHHH
Q 015370 88 VSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA-KTSETYTALLHL 166 (408)
Q Consensus 88 ~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~-~~~~~~~~ll~~ 166 (408)
...+..+...+...|++++|++.|+++.+.. +.+...+..+...+...|++++|.+.|+++.... .+...+..+...
T Consensus 37 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~--~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~ 114 (252)
T 2ho1_A 37 RDAYIQLGLGYLQRGNTEQAKVPLRKALEID--PSSADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGF 114 (252)
T ss_dssp HHHHHHHHHHHHHTTCTGGGHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHhcC--CChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHH
Confidence 4566777777888888888888888877753 4456677777777777777777777777655442 356677777777
Q ss_pred HHcCCCHHHHHHHHHHHHhCCCCC-ChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHH
Q 015370 167 YAGAKWTEKAEELFERVKQSNLSF-NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 245 (408)
Q Consensus 167 ~~~~~~~~~A~~~~~~m~~~~~~p-~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~ 245 (408)
+...|++++|.+.|+++...+..| +...+..+...+...|++++|...+++..+... .+...+..+...+...|++++
T Consensus 115 ~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~-~~~~~~~~la~~~~~~g~~~~ 193 (252)
T 2ho1_A 115 LYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNR-NQPSVALEMADLLYKEREYVP 193 (252)
T ss_dssp HHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCS-CCHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCc-ccHHHHHHHHHHHHHcCCHHH
Confidence 777777777777777776622223 455666677777777777777777777665432 245666666667777777777
Q ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHh
Q 015370 246 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 293 (408)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~ 293 (408)
|...++++.+. .+.+...+..+...+.+.|+.++|.+ .++.+.+.
T Consensus 194 A~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~A~~-~~~~~~~~ 238 (252)
T 2ho1_A 194 ARQYYDLFAQG--GGQNARSLLLGIRLAKVFEDRDTAAS-YGLQLKRL 238 (252)
T ss_dssp HHHHHHHHHTT--SCCCHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHH
T ss_pred HHHHHHHHHHh--CcCcHHHHHHHHHHHHHccCHHHHHH-HHHHHHHH
Confidence 77777776652 33455556666666666666666666 56655544
No 48
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.63 E-value=9.4e-13 Score=122.99 Aligned_cols=304 Identities=10% Similarity=-0.058 Sum_probs=218.4
Q ss_pred CCChhhHHHHHHHHHhcccHHHHHHHHHHHHhc----c--CCCC-ChHHHHHHHHHHHhhcChHHHHHHHhcCCCC----
Q 015370 85 QATVSELRHILKELRKSQRYKHALEISEWMVTH----K--EFVL-SDSDYATRIDLMTKVFGIHSGERYFEGLPLS---- 153 (408)
Q Consensus 85 ~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~----~--~~~~-~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~---- 153 (408)
......|+.+...+...|++++|++.|++..+. . ...| ...+|+.+..+|...|++++|...+++....
T Consensus 48 ~~~a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~ 127 (472)
T 4g1t_A 48 EFKATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKF 127 (472)
T ss_dssp --CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS
T ss_pred hhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhc
Confidence 344667999999999999999999999987542 1 0123 3568999999999999999999888764321
Q ss_pred ----C-CCHHHHHHHHHHHHc--CCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHH---HhcCCHHHHHHHHHHHHhCCC
Q 015370 154 ----A-KTSETYTALLHLYAG--AKWTEKAEELFERVKQSNLSFNALMYNEMMTLY---MSVGQVEKVALVVEEIKRKNV 223 (408)
Q Consensus 154 ----~-~~~~~~~~ll~~~~~--~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~---~~~g~~~~a~~~~~~m~~~g~ 223 (408)
. ....++..+..++.+ .+++++|+..|++..+.. |-++..+..+..++ ...++.++|++.+++..+...
T Consensus 128 ~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~-p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p 206 (472)
T 4g1t_A 128 SSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKK-PKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNP 206 (472)
T ss_dssp CCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCS
T ss_pred ccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCC
Confidence 1 235677776666654 457999999999998865 33555666555553 456788899999998887543
Q ss_pred CCCHHHHHHHHHHHHh----cCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCcc
Q 015370 224 VPDIFTYNLWISSCAA----TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 299 (408)
Q Consensus 224 ~p~~~~~~~ll~~~~~----~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 299 (408)
. +..++..+...+.. .|++++|.+++++.... .+.+..++..+...|.+.|++++|.. .+.+..+..+. +.
T Consensus 207 ~-~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~al~~--~~~~~~~~~~lg~~~~~~~~~~~A~~-~~~~al~~~p~-~~ 281 (472)
T 4g1t_A 207 D-NQYLKVLLALKLHKMREEGEEEGEGEKLVEEALEK--APGVTDVLRSAAKFYRRKDEPDKAIE-LLKKALEYIPN-NA 281 (472)
T ss_dssp S-CHHHHHHHHHHHHHCC------CHHHHHHHHHHHH--CSSCHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHHSTT-CH
T ss_pred c-chHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHh--CccHHHHHHHHHHHHHHcCchHHHHH-HHHHHHHhCCC-hH
Confidence 2 45566655555544 46788999999998773 45677889999999999999999999 88888776544 55
Q ss_pred chHHHHHHHHHhc-------------------CCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHH
Q 015370 300 ITYDFLIILYAGL-------------------GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW 360 (408)
Q Consensus 300 ~~~~~li~~~~~~-------------------~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~ 360 (408)
.++..+...|... +..+.|...+++..+... .+...+..+...|...|++++|+..|++.
T Consensus 282 ~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~-~~~~~~~~lg~~~~~~~~~~~A~~~~~ka 360 (472)
T 4g1t_A 282 YLHCQIGCCYRAKVFQVMNLRENGMYGKRKLLELIGHAVAHLKKADEAND-NLFRVCSILASLHALADQYEEAEYYFQKE 360 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHHHHHHCT-TTCCCHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhcCC-chhhhhhhHHHHHHHhccHHHHHHHHHHH
Confidence 6666666555322 335677778877766542 25667888999999999999999999999
Q ss_pred HhhCCCCCCHH----HHHHHHH-HHHhcCChHHHHHHHHHHHh
Q 015370 361 KQSATSDFDIS----ACNRLLG-AFSDVGLTEKANEFHMLLLQ 398 (408)
Q Consensus 361 ~~~~~~~~~~~----~~~~li~-~~~~~g~~~~a~~~~~~m~~ 398 (408)
.+.. |+.. .+..+.. .....|++++|+..|++.++
T Consensus 361 L~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal~ 400 (472)
T 4g1t_A 361 FSKE---LTPVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGVK 400 (472)
T ss_dssp HHSC---CCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HhcC---CCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 8753 2322 2233332 34568999999999999887
No 49
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.62 E-value=1.6e-14 Score=122.21 Aligned_cols=201 Identities=11% Similarity=0.058 Sum_probs=101.5
Q ss_pred CChhhHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHHHHhcCCCCC-CCHHHHHHHH
Q 015370 86 ATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA-KTSETYTALL 164 (408)
Q Consensus 86 ~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~-~~~~~~~~ll 164 (408)
.....|..+...+...|++++|+..|+++.+.. +.+...+..+...+...|++++|...|++..... .+..++..+.
T Consensus 21 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~--~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la 98 (243)
T 2q7f_A 21 MASMTGGQQMGRGSEFGDYEKAAEAFTKAIEEN--KEDAIPYINFANLLSSVNELERALAFYDKALELDSSAATAYYGAG 98 (243)
T ss_dssp ---------------------CCTTHHHHHTTC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHhC--cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHH
Confidence 445556666666667777777777777766643 3445566666666666666666666666544332 3455566666
Q ss_pred HHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHH
Q 015370 165 HLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244 (408)
Q Consensus 165 ~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~ 244 (408)
..+...|++++|.+.++++.+.. +.+...+..+...+.+.|++++|...++++.+... .+...+..+...+...|+++
T Consensus 99 ~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~ 176 (243)
T 2q7f_A 99 NVYVVKEMYKEAKDMFEKALRAG-MENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNE-NDTEARFQFGMCLANEGMLD 176 (243)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHT-CCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHHTCCH
T ss_pred HHHHHhccHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-ccHHHHHHHHHHHHHcCCHH
Confidence 66666666666666666655543 33455555666666666666666666666554322 24445555555555566666
Q ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHh
Q 015370 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 293 (408)
Q Consensus 245 ~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~ 293 (408)
+|...++++.+. .+.+..++..+...|.+.|++++|.. .++.+.+.
T Consensus 177 ~A~~~~~~~~~~--~~~~~~~~~~la~~~~~~~~~~~A~~-~~~~~~~~ 222 (243)
T 2q7f_A 177 EALSQFAAVTEQ--DPGHADAFYNAGVTYAYKENREKALE-MLDKAIDI 222 (243)
T ss_dssp HHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCTTHHHH-HHHHHHHH
T ss_pred HHHHHHHHHHHh--CcccHHHHHHHHHHHHHccCHHHHHH-HHHHHHcc
Confidence 666666555542 23344455555555555555555555 55544443
No 50
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.62 E-value=1.7e-13 Score=123.58 Aligned_cols=233 Identities=11% Similarity=0.045 Sum_probs=188.1
Q ss_pred CHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCC-HHHHHHHHHHHHhCCCCCCHHHHHHHH
Q 015370 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ-VEKVALVVEEIKRKNVVPDIFTYNLWI 234 (408)
Q Consensus 156 ~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~-~~~a~~~~~~m~~~g~~p~~~~~~~ll 234 (408)
+...|+.+...+.+.|++++|++.|++.+... +-+..+|+.+..++...|+ +++|+..|++....... +...|..+.
T Consensus 96 ~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~-P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~-~~~a~~~~g 173 (382)
T 2h6f_A 96 FRDVYDYFRAVLQRDERSERAFKLTRDAIELN-AANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPK-NYQVWHHRR 173 (382)
T ss_dssp HHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT-CHHHHHHHH
T ss_pred hHHHHHHHHHHHHHCCChHHHHHHHHHHHHhC-ccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCC-CHHHHHHHH
Confidence 36778888888999999999999999988875 4467889999999999996 99999999999886543 678888888
Q ss_pred HHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHh-cC
Q 015370 235 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAG-LG 313 (408)
Q Consensus 235 ~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~-~~ 313 (408)
.++...|++++|+..|+++.+. .+.+...|..+..++.+.|++++|+. .+.++.+..+. +...|+.+...+.. .|
T Consensus 174 ~~~~~~g~~~eAl~~~~kal~l--dP~~~~a~~~lg~~~~~~g~~~eAl~-~~~~al~l~P~-~~~a~~~lg~~l~~l~~ 249 (382)
T 2h6f_A 174 VLVEWLRDPSQELEFIADILNQ--DAKNYHAWQHRQWVIQEFKLWDNELQ-YVDQLLKEDVR-NNSVWNQRYFVISNTTG 249 (382)
T ss_dssp HHHHHHTCCTTHHHHHHHHHHH--CTTCHHHHHHHHHHHHHHTCCTTHHH-HHHHHHHHCTT-CHHHHHHHHHHHHHTTC
T ss_pred HHHHHccCHHHHHHHHHHHHHh--CccCHHHHHHHHHHHHHcCChHHHHH-HHHHHHHhCCC-CHHHHHHHHHHHHHhcC
Confidence 8999999999999999998873 45678889999999999999999999 88888776554 77888889888888 56
Q ss_pred CHHHH-----HHHHHHHHhccCCCChhhHHHHHHHHHhcC--CHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHhcC--
Q 015370 314 NKDKI-----DQIWKSLRMTKQKMTSRNYICILSSYLMLG--HLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG-- 384 (408)
Q Consensus 314 ~~~~a-----~~~~~~m~~~~~~p~~~~~~~li~~~~~~g--~~~~A~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g-- 384 (408)
..++| ++.+++....... +...|..+...+.+.| ++++|.+.+.++ +. .+.+...+..+..+|.+.|
T Consensus 250 ~~~eA~~~~el~~~~~Al~l~P~-~~~a~~~l~~ll~~~g~~~~~~a~~~~~~~-~~--~p~~~~al~~La~~~~~~~~~ 325 (382)
T 2h6f_A 250 YNDRAVLEREVQYTLEMIKLVPH-NESAWNYLKGILQDRGLSKYPNLLNQLLDL-QP--SHSSPYLIAFLVDIYEDMLEN 325 (382)
T ss_dssp SCSHHHHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHTTTCGGGCHHHHHHHHHH-TT--TCCCHHHHHHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHccCccchHHHHHHHHHh-cc--CCCCHHHHHHHHHHHHHHhcc
Confidence 65777 4778877765322 4556777788888877 688999999887 32 3456778888888888874
Q ss_pred -------ChHHHHHHHHHH-Hh
Q 015370 385 -------LTEKANEFHMLL-LQ 398 (408)
Q Consensus 385 -------~~~~a~~~~~~m-~~ 398 (408)
..++|.++++++ .+
T Consensus 326 ~~~~~~~~~~~A~~~~~~l~~~ 347 (382)
T 2h6f_A 326 QCDNKEDILNKALELCEILAKE 347 (382)
T ss_dssp TCSSHHHHHHHHHHHHHHHHHT
T ss_pred cccchHHHHHHHHHHHHHHHHH
Confidence 258899999998 55
No 51
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.62 E-value=1e-12 Score=113.37 Aligned_cols=222 Identities=12% Similarity=-0.038 Sum_probs=118.0
Q ss_pred HHHHHHHHHHHhhcChHHHHHHHhcCCCCCCCHHHHHHHHHHHHc----CCCHHHHHHHHHHHHhCCCCCChhhHHHHHH
Q 015370 125 SDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAG----AKWTEKAEELFERVKQSNLSFNALMYNEMMT 200 (408)
Q Consensus 125 ~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~ll~~~~~----~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~ 200 (408)
..+..+...+...|++++|.+.|++... ..+...+..+...|.. .+++++|.+.|++..+.+ +..++..+..
T Consensus 7 ~a~~~lg~~~~~~~~~~~A~~~~~~a~~-~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~ 82 (273)
T 1ouv_A 7 KELVGLGAKSYKEKDFTQAKKYFEKACD-LKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN---YSNGCHLLGN 82 (273)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHH-CCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC---CHHHHHHHHH
Confidence 3344444444444444444444444333 2233444445555555 555555555555555544 4455555555
Q ss_pred HHHh----cCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHh----cCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHH
Q 015370 201 LYMS----VGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA----TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 272 (408)
Q Consensus 201 ~~~~----~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~----~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~ 272 (408)
.|.. .+++++|...|++..+.+ +..++..+...|.. .+++++|...|++..+. + +...+..+...
T Consensus 83 ~~~~g~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~-~---~~~a~~~lg~~ 155 (273)
T 1ouv_A 83 LYYSGQGVSQNTNKALQYYSKACDLK---YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDL-N---DGDGCTILGSL 155 (273)
T ss_dssp HHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT-T---CHHHHHHHHHH
T ss_pred HHhCCCCcccCHHHHHHHHHHHHHcC---CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhc-C---cHHHHHHHHHH
Confidence 5555 555555555555555543 44455555555555 55555565555555552 2 34445555555
Q ss_pred HHH----cCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHh----cCCHHHHHHHHHHHHhccCCCChhhHHHHHHHH
Q 015370 273 YIT----ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAG----LGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY 344 (408)
Q Consensus 273 ~~~----~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~----~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~ 344 (408)
|.. .+++++|.. .+++..+.+ +...+..+...|.. .+++++|.+.|++..+.+ +...+..+...|
T Consensus 156 ~~~~~~~~~~~~~A~~-~~~~a~~~~---~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~---~~~a~~~l~~~~ 228 (273)
T 1ouv_A 156 YDAGRGTPKDLKKALA-SYDKACDLK---DSPGCFNAGNMYHHGEGATKNFKEALARYSKACELE---NGGGCFNLGAMQ 228 (273)
T ss_dssp HHHTSSSCCCHHHHHH-HHHHHHHTT---CHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHH
T ss_pred HHcCCCCCCCHHHHHH-HHHHHHHCC---CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHhCC---CHHHHHHHHHHH
Confidence 555 556666665 555544432 23445555555555 666666666666555543 134455555566
Q ss_pred Hh----cCCHHHHHHHHHHHHhhC
Q 015370 345 LM----LGHLKEVGEIIDQWKQSA 364 (408)
Q Consensus 345 ~~----~g~~~~A~~~~~~~~~~~ 364 (408)
.. .+++++|...|++..+.+
T Consensus 229 ~~g~~~~~~~~~A~~~~~~a~~~~ 252 (273)
T 1ouv_A 229 YNGEGVTRNEKQAIENFKKGCKLG 252 (273)
T ss_dssp HTTSSSSCCSTTHHHHHHHHHHHT
T ss_pred HcCCCcccCHHHHHHHHHHHHHcC
Confidence 65 666666666666666654
No 52
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.62 E-value=8e-14 Score=125.68 Aligned_cols=246 Identities=7% Similarity=-0.012 Sum_probs=146.1
Q ss_pred HHHHHHHHHHHhhcChHHHHHHHhcCCCCC-CCHHHHHHHHHHHHcCCC-HHHHHHHHHHHHhCCCCCChhhHHHHHHHH
Q 015370 125 SDYATRIDLMTKVFGIHSGERYFEGLPLSA-KTSETYTALLHLYAGAKW-TEKAEELFERVKQSNLSFNALMYNEMMTLY 202 (408)
Q Consensus 125 ~~~~~li~~~~~~g~~~~a~~~~~~~~~~~-~~~~~~~~ll~~~~~~~~-~~~A~~~~~~m~~~~~~p~~~~~~~li~~~ 202 (408)
..|..+..++.+.|++++|+..|++..... .+..+|+.+..++.+.|+ +++|+..|++.+..+ +-+..+|+.+..++
T Consensus 98 ~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~-P~~~~a~~~~g~~~ 176 (382)
T 2h6f_A 98 DVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQ-PKNYQVWHHRRVLV 176 (382)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCChHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHC-CCCHHHHHHHHHHH
Confidence 344555555555566666666665554432 245566666666666664 666666666666654 33556666666666
Q ss_pred HhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHH-cCchhh
Q 015370 203 MSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT-ASHLVN 281 (408)
Q Consensus 203 ~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~-~~~~~~ 281 (408)
...|++++|+..|+++.+.... +...|..+..++.+.|++++|+..++++.+. .+.+...|+.+..++.+ .|..++
T Consensus 177 ~~~g~~~eAl~~~~kal~ldP~-~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l--~P~~~~a~~~lg~~l~~l~~~~~e 253 (382)
T 2h6f_A 177 EWLRDPSQELEFIADILNQDAK-NYHAWQHRQWVIQEFKLWDNELQYVDQLLKE--DVRNNSVWNQRYFVISNTTGYNDR 253 (382)
T ss_dssp HHHTCCTTHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCSCSH
T ss_pred HHccCHHHHHHHHHHHHHhCcc-CHHHHHHHHHHHHHcCChHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHhcCcchH
Confidence 6666666666666666664332 4566666666666666777777766666652 34455666666666666 444455
Q ss_pred h-----HHHHHHHHHHhcccCccchHHHHHHHHHhcC--CHHHHHHHHHHHHhccCCC-ChhhHHHHHHHHHhcC-----
Q 015370 282 A-----ESSTLVEAEKSITQRQWITYDFLIILYAGLG--NKDKIDQIWKSLRMTKQKM-TSRNYICILSSYLMLG----- 348 (408)
Q Consensus 282 a-----~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~--~~~~a~~~~~~m~~~~~~p-~~~~~~~li~~~~~~g----- 348 (408)
| +. .+.+.....+. +...|+.+...+...| ++++|.+.+.++ +. .| +...+..+...|.+.|
T Consensus 254 A~~~~el~-~~~~Al~l~P~-~~~a~~~l~~ll~~~g~~~~~~a~~~~~~~-~~--~p~~~~al~~La~~~~~~~~~~~~ 328 (382)
T 2h6f_A 254 AVLEREVQ-YTLEMIKLVPH-NESAWNYLKGILQDRGLSKYPNLLNQLLDL-QP--SHSSPYLIAFLVDIYEDMLENQCD 328 (382)
T ss_dssp HHHHHHHH-HHHHHHHHSTT-CHHHHHHHHHHHTTTCGGGCHHHHHHHHHH-TT--TCCCHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHH-HHHHHHHHCCC-CHHHHHHHHHHHHccCccchHHHHHHHHHh-cc--CCCCHHHHHHHHHHHHHHhccccc
Confidence 5 24 45555444332 5566777777777666 567777777666 22 33 3455666777777653
Q ss_pred ----CHHHHHHHHHHH-HhhCCCCCCHHHHHHHHHHHH
Q 015370 349 ----HLKEVGEIIDQW-KQSATSDFDISACNRLLGAFS 381 (408)
Q Consensus 349 ----~~~~A~~~~~~~-~~~~~~~~~~~~~~~li~~~~ 381 (408)
..++|..+++++ ++.. +.....|..+...+.
T Consensus 329 ~~~~~~~~A~~~~~~l~~~~D--P~r~~~w~~~~~~l~ 364 (382)
T 2h6f_A 329 NKEDILNKALELCEILAKEKD--TIRKEYWRYIGRSLQ 364 (382)
T ss_dssp SHHHHHHHHHHHHHHHHHTTC--GGGHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHhC--chhHHHHHHHHHHHH
Confidence 247788888887 5532 223455655555444
No 53
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.61 E-value=6.6e-14 Score=127.89 Aligned_cols=299 Identities=14% Similarity=0.002 Sum_probs=225.3
Q ss_pred CCChhhHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCC----hHHHHHHHHHHHhhcChHHHHHHHhcCCCC-------
Q 015370 85 QATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLS----DSDYATRIDLMTKVFGIHSGERYFEGLPLS------- 153 (408)
Q Consensus 85 ~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~----~~~~~~li~~~~~~g~~~~a~~~~~~~~~~------- 153 (408)
......+......+...|++++|+..|++..+.. +.+ ...+..+...+...|++++|...|++....
T Consensus 6 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~--~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 83 (406)
T 3sf4_A 6 EASCLELALEGERLCKSGDCRAGVSFFEAAVQVG--TEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQ 83 (406)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--CSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhcC--cccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcccc
Confidence 3456667788889999999999999999999864 233 357888889999999999999988865332
Q ss_pred CCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCC-----CCCChhhHHHHHHHHHhcCC--------------------H
Q 015370 154 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSN-----LSFNALMYNEMMTLYMSVGQ--------------------V 208 (408)
Q Consensus 154 ~~~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~-----~~p~~~~~~~li~~~~~~g~--------------------~ 208 (408)
.....++..+...+...|++++|...+++..+.. ......++..+...|...|+ +
T Consensus 84 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~ 163 (406)
T 3sf4_A 84 LGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDAL 163 (406)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHH
Confidence 1236688899999999999999999999876531 01114488899999999999 9
Q ss_pred HHHHHHHHHHHhC----CCCCC-HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCC----HHHHHHHHHHHHHcCch
Q 015370 209 EKVALVVEEIKRK----NVVPD-IFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD----WVKYVNLVNIYITASHL 279 (408)
Q Consensus 209 ~~a~~~~~~m~~~----g~~p~-~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~----~~~~~~li~~~~~~~~~ 279 (408)
++|...+++.... +..|. ..++..+...+...|++++|...+++..+...-.++ ..++..+...|...|++
T Consensus 164 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 243 (406)
T 3sf4_A 164 QAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEF 243 (406)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCh
Confidence 9999999876532 21222 356788888999999999999999987652111122 23688899999999999
Q ss_pred hhhHHHHHHHHHHhcccC-----ccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCC-C----hhhHHHHHHHHHhcCC
Q 015370 280 VNAESSTLVEAEKSITQR-----QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM-T----SRNYICILSSYLMLGH 349 (408)
Q Consensus 280 ~~a~~~~~~~~~~~~~~~-----~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p-~----~~~~~~li~~~~~~g~ 349 (408)
++|.. .+.+........ ...++..+...|...|++++|.+.+++..+..... + ...+..+...|...|+
T Consensus 244 ~~A~~-~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~ 322 (406)
T 3sf4_A 244 ETASE-YYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGN 322 (406)
T ss_dssp HHHHH-HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHH-HHHHHHHHHHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCC
Confidence 99999 888776543321 14577888999999999999999999876542211 1 4467778889999999
Q ss_pred HHHHHHHHHHHHhhC----CCCCCHHHHHHHHHHHHhcCCh
Q 015370 350 LKEVGEIIDQWKQSA----TSDFDISACNRLLGAFSDVGLT 386 (408)
Q Consensus 350 ~~~A~~~~~~~~~~~----~~~~~~~~~~~li~~~~~~g~~ 386 (408)
+++|...+++..+.. .......++..+...+...|+.
T Consensus 323 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 363 (406)
T 3sf4_A 323 HDQAMHFAEKHLEISREVGDKSGELTARLNLSDLQMVLGLS 363 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHHHHHhhHh
Confidence 999999999876531 1111245677788888877765
No 54
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.61 E-value=6.2e-14 Score=128.06 Aligned_cols=277 Identities=15% Similarity=0.072 Sum_probs=212.5
Q ss_pred CCChHHHHHHHHHHHhhcChHHHHHHHhcCCCCCCC-----HHHHHHHHHHHHcCCCHHHHHHHHHHHHhC----CCCC-
Q 015370 121 VLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKT-----SETYTALLHLYAGAKWTEKAEELFERVKQS----NLSF- 190 (408)
Q Consensus 121 ~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~-----~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~----~~~p- 190 (408)
......+......+...|++++|...|++.....|+ ..+|..+...+...|++++|...+++.... +-.|
T Consensus 6 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 85 (406)
T 3sf4_A 6 EASCLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLG 85 (406)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHH
Confidence 445667777888999999999999999987655443 467889999999999999999999986543 2122
Q ss_pred ChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCC----CCC-CHHHHHHHHHHHHhcCC--------------------HHH
Q 015370 191 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKN----VVP-DIFTYNLWISSCAATLN--------------------IDQ 245 (408)
Q Consensus 191 ~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g----~~p-~~~~~~~ll~~~~~~g~--------------------~~~ 245 (408)
...++..+...|...|++++|...+++..... -.+ ...++..+...+...|+ +++
T Consensus 86 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~ 165 (406)
T 3sf4_A 86 EAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQA 165 (406)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHH
Confidence 25578889999999999999999998876531 111 14478888889999999 999
Q ss_pred HHHHHHHHhcC---CCC-CCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccC-c----cchHHHHHHHHHhcCCHH
Q 015370 246 VKKFLDEMSCD---SGG-SDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR-Q----WITYDFLIILYAGLGNKD 316 (408)
Q Consensus 246 a~~~~~~~~~~---~~~-~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~-~----~~~~~~li~~~~~~~~~~ 316 (408)
|...+++..+. .+. +....++..+...|...|++++|.. .+.+........ + ..++..+...|...|+++
T Consensus 166 A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~-~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 244 (406)
T 3sf4_A 166 AVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVI-AHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFE 244 (406)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTBHHHHHH-HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHccCHHHHHH-HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChH
Confidence 99998876541 111 1223468889999999999999999 888776643321 1 247888999999999999
Q ss_pred HHHHHHHHHHhccCC-CC----hhhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCC----HHHHHHHHHHHHhcCChH
Q 015370 317 KIDQIWKSLRMTKQK-MT----SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD----ISACNRLLGAFSDVGLTE 387 (408)
Q Consensus 317 ~a~~~~~~m~~~~~~-p~----~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~~----~~~~~~li~~~~~~g~~~ 387 (408)
+|...+++....... ++ ..++..+...|...|++++|...+++..+.....++ ..++..+...|...|+++
T Consensus 245 ~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 324 (406)
T 3sf4_A 245 TASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHD 324 (406)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHH
Confidence 999999987654221 11 446778889999999999999999998764211222 567888999999999999
Q ss_pred HHHHHHHHHHh
Q 015370 388 KANEFHMLLLQ 398 (408)
Q Consensus 388 ~a~~~~~~m~~ 398 (408)
+|.+.+++..+
T Consensus 325 ~A~~~~~~al~ 335 (406)
T 3sf4_A 325 QAMHFAEKHLE 335 (406)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998765
No 55
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.60 E-value=2e-14 Score=131.82 Aligned_cols=167 Identities=8% Similarity=-0.083 Sum_probs=100.9
Q ss_pred ChhhHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCCh----HHHHHHHHHHHhhcChHHHHHHHhcCCCC-------CC
Q 015370 87 TVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSD----SDYATRIDLMTKVFGIHSGERYFEGLPLS-------AK 155 (408)
Q Consensus 87 ~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~----~~~~~li~~~~~~g~~~~a~~~~~~~~~~-------~~ 155 (408)
....+..+...+...|++++|++.|++..+.. +.+. ..+..+...+...|++++|...|++.... ..
T Consensus 47 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~--~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 124 (411)
T 4a1s_A 47 MCLELALEGERLCNAGDCRAGVAFFQAAIQAG--TEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLG 124 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--CSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhc--ccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchH
Confidence 34455667777888888888888888888764 2233 46777777788888888888777664332 12
Q ss_pred CHHHHHHHHHHHHcCCCHHHHHHHHHHHHhC----C-CCCChhhHHHHHHHHHhcCC-----------------HHHHHH
Q 015370 156 TSETYTALLHLYAGAKWTEKAEELFERVKQS----N-LSFNALMYNEMMTLYMSVGQ-----------------VEKVAL 213 (408)
Q Consensus 156 ~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~----~-~~p~~~~~~~li~~~~~~g~-----------------~~~a~~ 213 (408)
...++..+...|...|++++|...|++..+. + .+....++..+...|...|+ +++|..
T Consensus 125 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~ 204 (411)
T 4a1s_A 125 EAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVE 204 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHH
Confidence 3556677777777777777777777765543 1 11123456666666666666 666666
Q ss_pred HHHHHHhC----CCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHhc
Q 015370 214 VVEEIKRK----NVVP-DIFTYNLWISSCAATLNIDQVKKFLDEMSC 255 (408)
Q Consensus 214 ~~~~m~~~----g~~p-~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~ 255 (408)
.+++..+. +..+ ...++..+...+...|++++|...+++..+
T Consensus 205 ~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 251 (411)
T 4a1s_A 205 FYQENLKLMRDLGDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLR 251 (411)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Confidence 66554321 1111 123444445555555555555555555444
No 56
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.60 E-value=2.9e-14 Score=130.78 Aligned_cols=275 Identities=15% Similarity=0.037 Sum_probs=211.8
Q ss_pred hHHHHHHHHHHHhhcChHHHHHHHhcCCCCCCC-H----HHHHHHHHHHHcCCCHHHHHHHHHHHHhC----C-CCCChh
Q 015370 124 DSDYATRIDLMTKVFGIHSGERYFEGLPLSAKT-S----ETYTALLHLYAGAKWTEKAEELFERVKQS----N-LSFNAL 193 (408)
Q Consensus 124 ~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~-~----~~~~~ll~~~~~~~~~~~A~~~~~~m~~~----~-~~p~~~ 193 (408)
...+..+...+...|++++|...|++.....|+ . .+|..+...|...|++++|...|++..+. + .+....
T Consensus 48 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 127 (411)
T 4a1s_A 48 CLELALEGERLCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAK 127 (411)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHH
Confidence 455667778889999999999999987665443 2 57889999999999999999999987653 1 123456
Q ss_pred hHHHHHHHHHhcCCHHHHHHHHHHHHhC----CCCC-CHHHHHHHHHHHHhcCC-----------------HHHHHHHHH
Q 015370 194 MYNEMMTLYMSVGQVEKVALVVEEIKRK----NVVP-DIFTYNLWISSCAATLN-----------------IDQVKKFLD 251 (408)
Q Consensus 194 ~~~~li~~~~~~g~~~~a~~~~~~m~~~----g~~p-~~~~~~~ll~~~~~~g~-----------------~~~a~~~~~ 251 (408)
++..+...|...|++++|...+++.... +-.| ...++..+...+...|+ +++|.+.++
T Consensus 128 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~ 207 (411)
T 4a1s_A 128 SSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQ 207 (411)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHH
Confidence 8899999999999999999999887653 1112 34578888889999999 999999988
Q ss_pred HHhcC---CCC-CCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccC-c----cchHHHHHHHHHhcCCHHHHHHHH
Q 015370 252 EMSCD---SGG-SDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR-Q----WITYDFLIILYAGLGNKDKIDQIW 322 (408)
Q Consensus 252 ~~~~~---~~~-~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~-~----~~~~~~li~~~~~~~~~~~a~~~~ 322 (408)
+..+. .+. +.....+..+...|...|++++|.. .+.+........ + ...+..+...|...|++++|.+.+
T Consensus 208 ~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~-~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 286 (411)
T 4a1s_A 208 ENLKLMRDLGDRGAQGRACGNLGNTYYLLGDFQAAIE-HHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHY 286 (411)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChHHHHH-HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHHHHHHH
Confidence 76441 111 2234578889999999999999999 888877654321 1 237888999999999999999999
Q ss_pred HHHHhccCCC-----ChhhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCC----CHHHHHHHHHHHHhcCChHHHHHHH
Q 015370 323 KSLRMTKQKM-----TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDF----DISACNRLLGAFSDVGLTEKANEFH 393 (408)
Q Consensus 323 ~~m~~~~~~p-----~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~----~~~~~~~li~~~~~~g~~~~a~~~~ 393 (408)
++........ ....+..+...|...|++++|...+++..+.....+ ...++..+...|.+.|++++|.+.+
T Consensus 287 ~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 366 (411)
T 4a1s_A 287 KRTLALAVELGEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQELGDRIGEARACWSLGNAHSAIGGHERALKYA 366 (411)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 8876543211 145677889999999999999999998875321111 2457888999999999999999999
Q ss_pred HHHHhc
Q 015370 394 MLLLQK 399 (408)
Q Consensus 394 ~~m~~~ 399 (408)
++..+.
T Consensus 367 ~~al~~ 372 (411)
T 4a1s_A 367 EQHLQL 372 (411)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988753
No 57
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.59 E-value=6.8e-14 Score=124.06 Aligned_cols=278 Identities=13% Similarity=0.040 Sum_probs=155.8
Q ss_pred hHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCC----hHHHHHHHHHHHhhcChHHHHHHHhcCCCCCCCHHHHHHHHH
Q 015370 90 ELRHILKELRKSQRYKHALEISEWMVTHKEFVLS----DSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLH 165 (408)
Q Consensus 90 ~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~----~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~ll~ 165 (408)
.+......+...|++++|+..|+++.+.. +.+ ...+..+...+...|++++|.+.+++....
T Consensus 7 ~l~~~g~~~~~~g~~~~A~~~~~~al~~~--~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~------------ 72 (338)
T 3ro2_A 7 ELALEGERLCKSGDCRAGVSFFEAAVQVG--TEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTL------------ 72 (338)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC--CSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------------
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhC--cccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH------------
Confidence 34445556666677777777777666643 112 234455555555556655555555443221
Q ss_pred HHHcCCCHHHHHHHHHHHHhCCC-CCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCC-CCC----HHHHHHHHHHHHh
Q 015370 166 LYAGAKWTEKAEELFERVKQSNL-SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNV-VPD----IFTYNLWISSCAA 239 (408)
Q Consensus 166 ~~~~~~~~~~A~~~~~~m~~~~~-~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~-~p~----~~~~~~ll~~~~~ 239 (408)
....+- +....++..+...|...|++++|...+++..+... .++ ..++..+...+..
T Consensus 73 -----------------~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~ 135 (338)
T 3ro2_A 73 -----------------ARTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHA 135 (338)
T ss_dssp -----------------HHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred -----------------hhcccccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Confidence 000000 01123344444444444555555444444332100 001 2244444445555
Q ss_pred cCC--------------------HHHHHHHHHHHhcC---CC-CCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcc
Q 015370 240 TLN--------------------IDQVKKFLDEMSCD---SG-GSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 295 (408)
Q Consensus 240 ~g~--------------------~~~a~~~~~~~~~~---~~-~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~ 295 (408)
.|+ +++|.+.+++.... .+ .+.....+..+...|...|++++|.. .+.+..+...
T Consensus 136 ~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~-~~~~a~~~~~ 214 (338)
T 3ro2_A 136 KGKSFGCPGPQDTGEFPEDVRNALQAAVDLYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVI-AHEQRLLIAK 214 (338)
T ss_dssp HHHTSSSSSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHH-HHHHHHHHHH
T ss_pred cCcccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHH-HHHHHHHHHH
Confidence 555 55555555443221 01 11123346667777777777777777 6666554322
Q ss_pred cC-----ccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCC-CC----hhhHHHHHHHHHhcCCHHHHHHHHHHHHhhCC
Q 015370 296 QR-----QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK-MT----SRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 365 (408)
Q Consensus 296 ~~-----~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~-p~----~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~ 365 (408)
.. ...++..+...+...|++++|.+.+++....... .+ ..++..+...+...|++++|...+++..+...
T Consensus 215 ~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 294 (338)
T 3ro2_A 215 EFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQ 294 (338)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred hcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 11 1236777788888888988888888876543221 11 34566778888899999999999988765321
Q ss_pred CCCC----HHHHHHHHHHHHhcCChHHHHHHHHHHHhc
Q 015370 366 SDFD----ISACNRLLGAFSDVGLTEKANEFHMLLLQK 399 (408)
Q Consensus 366 ~~~~----~~~~~~li~~~~~~g~~~~a~~~~~~m~~~ 399 (408)
...+ ..++..+...|.+.|++++|...+++..+.
T Consensus 295 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 332 (338)
T 3ro2_A 295 ELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEI 332 (338)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHC
T ss_pred hcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 1112 446778888999999999999999988763
No 58
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.56 E-value=1.7e-13 Score=121.39 Aligned_cols=269 Identities=13% Similarity=0.006 Sum_probs=156.9
Q ss_pred hhcCCCCcHHHHHHHHHHcCCCCC----hhhHHHHHHHHHhcccHHHHHHHHHHHHhccCCCC----ChHHHHHHHHHHH
Q 015370 64 RISLPKRSATNVIQRWVSEGNQAT----VSELRHILKELRKSQRYKHALEISEWMVTHKEFVL----SDSDYATRIDLMT 135 (408)
Q Consensus 64 ~~~~~~~~a~~~l~~~~~~g~~~~----~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~----~~~~~~~li~~~~ 135 (408)
....+.+.|...+++..+... .+ ...+..+...+...|++++|++.+++..+...-.+ ....+..+...+.
T Consensus 16 ~~~g~~~~A~~~~~~al~~~~-~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~ 94 (338)
T 3ro2_A 16 CKSGDCRAGVSFFEAAVQVGT-EDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLK 94 (338)
T ss_dssp HHTTCHHHHHHHHHHHHHHCC-SCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHhhCc-ccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHH
Confidence 334667889999999888742 23 46788899999999999999999998765310001 1234444555555
Q ss_pred hhcChHHHHHHHhcCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCC-CCChhhHHHHHHHHHhcCC-------
Q 015370 136 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNL-SFNALMYNEMMTLYMSVGQ------- 207 (408)
Q Consensus 136 ~~g~~~~a~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~-~p~~~~~~~li~~~~~~g~------- 207 (408)
..|++++|...+++..... ...+- .....++..+...|...|+
T Consensus 95 ~~g~~~~A~~~~~~al~~~-----------------------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 145 (338)
T 3ro2_A 95 VLGNFDEAIVCCQRHLDIS-----------------------------RELNDKVGEARALYNLGNVYHAKGKSFGCPGP 145 (338)
T ss_dssp HTTCHHHHHHHHHHHHHHH-----------------------------HHTTCHHHHHHHHHHHHHHHHHHHHTSSSSSC
T ss_pred HccCHHHHHHHHHHHHHHH-----------------------------HHhcCchHHHHHHHHHHHHHHHcCcccccchh
Confidence 5555555555544432210 00000 0012244444555555555
Q ss_pred -------------HHHHHHHHHHHHhC----CCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCC---C-CCCCHHH
Q 015370 208 -------------VEKVALVVEEIKRK----NVVP-DIFTYNLWISSCAATLNIDQVKKFLDEMSCDS---G-GSDDWVK 265 (408)
Q Consensus 208 -------------~~~a~~~~~~m~~~----g~~p-~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~---~-~~~~~~~ 265 (408)
+++|...+++.... +..| ...++..+...+...|++++|...+++..+.. + ......+
T Consensus 146 ~~~~~~~~~a~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~ 225 (338)
T 3ro2_A 146 QDTGEFPEDVRNALQAAVDLYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRA 225 (338)
T ss_dssp C----CCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHH
Confidence 55555555443321 1111 12345555556666666666666666554310 0 0011225
Q ss_pred HHHHHHHHHHcCchhhhHHHHHHHHHHhcccC-----ccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCC-C----Chh
Q 015370 266 YVNLVNIYITASHLVNAESSTLVEAEKSITQR-----QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK-M----TSR 335 (408)
Q Consensus 266 ~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~-----~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~-p----~~~ 335 (408)
+..+...+...|++++|.. .+.+........ ...++..+...+...|++++|...+++....... . ...
T Consensus 226 ~~~l~~~~~~~g~~~~A~~-~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~ 304 (338)
T 3ro2_A 226 YSNLGNAYIFLGEFETASE-YYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGR 304 (338)
T ss_dssp HHHHHHHHHHHTCHHHHHH-HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHH-HHHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHH
Confidence 6667777777777777777 666655432221 1446667777888888888888888876543211 1 133
Q ss_pred hHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q 015370 336 NYICILSSYLMLGHLKEVGEIIDQWKQS 363 (408)
Q Consensus 336 ~~~~li~~~~~~g~~~~A~~~~~~~~~~ 363 (408)
++..+...|.+.|++++|...+++..+.
T Consensus 305 ~~~~la~~~~~~g~~~~A~~~~~~a~~~ 332 (338)
T 3ro2_A 305 ACWSLGNAYTALGNHDQAMHFAEKHLEI 332 (338)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 5667888888999999999999888763
No 59
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.55 E-value=5.1e-13 Score=121.36 Aligned_cols=298 Identities=9% Similarity=-0.047 Sum_probs=207.8
Q ss_pred HHhcccHHHHHHHHHHHHhcc-CCCCChH--HHHHHHHH--HHhhcChHHHH-----------HHHhcCCCCCCCHH---
Q 015370 98 LRKSQRYKHALEISEWMVTHK-EFVLSDS--DYATRIDL--MTKVFGIHSGE-----------RYFEGLPLSAKTSE--- 158 (408)
Q Consensus 98 ~~~~~~~~~a~~~~~~~~~~~-~~~~~~~--~~~~li~~--~~~~g~~~~a~-----------~~~~~~~~~~~~~~--- 158 (408)
+.+.+++++|..+++.+.+.- ....|.. .|-.++.. ....++++.+. +.++.+...+.+..
T Consensus 22 ~i~~~~~~~A~~l~~~i~~~~~~~~~~~~~~~y~~ll~~r~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~l 101 (383)
T 3ulq_A 22 YIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPRLSDLLLEIDKKQARLTGLL 101 (383)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHGGGGGSCGGGSCCHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHcCHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHhhcCcccccccccccchhhHHHHHHhcCCCchhHH
Confidence 356789999999999987642 1223432 23333322 12233444444 55555433222212
Q ss_pred ---HHHHHHHHHHcCCCHHHHHHHHHHHHhC----CCCC-ChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCC--C---CC
Q 015370 159 ---TYTALLHLYAGAKWTEKAEELFERVKQS----NLSF-NALMYNEMMTLYMSVGQVEKVALVVEEIKRKN--V---VP 225 (408)
Q Consensus 159 ---~~~~ll~~~~~~~~~~~A~~~~~~m~~~----~~~p-~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g--~---~p 225 (408)
.+......+...|++++|...|++.... +-++ ...+|..+...|...|++++|...+++..+.- . .+
T Consensus 102 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~ 181 (383)
T 3ulq_A 102 EYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNI 181 (383)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchH
Confidence 2233567788999999999999998864 2111 34688999999999999999999998876421 1 11
Q ss_pred -CHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCC---CCC-CCHHHHHHHHHHHHHcCchhhhHHHHHHHHHH-----hcc
Q 015370 226 -DIFTYNLWISSCAATLNIDQVKKFLDEMSCDS---GGS-DDWVKYVNLVNIYITASHLVNAESSTLVEAEK-----SIT 295 (408)
Q Consensus 226 -~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~---~~~-~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~-----~~~ 295 (408)
...++..+...|...|++++|...+++..+.. +.. ....++..+...|...|++++|.. .+.+... ...
T Consensus 182 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~-~~~~al~~~~~~~~~ 260 (383)
T 3ulq_A 182 RLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIP-YFKRAIAVFEESNIL 260 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHHHHHTTCG
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHhhccc
Confidence 23578888889999999999999999876521 111 112468889999999999999999 8888776 221
Q ss_pred cCccchHHHHHHHHHhcCCHHHHHHHHHHHHhccC---CC-ChhhHHHHHHHHHhcCC---HHHHHHHHHHHHhhCCCCC
Q 015370 296 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ---KM-TSRNYICILSSYLMLGH---LKEVGEIIDQWKQSATSDF 368 (408)
Q Consensus 296 ~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~---~p-~~~~~~~li~~~~~~g~---~~~A~~~~~~~~~~~~~~~ 368 (408)
+....++..+...|...|++++|.+.+++..+... .| ....+..+...+...|+ +++|..++++.. ..+.
T Consensus 261 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~---~~~~ 337 (383)
T 3ulq_A 261 PSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAIQGFFDFLESKM---LYAD 337 (383)
T ss_dssp GGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHTT---CHHH
T ss_pred hhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCc---CHHH
Confidence 33466788999999999999999999998665421 11 12235667778888898 788888887752 1222
Q ss_pred CHHHHHHHHHHHHhcCChHHHHHHHHHHHhc
Q 015370 369 DISACNRLLGAFSDVGLTEKANEFHMLLLQK 399 (408)
Q Consensus 369 ~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~ 399 (408)
....+..+...|...|++++|.+.+++..+.
T Consensus 338 ~~~~~~~la~~y~~~g~~~~A~~~~~~al~~ 368 (383)
T 3ulq_A 338 LEDFAIDVAKYYHERKNFQKASAYFLKVEQV 368 (383)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 3456778999999999999999999998753
No 60
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.55 E-value=1.1e-11 Score=109.00 Aligned_cols=235 Identities=11% Similarity=0.018 Sum_probs=158.9
Q ss_pred hHHHHHHHHHHHhh----cCh----HHHHHHHhcCCCC-CCCHHHHHHHHHHHH-------cCCCH-------HHHHHHH
Q 015370 124 DSDYATRIDLMTKV----FGI----HSGERYFEGLPLS-AKTSETYTALLHLYA-------GAKWT-------EKAEELF 180 (408)
Q Consensus 124 ~~~~~~li~~~~~~----g~~----~~a~~~~~~~~~~-~~~~~~~~~ll~~~~-------~~~~~-------~~A~~~~ 180 (408)
...|...+...-+. ++. ++|..+|++.... +.+...|..++..+. +.|++ ++|..+|
T Consensus 8 ~~~W~~yi~~E~~~~~~~~~~~~~~~~a~~~~~~al~~~p~~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~ 87 (308)
T 2ond_A 8 VDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIY 87 (308)
T ss_dssp HHHHHHHHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcccCCchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHH
Confidence 34566666654443 122 5677777776654 456777877777765 34665 7888888
Q ss_pred HHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCC-HH-HHHHHHHHHHhcCCHHHHHHHHHHHhcCCC
Q 015370 181 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPD-IF-TYNLWISSCAATLNIDQVKKFLDEMSCDSG 258 (408)
Q Consensus 181 ~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~-~~-~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~ 258 (408)
++....-.+-+...|..++..+.+.|++++|..+|++..+. .|+ .. .|..+...+.+.|++++|..+|++..+.
T Consensus 88 ~rAl~~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~--~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~-- 163 (308)
T 2ond_A 88 ERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAI--EDIDPTLVYIQYMKFARRAEGIKSGRMIFKKARED-- 163 (308)
T ss_dssp HHHHTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS--SSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTS--
T ss_pred HHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc--cccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhc--
Confidence 88877311335567888888888888888888888888774 343 22 6777777778888888888888888763
Q ss_pred CCCCHHHHHHHHHHHH-HcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCHHHHHHHHHHHHhcc-CCC--Ch
Q 015370 259 GSDDWVKYVNLVNIYI-TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK-QKM--TS 334 (408)
Q Consensus 259 ~~~~~~~~~~li~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~-~~p--~~ 334 (408)
.+++...|........ ..|+.++|.. +++...+..+. +...|..++..+.+.|++++|..+|++..... ..| ..
T Consensus 164 ~p~~~~~~~~~a~~~~~~~~~~~~A~~-~~~~al~~~p~-~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~~l~p~~~~ 241 (308)
T 2ond_A 164 ARTRHHVYVTAALMEYYCSKDKSVAFK-IFELGLKKYGD-IPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSG 241 (308)
T ss_dssp TTCCTHHHHHHHHHHHHTSCCHHHHHH-HHHHHHHHHTT-CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHSSSSCGGGCH
T ss_pred CCCCHHHHHHHHHHHHHHcCCHHHHHH-HHHHHHHhCCC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhccCCCHHHHH
Confidence 2344455544433322 2578888888 77777665443 56777777777778888888888888777652 233 23
Q ss_pred hhHHHHHHHHHhcCCHHHHHHHHHHHHhhC
Q 015370 335 RNYICILSSYLMLGHLKEVGEIIDQWKQSA 364 (408)
Q Consensus 335 ~~~~~li~~~~~~g~~~~A~~~~~~~~~~~ 364 (408)
..|..++....+.|+.++|..+++++.+..
T Consensus 242 ~l~~~~~~~~~~~g~~~~a~~~~~~a~~~~ 271 (308)
T 2ond_A 242 EIWARFLAFESNIGDLASILKVEKRRFTAF 271 (308)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHc
Confidence 456667777777888888888888877754
No 61
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.54 E-value=1.1e-11 Score=109.00 Aligned_cols=217 Identities=9% Similarity=-0.032 Sum_probs=176.7
Q ss_pred HHHHHHHHHHHhccCCCCChHHHHHHHHHHHh-------hcCh-------HHHHHHHhcCCC-CCC-CHHHHHHHHHHHH
Q 015370 105 KHALEISEWMVTHKEFVLSDSDYATRIDLMTK-------VFGI-------HSGERYFEGLPL-SAK-TSETYTALLHLYA 168 (408)
Q Consensus 105 ~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~-------~g~~-------~~a~~~~~~~~~-~~~-~~~~~~~ll~~~~ 168 (408)
++|..+|++..... +.++..|..++..+.. .|++ ++|..+|++... ..| +...|..++..+.
T Consensus 33 ~~a~~~~~~al~~~--p~~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~ 110 (308)
T 2ond_A 33 KRVMFAYEQCLLVL--GHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEE 110 (308)
T ss_dssp HHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence 68889999998864 5677888888877763 5886 899999999877 344 5779999999999
Q ss_pred cCCCHHHHHHHHHHHHhCCCCCC-hh-hHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHH-hcCCHHH
Q 015370 169 GAKWTEKAEELFERVKQSNLSFN-AL-MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCA-ATLNIDQ 245 (408)
Q Consensus 169 ~~~~~~~A~~~~~~m~~~~~~p~-~~-~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~-~~g~~~~ 245 (408)
+.|++++|.++|++..+. .|+ .. +|..+...+.+.|++++|..+|++..+... ++...|........ ..|++++
T Consensus 111 ~~~~~~~A~~~~~~al~~--~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p-~~~~~~~~~a~~~~~~~~~~~~ 187 (308)
T 2ond_A 111 SRMKYEKVHSIYNRLLAI--EDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDAR-TRHHVYVTAALMEYYCSKDKSV 187 (308)
T ss_dssp HTTCHHHHHHHHHHHHTS--SSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTT-CCTHHHHHHHHHHHHTSCCHHH
T ss_pred hcCCHHHHHHHHHHHHhc--cccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC-CCHHHHHHHHHHHHHHcCCHHH
Confidence 999999999999999985 343 44 899999999999999999999999998643 24444543333322 3699999
Q ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhc-ccC--ccchHHHHHHHHHhcCCHHHHHHHH
Q 015370 246 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI-TQR--QWITYDFLIILYAGLGNKDKIDQIW 322 (408)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~-~~~--~~~~~~~li~~~~~~~~~~~a~~~~ 322 (408)
|..+|++..+. .+.+...|..++..+.+.|++++|.. ++++..... .+| ....|..++..+.+.|+.+.|..++
T Consensus 188 A~~~~~~al~~--~p~~~~~~~~~~~~~~~~g~~~~A~~-~~~~al~~~~l~p~~~~~l~~~~~~~~~~~g~~~~a~~~~ 264 (308)
T 2ond_A 188 AFKIFELGLKK--YGDIPEYVLAYIDYLSHLNEDNNTRV-LFERVLTSGSLPPEKSGEIWARFLAFESNIGDLASILKVE 264 (308)
T ss_dssp HHHHHHHHHHH--HTTCHHHHHHHHHHHHTTCCHHHHHH-HHHHHHHSSSSCGGGCHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred HHHHHHHHHHh--CCCcHHHHHHHHHHHHHCCCHHHHHH-HHHHHHhccCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 99999999873 35578889999999999999999999 999988853 233 4668888999999999999999999
Q ss_pred HHHHhcc
Q 015370 323 KSLRMTK 329 (408)
Q Consensus 323 ~~m~~~~ 329 (408)
+++.+..
T Consensus 265 ~~a~~~~ 271 (308)
T 2ond_A 265 KRRFTAF 271 (308)
T ss_dssp HHHHHHT
T ss_pred HHHHHHc
Confidence 9988764
No 62
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.53 E-value=1.3e-13 Score=121.16 Aligned_cols=240 Identities=13% Similarity=0.026 Sum_probs=158.9
Q ss_pred CHHHHHHHHHHHHcCCCHHHHHHHHHHHHhC-------CCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhC------C
Q 015370 156 TSETYTALLHLYAGAKWTEKAEELFERVKQS-------NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK------N 222 (408)
Q Consensus 156 ~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~-------~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~------g 222 (408)
+..++..+...+...|++++|..+|+++.+. ..+....++..+...|...|++++|...+++.... +
T Consensus 26 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 105 (311)
T 3nf1_A 26 RLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGK 105 (311)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCC
Confidence 3677888888888888888888888887762 22334567788888888888888888888877653 2
Q ss_pred CCC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCC-----C-CCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhc-
Q 015370 223 VVP-DIFTYNLWISSCAATLNIDQVKKFLDEMSCDS-----G-GSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI- 294 (408)
Q Consensus 223 ~~p-~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~-----~-~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~- 294 (408)
-.| ...++..+...+...|++++|...++++.+.. + .+.....+..+...|...|++++|.. .+.+.....
T Consensus 106 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~-~~~~a~~~~~ 184 (311)
T 3nf1_A 106 DHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEY-YYQRALEIYQ 184 (311)
T ss_dssp TCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHH-HHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHH-HHHHHHHHHH
Confidence 222 35667777888888888888888888776521 1 12344557788888888888888888 777776541
Q ss_pred ------ccCccchHHHHHHHHHhcCCHHHHHHHHHHHHhcc-------CCCChhh-------HHHHHHHHHhcCCHHHHH
Q 015370 295 ------TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK-------QKMTSRN-------YICILSSYLMLGHLKEVG 354 (408)
Q Consensus 295 ------~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~-------~~p~~~~-------~~~li~~~~~~g~~~~A~ 354 (408)
.+....++..+...|...|++++|.+.+++..+.. ..+.... +..+...+...+.+.+|.
T Consensus 185 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 264 (311)
T 3nf1_A 185 TKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYG 264 (311)
T ss_dssp HTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHC------CCHHHHHHHHHHC-------CCSCCCC
T ss_pred HHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHH
Confidence 12234567788888888999999999888876531 1122111 222333344556666677
Q ss_pred HHHHHHHhhCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHh
Q 015370 355 EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398 (408)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~ 398 (408)
..++...... +.+..+|..+..+|.+.|++++|.+++++.++
T Consensus 265 ~~~~~~~~~~--~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 306 (311)
T 3nf1_A 265 GWYKACKVDS--PTVTTTLKNLGALYRRQGKFEAAETLEEAAMR 306 (311)
T ss_dssp ---------C--HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHhhcCCCC--chHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 7777665432 33567788899999999999999999998876
No 63
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.50 E-value=8.2e-13 Score=123.31 Aligned_cols=214 Identities=11% Similarity=-0.069 Sum_probs=168.4
Q ss_pred ChHHHHHHHhcCCCCC-CCHHHHHHHHHHHHcCCCH-HHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHH
Q 015370 139 GIHSGERYFEGLPLSA-KTSETYTALLHLYAGAKWT-EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216 (408)
Q Consensus 139 ~~~~a~~~~~~~~~~~-~~~~~~~~ll~~~~~~~~~-~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~ 216 (408)
.++++.+.+++..... .+...|..+...+...|++ ++|++.|++..+.. +-+..+|..+...|.+.|++++|...|+
T Consensus 83 ~~~~al~~l~~~~~~~~~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~-p~~~~a~~~lg~~~~~~g~~~~A~~~~~ 161 (474)
T 4abn_A 83 EMEKTLQQMEEVLGSAQVEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLE-PELVEAWNQLGEVYWKKGDVTSAHTCFS 161 (474)
T ss_dssp HHHHHHHHHHHHHTTCCCCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCchhHHHHHHHHHHHHhccccHHHHHHHHHHHHhhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 3566666666655443 4688888888999999999 99999999888765 4457889999999999999999999999
Q ss_pred HHHhCCCCCCHHHHHHHHHHHHhc---------CCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHc--------Cch
Q 015370 217 EIKRKNVVPDIFTYNLWISSCAAT---------LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA--------SHL 279 (408)
Q Consensus 217 ~m~~~g~~p~~~~~~~ll~~~~~~---------g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~--------~~~ 279 (408)
+..+. .|+...+..+...+... |++++|.+.+++..+. .+.+...|..+..+|... |++
T Consensus 162 ~al~~--~p~~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~--~p~~~~~~~~lg~~~~~~~~~~~~~~g~~ 237 (474)
T 4abn_A 162 GALTH--CKNKVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQM--DVLDGRSWYILGNAYLSLYFNTGQNPKIS 237 (474)
T ss_dssp HHHTT--CCCHHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHHhh--CCCHHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHHHHhhccccchH
Confidence 88875 46677888888888888 8999999999988873 355677888888888888 889
Q ss_pred hhhHHHHHHHHHHhccc--CccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHH
Q 015370 280 VNAESSTLVEAEKSITQ--RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 357 (408)
Q Consensus 280 ~~a~~~~~~~~~~~~~~--~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~ 357 (408)
++|.. .+++..+..+. .+...|..+...|...|++++|.+.|++..+.... +...+..+...+...|++++|.+.+
T Consensus 238 ~~A~~-~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~-~~~a~~~l~~~~~~lg~~~eAi~~~ 315 (474)
T 4abn_A 238 QQALS-AYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPA-WPEPQQREQQLLEFLSRLTSLLESK 315 (474)
T ss_dssp HHHHH-HHHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHH-HHHHHHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99998 88887776441 46778888888888999999999999887776422 4456777788888888888888765
Q ss_pred HH
Q 015370 358 DQ 359 (408)
Q Consensus 358 ~~ 359 (408)
.+
T Consensus 316 ~~ 317 (474)
T 4abn_A 316 GK 317 (474)
T ss_dssp TT
T ss_pred cc
Confidence 54
No 64
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.50 E-value=5e-12 Score=102.06 Aligned_cols=165 Identities=13% Similarity=0.058 Sum_probs=81.6
Q ss_pred CHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHH
Q 015370 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235 (408)
Q Consensus 156 ~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~ 235 (408)
+..+|..+...|.+.|++++|++.|++..+.. |-+..+|..+...|.+.|++++|...+......... +...+..+..
T Consensus 4 ~~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~ 81 (184)
T 3vtx_A 4 TTTIYMDIGDKKRTKGDFDGAIRAYKKVLKAD-PNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTT-SAEAYYILGS 81 (184)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCch-hHHHHHHHHH
Confidence 44555555555555555555555555555443 234455555555555555555555555555443222 3344444444
Q ss_pred HHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCH
Q 015370 236 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 315 (408)
Q Consensus 236 ~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~ 315 (408)
.+...++++.+...+++.... .+.+...+..+...|.+.|++++|++ .+++..+..+. +..+|..+...|.+.|++
T Consensus 82 ~~~~~~~~~~a~~~~~~a~~~--~~~~~~~~~~lg~~~~~~g~~~~A~~-~~~~~l~~~p~-~~~~~~~lg~~~~~~g~~ 157 (184)
T 3vtx_A 82 ANFMIDEKQAAIDALQRAIAL--NTVYADAYYKLGLVYDSMGEHDKAIE-AYEKTISIKPG-FIRAYQSIGLAYEGKGLR 157 (184)
T ss_dssp HHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHHCTT-CHHHHHHHHHHHHHTTCH
T ss_pred HHHHcCCHHHHHHHHHHHHHh--CccchHHHHHHHHHHHHhCCchhHHH-HHHHHHHhcch-hhhHHHHHHHHHHHCCCH
Confidence 555555555555555554441 23344444455555555555555555 44444433222 334444444455555555
Q ss_pred HHHHHHHHHHH
Q 015370 316 DKIDQIWKSLR 326 (408)
Q Consensus 316 ~~a~~~~~~m~ 326 (408)
++|.+.|++..
T Consensus 158 ~~A~~~~~~al 168 (184)
T 3vtx_A 158 DEAVKYFKKAL 168 (184)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 55555554443
No 65
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=99.50 E-value=3.9e-11 Score=120.08 Aligned_cols=252 Identities=10% Similarity=0.063 Sum_probs=140.8
Q ss_pred HHHHHhcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHHHHhcCCCCCCCHHHHHHHHHHHHcCCCHH
Q 015370 95 LKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE 174 (408)
Q Consensus 95 i~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~ 174 (408)
...+...|.+++|..+|++... .....+.++ ...+++++|.++.++.. +..+|..+..++.+.|+++
T Consensus 1056 A~Iai~lglyEEAf~IYkKa~~------~~~A~~VLi---e~i~nldrAiE~Aervn----~p~vWsqLAKAql~~G~~k 1122 (1630)
T 1xi4_A 1056 ANIAISNELFEEAFAIFRKFDV------NTSAVQVLI---EHIGNLDRAYEFAERCN----EPAVWSQLAKAQLQKGMVK 1122 (1630)
T ss_pred HHHHHhCCCHHHHHHHHHHcCC------HHHHHHHHH---HHHhhHHHHHHHHHhcC----CHHHHHHHHHHHHhCCCHH
Confidence 3445555666666666666421 112222222 25556666666665442 4566667777777777777
Q ss_pred HHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHh
Q 015370 175 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 254 (408)
Q Consensus 175 ~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~ 254 (408)
+|...|.+. -|...|..++.++.+.|++++|.+.|...++.. ++....+.++.+|++.+++++...+.
T Consensus 1123 EAIdsYiKA------dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~--~e~~Idt~LafaYAKl~rleele~fI---- 1190 (1630)
T 1xi4_A 1123 EAIDSYIKA------DDPSSYMEVVQAANTSGNWEELVKYLQMARKKA--RESYVETELIFALAKTNRLAELEEFI---- 1190 (1630)
T ss_pred HHHHHHHhc------CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhc--ccccccHHHHHHHHhhcCHHHHHHHH----
Confidence 777777443 256666777777777777777777776655543 23223334666666666666433332
Q ss_pred cCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCCh
Q 015370 255 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 334 (408)
Q Consensus 255 ~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~ 334 (408)
+ .++...|..+...|...|++++|.. ++... ..|..+...|.+.|++++|.+.+++. -+.
T Consensus 1191 ~----~~n~ad~~~iGd~le~eg~YeeA~~-~Y~kA---------~ny~rLA~tLvkLge~q~AIEaarKA------~n~ 1250 (1630)
T 1xi4_A 1191 N----GPNNAHIQQVGDRCYDEKMYDAAKL-LYNNV---------SNFGRLASTLVHLGEYQAAVDGARKA------NST 1250 (1630)
T ss_pred h----CCCHHHHHHHHHHHHhcCCHHHHHH-HHHhh---------hHHHHHHHHHHHhCCHHHHHHHHHHh------CCH
Confidence 2 1344455566666667777777766 55542 36666666677777777776666543 133
Q ss_pred hhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHH
Q 015370 335 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 397 (408)
Q Consensus 335 ~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~ 397 (408)
.+|..+-.+|...|++..|......+ ..+...+..++..|.+.|.+++|..+++..+
T Consensus 1251 ~aWkev~~acve~~Ef~LA~~cgl~I------iv~~deLeeli~yYe~~G~feEAI~LlE~aL 1307 (1630)
T 1xi4_A 1251 RTWKEVCFACVDGKEFRLAQMCGLHI------VVHADELEELINYYQDRGYFEELITMLEAAL 1307 (1630)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHhh------hcCHHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 44544444555555555554443321 1233344456666666666666666665543
No 66
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.49 E-value=2.4e-12 Score=120.16 Aligned_cols=215 Identities=10% Similarity=-0.076 Sum_probs=183.8
Q ss_pred CHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCH-HHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHH
Q 015370 172 WTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 250 (408)
Q Consensus 172 ~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~-~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~ 250 (408)
.++++++.+++..... +.+...|..+...+...|++ ++|+..|++..+.... +..+|..+..+|...|++++|.+.|
T Consensus 83 ~~~~al~~l~~~~~~~-~~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~ 160 (474)
T 4abn_A 83 EMEKTLQQMEEVLGSA-QVEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPE-LVEAWNQLGEVYWKKGDVTSAHTCF 160 (474)
T ss_dssp HHHHHHHHHHHHHTTC-CCCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHHHhccC-chhHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 3677888888877654 45788999999999999999 9999999999886432 5789999999999999999999999
Q ss_pred HHHhcCCCCCCCHHHHHHHHHHHHHc---------CchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhc--------C
Q 015370 251 DEMSCDSGGSDDWVKYVNLVNIYITA---------SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL--------G 313 (408)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~li~~~~~~---------~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~--------~ 313 (408)
++..+. .|+...+..+...|... |++++|.. .+++..+..+. +...|..+...|... |
T Consensus 161 ~~al~~---~p~~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~-~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~~~~g 235 (474)
T 4abn_A 161 SGALTH---CKNKVSLQNLSMVLRQLQTDSGDEHSRHVMDSVR-QAKLAVQMDVL-DGRSWYILGNAYLSLYFNTGQNPK 235 (474)
T ss_dssp HHHHTT---CCCHHHHHHHHHHHTTCCCSCHHHHHHHHHHHHH-HHHHHHHHCTT-CHHHHHHHHHHHHHHHHHTTCCHH
T ss_pred HHHHhh---CCCHHHHHHHHHHHHHhccCChhhhhhhHHHHHH-HHHHHHHhCCC-CHHHHHHHHHHHHHHHHhhccccc
Confidence 999984 36678899999999999 99999999 88888776544 678899999999998 9
Q ss_pred CHHHHHHHHHHHHhccCC--CChhhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHhcCChHHHHH
Q 015370 314 NKDKIDQIWKSLRMTKQK--MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 391 (408)
Q Consensus 314 ~~~~a~~~~~~m~~~~~~--p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~ 391 (408)
++++|++.|++..+.... -+...|..+..+|...|++++|.+.|++..+.. +.+...+..+..++...|++++|.+
T Consensus 236 ~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~--p~~~~a~~~l~~~~~~lg~~~eAi~ 313 (474)
T 4abn_A 236 ISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALD--PAWPEPQQREQQLLEFLSRLTSLLE 313 (474)
T ss_dssp HHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998876421 267788899999999999999999999998865 4467788899999999999999987
Q ss_pred HHHH
Q 015370 392 FHML 395 (408)
Q Consensus 392 ~~~~ 395 (408)
.+.+
T Consensus 314 ~~~~ 317 (474)
T 4abn_A 314 SKGK 317 (474)
T ss_dssp HTTT
T ss_pred Hhcc
Confidence 5543
No 67
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.49 E-value=1.2e-11 Score=99.69 Aligned_cols=166 Identities=14% Similarity=0.047 Sum_probs=92.2
Q ss_pred ChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHH
Q 015370 191 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 270 (408)
Q Consensus 191 ~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li 270 (408)
++.+|..+...|.+.|++++|++.|++..+.... +..++..+..++.+.|++++|...++..... .+.+...+..+.
T Consensus 4 ~~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~--~~~~~~~~~~~~ 80 (184)
T 3vtx_A 4 TTTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPN-NVETLLKLGKTYMDIGLPNDAIESLKKFVVL--DTTSAEAYYILG 80 (184)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc--CchhHHHHHHHH
Confidence 4556666666666666666666666666654322 4555666666666666666666666665552 233445555555
Q ss_pred HHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCH
Q 015370 271 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 350 (408)
Q Consensus 271 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~ 350 (408)
..+...++++.|.. .+.......+. +...+..+...|.+.|++++|++.|++..+.... +...|..+..+|.+.|++
T Consensus 81 ~~~~~~~~~~~a~~-~~~~a~~~~~~-~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~lg~~~~~~g~~ 157 (184)
T 3vtx_A 81 SANFMIDEKQAAID-ALQRAIALNTV-YADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPG-FIRAYQSIGLAYEGKGLR 157 (184)
T ss_dssp HHHHHTTCHHHHHH-HHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCH
T ss_pred HHHHHcCCHHHHHH-HHHHHHHhCcc-chHHHHHHHHHHHHhCCchhHHHHHHHHHHhcch-hhhHHHHHHHHHHHCCCH
Confidence 55666666666665 55544433222 4445555555555555555555555555544321 344455555555555555
Q ss_pred HHHHHHHHHHHh
Q 015370 351 KEVGEIIDQWKQ 362 (408)
Q Consensus 351 ~~A~~~~~~~~~ 362 (408)
++|...|++..+
T Consensus 158 ~~A~~~~~~al~ 169 (184)
T 3vtx_A 158 DEAVKYFKKALE 169 (184)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 555555555554
No 68
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=99.47 E-value=7.3e-11 Score=118.21 Aligned_cols=257 Identities=9% Similarity=0.036 Sum_probs=149.7
Q ss_pred hcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHHHHhcCCCCCCCHHHHHHHHHHHHcCCCHHHHHHH
Q 015370 100 KSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEEL 179 (408)
Q Consensus 100 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~A~~~ 179 (408)
..+++++|.++.++. -++.+|..+..++...|++++|...|.+. .|...|..++.++.+.|++++|.+.
T Consensus 1088 ~i~nldrAiE~Aerv-------n~p~vWsqLAKAql~~G~~kEAIdsYiKA----dD~say~eVa~~~~~lGkyEEAIey 1156 (1630)
T 1xi4_A 1088 HIGNLDRAYEFAERC-------NEPAVWSQLAKAQLQKGMVKEAIDSYIKA----DDPSSYMEVVQAANTSGNWEELVKY 1156 (1630)
T ss_pred HHhhHHHHHHHHHhc-------CCHHHHHHHHHHHHhCCCHHHHHHHHHhc----CChHHHHHHHHHHHHcCCHHHHHHH
Confidence 556777777777644 13566777777777777777777777553 4666677777777777777777777
Q ss_pred HHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCC
Q 015370 180 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG 259 (408)
Q Consensus 180 ~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~ 259 (408)
|...++.. +++...+.++.+|++.+++++...+. . .|+...|..+...|...|++++|..+|...
T Consensus 1157 L~mArk~~--~e~~Idt~LafaYAKl~rleele~fI----~---~~n~ad~~~iGd~le~eg~YeeA~~~Y~kA------ 1221 (1630)
T 1xi4_A 1157 LQMARKKA--RESYVETELIFALAKTNRLAELEEFI----N---GPNNAHIQQVGDRCYDEKMYDAAKLLYNNV------ 1221 (1630)
T ss_pred HHHHHhhc--ccccccHHHHHHHHhhcCHHHHHHHH----h---CCCHHHHHHHHHHHHhcCCHHHHHHHHHhh------
Confidence 77666543 33333334677777777666533332 1 234455555666677777777777777663
Q ss_pred CCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHh------------------------cccCccchHHHHHHHHHhcCCH
Q 015370 260 SDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS------------------------ITQRQWITYDFLIILYAGLGNK 315 (408)
Q Consensus 260 ~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~------------------------~~~~~~~~~~~li~~~~~~~~~ 315 (408)
..|..+..+|++.|++++|.+ .+.+.... ....+...+..++..|.+.|.+
T Consensus 1222 ----~ny~rLA~tLvkLge~q~AIE-aarKA~n~~aWkev~~acve~~Ef~LA~~cgl~Iiv~~deLeeli~yYe~~G~f 1296 (1630)
T 1xi4_A 1222 ----SNFGRLASTLVHLGEYQAAVD-GARKANSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYF 1296 (1630)
T ss_pred ----hHHHHHHHHHHHhCCHHHHHH-HHHHhCCHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCHHHHHHHHHHHHHcCCH
Confidence 246666677777777776666 44433110 0111223344556666666777
Q ss_pred HHHHHHHHHHHhccCCCChhhHHHHHHHHHh--cCCHHHHHHHHHHHHhhCCCCC------CHHHHHHHHHHHHhcCChH
Q 015370 316 DKIDQIWKSLRMTKQKMTSRNYICILSSYLM--LGHLKEVGEIIDQWKQSATSDF------DISACNRLLGAFSDVGLTE 387 (408)
Q Consensus 316 ~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~--~g~~~~A~~~~~~~~~~~~~~~------~~~~~~~li~~~~~~g~~~ 387 (408)
++|+.+++.-.... +-....|+-+...|++ -++..++.++|..- ..++| +...|..++-.|.+.|+++
T Consensus 1297 eEAI~LlE~aL~Le-raH~gmftELaiLyaKy~peklmEhlk~f~~r---ini~k~~r~~e~~~lW~elv~LY~~~~e~d 1372 (1630)
T 1xi4_A 1297 EELITMLEAALGLE-RAHMGMFTELAILYSKFKPQKMREHLELFWSR---VNIPKVLRAAEQAHLWAELVFLYDKYEEYD 1372 (1630)
T ss_pred HHHHHHHHHHhccC-hhHhHHHHHHHHHHHhCCHHHHHHHHHHHHHh---cccchHhHHHHHHHHHHHHHHHHHhcccHH
Confidence 77777665443222 1122234444444443 33444444444432 11222 4556888888888888888
Q ss_pred HHHH
Q 015370 388 KANE 391 (408)
Q Consensus 388 ~a~~ 391 (408)
.|..
T Consensus 1373 nA~~ 1376 (1630)
T 1xi4_A 1373 NAII 1376 (1630)
T ss_pred HHHH
Confidence 8773
No 69
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.47 E-value=5e-13 Score=117.28 Aligned_cols=239 Identities=12% Similarity=0.056 Sum_probs=116.6
Q ss_pred ChhhHHHHHHHHHhcccHHHHHHHHHHHHhcc------CCCCChHHHHHHHHHHHhhcChHHHHHHHhcCCCC-------
Q 015370 87 TVSELRHILKELRKSQRYKHALEISEWMVTHK------EFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLS------- 153 (408)
Q Consensus 87 ~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~------~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~------- 153 (408)
+..++..+...+...|++++|+.+|+++.+.. ........+..+...+...|++++|...|++....
T Consensus 26 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 105 (311)
T 3nf1_A 26 RLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGK 105 (311)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCC
Confidence 45667777778888888888888888776520 01222345556666666666666666665543321
Q ss_pred --CCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhC------CC-CCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhC---
Q 015370 154 --AKTSETYTALLHLYAGAKWTEKAEELFERVKQS------NL-SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK--- 221 (408)
Q Consensus 154 --~~~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~------~~-~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~--- 221 (408)
.....++..+...|...|++++|.+.|++..+. +- +....++..+...+...|++++|...++++...
T Consensus 106 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~ 185 (311)
T 3nf1_A 106 DHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQT 185 (311)
T ss_dssp TCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 112344555555555555555555555554432 11 112234444445555555555555555444432
Q ss_pred ---CCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcc---
Q 015370 222 ---NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT--- 295 (408)
Q Consensus 222 ---g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~--- 295 (408)
+..| ....++..+...|...|++++|.. .+.++.....
T Consensus 186 ~~~~~~~-----------------------------------~~~~~~~~la~~~~~~g~~~~A~~-~~~~al~~~~~~~ 229 (311)
T 3nf1_A 186 KLGPDDP-----------------------------------NVAKTKNNLASCYLKQGKFKQAET-LYKEILTRAHERE 229 (311)
T ss_dssp TSCTTCH-----------------------------------HHHHHHHHHHHHHHHHTCHHHHHH-HHHHHHHHHHHHH
T ss_pred HhCCCCH-----------------------------------HHHHHHHHHHHHHHHcCCHHHHHH-HHHHHHHHHHHhc
Confidence 1111 122234444455555555555555 4444433211
Q ss_pred -----cCccc------hHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 015370 296 -----QRQWI------TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ 362 (408)
Q Consensus 296 -----~~~~~------~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~ 362 (408)
..... .+..+...+...+.+.++...+....... ..+..++..+...|.+.|++++|..+|++..+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~-~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 306 (311)
T 3nf1_A 230 FGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDS-PTVTTTLKNLGALYRRQGKFEAAETLEEAAMR 306 (311)
T ss_dssp HC------CCHHHHHHHHHHC-------CCSCCCC---------C-HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCC-chHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 01111 12222333344455555666666554332 12445677788888888888888888888765
No 70
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.43 E-value=7.5e-11 Score=106.83 Aligned_cols=309 Identities=10% Similarity=-0.036 Sum_probs=209.1
Q ss_pred CCChhhHHHHHHHH--HhcccHHHHHHHHHHHHhcc-CCCCChH--HHHHHHHH--HHhhcChHHHH---------HHHh
Q 015370 85 QATVSELRHILKEL--RKSQRYKHALEISEWMVTHK-EFVLSDS--DYATRIDL--MTKVFGIHSGE---------RYFE 148 (408)
Q Consensus 85 ~~~~~~~~~li~~~--~~~~~~~~a~~~~~~~~~~~-~~~~~~~--~~~~li~~--~~~~g~~~~a~---------~~~~ 148 (408)
.|+..+-+.+-..| ...+++++|.++++.+.+.. ....|.. .|-.++.. ....+.++.+. ..++
T Consensus 7 ~~~~~v~~~l~~wy~~i~~~~~~~A~~l~~~i~~~~~~~~~~~~~~~yy~l~~~r~~~~~~~~~~~~~~~~~~~~~~~l~ 86 (378)
T 3q15_A 7 IPSSRVGVKINEWYKMIRQFSVPDAEILKAEVEQDIQQMEEDQDLLIYYSLMCFRHQLMLDYLEPGKTYGNRPTVTELLE 86 (378)
T ss_dssp BCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHGGGBCCCHHHHHHHHHHHHHHHHHHHTCCC--------CHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcCcccccccccchHHHHH
Confidence 34444444455555 78899999999999886632 1223332 23333322 11223333333 4444
Q ss_pred cCCCCC-C-C----HHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCC-CC----ChhhHHHHHHHHHhcCCHHHHHHHHHH
Q 015370 149 GLPLSA-K-T----SETYTALLHLYAGAKWTEKAEELFERVKQSNL-SF----NALMYNEMMTLYMSVGQVEKVALVVEE 217 (408)
Q Consensus 149 ~~~~~~-~-~----~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~-~p----~~~~~~~li~~~~~~g~~~~a~~~~~~ 217 (408)
.+.... + + ...|......+...|++++|...|++..+.-- .+ ...++..+...|...|++++|...+++
T Consensus 87 ~i~~~~~~~~~~l~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~ 166 (378)
T 3q15_A 87 TIETPQKKLTGLLKYYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQ 166 (378)
T ss_dssp HHHGGGHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHhccCCCCccHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHH
Confidence 443221 1 1 11234445667889999999999999876421 11 345788999999999999999999988
Q ss_pred HHhC----CC-CC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCC---CCC-CCHHHHHHHHHHHHHcCchhhhHHHHH
Q 015370 218 IKRK----NV-VP-DIFTYNLWISSCAATLNIDQVKKFLDEMSCDS---GGS-DDWVKYVNLVNIYITASHLVNAESSTL 287 (408)
Q Consensus 218 m~~~----g~-~p-~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~---~~~-~~~~~~~~li~~~~~~~~~~~a~~~~~ 287 (408)
..+. +- .+ ...+++.+..+|...|++++|.+.+++..+.. +.+ ....++..+...|...|++++|.. .+
T Consensus 167 al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~-~~ 245 (378)
T 3q15_A 167 ALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVE-HF 245 (378)
T ss_dssp HHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHH-HH
T ss_pred HHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHH-HH
Confidence 7642 11 11 24577888889999999999999998876521 111 123468889999999999999999 88
Q ss_pred HHHHH-----hcccCccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCC----hhhHHHHHHHHHhcCC---HHHHHH
Q 015370 288 VEAEK-----SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT----SRNYICILSSYLMLGH---LKEVGE 355 (408)
Q Consensus 288 ~~~~~-----~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~----~~~~~~li~~~~~~g~---~~~A~~ 355 (408)
.+... ..+. ...++..+...+.+.|++++|...+++..+.....+ ...+..+...+...++ +++|..
T Consensus 246 ~~al~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~ly~~~~~~~~~~~al~ 324 (378)
T 3q15_A 246 QKAAKVSREKVPDL-LPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKELFLFLQAVYKETVDERKIHDLLS 324 (378)
T ss_dssp HHHHHHHHHHCGGG-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTCCSCHHHHHHHHHHHHSSSCCHHHHHHHHH
T ss_pred HHHHHHHHhhCChh-HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 88776 3333 367888899999999999999999998776533211 2234455566667788 788888
Q ss_pred HHHHHHhhCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHh
Q 015370 356 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398 (408)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~ 398 (408)
++++. +..+.....+..+...|...|++++|...|++..+
T Consensus 325 ~~~~~---~~~~~~~~~~~~la~~y~~~g~~~~A~~~~~~al~ 364 (378)
T 3q15_A 325 YFEKK---NLHAYIEACARSAAAVFESSCHFEQAAAFYRKVLK 364 (378)
T ss_dssp HHHHT---TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHhC---CChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 87763 21222334677889999999999999999998765
No 71
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.42 E-value=7.3e-11 Score=94.76 Aligned_cols=165 Identities=10% Similarity=-0.044 Sum_probs=120.7
Q ss_pred HHHHHHHHHHHhhcChHHHHHHHhcCCCCC-CCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHH
Q 015370 125 SDYATRIDLMTKVFGIHSGERYFEGLPLSA-KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM 203 (408)
Q Consensus 125 ~~~~~li~~~~~~g~~~~a~~~~~~~~~~~-~~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~ 203 (408)
..+..+...+...|++++|...|+++.... .+..++..+...+...|++++|...++++.+.. +.+..++..+...+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~a~~~~ 87 (186)
T 3as5_A 9 VYYRDKGISHAKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLADA-PDNVKVATVLGLTYV 87 (186)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHTTTCCTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHH
Confidence 456666777788888888888888877663 457778888888888888888888888877653 446677777888888
Q ss_pred hcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhH
Q 015370 204 SVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAE 283 (408)
Q Consensus 204 ~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~ 283 (408)
..|++++|.+.++++..... .+...+..+...+...|++++|..+++++.+. .+.+...+..+...+...|++++|.
T Consensus 88 ~~~~~~~A~~~~~~~~~~~~-~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~--~~~~~~~~~~la~~~~~~~~~~~A~ 164 (186)
T 3as5_A 88 QVQKYDLAVPLLIKVAEANP-INFNVRFRLGVALDNLGRFDEAIDSFKIALGL--RPNEGKVHRAIAFSYEQMGRHEEAL 164 (186)
T ss_dssp HHTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HhcCHHHHHHHHHHHHhcCc-HhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhc--CccchHHHHHHHHHHHHcCCHHHHH
Confidence 88888888888887776532 35666777777777788888888888777663 2445666777777777777777777
Q ss_pred HHHHHHHHHhc
Q 015370 284 SSTLVEAEKSI 294 (408)
Q Consensus 284 ~~~~~~~~~~~ 294 (408)
. .+....+..
T Consensus 165 ~-~~~~~~~~~ 174 (186)
T 3as5_A 165 P-HFKKANELD 174 (186)
T ss_dssp H-HHHHHHHHH
T ss_pred H-HHHHHHHcC
Confidence 7 666665543
No 72
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=99.40 E-value=9e-11 Score=108.80 Aligned_cols=94 Identities=15% Similarity=0.009 Sum_probs=35.4
Q ss_pred CCCCcHHHHHHHHHHcCCCCChhhHHHHHHHHHhcccH---HHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhc-----
Q 015370 67 LPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRY---KHALEISEWMVTHKEFVLSDSDYATRIDLMTKVF----- 138 (408)
Q Consensus 67 ~~~~~a~~~l~~~~~~g~~~~~~~~~~li~~~~~~~~~---~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g----- 138 (408)
.+.+.|.+.++...+.|. ...+..+...+...|+. ++|++.|++..+. ++..+..+...+...+
T Consensus 17 g~~~~A~~~~~~aa~~g~---~~A~~~Lg~~y~~~g~~~d~~~A~~~~~~A~~~-----~~~A~~~Lg~~~~~~~~~~~~ 88 (452)
T 3e4b_A 17 GDTVTAQQNYQQLAELGY---SEAQVGLADIQVGTRDPAQIKQAEATYRAAADT-----SPRAQARLGRLLAAKPGATEA 88 (452)
T ss_dssp HHHHHHHHHHHHHHHHTC---CTGGGTCC---------------------------------CHHHHHHHHHTC--CCHH
T ss_pred CCHHHHHHHHHHHHHCCC---HHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhC-----CHHHHHHHHHHHHhCCCCCCc
Confidence 345566777777666653 33334455555556666 6777777766532 4455555555444433
Q ss_pred ChHHHHHHHhcCCCCCCCHHHHHHHHHHHHc
Q 015370 139 GIHSGERYFEGLPLSAKTSETYTALLHLYAG 169 (408)
Q Consensus 139 ~~~~a~~~~~~~~~~~~~~~~~~~ll~~~~~ 169 (408)
++++|..+|++....+ +...+..|...|..
T Consensus 89 ~~~~A~~~~~~Aa~~g-~~~A~~~Lg~~y~~ 118 (452)
T 3e4b_A 89 EHHEAESLLKKAFANG-EGNTLIPLAMLYLQ 118 (452)
T ss_dssp HHHHHHHHHHHHHHTT-CSSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCC-CHHHHHHHHHHHHh
Confidence 5667777777654432 12244444444443
No 73
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.38 E-value=1.2e-10 Score=93.45 Aligned_cols=165 Identities=11% Similarity=-0.018 Sum_probs=106.3
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHH
Q 015370 228 FTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLII 307 (408)
Q Consensus 228 ~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~ 307 (408)
..+..+...+...|++++|...++++.+. .+.+...+..+...+...|++++|.. .+..+.+..+ .+...+..+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~A~~-~~~~~~~~~~-~~~~~~~~~a~ 84 (186)
T 3as5_A 9 VYYRDKGISHAKAGRYSQAVMLLEQVYDA--DAFDVDVALHLGIAYVKTGAVDRGTE-LLERSLADAP-DNVKVATVLGL 84 (186)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHTTTCCT--TSCCHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHHCT-TCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHh--CccChHHHHHHHHHHHHcCCHHHHHH-HHHHHHhcCC-CCHHHHHHHHH
Confidence 34445555666666666666666666552 23455566666666666677776666 6665554432 24556666666
Q ss_pred HHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHhcCChH
Q 015370 308 LYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 387 (408)
Q Consensus 308 ~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~ 387 (408)
.+...|++++|.+.+++...... .+...+..+...+...|++++|..++++..+.. +.+...+..+...+...|+++
T Consensus 85 ~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~--~~~~~~~~~la~~~~~~~~~~ 161 (186)
T 3as5_A 85 TYVQVQKYDLAVPLLIKVAEANP-INFNVRFRLGVALDNLGRFDEAIDSFKIALGLR--PNEGKVHRAIAFSYEQMGRHE 161 (186)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHhcCHHHHHHHHHHHHhcCc-HhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcC--ccchHHHHHHHHHHHHcCCHH
Confidence 67777777777777776665532 245556667777777777777777777777654 345667777777777777777
Q ss_pred HHHHHHHHHHhc
Q 015370 388 KANEFHMLLLQK 399 (408)
Q Consensus 388 ~a~~~~~~m~~~ 399 (408)
+|...++++.+.
T Consensus 162 ~A~~~~~~~~~~ 173 (186)
T 3as5_A 162 EALPHFKKANEL 173 (186)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc
Confidence 777777777653
No 74
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.38 E-value=3.2e-10 Score=102.35 Aligned_cols=268 Identities=9% Similarity=-0.016 Sum_probs=188.2
Q ss_pred HHHHHHHhcccHHHHHHHHHHHHhccCCCCChH----HHHHHHHHHHhhcChHHHHHHHhcCCCC---CCC----HHHHH
Q 015370 93 HILKELRKSQRYKHALEISEWMVTHKEFVLSDS----DYATRIDLMTKVFGIHSGERYFEGLPLS---AKT----SETYT 161 (408)
Q Consensus 93 ~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~----~~~~li~~~~~~g~~~~a~~~~~~~~~~---~~~----~~~~~ 161 (408)
.....+...|++++|...+++..... ...+.. .++.+...+...|++++|.+.+++.... ..+ ..++.
T Consensus 19 ~~a~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 97 (373)
T 1hz4_A 19 LRAQVAINDGNPDEAERLAKLALEEL-PPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLI 97 (373)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTC-CTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHcC-CCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 34456677899999999999988753 122222 4566778888999999999988875543 122 34467
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHhC----CCC--C-ChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCC--C--CHHHH
Q 015370 162 ALLHLYAGAKWTEKAEELFERVKQS----NLS--F-NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVV--P--DIFTY 230 (408)
Q Consensus 162 ~ll~~~~~~~~~~~A~~~~~~m~~~----~~~--p-~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~--p--~~~~~ 230 (408)
.+...+...|++++|...+++.... +.+ | ...++..+...+...|++++|...+++....... + ...++
T Consensus 98 ~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 177 (373)
T 1hz4_A 98 QQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCL 177 (373)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHH
Confidence 7888899999999999999887652 221 2 2446777888899999999999999988753221 1 24567
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCC-HHHHH----HHHHHHHHcCchhhhHHHHHHHHHHhcccCc---cchH
Q 015370 231 NLWISSCAATLNIDQVKKFLDEMSCDSGGSDD-WVKYV----NLVNIYITASHLVNAESSTLVEAEKSITQRQ---WITY 302 (408)
Q Consensus 231 ~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~-~~~~~----~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~---~~~~ 302 (408)
..+...+...|++++|...+++.......... ..... ..+..+...|++++|.. .+.........+. ...+
T Consensus 178 ~~la~~~~~~g~~~~A~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~-~~~~a~~~~~~~~~~~~~~~ 256 (373)
T 1hz4_A 178 AMLIQCSLARGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAAN-WLRHTAKPEFANNHFLQGQW 256 (373)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHH-HHHHSCCCCCTTCGGGHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHCCCHHHHHH-HHHhCCCCCCCcchhhHHHH
Confidence 77888899999999999999987642111111 11111 23345779999999999 7776654332211 2245
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhccCC----CCh-hhHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 015370 303 DFLIILYAGLGNKDKIDQIWKSLRMTKQK----MTS-RNYICILSSYLMLGHLKEVGEIIDQWKQ 362 (408)
Q Consensus 303 ~~li~~~~~~~~~~~a~~~~~~m~~~~~~----p~~-~~~~~li~~~~~~g~~~~A~~~~~~~~~ 362 (408)
..+...+...|++++|...+++....... ++. ..+..+..++...|+.++|...+++...
T Consensus 257 ~~la~~~~~~g~~~~A~~~l~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~al~ 321 (373)
T 1hz4_A 257 RNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQAGRKSDAQRVLLDALK 321 (373)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 67788889999999999999887544221 122 2455677788899999999999998765
No 75
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.38 E-value=1.6e-11 Score=111.38 Aligned_cols=289 Identities=9% Similarity=-0.066 Sum_probs=201.8
Q ss_pred CCCCcHHHHHHHHHHcC--CCCCh--hhHHHHHHHH--HhcccHHHHH-----------HHHHHHHhccCCCCChHH---
Q 015370 67 LPKRSATNVIQRWVSEG--NQATV--SELRHILKEL--RKSQRYKHAL-----------EISEWMVTHKEFVLSDSD--- 126 (408)
Q Consensus 67 ~~~~~a~~~l~~~~~~g--~~~~~--~~~~~li~~~--~~~~~~~~a~-----------~~~~~~~~~~~~~~~~~~--- 126 (408)
.+.+.|..++++..+.- ...+. ..|..++..- ...+.++.+. +.++.+.... .+...
T Consensus 26 ~~~~~A~~l~~~i~~~~~~~~~~~~~~~y~~ll~~r~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~---~~~~~~l~ 102 (383)
T 3ulq_A 26 FSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPRLSDLLLEIDKKQ---ARLTGLLE 102 (383)
T ss_dssp TCHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHGGGGGSCGGGSCCHHHHHHHHHHHT---HHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHhhcCcccccccccccchhhHHHHHHhcC---CCchhHHH
Confidence 45567777777766542 22333 3334444322 1224444444 6677665432 11122
Q ss_pred ---HHHHHHHHHhhcChHHHHHHHhcCCCC---CC----CHHHHHHHHHHHHcCCCHHHHHHHHHHHHhC----C--CCC
Q 015370 127 ---YATRIDLMTKVFGIHSGERYFEGLPLS---AK----TSETYTALLHLYAGAKWTEKAEELFERVKQS----N--LSF 190 (408)
Q Consensus 127 ---~~~li~~~~~~g~~~~a~~~~~~~~~~---~~----~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~----~--~~p 190 (408)
+-.....+...|++++|...|++.... .+ ...+|..+...|...|++++|...+++..+. + .+.
T Consensus 103 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~ 182 (383)
T 3ulq_A 103 YYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIR 182 (383)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHH
Confidence 223566778899999999999986553 12 3578999999999999999999999987653 1 011
Q ss_pred ChhhHHHHHHHHHhcCCHHHHHHHHHHHHhC----CCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHhcC---CCC-CC
Q 015370 191 NALMYNEMMTLYMSVGQVEKVALVVEEIKRK----NVVP-DIFTYNLWISSCAATLNIDQVKKFLDEMSCD---SGG-SD 261 (408)
Q Consensus 191 ~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~----g~~p-~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~---~~~-~~ 261 (408)
...+++.+...|...|++++|...|++..+. +-.+ ...++..+...|...|++++|...+++..+. .+. +.
T Consensus 183 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~ 262 (383)
T 3ulq_A 183 LLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPS 262 (383)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGG
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchh
Confidence 2457899999999999999999999887643 1111 1247888899999999999999999987761 122 34
Q ss_pred CHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhccc----CccchHHHHHHHHHhcCC---HHHHHHHHHHHHhccCCC-C
Q 015370 262 DWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ----RQWITYDFLIILYAGLGN---KDKIDQIWKSLRMTKQKM-T 333 (408)
Q Consensus 262 ~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~----~~~~~~~~li~~~~~~~~---~~~a~~~~~~m~~~~~~p-~ 333 (408)
...++..+...|.+.|++++|.. .+.+....... .....+..+...+...|+ +++|+.++++. +..| .
T Consensus 263 ~~~~~~~l~~~~~~~g~~~~A~~-~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~---~~~~~~ 338 (383)
T 3ulq_A 263 LPQAYFLITQIHYKLGKIDKAHE-YHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAIQGFFDFLESK---MLYADL 338 (383)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHHHHHHTCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHT---TCHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHC---cCHHHH
Confidence 46678999999999999999999 88777654321 122335677778888898 77777777654 3233 2
Q ss_pred hhhHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 015370 334 SRNYICILSSYLMLGHLKEVGEIIDQWKQ 362 (408)
Q Consensus 334 ~~~~~~li~~~~~~g~~~~A~~~~~~~~~ 362 (408)
...+..+...|...|++++|...+++..+
T Consensus 339 ~~~~~~la~~y~~~g~~~~A~~~~~~al~ 367 (383)
T 3ulq_A 339 EDFAIDVAKYYHERKNFQKASAYFLKVEQ 367 (383)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 34566788999999999999999998865
No 76
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.36 E-value=3.3e-10 Score=102.29 Aligned_cols=271 Identities=12% Similarity=0.059 Sum_probs=191.7
Q ss_pred HHHHHHHHHhhcChHHHHHHHhcCCCCC--CCH----HHHHHHHHHHHcCCCHHHHHHHHHHHHhC----CCC-CChhhH
Q 015370 127 YATRIDLMTKVFGIHSGERYFEGLPLSA--KTS----ETYTALLHLYAGAKWTEKAEELFERVKQS----NLS-FNALMY 195 (408)
Q Consensus 127 ~~~li~~~~~~g~~~~a~~~~~~~~~~~--~~~----~~~~~ll~~~~~~~~~~~A~~~~~~m~~~----~~~-p~~~~~ 195 (408)
.......+...|++++|...+++..... .+. .+++.+...+...|++++|.+.+++.... |.. ....++
T Consensus 17 ~~~~a~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 96 (373)
T 1hz4_A 17 NALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSL 96 (373)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 3344456678899999999987643331 222 35677788899999999999999987652 210 012346
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhC----CCC--CC-HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCC---CCCCCHHH
Q 015370 196 NEMMTLYMSVGQVEKVALVVEEIKRK----NVV--PD-IFTYNLWISSCAATLNIDQVKKFLDEMSCDS---GGSDDWVK 265 (408)
Q Consensus 196 ~~li~~~~~~g~~~~a~~~~~~m~~~----g~~--p~-~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~---~~~~~~~~ 265 (408)
..+...+...|++++|...+++.... +.. |. ..++..+...+...|++++|...+++..... +.+.....
T Consensus 97 ~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 176 (373)
T 1hz4_A 97 IQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQC 176 (373)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHH
Confidence 77888899999999999999887642 222 32 3456667888999999999999999876521 11112356
Q ss_pred HHHHHHHHHHcCchhhhHHHHHHHHHHhcccCcc-chHH-----HHHHHHHhcCCHHHHHHHHHHHHhccCCCC---hhh
Q 015370 266 YVNLVNIYITASHLVNAESSTLVEAEKSITQRQW-ITYD-----FLIILYAGLGNKDKIDQIWKSLRMTKQKMT---SRN 336 (408)
Q Consensus 266 ~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~-----~li~~~~~~~~~~~a~~~~~~m~~~~~~p~---~~~ 336 (408)
+..+...+...|++++|.. .+.+.......++. ..+. ..+..+...|++++|...+++.......++ ...
T Consensus 177 ~~~la~~~~~~g~~~~A~~-~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~ 255 (373)
T 1hz4_A 177 LAMLIQCSLARGDLDNARS-QLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQ 255 (373)
T ss_dssp HHHHHHHHHHHTCHHHHHH-HHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHSCCCCCTTCGGGHHH
T ss_pred HHHHHHHHHHcCCHHHHHH-HHHHHHHHHhccCcchhHHHHHHHHHHHHHHHCCCHHHHHHHHHhCCCCCCCcchhhHHH
Confidence 7888999999999999999 88887665333322 1222 233447789999999999998765432211 224
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhCC---CCCCH-HHHHHHHHHHHhcCChHHHHHHHHHHHh
Q 015370 337 YICILSSYLMLGHLKEVGEIIDQWKQSAT---SDFDI-SACNRLLGAFSDVGLTEKANEFHMLLLQ 398 (408)
Q Consensus 337 ~~~li~~~~~~g~~~~A~~~~~~~~~~~~---~~~~~-~~~~~li~~~~~~g~~~~a~~~~~~m~~ 398 (408)
+..+...+...|++++|...+++...... ..++. ..+..+..++...|+.++|...+++..+
T Consensus 256 ~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~al~ 321 (373)
T 1hz4_A 256 WRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQAGRKSDAQRVLLDALK 321 (373)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 56678889999999999999998765321 11122 3666678888999999999999988764
No 77
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=99.33 E-value=3.5e-10 Score=104.82 Aligned_cols=188 Identities=12% Similarity=0.042 Sum_probs=85.3
Q ss_pred HHHHHHHHHHcCC---CHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhc----CCHHHHHHHHHHHHhCCCCCCHHHHH
Q 015370 159 TYTALLHLYAGAK---WTEKAEELFERVKQSNLSFNALMYNEMMTLYMSV----GQVEKVALVVEEIKRKNVVPDIFTYN 231 (408)
Q Consensus 159 ~~~~ll~~~~~~~---~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~----g~~~~a~~~~~~m~~~g~~p~~~~~~ 231 (408)
.+..|...|.+.| +.++|++.|++..+.| +++...+..+...|... +++++|...|+... .| +...+.
T Consensus 178 a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g-~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa-~g---~~~a~~ 252 (452)
T 3e4b_A 178 CYVELATVYQKKQQPEQQAELLKQMEAGVSRG-TVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA-PG---YPASWV 252 (452)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTT-CSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG-GG---STHHHH
T ss_pred HHHHHHHHHHHcCCcccHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc-CC---CHHHHH
Confidence 4455555555555 5555555555555554 23333334444444332 45555555555544 22 223333
Q ss_pred HHHHH-H--HhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcC-----chhhhHHHHHHHHHHhcccCccchHH
Q 015370 232 LWISS-C--AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS-----HLVNAESSTLVEAEKSITQRQWITYD 303 (408)
Q Consensus 232 ~ll~~-~--~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~-----~~~~a~~~~~~~~~~~~~~~~~~~~~ 303 (408)
.+... + ...+++++|.+.|++..+. | +...+..|...|. .| ++++|.. .+.+.. +.+...+.
T Consensus 253 ~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~-g---~~~A~~~Lg~~y~-~G~g~~~d~~~A~~-~~~~Aa----~g~~~A~~ 322 (452)
T 3e4b_A 253 SLAQLLYDFPELGDVEQMMKYLDNGRAA-D---QPRAELLLGKLYY-EGKWVPADAKAAEA-HFEKAV----GREVAADY 322 (452)
T ss_dssp HHHHHHHHSGGGCCHHHHHHHHHHHHHT-T---CHHHHHHHHHHHH-HCSSSCCCHHHHHH-HHHTTT----TTCHHHHH
T ss_pred HHHHHHHhCCCCCCHHHHHHHHHHHHHC-C---CHHHHHHHHHHHH-cCCCCCCCHHHHHH-HHHHHh----CCCHHHHH
Confidence 33333 2 2345555555555555542 2 3444444444444 22 5555555 444333 22334444
Q ss_pred HHHHHHHh----cCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHh----cCCHHHHHHHHHHHHhhC
Q 015370 304 FLIILYAG----LGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLM----LGHLKEVGEIIDQWKQSA 364 (408)
Q Consensus 304 ~li~~~~~----~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~----~g~~~~A~~~~~~~~~~~ 364 (408)
.|...|.. ..+.++|...|++..+.| +......|...|.. ..+.++|..+|+...+.|
T Consensus 323 ~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g---~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~A~~~g 388 (452)
T 3e4b_A 323 YLGQIYRRGYLGKVYPQKALDHLLTAARNG---QNSADFAIAQLFSQGKGTKPDPLNAYVFSQLAKAQD 388 (452)
T ss_dssp HHHHHHHTTTTSSCCHHHHHHHHHHHHTTT---CTTHHHHHHHHHHSCTTBCCCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHCCCCCCcCHHHHHHHHHHHHhhC---hHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHCC
Confidence 44444443 225555555555544433 12233333333332 235555555555555443
No 78
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.32 E-value=1e-10 Score=113.83 Aligned_cols=163 Identities=12% Similarity=0.015 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHH
Q 015370 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 236 (408)
Q Consensus 157 ~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~ 236 (408)
..+|+.|...|.+.|++++|++.|++.++.. +-+..+|+.+..+|.+.|++++|+..|++..+.... +..+|..+..+
T Consensus 9 a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~-P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~-~~~a~~nLg~~ 86 (723)
T 4gyw_A 9 ADSLNNLANIKREQGNIEEAVRLYRKALEVF-PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT-FADAYSNMGNT 86 (723)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHH
Confidence 4445555555555555555555555554432 223445555555555555555555555555443211 34445555555
Q ss_pred HHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCHH
Q 015370 237 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKD 316 (408)
Q Consensus 237 ~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~ 316 (408)
+...|++++|++.|++..+. .+.+...|+.+..+|.+.|++++|+. .+++..+..+. +...|..+...+...|+++
T Consensus 87 l~~~g~~~~A~~~~~kAl~l--~P~~~~a~~~Lg~~~~~~g~~~eAi~-~~~~Al~l~P~-~~~a~~~L~~~l~~~g~~~ 162 (723)
T 4gyw_A 87 LKEMQDVQGALQCYTRAIQI--NPAFADAHSNLASIHKDSGNIPEAIA-SYRTALKLKPD-FPDAYCNLAHCLQIVCDWT 162 (723)
T ss_dssp HHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHHCSC-CHHHHHHHHHHHHHTTCCT
T ss_pred HHHcCCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHcCCHHHHHH-HHHHHHHhCCC-ChHHHhhhhhHHHhcccHH
Confidence 55555555555555555441 22344445555555555555555555 45544443322 3444555555555555555
Q ss_pred HHHHHHHHH
Q 015370 317 KIDQIWKSL 325 (408)
Q Consensus 317 ~a~~~~~~m 325 (408)
+|.+.+++.
T Consensus 163 ~A~~~~~ka 171 (723)
T 4gyw_A 163 DYDERMKKL 171 (723)
T ss_dssp THHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555555443
No 79
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.31 E-value=4.8e-11 Score=102.86 Aligned_cols=205 Identities=13% Similarity=0.019 Sum_probs=116.7
Q ss_pred ChhhHHHHHHHHHhcCCHHHHHHHHHHHHhC------CCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHhcC------C
Q 015370 191 NALMYNEMMTLYMSVGQVEKVALVVEEIKRK------NVVP-DIFTYNLWISSCAATLNIDQVKKFLDEMSCD------S 257 (408)
Q Consensus 191 ~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~------g~~p-~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~------~ 257 (408)
...++..+...|...|++++|...+++.... +-.| ...++..+...+...|++++|...+++..+. .
T Consensus 42 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 121 (283)
T 3edt_B 42 VATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGK 121 (283)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCC
Confidence 3456666666677777777777776666543 1112 2345666666677777777777776665542 0
Q ss_pred CCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhc-------ccCccchHHHHHHHHHhcCCHHHHHHHHHHHHhcc-
Q 015370 258 GGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI-------TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK- 329 (408)
Q Consensus 258 ~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~-------~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~- 329 (408)
..+.....+..+...|...|++++|.. .+.+..+.. .+....++..+...|...|++++|.+.+++..+..
T Consensus 122 ~~~~~~~~~~~la~~~~~~g~~~~A~~-~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~ 200 (283)
T 3edt_B 122 FHPDVAKQLNNLALLCQNQGKAEEVEY-YYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAH 200 (283)
T ss_dssp TCHHHHHHHHHHHHHHHTTTCHHHHHH-HHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHcCCHHHHHH-HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 112334556677777777777777777 666655431 11234566777777788888888888887765431
Q ss_pred ------CCCChhh-HHHHHHHHHhcCC------HHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 015370 330 ------QKMTSRN-YICILSSYLMLGH------LKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 396 (408)
Q Consensus 330 ------~~p~~~~-~~~li~~~~~~g~------~~~A~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m 396 (408)
..+.... +..+...+...+. +..+...++..... .+....++..+...|...|++++|..++++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 278 (283)
T 3edt_B 201 EKEFGSVNGDNKPIWMHAEEREESKDKRRDSAPYGEYGSWYKACKVD--SPTVNTTLRSLGALYRRQGKLEAAHTLEDCA 278 (283)
T ss_dssp HHHSSSCCSSCCCHHHHHHHHHHTTCCCCC------------CCCCC--CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HhcCCCcchhHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhcCCC--CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 1222222 2233333332222 22333333322111 1123456788888999999999999999887
Q ss_pred Hh
Q 015370 397 LQ 398 (408)
Q Consensus 397 ~~ 398 (408)
++
T Consensus 279 l~ 280 (283)
T 3edt_B 279 SR 280 (283)
T ss_dssp HT
T ss_pred HH
Confidence 75
No 80
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.30 E-value=1.9e-10 Score=111.93 Aligned_cols=166 Identities=10% Similarity=-0.021 Sum_probs=99.9
Q ss_pred ChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHH
Q 015370 191 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 270 (408)
Q Consensus 191 ~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li 270 (408)
+..+|+.|...|.+.|++++|++.|++..+.... +..++..+..+|.+.|++++|++.|++..+. .+.+...|..+.
T Consensus 8 ~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~-~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l--~P~~~~a~~nLg 84 (723)
T 4gyw_A 8 HADSLNNLANIKREQGNIEEAVRLYRKALEVFPE-FAAAHSNLASVLQQQGKLQEALMHYKEAIRI--SPTFADAYSNMG 84 (723)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCCHHHHHHHH
Confidence 3556677777777777777777777766664322 3556666666666677777777776666652 234455666666
Q ss_pred HHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCH
Q 015370 271 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 350 (408)
Q Consensus 271 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~ 350 (408)
.+|.+.|++++|++ .+++..+..+. +...|+.+...|...|++++|++.|++..+.... +...+..+..++...|++
T Consensus 85 ~~l~~~g~~~~A~~-~~~kAl~l~P~-~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~-~~~a~~~L~~~l~~~g~~ 161 (723)
T 4gyw_A 85 NTLKEMQDVQGALQ-CYTRAIQINPA-FADAHSNLASIHKDSGNIPEAIASYRTALKLKPD-FPDAYCNLAHCLQIVCDW 161 (723)
T ss_dssp HHHHHTTCHHHHHH-HHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCC
T ss_pred HHHHHcCCHHHHHH-HHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-ChHHHhhhhhHHHhcccH
Confidence 66666666666666 56555544322 4555666666666666666666666655554221 344455566666666666
Q ss_pred HHHHHHHHHHHh
Q 015370 351 KEVGEIIDQWKQ 362 (408)
Q Consensus 351 ~~A~~~~~~~~~ 362 (408)
++|.+.+++..+
T Consensus 162 ~~A~~~~~kal~ 173 (723)
T 4gyw_A 162 TDYDERMKKLVS 173 (723)
T ss_dssp TTHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 666666665544
No 81
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.28 E-value=1.3e-09 Score=90.95 Aligned_cols=198 Identities=11% Similarity=-0.021 Sum_probs=135.1
Q ss_pred CCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHH
Q 015370 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 234 (408)
Q Consensus 155 ~~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll 234 (408)
.|...+......+.+.|++++|...|++..+..-+++...+..+..++...|++++|...|++..+.... +...+..+.
T Consensus 5 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~ 83 (228)
T 4i17_A 5 TDPNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYN-LANAYIGKS 83 (228)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCS-HHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcc-hHHHHHHHH
Confidence 4567788888888888888888888888887653367777777888888888888888888888875432 556777788
Q ss_pred HHHHhcCCHHHHHHHHHHHhcCCCCCCCH-------HHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccC-ccchHHHHH
Q 015370 235 SSCAATLNIDQVKKFLDEMSCDSGGSDDW-------VKYVNLVNIYITASHLVNAESSTLVEAEKSITQR-QWITYDFLI 306 (408)
Q Consensus 235 ~~~~~~g~~~~a~~~~~~~~~~~~~~~~~-------~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~li 306 (408)
.++...|++++|...+++..+. .+.+. ..|..+...+.+.|++++|.. .+....+..+.. +...|..+.
T Consensus 84 ~~~~~~~~~~~A~~~~~~al~~--~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~-~~~~al~~~p~~~~~~~~~~l~ 160 (228)
T 4i17_A 84 AAYRDMKNNQEYIATLTEGIKA--VPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEE-NYKHATDVTSKKWKTDALYSLG 160 (228)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHH--STTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHH-HHHHHTTSSCHHHHHHHHHHHH
T ss_pred HHHHHcccHHHHHHHHHHHHHH--CCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHH-HHHHHHhcCCCcccHHHHHHHH
Confidence 8888888888888888888773 23344 457777777888888888888 777665542210 245566666
Q ss_pred HHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhhC
Q 015370 307 ILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364 (408)
Q Consensus 307 ~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~ 364 (408)
..|...| ..+++++...+. .+...|.... ....+.+++|...+++..+..
T Consensus 161 ~~~~~~~-----~~~~~~a~~~~~-~~~~~~~~~~--~~~~~~~~~A~~~~~~a~~l~ 210 (228)
T 4i17_A 161 VLFYNNG-----ADVLRKATPLAS-SNKEKYASEK--AKADAAFKKAVDYLGEAVTLS 210 (228)
T ss_dssp HHHHHHH-----HHHHHHHGGGTT-TCHHHHHHHH--HHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHH-----HHHHHHHHhccc-CCHHHHHHHH--HHHHHHHHHHHHHHHHHhhcC
Confidence 6665443 333444444331 2333333332 233456788888888887754
No 82
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=99.25 E-value=9e-08 Score=92.19 Aligned_cols=130 Identities=11% Similarity=0.114 Sum_probs=88.9
Q ss_pred CCcHHHHHHHHHHcCCCCChhhHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcC---hHHHHH
Q 015370 69 KRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFG---IHSGER 145 (408)
Q Consensus 69 ~~~a~~~l~~~~~~g~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~---~~~a~~ 145 (408)
+.+....++.-+..+ +-|...|..++..+.+.+.++.+..+|+.+... ++.+...|...+..-.+.++ ++.+.+
T Consensus 48 ~~d~i~~lE~~l~~n-p~d~~~W~~yi~~~~~~~~~~~aR~vyEraL~~--fP~~~~lW~~Yi~~E~~~~~~~~~~~v~~ 124 (679)
T 4e6h_A 48 ESDVIGKLNDMIEEQ-PTDIFLYVKLLKHHVSLKQWKQVYETFDKLHDR--FPLMANIWCMRLSLEFDKMEELDAAVIEP 124 (679)
T ss_dssp CSCHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHTC--CCCHHHHHH
T ss_pred CHHHHHHHHHHHHHC-cCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHhhCCcchHHHHHH
Confidence 344555566666553 568888999999888888899999999998886 46677778888888778888 888888
Q ss_pred HHhcCCCCC---CCHHHHHHHHHHHHcCCCH--------HHHHHHHHHHHh-CCC-CCC-hhhHHHHHHH
Q 015370 146 YFEGLPLSA---KTSETYTALLHLYAGAKWT--------EKAEELFERVKQ-SNL-SFN-ALMYNEMMTL 201 (408)
Q Consensus 146 ~~~~~~~~~---~~~~~~~~ll~~~~~~~~~--------~~A~~~~~~m~~-~~~-~p~-~~~~~~li~~ 201 (408)
+|++..... |++..|...+....+.++. +.+.++|+..+. .|. .|+ ...|...+..
T Consensus 125 lfeRal~~~~~~~sv~LW~~Yl~f~~~~~~~~~~~~~~r~~vr~~FErAl~~vG~~d~~s~~iW~~Yi~f 194 (679)
T 4e6h_A 125 VLARCLSKELGNNDLSLWLSYITYVRKKNDIITGGEEARNIVIQAFQVVVDKCAIFEPKSIQFWNEYLHF 194 (679)
T ss_dssp HHHHHTCSSSCCCCHHHHHHHHHHHHHHSCSTTTHHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhCcccccchHHHHHHHHH
Confidence 888877665 7888888877765554443 334466766443 344 333 3456555543
No 83
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.25 E-value=1.2e-09 Score=98.89 Aligned_cols=201 Identities=10% Similarity=-0.059 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHhC----C-CCC-ChhhHHHHHHHHHhcCCHHHHHHHHHHHHhC----CCCC-C
Q 015370 158 ETYTALLHLYAGAKWTEKAEELFERVKQS----N-LSF-NALMYNEMMTLYMSVGQVEKVALVVEEIKRK----NVVP-D 226 (408)
Q Consensus 158 ~~~~~ll~~~~~~~~~~~A~~~~~~m~~~----~-~~p-~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~----g~~p-~ 226 (408)
.++..+...|...|++++|...+++..+. + ..+ ...+++.+...|...|++++|...|++..+. +..+ .
T Consensus 142 ~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~ 221 (378)
T 3q15_A 142 EFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFI 221 (378)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 34444555555555555555555444321 0 000 1334555555555555555555555544321 1111 1
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcC---CCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccC----cc
Q 015370 227 IFTYNLWISSCAATLNIDQVKKFLDEMSCD---SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR----QW 299 (408)
Q Consensus 227 ~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~---~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~----~~ 299 (408)
..++..+..+|...|++++|.+.+++..+. .+.+....++..+...|.+.|++++|.. .+++........ ..
T Consensus 222 ~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~-~~~~al~~~~~~~~~~~~ 300 (378)
T 3q15_A 222 AISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQ-FIEEGLDHITARSHKFYK 300 (378)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHHCCTTCCSCHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHcCCHHHH
Confidence 234445555555556666555555554430 0112224445555666666666666666 555554432211 11
Q ss_pred chHHHHHHHHHhcCC---HHHHHHHHHHHHhccCCCC-hhhHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 015370 300 ITYDFLIILYAGLGN---KDKIDQIWKSLRMTKQKMT-SRNYICILSSYLMLGHLKEVGEIIDQWKQ 362 (408)
Q Consensus 300 ~~~~~li~~~~~~~~---~~~a~~~~~~m~~~~~~p~-~~~~~~li~~~~~~g~~~~A~~~~~~~~~ 362 (408)
..+..+...+...++ +.+|+..+++ .+..|+ ...+..+...|...|++++|...|++..+
T Consensus 301 ~~~~~l~~ly~~~~~~~~~~~al~~~~~---~~~~~~~~~~~~~la~~y~~~g~~~~A~~~~~~al~ 364 (378)
T 3q15_A 301 ELFLFLQAVYKETVDERKIHDLLSYFEK---KNLHAYIEACARSAAAVFESSCHFEQAAAFYRKVLK 364 (378)
T ss_dssp HHHHHHHHHHSSSCCHHHHHHHHHHHHH---TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcHHHHHHHHHHHHh---CCChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 233344444445555 5555555543 222222 22344566667777777777777766654
No 84
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.25 E-value=7.3e-10 Score=92.57 Aligned_cols=205 Identities=11% Similarity=-0.015 Sum_probs=155.1
Q ss_pred CChhhHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHHHHhcCCCCCC-CHHHHHHHH
Q 015370 86 ATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAK-TSETYTALL 164 (408)
Q Consensus 86 ~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~-~~~~~~~ll 164 (408)
.|+..+......+...|++++|++.|+...+.. ..++...+..+..++...|++++|++.|++.....| +..+|..+.
T Consensus 5 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~ 83 (228)
T 4i17_A 5 TDPNQLKNEGNDALNAKNYAVAFEKYSEYLKLT-NNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKS 83 (228)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT-TTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHccCHHHHHHHHHHHHhcc-CCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHH
Confidence 466888889999999999999999999999875 227778888889999999999999999998776654 578899999
Q ss_pred HHHHcCCCHHHHHHHHHHHHhCCCCCCh-------hhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCC---HHHHHHHH
Q 015370 165 HLYAGAKWTEKAEELFERVKQSNLSFNA-------LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPD---IFTYNLWI 234 (408)
Q Consensus 165 ~~~~~~~~~~~A~~~~~~m~~~~~~p~~-------~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~---~~~~~~ll 234 (408)
..|...|++++|+..|++..+.. +.+. ..|..+...+...|++++|...|++..+. .|+ ...+..+.
T Consensus 84 ~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--~p~~~~~~~~~~l~ 160 (228)
T 4i17_A 84 AAYRDMKNNQEYIATLTEGIKAV-PGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDV--TSKKWKTDALYSLG 160 (228)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS--SCHHHHHHHHHHHH
T ss_pred HHHHHcccHHHHHHHHHHHHHHC-CCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhc--CCCcccHHHHHHHH
Confidence 99999999999999999998864 3344 55888888899999999999999999875 455 45666666
Q ss_pred HHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHH
Q 015370 235 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFL 305 (408)
Q Consensus 235 ~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l 305 (408)
.++...| ..+++++... ...+...|.... ....+.+++|.. .+++..+..+. +..+...+
T Consensus 161 ~~~~~~~-----~~~~~~a~~~--~~~~~~~~~~~~--~~~~~~~~~A~~-~~~~a~~l~p~-~~~~~~~l 220 (228)
T 4i17_A 161 VLFYNNG-----ADVLRKATPL--ASSNKEKYASEK--AKADAAFKKAVD-YLGEAVTLSPN-RTEIKQMQ 220 (228)
T ss_dssp HHHHHHH-----HHHHHHHGGG--TTTCHHHHHHHH--HHHHHHHHHHHH-HHHHHHHHCTT-CHHHHHHH
T ss_pred HHHHHHH-----HHHHHHHHhc--ccCCHHHHHHHH--HHHHHHHHHHHH-HHHHHhhcCCC-CHHHHHHH
Confidence 6665443 4445555552 223344444433 344567899999 88888776543 34444333
No 85
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.23 E-value=8.2e-11 Score=101.38 Aligned_cols=217 Identities=12% Similarity=0.063 Sum_probs=149.4
Q ss_pred HHHHHHHHHcCCCCChhhHHHHHHHHHhcccHHHHHHHHHHHHhc------cCCCCChHHHHHHHHHHHhhcChHHHHHH
Q 015370 73 TNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTH------KEFVLSDSDYATRIDLMTKVFGIHSGERY 146 (408)
Q Consensus 73 ~~~l~~~~~~g~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~------~~~~~~~~~~~~li~~~~~~g~~~~a~~~ 146 (408)
.++++.......+....++..+...+...|++++|++.+++..+. +..+....++..+...+...|++++|...
T Consensus 28 l~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~ 107 (283)
T 3edt_B 28 LEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPL 107 (283)
T ss_dssp HHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHH
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 333333333333445778899999999999999999999998764 21122356788899999999999999999
Q ss_pred HhcCCCC---------CCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhC------C-CCCChhhHHHHHHHHHhcCCHHH
Q 015370 147 FEGLPLS---------AKTSETYTALLHLYAGAKWTEKAEELFERVKQS------N-LSFNALMYNEMMTLYMSVGQVEK 210 (408)
Q Consensus 147 ~~~~~~~---------~~~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~------~-~~p~~~~~~~li~~~~~~g~~~~ 210 (408)
|++.... +....++..+...|...|++++|...|++..+. + .+....++..+...|...|++++
T Consensus 108 ~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 187 (283)
T 3edt_B 108 CKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQD 187 (283)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHH
Confidence 8876543 123678899999999999999999999998765 1 12245688999999999999999
Q ss_pred HHHHHHHHHhC-------CCCCCH-HHHHHHHHHHHhcCC------HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHc
Q 015370 211 VALVVEEIKRK-------NVVPDI-FTYNLWISSCAATLN------IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 276 (408)
Q Consensus 211 a~~~~~~m~~~-------g~~p~~-~~~~~ll~~~~~~g~------~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~ 276 (408)
|...+++.... ...+.. ..+..+.......+. +..+...++.... ..+....++..+...|.+.
T Consensus 188 A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~la~~~~~~ 265 (283)
T 3edt_B 188 AETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREESKDKRRDSAPYGEYGSWYKACKV--DSPTVNTTLRSLGALYRRQ 265 (283)
T ss_dssp HHHHHHHHHHHHHHHHSSSCCSSCCCHHHHHHHHHHTTCCCCC------------CCCC--CCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHHHc
Confidence 99999988753 122222 223333333332222 3333333333322 1233456688999999999
Q ss_pred CchhhhHHHHHHHHHH
Q 015370 277 SHLVNAESSTLVEAEK 292 (408)
Q Consensus 277 ~~~~~a~~~~~~~~~~ 292 (408)
|++++|.. .+++..+
T Consensus 266 g~~~~A~~-~~~~al~ 280 (283)
T 3edt_B 266 GKLEAAHT-LEDCASR 280 (283)
T ss_dssp TCHHHHHH-HHHHHHT
T ss_pred CCHHHHHH-HHHHHHH
Confidence 99999999 8887654
No 86
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.22 E-value=7.3e-10 Score=96.44 Aligned_cols=233 Identities=8% Similarity=-0.052 Sum_probs=137.0
Q ss_pred HHHHHHHHHHhccCCCCChHHHHHHHHHHHh--hcChHHHHHHHhcCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHH
Q 015370 106 HALEISEWMVTHKEFVLSDSDYATRIDLMTK--VFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERV 183 (408)
Q Consensus 106 ~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~--~g~~~~a~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~A~~~~~~m 183 (408)
+|.+++.+..+. .+++...+ .+ +.. .+++++|...|++ ....|...|++++|...|++.
T Consensus 3 ~a~~~~~~a~k~--~~~~~~~~-~~---~~~~~~~~~~~A~~~~~~-------------a~~~~~~~g~~~~A~~~~~~a 63 (292)
T 1qqe_A 3 DPVELLKRAEKK--GVPSSGFM-KL---FSGSDSYKFEEAADLCVQ-------------AATIYRLRKELNLAGDSFLKA 63 (292)
T ss_dssp CHHHHHHHHHHH--SSCCCTHH-HH---HSCCSHHHHHHHHHHHHH-------------HHHHHHHTTCTHHHHHHHHHH
T ss_pred cHHHHHHHHHHH--hCcCCCcc-hh---cCCCCCccHHHHHHHHHH-------------HHHHHHHcCCHHHHHHHHHHH
Confidence 455666666654 23322222 22 111 2247777776554 377788889999998888876
Q ss_pred HhC----CCCCC-hhhHHHHHHHHHhcCCHHHHHHHHHHHHhC----CCCCC-HHHHHHHHHHHHhc-CCHHHHHHHHHH
Q 015370 184 KQS----NLSFN-ALMYNEMMTLYMSVGQVEKVALVVEEIKRK----NVVPD-IFTYNLWISSCAAT-LNIDQVKKFLDE 252 (408)
Q Consensus 184 ~~~----~~~p~-~~~~~~li~~~~~~g~~~~a~~~~~~m~~~----g~~p~-~~~~~~ll~~~~~~-g~~~~a~~~~~~ 252 (408)
.+. |-+++ ..+|+.+..+|.+.|++++|...|++.... |-.+. ..++..+...|... |++++|+..|++
T Consensus 64 l~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~ 143 (292)
T 1qqe_A 64 ADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYEL 143 (292)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHH
Confidence 543 31222 467888888888888888888888877642 11101 34566677777775 778888777777
Q ss_pred HhcCCCCCCC----HHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccc------hHHHHHHHHHhcCCHHHHHHHH
Q 015370 253 MSCDSGGSDD----WVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI------TYDFLIILYAGLGNKDKIDQIW 322 (408)
Q Consensus 253 ~~~~~~~~~~----~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~------~~~~li~~~~~~~~~~~a~~~~ 322 (408)
..+...-..+ ..++..+...|.+.|++++|.. .+.......+..... .|..+..++...|++++|...|
T Consensus 144 Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~-~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~ 222 (292)
T 1qqe_A 144 AGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASD-IYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTL 222 (292)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHH-HHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 7652110001 2346667777777777777777 676666654432221 4555666677777777777777
Q ss_pred HHHHhccCCCChh------hHHHHHHHHH--hcCCHHHHHHHHHHH
Q 015370 323 KSLRMTKQKMTSR------NYICILSSYL--MLGHLKEVGEIIDQW 360 (408)
Q Consensus 323 ~~m~~~~~~p~~~------~~~~li~~~~--~~g~~~~A~~~~~~~ 360 (408)
++..+. .|+.. .+..++.++. ..+++++|+..|+++
T Consensus 223 ~~al~l--~p~~~~~~~~~~l~~l~~~~~~~~~~~~~~A~~~~~~~ 266 (292)
T 1qqe_A 223 QEGQSE--DPNFADSRESNFLKSLIDAVNEGDSEQLSEHCKEFDNF 266 (292)
T ss_dssp HGGGCC-----------HHHHHHHHHHHHTTCTTTHHHHHHHHTTS
T ss_pred HHHHhh--CCCCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHhccC
Confidence 765443 23211 1233444443 345566666666553
No 87
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.15 E-value=1.3e-09 Score=82.29 Aligned_cols=128 Identities=12% Similarity=0.098 Sum_probs=82.9
Q ss_pred hHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHHHHhcCCCCC-CCHHHHHHHHHHHH
Q 015370 90 ELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA-KTSETYTALLHLYA 168 (408)
Q Consensus 90 ~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~-~~~~~~~~ll~~~~ 168 (408)
.+..+...+...|++++|+++++++.+.. +.+...+..+...+...|++++|..+|+++.... .+...+..+...+.
T Consensus 3 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 80 (136)
T 2fo7_A 3 AWYNLGNAYYKQGDYDEAIEYYQKALELD--PRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYY 80 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHHcC--CcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHH
Confidence 45566677777777777777777776653 3455666666666777777777777766654432 34556666666666
Q ss_pred cCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 015370 169 GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 220 (408)
Q Consensus 169 ~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~ 220 (408)
..|++++|.+.++++.... +.+..++..+...+.+.|++++|...++++..
T Consensus 81 ~~~~~~~A~~~~~~~~~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~ 131 (136)
T 2fo7_A 81 KQGDYDEAIEYYQKALELD-PRSAEAWYNLGNAYYKQGDYDEAIEYYQKALE 131 (136)
T ss_dssp TTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHccHHHHHHHHHHHHc
Confidence 7777777777776666543 33455666666666666666666666666654
No 88
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=99.15 E-value=1.8e-08 Score=86.51 Aligned_cols=245 Identities=12% Similarity=0.058 Sum_probs=168.6
Q ss_pred HHHHHhcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHHHHhcCCCCCCCHHHHHHHHHHHHcCCCHH
Q 015370 95 LKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE 174 (408)
Q Consensus 95 i~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~ 174 (408)
++-..-.|.+..++.- ..+..+..+ ...--.+.+++...|++... + ...|....+..+...+ ..+
T Consensus 20 ikn~fy~G~yq~~i~e---~~~~~~~~~-~~~~~~~~Rs~iAlg~~~~~------~-~~~~~~~a~~~la~~~-~~~--- 84 (310)
T 3mv2_B 20 IKQNYYTGNFVQCLQE---IEKFSKVTD-NTLLFYKAKTLLALGQYQSQ------D-PTSKLGKVLDLYVQFL-DTK--- 84 (310)
T ss_dssp HHHHHTTTCHHHHTHH---HHTSSCCCC-HHHHHHHHHHHHHTTCCCCC------C-SSSTTHHHHHHHHHHH-TTT---
T ss_pred HHHHHHhhHHHHHHHH---HHhcCccch-HHHHHHHHHHHHHcCCCccC------C-CCCHHHHHHHHHHHHh-ccc---
Confidence 4556678999988873 332221112 22333345788888887642 1 2235555555555544 322
Q ss_pred HHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCC-CCHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 015370 175 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVV-PDIFTYNLWISSCAATLNIDQVKKFLDEM 253 (408)
Q Consensus 175 ~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~-p~~~~~~~ll~~~~~~g~~~~a~~~~~~~ 253 (408)
|+..|++....+ +++..++..+..++...|++++|++++.+.+..|.. -+...+..++..+.+.|+.+.|.+.+++|
T Consensus 85 -a~~~l~~l~~~~-~~~~~~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~ 162 (310)
T 3mv2_B 85 -NIEELENLLKDK-QNSPYELYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNY 162 (310)
T ss_dssp -CCHHHHHTTTTS-CCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred -HHHHHHHHHhcC-CCCcHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 788888888765 556677778899999999999999999998776642 25677888899999999999999999999
Q ss_pred hcCCCCCC-----CHHHHHHHHHH--HHHcC--chhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCHHHHHHHHHH
Q 015370 254 SCDSGGSD-----DWVKYVNLVNI--YITAS--HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS 324 (408)
Q Consensus 254 ~~~~~~~~-----~~~~~~~li~~--~~~~~--~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~ 324 (408)
.+. .| +..+...|..+ ....| +..+|.. +|+++.+..+ +..+-..++.++.+.|++++|.+.++.
T Consensus 163 ~~~---~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~-~f~El~~~~p--~~~~~~lLln~~~~~g~~~eAe~~L~~ 236 (310)
T 3mv2_B 163 TNA---IEDTVSGDNEMILNLAESYIKFATNKETATSNFY-YYEELSQTFP--TWKTQLGLLNLHLQQRNIAEAQGIVEL 236 (310)
T ss_dssp HHH---SCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHH-HHHHHHTTSC--SHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred Hhc---CccccccchHHHHHHHHHHHHHHhCCccHHHHHH-HHHHHHHhCC--CcccHHHHHHHHHHcCCHHHHHHHHHH
Confidence 873 45 24555555555 33334 8999999 8998765543 322333455588899999999999997
Q ss_pred HHhccC--------CC-ChhhHHHHHHHHHhcCCHHHHHHHHHHHHhhC
Q 015370 325 LRMTKQ--------KM-TSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364 (408)
Q Consensus 325 m~~~~~--------~p-~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~ 364 (408)
+.+.-+ .| ++.++..+|......|+ +|.+++.++.+..
T Consensus 237 l~~~~p~~~~k~~~~p~~~~~LaN~i~l~~~lgk--~a~~l~~qL~~~~ 283 (310)
T 3mv2_B 237 LLSDYYSVEQKENAVLYKPTFLANQITLALMQGL--DTEDLTNQLVKLD 283 (310)
T ss_dssp HHSHHHHTTTCHHHHSSHHHHHHHHHHHHHHTTC--TTHHHHHHHHHTT
T ss_pred HHHhcccccccccCCCCCHHHHHHHHHHHHHhCh--HHHHHHHHHHHhC
Confidence 765411 13 55566567766677787 8899999998854
No 89
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.15 E-value=4.3e-09 Score=79.30 Aligned_cols=130 Identities=17% Similarity=0.095 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHH
Q 015370 265 KYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY 344 (408)
Q Consensus 265 ~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~ 344 (408)
.|..+...+...|++++|.. ++..+.+..+ .+...+..+...+...|++++|...++++...+. .+...+..+...+
T Consensus 3 ~~~~l~~~~~~~~~~~~A~~-~~~~~~~~~~-~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~l~~~~ 79 (136)
T 2fo7_A 3 AWYNLGNAYYKQGDYDEAIE-YYQKALELDP-RSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDP-RSAEAWYNLGNAY 79 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHH-HHHHHHHHCT-TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCcHHHHHH-HHHHHHHcCC-cchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCC-CchHHHHHHHHHH
Confidence 35566667777777777777 6666655432 2455666677777777777777777777766542 2455666777778
Q ss_pred HhcCCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhc
Q 015370 345 LMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 399 (408)
Q Consensus 345 ~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~ 399 (408)
...|++++|..+++++.+.. +.+...+..+...+.+.|++++|...++++.+.
T Consensus 80 ~~~~~~~~A~~~~~~~~~~~--~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 132 (136)
T 2fo7_A 80 YKQGDYDEAIEYYQKALELD--PRSAEAWYNLGNAYYKQGDYDEAIEYYQKALEL 132 (136)
T ss_dssp HTTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHHhC--CCChHHHHHHHHHHHHHccHHHHHHHHHHHHcc
Confidence 88888888888888877754 345677777888888888888888888887763
No 90
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.13 E-value=2.8e-09 Score=91.03 Aligned_cols=168 Identities=13% Similarity=-0.020 Sum_probs=110.2
Q ss_pred CCChhhHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCC---hHHHHHHHHHHHhhcChHHHHHHHhcCCCCCC----CH
Q 015370 85 QATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLS---DSDYATRIDLMTKVFGIHSGERYFEGLPLSAK----TS 157 (408)
Q Consensus 85 ~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~---~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~----~~ 157 (408)
+.+...+..+...+.+.|++++|++.|+.+.+.. +.+ ...+..+..++.+.|++++|...|++.....| ..
T Consensus 12 ~~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~--p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~ 89 (261)
T 3qky_A 12 HSSPQEAFERAMEFYNQGKYDRAIEYFKAVFTYG--RTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVP 89 (261)
T ss_dssp CSSHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGC--SCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHH
T ss_pred CCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC--CCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhH
Confidence 3456677778888889999999999999998764 223 56777788888899999999988888765433 25
Q ss_pred HHHHHHHHHHHc--------CCCHHHHHHHHHHHHhCCCCCChhhH-----------------HHHHHHHHhcCCHHHHH
Q 015370 158 ETYTALLHLYAG--------AKWTEKAEELFERVKQSNLSFNALMY-----------------NEMMTLYMSVGQVEKVA 212 (408)
Q Consensus 158 ~~~~~ll~~~~~--------~~~~~~A~~~~~~m~~~~~~p~~~~~-----------------~~li~~~~~~g~~~~a~ 212 (408)
..+..+..++.+ .|++++|...|+++.+.. |-+.... ..+...|.+.|++++|.
T Consensus 90 ~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~-p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 168 (261)
T 3qky_A 90 QAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRY-PNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAA 168 (261)
T ss_dssp HHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHC-TTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHC-cCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHH
Confidence 567777888888 888999999998888753 2233333 33345555566666666
Q ss_pred HHHHHHHhCCCCC--CHHHHHHHHHHHHhc----------CCHHHHHHHHHHHhc
Q 015370 213 LVVEEIKRKNVVP--DIFTYNLWISSCAAT----------LNIDQVKKFLDEMSC 255 (408)
Q Consensus 213 ~~~~~m~~~g~~p--~~~~~~~ll~~~~~~----------g~~~~a~~~~~~~~~ 255 (408)
..|+.+.+..... ....+..+..+|... |++++|...|+++.+
T Consensus 169 ~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~ 223 (261)
T 3qky_A 169 VTYEAVFDAYPDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQ 223 (261)
T ss_dssp HHHHHHHHHCTTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHH
Confidence 6666555432211 123444444455443 555556665555554
No 91
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=99.11 E-value=3.4e-08 Score=84.83 Aligned_cols=258 Identities=11% Similarity=0.002 Sum_probs=170.1
Q ss_pred cHHHHHHHHHHcCCCCChhhHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHHHHhcC
Q 015370 71 SATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGL 150 (408)
Q Consensus 71 ~a~~~l~~~~~~g~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~ 150 (408)
.-..++++..+-..........-+.+++...|++.... . -.|....+..+...+ ..+ |+..|+++
T Consensus 28 ~yq~~i~e~~~~~~~~~~~~~~~~~Rs~iAlg~~~~~~---------~-~~~~~~a~~~la~~~-~~~----a~~~l~~l 92 (310)
T 3mv2_B 28 NFVQCLQEIEKFSKVTDNTLLFYKAKTLLALGQYQSQD---------P-TSKLGKVLDLYVQFL-DTK----NIEELENL 92 (310)
T ss_dssp CHHHHTHHHHTSSCCCCHHHHHHHHHHHHHTTCCCCCC---------S-SSTTHHHHHHHHHHH-TTT----CCHHHHHT
T ss_pred HHHHHHHHHHhcCccchHHHHHHHHHHHHHcCCCccCC---------C-CCHHHHHHHHHHHHh-ccc----HHHHHHHH
Confidence 44556665443222222233334557777777766321 1 234433444444333 322 67778877
Q ss_pred CCC-CCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCC-CCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCC---
Q 015370 151 PLS-AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNL-SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVP--- 225 (408)
Q Consensus 151 ~~~-~~~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~-~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p--- 225 (408)
... .++..++..+..++...|++++|++++.+.+..|- .-+...+..++..+.+.|+.+.|.+.++.|.+. .|
T Consensus 93 ~~~~~~~~~~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~--~~d~~ 170 (310)
T 3mv2_B 93 LKDKQNSPYELYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNA--IEDTV 170 (310)
T ss_dssp TTTSCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--SCHHH
T ss_pred HhcCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc--Ccccc
Confidence 665 36666667888999999999999999999877652 136778889999999999999999999999874 45
Q ss_pred --CHHHHHHHHHH--HHhcC--CHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhc-----
Q 015370 226 --DIFTYNLWISS--CAATL--NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI----- 294 (408)
Q Consensus 226 --~~~~~~~ll~~--~~~~g--~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~----- 294 (408)
+..+...+..+ ....| ++.+|..+|+++.+. .|++.....++.++.+.|++++|.+ .++.+.+.-
T Consensus 171 ~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~---~p~~~~~~lLln~~~~~g~~~eAe~-~L~~l~~~~p~~~~ 246 (310)
T 3mv2_B 171 SGDNEMILNLAESYIKFATNKETATSNFYYYEELSQT---FPTWKTQLGLLNLHLQQRNIAEAQG-IVELLLSDYYSVEQ 246 (310)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTT---SCSHHHHHHHHHHHHHHTCHHHHHH-HHHHHHSHHHHTTT
T ss_pred ccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHh---CCCcccHHHHHHHHHHcCCHHHHHH-HHHHHHHhcccccc
Confidence 35566666655 33334 899999999999874 3554444555568999999999999 777655432
Q ss_pred ----ccCccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q 015370 295 ----TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 363 (408)
Q Consensus 295 ----~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~ 363 (408)
.+.+..+...+|......|+ +|.++++++++. .|+.... -++.+....|+++..+
T Consensus 247 k~~~~p~~~~~LaN~i~l~~~lgk--~a~~l~~qL~~~--~P~hp~i----------~d~~~k~~~Fd~~~~k 305 (310)
T 3mv2_B 247 KENAVLYKPTFLANQITLALMQGL--DTEDLTNQLVKL--DHEHAFI----------KHHQEIDAKFDELVRK 305 (310)
T ss_dssp CHHHHSSHHHHHHHHHHHHHHTTC--TTHHHHHHHHHT--TCCCHHH----------HHHHHHHHHHHHHHHT
T ss_pred cccCCCCCHHHHHHHHHHHHHhCh--HHHHHHHHHHHh--CCCChHH----------HHHHHHHHHHHHHHHH
Confidence 23466677566666666776 888999988876 4554321 2345555666665543
No 92
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.11 E-value=8.4e-09 Score=89.70 Aligned_cols=211 Identities=12% Similarity=-0.053 Sum_probs=138.0
Q ss_pred CHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhC----CCCCC-HHHHHHHHHHHHhcCCHHHH
Q 015370 172 WTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK----NVVPD-IFTYNLWISSCAATLNIDQV 246 (408)
Q Consensus 172 ~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~----g~~p~-~~~~~~ll~~~~~~g~~~~a 246 (408)
++++|...|++. ...|...|++++|...|++.... |-.++ ..+|+.+..+|.+.|++++|
T Consensus 32 ~~~~A~~~~~~a---------------~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A 96 (292)
T 1qqe_A 32 KFEEAADLCVQA---------------ATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNA 96 (292)
T ss_dssp HHHHHHHHHHHH---------------HHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred cHHHHHHHHHHH---------------HHHHHHcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCHHHH
Confidence 478888887776 34566788888888888776542 22222 45777888888888888888
Q ss_pred HHHHHHHhcCC---CCCC-CHHHHHHHHHHHHHc-CchhhhHHHHHHHHHHhcccCc-----cchHHHHHHHHHhcCCHH
Q 015370 247 KKFLDEMSCDS---GGSD-DWVKYVNLVNIYITA-SHLVNAESSTLVEAEKSITQRQ-----WITYDFLIILYAGLGNKD 316 (408)
Q Consensus 247 ~~~~~~~~~~~---~~~~-~~~~~~~li~~~~~~-~~~~~a~~~~~~~~~~~~~~~~-----~~~~~~li~~~~~~~~~~ 316 (408)
+..+++..+-. |... ...+++.+...|... |++++|.. .+.+.....+..+ ..+++.+...+...|+++
T Consensus 97 ~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~-~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~ 175 (292)
T 1qqe_A 97 VDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAID-CYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYI 175 (292)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHH-HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHH-HHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHH
Confidence 88887765421 1111 134677888888885 88888888 7777766433221 346777888888888888
Q ss_pred HHHHHHHHHHhccCCCChh------hHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCC---HHHHHHHHHHHH--hcCC
Q 015370 317 KIDQIWKSLRMTKQKMTSR------NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD---ISACNRLLGAFS--DVGL 385 (408)
Q Consensus 317 ~a~~~~~~m~~~~~~p~~~------~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~~---~~~~~~li~~~~--~~g~ 385 (408)
+|+..|++..+........ .|..+..++...|++++|...|++..+....-++ ...+..++.++. ..++
T Consensus 176 ~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~~l~~l~~~~~~~~~~~ 255 (292)
T 1qqe_A 176 EASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADSRESNFLKSLIDAVNEGDSEQ 255 (292)
T ss_dssp HHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC---------HHHHHHHHHHHHTTCTTT
T ss_pred HHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHcCCHHH
Confidence 8888888877654332221 4566777788888888888888887653211111 123444556554 3566
Q ss_pred hHHHHHHHHHHHh
Q 015370 386 TEKANEFHMLLLQ 398 (408)
Q Consensus 386 ~~~a~~~~~~m~~ 398 (408)
+++|+..|+++..
T Consensus 256 ~~~A~~~~~~~~~ 268 (292)
T 1qqe_A 256 LSEHCKEFDNFMR 268 (292)
T ss_dssp HHHHHHHHTTSSC
T ss_pred HHHHHHHhccCCc
Confidence 7778777766544
No 93
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.11 E-value=2.8e-08 Score=84.79 Aligned_cols=188 Identities=9% Similarity=-0.058 Sum_probs=130.8
Q ss_pred CCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCC---hhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCC-CCC-HHH
Q 015370 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFN---ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNV-VPD-IFT 229 (408)
Q Consensus 155 ~~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~---~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~-~p~-~~~ 229 (408)
.+...+-.+...+.+.|++++|...|+++.+.. +.+ ..++..+..+|.+.|++++|...|+...+... .|. ...
T Consensus 13 ~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~-p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a 91 (261)
T 3qky_A 13 SSPQEAFERAMEFYNQGKYDRAIEYFKAVFTYG-RTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQA 91 (261)
T ss_dssp SSHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGC-SCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHH
T ss_pred CCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC-CCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHH
Confidence 467778888888888999999999999988764 223 56788888888899999999999988887532 122 455
Q ss_pred HHHHHHHHHh--------cCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccch
Q 015370 230 YNLWISSCAA--------TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWIT 301 (408)
Q Consensus 230 ~~~ll~~~~~--------~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 301 (408)
+..+..++.. .|++++|...|+++.+.. +.+......+... ...... ....
T Consensus 92 ~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~--p~~~~~~~a~~~~---------------~~~~~~----~~~~ 150 (261)
T 3qky_A 92 EYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRY--PNHELVDDATQKI---------------RELRAK----LARK 150 (261)
T ss_dssp HHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHC--TTCTTHHHHHHHH---------------HHHHHH----HHHH
T ss_pred HHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHC--cCchhHHHHHHHH---------------HHHHHH----HHHH
Confidence 6667777777 888888888888887742 2222222221111 001000 0112
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhccCCC--ChhhHHHHHHHHHhc----------CCHHHHHHHHHHHHhhC
Q 015370 302 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKM--TSRNYICILSSYLML----------GHLKEVGEIIDQWKQSA 364 (408)
Q Consensus 302 ~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p--~~~~~~~li~~~~~~----------g~~~~A~~~~~~~~~~~ 364 (408)
+..+...|...|++++|...|+++.+..... ....+..+..+|... |++++|...|+++.+..
T Consensus 151 ~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~~ 225 (261)
T 3qky_A 151 QYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQIF 225 (261)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHHHC
Confidence 4567788889999999999999888764321 234566677777766 88999999999998864
No 94
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.10 E-value=5.3e-09 Score=90.69 Aligned_cols=174 Identities=10% Similarity=-0.005 Sum_probs=132.5
Q ss_pred HHHHcCCCCChhhHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHHHHhcCCCCCCCH
Q 015370 78 RWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTS 157 (408)
Q Consensus 78 ~~~~~g~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~~ 157 (408)
.+...-.+.+...+..+...+.+.|++++|+..|++..+.. +-+...+..+..++.+.|++++|...++++....|+.
T Consensus 107 ~~l~~~lp~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~--P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~ 184 (287)
T 3qou_A 107 ALLDXVLPREEELXAQQAMQLMQESNYTDALPLLXDAWQLS--NQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDT 184 (287)
T ss_dssp HHHHHHSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT--TSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSH
T ss_pred HHHHHHcCCchhhHHHHHHHHHhCCCHHHHHHHHHHHHHhC--CcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcch
Confidence 34444345566777788888889999999999999988864 4466788888889999999999999999888766665
Q ss_pred HHHHHHH-HHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCC-CHHHHHHHHH
Q 015370 158 ETYTALL-HLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVP-DIFTYNLWIS 235 (408)
Q Consensus 158 ~~~~~ll-~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p-~~~~~~~ll~ 235 (408)
....... ..+.+.++.++|...|++..... |.+...+..+...+...|++++|...|+++.+..... +...+..++.
T Consensus 185 ~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~-P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~ 263 (287)
T 3qou_A 185 RYQGLVAQIELLXQAADTPEIQQLQQQVAEN-PEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQE 263 (287)
T ss_dssp HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcccCccHHHHHHHHhcC-CccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHH
Confidence 4333333 33667777888888888888765 5577888888899999999999999998888764332 2567888888
Q ss_pred HHHhcCCHHHHHHHHHHHh
Q 015370 236 SCAATLNIDQVKKFLDEMS 254 (408)
Q Consensus 236 ~~~~~g~~~~a~~~~~~~~ 254 (408)
.+...|+.++|...+++..
T Consensus 264 ~~~~~g~~~~a~~~~r~al 282 (287)
T 3qou_A 264 ILAALGTGDALASXYRRQL 282 (287)
T ss_dssp HHHHHCTTCHHHHHHHHHH
T ss_pred HHHHcCCCCcHHHHHHHHH
Confidence 8888888888888777654
No 95
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.08 E-value=3.2e-09 Score=84.82 Aligned_cols=162 Identities=13% Similarity=0.078 Sum_probs=101.8
Q ss_pred hHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHHHHhcCCCCCCCHHHHHHHHHH-HH
Q 015370 90 ELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHL-YA 168 (408)
Q Consensus 90 ~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~ll~~-~~ 168 (408)
.+......+.+.|++++|+..|++..+.. +.+...+..+..++...|++++|...|++.....|+...+..+... +.
T Consensus 8 ~~~~~a~~~~~~g~~~~A~~~~~~al~~~--P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~ 85 (176)
T 2r5s_A 8 QLLKQVSELLQQGEHAQALNVIQTLSDEL--QSRGDVKLAKADCLLETKQFELAQELLATIPLEYQDNSYKSLIAKLELH 85 (176)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHTSCHHH--HTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHC--CCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccCChHHHHHHHHHHHH
Confidence 34456666777778888888887776653 4456677777777777888888888887776654444333222211 11
Q ss_pred cCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCC-CHHHHHHHHHHHHhcCCHHHHH
Q 015370 169 GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVP-DIFTYNLWISSCAATLNIDQVK 247 (408)
Q Consensus 169 ~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p-~~~~~~~ll~~~~~~g~~~~a~ 247 (408)
+.++..+|...+++..+.. |-+...+..+...+...|++++|...|+++.+....+ +...+..+...+...|+.++|.
T Consensus 86 ~~~~~~~a~~~~~~al~~~-P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~ 164 (176)
T 2r5s_A 86 QQAAESPELKRLEQELAAN-PDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIA 164 (176)
T ss_dssp HHHTSCHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHH
T ss_pred hhcccchHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHH
Confidence 2222334566677766653 3356677777777777777777777777777654332 2446666677777777777777
Q ss_pred HHHHHHh
Q 015370 248 KFLDEMS 254 (408)
Q Consensus 248 ~~~~~~~ 254 (408)
..|++..
T Consensus 165 ~~y~~al 171 (176)
T 2r5s_A 165 SKYRRQL 171 (176)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7766544
No 96
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.08 E-value=3e-09 Score=87.55 Aligned_cols=163 Identities=10% Similarity=0.019 Sum_probs=98.0
Q ss_pred hhhHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCChHHHHH----------------HHHHHHhhcChHHHHHHHhcCC
Q 015370 88 VSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYAT----------------RIDLMTKVFGIHSGERYFEGLP 151 (408)
Q Consensus 88 ~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~----------------li~~~~~~g~~~~a~~~~~~~~ 151 (408)
...+......+...|++++|+..|++..+.. +-+...|.. +..++.+.|++++|+..|++..
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 81 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALN--IDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELL 81 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--HHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC--CCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 3444556667788999999999999998853 223445555 6666667777777777766655
Q ss_pred CCC-CCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCC--HHHHHHHHHHHHhCCCCCCHH
Q 015370 152 LSA-KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ--VEKVALVVEEIKRKNVVPDIF 228 (408)
Q Consensus 152 ~~~-~~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~--~~~a~~~~~~m~~~g~~p~~~ 228 (408)
... .+...|..+..++...|++++|...|++..+.. |-+..+|..+...|...|+ .+.+...++.... ..|...
T Consensus 82 ~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 158 (208)
T 3urz_A 82 QKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLE-ADNLAANIFLGNYYYLTAEQEKKKLETDYKKLSS--PTKMQY 158 (208)
T ss_dssp HHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHHHHHHHHHHHHHC---C--CCHHHH
T ss_pred HHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-CCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhC--CCchhH
Confidence 443 346666667777777777777777777766654 3355666666666654443 2334444443321 222223
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhc
Q 015370 229 TYNLWISSCAATLNIDQVKKFLDEMSC 255 (408)
Q Consensus 229 ~~~~ll~~~~~~g~~~~a~~~~~~~~~ 255 (408)
.+.....++...|++++|...|++..+
T Consensus 159 a~~~~g~~~~~~~~~~~A~~~~~~al~ 185 (208)
T 3urz_A 159 ARYRDGLSKLFTTRYEKARNSLQKVIL 185 (208)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 333344445556667777777776665
No 97
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.04 E-value=1.4e-08 Score=83.37 Aligned_cols=122 Identities=12% Similarity=0.016 Sum_probs=51.7
Q ss_pred HHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhc
Q 015370 233 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL 312 (408)
Q Consensus 233 ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~ 312 (408)
+..++.+.|++++|...|++..+. .+.+...+..+...|...|++++|.. .+++..+..+. +..+|..+...|...
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~--~p~~~~~~~~lg~~~~~~g~~~~A~~-~~~~al~~~P~-~~~a~~~lg~~~~~~ 135 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQK--APNNVDCLEACAEMQVCRGQEKDALR-MYEKILQLEAD-NLAANIFLGNYYYLT 135 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHHTCHHHHHH-HHHHHHHHCTT-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHcCCHHHHHH-HHHHHHHcCCC-CHHHHHHHHHHHHHH
Confidence 444444445555555555444441 23344444445555555555555555 44444443222 334444444444333
Q ss_pred CC--HHHHHHHHHHHHhccCCCChh--hHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 015370 313 GN--KDKIDQIWKSLRMTKQKMTSR--NYICILSSYLMLGHLKEVGEIIDQWKQ 362 (408)
Q Consensus 313 ~~--~~~a~~~~~~m~~~~~~p~~~--~~~~li~~~~~~g~~~~A~~~~~~~~~ 362 (408)
|+ ...+...+.... .|+.. .+.....++...|++++|...|++.++
T Consensus 136 ~~~~~~~~~~~~~~~~----~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ 185 (208)
T 3urz_A 136 AEQEKKKLETDYKKLS----SPTKMQYARYRDGLSKLFTTRYEKARNSLQKVIL 185 (208)
T ss_dssp HHHHHHHHHHHHC-------CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHh----CCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 22 222333333221 12221 222233344445566666666666554
No 98
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.02 E-value=1.5e-08 Score=98.87 Aligned_cols=183 Identities=8% Similarity=-0.053 Sum_probs=146.5
Q ss_pred HcCCCHHHHHHHHHHHH--------hCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHh
Q 015370 168 AGAKWTEKAEELFERVK--------QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 239 (408)
Q Consensus 168 ~~~~~~~~A~~~~~~m~--------~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~ 239 (408)
...|++++|++.+++.. +.. +.+...|..+...+...|++++|...|++..+.... +...|..+..++..
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~~~~~-p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~ 479 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDADGVDF-SESVELPLMEVRALLDLGDVAKATRKLDDLAERVGW-RWRLVWYRAVAELL 479 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC-------CC-TTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHhhhhccccccccc-ccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcc-hHHHHHHHHHHHHH
Confidence 78899999999999998 433 456788999999999999999999999999986433 67888889999999
Q ss_pred cCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCHHHHH
Q 015370 240 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID 319 (408)
Q Consensus 240 ~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~ 319 (408)
.|++++|.+.|++..+. .+.+...|..+..+|.+.|++++ .. .+++..+..+. +...|..+..++.+.|++++|.
T Consensus 480 ~g~~~~A~~~~~~al~l--~P~~~~~~~~lg~~~~~~g~~~~-~~-~~~~al~~~P~-~~~a~~~lg~~~~~~g~~~~A~ 554 (681)
T 2pzi_A 480 TGDYDSATKHFTEVLDT--FPGELAPKLALAATAELAGNTDE-HK-FYQTVWSTNDG-VISAAFGLARARSAEGDRVGAV 554 (681)
T ss_dssp HTCHHHHHHHHHHHHHH--STTCSHHHHHHHHHHHHHTCCCT-TC-HHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHH
T ss_pred cCCHHHHHHHHHHHHHh--CCCChHHHHHHHHHHHHcCChHH-HH-HHHHHHHhCCc-hHHHHHHHHHHHHHcCCHHHHH
Confidence 99999999999999873 35577889999999999999999 98 88888776544 6778999999999999999999
Q ss_pred HHHHHHHhccCCCC-hhhHHHHHHHHHhcCC--------HHHHHHHHHH
Q 015370 320 QIWKSLRMTKQKMT-SRNYICILSSYLMLGH--------LKEVGEIIDQ 359 (408)
Q Consensus 320 ~~~~~m~~~~~~p~-~~~~~~li~~~~~~g~--------~~~A~~~~~~ 359 (408)
+.|++..+. .|+ ...+..+..++...++ +++|.+.+..
T Consensus 555 ~~~~~al~l--~P~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~~l~~ 601 (681)
T 2pzi_A 555 RTLDEVPPT--SRHFTTARLTSAVTLLSGRSTSEVTEEQIRDAARRVEA 601 (681)
T ss_dssp HHHHTSCTT--STTHHHHHHHHHHHTC-------CCHHHHHHHHHHHHT
T ss_pred HHHHhhccc--CcccHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHhh
Confidence 999977654 454 4456666666655444 4555555544
No 99
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.00 E-value=9.9e-09 Score=100.07 Aligned_cols=174 Identities=8% Similarity=-0.025 Sum_probs=143.0
Q ss_pred HhcCCHHHHHHHHHHHH--------hCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHH
Q 015370 203 MSVGQVEKVALVVEEIK--------RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 274 (408)
Q Consensus 203 ~~~g~~~~a~~~~~~m~--------~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~ 274 (408)
...|++++|++.+++.. +.. ..+...+..+..++...|++++|.+.|+++.+. .+.+...|..+..+|.
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~~~~~-p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~--~p~~~~a~~~lg~~~~ 478 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDADGVDF-SESVELPLMEVRALLDLGDVAKATRKLDDLAER--VGWRWRLVWYRAVAEL 478 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC-------CC-TTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--HCCCHHHHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHhhhhccccccccc-ccchhHHHHHHHHHHhcCCHHHHHHHHHHHhcc--CcchHHHHHHHHHHHH
Confidence 78899999999999998 432 235677888889999999999999999999873 4567888999999999
Q ss_pred HcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHH
Q 015370 275 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 354 (408)
Q Consensus 275 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~ 354 (408)
+.|++++|.. .+++..+..+. +...|..+...+.+.|++++ ++.|++..+.... +...|..+..++.+.|++++|.
T Consensus 479 ~~g~~~~A~~-~~~~al~l~P~-~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~-~~~a~~~lg~~~~~~g~~~~A~ 554 (681)
T 2pzi_A 479 LTGDYDSATK-HFTEVLDTFPG-ELAPKLALAATAELAGNTDE-HKFYQTVWSTNDG-VISAAFGLARARSAEGDRVGAV 554 (681)
T ss_dssp HHTCHHHHHH-HHHHHHHHSTT-CSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHH
T ss_pred HcCCHHHHHH-HHHHHHHhCCC-ChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCc-hHHHHHHHHHHHHHcCCHHHHH
Confidence 9999999999 89888877544 67889999999999999999 9999998876532 5667888999999999999999
Q ss_pred HHHHHHHhhCCCCCCHHHHHHHHHHHHhcCC
Q 015370 355 EIIDQWKQSATSDFDISACNRLLGAFSDVGL 385 (408)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~ 385 (408)
+.|++..+.. +.+...|..+..++...|+
T Consensus 555 ~~~~~al~l~--P~~~~a~~~~~~~~~~~~~ 583 (681)
T 2pzi_A 555 RTLDEVPPTS--RHFTTARLTSAVTLLSGRS 583 (681)
T ss_dssp HHHHTSCTTS--TTHHHHHHHHHHHTC----
T ss_pred HHHHhhcccC--cccHHHHHHHHHHHHccCC
Confidence 9999987643 2345677778888766555
No 100
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=98.99 E-value=1.5e-06 Score=83.79 Aligned_cols=219 Identities=7% Similarity=-0.037 Sum_probs=139.1
Q ss_pred HHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHH-HHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhc
Q 015370 177 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVA-LVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 255 (408)
Q Consensus 177 ~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~-~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~ 255 (408)
..+|++.+.. ++-+...|-..+..+...|+.++|. ++|+..... ++.+...|-..+...-+.|++++|.++|+.+.+
T Consensus 329 ~~~Ye~aL~~-~p~~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~-~P~s~~Lwl~~a~~ee~~~~~e~aR~iyek~l~ 406 (679)
T 4e6h_A 329 TYVYMQAAQH-VCFAPEIWFNMANYQGEKNTDSTVITKYLKLGQQC-IPNSAVLAFSLSEQYELNTKIPEIETTILSCID 406 (679)
T ss_dssp HHHHHHHHHH-TTTCHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-cCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 3444444443 2334455555566666677777775 888877763 333555566667777778888888888888765
Q ss_pred CC---------CCCC-----------CHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhc-CC
Q 015370 256 DS---------GGSD-----------DWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL-GN 314 (408)
Q Consensus 256 ~~---------~~~~-----------~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~-~~ 314 (408)
.. ..+. ...+|...+....+.|..+.|.. ++....+..+......|...+..-.+. ++
T Consensus 407 ~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~-vf~~A~~~~~~~~~~lyi~~A~lE~~~~~d 485 (679)
T 4e6h_A 407 RIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRK-IFGKCRRLKKLVTPDIYLENAYIEYHISKD 485 (679)
T ss_dssp HHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH-HHHHHHHTGGGSCTHHHHHHHHHHHTTTSC
T ss_pred HHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHH-HHHHHHHhcCCCChHHHHHHHHHHHHhCCC
Confidence 20 0111 12357777777777788888888 787776653322333343332222333 45
Q ss_pred HHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCC-CCHHHHHHHHHHHHhcCChHHHHHHH
Q 015370 315 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSD-FDISACNRLLGAFSDVGLTEKANEFH 393 (408)
Q Consensus 315 ~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~-~~~~~~~~li~~~~~~g~~~~a~~~~ 393 (408)
.+.|..+|+...+.- .-+...+...++.....|+.+.|..+|++.+...... .....|...+..-.+.|+.+.+..+.
T Consensus 486 ~e~Ar~ife~~Lk~~-p~~~~~w~~y~~fe~~~~~~~~AR~lferal~~~~~~~~~~~lw~~~~~fE~~~G~~~~~~~v~ 564 (679)
T 4e6h_A 486 TKTACKVLELGLKYF-ATDGEYINKYLDFLIYVNEESQVKSLFESSIDKISDSHLLKMIFQKVIFFESKVGSLNSVRTLE 564 (679)
T ss_dssp CHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHTTTSSSTTHHHHHHHHHHHHHHHTCCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHC-CCchHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 788888888776652 2244445567777777888888888888887653110 13457777777777888888888888
Q ss_pred HHHHhc
Q 015370 394 MLLLQK 399 (408)
Q Consensus 394 ~~m~~~ 399 (408)
+++.+.
T Consensus 565 ~R~~~~ 570 (679)
T 4e6h_A 565 KRFFEK 570 (679)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 888774
No 101
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=98.99 E-value=6.9e-08 Score=80.34 Aligned_cols=105 Identities=4% Similarity=-0.089 Sum_probs=68.3
Q ss_pred hcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCHHHH
Q 015370 239 ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKI 318 (408)
Q Consensus 239 ~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a 318 (408)
..|++++|...|+++.+. .|.+...+.+.... +....... .....+...|.+.|++++|
T Consensus 108 ~~~~~~~A~~~~~~~l~~--~P~~~~a~~a~~~l----~~~~~~~~---------------~~~~~~a~~~~~~~~~~~A 166 (225)
T 2yhc_A 108 DPQQARAAFSDFSKLVRG--YPNSQYTTDATKRL----VFLKDRLA---------------KYEYSVAEYYTERGAWVAV 166 (225)
T ss_dssp CCHHHHHHHHHHHHHHTT--CTTCTTHHHHHHHH----HHHHHHHH---------------HHHHHHHHHHHHHTCHHHH
T ss_pred CcHHHHHHHHHHHHHHHH--CcCChhHHHHHHHH----HHHHHHHH---------------HHHHHHHHHHHHcCcHHHH
Confidence 467889999999998874 23333332221111 00000000 0123456778899999999
Q ss_pred HHHHHHHHhccCCCC--hhhHHHHHHHHHhcCCHHHHHHHHHHHHhhC
Q 015370 319 DQIWKSLRMTKQKMT--SRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364 (408)
Q Consensus 319 ~~~~~~m~~~~~~p~--~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~ 364 (408)
...|+++.+...... ...+..+..++.+.|+.++|.+.++.+...+
T Consensus 167 ~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~A~~~~~~l~~~~ 214 (225)
T 2yhc_A 167 VNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEKVAKIIAANS 214 (225)
T ss_dssp HHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCCcHHHHHHHHHHHhhC
Confidence 999999887643211 2457778899999999999999999888754
No 102
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.98 E-value=4.1e-07 Score=78.78 Aligned_cols=217 Identities=8% Similarity=-0.012 Sum_probs=128.8
Q ss_pred hHHHHHHHhcCCCCCC-CHHHHHHHHHHHHcCC--CHHHHHHHHHHHHhCCCCCChhhHHHHHHHH----Hhc---CCHH
Q 015370 140 IHSGERYFEGLPLSAK-TSETYTALLHLYAGAK--WTEKAEELFERVKQSNLSFNALMYNEMMTLY----MSV---GQVE 209 (408)
Q Consensus 140 ~~~a~~~~~~~~~~~~-~~~~~~~ll~~~~~~~--~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~----~~~---g~~~ 209 (408)
.++|+++++.+....| +..+|+.--..+...+ +++++++.++.+.... +-+..+|+.--..+ .+. ++++
T Consensus 49 s~~aL~~t~~~L~~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~n-Pk~y~aW~~R~~iL~~~~~~l~~~~~~~ 127 (306)
T 3dra_A 49 SERALHITELGINELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDN-EKNYQIWNYRQLIIGQIMELNNNDFDPY 127 (306)
T ss_dssp SHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHC-TTCCHHHHHHHHHHHHHHHHTTTCCCTH
T ss_pred CHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHC-cccHHHHHHHHHHHHHHHHhccccCCHH
Confidence 3567777766555433 3556666666666666 7777777777776654 33455665554444 444 5667
Q ss_pred HHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHH--HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCc------hhh
Q 015370 210 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID--QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH------LVN 281 (408)
Q Consensus 210 ~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~--~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~------~~~ 281 (408)
+++.+++.+.+...+ +-.+|+--.-.+.+.|+++ +++++++++.+. .+-+...|+.-...+.+.+. +++
T Consensus 128 ~EL~~~~~~l~~~pk-ny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~--d~~N~sAW~~R~~ll~~l~~~~~~~~~~e 204 (306)
T 3dra_A 128 REFDILEAMLSSDPK-NHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDT--DLKNNSAWSHRFFLLFSKKHLATDNTIDE 204 (306)
T ss_dssp HHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHSSGGGCCHHHHHH
T ss_pred HHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhcccChHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHhccccchhhhHHH
Confidence 777777777765443 5566666656666666666 677777776662 34455666655555555554 566
Q ss_pred hHHHHHHHHHHhcccCccchHHHHHHHHHhcCCHHH-HHHHHHHHHhcc--CCCChhhHHHHHHHHHhcCCHHHHHHHHH
Q 015370 282 AESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK-IDQIWKSLRMTK--QKMTSRNYICILSSYLMLGHLKEVGEIID 358 (408)
Q Consensus 282 a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~-a~~~~~~m~~~~--~~p~~~~~~~li~~~~~~g~~~~A~~~~~ 358 (408)
+++ .+..+....+. |...|+.+-..+.+.|+... +..+..++...+ -..+...+..+.+.|.+.|+.++|.++++
T Consensus 205 El~-~~~~aI~~~p~-n~SaW~y~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~s~~al~~la~~~~~~~~~~~A~~~~~ 282 (306)
T 3dra_A 205 ELN-YVKDKIVKCPQ-NPSTWNYLLGIHERFDRSITQLEEFSLQFVDLEKDQVTSSFALETLAKIYTQQKKYNESRTVYD 282 (306)
T ss_dssp HHH-HHHHHHHHCSS-CHHHHHHHHHHHHHTTCCGGGGHHHHHTTEEGGGTEESCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHH-HHHHHHHhCCC-CccHHHHHHHHHHhcCCChHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHccCCHHHHHHHHH
Confidence 666 55555554433 66666666666666665333 444555444332 01244455666666666677777777777
Q ss_pred HHHh
Q 015370 359 QWKQ 362 (408)
Q Consensus 359 ~~~~ 362 (408)
.+.+
T Consensus 283 ~l~~ 286 (306)
T 3dra_A 283 LLKS 286 (306)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7664
No 103
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=98.96 E-value=1.4e-07 Score=78.41 Aligned_cols=190 Identities=9% Similarity=-0.004 Sum_probs=122.0
Q ss_pred ChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCC-C-CHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCH-HHHH
Q 015370 191 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVV-P-DIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW-VKYV 267 (408)
Q Consensus 191 ~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~-p-~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~-~~~~ 267 (408)
+...+..+...+.+.|++++|...|+++...... | ....+..+..++.+.|++++|+..|+++.+...-.+.. ..+.
T Consensus 3 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~ 82 (225)
T 2yhc_A 3 PPNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMY 82 (225)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHH
Confidence 4556677788889999999999999999875332 1 13567778889999999999999999988743222221 2344
Q ss_pred HHHHHHHH------------------cCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCHHHHHHHHHHHHhcc
Q 015370 268 NLVNIYIT------------------ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 329 (408)
Q Consensus 268 ~li~~~~~------------------~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~ 329 (408)
.+..++.+ .|+.++|.. .+..+.+..+. +...+...... ..+...+.
T Consensus 83 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~-~~~~~l~~~P~-~~~a~~a~~~l----------~~~~~~~~--- 147 (225)
T 2yhc_A 83 MRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFS-DFSKLVRGYPN-SQYTTDATKRL----------VFLKDRLA--- 147 (225)
T ss_dssp HHHHHHHHHHC--------------CCHHHHHHHH-HHHHHHTTCTT-CTTHHHHHHHH----------HHHHHHHH---
T ss_pred HHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHH-HHHHHHHHCcC-ChhHHHHHHHH----------HHHHHHHH---
Confidence 44555544 345555555 55544443322 12222111100 00000000
Q ss_pred CCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCC-HHHHHHHHHHHHhcCChHHHHHHHHHHHhcC
Q 015370 330 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD-ISACNRLLGAFSDVGLTEKANEFHMLLLQKN 400 (408)
Q Consensus 330 ~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~~-~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g 400 (408)
.....+...|.+.|++++|...|+++++.....|. ...+..+..++.+.|++++|.+.++.+...+
T Consensus 148 -----~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~A~~~~~~l~~~~ 214 (225)
T 2yhc_A 148 -----KYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEKVAKIIAANS 214 (225)
T ss_dssp -----HHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCC
T ss_pred -----HHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCCcHHHHHHHHHHHhhC
Confidence 01124567788999999999999999986421111 2568889999999999999999999988753
No 104
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.96 E-value=2.6e-08 Score=86.29 Aligned_cols=165 Identities=6% Similarity=-0.071 Sum_probs=87.1
Q ss_pred CCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHH-HH
Q 015370 189 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVK-YV 267 (408)
Q Consensus 189 ~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~-~~ 267 (408)
+.+...+..+...+...|++++|...|++....... +...+..+...+...|++++|...++++... .|+... ..
T Consensus 114 p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~---~p~~~~~~~ 189 (287)
T 3qou_A 114 PREEELXAQQAMQLMQESNYTDALPLLXDAWQLSNQ-NGEIGLLLAETLIALNRSEDAEAVLXTIPLQ---DQDTRYQGL 189 (287)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTS-CHHHHHHHHHHHHHTTCHHHHHHHHTTSCGG---GCSHHHHHH
T ss_pred CCchhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCc-chhHHHHHHHHHHHCCCHHHHHHHHHhCchh---hcchHHHHH
Confidence 334556666666667777777777777776654322 4556666666777777777777777666552 233322 12
Q ss_pred HHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCC-ChhhHHHHHHHHHh
Q 015370 268 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM-TSRNYICILSSYLM 346 (408)
Q Consensus 268 ~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p-~~~~~~~li~~~~~ 346 (408)
.....+.+.++.++|.. .+.+.....+. +...+..+...+...|++++|.+.|.++.+..... +...+..++..+..
T Consensus 190 ~~~~~l~~~~~~~~a~~-~l~~al~~~P~-~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~ 267 (287)
T 3qou_A 190 VAQIELLXQAADTPEIQ-QLQQQVAENPE-DAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAA 267 (287)
T ss_dssp HHHHHHHHHHTSCHHHH-HHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHH
T ss_pred HHHHHHHhhcccCccHH-HHHHHHhcCCc-cHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHH
Confidence 22222444444555555 44444443322 44455555555555555555555555555442211 13344455555555
Q ss_pred cCCHHHHHHHHHH
Q 015370 347 LGHLKEVGEIIDQ 359 (408)
Q Consensus 347 ~g~~~~A~~~~~~ 359 (408)
.|+.++|...+++
T Consensus 268 ~g~~~~a~~~~r~ 280 (287)
T 3qou_A 268 LGTGDALASXYRR 280 (287)
T ss_dssp HCTTCHHHHHHHH
T ss_pred cCCCCcHHHHHHH
Confidence 5555555555544
No 105
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.95 E-value=2.5e-07 Score=80.17 Aligned_cols=218 Identities=10% Similarity=0.077 Sum_probs=169.8
Q ss_pred cHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhc--ChHHHHHHHhcCCCCC-CCHHHHHHHHHHH----HcC---CC
Q 015370 103 RYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVF--GIHSGERYFEGLPLSA-KTSETYTALLHLY----AGA---KW 172 (408)
Q Consensus 103 ~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g--~~~~a~~~~~~~~~~~-~~~~~~~~ll~~~----~~~---~~ 172 (408)
..++|+++++.+.... +-+...|+.--.++...| ++++++++++.+.... .+..+|+.--..+ ... ++
T Consensus 48 ~s~~aL~~t~~~L~~n--P~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~~~~~ 125 (306)
T 3dra_A 48 YSERALHITELGINEL--ASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNNDFD 125 (306)
T ss_dssp CSHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTTTCCC
T ss_pred CCHHHHHHHHHHHHHC--cHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhccccCC
Confidence 4468999999998864 444567888888888888 8999999998877653 4566776665555 555 78
Q ss_pred HHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHH--HHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCC------HH
Q 015370 173 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE--KVALVVEEIKRKNVVPDIFTYNLWISSCAATLN------ID 244 (408)
Q Consensus 173 ~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~--~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~------~~ 244 (408)
+++++++++++.+.. +-+..+|+.-...+.+.|+++ ++++.++.+.+..+. |...|+-....+.+.++ ++
T Consensus 126 ~~~EL~~~~~~l~~~-pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~-N~sAW~~R~~ll~~l~~~~~~~~~~ 203 (306)
T 3dra_A 126 PYREFDILEAMLSSD-PKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLK-NNSAWSHRFFLLFSKKHLATDNTID 203 (306)
T ss_dssp THHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHSSGGGCCHHHHH
T ss_pred HHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHhccccchhhhHH
Confidence 999999999999876 558889988888888889888 999999999987665 77888877777777776 88
Q ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhh-hHHHHHHHHHHhc--ccCccchHHHHHHHHHhcCCHHHHHHH
Q 015370 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN-AESSTLVEAEKSI--TQRQWITYDFLIILYAGLGNKDKIDQI 321 (408)
Q Consensus 245 ~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~-a~~~~~~~~~~~~--~~~~~~~~~~li~~~~~~~~~~~a~~~ 321 (408)
++++.++++... .+-|...|+-+-..+.+.|+... +.. +...+.... ...+...+..+...|.+.|+.++|.++
T Consensus 204 eEl~~~~~aI~~--~p~n~SaW~y~~~ll~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~al~~la~~~~~~~~~~~A~~~ 280 (306)
T 3dra_A 204 EELNYVKDKIVK--CPQNPSTWNYLLGIHERFDRSITQLEE-FSLQFVDLEKDQVTSSFALETLAKIYTQQKKYNESRTV 280 (306)
T ss_dssp HHHHHHHHHHHH--CSSCHHHHHHHHHHHHHTTCCGGGGHH-HHHTTEEGGGTEESCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHh--CCCCccHHHHHHHHHHhcCCChHHHHH-HHHHHHhccCCCCCCHHHHHHHHHHHHccCCHHHHHHH
Confidence 899999888873 46788889988888888888555 444 444443322 234667888899999999999999999
Q ss_pred HHHHHh
Q 015370 322 WKSLRM 327 (408)
Q Consensus 322 ~~~m~~ 327 (408)
++.+.+
T Consensus 281 ~~~l~~ 286 (306)
T 3dra_A 281 YDLLKS 286 (306)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 998865
No 106
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.95 E-value=1.5e-08 Score=80.88 Aligned_cols=79 Identities=10% Similarity=-0.040 Sum_probs=44.9
Q ss_pred HHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHH
Q 015370 318 IDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 397 (408)
Q Consensus 318 a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~ 397 (408)
+...+++..+..+. +...+..+...+...|++++|...|++..+......+...+..+...+...|+.++|...|++.+
T Consensus 93 a~~~~~~al~~~P~-~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y~~al 171 (176)
T 2r5s_A 93 ELKRLEQELAANPD-NFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASKYRRQL 171 (176)
T ss_dssp HHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCC-CHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHHHHHHH
Confidence 45555555443211 34555566666666666666666666666543111234456666666666666666666666554
No 107
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.95 E-value=3.1e-08 Score=94.66 Aligned_cols=152 Identities=10% Similarity=-0.035 Sum_probs=93.6
Q ss_pred cccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHHHHhcCCCCC-CCHHHHHHHHHHHHcCCCHHHHHHH
Q 015370 101 SQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA-KTSETYTALLHLYAGAKWTEKAEEL 179 (408)
Q Consensus 101 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~-~~~~~~~~ll~~~~~~~~~~~A~~~ 179 (408)
.|++++|++.|++..+.. +.+...+..+...+...|++++|.+.|++..... .+...|..+...|...|++++|.+.
T Consensus 2 ~g~~~~A~~~~~~al~~~--p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~ 79 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHR--PQDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVL 79 (568)
T ss_dssp ---------------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CccHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHH
Confidence 366777777777776643 3446677777777777777777777777765553 3467777777777777777777777
Q ss_pred HHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhc---CCHHHHHHHHHHHhcC
Q 015370 180 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT---LNIDQVKKFLDEMSCD 256 (408)
Q Consensus 180 ~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~---g~~~~a~~~~~~~~~~ 256 (408)
|++..+.. +.+...|..+...|.+.|++++|.+.|++..+.... +...+..+..++... |++++|.+.+++..+.
T Consensus 80 ~~~al~~~-p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~ 157 (568)
T 2vsy_A 80 LQQASDAA-PEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPE-EPYITAQLLNWRRRLCDWRALDVLSAQVRAAVAQ 157 (568)
T ss_dssp HHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHhcC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhhccccHHHHHHHHHHHHhc
Confidence 77777654 335667777777777777777777777777665322 456666677777777 7777777777777663
No 108
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=98.93 E-value=4.8e-09 Score=81.30 Aligned_cols=58 Identities=14% Similarity=0.016 Sum_probs=23.4
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 015370 162 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 220 (408)
Q Consensus 162 ~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~ 220 (408)
.+...|.+.|++++|++.|++..+.. +-+..+|..+...|.+.|++++|...|++..+
T Consensus 36 ~la~~y~~~~~~~~A~~~~~~al~~~-p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~ 93 (150)
T 4ga2_A 36 YFAKLYYEAKEYDLAKKYICTYINVQ-ERDPKAHRFLGLLYELEENTDKAVECYRRSVE 93 (150)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCchHHHHHHHHHHHH
Confidence 33344444444444444444443332 22333444444444444444444444444433
No 109
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.93 E-value=8.9e-08 Score=83.81 Aligned_cols=160 Identities=8% Similarity=-0.013 Sum_probs=82.4
Q ss_pred HHHHhcCCHHHHHHHHHHHHhC----CCCCC-HHHHHHHHHHHHhcCCHHHHHHHHHHHhcC---CCCCC-CHHHHHHHH
Q 015370 200 TLYMSVGQVEKVALVVEEIKRK----NVVPD-IFTYNLWISSCAATLNIDQVKKFLDEMSCD---SGGSD-DWVKYVNLV 270 (408)
Q Consensus 200 ~~~~~~g~~~~a~~~~~~m~~~----g~~p~-~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~---~~~~~-~~~~~~~li 270 (408)
..|...|++++|...|.+.... |-.+. ..+|+.+...|...|++++|...|++..+- .|.+. ...++..+.
T Consensus 44 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg 123 (307)
T 2ifu_A 44 VAFKNAKQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAG 123 (307)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4455566666666666554421 11001 234555555666666666666666654331 11111 123455566
Q ss_pred HHHHHcCchhhhHHHHHHHHHHhcccC-----ccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCC-C----hhhHHHH
Q 015370 271 NIYITASHLVNAESSTLVEAEKSITQR-----QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM-T----SRNYICI 340 (408)
Q Consensus 271 ~~~~~~~~~~~a~~~~~~~~~~~~~~~-----~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p-~----~~~~~~l 340 (408)
..|.+ |++++|+. .+.+........ ...+++.+...|...|++++|++.|++........ + ...+..+
T Consensus 124 ~~~~~-g~~~~A~~-~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 201 (307)
T 2ifu_A 124 KLMEP-LDLSKAVH-LYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQ 201 (307)
T ss_dssp HHHTT-TCHHHHHH-HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHc-CCHHHHHH-HHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHH
Confidence 66665 66666666 555554432221 12455566666666677777766666654432110 1 1134444
Q ss_pred HHHHHhcCCHHHHHHHHHHHH
Q 015370 341 LSSYLMLGHLKEVGEIIDQWK 361 (408)
Q Consensus 341 i~~~~~~g~~~~A~~~~~~~~ 361 (408)
...+...|++++|...|++..
T Consensus 202 g~~~~~~g~~~~A~~~~~~al 222 (307)
T 2ifu_A 202 VLVQLHRADYVAAQKCVRESY 222 (307)
T ss_dssp HHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHHHh
Confidence 555555667777777776665
No 110
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.92 E-value=3.8e-07 Score=79.14 Aligned_cols=164 Identities=4% Similarity=-0.112 Sum_probs=100.1
Q ss_pred HHHHHhcCCHHHHHHHHHHHhcCCCCCCCHH----HHHHHHHHHHHcCchhhhHHHHHHHHHHhccc-Cc----cchHHH
Q 015370 234 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWV----KYVNLVNIYITASHLVNAESSTLVEAEKSITQ-RQ----WITYDF 304 (408)
Q Consensus 234 l~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~----~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~-~~----~~~~~~ 304 (408)
+..+...|++++|..++++..+.....|+.. .+..+...+...+++++|.. .+......... ++ ..+++.
T Consensus 82 i~~~~~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~-~~~~al~~~~~~~~~~~~~~~~~~ 160 (293)
T 3u3w_A 82 VIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCIL-ELKKLLNQQLTGIDVYQNLYIENA 160 (293)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHH-HHHHHHHTCCCCSCTTHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHHHHHH-HHHHHHHHhcccccHHHHHHHHHH
Confidence 4556666777777777777665322223321 23345555666667777777 66666653222 12 125677
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHhc-----cCCC-ChhhHHHHHHHHHhcCCHHHHHHHHHHHHhhC---CCCCC-HHHHH
Q 015370 305 LIILYAGLGNKDKIDQIWKSLRMT-----KQKM-TSRNYICILSSYLMLGHLKEVGEIIDQWKQSA---TSDFD-ISACN 374 (408)
Q Consensus 305 li~~~~~~~~~~~a~~~~~~m~~~-----~~~p-~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~---~~~~~-~~~~~ 374 (408)
+...|...|++++|...|++..+. +..+ ...+|..+...|.+.|++++|...+++..+.. ...+. ..+|.
T Consensus 161 lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~ 240 (293)
T 3u3w_A 161 IANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYY 240 (293)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHH
Confidence 777777777777777777766531 1111 12256667777888888888888887765421 11122 46777
Q ss_pred HHHHHHHhcCC-hHHHHHHHHHHHh
Q 015370 375 RLLGAFSDVGL-TEKANEFHMLLLQ 398 (408)
Q Consensus 375 ~li~~~~~~g~-~~~a~~~~~~m~~ 398 (408)
.+..+|.+.|+ +++|.+.+++...
T Consensus 241 ~lg~~~~~~g~~~~~A~~~~~~Al~ 265 (293)
T 3u3w_A 241 QRGECLRKLEYEEAEIEDAYKKASF 265 (293)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCcHHHHHHHHHHHHH
Confidence 78888888884 5888888777653
No 111
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.92 E-value=1.4e-07 Score=77.69 Aligned_cols=176 Identities=10% Similarity=0.061 Sum_probs=109.1
Q ss_pred HHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcC----CHHHHHHHH
Q 015370 175 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL----NIDQVKKFL 250 (408)
Q Consensus 175 ~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g----~~~~a~~~~ 250 (408)
+|++.|++..+.| ++.++..+...|...+++++|...|++..+.| +...+..+...|.. + ++++|.+.|
T Consensus 4 eA~~~~~~aa~~g---~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~g---~~~a~~~lg~~y~~-~g~~~~~~~A~~~~ 76 (212)
T 3rjv_A 4 EPGSQYQQQAEAG---DRRAQYYLADTWVSSGDYQKAEYWAQKAAAQG---DGDALALLAQLKIR-NPQQADYPQARQLA 76 (212)
T ss_dssp CTTHHHHHHHHTT---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTT---CHHHHHHHHHHTTS-STTSCCHHHHHHHH
T ss_pred hHHHHHHHHHHCC---CHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcC---CHHHHHHHHHHHHc-CCCCCCHHHHHHHH
Confidence 4666677766665 66777777777777777777777777776654 44555555555555 5 677777777
Q ss_pred HHHhcCCCCCCCHHHHHHHHHHHHH----cCchhhhHHHHHHHHHHhccc-CccchHHHHHHHHHh----cCCHHHHHHH
Q 015370 251 DEMSCDSGGSDDWVKYVNLVNIYIT----ASHLVNAESSTLVEAEKSITQ-RQWITYDFLIILYAG----LGNKDKIDQI 321 (408)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~li~~~~~----~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~li~~~~~----~~~~~~a~~~ 321 (408)
++..+. + +...+..|...|.. .+++++|.. .+.+..+.++. .+...+..|...|.. .+++++|...
T Consensus 77 ~~A~~~-g---~~~a~~~Lg~~y~~g~g~~~d~~~A~~-~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~ 151 (212)
T 3rjv_A 77 EKAVEA-G---SKSGEIVLARVLVNRQAGATDVAHAIT-LLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEY 151 (212)
T ss_dssp HHHHHT-T---CHHHHHHHHHHHTCGGGSSCCHHHHHH-HHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHH
T ss_pred HHHHHC-C---CHHHHHHHHHHHHcCCCCccCHHHHHH-HHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHH
Confidence 776652 2 45556666666665 566777777 66655544331 124456666666666 6667777777
Q ss_pred HHHHHhccCCCChhhHHHHHHHHHhc-C-----CHHHHHHHHHHHHhhC
Q 015370 322 WKSLRMTKQKMTSRNYICILSSYLML-G-----HLKEVGEIIDQWKQSA 364 (408)
Q Consensus 322 ~~~m~~~~~~p~~~~~~~li~~~~~~-g-----~~~~A~~~~~~~~~~~ 364 (408)
|++..+.+ .+...+..|...|... | +.++|..+|++..+.|
T Consensus 152 ~~~A~~~~--~~~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g 198 (212)
T 3rjv_A 152 FKGSSSLS--RTGYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEG 198 (212)
T ss_dssp HHHHHHTS--CTTHHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHcC--CCHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcC
Confidence 77665541 2333455555555432 2 6777777777776655
No 112
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=98.92 E-value=9.9e-09 Score=79.52 Aligned_cols=146 Identities=8% Similarity=-0.077 Sum_probs=96.3
Q ss_pred HHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCH
Q 015370 164 LHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 243 (408)
Q Consensus 164 l~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~ 243 (408)
...+...|++++|+..++...... +-+...+-.+...|.+.|++++|.+.|++..+.... +..+|..+..++...|++
T Consensus 4 G~~~~~~~~~e~ai~~~~~a~~~~-p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~~~~ 81 (150)
T 4ga2_A 4 GSMRRSKADVERYIASVQGSTPSP-RQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQER-DPKAHRFLGLLYELEENT 81 (150)
T ss_dssp ---CCCHHHHHHHHHHHHHHSCSH-HHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHcChHHHHHHHHHHhcccC-cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCch
Confidence 344555677888888887776643 223456667778888888888888888887775432 567777788888888888
Q ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCC
Q 015370 244 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 314 (408)
Q Consensus 244 ~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~ 314 (408)
++|...|++..+. .+.+...+..+...|.+.|+.++|.+..+++..+..+ .+...|......+...|+
T Consensus 82 ~~A~~~~~~al~~--~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P-~~~~~~~l~~~ll~~~G~ 149 (150)
T 4ga2_A 82 DKAVECYRRSVEL--NPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFP-GSPAVYKLKEQLLDCEGE 149 (150)
T ss_dssp HHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHST-TCHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCc-CCHHHHHHHHHHHHHhCc
Confidence 8888888887762 3446677777888888888877665513455554433 255566655555555543
No 113
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.90 E-value=4.8e-08 Score=93.36 Aligned_cols=154 Identities=8% Similarity=-0.042 Sum_probs=117.1
Q ss_pred cCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHH
Q 015370 205 VGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES 284 (408)
Q Consensus 205 ~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~ 284 (408)
.|++++|...|++..+.... +...+..+...+...|++++|.+.+++..+. .+.+...+..+...|.+.|++++|.+
T Consensus 2 ~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--~p~~~~~~~~lg~~~~~~g~~~~A~~ 78 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHRPQ-DFVAWLMLADAELGMGDTTAGEMAVQRGLAL--HPGHPEAVARLGRVRWTQQRHAEAAV 78 (568)
T ss_dssp -------------------C-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTT--STTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred CccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHCCCHHHHHH
Confidence 47899999999998875332 5788889999999999999999999999883 45678889999999999999999999
Q ss_pred HHHHHHHHhcccCccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhc---CCHHHHHHHHHHHH
Q 015370 285 STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML---GHLKEVGEIIDQWK 361 (408)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~---g~~~~A~~~~~~~~ 361 (408)
.+++..+..+. +...|..+...|...|++++|.+.|++..+.... +...+..+...+... |+.++|.+.+++..
T Consensus 79 -~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al 155 (568)
T 2vsy_A 79 -LLQQASDAAPE-HPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPE-EPYITAQLLNWRRRLCDWRALDVLSAQVRAAV 155 (568)
T ss_dssp -HHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHH
T ss_pred -HHHHHHhcCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhhccccHHHHHHHHHHHH
Confidence 88888776543 6778899999999999999999999998876432 566788899999999 99999999999999
Q ss_pred hhC
Q 015370 362 QSA 364 (408)
Q Consensus 362 ~~~ 364 (408)
+.+
T Consensus 156 ~~~ 158 (568)
T 2vsy_A 156 AQG 158 (568)
T ss_dssp HHT
T ss_pred hcC
Confidence 876
No 114
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.89 E-value=1.3e-07 Score=77.93 Aligned_cols=46 Identities=11% Similarity=0.112 Sum_probs=19.4
Q ss_pred CHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHh----cCCHHHHHHHHHHHHh
Q 015370 172 WTEKAEELFERVKQSNLSFNALMYNEMMTLYMS----VGQVEKVALVVEEIKR 220 (408)
Q Consensus 172 ~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~----~g~~~~a~~~~~~m~~ 220 (408)
+.++|.+.|++..+.| +..++..|...|.. .+++++|...|++..+
T Consensus 68 ~~~~A~~~~~~A~~~g---~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~ 117 (212)
T 3rjv_A 68 DYPQARQLAEKAVEAG---SKSGEIVLARVLVNRQAGATDVAHAITLLQDAAR 117 (212)
T ss_dssp CHHHHHHHHHHHHHTT---CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTS
T ss_pred CHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHH
Confidence 4444444444444433 33344444444433 3444444444444443
No 115
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.87 E-value=1.5e-07 Score=82.44 Aligned_cols=202 Identities=7% Similarity=-0.070 Sum_probs=146.4
Q ss_pred cCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHH
Q 015370 169 GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 248 (408)
Q Consensus 169 ~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~ 248 (408)
..|++++|.+++++..+.. +.. + +...+++++|...|.+. ...|...|++++|..
T Consensus 3 ~~~~~~eA~~~~~~a~k~~-~~~---~------~~~~~~~~~A~~~~~~a---------------~~~~~~~g~~~~A~~ 57 (307)
T 2ifu_A 3 AAQKISEAHEHIAKAEKYL-KTS---F------MKWKPDYDSAASEYAKA---------------AVAFKNAKQLEQAKD 57 (307)
T ss_dssp CHHHHHHHHHHHHHHHHHH-CCC---S------SSCSCCHHHHHHHHHHH---------------HHHHHHTTCHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHc-ccc---c------cCCCCCHHHHHHHHHHH---------------HHHHHHcCCHHHHHH
Confidence 3577889999998877642 111 0 11157888888888765 456778899999999
Q ss_pred HHHHHhcC---CCCCC-CHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhccc---C--ccchHHHHHHHHHhcCCHHHHH
Q 015370 249 FLDEMSCD---SGGSD-DWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ---R--QWITYDFLIILYAGLGNKDKID 319 (408)
Q Consensus 249 ~~~~~~~~---~~~~~-~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~---~--~~~~~~~li~~~~~~~~~~~a~ 319 (408)
.|.+..+. .+..+ -..+|+.+...|.+.|++++|.. .+.+....... + ...+++.+...|.. |++++|+
T Consensus 58 ~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~-~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~ 135 (307)
T 2ifu_A 58 AYLQEAEAHANNRSLFHAAKAFEQAGMMLKDLQRMPEAVQ-YIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAV 135 (307)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGGHH-HHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHH
Confidence 99876542 11111 13468889999999999999999 88776654221 1 23577888888888 9999999
Q ss_pred HHHHHHHhccCCC-----ChhhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCC----HHHHHHHHHHHHhcCChHHHH
Q 015370 320 QIWKSLRMTKQKM-----TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD----ISACNRLLGAFSDVGLTEKAN 390 (408)
Q Consensus 320 ~~~~~m~~~~~~p-----~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~~----~~~~~~li~~~~~~g~~~~a~ 390 (408)
+.|++..+..... ...++..+...|.+.|++++|+..|++..+.....++ ...+..+..++...|++++|.
T Consensus 136 ~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~ 215 (307)
T 2ifu_A 136 HLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRADYVAAQ 215 (307)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcCCHHHHH
Confidence 9999876542211 1346778889999999999999999998763211111 236677777888889999999
Q ss_pred HHHHHHH
Q 015370 391 EFHMLLL 397 (408)
Q Consensus 391 ~~~~~m~ 397 (408)
..|++.+
T Consensus 216 ~~~~~al 222 (307)
T 2ifu_A 216 KCVRESY 222 (307)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 9999987
No 116
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.82 E-value=8.3e-07 Score=77.00 Aligned_cols=154 Identities=7% Similarity=-0.109 Sum_probs=73.8
Q ss_pred HHHHHhhcChHHHHHHHhcCCCCC---CC----HHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCC-CC----hhhHHHH
Q 015370 131 IDLMTKVFGIHSGERYFEGLPLSA---KT----SETYTALLHLYAGAKWTEKAEELFERVKQSNLS-FN----ALMYNEM 198 (408)
Q Consensus 131 i~~~~~~g~~~~a~~~~~~~~~~~---~~----~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~-p~----~~~~~~l 198 (408)
+..+...|++++|..++++..... ++ ...+..+...+...+++++|+..|++....... ++ ..+|+.+
T Consensus 82 i~~~~~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~l 161 (293)
T 3u3w_A 82 VIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAI 161 (293)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHH
Confidence 455556666666666666544321 11 112333455555555666666666666553211 11 1245666
Q ss_pred HHHHHhcCCHHHHHHHHHHHHh----C-CCCCC-HHHHHHHHHHHHhcCCHHHHHHHHHHHhcC---CCCCCC-HHHHHH
Q 015370 199 MTLYMSVGQVEKVALVVEEIKR----K-NVVPD-IFTYNLWISSCAATLNIDQVKKFLDEMSCD---SGGSDD-WVKYVN 268 (408)
Q Consensus 199 i~~~~~~g~~~~a~~~~~~m~~----~-g~~p~-~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~---~~~~~~-~~~~~~ 268 (408)
...|...|++++|+..|++..+ . +..+. ..++..+...|.+.|++++|...+++..+- .+..+. ..+|..
T Consensus 162 g~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 241 (293)
T 3u3w_A 162 ANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQ 241 (293)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHH
Confidence 6666666666666666665542 1 11111 124455555555555555555555544321 011111 334445
Q ss_pred HHHHHHHcCc-hhhhHH
Q 015370 269 LVNIYITASH-LVNAES 284 (408)
Q Consensus 269 li~~~~~~~~-~~~a~~ 284 (408)
+..+|.+.|+ +++|.+
T Consensus 242 lg~~~~~~g~~~~~A~~ 258 (293)
T 3u3w_A 242 RGECLRKLEYEEAEIED 258 (293)
T ss_dssp HHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHhCCcHHHHHH
Confidence 5555555552 355544
No 117
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.80 E-value=1.1e-07 Score=81.99 Aligned_cols=99 Identities=10% Similarity=-0.106 Sum_probs=55.6
Q ss_pred ChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHH
Q 015370 191 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 270 (408)
Q Consensus 191 ~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li 270 (408)
+...+..+...+.+.|++++|...|++....... +...|..+..++.+.|++++|...+++..+. .+.+...+..+.
T Consensus 3 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~--~p~~~~~~~~lg 79 (281)
T 2c2l_A 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALEL--DGQSVKAHFFLG 79 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS--CTTCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--CCCCHHHHHHHH
Confidence 3445555555556666666666666655553221 4455555555666666666666666665552 234455556666
Q ss_pred HHHHHcCchhhhHHHHHHHHHHh
Q 015370 271 NIYITASHLVNAESSTLVEAEKS 293 (408)
Q Consensus 271 ~~~~~~~~~~~a~~~~~~~~~~~ 293 (408)
.+|...|++++|.. .+......
T Consensus 80 ~~~~~~g~~~~A~~-~~~~al~l 101 (281)
T 2c2l_A 80 QCQLEMESYDEAIA-NLQRAYSL 101 (281)
T ss_dssp HHHHHTTCHHHHHH-HHHHHHHH
T ss_pred HHHHHcCCHHHHHH-HHHHHHHh
Confidence 66666666666666 55555443
No 118
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=98.79 E-value=6.5e-07 Score=73.44 Aligned_cols=126 Identities=13% Similarity=-0.002 Sum_probs=73.6
Q ss_pred HHHHHHHHHhhcChHHHHHHHhcCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcC
Q 015370 127 YATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 206 (408)
Q Consensus 127 ~~~li~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g 206 (408)
+..+...+...|++++|...|++.. .++..+|..+...|.+.|++++|.+.|++..... +.+..+|..+..+|...|
T Consensus 9 ~~~~g~~~~~~~~~~~A~~~~~~a~--~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~~lg~~~~~~~ 85 (213)
T 1hh8_A 9 LWNEGVLAADKKDWKGALDAFSAVQ--DPHSRICFNIGCMYTILKNMTEAEKAFTRSINRD-KHLAVAYFQRGMLYYQTE 85 (213)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTSS--SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHc--CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-ccchHHHHHHHHHHHHcc
Confidence 3444555666666666666666664 2456666666666666666666666666666543 334556666666666666
Q ss_pred CHHHHHHHHHHHHhCCCCCC---------------HHHHHHHHHHHHhcCCHHHHHHHHHHHhc
Q 015370 207 QVEKVALVVEEIKRKNVVPD---------------IFTYNLWISSCAATLNIDQVKKFLDEMSC 255 (408)
Q Consensus 207 ~~~~a~~~~~~m~~~g~~p~---------------~~~~~~ll~~~~~~g~~~~a~~~~~~~~~ 255 (408)
++++|...|++..+...... ...+..+..++...|++++|.+.|++..+
T Consensus 86 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 149 (213)
T 1hh8_A 86 KYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATS 149 (213)
T ss_dssp CHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 66666666666665422111 13444455555555555555555555544
No 119
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.77 E-value=8.2e-06 Score=71.49 Aligned_cols=230 Identities=11% Similarity=-0.006 Sum_probs=121.4
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcC-CHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHh
Q 015370 161 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG-QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 239 (408)
Q Consensus 161 ~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g-~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~ 239 (408)
+.+-....+.+..++|++++++++..+ +-+..+|+.--..+...| .+++++.+++.+.....+ +..+|+.-...+.+
T Consensus 58 ~~~r~~~~~~e~se~AL~lt~~~L~~n-P~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPK-ny~aW~hR~wlL~~ 135 (349)
T 3q7a_A 58 DYFRAIAAKEEKSERALELTEIIVRMN-PAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLK-SYQVWHHRLLLLDR 135 (349)
T ss_dssp HHHHHHHHTTCCSHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHhC-chhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHH
Confidence 333333344444556666666666654 334455666555555556 366666666666665443 45555555555554
Q ss_pred c-C-CHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchh--------hhHHHHHHHHHHhcccCccchHHHHHHHH
Q 015370 240 T-L-NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLV--------NAESSTLVEAEKSITQRQWITYDFLIILY 309 (408)
Q Consensus 240 ~-g-~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~--------~a~~~~~~~~~~~~~~~~~~~~~~li~~~ 309 (408)
. + ++++++++++++.+. .+-+..+|+--.-.+.+.|.++ ++++ ...++.+..+. |...|+.....+
T Consensus 136 l~~~~~~~EL~~~~k~L~~--dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe-~~~k~I~~dp~-N~SAW~~R~~lL 211 (349)
T 3q7a_A 136 ISPQDPVSEIEYIHGSLLP--DPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELD-WCNEMLRVDGR-NNSAWGWRWYLR 211 (349)
T ss_dssp HCCSCCHHHHHHHHHHTSS--CTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHH-HHHHHHHHCTT-CHHHHHHHHHHH
T ss_pred hcCCChHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHhccccccchhhHHHHHH-HHHHHHHhCCC-CHHHHHHHHHHH
Confidence 4 4 566666666666652 3445555555444444444444 5555 55555554433 566666666655
Q ss_pred HhcCC-------HHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCH--------------------HHHHHHHHHHHh
Q 015370 310 AGLGN-------KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL--------------------KEVGEIIDQWKQ 362 (408)
Q Consensus 310 ~~~~~-------~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~--------------------~~A~~~~~~~~~ 362 (408)
.+.+. ++++++.+++.....+. |...|+-+-..+.+.|+. .+......++..
T Consensus 212 ~~l~~~~~~~~~~~eELe~~~~aI~~~P~-n~SaW~Ylr~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (349)
T 3q7a_A 212 VSRPGAETSSRSLQDELIYILKSIHLIPH-NVSAWNYLRGFLKHFSLPLVPILPAILPYTASKLNPDIETVEAFGFPMPS 290 (349)
T ss_dssp TTSTTCCCCHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCSGGGHHHHGGGTC--------------CCCCC
T ss_pred HhccccccchHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHhcCCCcccccccccccccccccccchhHHHHHHHHHh
Confidence 55554 45666666655554322 444444444444443332 233333333332
Q ss_pred hC----CCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHH
Q 015370 363 SA----TSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 397 (408)
Q Consensus 363 ~~----~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~ 397 (408)
.. ...+....+..|+..|...|+.++|.++++.+.
T Consensus 291 ~~~~~~~~~~s~~al~~l~d~~~~~~~~~~a~~~~~~l~ 329 (349)
T 3q7a_A 291 DPLPEDTPLPVPLALEYLADSFIEQNRVDDAAKVFEKLS 329 (349)
T ss_dssp -CCCSSCCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred cccccccCCCcHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 21 112456666667777777777777777777764
No 120
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=98.76 E-value=7.1e-07 Score=73.21 Aligned_cols=91 Identities=14% Similarity=-0.024 Sum_probs=47.1
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHh
Q 015370 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 239 (408)
Q Consensus 160 ~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~ 239 (408)
+..+...+...|++++|.+.|++.. .|+..+|..+...|.+.|++++|...|++...... .+...+..+..++..
T Consensus 9 ~~~~g~~~~~~~~~~~A~~~~~~a~----~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~-~~~~~~~~lg~~~~~ 83 (213)
T 1hh8_A 9 LWNEGVLAADKKDWKGALDAFSAVQ----DPHSRICFNIGCMYTILKNMTEAEKAFTRSINRDK-HLAVAYFQRGMLYYQ 83 (213)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTSS----SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHc----CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc-cchHHHHHHHHHHHH
Confidence 3444455555555555555555442 33455555555555555555555555555554321 234445555555555
Q ss_pred cCCHHHHHHHHHHHhc
Q 015370 240 TLNIDQVKKFLDEMSC 255 (408)
Q Consensus 240 ~g~~~~a~~~~~~~~~ 255 (408)
.|++++|.+.|++..+
T Consensus 84 ~~~~~~A~~~~~~al~ 99 (213)
T 1hh8_A 84 TEKYDLAIKDLKEALI 99 (213)
T ss_dssp TTCHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHH
Confidence 5555555555555544
No 121
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=98.75 E-value=1.6e-07 Score=72.57 Aligned_cols=95 Identities=9% Similarity=0.043 Sum_probs=43.2
Q ss_pred hHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHH
Q 015370 301 TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAF 380 (408)
Q Consensus 301 ~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~li~~~ 380 (408)
.+..+...+.+.|++++|...|++.....+. +...|..+..+|...|++++|+..|++..+.. +.+...|..+..+|
T Consensus 38 ~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~-~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~--P~~~~~~~~lg~~~ 114 (151)
T 3gyz_A 38 DIYSYAYDFYNKGRIEEAEVFFRFLCIYDFY-NVDYIMGLAAIYQIKEQFQQAADLYAVAFALG--KNDYTPVFHTGQCQ 114 (151)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--SSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHccHHHHHHHHHHHHhhC--CCCcHHHHHHHHHH
Confidence 3444444444445555555555444443211 33344444444444555555555555444432 12334444444445
Q ss_pred HhcCChHHHHHHHHHHHh
Q 015370 381 SDVGLTEKANEFHMLLLQ 398 (408)
Q Consensus 381 ~~~g~~~~a~~~~~~m~~ 398 (408)
.+.|++++|...|++.++
T Consensus 115 ~~lg~~~eA~~~~~~al~ 132 (151)
T 3gyz_A 115 LRLKAPLKAKECFELVIQ 132 (151)
T ss_dssp HHTTCHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHH
Confidence 555555555555544444
No 122
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.74 E-value=1.5e-06 Score=75.35 Aligned_cols=167 Identities=6% Similarity=-0.121 Sum_probs=98.0
Q ss_pred hHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCH-----HHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCC--CCC--HH
Q 015370 194 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI-----FTYNLWISSCAATLNIDQVKKFLDEMSCDSGG--SDD--WV 264 (408)
Q Consensus 194 ~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~-----~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~--~~~--~~ 264 (408)
.+...+..+...|++++|.+.+++..+.....+. ..+..+...+...|++++|...+++..+...- .+. ..
T Consensus 77 ~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~ 156 (293)
T 2qfc_A 77 QFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLY 156 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHH
Confidence 3444455556666666666666655543221111 12233444556667777777777766542111 111 33
Q ss_pred HHHHHHHHHHHcCchhhhHHHHHHHHHHh---ccc-C--ccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCC-----C
Q 015370 265 KYVNLVNIYITASHLVNAESSTLVEAEKS---ITQ-R--QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM-----T 333 (408)
Q Consensus 265 ~~~~li~~~~~~~~~~~a~~~~~~~~~~~---~~~-~--~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p-----~ 333 (408)
+|+.+...|...|++++|.. .+.+..+. .+. + ...+++.+...|...|++++|.+.+++..+..... -
T Consensus 157 ~~~~lg~~y~~~~~~~~A~~-~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~ 235 (293)
T 2qfc_A 157 IENAIANIYAENGYLKKGID-LFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALI 235 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHH-HHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSH
T ss_pred HHHHHHHHHHHcCCHHHHHH-HHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHH
Confidence 66777777777777777777 66666522 111 1 12467777778888888888888887665432111 1
Q ss_pred hhhHHHHHHHHHhcCCHHHH-HHHHHHHH
Q 015370 334 SRNYICILSSYLMLGHLKEV-GEIIDQWK 361 (408)
Q Consensus 334 ~~~~~~li~~~~~~g~~~~A-~~~~~~~~ 361 (408)
..+|..+...|.+.|++++| ...+++..
T Consensus 236 ~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al 264 (293)
T 2qfc_A 236 GQLYYQRGECLRKLEYEEAEIEDAYKKAS 264 (293)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 44566777788888888888 66676654
No 123
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.73 E-value=3.8e-07 Score=74.08 Aligned_cols=159 Identities=8% Similarity=-0.046 Sum_probs=87.8
Q ss_pred HhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhcC---CCCC-CCHHHHHHHHHHHHHcCc
Q 015370 203 MSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCD---SGGS-DDWVKYVNLVNIYITASH 278 (408)
Q Consensus 203 ~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~---~~~~-~~~~~~~~li~~~~~~~~ 278 (408)
...|++++|.++++.+... ......++..+...+...|++++|...+++.... .+.. ....++..+...|...|+
T Consensus 3 ~~~g~~~~A~~~~~~~~~~-~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 81 (203)
T 3gw4_A 3 FEAHDYALAERQAQALLAH-PATASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGN 81 (203)
T ss_dssp ----CHHHHHHHHHHHHTS-TTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTC
T ss_pred cccccHHHHHHHHHHhcCC-hHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCC
Confidence 4567777777755444332 2224566677777777777777777777766541 1111 123446666677777777
Q ss_pred hhhhHHHHHHHHHHhcc----c--CccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCC-CCh----hhHHHHHHHHHhc
Q 015370 279 LVNAESSTLVEAEKSIT----Q--RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK-MTS----RNYICILSSYLML 347 (408)
Q Consensus 279 ~~~a~~~~~~~~~~~~~----~--~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~-p~~----~~~~~li~~~~~~ 347 (408)
+++|.. .+.+...... . .....+..+...+...|++++|...+++....... .+. .++..+...+...
T Consensus 82 ~~~A~~-~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~ 160 (203)
T 3gw4_A 82 WDAARR-CFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQE 160 (203)
T ss_dssp HHHHHH-HHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHH-HHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHC
Confidence 777777 5655544311 1 11234556666666677777777776665432111 111 1234555666666
Q ss_pred CCHHHHHHHHHHHHhh
Q 015370 348 GHLKEVGEIIDQWKQS 363 (408)
Q Consensus 348 g~~~~A~~~~~~~~~~ 363 (408)
|++++|.+.+++..+.
T Consensus 161 g~~~~A~~~~~~al~~ 176 (203)
T 3gw4_A 161 KNLLEAQQHWLRARDI 176 (203)
T ss_dssp TCHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHH
Confidence 7777776666665443
No 124
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.71 E-value=8.1e-07 Score=65.51 Aligned_cols=97 Identities=10% Similarity=0.091 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHH
Q 015370 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 236 (408)
Q Consensus 157 ~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~ 236 (408)
...|..+...+...|++++|.+.|+++.... +.+..++..+...+.+.|++++|...++++..... .+..++..+...
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~la~~ 86 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELD-PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDP-NNAEAWYNLGNA 86 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC-cCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCC-ccHHHHHHHHHH
Confidence 4556666666666666666666666666543 33455666666666666666666666666665432 245556666666
Q ss_pred HHhcCCHHHHHHHHHHHhc
Q 015370 237 CAATLNIDQVKKFLDEMSC 255 (408)
Q Consensus 237 ~~~~g~~~~a~~~~~~~~~ 255 (408)
+...|++++|...++++.+
T Consensus 87 ~~~~~~~~~A~~~~~~~~~ 105 (125)
T 1na0_A 87 YYKQGDYDEAIEYYQKALE 105 (125)
T ss_dssp HHHTTCHHHHHHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHH
Confidence 6666666666666666655
No 125
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.70 E-value=2.8e-06 Score=73.68 Aligned_cols=167 Identities=7% Similarity=-0.052 Sum_probs=96.1
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCC-----hhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCC---CCC--HH
Q 015370 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFN-----ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNV---VPD--IF 228 (408)
Q Consensus 159 ~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~-----~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~---~p~--~~ 228 (408)
.+...+..+...|++++|.+.+++..+..-..+ ...+..+...+...|++++|+..+++...... .+. ..
T Consensus 77 ~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~ 156 (293)
T 2qfc_A 77 QFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLY 156 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHH
Confidence 334445556666667777666666555421110 01233344555666677777777766654211 111 34
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHh---cCCCCCC--CHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccC-----c
Q 015370 229 TYNLWISSCAATLNIDQVKKFLDEMS---CDSGGSD--DWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR-----Q 298 (408)
Q Consensus 229 ~~~~ll~~~~~~g~~~~a~~~~~~~~---~~~~~~~--~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~-----~ 298 (408)
+++.+...|...|++++|...+++.. +..+..+ ...++..+...|.+.|++++|.. .+.+........ -
T Consensus 157 ~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~-~~~kal~~~~~~~~~~~~ 235 (293)
T 2qfc_A 157 IENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLY-QVNKAIEISCRINSMALI 235 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHHHHHTTBCSSH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHH-HHHHHHHHHHhcCcHHHH
Confidence 66666777777777777777777665 2111111 11466777777777777777777 666655432211 1
Q ss_pred cchHHHHHHHHHhcCCHHHH-HHHHHHHH
Q 015370 299 WITYDFLIILYAGLGNKDKI-DQIWKSLR 326 (408)
Q Consensus 299 ~~~~~~li~~~~~~~~~~~a-~~~~~~m~ 326 (408)
..+|..+...|.+.|++++| ...+++..
T Consensus 236 ~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al 264 (293)
T 2qfc_A 236 GQLYYQRGECLRKLEYEEAEIEDAYKKAS 264 (293)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 35667777788888888888 66666543
No 126
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.70 E-value=1.6e-06 Score=73.41 Aligned_cols=190 Identities=9% Similarity=-0.083 Sum_probs=131.3
Q ss_pred hcccHHHHHHHHHHHHhccCCCCChHHHHHH-------HHHHHhhcChHHHHHHHhcCCCCCC-------C---------
Q 015370 100 KSQRYKHALEISEWMVTHKEFVLSDSDYATR-------IDLMTKVFGIHSGERYFEGLPLSAK-------T--------- 156 (408)
Q Consensus 100 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l-------i~~~~~~g~~~~a~~~~~~~~~~~~-------~--------- 156 (408)
..++...|.+.|.+..+.. +-....|..+ ...+.+.++..+++..+..-....| +
T Consensus 18 ~~~d~~~A~~~F~~a~~~d--P~~~Daw~g~~a~g~~~~~~L~~~~r~~~a~~~~~~~l~l~p~~l~a~~~~~g~y~~~~ 95 (282)
T 4f3v_A 18 LPMSEARSLDLFTEITNYD--ESACDAWIGRIRCGDTDRVTLFRAWYSRRNFGQLSGSVQISMSTLNARIAIGGLYGDIT 95 (282)
T ss_dssp TTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHTTCCCHHHHHHHHHTGGGTTHHHHTTTCCGGGGCCEEECCTTTCCCE
T ss_pred cCCCHHHHHHHHHHHHHhC--hhhhHHHHhHHHccCCcHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhhccCCcccccc
Confidence 5788999999999998864 4456777777 5666666666666655554443211 1
Q ss_pred ------HHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCC--HH
Q 015370 157 ------SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPD--IF 228 (408)
Q Consensus 157 ------~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~--~~ 228 (408)
...+-.+...+...|++++|.++|+.+...+ |+......+...+.+.+++++|+..|+...... .|. ..
T Consensus 96 ~~v~~r~dl~LayA~~L~~~g~y~eA~~~l~~~~~~~--p~~~~~~~~a~l~~~~~r~~dA~~~l~~a~~~~-d~~~~~~ 172 (282)
T 4f3v_A 96 YPVTSPLAITMGFAACEAAQGNYADAMEALEAAPVAG--SEHLVAWMKAVVYGAAERWTDVIDQVKSAGKWP-DKFLAGA 172 (282)
T ss_dssp EECSSHHHHHHHHHHHHHHHTCHHHHHHHHTSSCCTT--CHHHHHHHHHHHHHHTTCHHHHHHHHTTGGGCS-CHHHHHH
T ss_pred cccCCHhHHHHHHHHHHHHCCCHHHHHHHHHHHHhcC--CchHHHHHHHHHHHHcCCHHHHHHHHHHhhccC-CcccHHH
Confidence 3345566777888899999999998887754 443366666667888899999998887554421 111 23
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCC--HHHHHHHHHHHHHcCchhhhHHHHHHHHHHhccc
Q 015370 229 TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD--WVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 296 (408)
Q Consensus 229 ~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~--~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~ 296 (408)
.+..+..++...|++++|+..|++... ....|. .........++.+.|+.++|.. .|+++....+.
T Consensus 173 a~~~LG~al~~LG~~~eAl~~l~~a~~-g~~~P~~~~da~~~~glaL~~lGr~deA~~-~l~~a~a~~P~ 240 (282)
T 4f3v_A 173 AGVAHGVAAANLALFTEAERRLTEAND-SPAGEACARAIAWYLAMARRSQGNESAAVA-LLEWLQTTHPE 240 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHT-STTTTTTHHHHHHHHHHHHHHHTCHHHHHH-HHHHHHHHSCC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHhc-CCCCccccHHHHHHHHHHHHHcCCHHHHHH-HHHHHHhcCCc
Confidence 566677888888899999888888875 233243 3356677777888888888888 78777766543
No 127
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=98.70 E-value=6.3e-07 Score=70.10 Aligned_cols=129 Identities=14% Similarity=0.001 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHH
Q 015370 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 236 (408)
Q Consensus 157 ~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~ 236 (408)
...|..+...+...|++++|...|++..... +.+..+|..+...+...|++++|...+++...... .+...+..+..+
T Consensus 13 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~-~~~~~~~~~a~~ 90 (166)
T 1a17_A 13 AEELKTQANDYFKAKDYENAIKFYSQAIELN-PSNAIYYGNRSLAYLRTECYGYALGDATRAIELDK-KYIKGYYRRAAS 90 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc-ccHHHHHHHHHH
Confidence 4456666677777777777777777766653 33566677777777777777777777777666432 245566666667
Q ss_pred HHhcCCHHHHHHHHHHHhcCCCCCCCHHHH--HHHHHHHHHcCchhhhHHHHHHHH
Q 015370 237 CAATLNIDQVKKFLDEMSCDSGGSDDWVKY--VNLVNIYITASHLVNAESSTLVEA 290 (408)
Q Consensus 237 ~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~--~~li~~~~~~~~~~~a~~~~~~~~ 290 (408)
+...|++++|...+++..+. .+.+...+ ......+.+.|++++|.. .+...
T Consensus 91 ~~~~~~~~~A~~~~~~a~~~--~p~~~~~~~~~~~~~~~~~~~~~~~A~~-~~~~~ 143 (166)
T 1a17_A 91 NMALGKFRAALRDYETVVKV--KPHDKDAKMKYQECNKIVKQKAFERAIA-GDEHK 143 (166)
T ss_dssp HHHTTCHHHHHHHHHHHHHH--STTCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
T ss_pred HHHhccHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHHHHH-cccch
Confidence 77777777777777776653 22233333 233333556666666666 44443
No 128
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=98.69 E-value=7.1e-07 Score=69.79 Aligned_cols=127 Identities=13% Similarity=-0.046 Sum_probs=71.8
Q ss_pred HHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHH
Q 015370 266 YVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYL 345 (408)
Q Consensus 266 ~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~ 345 (408)
+..+...+...|++++|.. .+.......+. +...|..+...+...|++++|.+.+++..+... .+...+..+...+.
T Consensus 16 ~~~~a~~~~~~~~~~~A~~-~~~~al~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~-~~~~~~~~~a~~~~ 92 (166)
T 1a17_A 16 LKTQANDYFKAKDYENAIK-FYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDK-KYIKGYYRRAASNM 92 (166)
T ss_dssp HHHHHHHHHHTTCHHHHHH-HHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHH-HHHHHHHhCCC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc-ccHHHHHHHHHHHH
Confidence 4455555666666666666 55555443322 445555666666666666666666666555432 23445556666666
Q ss_pred hcCCHHHHHHHHHHHHhhCCCCCCHHHHHH--HHHHHHhcCChHHHHHHHHHHH
Q 015370 346 MLGHLKEVGEIIDQWKQSATSDFDISACNR--LLGAFSDVGLTEKANEFHMLLL 397 (408)
Q Consensus 346 ~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~--li~~~~~~g~~~~a~~~~~~m~ 397 (408)
..|++++|...+++..+.. +.+...+.. +...+...|++++|.+.+++..
T Consensus 93 ~~~~~~~A~~~~~~a~~~~--p~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~ 144 (166)
T 1a17_A 93 ALGKFRAALRDYETVVKVK--PHDKDAKMKYQECNKIVKQKAFERAIAGDEHKR 144 (166)
T ss_dssp HTTCHHHHHHHHHHHHHHS--TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHHHHHcccchH
Confidence 6777777777777666643 223334422 2333556667777766666543
No 129
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=98.69 E-value=6.4e-07 Score=66.83 Aligned_cols=97 Identities=9% Similarity=0.012 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHH
Q 015370 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 236 (408)
Q Consensus 157 ~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~ 236 (408)
...+......|.+.|++++|++.|++.++.+ +.+..+|..+..+|.+.|++++|+..|++..+.... +...|..+..+
T Consensus 13 a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~ 90 (126)
T 4gco_A 13 AQEEKNKGNEYFKKGDYPTAMRHYNEAVKRD-PENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSK-FIKGYIRKAAC 90 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhh-hhHHHHHHHHH
Confidence 3455566666666666666666666666553 345566666666666666666666666666654322 45556666666
Q ss_pred HHhcCCHHHHHHHHHHHhc
Q 015370 237 CAATLNIDQVKKFLDEMSC 255 (408)
Q Consensus 237 ~~~~g~~~~a~~~~~~~~~ 255 (408)
+...|++++|.+.|++..+
T Consensus 91 ~~~~~~~~~A~~~~~~al~ 109 (126)
T 4gco_A 91 LVAMREWSKAQRAYEDALQ 109 (126)
T ss_dssp HHHTTCHHHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHH
Confidence 6666666666666666655
No 130
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.69 E-value=1.3e-07 Score=81.60 Aligned_cols=193 Identities=10% Similarity=0.009 Sum_probs=121.9
Q ss_pred ChhhHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHHHHhcCCCCC-CCHHHHHHHHH
Q 015370 87 TVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA-KTSETYTALLH 165 (408)
Q Consensus 87 ~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~-~~~~~~~~ll~ 165 (408)
+...+..+...+.+.|++++|+..|+...+.. +.+...|..+..++.+.|++++|...+++..... .+...+..+..
T Consensus 3 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~ 80 (281)
T 2c2l_A 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRN--PLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQ 80 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 45677788888899999999999999988864 4467888888889999999999999998877664 46788888899
Q ss_pred HHHcCCCHHHHHHHHHHHHhCCCCCC-hhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHH
Q 015370 166 LYAGAKWTEKAEELFERVKQSNLSFN-ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 244 (408)
Q Consensus 166 ~~~~~~~~~~A~~~~~~m~~~~~~p~-~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~ 244 (408)
+|...|++++|...|++..+.+ |+ ...+...+....+. .++.. +..........+......+ ..+ ..|+++
T Consensus 81 ~~~~~g~~~~A~~~~~~al~l~--p~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~i~~~l-~~l-~~~~~~ 152 (281)
T 2c2l_A 81 CQLEMESYDEAIANLQRAYSLA--KEQRLNFGDDIPSALRI---AKKKR-WNSIEERRIHQESELHSYL-TRL-IAAERE 152 (281)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHH--HHTTCCCCSHHHHHHHH---HHHHH-HHHHHHTCCCCCCHHHHHH-HHH-HHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhC--ccchhhHHHHHHHHHHH---HHHHH-HHHHHHHHHhhhHHHHHHH-HHH-HHHHHH
Confidence 9999999999999998877643 21 11111122222111 11111 1122222233343333333 222 257888
Q ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHc-CchhhhHHHHHHHHHH
Q 015370 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA-SHLVNAESSTLVEAEK 292 (408)
Q Consensus 245 ~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~-~~~~~a~~~~~~~~~~ 292 (408)
+|.+.++...+. .+.+......+...+.+. +.+++|.+ +|..+.+
T Consensus 153 ~A~~~~~~al~~--~p~~~~~~~~l~~~~~~~~~~~~~a~~-~f~~a~~ 198 (281)
T 2c2l_A 153 RELEECQRNHEG--HEDDGHIRAQQACIEAKHDKYMADMDE-LFSQVDE 198 (281)
T ss_dssp HHHTTTSGGGTT--TSCHHHHTHHHHHHHHHHHHHHHHHHH-HHHHSSC
T ss_pred HHHHHHHhhhcc--ccchhhhhhHHHHHHHHHHHHHHHHHH-HHHhhhc
Confidence 888888777662 233333334444444444 55667777 6655443
No 131
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.66 E-value=1e-06 Score=71.54 Aligned_cols=159 Identities=10% Similarity=-0.061 Sum_probs=111.8
Q ss_pred HHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHh----CCCCC-CHHHHHHHHHHHHhcC
Q 015370 167 YAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR----KNVVP-DIFTYNLWISSCAATL 241 (408)
Q Consensus 167 ~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~----~g~~p-~~~~~~~ll~~~~~~g 241 (408)
+...|++++|.++++.+... ......++..+...+...|++++|...+++... .+..| ...++..+...+...|
T Consensus 2 ~~~~g~~~~A~~~~~~~~~~-~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g 80 (203)
T 3gw4_A 2 AFEAHDYALAERQAQALLAH-PATASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAG 80 (203)
T ss_dssp -----CHHHHHHHHHHHHTS-TTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred ccccccHHHHHHHHHHhcCC-hHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcC
Confidence 34678999999966555442 223567888899999999999999999988765 22222 3456777788889999
Q ss_pred CHHHHHHHHHHHhcC---CCCCC--CHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccC-c----cchHHHHHHHHHh
Q 015370 242 NIDQVKKFLDEMSCD---SGGSD--DWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR-Q----WITYDFLIILYAG 311 (408)
Q Consensus 242 ~~~~a~~~~~~~~~~---~~~~~--~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~-~----~~~~~~li~~~~~ 311 (408)
++++|...+++..+. .+..+ ....+..+...+...|++++|.. .+.+........ + ..++..+...+..
T Consensus 81 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~-~~~~al~~~~~~~~~~~~~~~~~~la~~~~~ 159 (203)
T 3gw4_A 81 NWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQ-EYEKSLVYAQQADDQVAIACAFRGLGDLAQQ 159 (203)
T ss_dssp CHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHH-HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHH-HHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 999999999987663 12111 23457788889999999999999 777766532221 1 2345677888889
Q ss_pred cCCHHHHHHHHHHHHh
Q 015370 312 LGNKDKIDQIWKSLRM 327 (408)
Q Consensus 312 ~~~~~~a~~~~~~m~~ 327 (408)
.|++++|.+.+++..+
T Consensus 160 ~g~~~~A~~~~~~al~ 175 (203)
T 3gw4_A 160 EKNLLEAQQHWLRARD 175 (203)
T ss_dssp TTCHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHH
Confidence 9999999988886543
No 132
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=98.66 E-value=7.6e-07 Score=66.44 Aligned_cols=96 Identities=15% Similarity=0.025 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHH
Q 015370 265 KYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY 344 (408)
Q Consensus 265 ~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~ 344 (408)
.+......|.+.|++++|+. .+.+..+..+. +...|..+..+|.+.|++++|++.|++..+.... +...|..+..++
T Consensus 15 ~~~~~G~~~~~~g~~~~A~~-~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~ 91 (126)
T 4gco_A 15 EEKNKGNEYFKKGDYPTAMR-HYNEAVKRDPE-NAILYSNRAACLTKLMEFQRALDDCDTCIRLDSK-FIKGYIRKAACL 91 (126)
T ss_dssp HHHHHHHHHHHTTCHHHHHH-HHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHH-HHHHHHHhCCC-CHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhh-hhHHHHHHHHHH
Confidence 35555556666666666666 55555444322 4455555555666666666666666655544321 344555555556
Q ss_pred HhcCCHHHHHHHHHHHHhh
Q 015370 345 LMLGHLKEVGEIIDQWKQS 363 (408)
Q Consensus 345 ~~~g~~~~A~~~~~~~~~~ 363 (408)
...|++++|.+.|++..+.
T Consensus 92 ~~~~~~~~A~~~~~~al~l 110 (126)
T 4gco_A 92 VAMREWSKAQRAYEDALQV 110 (126)
T ss_dssp HHTTCHHHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHHHH
Confidence 6666666666666665553
No 133
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.65 E-value=5.2e-07 Score=66.58 Aligned_cols=93 Identities=12% Similarity=0.105 Sum_probs=42.5
Q ss_pred HHHHHHHHHhhcChHHHHHHHhcCCCC-CCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhc
Q 015370 127 YATRIDLMTKVFGIHSGERYFEGLPLS-AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSV 205 (408)
Q Consensus 127 ~~~li~~~~~~g~~~~a~~~~~~~~~~-~~~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~ 205 (408)
+..+...+...|++++|.++|+++... +.+..++..+...+.+.|++++|...|+++.... +.+..++..+...+...
T Consensus 12 ~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~la~~~~~~ 90 (125)
T 1na0_A 12 WYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELD-PNNAEAWYNLGNAYYKQ 90 (125)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC-CccHHHHHHHHHHHHHh
Confidence 333333344444444444444333222 1233444444455555555555555555544432 22344555555555555
Q ss_pred CCHHHHHHHHHHHHh
Q 015370 206 GQVEKVALVVEEIKR 220 (408)
Q Consensus 206 g~~~~a~~~~~~m~~ 220 (408)
|++++|...++++.+
T Consensus 91 ~~~~~A~~~~~~~~~ 105 (125)
T 1na0_A 91 GDYDEAIEYYQKALE 105 (125)
T ss_dssp TCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHH
Confidence 555555555555544
No 134
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.64 E-value=1.7e-05 Score=69.49 Aligned_cols=215 Identities=11% Similarity=0.054 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhc-ChHHHHHHHhcCCCC-CCCHHHHHHHHHHHHcC-C-CHHHHHHHH
Q 015370 105 KHALEISEWMVTHKEFVLSDSDYATRIDLMTKVF-GIHSGERYFEGLPLS-AKTSETYTALLHLYAGA-K-WTEKAEELF 180 (408)
Q Consensus 105 ~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g-~~~~a~~~~~~~~~~-~~~~~~~~~ll~~~~~~-~-~~~~A~~~~ 180 (408)
++|+++++.+.... +-+...|+.--.++...| .+++++++++.+... +.+..+|+.-...+.+. + +.+++++++
T Consensus 71 e~AL~lt~~~L~~n--P~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~~~ 148 (349)
T 3q7a_A 71 ERALELTEIIVRMN--PAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEIEYI 148 (349)
T ss_dssp HHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHHHHH
T ss_pred HHHHHHHHHHHHhC--chhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHHHHH
Confidence 34555555555432 222334444444444444 355555555544433 23444454444444443 3 445555555
Q ss_pred HHHHhCCCCCChhhHHHHHHHHHhcCCHH--------HHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCC-------HHH
Q 015370 181 ERVKQSNLSFNALMYNEMMTLYMSVGQVE--------KVALVVEEIKRKNVVPDIFTYNLWISSCAATLN-------IDQ 245 (408)
Q Consensus 181 ~~m~~~~~~p~~~~~~~li~~~~~~g~~~--------~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~-------~~~ 245 (408)
+++.+.. +-|..+|+--...+.+.|.++ ++++.++++.+..+. |..+|+-....+.+.++ +++
T Consensus 149 ~k~L~~d-pkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~-N~SAW~~R~~lL~~l~~~~~~~~~~~e 226 (349)
T 3q7a_A 149 HGSLLPD-PKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGR-NNSAWGWRWYLRVSRPGAETSSRSLQD 226 (349)
T ss_dssp HHHTSSC-TTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHTTSTTCCCCHHHHHH
T ss_pred HHHHHhC-CCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHhccccccchHHHHH
Confidence 5555443 234444444444443333333 555555555554332 44445444444444443 345
Q ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCch--------------------hhhHHHHHHHHHHhc-----ccCccc
Q 015370 246 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL--------------------VNAESSTLVEAEKSI-----TQRQWI 300 (408)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~--------------------~~a~~~~~~~~~~~~-----~~~~~~ 300 (408)
+++.++++.. ..+-|...|+-+-..+.+.|+. ..... +...+.... ..++..
T Consensus 227 ELe~~~~aI~--~~P~n~SaW~Ylr~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~ 303 (349)
T 3q7a_A 227 ELIYILKSIH--LIPHNVSAWNYLRGFLKHFSLPLVPILPAILPYTASKLNPDIETVEA-FGFPMPSDPLPEDTPLPVPL 303 (349)
T ss_dssp HHHHHHHHHH--HCTTCHHHHHHHHHHHHHTTCCSGGGHHHHGGGTC---------------CCCCC-CCCSSCCSCCHH
T ss_pred HHHHHHHHHH--hCCCCHHHHHHHHHHHHhcCCCcccccccccccccccccccchhHHH-HHHHHHhcccccccCCCcHH
Confidence 5555554444 1234444444444444443332 11222 222221111 123445
Q ss_pred hHHHHHHHHHhcCCHHHHHHHHHHHH
Q 015370 301 TYDFLIILYAGLGNKDKIDQIWKSLR 326 (408)
Q Consensus 301 ~~~~li~~~~~~~~~~~a~~~~~~m~ 326 (408)
.+..|+..|...|+.++|.++++.+.
T Consensus 304 al~~l~d~~~~~~~~~~a~~~~~~l~ 329 (349)
T 3q7a_A 304 ALEYLADSFIEQNRVDDAAKVFEKLS 329 (349)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 55666666666666666776666654
No 135
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.64 E-value=1.1e-06 Score=65.44 Aligned_cols=119 Identities=11% Similarity=-0.006 Sum_probs=70.8
Q ss_pred CHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHH
Q 015370 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235 (408)
Q Consensus 156 ~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~ 235 (408)
+...+..+...+...|++++|...|++..... +.+...|..+...+...|++++|...++....... .+...+..+..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~~~~ 88 (131)
T 2vyi_A 11 EAERLKTEGNEQMKVENFEAAVHFYGKAIELN-PANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDP-AYSKAYGRMGL 88 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHccCHHHHHHHHHHHHHcC-CCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCc-cCHHHHHHHHH
Confidence 34556666666666666777766666666543 33555666666666666666666666666665422 23555666666
Q ss_pred HHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCc
Q 015370 236 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278 (408)
Q Consensus 236 ~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~ 278 (408)
.+...|++++|...+++..+. .+.+...+..+..++.+.|+
T Consensus 89 ~~~~~~~~~~A~~~~~~~~~~--~p~~~~~~~~l~~~~~~~~~ 129 (131)
T 2vyi_A 89 ALSSLNKHVEAVAYYKKALEL--DPDNETYKSNLKIAELKLRE 129 (131)
T ss_dssp HHHHTTCHHHHHHHHHHHHHH--STTCHHHHHHHHHHHHHHTT
T ss_pred HHHHhCCHHHHHHHHHHHHhc--CccchHHHHHHHHHHHHHhc
Confidence 666666666666666666552 23344555555555555544
No 136
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=98.63 E-value=1.7e-07 Score=72.33 Aligned_cols=98 Identities=10% Similarity=-0.061 Sum_probs=74.9
Q ss_pred CHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHH
Q 015370 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235 (408)
Q Consensus 156 ~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~ 235 (408)
+...+..+...+.+.|++++|...|++....+ |.+...|..+..+|...|++++|...|++....... +...|..+..
T Consensus 35 ~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~-P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~-~~~~~~~lg~ 112 (151)
T 3gyz_A 35 MMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYD-FYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKN-DYTPVFHTGQ 112 (151)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSS-CCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCC-CcHHHHHHHH
Confidence 46677777788888888888888888887765 446777888888888888888888888888775432 4566777777
Q ss_pred HHHhcCCHHHHHHHHHHHhc
Q 015370 236 SCAATLNIDQVKKFLDEMSC 255 (408)
Q Consensus 236 ~~~~~g~~~~a~~~~~~~~~ 255 (408)
+|...|++++|...|++..+
T Consensus 113 ~~~~lg~~~eA~~~~~~al~ 132 (151)
T 3gyz_A 113 CQLRLKAPLKAKECFELVIQ 132 (151)
T ss_dssp HHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHH
Confidence 88888888888888888776
No 137
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.61 E-value=9.9e-07 Score=66.00 Aligned_cols=97 Identities=10% Similarity=-0.025 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHH
Q 015370 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 236 (408)
Q Consensus 157 ~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~ 236 (408)
...|..+...+...|++++|...|++..+.. +.+..++..+...+...|++++|...+++..+... .+...+..+..+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~-~~~~~~~~la~~ 93 (133)
T 2lni_A 16 ALMVKNKGNECFQKGDYPQAMKHYTEAIKRN-PKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEP-TFIKGYTRKAAA 93 (133)
T ss_dssp HHHHHHHHHHHHHTTCSHHHHHHHHHHHTTC-TTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-CCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-CchHHHHHHHHH
Confidence 4555555555555555555555555555543 22445555555555555555555555555554322 134455555555
Q ss_pred HHhcCCHHHHHHHHHHHhc
Q 015370 237 CAATLNIDQVKKFLDEMSC 255 (408)
Q Consensus 237 ~~~~g~~~~a~~~~~~~~~ 255 (408)
+...|++++|.+.|++..+
T Consensus 94 ~~~~~~~~~A~~~~~~~~~ 112 (133)
T 2lni_A 94 LEAMKDYTKAMDVYQKALD 112 (133)
T ss_dssp HHHTTCHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHHH
Confidence 5555555555555555544
No 138
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.60 E-value=7.9e-07 Score=66.57 Aligned_cols=116 Identities=9% Similarity=-0.099 Sum_probs=73.5
Q ss_pred hHHHHHHHHHHHhhcChHHHHHHHhcCCCCC-CCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHH
Q 015370 124 DSDYATRIDLMTKVFGIHSGERYFEGLPLSA-KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY 202 (408)
Q Consensus 124 ~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~-~~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~ 202 (408)
...+..+...+...|++++|...|++..... .+..++..+...+...|++++|.+.+++..+.. +.+...+..+...+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~la~~~ 94 (133)
T 2lni_A 16 ALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLE-PTFIKGYTRKAAAL 94 (133)
T ss_dssp HHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC-CCchHHHHHHHHHH
Confidence 4556666666666677777776666654443 356667777777777777777777777776653 33566777777777
Q ss_pred HhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcC
Q 015370 203 MSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL 241 (408)
Q Consensus 203 ~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g 241 (408)
.+.|++++|...|++..+.... +...+..+..++...|
T Consensus 95 ~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~l~~~~~~~~ 132 (133)
T 2lni_A 95 EAMKDYTKAMDVYQKALDLDSS-CKEAADGYQRCMMAQY 132 (133)
T ss_dssp HHTTCHHHHHHHHHHHHHHCGG-GTHHHHHHHHHHHHHT
T ss_pred HHHhhHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHhc
Confidence 7777777777777777654221 2344444444444433
No 139
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=98.59 E-value=5.8e-05 Score=70.35 Aligned_cols=205 Identities=12% Similarity=0.057 Sum_probs=131.4
Q ss_pred HHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 015370 174 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253 (408)
Q Consensus 174 ~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~ 253 (408)
+.+..+|++++... +-+...|-..+..+.+.|+.++|..+|++.... |+...... .|....+.++. ++.+
T Consensus 196 ~Rv~~~ye~al~~~-p~~~~lW~~ya~~~~~~~~~~~ar~i~erAi~~---P~~~~l~~---~y~~~~e~~~~---~~~l 265 (493)
T 2uy1_A 196 SRMHFIHNYILDSF-YYAEEVYFFYSEYLIGIGQKEKAKKVVERGIEM---SDGMFLSL---YYGLVMDEEAV---YGDL 265 (493)
T ss_dssp HHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CCSSHHHH---HHHHHTTCTHH---HHHH
T ss_pred HHHHHHHHHHHHcC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhC---CCcHHHHH---HHHhhcchhHH---HHHH
Confidence 34667788877653 456778888888888889999999999998876 33322111 22222222222 2222
Q ss_pred hcCC---C-----C---CCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHh-cCCHHHHHHH
Q 015370 254 SCDS---G-----G---SDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAG-LGNKDKIDQI 321 (408)
Q Consensus 254 ~~~~---~-----~---~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~-~~~~~~a~~~ 321 (408)
.+.. . . .....+|...+..+.+.+..+.|.. ++... . .+..+...|......-.. .++.+.|..+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~lw~~y~~~~~r~~~~~~AR~-i~~~A-~-~~~~~~~v~i~~A~lE~~~~~d~~~ar~i 342 (493)
T 2uy1_A 266 KRKYSMGEAESAEKVFSKELDLLRINHLNYVLKKRGLELFRK-LFIEL-G-NEGVGPHVFIYCAFIEYYATGSRATPYNI 342 (493)
T ss_dssp HHHTC----------CHHHHHHHHHHHHHHHHHHHCHHHHHH-HHHHH-T-TSCCCHHHHHHHHHHHHHHHCCSHHHHHH
T ss_pred HHHHHhhccchhhhhcccccHHHHHHHHHHHHHcCCHHHHHH-HHHHh-h-CCCCChHHHHHHHHHHHHHCCChHHHHHH
Confidence 2110 0 0 1112446677777777888999999 88887 2 222233334322222222 3479999999
Q ss_pred HHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHh
Q 015370 322 WKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398 (408)
Q Consensus 322 ~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~ 398 (408)
|+...+.-.. +...+...++...+.|+.+.|..+|++.. .....|...+.--...|+.+.+..+++++.+
T Consensus 343 fe~al~~~~~-~~~~~~~yid~e~~~~~~~~aR~l~er~~------k~~~lw~~~~~fE~~~G~~~~~r~v~~~~~~ 412 (493)
T 2uy1_A 343 FSSGLLKHPD-STLLKEEFFLFLLRIGDEENARALFKRLE------KTSRMWDSMIEYEFMVGSMELFRELVDQKMD 412 (493)
T ss_dssp HHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHSC------CBHHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHH------HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 9988775322 23345567777788999999999999862 2577888888877888999999998888764
No 140
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=98.59 E-value=1.4e-06 Score=69.18 Aligned_cols=122 Identities=11% Similarity=0.059 Sum_probs=86.5
Q ss_pred HhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHH-HHhcCCH-
Q 015370 238 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIIL-YAGLGNK- 315 (408)
Q Consensus 238 ~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~-~~~~~~~- 315 (408)
...|++++|...+++..+. .+.+...+..+...|...|++++|.. .+.......+. +...+..+... +...|++
T Consensus 21 ~~~~~~~~A~~~~~~al~~--~p~~~~~~~~lg~~~~~~~~~~~A~~-~~~~al~~~p~-~~~~~~~la~~l~~~~~~~~ 96 (177)
T 2e2e_A 21 ASQQNPEAQLQALQDKIRA--NPQNSEQWALLGEYYLWQNDYSNSLL-AYRQALQLRGE-NAELYAALATVLYYQASQHM 96 (177)
T ss_dssp C-----CCCCHHHHHHHHH--CCSCHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHHHCS-CHHHHHHHHHHHHHHTTTCC
T ss_pred hhccCHHHHHHHHHHHHHh--CCCcHHHHHHHHHHHHHcCCHHHHHH-HHHHHHHcCCC-CHHHHHHHHHHHHHhcCCcc
Confidence 4567788888888877763 34567778888888888888888888 77777665543 55666677777 6677887
Q ss_pred -HHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhhC
Q 015370 316 -DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364 (408)
Q Consensus 316 -~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~ 364 (408)
++|...+++..+.... +...+..+...+...|++++|...|++..+..
T Consensus 97 ~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 145 (177)
T 2e2e_A 97 TAQTRAMIDKALALDSN-EITALMLLASDAFMQANYAQAIELWQKVMDLN 145 (177)
T ss_dssp CHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred hHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcccHHHHHHHHHHHHhhC
Confidence 8888888887766422 45566777778888888888888888887754
No 141
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=98.58 E-value=2.5e-07 Score=73.62 Aligned_cols=118 Identities=8% Similarity=0.016 Sum_probs=63.3
Q ss_pred cccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHHHHhcCCCC-CCCHHHHHHHHHH-HHcCCCH--HHH
Q 015370 101 SQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLS-AKTSETYTALLHL-YAGAKWT--EKA 176 (408)
Q Consensus 101 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~-~~~~~~~~~ll~~-~~~~~~~--~~A 176 (408)
.|++++|++.++...+.. +.+...+..+...+...|++++|...|++.... +.+...+..+..+ +...|++ ++|
T Consensus 23 ~~~~~~A~~~~~~al~~~--p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A 100 (177)
T 2e2e_A 23 QQNPEAQLQALQDKIRAN--PQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQT 100 (177)
T ss_dssp ----CCCCHHHHHHHHHC--CSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHH
T ss_pred ccCHHHHHHHHHHHHHhC--CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHH
Confidence 455555555555555542 334455555555555556666665555554433 2345555555555 5555665 666
Q ss_pred HHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhC
Q 015370 177 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 221 (408)
Q Consensus 177 ~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~ 221 (408)
...|++....+ +.+...+..+...|...|++++|...|++..+.
T Consensus 101 ~~~~~~al~~~-p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 144 (177)
T 2e2e_A 101 RAMIDKALALD-SNEITALMLLASDAFMQANYAQAIELWQKVMDL 144 (177)
T ss_dssp HHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhC-CCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhh
Confidence 66666655543 234555566666666666666666666665553
No 142
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=98.58 E-value=7.1e-05 Score=69.76 Aligned_cols=313 Identities=10% Similarity=-0.004 Sum_probs=158.3
Q ss_pred CcHHHHHHHHHHcCCCCChhhHHHHHHHHHhccc-HHHHHHHHHHHHhccCC-CCChHHHHHHHHHHH----hhcChHHH
Q 015370 70 RSATNVIQRWVSEGNQATVSELRHILKELRKSQR-YKHALEISEWMVTHKEF-VLSDSDYATRIDLMT----KVFGIHSG 143 (408)
Q Consensus 70 ~~a~~~l~~~~~~g~~~~~~~~~~li~~~~~~~~-~~~a~~~~~~~~~~~~~-~~~~~~~~~li~~~~----~~g~~~~a 143 (408)
+.+..+|++.+.. .|+...|...++-..+.+. .+....+|+.....-+. ..+...|...+..+. ..++++.+
T Consensus 31 e~~~~iferal~~--~ps~~LW~~Y~~f~~~~~~~~~~i~~~fe~al~~vg~d~~s~~iW~~Yi~f~~~~~~~~~~~~~v 108 (493)
T 2uy1_A 31 RSLESLFGRCLKK--SYNLDLWMLYIEYVRKVSQKKFKLYEVYEFTLGQFENYWDSYGLYKEYIEEEGKIEDEQTRIEKI 108 (493)
T ss_dssp HHHHHHHHHHSTT--CCCHHHHHHHHHHHHHHC----CTHHHHHHHHHHSTTCTTCHHHHHHHHHHTSSCSSHHHHHHHH
T ss_pred HHHHHHHHHHhcc--CCCHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHhchhhhHHHHHH
Confidence 4455556555542 3566666666665555542 23455566665543111 224455555554432 23556666
Q ss_pred HHHHhcCCCCCCC--HHHHHHHHHHHHc-------------CCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcC--
Q 015370 144 ERYFEGLPLSAKT--SETYTALLHLYAG-------------AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG-- 206 (408)
Q Consensus 144 ~~~~~~~~~~~~~--~~~~~~ll~~~~~-------------~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g-- 206 (408)
.++|+.....++. ...|......-.. .+.+..|..+++++...--..+...|...+.--...+
T Consensus 109 R~iy~rAL~~P~~~~~~lw~~Y~~fE~~~~~~~~~~~~~~~~~~y~~ar~~y~~~~~~~~~~s~~~W~~y~~~E~~~~~~ 188 (493)
T 2uy1_A 109 RNGYMRALQTPMGSLSELWKDFENFELELNKITGKKIVGDTLPIFQSSFQRYQQIQPLIRGWSVKNAARLIDLEMENGMK 188 (493)
T ss_dssp HHHHHHHHTSCCTTHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSHHHHHHHHHHHHTCTTC
T ss_pred HHHHHHHHhChhhhHHHHHHHHHHHHHHhccccHHHHHHHHhHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHhcCCcc
Confidence 6666665443211 1222222221110 0112223333333332100012234444443322211
Q ss_pred C-----HHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhh
Q 015370 207 Q-----VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 281 (408)
Q Consensus 207 ~-----~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~ 281 (408)
- .+.+..+|+++.... +.+...|...+.-+.+.|+++.|..++++.... +.+...+. .|....+.++
T Consensus 189 ~~~~~~~~Rv~~~ye~al~~~-p~~~~lW~~ya~~~~~~~~~~~ar~i~erAi~~---P~~~~l~~----~y~~~~e~~~ 260 (493)
T 2uy1_A 189 LGGRPHESRMHFIHNYILDSF-YYAEEVYFFYSEYLIGIGQKEKAKKVVERGIEM---SDGMFLSL----YYGLVMDEEA 260 (493)
T ss_dssp CCHHHHHHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CCSSHHHH----HHHHHTTCTH
T ss_pred CcchhhHHHHHHHHHHHHHcC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhC---CCcHHHHH----HHHhhcchhH
Confidence 0 344666777777643 234666666677777788888888888888872 44433332 2222211111
Q ss_pred hHHHHHHHH--HH------hcccCccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHH-hcCCHHH
Q 015370 282 AESSTLVEA--EK------SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYL-MLGHLKE 352 (408)
Q Consensus 282 a~~~~~~~~--~~------~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~-~~g~~~~ 352 (408)
..+.+.... .. .........|...+....+.++.+.|..+|++. .. ...+...|......-. ..++.+.
T Consensus 261 ~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y~~~~~r~~~~~~AR~i~~~A-~~-~~~~~~v~i~~A~lE~~~~~d~~~ 338 (493)
T 2uy1_A 261 VYGDLKRKYSMGEAESAEKVFSKELDLLRINHLNYVLKKRGLELFRKLFIEL-GN-EGVGPHVFIYCAFIEYYATGSRAT 338 (493)
T ss_dssp HHHHHHHHTC----------CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH-TT-SCCCHHHHHHHHHHHHHHHCCSHH
T ss_pred HHHHHHHHHHhhccchhhhhcccccHHHHHHHHHHHHHcCCHHHHHHHHHHh-hC-CCCChHHHHHHHHHHHHHCCChHH
Confidence 111011110 00 000112245666666666778899999999987 22 1123333432222212 2347999
Q ss_pred HHHHHHHHHhhCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 015370 353 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 396 (408)
Q Consensus 353 A~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m 396 (408)
|..+|+...+.. +.+...|...++...+.|+.+.|..+|+++
T Consensus 339 ar~ife~al~~~--~~~~~~~~~yid~e~~~~~~~~aR~l~er~ 380 (493)
T 2uy1_A 339 PYNIFSSGLLKH--PDSTLLKEEFFLFLLRIGDEENARALFKRL 380 (493)
T ss_dssp HHHHHHHHHHHC--TTCHHHHHHHHHHHHHHTCHHHHHHHHHHS
T ss_pred HHHHHHHHHHHC--CCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 999999988864 224555666777778889999999888875
No 143
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.58 E-value=2.8e-06 Score=63.14 Aligned_cols=119 Identities=12% Similarity=-0.099 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHH
Q 015370 263 WVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILS 342 (408)
Q Consensus 263 ~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~ 342 (408)
...+..+...+...|++++|.. .+.......+ .+...|..+...+...|++++|.+.+++...... .+...+..+..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~A~~-~~~~~~~~~~-~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~~~~ 88 (131)
T 2vyi_A 12 AERLKTEGNEQMKVENFEAAVH-FYGKAIELNP-ANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDP-AYSKAYGRMGL 88 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHH-HHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHccCHHHHHH-HHHHHHHcCC-CCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCc-cCHHHHHHHHH
Confidence 4455666666667777777777 6666555432 2455666667777777777777777777665532 23556666777
Q ss_pred HHHhcCCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHhcCCh
Q 015370 343 SYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLT 386 (408)
Q Consensus 343 ~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~ 386 (408)
.+...|++++|...+++..+.. +.+...+..+..++.+.|++
T Consensus 89 ~~~~~~~~~~A~~~~~~~~~~~--p~~~~~~~~l~~~~~~~~~~ 130 (131)
T 2vyi_A 89 ALSSLNKHVEAVAYYKKALELD--PDNETYKSNLKIAELKLREA 130 (131)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHS--TTCHHHHHHHHHHHHHHTTC
T ss_pred HHHHhCCHHHHHHHHHHHHhcC--ccchHHHHHHHHHHHHHhcC
Confidence 7778888888888888777654 33566676777777766654
No 144
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=98.57 E-value=3.4e-07 Score=70.55 Aligned_cols=98 Identities=9% Similarity=-0.062 Sum_probs=59.9
Q ss_pred CHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHH
Q 015370 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235 (408)
Q Consensus 156 ~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~ 235 (408)
+...+..+...+.+.|++++|...|++....+ +.+...|..+..+|...|++++|...|++....... +...+..+..
T Consensus 20 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~-~~~~~~~lg~ 97 (148)
T 2vgx_A 20 TLEQLYSLAFNQYQSGXYEDAHXVFQALCVLD-HYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIX-EPRFPFHAAE 97 (148)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCChHHHHHHHHHHHHcC-cccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC-CchHHHHHHH
Confidence 34555566666666666666666666666543 335566666666666666666666666666654322 3455555666
Q ss_pred HHHhcCCHHHHHHHHHHHhc
Q 015370 236 SCAATLNIDQVKKFLDEMSC 255 (408)
Q Consensus 236 ~~~~~g~~~~a~~~~~~~~~ 255 (408)
++...|++++|...|++..+
T Consensus 98 ~~~~~g~~~~A~~~~~~al~ 117 (148)
T 2vgx_A 98 CLLQXGELAEAESGLFLAQE 117 (148)
T ss_dssp HHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHH
Confidence 66666666666666666554
No 145
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.55 E-value=4.3e-06 Score=70.84 Aligned_cols=197 Identities=8% Similarity=-0.051 Sum_probs=122.6
Q ss_pred cCCCHHHHHHHHHHHHhCCCCCChhhHHHH-------HHHHHhcCCHHHHHHHHHHHHhCCCCCC---------------
Q 015370 169 GAKWTEKAEELFERVKQSNLSFNALMYNEM-------MTLYMSVGQVEKVALVVEEIKRKNVVPD--------------- 226 (408)
Q Consensus 169 ~~~~~~~A~~~~~~m~~~~~~p~~~~~~~l-------i~~~~~~g~~~~a~~~~~~m~~~g~~p~--------------- 226 (408)
..++.+.|.+.|.+..... +-....|..+ ...+...++..+++..++.-.+ +.|+
T Consensus 18 ~~~d~~~A~~~F~~a~~~d-P~~~Daw~g~~a~g~~~~~~L~~~~r~~~a~~~~~~~l~--l~p~~l~a~~~~~g~y~~~ 94 (282)
T 4f3v_A 18 LPMSEARSLDLFTEITNYD-ESACDAWIGRIRCGDTDRVTLFRAWYSRRNFGQLSGSVQ--ISMSTLNARIAIGGLYGDI 94 (282)
T ss_dssp TTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHTTCCCHHHHHHHHHTGGGTTHHHHTTT--CCGGGGCCEEECCTTTCCC
T ss_pred cCCCHHHHHHHHHHHHHhC-hhhhHHHHhHHHccCCcHHHHHHHHHHHHHHHHHHHHhc--CChhhhhhhhccCCccccc
Confidence 5678888888888887765 3356677766 4555555555555555544433 1221
Q ss_pred -------HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccC--
Q 015370 227 -------IFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR-- 297 (408)
Q Consensus 227 -------~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~-- 297 (408)
....-.+...+...|++++|.++|+.+... + |+....-.+...+.+.+++++|+. .+....... .|
T Consensus 95 ~~~v~~r~dl~LayA~~L~~~g~y~eA~~~l~~~~~~-~--p~~~~~~~~a~l~~~~~r~~dA~~-~l~~a~~~~-d~~~ 169 (282)
T 4f3v_A 95 TYPVTSPLAITMGFAACEAAQGNYADAMEALEAAPVA-G--SEHLVAWMKAVVYGAAERWTDVID-QVKSAGKWP-DKFL 169 (282)
T ss_dssp EEECSSHHHHHHHHHHHHHHHTCHHHHHHHHTSSCCT-T--CHHHHHHHHHHHHHHTTCHHHHHH-HHTTGGGCS-CHHH
T ss_pred ccccCCHhHHHHHHHHHHHHCCCHHHHHHHHHHHHhc-C--CchHHHHHHHHHHHHcCCHHHHHH-HHHHhhccC-Cccc
Confidence 122334556677788888888888877762 2 333355566667888888888888 665322111 11
Q ss_pred ccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCC--hhhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCCHHHHHH
Q 015370 298 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT--SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNR 375 (408)
Q Consensus 298 ~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~--~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~ 375 (408)
....+..+..++...|++++|+..|++.......|. .........++.+.|+.++|..+|+++.... |+...+..
T Consensus 170 ~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~---P~~~~~~a 246 (282)
T 4f3v_A 170 AGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQTTH---PEPKVAAA 246 (282)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS---CCHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC---CcHHHHHH
Confidence 123566677788888888888888887764322143 2244556667778888888888888888753 44444443
Q ss_pred H
Q 015370 376 L 376 (408)
Q Consensus 376 l 376 (408)
|
T Consensus 247 L 247 (282)
T 4f3v_A 247 L 247 (282)
T ss_dssp H
T ss_pred H
Confidence 3
No 146
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=98.55 E-value=2e-06 Score=76.16 Aligned_cols=138 Identities=6% Similarity=-0.178 Sum_probs=73.4
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHH
Q 015370 226 DIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFL 305 (408)
Q Consensus 226 ~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l 305 (408)
+...+..+...+.+.|++++|...|++..+.. +.+.. -..+.+.. .. +.....|..+
T Consensus 146 ~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~--p~~~~------------~~~~~~~~--~~-------~~~~~~~~nl 202 (336)
T 1p5q_A 146 QSTIVKERGTVYFKEGKYKQALLQYKKIVSWL--EYESS------------FSNEEAQK--AQ-------ALRLASHLNL 202 (336)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHT--TTCCC------------CCSHHHHH--HH-------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHh--hcccc------------CChHHHHH--HH-------HHHHHHHHHH
Confidence 45677788888888999999999998887732 11200 00011111 00 0012344455
Q ss_pred HHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHhcCC
Q 015370 306 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGL 385 (408)
Q Consensus 306 i~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~ 385 (408)
..+|.+.|++++|+..+++..+.... +...|..+..+|...|++++|...|++..+.. +.+...+..+..++.+.|+
T Consensus 203 a~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~--P~~~~a~~~l~~~~~~~~~ 279 (336)
T 1p5q_A 203 AMCHLKLQAFSAAIESCNKALELDSN-NEKGLSRRGEAHLAVNDFELARADFQKVLQLY--PNNKAAKTQLAVCQQRIRR 279 (336)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--SSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHH
Confidence 55555555555555555555444321 34445555555555555555555555555542 2344455555555555555
Q ss_pred hHHH
Q 015370 386 TEKA 389 (408)
Q Consensus 386 ~~~a 389 (408)
+++|
T Consensus 280 ~~~a 283 (336)
T 1p5q_A 280 QLAR 283 (336)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5555
No 147
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=98.54 E-value=1e-06 Score=67.89 Aligned_cols=99 Identities=10% Similarity=-0.083 Sum_probs=55.2
Q ss_pred CHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHH
Q 015370 262 DWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICIL 341 (408)
Q Consensus 262 ~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li 341 (408)
+...+..+...+.+.|++++|.. .+.......+. +...|..+..+|...|++++|...|++....... +...+..+.
T Consensus 20 ~~~~~~~~g~~~~~~g~~~~A~~-~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~-~~~~~~~lg 96 (148)
T 2vgx_A 20 TLEQLYSLAFNQYQSGXYEDAHX-VFQALCVLDHY-DSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIX-EPRFPFHAA 96 (148)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CTHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCChHHHHH-HHHHHHHcCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC-CchHHHHHH
Confidence 33444555555666666666666 55555444322 4555555666666666666666666655554321 344455556
Q ss_pred HHHHhcCCHHHHHHHHHHHHhh
Q 015370 342 SSYLMLGHLKEVGEIIDQWKQS 363 (408)
Q Consensus 342 ~~~~~~g~~~~A~~~~~~~~~~ 363 (408)
.+|...|++++|...|++..+.
T Consensus 97 ~~~~~~g~~~~A~~~~~~al~~ 118 (148)
T 2vgx_A 97 ECLLQXGELAEAESGLFLAQEL 118 (148)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHH
Confidence 6666666666666666666554
No 148
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.53 E-value=2.5e-06 Score=61.53 Aligned_cols=100 Identities=10% Similarity=-0.005 Sum_probs=81.6
Q ss_pred ccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCC--CHHHHHH
Q 015370 298 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDF--DISACNR 375 (408)
Q Consensus 298 ~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~--~~~~~~~ 375 (408)
+...|..+...+...|++++|...+++..+... .+...+..+...+...|++++|...+++..+.. +. +...|..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~-~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~--~~~~~~~~~~~ 81 (112)
T 2kck_A 5 NPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDP-EESKYWLMKGKALYNLERYEEAVDCYNYVINVI--EDEYNKDVWAA 81 (112)
T ss_dssp STTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTS--CCTTCHHHHHH
T ss_pred cHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCc-CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC--cccchHHHHHH
Confidence 456677788888889999999999988777643 256677788888999999999999999988754 34 6788888
Q ss_pred HHHHHHhc-CChHHHHHHHHHHHhcC
Q 015370 376 LLGAFSDV-GLTEKANEFHMLLLQKN 400 (408)
Q Consensus 376 li~~~~~~-g~~~~a~~~~~~m~~~g 400 (408)
+..++.+. |++++|.+.+++..+.+
T Consensus 82 l~~~~~~~~~~~~~A~~~~~~~~~~~ 107 (112)
T 2kck_A 82 KADALRYIEGKEVEAEIAEARAKLEH 107 (112)
T ss_dssp HHHHHTTCSSCSHHHHHHHHHHGGGC
T ss_pred HHHHHHHHhCCHHHHHHHHHHHhhcc
Confidence 99999999 99999999999998743
No 149
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.52 E-value=4.4e-07 Score=73.72 Aligned_cols=149 Identities=4% Similarity=-0.118 Sum_probs=94.4
Q ss_pred HHHHHhhcChHHHHHHHhcCCCC-CCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCCh----------------h
Q 015370 131 IDLMTKVFGIHSGERYFEGLPLS-AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNA----------------L 193 (408)
Q Consensus 131 i~~~~~~g~~~~a~~~~~~~~~~-~~~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~----------------~ 193 (408)
+......|+++.+.+.++.-... ......+..+...+.+.|++++|...|++..... +.+. .
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~~~~~~~~~~~~~ 89 (198)
T 2fbn_A 11 SSGRENLYFQGAKKSIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFF-IHTEEWDDQILLDKKKNIEIS 89 (198)
T ss_dssp -----------CCCSGGGCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT-TTCTTCCCHHHHHHHHHHHHH
T ss_pred hhhhhhhhhccccCchhhCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-hcccccchhhHHHHHHHHHHH
Confidence 33445556666666666543321 1245667778888888889999998888887653 1122 6
Q ss_pred hHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Q 015370 194 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273 (408)
Q Consensus 194 ~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~ 273 (408)
+|..+..+|.+.|++++|...++....... .+...+..+..++...|++++|...|++..+. .+.+...+..+..++
T Consensus 90 ~~~~la~~~~~~~~~~~A~~~~~~al~~~p-~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~--~p~~~~~~~~l~~~~ 166 (198)
T 2fbn_A 90 CNLNLATCYNKNKDYPKAIDHASKVLKIDK-NNVKALYKLGVANMYFGFLEEAKENLYKAASL--NPNNLDIRNSYELCV 166 (198)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHST-TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--STTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCc-ccHHHHHHHHHHHHHcccHHHHHHHHHHHHHH--CCCcHHHHHHHHHHH
Confidence 777777788888888888888887776532 25667777777788888888888888877662 244566666777777
Q ss_pred HHcCchhhhH
Q 015370 274 ITASHLVNAE 283 (408)
Q Consensus 274 ~~~~~~~~a~ 283 (408)
...++.+++.
T Consensus 167 ~~~~~~~~~~ 176 (198)
T 2fbn_A 167 NKLKEARKKD 176 (198)
T ss_dssp HHHHHHHC--
T ss_pred HHHHHHHHHH
Confidence 7666666665
No 150
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=98.51 E-value=3.5e-06 Score=74.59 Aligned_cols=151 Identities=5% Similarity=-0.086 Sum_probs=110.6
Q ss_pred cChHHHHHHHhcCCCCCC-CHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCC---------------hhhHHHHHHH
Q 015370 138 FGIHSGERYFEGLPLSAK-TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFN---------------ALMYNEMMTL 201 (408)
Q Consensus 138 g~~~~a~~~~~~~~~~~~-~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~---------------~~~~~~li~~ 201 (408)
+++++|...|+......| +...|..+...+.+.|++++|...|++..... +.+ ..+|..+..+
T Consensus 127 ~~~~~A~~~~~~a~~~~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~-p~~~~~~~~~~~~~~~~~~~~~~nla~~ 205 (336)
T 1p5q_A 127 KSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWL-EYESSFSNEEAQKAQALRLASHLNLAMC 205 (336)
T ss_dssp EEEECCCCGGGCCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHT-TTCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred eecccccchhcCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHh-hccccCChHHHHHHHHHHHHHHHHHHHH
Confidence 345555555554433222 46788888899999999999999999988764 222 4788888888
Q ss_pred HHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhh
Q 015370 202 YMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 281 (408)
Q Consensus 202 ~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~ 281 (408)
|.+.|++++|...+++..+... .+...|..+..+|...|++++|...|++..+. .+.+...+..+..++.+.|+.++
T Consensus 206 ~~~~g~~~~A~~~~~~al~~~p-~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l--~P~~~~a~~~l~~~~~~~~~~~~ 282 (336)
T 1p5q_A 206 HLKLQAFSAAIESCNKALELDS-NNEKGLSRRGEAHLAVNDFELARADFQKVLQL--YPNNKAAKTQLAVCQQRIRRQLA 282 (336)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CSSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCC-CcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHH
Confidence 8888888888888888887543 26777888888888888888888888888773 34566778888888888888887
Q ss_pred hHHHHHHHHHH
Q 015370 282 AESSTLVEAEK 292 (408)
Q Consensus 282 a~~~~~~~~~~ 292 (408)
|.+-.+..|+.
T Consensus 283 a~~~~~~~~~~ 293 (336)
T 1p5q_A 283 REKKLYANMFE 293 (336)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 74425555543
No 151
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.50 E-value=5.1e-06 Score=76.18 Aligned_cols=161 Identities=10% Similarity=-0.009 Sum_probs=77.7
Q ss_pred HHHHHcCCCHHHHHHHHHHHHhCCCCCC----------------hhhHHHHHHHHHhcCCHHHHHHHHHHHHhCC-CCCC
Q 015370 164 LHLYAGAKWTEKAEELFERVKQSNLSFN----------------ALMYNEMMTLYMSVGQVEKVALVVEEIKRKN-VVPD 226 (408)
Q Consensus 164 l~~~~~~~~~~~A~~~~~~m~~~~~~p~----------------~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g-~~p~ 226 (408)
...+.+.|++++|++.|.++.+..-... ..++..+...|.+.|++++|.+.+..+...- ..++
T Consensus 11 a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~ 90 (434)
T 4b4t_Q 11 ARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAK 90 (434)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCH
T ss_pred HHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccc
Confidence 3455667778888887777776532111 0135566666777777777776666554311 1112
Q ss_pred HH----HHHHHHHHHHhcCCHHHHHHHHHHHhcC---CCCCCC-HHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCc
Q 015370 227 IF----TYNLWISSCAATLNIDQVKKFLDEMSCD---SGGSDD-WVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQ 298 (408)
Q Consensus 227 ~~----~~~~ll~~~~~~g~~~~a~~~~~~~~~~---~~~~~~-~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 298 (408)
.. +.+.+-..+...|+++.+..+++..... .+..+. ..++..+...|...|++++|.. ++..........+
T Consensus 91 ~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~-~l~~~~~~~~~~~ 169 (434)
T 4b4t_Q 91 SKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLA-LINDLLREFKKLD 169 (434)
T ss_dssp HHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHH-HHHHHHHHHTTSS
T ss_pred hHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHH-HHHHHHHHHHhcc
Confidence 11 1111222223345566666666554431 111111 2234455555555555555555 4444433222111
Q ss_pred -----cchHHHHHHHHHhcCCHHHHHHHHHHH
Q 015370 299 -----WITYDFLIILYAGLGNKDKIDQIWKSL 325 (408)
Q Consensus 299 -----~~~~~~li~~~~~~~~~~~a~~~~~~m 325 (408)
...+..++..|...|++++|..++++.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a 201 (434)
T 4b4t_Q 170 DKPSLVDVHLLESKVYHKLRNLAKSKASLTAA 201 (434)
T ss_dssp CSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 234444555555555555555555443
No 152
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.47 E-value=8.5e-06 Score=59.19 Aligned_cols=97 Identities=9% Similarity=-0.020 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHH
Q 015370 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 236 (408)
Q Consensus 157 ~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~ 236 (408)
...+..+...+...|++++|...|++..... +.+...+..+...+...|++++|...+++..+... .+...+..+..+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~~a~~ 81 (118)
T 1elw_A 4 VNELKEKGNKALSVGNIDDALQCYSEAIKLD-PHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKP-DWGKGYSRKAAA 81 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHC-CCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCc-ccHHHHHHHHHH
Confidence 4456666677777777777777777776653 33566677777777777777777777777766432 245666666777
Q ss_pred HHhcCCHHHHHHHHHHHhc
Q 015370 237 CAATLNIDQVKKFLDEMSC 255 (408)
Q Consensus 237 ~~~~g~~~~a~~~~~~~~~ 255 (408)
+...|++++|...+++..+
T Consensus 82 ~~~~~~~~~A~~~~~~~~~ 100 (118)
T 1elw_A 82 LEFLNRFEEAKRTYEEGLK 100 (118)
T ss_dssp HHHTTCHHHHHHHHHHHHT
T ss_pred HHHHhhHHHHHHHHHHHHH
Confidence 7777777777777777665
No 153
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=98.47 E-value=3.2e-06 Score=66.15 Aligned_cols=99 Identities=14% Similarity=0.012 Sum_probs=74.3
Q ss_pred CHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHH
Q 015370 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235 (408)
Q Consensus 156 ~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~ 235 (408)
+...|..+...+.+.|++++|+..|++..+.. +-+...|..+..+|.+.|++++|+..|++..+.... +...|..+..
T Consensus 10 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~ 87 (164)
T 3sz7_A 10 ESDKLKSEGNAAMARKEYSKAIDLYTQALSIA-PANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPK-YSKAWSRLGL 87 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-CHHHHHHHHH
Confidence 45667777778888888888888888877764 346777788888888888888888888887765432 4667777777
Q ss_pred HHHhcCCHHHHHHHHHHHhcC
Q 015370 236 SCAATLNIDQVKKFLDEMSCD 256 (408)
Q Consensus 236 ~~~~~g~~~~a~~~~~~~~~~ 256 (408)
++...|++++|...|++..+.
T Consensus 88 ~~~~~g~~~~A~~~~~~al~~ 108 (164)
T 3sz7_A 88 ARFDMADYKGAKEAYEKGIEA 108 (164)
T ss_dssp HHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHccCHHHHHHHHHHHHHh
Confidence 888888888888888877663
No 154
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=98.47 E-value=2.3e-06 Score=65.30 Aligned_cols=107 Identities=12% Similarity=-0.036 Sum_probs=72.9
Q ss_pred HhcCCCCCC-CHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCC
Q 015370 147 FEGLPLSAK-TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVP 225 (408)
Q Consensus 147 ~~~~~~~~~-~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p 225 (408)
|++.....| +...+..+...+.+.|++++|...|++....+ +.+...|..+..+|...|++++|...|+........
T Consensus 7 l~~al~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~- 84 (142)
T 2xcb_A 7 LAMLRGLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLD-HYDARYFLGLGACRQSLGLYEQALQSYSYGALMDIN- 84 (142)
T ss_dssp --CCTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhC-CccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC-
Confidence 444444333 45566667777777788888888887777654 446677777777777788888888888777765432
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHhc
Q 015370 226 DIFTYNLWISSCAATLNIDQVKKFLDEMSC 255 (408)
Q Consensus 226 ~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~ 255 (408)
+...+..+..++...|++++|...|+...+
T Consensus 85 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 114 (142)
T 2xcb_A 85 EPRFPFHAAECHLQLGDLDGAESGFYSARA 114 (142)
T ss_dssp CTHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 455666677777777888888777777665
No 155
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.45 E-value=4.9e-05 Score=69.56 Aligned_cols=198 Identities=11% Similarity=-0.015 Sum_probs=142.0
Q ss_pred HHHHHhcccHHHHHHHHHHHHhccCCCCC---------------hHHHHHHHHHHHhhcChHHHHHHHhcCCCC--C-CC
Q 015370 95 LKELRKSQRYKHALEISEWMVTHKEFVLS---------------DSDYATRIDLMTKVFGIHSGERYFEGLPLS--A-KT 156 (408)
Q Consensus 95 i~~~~~~~~~~~a~~~~~~~~~~~~~~~~---------------~~~~~~li~~~~~~g~~~~a~~~~~~~~~~--~-~~ 156 (408)
.+.+.+.|++++|++.|..+.+...-..+ ...+..+...|...|++++|.+++..+... . ++
T Consensus 11 a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~ 90 (434)
T 4b4t_Q 11 ARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAK 90 (434)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCH
T ss_pred HHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccc
Confidence 45677889999999999999875421111 124778899999999999999998877543 1 11
Q ss_pred ----HHHHHHHHHHHHcCCCHHHHHHHHHHHHh----CCCCC-ChhhHHHHHHHHHhcCCHHHHHHHHHHHHhC----CC
Q 015370 157 ----SETYTALLHLYAGAKWTEKAEELFERVKQ----SNLSF-NALMYNEMMTLYMSVGQVEKVALVVEEIKRK----NV 223 (408)
Q Consensus 157 ----~~~~~~ll~~~~~~~~~~~A~~~~~~m~~----~~~~p-~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~----g~ 223 (408)
..+.+.+-..+...|+.++|..++++... .+..+ -..++..+...|...|++++|..++++.... +-
T Consensus 91 ~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~ 170 (434)
T 4b4t_Q 91 SKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDD 170 (434)
T ss_dssp HHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSC
T ss_pred hHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhccc
Confidence 23344455556677899999999988654 22222 3457888999999999999999999887642 11
Q ss_pred CC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHhcC---CCCCCC--HHHHHHHHHHHHHcCchhhhHHHHHHHHHHh
Q 015370 224 VP-DIFTYNLWISSCAATLNIDQVKKFLDEMSCD---SGGSDD--WVKYVNLVNIYITASHLVNAESSTLVEAEKS 293 (408)
Q Consensus 224 ~p-~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~---~~~~~~--~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~ 293 (408)
.+ ...++..++..|...|++++|..++++.... .+.++. ...+..+...+...+++++|.. .+......
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~g~~~~~~~~y~~A~~-~~~~a~~~ 245 (434)
T 4b4t_Q 171 KPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIYCPTQTVAELDLMSGILHCEDKDYKTAFS-YFFESFES 245 (434)
T ss_dssp STHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTSSSCHHHHHH-HHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHhHHHHHH-HHHHHHHH
Confidence 22 2457888889999999999999999876542 111221 2446677778888899999998 67666553
No 156
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=98.45 E-value=5.1e-06 Score=61.69 Aligned_cols=96 Identities=10% Similarity=-0.039 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHH
Q 015370 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 237 (408)
Q Consensus 158 ~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~ 237 (408)
..|..+...+.+.|++++|+..|++..+.. +.+...|..+..+|.+.|++++|...+++..+.... +...|..+..++
T Consensus 5 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~ 82 (126)
T 3upv_A 5 EEARLEGKEYFTKSDWPNAVKAYTEMIKRA-PEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPN-FVRAYIRKATAQ 82 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHH
Confidence 345555555566666666666666655543 334555666666666666666666666665554321 344555555556
Q ss_pred HhcCCHHHHHHHHHHHhc
Q 015370 238 AATLNIDQVKKFLDEMSC 255 (408)
Q Consensus 238 ~~~g~~~~a~~~~~~~~~ 255 (408)
...|++++|...|++..+
T Consensus 83 ~~~~~~~~A~~~~~~al~ 100 (126)
T 3upv_A 83 IAVKEYASALETLDAART 100 (126)
T ss_dssp HHTTCHHHHHHHHHHHHH
T ss_pred HHHhCHHHHHHHHHHHHH
Confidence 666666666666655544
No 157
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.43 E-value=4.6e-06 Score=60.68 Aligned_cols=97 Identities=12% Similarity=-0.035 Sum_probs=55.7
Q ss_pred hhhHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHHHHhcCCCCC-CCHHHHHHHHHH
Q 015370 88 VSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA-KTSETYTALLHL 166 (408)
Q Consensus 88 ~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~-~~~~~~~~ll~~ 166 (408)
...+..+...+...|++++|.+.|+...... +.+...+..+...+...|++++|...+++..... .+...+..+..+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~ 81 (118)
T 1elw_A 4 VNELKEKGNKALSVGNIDDALQCYSEAIKLD--PHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAA 81 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHC--CCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 3445556666666677777777776666543 3345555555566666666666666555544332 235555555555
Q ss_pred HHcCCCHHHHHHHHHHHHhC
Q 015370 167 YAGAKWTEKAEELFERVKQS 186 (408)
Q Consensus 167 ~~~~~~~~~A~~~~~~m~~~ 186 (408)
+...|++++|.+.+++..+.
T Consensus 82 ~~~~~~~~~A~~~~~~~~~~ 101 (118)
T 1elw_A 82 LEFLNRFEEAKRTYEEGLKH 101 (118)
T ss_dssp HHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHhhHHHHHHHHHHHHHc
Confidence 55556666666655555554
No 158
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=98.42 E-value=1.8e-06 Score=65.86 Aligned_cols=100 Identities=13% Similarity=-0.075 Sum_probs=77.7
Q ss_pred CHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHH
Q 015370 262 DWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICIL 341 (408)
Q Consensus 262 ~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li 341 (408)
+...+..+...+.+.|++++|.. .+.......+. +...|..+..+|...|++++|...|++....... +...+..+.
T Consensus 17 ~~~~~~~~a~~~~~~g~~~~A~~-~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg 93 (142)
T 2xcb_A 17 TLEQLYALGFNQYQAGKWDDAQK-IFQALCMLDHY-DARYFLGLGACRQSLGLYEQALQSYSYGALMDIN-EPRFPFHAA 93 (142)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccHHHHHH-HHHHHHHhCCc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC-CcHHHHHHH
Confidence 44556677788888899999988 78877765443 6677888888888899999999998888776432 555677788
Q ss_pred HHHHhcCCHHHHHHHHHHHHhhC
Q 015370 342 SSYLMLGHLKEVGEIIDQWKQSA 364 (408)
Q Consensus 342 ~~~~~~g~~~~A~~~~~~~~~~~ 364 (408)
.+|...|++++|...|++..+..
T Consensus 94 ~~~~~~g~~~~A~~~~~~al~~~ 116 (142)
T 2xcb_A 94 ECHLQLGDLDGAESGFYSARALA 116 (142)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhC
Confidence 88888899999999988887654
No 159
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.40 E-value=0.00015 Score=63.26 Aligned_cols=235 Identities=10% Similarity=0.020 Sum_probs=129.4
Q ss_pred HhcccHH-HHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcC----------hHHHHHHHhcCCCC-CCCHHHHHHHHHH
Q 015370 99 RKSQRYK-HALEISEWMVTHKEFVLSDSDYATRIDLMTKVFG----------IHSGERYFEGLPLS-AKTSETYTALLHL 166 (408)
Q Consensus 99 ~~~~~~~-~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~----------~~~a~~~~~~~~~~-~~~~~~~~~ll~~ 166 (408)
.+.|.++ +|+++++.+.... +-+...|+.--..+...+. +++++.+++.+... +.+..+|+.-...
T Consensus 40 ~~~~e~s~eaL~~t~~~L~~n--P~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKny~aW~hR~wl 117 (331)
T 3dss_A 40 RQAGELDESVLELTSQILGAN--PDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWL 117 (331)
T ss_dssp HHTTCCSHHHHHHHHHHHTTC--TTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHcCCCCHHHHHHHHHHHHHC--chhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3455554 7888888888753 3334455654444444333 46666666665544 3467777776666
Q ss_pred HHcCC--CHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCC-HHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCH
Q 015370 167 YAGAK--WTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ-VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 243 (408)
Q Consensus 167 ~~~~~--~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~-~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~ 243 (408)
+.+.+ .+++++.+++++.+.+ +-|..+|+.-...+...|. ++++++.++.+.+..+. |...|+-....+.+.+..
T Consensus 118 L~~l~~~~~~~EL~~~~k~l~~d-prNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~-N~SAW~~R~~ll~~l~~~ 195 (331)
T 3dss_A 118 LSRLPEPNWARELELCARFLEAD-ERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFS-NYSSWHYRSCLLPQLHPQ 195 (331)
T ss_dssp HHHCSSCCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHHSCC
T ss_pred HhccCcccHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHhhhc
Confidence 66666 3777777777777765 4466777766666667776 57777777777766543 666666555554443110
Q ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhc-----------
Q 015370 244 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL----------- 312 (408)
Q Consensus 244 ~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~----------- 312 (408)
..+- ...+ ...+.++++++ .+.......+. |...|+.+-..+.+.
T Consensus 196 ~~~~-------~~~~---------------~~~~~~~eEle-~~~~ai~~~P~-d~SaW~Y~r~ll~~~~~~~~~~~~~~ 251 (331)
T 3dss_A 196 PDSG-------PQGR---------------LPENVLLKELE-LVQNAFFTDPN-DQSAWFYHRWLLGAGSGRCELSVEKS 251 (331)
T ss_dssp C-------------C---------------CCHHHHHHHHH-HHHHHHHHSTT-CHHHHHHHHHHHHSSSCGGGCCHHHH
T ss_pred cccc-------cccc---------------cchHHHHHHHH-HHHHHHHhCCC-CHHHHHHHHHHHHhccCccccchHHH
Confidence 0000 0000 00022344444 44444433322 444454333333332
Q ss_pred CCHHHHHHHHHHHHhccCCCChhhHHH--H---HHHHHhcCCHHHHHHHHHHHHhhC
Q 015370 313 GNKDKIDQIWKSLRMTKQKMTSRNYIC--I---LSSYLMLGHLKEVGEIIDQWKQSA 364 (408)
Q Consensus 313 ~~~~~a~~~~~~m~~~~~~p~~~~~~~--l---i~~~~~~g~~~~A~~~~~~~~~~~ 364 (408)
+.++++++.+.++.+. .|+. .|.. + ..+....|..+++...+.++++..
T Consensus 252 ~~l~~el~~~~elle~--~pd~-~w~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~D 305 (331)
T 3dss_A 252 TVLQSELESCKELQEL--EPEN-KWCLLTIILLMRALDPLLYEKETLQYFSTLKAVD 305 (331)
T ss_dssp HHHHHHHHHHHHHHHH--CTTC-HHHHHHHHHHHHHHCTTTTHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhh--Cccc-chHHHHHHHHHHhhcccccHHHHHHHHHHHHHhC
Confidence 3466777777777665 3443 2221 1 112224567778888888888743
No 160
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=98.38 E-value=6.6e-06 Score=61.32 Aligned_cols=97 Identities=11% Similarity=0.065 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCC--CCCC----HHHHH
Q 015370 158 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN--VVPD----IFTYN 231 (408)
Q Consensus 158 ~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g--~~p~----~~~~~ 231 (408)
..+..+...+.+.|++++|+..|++.++.. |-+..+|+.+..+|.+.|++++|+..+++..+.. ..++ ..+|.
T Consensus 9 ~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~-p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~ 87 (127)
T 4gcn_A 9 IAEKDLGNAAYKQKDFEKAHVHYDKAIELD-PSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMS 87 (127)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHH
Confidence 445566666777777777777777766653 3356666777777777777777777776665421 1111 12455
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHhc
Q 015370 232 LWISSCAATLNIDQVKKFLDEMSC 255 (408)
Q Consensus 232 ~ll~~~~~~g~~~~a~~~~~~~~~ 255 (408)
.+..++...|++++|++.|++...
T Consensus 88 ~lg~~~~~~~~~~~A~~~~~kal~ 111 (127)
T 4gcn_A 88 RAGNAFQKQNDLSLAVQWFHRSLS 111 (127)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHh
Confidence 555666666777777777666554
No 161
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=98.38 E-value=8e-06 Score=60.61 Aligned_cols=96 Identities=16% Similarity=0.008 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHH
Q 015370 264 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSS 343 (408)
Q Consensus 264 ~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~ 343 (408)
..+..+...+.+.|++++|.. .+.+.....+. +...|..+..++...|++++|+..+++..+.... +...|..+..+
T Consensus 5 ~~~~~~g~~~~~~~~~~~A~~-~~~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~ 81 (126)
T 3upv_A 5 EEARLEGKEYFTKSDWPNAVK-AYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAIEKDPN-FVRAYIRKATA 81 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHH-HHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHH-HHHHHHHhCCC-ChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-cHHHHHHHHHH
Confidence 345556666666666666666 66655554332 4556666666666666666666666665554321 34455556666
Q ss_pred HHhcCCHHHHHHHHHHHHh
Q 015370 344 YLMLGHLKEVGEIIDQWKQ 362 (408)
Q Consensus 344 ~~~~g~~~~A~~~~~~~~~ 362 (408)
+...|++++|...|++..+
T Consensus 82 ~~~~~~~~~A~~~~~~al~ 100 (126)
T 3upv_A 82 QIAVKEYASALETLDAART 100 (126)
T ss_dssp HHHTTCHHHHHHHHHHHHH
T ss_pred HHHHhCHHHHHHHHHHHHH
Confidence 6666666666666666554
No 162
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.38 E-value=1.1e-05 Score=62.39 Aligned_cols=133 Identities=17% Similarity=0.133 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCc-----cchHHHHHHHHHhcCCHHHHHHHHHHHHhccCC-CC----h
Q 015370 265 KYVNLVNIYITASHLVNAESSTLVEAEKSITQRQ-----WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK-MT----S 334 (408)
Q Consensus 265 ~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~-----~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~-p~----~ 334 (408)
++..+...|...|++++|.. .+.+......... ..++..+...+...|++++|.+.+++..+.... ++ .
T Consensus 11 ~~~~l~~~~~~~~~~~~A~~-~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~ 89 (164)
T 3ro3_A 11 AFGNLGNTHYLLGNFRDAVI-AHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEA 89 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHH-HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHH-HHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHH
Confidence 34555556666666666666 5555444322111 135666777777777888777777765443211 11 2
Q ss_pred hhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCC----CHHHHHHHHHHHHhcCChHHHHHHHHHHHh
Q 015370 335 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDF----DISACNRLLGAFSDVGLTEKANEFHMLLLQ 398 (408)
Q Consensus 335 ~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~----~~~~~~~li~~~~~~g~~~~a~~~~~~m~~ 398 (408)
..+..+...+...|++++|...+++..+...... ....+..+...+...|++++|.+.+++..+
T Consensus 90 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 157 (164)
T 3ro3_A 90 QSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLE 157 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 3455677777888888888888887764311111 134567778888888888888888888765
No 163
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=98.38 E-value=8.3e-06 Score=63.76 Aligned_cols=96 Identities=13% Similarity=0.038 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHH
Q 015370 265 KYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY 344 (408)
Q Consensus 265 ~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~ 344 (408)
.+..+...+.+.|++++|.. .+.+.....+. +...|..+..+|...|++++|+..|++..+.... +...|..+..+|
T Consensus 13 ~~~~~g~~~~~~g~~~~A~~-~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~ 89 (164)
T 3sz7_A 13 KLKSEGNAAMARKEYSKAID-LYTQALSIAPA-NPIYLSNRAAAYSASGQHEKAAEDAELATVVDPK-YSKAWSRLGLAR 89 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHH-HHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHH-HHHHHHHhCCc-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHH
Confidence 34444444444444444444 44444333222 3344444444444455555555555444443211 233444444455
Q ss_pred HhcCCHHHHHHHHHHHHhh
Q 015370 345 LMLGHLKEVGEIIDQWKQS 363 (408)
Q Consensus 345 ~~~g~~~~A~~~~~~~~~~ 363 (408)
...|++++|...|++..+.
T Consensus 90 ~~~g~~~~A~~~~~~al~~ 108 (164)
T 3sz7_A 90 FDMADYKGAKEAYEKGIEA 108 (164)
T ss_dssp HHTTCHHHHHHHHHHHHHH
T ss_pred HHccCHHHHHHHHHHHHHh
Confidence 5555555555555554443
No 164
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.36 E-value=8.6e-06 Score=61.30 Aligned_cols=99 Identities=10% Similarity=0.018 Sum_probs=61.0
Q ss_pred CCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHH
Q 015370 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 234 (408)
Q Consensus 155 ~~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll 234 (408)
.+...|..+...+.+.|++++|...|++..... +.+...|..+...+...|++++|...++...+.... +...+..+.
T Consensus 7 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~ 84 (137)
T 3q49_B 7 PSAQELKEQGNRLFVGRKYPEAAACYGRAITRN-PLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQ-SVKAHFFLG 84 (137)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhC-cCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCch-hHHHHHHHH
Confidence 345566666666666666666666666666543 334556666666666666666666666666654322 455566666
Q ss_pred HHHHhcCCHHHHHHHHHHHhc
Q 015370 235 SSCAATLNIDQVKKFLDEMSC 255 (408)
Q Consensus 235 ~~~~~~g~~~~a~~~~~~~~~ 255 (408)
.++...|++++|...|++..+
T Consensus 85 ~~~~~~~~~~~A~~~~~~a~~ 105 (137)
T 3q49_B 85 QCQLEMESYDEAIANLQRAYS 105 (137)
T ss_dssp HHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHH
Confidence 666666666666666666544
No 165
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.36 E-value=0.00077 Score=58.69 Aligned_cols=181 Identities=8% Similarity=-0.085 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcC--CHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCc-hhhhHH
Q 015370 208 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL--NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH-LVNAES 284 (408)
Q Consensus 208 ~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g--~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~-~~~a~~ 284 (408)
+++++.+++.+.....+ +..+|+.-.-.+.+.+ ++++++.+++.+.+. .+-+..+|+.-.-.+.+.|. .+++++
T Consensus 90 l~~EL~~~~~~L~~~PK-ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~--dprNy~AW~~R~~vl~~l~~~~~eel~ 166 (331)
T 3dss_A 90 VKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELELCARFLEA--DERNFHCWDYRRFVAAQAAVAPAEELA 166 (331)
T ss_dssp HHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHhCCC-CHHHHHHHHHHHhccCcccHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHhCcCHHHHHH
Confidence 34555555555544332 4444444444444444 245555555555552 23444555544444445554 355555
Q ss_pred HHHHHHHHhcccCccchHHHHHHHHHhc--------------CCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhc---
Q 015370 285 STLVEAEKSITQRQWITYDFLIILYAGL--------------GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML--- 347 (408)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~li~~~~~~--------------~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~--- 347 (408)
.+..+.+..+. |...|+.....+.+. +.++++++.+.......+. |...|+-+-..+.+.
T Consensus 167 -~~~~~I~~~p~-N~SAW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~-d~SaW~Y~r~ll~~~~~~ 243 (331)
T 3dss_A 167 -FTDSLITRNFS-NYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPN-DQSAWFYHRWLLGAGSGR 243 (331)
T ss_dssp -HHHHHHHHCSC-CHHHHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHSSSCG
T ss_pred -HHHHHHHHCCC-CHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHhccCc
Confidence 55555544333 555555544444433 3467888888877765432 455555443333333
Q ss_pred --------CCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHH-----HHhcCChHHHHHHHHHHHh
Q 015370 348 --------GHLKEVGEIIDQWKQSATSDFDISACNRLLGA-----FSDVGLTEKANEFHMLLLQ 398 (408)
Q Consensus 348 --------g~~~~A~~~~~~~~~~~~~~~~~~~~~~li~~-----~~~~g~~~~a~~~~~~m~~ 398 (408)
+.++++++.++++.+.. ||. .|..+..+ ....|..+++...++++++
T Consensus 244 ~~~~~~~~~~l~~el~~~~elle~~---pd~-~w~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 303 (331)
T 3dss_A 244 CELSVEKSTVLQSELESCKELQELE---PEN-KWCLLTIILLMRALDPLLYEKETLQYFSTLKA 303 (331)
T ss_dssp GGCCHHHHHHHHHHHHHHHHHHHHC---TTC-HHHHHHHHHHHHHHCTTTTHHHHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHHHHhhC---ccc-chHHHHHHHHHHhhcccccHHHHHHHHHHHHH
Confidence 45889999999999854 443 34332222 2246788899999999887
No 166
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.35 E-value=1.1e-05 Score=61.54 Aligned_cols=97 Identities=9% Similarity=-0.045 Sum_probs=43.2
Q ss_pred CHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCC----hhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHH
Q 015370 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFN----ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYN 231 (408)
Q Consensus 156 ~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~----~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~ 231 (408)
+...+..+...+...|++++|...|++..+.. |+ ...|..+...|...|++++|...+++..+... .+...+.
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~ 103 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALGLD--ATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDG-GDVKALY 103 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSC--CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTS-CCHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHc--ccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCc-cCHHHHH
Confidence 34444444444444444444444444444432 22 33444444444444444444444444443311 1233444
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHhc
Q 015370 232 LWISSCAATLNIDQVKKFLDEMSC 255 (408)
Q Consensus 232 ~ll~~~~~~g~~~~a~~~~~~~~~ 255 (408)
.+..++...|++++|...|++..+
T Consensus 104 ~~a~~~~~~~~~~~A~~~~~~al~ 127 (148)
T 2dba_A 104 RRSQALEKLGRLDQAVLDLQRCVS 127 (148)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHH
Confidence 444444444444444444444443
No 167
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.35 E-value=6.5e-06 Score=61.12 Aligned_cols=98 Identities=13% Similarity=0.067 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCC--CCC----HHHH
Q 015370 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNV--VPD----IFTY 230 (408)
Q Consensus 157 ~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~--~p~----~~~~ 230 (408)
...|..+...+...|++++|...|++..... +.+...+..+...+...|++++|...++....... .++ ..++
T Consensus 4 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (131)
T 1elr_A 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELD-PTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAY 82 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC-CccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHH
Confidence 3456667777777777777777777776654 34566777777777777777777777777665421 111 5566
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHhc
Q 015370 231 NLWISSCAATLNIDQVKKFLDEMSC 255 (408)
Q Consensus 231 ~~ll~~~~~~g~~~~a~~~~~~~~~ 255 (408)
..+..++...|++++|.+.|++..+
T Consensus 83 ~~la~~~~~~~~~~~A~~~~~~~~~ 107 (131)
T 1elr_A 83 ARIGNSYFKEEKYKDAIHFYNKSLA 107 (131)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHH
Confidence 6666777777777777777777666
No 168
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.34 E-value=1.5e-05 Score=59.99 Aligned_cols=101 Identities=8% Similarity=-0.050 Sum_probs=71.4
Q ss_pred CCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHH
Q 015370 260 SDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 339 (408)
Q Consensus 260 ~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~ 339 (408)
+.+...+..+...+...|++++|.. .+.......+. +...|..+...+...|++++|...+++..+.... +...+..
T Consensus 6 ~~~~~~~~~~g~~~~~~~~~~~A~~-~~~~al~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~ 82 (137)
T 3q49_B 6 SPSAQELKEQGNRLFVGRKYPEAAA-CYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQ-SVKAHFF 82 (137)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHH
T ss_pred cccHHHHHHHHHHHHHhCcHHHHHH-HHHHHHhhCcC-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCch-hHHHHHH
Confidence 3456667777777888888888887 77766655433 5567777777777788888888877777665422 4556667
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHhh
Q 015370 340 ILSSYLMLGHLKEVGEIIDQWKQS 363 (408)
Q Consensus 340 li~~~~~~g~~~~A~~~~~~~~~~ 363 (408)
+..++...|++++|...|++..+.
T Consensus 83 l~~~~~~~~~~~~A~~~~~~a~~~ 106 (137)
T 3q49_B 83 LGQCQLEMESYDEAIANLQRAYSL 106 (137)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHH
Confidence 777777778888888887777653
No 169
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.34 E-value=8e-06 Score=60.27 Aligned_cols=100 Identities=8% Similarity=-0.095 Sum_probs=75.3
Q ss_pred chHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHH
Q 015370 300 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGA 379 (408)
Q Consensus 300 ~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~li~~ 379 (408)
..+..+...+.+.|++++|...|++..+.... +...|..+..++...|++++|+..|++..+.. +.+...|..+..+
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~--P~~~~~~~~la~~ 94 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLD--PKDIAVHAALAVS 94 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHH
Confidence 34556677778888888888888887776432 56667778888888888888988888888764 3467778888888
Q ss_pred HHhcCChHHHHHHHHHHHhcCCCCC
Q 015370 380 FSDVGLTEKANEFHMLLLQKNCAPT 404 (408)
Q Consensus 380 ~~~~g~~~~a~~~~~~m~~~g~~p~ 404 (408)
+...|++++|...+++.++ ..|+
T Consensus 95 ~~~~g~~~~A~~~~~~al~--~~P~ 117 (121)
T 1hxi_A 95 HTNEHNANAALASLRAWLL--SQPQ 117 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHC------
T ss_pred HHHcCCHHHHHHHHHHHHH--hCcC
Confidence 8888888898888888876 4444
No 170
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.33 E-value=7.7e-06 Score=58.83 Aligned_cols=99 Identities=9% Similarity=-0.099 Sum_probs=60.9
Q ss_pred CHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCC-CCHHHHHHHH
Q 015370 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVV-PDIFTYNLWI 234 (408)
Q Consensus 156 ~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~-p~~~~~~~ll 234 (408)
+...|..+...+...|++++|...|++..+.. +.+...|..+...+...|++++|...+++..+.... .+...+..+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~ 83 (112)
T 2kck_A 5 NPEEYYLEGVLQYDAGNYTESIDLFEKAIQLD-PEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKA 83 (112)
T ss_dssp STTGGGGHHHHHHSSCCHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhC-cCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHH
Confidence 34455666666666677777777776666543 334556666666666666666666666666654211 0355566666
Q ss_pred HHHHhc-CCHHHHHHHHHHHhc
Q 015370 235 SSCAAT-LNIDQVKKFLDEMSC 255 (408)
Q Consensus 235 ~~~~~~-g~~~~a~~~~~~~~~ 255 (408)
.++... |++++|.+.++...+
T Consensus 84 ~~~~~~~~~~~~A~~~~~~~~~ 105 (112)
T 2kck_A 84 DALRYIEGKEVEAEIAEARAKL 105 (112)
T ss_dssp HHHTTCSSCSHHHHHHHHHHGG
T ss_pred HHHHHHhCCHHHHHHHHHHHhh
Confidence 666666 666666666666665
No 171
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.32 E-value=1.4e-05 Score=64.72 Aligned_cols=175 Identities=9% Similarity=-0.036 Sum_probs=87.0
Q ss_pred HHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCch
Q 015370 200 TLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279 (408)
Q Consensus 200 ~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~ 279 (408)
......|+++++.+.++.-..... .....+..+...+...|++++|...|++..+.....++.... ..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~-----------~~ 79 (198)
T 2fbn_A 12 SGRENLYFQGAKKSIYDYTDEEKV-QSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQ-----------IL 79 (198)
T ss_dssp ----------CCCSGGGCCHHHHH-HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCH-----------HH
T ss_pred hhhhhhhhccccCchhhCCHHHHH-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchh-----------hH
Confidence 333444555555555542222100 123445555666666777777777777666532111111000 00
Q ss_pred hhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHH
Q 015370 280 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 359 (408)
Q Consensus 280 ~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~ 359 (408)
..-.. ......|..+..+|...|++++|+..+++..+... .+...+..+..+|...|++++|...|++
T Consensus 80 ~~~~~-----------~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p-~~~~~~~~lg~~~~~~~~~~~A~~~~~~ 147 (198)
T 2fbn_A 80 LDKKK-----------NIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDK-NNVKALYKLGVANMYFGFLEEAKENLYK 147 (198)
T ss_dssp HHHHH-----------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST-TCHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHH-----------HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCc-ccHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 00000 00124566677777777888888888777766532 2455677777778888888888888888
Q ss_pred HHhhCCCCCCHHHHHHHHHHHHhcCChHHHH-HHHHHHHhcC
Q 015370 360 WKQSATSDFDISACNRLLGAFSDVGLTEKAN-EFHMLLLQKN 400 (408)
Q Consensus 360 ~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~-~~~~~m~~~g 400 (408)
..+.. +.+...+..+..++...++.+++. ..+..|...|
T Consensus 148 al~~~--p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~ 187 (198)
T 2fbn_A 148 AASLN--PNNLDIRNSYELCVNKLKEARKKDKLTFGGMFDKG 187 (198)
T ss_dssp HHHHS--TTCHHHHHHHHHHHHHHHHHHC-------------
T ss_pred HHHHC--CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 77654 335666777777777766666665 4555554433
No 172
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.31 E-value=3.1e-05 Score=58.84 Aligned_cols=98 Identities=8% Similarity=-0.079 Sum_probs=66.4
Q ss_pred ChHHHHHHHHHHHhhcChHHHHHHHhcCCCCCCC----HHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHH
Q 015370 123 SDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKT----SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEM 198 (408)
Q Consensus 123 ~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~----~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~l 198 (408)
+...+..+...+...|++++|...|++.....|+ ...|..+..+|...|++++|...+++..... +.+...|..+
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~ 105 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKD-GGDVKALYRR 105 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT-SCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhC-ccCHHHHHHH
Confidence 4456666667777777777777777766655554 5666677777777777777777777766653 3355666777
Q ss_pred HHHHHhcCCHHHHHHHHHHHHhC
Q 015370 199 MTLYMSVGQVEKVALVVEEIKRK 221 (408)
Q Consensus 199 i~~~~~~g~~~~a~~~~~~m~~~ 221 (408)
..++...|++++|...|++....
T Consensus 106 a~~~~~~~~~~~A~~~~~~al~~ 128 (148)
T 2dba_A 106 SQALEKLGRLDQAVLDLQRCVSL 128 (148)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHc
Confidence 77777777777777777776654
No 173
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.31 E-value=2.3e-06 Score=63.69 Aligned_cols=96 Identities=7% Similarity=0.035 Sum_probs=54.8
Q ss_pred hhHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHHHHhcCCCCCC----C----HHHH
Q 015370 89 SELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAK----T----SETY 160 (408)
Q Consensus 89 ~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~----~----~~~~ 160 (408)
..+..+...+...|++++|+..|+...+.. +.+...+..+...+...|++++|...|++.....| + ..+|
T Consensus 5 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~--~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (131)
T 1elr_A 5 LKEKELGNDAYKKKDFDTALKHYDKAKELD--PTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAY 82 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcC--CccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHH
Confidence 445566666667777777777777766643 33455555666666666666666666555433211 1 4455
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHhC
Q 015370 161 TALLHLYAGAKWTEKAEELFERVKQS 186 (408)
Q Consensus 161 ~~ll~~~~~~~~~~~A~~~~~~m~~~ 186 (408)
..+..++.+.|++++|.+.|++..+.
T Consensus 83 ~~la~~~~~~~~~~~A~~~~~~~~~~ 108 (131)
T 1elr_A 83 ARIGNSYFKEEKYKDAIHFYNKSLAE 108 (131)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 55555555555555555555555543
No 174
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=98.29 E-value=2.9e-05 Score=57.80 Aligned_cols=50 Identities=8% Similarity=0.101 Sum_probs=20.1
Q ss_pred HHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHH
Q 015370 233 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES 284 (408)
Q Consensus 233 ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~ 284 (408)
+...+.+.|++++|++.|++..+. .|.+...|..+..+|.+.|++++|+.
T Consensus 14 lG~~~~~~~~~~~A~~~y~~Al~~--~p~~~~~~~nlg~~~~~~~~~~~A~~ 63 (127)
T 4gcn_A 14 LGNAAYKQKDFEKAHVHYDKAIEL--DPSNITFYNNKAAVYFEEKKFAECVQ 63 (127)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHh--CCCCHHHHHhHHHHHHHhhhHHHHHH
Confidence 333444444444444444443331 12233334444444444444444444
No 175
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=98.25 E-value=1.9e-05 Score=73.09 Aligned_cols=150 Identities=5% Similarity=-0.036 Sum_probs=107.5
Q ss_pred ChHHHHHHHhcCCCCC-CCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCC---------------hhhHHHHHHHH
Q 015370 139 GIHSGERYFEGLPLSA-KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFN---------------ALMYNEMMTLY 202 (408)
Q Consensus 139 ~~~~a~~~~~~~~~~~-~~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~---------------~~~~~~li~~~ 202 (408)
++++|...|+...... .....|..+...+.+.|++++|...|++.++.. +.+ ..+|..+..+|
T Consensus 249 ~~~~A~~~~~~~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~-p~~~~~~~~~~~~~~~~~~~~~~nla~~~ 327 (457)
T 1kt0_A 249 SFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWL-EMEYGLSEKESKASESFLLAAFLNLAMCY 327 (457)
T ss_dssp EEECCCCGGGSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-TTCCSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcccCcchhhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHh-cccccCChHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555554433222 246678888899999999999999999988753 122 47888888888
Q ss_pred HhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhh
Q 015370 203 MSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 282 (408)
Q Consensus 203 ~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a 282 (408)
.+.|++++|+..+++..+.... +...|..+..+|...|++++|...|++..+. .+.+...+..+..++.+.++.+++
T Consensus 328 ~~~g~~~~A~~~~~~al~~~p~-~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l--~P~~~~a~~~l~~~~~~~~~~~~a 404 (457)
T 1kt0_A 328 LKLREYTKAVECCDKALGLDSA-NEKGLYRRGEAQLLMNEFESAKGDFEKVLEV--NPQNKAARLQISMCQKKAKEHNER 404 (457)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT--C----CHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999888876432 5777888888888999999999999888873 344566778888888888888877
Q ss_pred HHHHHHHHHH
Q 015370 283 ESSTLVEAEK 292 (408)
Q Consensus 283 ~~~~~~~~~~ 292 (408)
.+..+..|+.
T Consensus 405 ~~~~~~~~f~ 414 (457)
T 1kt0_A 405 DRRIYANMFK 414 (457)
T ss_dssp HHHHHHHC--
T ss_pred HHHHHHHHHh
Confidence 7534444443
No 176
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.25 E-value=1.4e-05 Score=58.97 Aligned_cols=94 Identities=11% Similarity=-0.084 Sum_probs=56.8
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHh
Q 015370 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 239 (408)
Q Consensus 160 ~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~ 239 (408)
+..+...+.+.|++++|...|++..+.. +.+...|..+..++...|++++|+..|++..+.... +...+..+..++..
T Consensus 20 ~~~~g~~~~~~g~~~~A~~~~~~al~~~-P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~-~~~~~~~la~~~~~ 97 (121)
T 1hxi_A 20 PMEEGLSMLKLANLAEAALAFEAVCQKE-PEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPK-DIAVHAALAVSHTN 97 (121)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHH
Confidence 3444555666666666666666666543 335566666666666666666666666666654322 44555566666666
Q ss_pred cCCHHHHHHHHHHHhc
Q 015370 240 TLNIDQVKKFLDEMSC 255 (408)
Q Consensus 240 ~g~~~~a~~~~~~~~~ 255 (408)
.|++++|...+++..+
T Consensus 98 ~g~~~~A~~~~~~al~ 113 (121)
T 1hxi_A 98 EHNANAALASLRAWLL 113 (121)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHH
Confidence 6666666666666654
No 177
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.19 E-value=6.7e-06 Score=60.23 Aligned_cols=87 Identities=13% Similarity=-0.042 Sum_probs=56.2
Q ss_pred cCchhhhHHHHHHHHHHhc--ccCccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHH
Q 015370 276 ASHLVNAESSTLVEAEKSI--TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 353 (408)
Q Consensus 276 ~~~~~~a~~~~~~~~~~~~--~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A 353 (408)
.|++++|+. .+.+..+.+ .+.+...|..+...|...|++++|.+.|++..+.... +...+..+..++...|++++|
T Consensus 3 ~g~~~~A~~-~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A 80 (117)
T 3k9i_A 3 LGLEAQAVP-YYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPN-HQALRVFYAMVLYNLGRYEQG 80 (117)
T ss_dssp ----CCCHH-HHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHH
T ss_pred CCcHHHHHH-HHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHcCCHHHH
Confidence 466677777 666666543 2234566677777777777777777777777665432 455666677777777888888
Q ss_pred HHHHHHHHhhC
Q 015370 354 GEIIDQWKQSA 364 (408)
Q Consensus 354 ~~~~~~~~~~~ 364 (408)
...+++..+..
T Consensus 81 ~~~~~~al~~~ 91 (117)
T 3k9i_A 81 VELLLKIIAET 91 (117)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhC
Confidence 88777777654
No 178
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.18 E-value=5e-05 Score=56.27 Aligned_cols=97 Identities=10% Similarity=0.003 Sum_probs=66.0
Q ss_pred HHHHHHHHHcCchhhhHHHHHHHHHHhcccCcc--chHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCC--hhhHHHHHH
Q 015370 267 VNLVNIYITASHLVNAESSTLVEAEKSITQRQW--ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT--SRNYICILS 342 (408)
Q Consensus 267 ~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~--~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~--~~~~~~li~ 342 (408)
..+...+.+.|++++|.. .+..+....+.... ..+..+...+...|++++|...|++......... ...+..+..
T Consensus 6 ~~~a~~~~~~~~~~~A~~-~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~ 84 (129)
T 2xev_A 6 YNVAFDALKNGKYDDASQ-LFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGL 84 (129)
T ss_dssp HHHHHHHHHTTCHHHHHH-HHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHH-HHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHH
Confidence 345667777888888888 77777665443211 4666677777788888888888887766542211 344666777
Q ss_pred HHHhcCCHHHHHHHHHHHHhhC
Q 015370 343 SYLMLGHLKEVGEIIDQWKQSA 364 (408)
Q Consensus 343 ~~~~~g~~~~A~~~~~~~~~~~ 364 (408)
++...|++++|...|+++.+..
T Consensus 85 ~~~~~g~~~~A~~~~~~~~~~~ 106 (129)
T 2xev_A 85 SQYGEGKNTEAQQTLQQVATQY 106 (129)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHcCCHHHHHHHHHHHHHHC
Confidence 7778888888888888877753
No 179
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.18 E-value=1.8e-05 Score=61.05 Aligned_cols=26 Identities=12% Similarity=0.211 Sum_probs=13.4
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHh
Q 015370 337 YICILSSYLMLGHLKEVGEIIDQWKQ 362 (408)
Q Consensus 337 ~~~li~~~~~~g~~~~A~~~~~~~~~ 362 (408)
+..+...+...|++++|.+.+++..+
T Consensus 132 ~~~la~~~~~~g~~~~A~~~~~~a~~ 157 (164)
T 3ro3_A 132 CWSLGNAYTALGNHDQAMHFAEKHLE 157 (164)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 33444555555555555555555443
No 180
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.18 E-value=2.9e-06 Score=62.20 Aligned_cols=85 Identities=12% Similarity=0.017 Sum_probs=44.5
Q ss_pred CCCHHHHHHHHHHHHhCC--CCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHH
Q 015370 170 AKWTEKAEELFERVKQSN--LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 247 (408)
Q Consensus 170 ~~~~~~A~~~~~~m~~~~--~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~ 247 (408)
.|++++|+..|++..+.+ -+.+..+|..+...|...|++++|...|++..+.... +..++..+..++...|++++|.
T Consensus 3 ~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~ 81 (117)
T 3k9i_A 3 LGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPN-HQALRVFYAMVLYNLGRYEQGV 81 (117)
T ss_dssp ----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHcCCHHHHH
Confidence 355556666666655542 1223445555555666666666666666665554322 3445555555566666666666
Q ss_pred HHHHHHhc
Q 015370 248 KFLDEMSC 255 (408)
Q Consensus 248 ~~~~~~~~ 255 (408)
..+++...
T Consensus 82 ~~~~~al~ 89 (117)
T 3k9i_A 82 ELLLKIIA 89 (117)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66655554
No 181
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.14 E-value=0.00011 Score=54.33 Aligned_cols=93 Identities=8% Similarity=-0.075 Sum_probs=56.2
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHhCCCCCCh---hhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCC--HHHHHHHHHH
Q 015370 162 ALLHLYAGAKWTEKAEELFERVKQSNLSFNA---LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPD--IFTYNLWISS 236 (408)
Q Consensus 162 ~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~---~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~--~~~~~~ll~~ 236 (408)
.+...+.+.|++++|...|++..+.. +.+. ..+..+..++.+.|++++|...|+.......... ...+..+..+
T Consensus 7 ~~a~~~~~~~~~~~A~~~~~~~~~~~-p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~ 85 (129)
T 2xev_A 7 NVAFDALKNGKYDDASQLFLSFLELY-PNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLS 85 (129)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHC-SSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHC-CCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHH
Confidence 34455666677777777777666543 1222 3566666666677777777777776665432210 4455556666
Q ss_pred HHhcCCHHHHHHHHHHHhc
Q 015370 237 CAATLNIDQVKKFLDEMSC 255 (408)
Q Consensus 237 ~~~~g~~~~a~~~~~~~~~ 255 (408)
+...|++++|...|+++.+
T Consensus 86 ~~~~g~~~~A~~~~~~~~~ 104 (129)
T 2xev_A 86 QYGEGKNTEAQQTLQQVAT 104 (129)
T ss_dssp HHHTTCHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHH
Confidence 6667777777777766665
No 182
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.11 E-value=4.4e-05 Score=68.37 Aligned_cols=125 Identities=10% Similarity=-0.029 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhC---------------CCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhC
Q 015370 157 SETYTALLHLYAGAKWTEKAEELFERVKQS---------------NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 221 (408)
Q Consensus 157 ~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~---------------~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~ 221 (408)
...|..+...+.+.|++++|++.|++.++. --+.+..+|..+..+|.+.|++++|+..+++..+.
T Consensus 223 a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 302 (370)
T 1ihg_A 223 SEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEI 302 (370)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHh
Confidence 445777888888899999999988887761 01223456777777777777777777777777765
Q ss_pred CCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHH
Q 015370 222 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES 284 (408)
Q Consensus 222 g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~ 284 (408)
.. .+...+..+..+|...|++++|...|++..+. .+.+...+..+...+.+.++.+++.+
T Consensus 303 ~p-~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l--~P~~~~~~~~l~~~~~~~~~~~~a~k 362 (370)
T 1ihg_A 303 DP-SNTKALYRRAQGWQGLKEYDQALADLKKAQEI--APEDKAIQAELLKVKQKIKAQKDKEK 362 (370)
T ss_dssp CT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Cc-hhHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 32 24566777777777777777777777777662 23455566666666666666665554
No 183
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=98.10 E-value=1.8e-05 Score=61.70 Aligned_cols=98 Identities=12% Similarity=0.101 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhC-------CC----------CCChhhHHHHHHHHHhcCCHHHHHHHHHHHH
Q 015370 157 SETYTALLHLYAGAKWTEKAEELFERVKQS-------NL----------SFNALMYNEMMTLYMSVGQVEKVALVVEEIK 219 (408)
Q Consensus 157 ~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~-------~~----------~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~ 219 (408)
...+......+.+.|++++|+..|.+.... +- +.+...|..+..+|.+.|++++|+..++...
T Consensus 11 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al 90 (162)
T 3rkv_A 11 VEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVL 90 (162)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 445666667777777777777777776553 00 1133567777777777888888888877777
Q ss_pred hCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhc
Q 015370 220 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 255 (408)
Q Consensus 220 ~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~ 255 (408)
.... .+...|..+..++...|++++|...|++...
T Consensus 91 ~~~p-~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~ 125 (162)
T 3rkv_A 91 KREE-TNEKALFRRAKARIAAWKLDEAEEDLKLLLR 125 (162)
T ss_dssp HHST-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hcCC-cchHHHHHHHHHHHHHhcHHHHHHHHHHHHh
Confidence 6532 2566777777777778888888877777766
No 184
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=98.09 E-value=4.6e-05 Score=70.46 Aligned_cols=125 Identities=6% Similarity=-0.167 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCC-------------HHHHHHHHHHHHHcCchhhhHHHHHHHHHHh
Q 015370 227 IFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD-------------WVKYVNLVNIYITASHLVNAESSTLVEAEKS 293 (408)
Q Consensus 227 ~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~-------------~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~ 293 (408)
...+..+...+.+.|++++|...|++..+.....++ ...|..+..+|.+.|++++|+. .+.+....
T Consensus 268 a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~-~~~~al~~ 346 (457)
T 1kt0_A 268 AAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVE-CCDKALGL 346 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH-HHHHHHhc
Confidence 445666677777777888887777777662111111 3445555555555555555555 45544443
Q ss_pred cccCccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHH
Q 015370 294 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 354 (408)
Q Consensus 294 ~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~ 354 (408)
.+. +...|..+..+|...|++++|...|++..+.... +...+..+..++.+.++.++|.
T Consensus 347 ~p~-~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~-~~~a~~~l~~~~~~~~~~~~a~ 405 (457)
T 1kt0_A 347 DSA-NEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQ-NKAARLQISMCQKKAKEHNERD 405 (457)
T ss_dssp STT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC-----CHHHHHHHHHHHHHHHHHHH
T ss_pred CCc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHHHHHHHH
Confidence 322 3444555555555555555555555554443211 2333444444455555544443
No 185
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.09 E-value=2.8e-05 Score=72.29 Aligned_cols=120 Identities=13% Similarity=-0.003 Sum_probs=84.4
Q ss_pred HHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCH
Q 015370 164 LHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 243 (408)
Q Consensus 164 l~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~ 243 (408)
...+.+.|++++|.+.|++..+.. +.+..+|..+..+|.+.|++++|...+++..+.... +..++..+..+|...|++
T Consensus 13 g~~~~~~g~~~~A~~~~~~Al~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~-~~~~~~~lg~~~~~~g~~ 90 (477)
T 1wao_1 13 ANDYFKAKDYENAIKFYSQAIELN-PSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKF 90 (477)
T ss_dssp SSSTTTTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHhCCHHHHHHHHHHHHHhC-CccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCH
Confidence 344567788888888888887764 345778888888888888888888888888876432 567777788888888888
Q ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHH--HHHcCchhhhHHHHHH
Q 015370 244 DQVKKFLDEMSCDSGGSDDWVKYVNLVNI--YITASHLVNAESSTLV 288 (408)
Q Consensus 244 ~~a~~~~~~~~~~~~~~~~~~~~~~li~~--~~~~~~~~~a~~~~~~ 288 (408)
++|.+.|++..+.. +.+...+..+..+ +.+.|++++|.+ .++
T Consensus 91 ~eA~~~~~~al~~~--p~~~~~~~~l~~~~~~~~~g~~~~A~~-~~~ 134 (477)
T 1wao_1 91 RAALRDYETVVKVK--PHDKDAKMKYQECNKIVKQKAFERAIA-GDE 134 (477)
T ss_dssp HHHHHHHHHHHHHS--TTCTTHHHHHHHHHHHHHHHHHCCC------
T ss_pred HHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHHHhc-ccc
Confidence 88888888877632 2333444455444 777888888888 555
No 186
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.04 E-value=3.3e-05 Score=69.19 Aligned_cols=139 Identities=9% Similarity=-0.032 Sum_probs=91.6
Q ss_pred hhHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHHHHhcCCCCCCCHHHHHHHHHHHH
Q 015370 89 SELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYA 168 (408)
Q Consensus 89 ~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~ll~~~~ 168 (408)
..+..+...+.+.|++++|++.|++..+.- +... .....+.+.. + .+.+..+|..+..+|.
T Consensus 224 ~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~---~~~~----------~~~~~~~~~~----~--~~~~~~~~~nla~~~~ 284 (370)
T 1ihg_A 224 EDLKNIGNTFFKSQNWEMAIKKYTKVLRYV---EGSR----------AAAEDADGAK----L--QPVALSCVLNIGACKL 284 (370)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHH---HHHH----------HHSCHHHHGG----G--HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHh---hcCc----------cccChHHHHH----H--HHHHHHHHHHHHHHHH
Confidence 346677788888889999988888887631 1100 0001111110 0 0134677778888888
Q ss_pred cCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHH
Q 015370 169 GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 248 (408)
Q Consensus 169 ~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~ 248 (408)
+.|++++|++.+++.++.. +.+..+|..+..+|...|++++|...|++..+.... +...+..+..++...++.+++.+
T Consensus 285 ~~g~~~~A~~~~~~al~~~-p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~-~~~~~~~l~~~~~~~~~~~~a~k 362 (370)
T 1ihg_A 285 KMSDWQGAVDSCLEALEID-PSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPE-DKAIQAELLKVKQKIKAQKDKEK 362 (370)
T ss_dssp HTTCHHHHHHHHHHHHTTC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccCHHHHHHHHHHHHHhC-chhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888888888764 346677888888888888888888888887765322 55666666666666776666544
No 187
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=98.03 E-value=6e-05 Score=58.65 Aligned_cols=100 Identities=9% Similarity=0.057 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHHHcCchhhhHHHHHHHHHHhc-----------------ccCccchHHHHHHHHHhcCCHHHHHHHHHHH
Q 015370 263 WVKYVNLVNIYITASHLVNAESSTLVEAEKSI-----------------TQRQWITYDFLIILYAGLGNKDKIDQIWKSL 325 (408)
Q Consensus 263 ~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~-----------------~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m 325 (408)
...+......+.+.|++++|.. .+....... .+.+...|..+..+|.+.|++++|+..+++.
T Consensus 11 a~~~~~~G~~~~~~~~~~~A~~-~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~a 89 (162)
T 3rkv_A 11 VEALRQKGNELFVQKDYKEAID-AYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEV 89 (162)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHH-HHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHH-HHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 4557788888999999999999 888776651 1223467888888888999999999999888
Q ss_pred HhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhhC
Q 015370 326 RMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364 (408)
Q Consensus 326 ~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~ 364 (408)
.+... .+...|..+..+|...|++++|...|++..+..
T Consensus 90 l~~~p-~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~ 127 (162)
T 3rkv_A 90 LKREE-TNEKALFRRAKARIAAWKLDEAEEDLKLLLRNH 127 (162)
T ss_dssp HHHST-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HhcCC-cchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcC
Confidence 77642 256678888888999999999999999888753
No 188
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.01 E-value=0.00019 Score=68.00 Aligned_cols=173 Identities=8% Similarity=0.011 Sum_probs=139.1
Q ss_pred cHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcC----------hHHHHHHHhcCCCC-CCCHHHHHHHHHHHHcCC
Q 015370 103 RYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFG----------IHSGERYFEGLPLS-AKTSETYTALLHLYAGAK 171 (408)
Q Consensus 103 ~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~----------~~~a~~~~~~~~~~-~~~~~~~~~ll~~~~~~~ 171 (408)
.-++|++.++.+.+.. +-+...|+.--.++...|+ ++++++.++.+... +.+..+|+.-...+.+.+
T Consensus 44 ~~eeal~~~~~~l~~n--P~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~ 121 (567)
T 1dce_A 44 LDESVLELTSQILGAN--PDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLP 121 (567)
T ss_dssp CSHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCS
T ss_pred CCHHHHHHHHHHHHHC--chhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcc
Confidence 4568899999999864 4456678877777777777 89999999988766 467889999999999999
Q ss_pred --CHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcC-CHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhc--------
Q 015370 172 --WTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG-QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT-------- 240 (408)
Q Consensus 172 --~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g-~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~-------- 240 (408)
+++++++.++++.+.+ +-|..+|+.-...+.+.| .++++++.++++.+..+. |..+|+.....+.+.
T Consensus 122 ~~~~~~el~~~~k~l~~d-~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~-n~saW~~r~~ll~~l~~~~~~~~ 199 (567)
T 1dce_A 122 EPNWARELELCARFLEAD-ERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFS-NYSSWHYRSCLLPQLHPQPDSGP 199 (567)
T ss_dssp SCCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCC-CHHHHHHHHHHHHHHSCCCCSSS
T ss_pred cccHHHHHHHHHHHHhhc-cccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCC-CccHHHHHHHHHHhhcccccccc
Confidence 7799999999999987 458889999888888999 899999999999987654 788888877776663
Q ss_pred ------CCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhh
Q 015370 241 ------LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 281 (408)
Q Consensus 241 ------g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~ 281 (408)
+.++++.+.+++.... .+.+...|.-+-..+.+.++.++
T Consensus 200 ~~~~~~~~~~eel~~~~~ai~~--~P~~~saW~y~~~ll~~~~~~~~ 244 (567)
T 1dce_A 200 QGRLPENVLLKELELVQNAFFT--DPNDQSAWFYHRWLLGRAEPHDV 244 (567)
T ss_dssp CCSSCHHHHHHHHHHHHHHHHH--CSSCSHHHHHHHHHHSCCCCCSC
T ss_pred cccccHHHHHHHHHHHHHHHhh--CCCCccHHHHHHHHHhcCCCccc
Confidence 5578888888888763 45677778888777777776443
No 189
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.00 E-value=2.4e-05 Score=72.75 Aligned_cols=88 Identities=11% Similarity=-0.003 Sum_probs=43.1
Q ss_pred HHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCHH
Q 015370 237 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKD 316 (408)
Q Consensus 237 ~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~ 316 (408)
+.+.|++++|.+.+++..+. .+.+...|..+..+|.+.|++++|.. .+++..+..+ .+...|..+..+|...|+++
T Consensus 16 ~~~~g~~~~A~~~~~~Al~~--~p~~~~~~~~lg~~~~~~g~~~~A~~-~~~~al~l~p-~~~~~~~~lg~~~~~~g~~~ 91 (477)
T 1wao_1 16 YFKAKDYENAIKFYSQAIEL--NPSNAIYYGNRSLAYLRTECYGYALG-DATRAIELDK-KYIKGYYRRAASNMALGKFR 91 (477)
T ss_dssp TTTTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHSCT-TCHHHHHHHHHHHHHHTCHH
T ss_pred HHHhCCHHHHHHHHHHHHHh--CCccHHHHHHHHHHHHHhcCHHHHHH-HHHHHHHhCC-CCHHHHHHHHHHHHHcCCHH
Confidence 34455555555555555542 23334445555555555555555555 4444444322 13444445555555555555
Q ss_pred HHHHHHHHHHhc
Q 015370 317 KIDQIWKSLRMT 328 (408)
Q Consensus 317 ~a~~~~~~m~~~ 328 (408)
+|.+.|++..+.
T Consensus 92 eA~~~~~~al~~ 103 (477)
T 1wao_1 92 AALRDYETVVKV 103 (477)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 555555544443
No 190
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=97.95 E-value=0.0002 Score=54.82 Aligned_cols=97 Identities=9% Similarity=-0.105 Sum_probs=66.3
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhccCCC------C-----hhhHHHHHHHHHhcCCHHHHHHHHHHHHhh----CCC
Q 015370 302 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKM------T-----SRNYICILSSYLMLGHLKEVGEIIDQWKQS----ATS 366 (408)
Q Consensus 302 ~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p------~-----~~~~~~li~~~~~~g~~~~A~~~~~~~~~~----~~~ 366 (408)
+......+.+.|++++|++.|++..+..... + ...|..+..++.+.|++++|+..+++.++. +..
T Consensus 14 ~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e~ 93 (159)
T 2hr2_A 14 ALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGEL 93 (159)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccccC
Confidence 3344555666677777777777665543221 1 126777777888888888888888887764 112
Q ss_pred CC-CHHHH----HHHHHHHHhcCChHHHHHHHHHHHh
Q 015370 367 DF-DISAC----NRLLGAFSDVGLTEKANEFHMLLLQ 398 (408)
Q Consensus 367 ~~-~~~~~----~~li~~~~~~g~~~~a~~~~~~m~~ 398 (408)
.| +...| .....++...|++++|+..|++.++
T Consensus 94 ~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAle 130 (159)
T 2hr2_A 94 NQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVE 130 (159)
T ss_dssp TSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHh
Confidence 34 45577 7888888888999999988888876
No 191
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=97.93 E-value=5.9e-05 Score=69.88 Aligned_cols=99 Identities=9% Similarity=-0.063 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHh-------CCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHh-----CCCC
Q 015370 157 SETYTALLHLYAGAKWTEKAEELFERVKQ-------SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR-----KNVV 224 (408)
Q Consensus 157 ~~~~~~ll~~~~~~~~~~~A~~~~~~m~~-------~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~-----~g~~ 224 (408)
..+++.|..+|...|++++|+.++++.++ .+.+-...+++.|...|...|++++|+.++++... .|..
T Consensus 351 a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~ 430 (490)
T 3n71_A 351 LRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPS 430 (490)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 34555555555555555555555554432 11111233566666666666666666666655432 1211
Q ss_pred -CC-HHHHHHHHHHHHhcCCHHHHHHHHHHHhc
Q 015370 225 -PD-IFTYNLWISSCAATLNIDQVKKFLDEMSC 255 (408)
Q Consensus 225 -p~-~~~~~~ll~~~~~~g~~~~a~~~~~~~~~ 255 (408)
|+ ..+...+-.++...+.+++|+.++..+.+
T Consensus 431 Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~ 463 (490)
T 3n71_A 431 HPITKDLEAMRMQTEMELRMFRQNEFMYHKMRE 463 (490)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 22334444455556666666666666554
No 192
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=97.89 E-value=5.6e-05 Score=66.82 Aligned_cols=148 Identities=11% Similarity=-0.016 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHH
Q 015370 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 236 (408)
Q Consensus 157 ~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~ 236 (408)
...+..+...+.+.|++++|...|++..... |+... +...|+++++...+. ...|..+..+
T Consensus 179 a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~--p~~~~-------~~~~~~~~~~~~~l~----------~~~~~nla~~ 239 (338)
T 2if4_A 179 ADRRKMDGNSLFKEEKLEEAMQQYEMAIAYM--GDDFM-------FQLYGKYQDMALAVK----------NPCHLNIAAC 239 (338)
T ss_dssp HHHHHHHHHHTCSSSCCHHHHHHHHHHHHHS--CHHHH-------HTCCHHHHHHHHHHH----------THHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHh--ccchh-------hhhcccHHHHHHHHH----------HHHHHHHHHH
Confidence 5567778888888899999999998877653 33321 111222222221110 1244445555
Q ss_pred HHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHH-HHhcCCH
Q 015370 237 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIIL-YAGLGNK 315 (408)
Q Consensus 237 ~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~-~~~~~~~ 315 (408)
+.+.|++++|+..+++..+. .+.+...|..+..+|...|++++|.. .+....+..+. +...+..+... ....+..
T Consensus 240 ~~~~g~~~~A~~~~~~al~~--~p~~~~a~~~lg~a~~~~g~~~~A~~-~l~~al~l~p~-~~~a~~~L~~l~~~~~~~~ 315 (338)
T 2if4_A 240 LIKLKRYDEAIGHCNIVLTE--EEKNPKALFRRGKAKAELGQMDSARD-DFRKAQKYAPD-DKAIRRELRALAEQEKALY 315 (338)
T ss_dssp HHTTTCCHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHTTTCHHHHHH-HHHHTTC------------------------
T ss_pred HHHcCCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHcCCHHHHHH-HHHHHHHHCCC-CHHHHHHHHHHHHHHHHHH
Confidence 55555555555555555442 23344455555555555555555555 44444332221 23333333333 1223445
Q ss_pred HHHHHHHHHHHh
Q 015370 316 DKIDQIWKSLRM 327 (408)
Q Consensus 316 ~~a~~~~~~m~~ 327 (408)
+++..+|..|..
T Consensus 316 ~~a~~~~~~~l~ 327 (338)
T 2if4_A 316 QKQKEMYKGIFK 327 (338)
T ss_dssp ------------
T ss_pred HHHHHHHHHhhC
Confidence 555555555543
No 193
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=97.86 E-value=8.8e-05 Score=56.78 Aligned_cols=107 Identities=8% Similarity=0.001 Sum_probs=60.1
Q ss_pred hhHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHHHHhcCCCCCCCHHHHHHHHHHHH
Q 015370 89 SELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYA 168 (408)
Q Consensus 89 ~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~ll~~~~ 168 (408)
..+......+.+.|++++|++.|++..+..+-.|+. +.+...+.+...|+.+..++.
T Consensus 12 ~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~-----------------------~a~~~~~~~a~a~~n~g~al~ 68 (159)
T 2hr2_A 12 YLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPE-----------------------EAFDHAGFDAFCHAGLAEALA 68 (159)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTT-----------------------SCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcch-----------------------hhhhhccchHHHHHHHHHHHH
Confidence 344555566666677777777777666643111111 000000012336777777777
Q ss_pred cCCCHHHHHHHHHHHHhC-------CCCCChhhH----HHHHHHHHhcCCHHHHHHHHHHHH
Q 015370 169 GAKWTEKAEELFERVKQS-------NLSFNALMY----NEMMTLYMSVGQVEKVALVVEEIK 219 (408)
Q Consensus 169 ~~~~~~~A~~~~~~m~~~-------~~~p~~~~~----~~li~~~~~~g~~~~a~~~~~~m~ 219 (408)
+.|++++|+..+++.++. + +-+...| .....++...|++++|+..|++..
T Consensus 69 ~Lgr~~eAl~~~~kAL~l~n~~~e~~-pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAl 129 (159)
T 2hr2_A 69 GLRSFDEALHSADKALHYFNRRGELN-QDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVV 129 (159)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHCCTT-STHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHhhhccccCC-CchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHH
Confidence 777777777777766654 3 2234456 666666666777777777666654
No 194
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=97.84 E-value=7.5e-05 Score=69.15 Aligned_cols=124 Identities=4% Similarity=-0.135 Sum_probs=73.1
Q ss_pred cCCCHHHHHHHHHHHHhC---CCCC----ChhhHHHHHHHHHhcCCHHHHHHHHHHHHh-----CCC-CCC-HHHHHHHH
Q 015370 169 GAKWTEKAEELFERVKQS---NLSF----NALMYNEMMTLYMSVGQVEKVALVVEEIKR-----KNV-VPD-IFTYNLWI 234 (408)
Q Consensus 169 ~~~~~~~A~~~~~~m~~~---~~~p----~~~~~~~li~~~~~~g~~~~a~~~~~~m~~-----~g~-~p~-~~~~~~ll 234 (408)
..|++++|+.++++.++. -+.| ...+++.|..+|...|++++|+.++++... .|. -|+ ..+++.|.
T Consensus 321 ~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa 400 (490)
T 3n71_A 321 SEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAG 400 (490)
T ss_dssp TTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 456677777666665432 1111 234677777777777777777777766542 121 122 35667777
Q ss_pred HHHHhcCCHHHHHHHHHHHhcC----CC--CCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHh
Q 015370 235 SSCAATLNIDQVKKFLDEMSCD----SG--GSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 293 (408)
Q Consensus 235 ~~~~~~g~~~~a~~~~~~~~~~----~~--~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~ 293 (408)
..|...|++++|+.++++..+- .| .+....+.+.+..++...+.+++|.. ++..+.+.
T Consensus 401 ~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~-~~~~~~~~ 464 (490)
T 3n71_A 401 LTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEF-MYHKMREA 464 (490)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 7777777777777776655321 11 11223335566666777777777777 66666553
No 195
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=97.84 E-value=0.00031 Score=52.97 Aligned_cols=111 Identities=11% Similarity=-0.015 Sum_probs=66.3
Q ss_pred ccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHHHHhcCCCCCCCHHHHHHHHHHHHc----CCCHHHHH
Q 015370 102 QRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAG----AKWTEKAE 177 (408)
Q Consensus 102 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~ll~~~~~----~~~~~~A~ 177 (408)
+++++|++.|++..+.| .|+.. +...|...+.+++|.++|++.... .+...+..|...|.. .++.++|+
T Consensus 9 ~d~~~A~~~~~~aa~~g--~~~a~----lg~~y~~g~~~~~A~~~~~~Aa~~-g~~~a~~~Lg~~y~~G~g~~~d~~~A~ 81 (138)
T 1klx_A 9 KDLKKAIQYYVKACELN--EMFGC----LSLVSNSQINKQKLFQYLSKACEL-NSGNGCRFLGDFYENGKYVKKDLRKAA 81 (138)
T ss_dssp HHHHHHHHHHHHHHHTT--CTTHH----HHHHTCTTSCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHCSSSCCCHHHHH
T ss_pred cCHHHHHHHHHHHHcCC--CHhhh----HHHHHHcCCCHHHHHHHHHHHHcC-CCHHHHHHHHHHHHcCCCCCccHHHHH
Confidence 46667777777777665 33322 445555555566666666655442 455566666666655 56666666
Q ss_pred HHHHHHHhCCCCCChhhHHHHHHHHHh----cCCHHHHHHHHHHHHhCC
Q 015370 178 ELFERVKQSNLSFNALMYNEMMTLYMS----VGQVEKVALVVEEIKRKN 222 (408)
Q Consensus 178 ~~~~~m~~~~~~p~~~~~~~li~~~~~----~g~~~~a~~~~~~m~~~g 222 (408)
+.|++..+.| ++.++..|...|.. .+++++|...|++..+.|
T Consensus 82 ~~~~~Aa~~g---~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g 127 (138)
T 1klx_A 82 QYYSKACGLN---DQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLG 127 (138)
T ss_dssp HHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcCC---CHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHCC
Confidence 6666666655 45566666666665 566666666666666554
No 196
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=97.83 E-value=0.00099 Score=63.12 Aligned_cols=139 Identities=8% Similarity=-0.060 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcC--chhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcC-CHHHHH
Q 015370 243 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS--HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG-NKDKID 319 (408)
Q Consensus 243 ~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~--~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~-~~~~a~ 319 (408)
++++.+.++.+.+. .+-+..+|+.-.-.+.+.+ ++++++. .+.++.+..+. +..+|+.-...+.+.| .+++++
T Consensus 89 ~~~eL~~~~~~l~~--~pK~y~aW~hR~w~l~~l~~~~~~~el~-~~~k~l~~d~~-N~~aW~~R~~~l~~l~~~~~~el 164 (567)
T 1dce_A 89 VKAELGFLESCLRV--NPKSYGTWHHRCWLLSRLPEPNWARELE-LCARFLEADER-NFHCWDYRRFVAAQAAVAPAEEL 164 (567)
T ss_dssp HHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHTCSSCCHHHHHH-HHHHHHHHCTT-CHHHHHHHHHHHHHTCCCHHHHH
T ss_pred HHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHcccccHHHHHH-HHHHHHhhccc-cccHHHHHHHHHHHcCCChHHHH
Confidence 44444444444441 2334444444444444444 3355555 44444444322 4455555444445555 555555
Q ss_pred HHHHHHHhccCCCChhhHHHHHHHHHh--------------cCCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHhcCC
Q 015370 320 QIWKSLRMTKQKMTSRNYICILSSYLM--------------LGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGL 385 (408)
Q Consensus 320 ~~~~~m~~~~~~p~~~~~~~li~~~~~--------------~g~~~~A~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~ 385 (408)
+.++++.+..+. |...|+.....+.+ .+.++++++.+++.+... +-|...|+-+-..+.+.++
T Consensus 165 ~~~~~~I~~~p~-n~saW~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~--P~~~saW~y~~~ll~~~~~ 241 (567)
T 1dce_A 165 AFTDSLITRNFS-NYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTD--PNDQSAWFYHRWLLGRAEP 241 (567)
T ss_dssp HHHHTTTTTTCC-CHHHHHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHC--SSCSHHHHHHHHHHSCCCC
T ss_pred HHHHHHHHHCCC-CccHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHhhC--CCCccHHHHHHHHHhcCCC
Confidence 555555443322 33344433333332 255788999999888764 4577888888887777776
Q ss_pred hHH
Q 015370 386 TEK 388 (408)
Q Consensus 386 ~~~ 388 (408)
.++
T Consensus 242 ~~~ 244 (567)
T 1dce_A 242 HDV 244 (567)
T ss_dssp CSC
T ss_pred ccc
Confidence 544
No 197
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=97.82 E-value=2.5e-05 Score=56.18 Aligned_cols=92 Identities=8% Similarity=-0.030 Sum_probs=57.7
Q ss_pred CHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCC-------HH
Q 015370 156 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPD-------IF 228 (408)
Q Consensus 156 ~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~-------~~ 228 (408)
+...|..+...+.+.|++++|.+.|++..+.. +.+...|..+..++.+.|++++|...+++..+.. |+ ..
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~~~ 79 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQ-PQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYT--STAEHVAIRSK 79 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSC--SSTTSHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC--CCccHHHHHHH
Confidence 34566667777777777777777777776653 3456677777777777777777777777777643 33 33
Q ss_pred HHHHHHHHHHhcCCHHHHHHHH
Q 015370 229 TYNLWISSCAATLNIDQVKKFL 250 (408)
Q Consensus 229 ~~~~ll~~~~~~g~~~~a~~~~ 250 (408)
.+..+..++...|+.+.+...+
T Consensus 80 ~~~~~~~~~~~~~~~~~a~~~~ 101 (111)
T 2l6j_A 80 LQYRLELAQGAVGSVQIPVVEV 101 (111)
T ss_dssp HHHHHHHHHHHHHCCCCCSSSS
T ss_pred HHHHHHHHHHHHHhHhhhHhHH
Confidence 3444444555555544444333
No 198
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=97.80 E-value=2.5e-05 Score=69.10 Aligned_cols=94 Identities=10% Similarity=-0.051 Sum_probs=39.1
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCC-HHHHHHHHHH-
Q 015370 159 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPD-IFTYNLWISS- 236 (408)
Q Consensus 159 ~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~-~~~~~~ll~~- 236 (408)
+|..+..+|.+.|++++|+..+++.++.. +.+..+|..+..+|...|++++|...|++..+. .|+ ...+..+...
T Consensus 232 ~~~nla~~~~~~g~~~~A~~~~~~al~~~-p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l--~p~~~~a~~~L~~l~ 308 (338)
T 2if4_A 232 CHLNIAACLIKLKRYDEAIGHCNIVLTEE-EKNPKALFRRGKAKAELGQMDSARDDFRKAQKY--APDDKAIRRELRALA 308 (338)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC------------------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH--CCCCHHHHHHHHHHH
Confidence 56666666666666666666666666543 335556666666666666666666666666543 222 2223322222
Q ss_pred HHhcCCHHHHHHHHHHHhc
Q 015370 237 CAATLNIDQVKKFLDEMSC 255 (408)
Q Consensus 237 ~~~~g~~~~a~~~~~~~~~ 255 (408)
....+..+.+...|..|..
T Consensus 309 ~~~~~~~~~a~~~~~~~l~ 327 (338)
T 2if4_A 309 EQEKALYQKQKEMYKGIFK 327 (338)
T ss_dssp -------------------
T ss_pred HHHHHHHHHHHHHHHHhhC
Confidence 1223344455555555543
No 199
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=97.76 E-value=0.00013 Score=52.90 Aligned_cols=78 Identities=8% Similarity=-0.021 Sum_probs=42.9
Q ss_pred HHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhc
Q 015370 176 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 255 (408)
Q Consensus 176 A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~ 255 (408)
|+..|++..+.. +.+...|..+...|...|++++|...|++...... .+...|..+..++...|++++|...|++..+
T Consensus 4 a~~~~~~al~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p-~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 81 (115)
T 2kat_A 4 ITERLEAMLAQG-TDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDP-TYSVAWKWLGKTLQGQGDRAGARQAWESGLA 81 (115)
T ss_dssp HHHHHHHHHTTT-CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC-CCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCC-CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 445555555443 33455555666666666666666666666555422 1344555555566666666666666655544
No 200
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=97.67 E-value=0.00023 Score=51.53 Aligned_cols=64 Identities=9% Similarity=-0.128 Sum_probs=32.0
Q ss_pred ccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 015370 298 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ 362 (408)
Q Consensus 298 ~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~ 362 (408)
+...|..+...|...|++++|...|++..+... .+...|..+..+|...|++++|...|++..+
T Consensus 18 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p-~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 81 (115)
T 2kat_A 18 NMLLRFTLGKTYAEHEQFDAALPHLRAALDFDP-TYSVAWKWLGKTLQGQGDRAGARQAWESGLA 81 (115)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCC-CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 334444555555555555555555555444321 1233444555555555555555555555543
No 201
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=97.66 E-value=0.00041 Score=49.55 Aligned_cols=92 Identities=7% Similarity=-0.146 Sum_probs=67.7
Q ss_pred CChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCC------H
Q 015370 190 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD------W 263 (408)
Q Consensus 190 p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~------~ 263 (408)
++...|..+...+...|++++|...|++..+... .+...+..+..++...|++++|.+.+++..+. .+.+ .
T Consensus 2 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p-~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--~p~~~~~~~~~ 78 (111)
T 2l6j_A 2 SQFEKQKEQGNSLFKQGLYREAVHCYDQLITAQP-QNPVGYSNKAMALIKLGEYTQAIQMCQQGLRY--TSTAEHVAIRS 78 (111)
T ss_dssp THHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS--CSSTTSHHHHH
T ss_pred chHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC-CCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--CCCccHHHHHH
Confidence 3567788888889999999999999998887543 26777888888889999999999999988873 2223 4
Q ss_pred HHHHHHHHHHHHcCchhhhHH
Q 015370 264 VKYVNLVNIYITASHLVNAES 284 (408)
Q Consensus 264 ~~~~~li~~~~~~~~~~~a~~ 284 (408)
..+..+..++...|+.+.|..
T Consensus 79 ~~~~~~~~~~~~~~~~~~a~~ 99 (111)
T 2l6j_A 79 KLQYRLELAQGAVGSVQIPVV 99 (111)
T ss_dssp HHHHHHHHHHHHHHCCCCCSS
T ss_pred HHHHHHHHHHHHHHhHhhhHh
Confidence 445556666666666655554
No 202
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=97.65 E-value=0.00066 Score=46.37 Aligned_cols=64 Identities=14% Similarity=0.162 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhC
Q 015370 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 221 (408)
Q Consensus 157 ~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~ 221 (408)
...+..+...+.+.|++++|...|++..+.. +.+..++..+...+.+.|++++|...+++..+.
T Consensus 9 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 72 (91)
T 1na3_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELD-PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALEL 72 (91)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 3445555555555555555555555555442 224445555555555555555555555555543
No 203
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=97.60 E-value=0.0028 Score=55.55 Aligned_cols=134 Identities=11% Similarity=-0.044 Sum_probs=67.6
Q ss_pred cCCCCChhhHHHHHHHHHhc-----ccHHHHHHHHHHHHhccCCCCC-hHHHHHHHHHHHhh---c--------ChHHHH
Q 015370 82 EGNQATVSELRHILKELRKS-----QRYKHALEISEWMVTHKEFVLS-DSDYATRIDLMTKV---F--------GIHSGE 144 (408)
Q Consensus 82 ~g~~~~~~~~~~li~~~~~~-----~~~~~a~~~~~~~~~~~~~~~~-~~~~~~li~~~~~~---g--------~~~~a~ 144 (408)
.+.+.+...|...+++.... ....+|..+|++..+.. |+ ...|..+.-++... + ....+.
T Consensus 188 ~~~p~~~~Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lD---P~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~ 264 (372)
T 3ly7_A 188 KILPHRGALLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSS---PEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEI 264 (372)
T ss_dssp HHSCSSGGGHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHC---TTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC---CCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHH
Confidence 33566777777777665432 34578888888888753 44 34444433333210 0 001111
Q ss_pred HHHhcCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 015370 145 RYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 220 (408)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~ 220 (408)
+-...+...+.+..+|..+...+...|++++|...+++....+ |+...|..+...+.-.|++++|.+.|++...
T Consensus 265 ~a~~a~~~~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln--~s~~a~~llG~~~~~~G~~~eA~e~~~~Alr 338 (372)
T 3ly7_A 265 DNIVTLPELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLE--MSWLNYVLLGKVYEMKGMNREAADAYLTAFN 338 (372)
T ss_dssp HHHHTCGGGTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHhcccCCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 1111122213345555555444444455555555555555543 4444555555555555555555555555554
No 204
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=97.59 E-value=0.0017 Score=48.82 Aligned_cols=109 Identities=8% Similarity=-0.064 Sum_probs=49.4
Q ss_pred CHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHh----cCCHHH
Q 015370 242 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAG----LGNKDK 317 (408)
Q Consensus 242 ~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~----~~~~~~ 317 (408)
++++|.+.|++..+. + .+... |...|...+.+++|.+ .+++..+.+ +...+..|...|.. .+++++
T Consensus 10 d~~~A~~~~~~aa~~-g-~~~a~----lg~~y~~g~~~~~A~~-~~~~Aa~~g---~~~a~~~Lg~~y~~G~g~~~d~~~ 79 (138)
T 1klx_A 10 DLKKAIQYYVKACEL-N-EMFGC----LSLVSNSQINKQKLFQ-YLSKACELN---SGNGCRFLGDFYENGKYVKKDLRK 79 (138)
T ss_dssp HHHHHHHHHHHHHHT-T-CTTHH----HHHHTCTTSCHHHHHH-HHHHHHHTT---CHHHHHHHHHHHHHCSSSCCCHHH
T ss_pred CHHHHHHHHHHHHcC-C-CHhhh----HHHHHHcCCCHHHHHH-HHHHHHcCC---CHHHHHHHHHHHHcCCCCCccHHH
Confidence 455555555555542 3 12211 4444444445555555 444443332 33344444444444 445555
Q ss_pred HHHHHHHHHhccCCCChhhHHHHHHHHHh----cCCHHHHHHHHHHHHhh
Q 015370 318 IDQIWKSLRMTKQKMTSRNYICILSSYLM----LGHLKEVGEIIDQWKQS 363 (408)
Q Consensus 318 a~~~~~~m~~~~~~p~~~~~~~li~~~~~----~g~~~~A~~~~~~~~~~ 363 (408)
|.+.|++..+.| +...+..|...|.. .++.++|..+|++..+.
T Consensus 80 A~~~~~~Aa~~g---~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~ 126 (138)
T 1klx_A 80 AAQYYSKACGLN---DQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRL 126 (138)
T ss_dssp HHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCC---CHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHC
Confidence 555555444432 23334444444444 44555555555544443
No 205
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=97.58 E-value=0.00096 Score=45.52 Aligned_cols=82 Identities=13% Similarity=0.031 Sum_probs=56.2
Q ss_pred cchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCCHHHHHHHHH
Q 015370 299 WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLG 378 (408)
Q Consensus 299 ~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~li~ 378 (408)
...|..+...+...|++++|...+++..+... .+...+..+...+.+.|++++|...+++..+.. +.+...+..+..
T Consensus 9 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~-~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~--p~~~~~~~~l~~ 85 (91)
T 1na3_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDP-NNAEAWYNLGNAYYKQGDYDEAIEYYQKALELD--PNNAEAKQNLGN 85 (91)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCC-CCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC--CCCHHHHHHHHH
Confidence 44566677777778888888888877766532 245566777778888888888888888877754 335566666665
Q ss_pred HHHhc
Q 015370 379 AFSDV 383 (408)
Q Consensus 379 ~~~~~ 383 (408)
++.+.
T Consensus 86 ~~~~~ 90 (91)
T 1na3_A 86 AKQKQ 90 (91)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 55543
No 206
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=97.54 E-value=0.00039 Score=48.94 Aligned_cols=64 Identities=14% Similarity=0.008 Sum_probs=35.6
Q ss_pred ccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 015370 298 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ 362 (408)
Q Consensus 298 ~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~ 362 (408)
+...|..+...|...|++++|+..|++..+.... +...|..+..+|...|++++|.+.|++..+
T Consensus 6 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~ 69 (100)
T 3ma5_A 6 DPFTRYALAQEHLKHDNASRALALFEELVETDPD-YVGTYYHLGKLYERLDRTDDAIDTYAQGIE 69 (100)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 3344555555566666666666666655554322 334455556666666666666666665544
No 207
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=97.54 E-value=0.00062 Score=51.98 Aligned_cols=109 Identities=11% Similarity=0.035 Sum_probs=73.3
Q ss_pred HhcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHHHHhcCCCCCCCHHHHHHHHHHHHcCCCHHHHHH
Q 015370 99 RKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEE 178 (408)
Q Consensus 99 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~A~~ 178 (408)
.+.+.+++|++.++...+.. +.+...|..+..++...++++.+....+ .+++|+.
T Consensus 13 ~r~~~feeA~~~~~~Ai~l~--P~~aea~~n~G~~l~~l~~~~~g~~al~-----------------------~~~eAi~ 67 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKSN--PLDADNLTRWGGVLLELSQFHSISDAKQ-----------------------MIQEAIT 67 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHHHHHSCHHHHHH-----------------------HHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHhcccchhhhhHh-----------------------HHHHHHH
Confidence 45567888888888888764 5567788878888888777654443221 2677777
Q ss_pred HHHHHHhCCCCCChhhHHHHHHHHHhcC-----------CHHHHHHHHHHHHhCCCCCCHHHHHHHHH
Q 015370 179 LFERVKQSNLSFNALMYNEMMTLYMSVG-----------QVEKVALVVEEIKRKNVVPDIFTYNLWIS 235 (408)
Q Consensus 179 ~~~~m~~~~~~p~~~~~~~li~~~~~~g-----------~~~~a~~~~~~m~~~g~~p~~~~~~~ll~ 235 (408)
.|++.++.+ +-+..+|..+..+|...| ++++|.+.|++..+ +.|+...|..-+.
T Consensus 68 ~le~AL~ld-P~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~--l~P~~~~y~~al~ 132 (158)
T 1zu2_A 68 KFEEALLID-PKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVD--EQPDNTHYLKSLE 132 (158)
T ss_dssp HHHHHHHHC-TTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH--HCTTCHHHHHHHH
T ss_pred HHHHHHHhC-cCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHH--hCCCCHHHHHHHH
Confidence 777777764 335667777777777654 67777777777776 3455555544443
No 208
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=97.48 E-value=0.00014 Score=55.55 Aligned_cols=88 Identities=9% Similarity=0.005 Sum_probs=59.1
Q ss_pred HHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCH----------HHHHHHHHHHHhccCCCChhhHHHHHH
Q 015370 273 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK----------DKIDQIWKSLRMTKQKMTSRNYICILS 342 (408)
Q Consensus 273 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~----------~~a~~~~~~m~~~~~~p~~~~~~~li~ 342 (408)
..+.+.+++|.. .++...+..+. +...|+.+..++...+++ ++|+..|++..+.... +...|..+..
T Consensus 12 ~~r~~~feeA~~-~~~~Ai~l~P~-~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~-~~~A~~~LG~ 88 (158)
T 1zu2_A 12 FDRILLFEQIRQ-DAENTYKSNPL-DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK-KDEAVWCIGN 88 (158)
T ss_dssp HHHHHHHHHHHH-HHHHHHHHCTT-CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHH
T ss_pred HHHHhHHHHHHH-HHHHHHHHCCC-CHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcC-cHHHHHHHHH
Confidence 445667777777 67766665544 667777777777777654 4777777776665332 4556777777
Q ss_pred HHHhcC-----------CHHHHHHHHHHHHhh
Q 015370 343 SYLMLG-----------HLKEVGEIIDQWKQS 363 (408)
Q Consensus 343 ~~~~~g-----------~~~~A~~~~~~~~~~ 363 (408)
+|...| ++++|++.|++.++.
T Consensus 89 ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l 120 (158)
T 1zu2_A 89 AYTSFAFLTPDETEAKHNFDLATQFFQQAVDE 120 (158)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcccCcchhhhhccHHHHHHHHHHHHHh
Confidence 776653 677777777777764
No 209
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.43 E-value=0.026 Score=55.96 Aligned_cols=118 Identities=10% Similarity=0.091 Sum_probs=63.1
Q ss_pred HhhcChHHHHH-HHhcCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHH
Q 015370 135 TKVFGIHSGER-YFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 213 (408)
Q Consensus 135 ~~~g~~~~a~~-~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~ 213 (408)
...+++++|.+ ++..++ +......++..+.+.|..++|.++.++-. .-.......|++++|++
T Consensus 610 ~~~~~~~~a~~~~l~~i~----~~~~~~~~~~~l~~~~~~~~a~~~~~~~~------------~~f~~~l~~~~~~~A~~ 673 (814)
T 3mkq_A 610 TLRGEIEEAIENVLPNVE----GKDSLTKIARFLEGQEYYEEALNISPDQD------------QKFELALKVGQLTLARD 673 (814)
T ss_dssp HHTTCHHHHHHHTGGGCC----CHHHHHHHHHHHHHTTCHHHHHHHCCCHH------------HHHHHHHHHTCHHHHHH
T ss_pred HHhCCHHHHHHHHHhcCC----chHHHHHHHHHHHhCCChHHheecCCCcc------------hheehhhhcCCHHHHHH
Confidence 34566666666 544332 12222555666666666666665542111 01223345666666666
Q ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHH
Q 015370 214 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES 284 (408)
Q Consensus 214 ~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~ 284 (408)
+.+.+ .+...|..+...+.+.++++.|++.|.++.+ |..+...|...|+.+...+
T Consensus 674 ~~~~~------~~~~~W~~la~~al~~~~~~~A~~~y~~~~d----------~~~l~~l~~~~~~~~~~~~ 728 (814)
T 3mkq_A 674 LLTDE------SAEMKWRALGDASLQRFNFKLAIEAFTNAHD----------LESLFLLHSSFNNKEGLVT 728 (814)
T ss_dssp HHTTC------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHTC----------HHHHHHHHHHTTCHHHHHH
T ss_pred HHHhh------CcHhHHHHHHHHHHHcCCHHHHHHHHHHccC----------hhhhHHHHHHcCCHHHHHH
Confidence 64322 2456666677777777777777777766554 3344444555555554444
No 210
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=97.41 E-value=0.0005 Score=48.39 Aligned_cols=65 Identities=15% Similarity=0.089 Sum_probs=42.8
Q ss_pred CCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 015370 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 220 (408)
Q Consensus 155 ~~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~ 220 (408)
.+...+..+...|.+.|++++|+..|++..+.+ +.+..+|..+..+|...|++++|...|++..+
T Consensus 5 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~ 69 (100)
T 3ma5_A 5 EDPFTRYALAQEHLKHDNASRALALFEELVETD-PDYVGTYYHLGKLYERLDRTDDAIDTYAQGIE 69 (100)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 345666667777777777777777777766654 33455666677777777777777777666553
No 211
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=96.99 E-value=0.0037 Score=56.83 Aligned_cols=88 Identities=5% Similarity=-0.049 Sum_probs=62.7
Q ss_pred hcCCHHHHHHHHHHHHhcc---CCCC----hhhHHHHHHHHHhcCCHHHHHHHHHHHHh-----hCCCCCCH-HHHHHHH
Q 015370 311 GLGNKDKIDQIWKSLRMTK---QKMT----SRNYICILSSYLMLGHLKEVGEIIDQWKQ-----SATSDFDI-SACNRLL 377 (408)
Q Consensus 311 ~~~~~~~a~~~~~~m~~~~---~~p~----~~~~~~li~~~~~~g~~~~A~~~~~~~~~-----~~~~~~~~-~~~~~li 377 (408)
..|++++|+.++++..+.. +.|+ ..+++.|...|...|++++|+.++++..+ .|...|++ .+++.|.
T Consensus 310 ~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa 389 (433)
T 3qww_A 310 HYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLG 389 (433)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred hccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 3567888888887765431 2222 24577788888888999988888888754 23333443 4688888
Q ss_pred HHHHhcCChHHHHHHHHHHHh
Q 015370 378 GAFSDVGLTEKANEFHMLLLQ 398 (408)
Q Consensus 378 ~~~~~~g~~~~a~~~~~~m~~ 398 (408)
..|...|++++|..++++.++
T Consensus 390 ~~~~~qg~~~eA~~~~~~Al~ 410 (433)
T 3qww_A 390 RLYMGLENKAAGEKALKKAIA 410 (433)
T ss_dssp HHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHhccCHHHHHHHHHHHHH
Confidence 888889999999888887754
No 212
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=96.98 E-value=0.0015 Score=59.43 Aligned_cols=83 Identities=11% Similarity=-0.039 Sum_probs=52.7
Q ss_pred hcChHHHHHHHhcCCCC-----CCC----HHHHHHHHHHHHcCCCHHHHHHHHHHHHhC-----C-CCC-ChhhHHHHHH
Q 015370 137 VFGIHSGERYFEGLPLS-----AKT----SETYTALLHLYAGAKWTEKAEELFERVKQS-----N-LSF-NALMYNEMMT 200 (408)
Q Consensus 137 ~g~~~~a~~~~~~~~~~-----~~~----~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~-----~-~~p-~~~~~~~li~ 200 (408)
.|++++|+.++++.... +++ ..+++.|..+|...|++++|+.++++.++. | -.| ...+++.|..
T Consensus 311 ~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~ 390 (433)
T 3qww_A 311 YKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGR 390 (433)
T ss_dssp TSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Confidence 35566666665542211 222 466777788888888888887777776532 2 112 2346777777
Q ss_pred HHHhcCCHHHHHHHHHHHH
Q 015370 201 LYMSVGQVEKVALVVEEIK 219 (408)
Q Consensus 201 ~~~~~g~~~~a~~~~~~m~ 219 (408)
.|...|++++|+.+|++..
T Consensus 391 ~~~~qg~~~eA~~~~~~Al 409 (433)
T 3qww_A 391 LYMGLENKAAGEKALKKAI 409 (433)
T ss_dssp HHHHTTCHHHHHHHHHHHH
T ss_pred HHHhccCHHHHHHHHHHHH
Confidence 7888888888877777654
No 213
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=96.96 E-value=0.003 Score=57.48 Aligned_cols=62 Identities=8% Similarity=-0.024 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhC-----C--CCCChhhHHHHHHHHHhcCCHHHHHHHHHHH
Q 015370 157 SETYTALLHLYAGAKWTEKAEELFERVKQS-----N--LSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218 (408)
Q Consensus 157 ~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~-----~--~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m 218 (408)
..+++.|..+|...|++++|+.++++.+.. | .+-...+++.|...|...|++++|+.++++.
T Consensus 329 ~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~A 397 (429)
T 3qwp_A 329 LKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLA 397 (429)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 344555555555555555555555544321 1 1111234555555555555555555555443
No 214
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=96.90 E-value=0.0068 Score=55.15 Aligned_cols=93 Identities=11% Similarity=-0.026 Sum_probs=56.8
Q ss_pred HHHHHhcCCHHHHHHHHHHHHhcc---CCCC----hhhHHHHHHHHHhcCCHHHHHHHHHHHHh-----hCCCCCCH-HH
Q 015370 306 IILYAGLGNKDKIDQIWKSLRMTK---QKMT----SRNYICILSSYLMLGHLKEVGEIIDQWKQ-----SATSDFDI-SA 372 (408)
Q Consensus 306 i~~~~~~~~~~~a~~~~~~m~~~~---~~p~----~~~~~~li~~~~~~g~~~~A~~~~~~~~~-----~~~~~~~~-~~ 372 (408)
+..+.+.|++++|+.++++..+.. +.|+ ..+++.+...|...|++++|+.++++..+ .|...|++ .+
T Consensus 294 ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~ 373 (429)
T 3qwp_A 294 IEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQ 373 (429)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHH
T ss_pred HHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHH
Confidence 334456677777777777665431 1222 23466677777777777777777776653 12223332 35
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHHh
Q 015370 373 CNRLLGAFSDVGLTEKANEFHMLLLQ 398 (408)
Q Consensus 373 ~~~li~~~~~~g~~~~a~~~~~~m~~ 398 (408)
++.|...|...|++++|..++++..+
T Consensus 374 l~nLa~~~~~~g~~~eA~~~~~~Al~ 399 (429)
T 3qwp_A 374 VMKVGKLQLHQGMFPQAMKNLRLAFD 399 (429)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 67777777777777777777776543
No 215
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=96.88 E-value=0.0025 Score=44.36 Aligned_cols=59 Identities=14% Similarity=0.079 Sum_probs=40.9
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHhccCCCChh-hHHHHHHHHHhcCCHHHHHHHHHHHHhhC
Q 015370 305 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSR-NYICILSSYLMLGHLKEVGEIIDQWKQSA 364 (408)
Q Consensus 305 li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~-~~~~li~~~~~~g~~~~A~~~~~~~~~~~ 364 (408)
....+...|++++|.+.|++..+.... +.. .+..+..+|...|++++|...|++..+..
T Consensus 6 ~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 65 (99)
T 2kc7_A 6 TIKELINQGDIENALQALEEFLQTEPV-GKDEAYYLMGNAYRKLGDWQKALNNYQSAIELN 65 (99)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHCSS-THHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Confidence 344566777888888888777665322 344 66667777777888888888888877754
No 216
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=96.86 E-value=0.028 Score=49.32 Aligned_cols=73 Identities=16% Similarity=0.054 Sum_probs=51.5
Q ss_pred cCccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCCHHHH
Q 015370 296 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 373 (408)
Q Consensus 296 ~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~ 373 (408)
+.+..+|..+...+...|++++|...+++....+ |+...|..+...+.-.|++++|.+.+++.... .|...+|
T Consensus 274 ~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln--~s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL---~P~~~t~ 346 (372)
T 3ly7_A 274 NNLSIIYQIKAVSALVKGKTDESYQAINTGIDLE--MSWLNYVLLGKVYEMKGMNREAADAYLTAFNL---RPGANTL 346 (372)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---SCSHHHH
T ss_pred CcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc---CCCcChH
Confidence 3455666666666666788888888888777764 66666666777777788888888888877764 3555554
No 217
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=96.82 E-value=0.0039 Score=43.32 Aligned_cols=57 Identities=16% Similarity=0.084 Sum_probs=35.2
Q ss_pred HHHHHcCCCHHHHHHHHHHHHhCCCCCChh-hHHHHHHHHHhcCCHHHHHHHHHHHHhC
Q 015370 164 LHLYAGAKWTEKAEELFERVKQSNLSFNAL-MYNEMMTLYMSVGQVEKVALVVEEIKRK 221 (408)
Q Consensus 164 l~~~~~~~~~~~A~~~~~~m~~~~~~p~~~-~~~~li~~~~~~g~~~~a~~~~~~m~~~ 221 (408)
...+.+.|++++|.+.|++..+.. +.+.. .|..+..+|...|++++|...|++..+.
T Consensus 7 a~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~ 64 (99)
T 2kc7_A 7 IKELINQGDIENALQALEEFLQTE-PVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIEL 64 (99)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHC-SSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHC-CCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 344556666666666666666543 23445 6666666666666666666666666654
No 218
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=96.82 E-value=0.083 Score=38.51 Aligned_cols=67 Identities=15% Similarity=0.126 Sum_probs=39.9
Q ss_pred ChhhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhcCC
Q 015370 333 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 401 (408)
Q Consensus 333 ~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~ 401 (408)
+...+...++.+...|+-++-.+++.++... .+|+....-.+..+|.+.|+..+|.+++.+.-+.|+
T Consensus 90 ~se~vd~ALd~lv~~~KkDqLdki~~~~l~n--~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~kG~ 156 (172)
T 1wy6_A 90 LNEHVNKALDILVIQGKRDKLEEIGREILKN--NEVSASILVAIANALRRVGDERDATTLLIEACKKGE 156 (172)
T ss_dssp CCHHHHHHHHHHHHTTCHHHHHHHHHHHC----CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHhccHhHHHHHHHHHhcc--CCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHhhh
Confidence 3444555566666666666666666664332 245555566666666666666666666666666664
No 219
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=96.70 E-value=0.014 Score=44.09 Aligned_cols=82 Identities=9% Similarity=-0.082 Sum_probs=53.4
Q ss_pred hhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcC---CHHHHHHHHHHHHhccCCC--ChhhHHHHHHHHHhcCCHHHH
Q 015370 279 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG---NKDKIDQIWKSLRMTKQKM--TSRNYICILSSYLMLGHLKEV 353 (408)
Q Consensus 279 ~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~---~~~~a~~~~~~m~~~~~~p--~~~~~~~li~~~~~~g~~~~A 353 (408)
...+.+ .+.+....+. ++..+...+..++++.+ +.+++..+++...+.. .| ....+-.+.-+|.+.|++++|
T Consensus 14 l~~~~~-~y~~e~~~~~-~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~-~p~~~rd~lY~LAv~~~kl~~Y~~A 90 (152)
T 1pc2_A 14 LLKFEK-KFQSEKAAGS-VSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKG-SKEEQRDYVFYLAVGNYRLKEYEKA 90 (152)
T ss_dssp HHHHHH-HHHHHHHTTC-CCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHS-CHHHHHHHHHHHHHHHHHTSCHHHH
T ss_pred HHHHHH-HHHHHHccCC-CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC-CccchHHHHHHHHHHHHHccCHHHH
Confidence 444555 4444444333 46666667777777777 5668888888777764 24 233444566667888888888
Q ss_pred HHHHHHHHhh
Q 015370 354 GEIIDQWKQS 363 (408)
Q Consensus 354 ~~~~~~~~~~ 363 (408)
.++++.+.+.
T Consensus 91 ~~y~~~lL~i 100 (152)
T 1pc2_A 91 LKYVRGLLQT 100 (152)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 8888888774
No 220
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.69 E-value=0.17 Score=50.03 Aligned_cols=45 Identities=4% Similarity=-0.064 Sum_probs=23.3
Q ss_pred HcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHH
Q 015370 168 AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 218 (408)
Q Consensus 168 ~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m 218 (408)
...|++++|.++.+.+ .+...|..+...+.+.|+++.|.+.|..+
T Consensus 663 l~~~~~~~A~~~~~~~------~~~~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 663 LKVGQLTLARDLLTDE------SAEMKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHHTCHHHHHHHHTTC------CCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhcCCHHHHHHHHHhh------CcHhHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 3445555555553222 13455555555555555555555555554
No 221
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=96.38 E-value=0.17 Score=36.87 Aligned_cols=120 Identities=12% Similarity=0.059 Sum_probs=65.4
Q ss_pred hcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHHHHhcCCCC-------------------CCCHHHH
Q 015370 100 KSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLS-------------------AKTSETY 160 (408)
Q Consensus 100 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~-------------------~~~~~~~ 160 (408)
-.|.+++..++..+..... +..-||..|.-....-+-+...++++.+-.. +.+....
T Consensus 19 ldG~v~qGveii~k~~~ss----ni~E~NW~ICNiiD~a~C~y~v~vLd~IGkiFDis~C~NlKrVi~C~~~~n~~se~v 94 (172)
T 1wy6_A 19 LDGYIDEGVKIVLEITKSS----TKSEYNWFICNLLESIDCRYMFQVLDKIGSYFDLDKCQNLKSVVECGVINNTLNEHV 94 (172)
T ss_dssp HTTCHHHHHHHHHHHHHHS----CHHHHTHHHHHHHHHCCHHHHHHHHHHHGGGSCGGGCSCTHHHHHHHHHTTCCCHHH
T ss_pred HhhhHHHHHHHHHHHcCCC----CccccceeeeecchhhchhHHHHHHHHHhhhcCcHhhhcHHHHHHHHHHhcchHHHH
Confidence 3466777777777766542 3445555554444444444444444433221 1244445
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCC
Q 015370 161 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVV 224 (408)
Q Consensus 161 ~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~ 224 (408)
+..++.+...|.-|+-.+++.++... .+|++...-.+..+|.+.|+..+|.+++.+..+.|++
T Consensus 95 d~ALd~lv~~~KkDqLdki~~~~l~n-~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~kG~k 157 (172)
T 1wy6_A 95 NKALDILVIQGKRDKLEEIGREILKN-NEVSASILVAIANALRRVGDERDATTLLIEACKKGEK 157 (172)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHC---CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHhccHhHHHHHHHHHhcc-CCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHhhhH
Confidence 55556666666666666666664332 2455566666666666666666666666666666553
No 222
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.22 E-value=0.045 Score=37.56 Aligned_cols=65 Identities=11% Similarity=-0.028 Sum_probs=32.8
Q ss_pred CHHHHHHHHHHHHcCCC---HHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhC
Q 015370 156 TSETYTALLHLYAGAKW---TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 221 (408)
Q Consensus 156 ~~~~~~~ll~~~~~~~~---~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~ 221 (408)
|...+..+..++...++ .++|..++++.+..+ +-++.+...+...+.+.|++++|...|+.+.+.
T Consensus 5 ~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~d-p~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~ 72 (93)
T 3bee_A 5 TATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLE-PYNEAALSLIANDHFISFRFQEAIDTWVLLLDS 72 (93)
T ss_dssp CHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHC-cCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 44444444444433322 455555555555543 334445555555555555555555555555543
No 223
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=96.18 E-value=0.031 Score=39.35 Aligned_cols=65 Identities=5% Similarity=-0.205 Sum_probs=49.1
Q ss_pred chHHHHHHHHHhcCCHHHHHHHHHHHHhcc------CCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhhC
Q 015370 300 ITYDFLIILYAGLGNKDKIDQIWKSLRMTK------QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364 (408)
Q Consensus 300 ~~~~~li~~~~~~~~~~~a~~~~~~m~~~~------~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~ 364 (408)
.-+..|...+...|+++.|...|+...+.- -.+....+..+..++.+.|++++|..++++..+..
T Consensus 6 ~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~ 76 (104)
T 2v5f_A 6 EDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELD 76 (104)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcC
Confidence 345577888888999999999888765532 12244567788888899999999999999888753
No 224
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.07 E-value=0.13 Score=35.22 Aligned_cols=67 Identities=9% Similarity=0.045 Sum_probs=51.0
Q ss_pred CCChhhHHHHHHHHHhcCC---HHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhcC
Q 015370 189 SFNALMYNEMMTLYMSVGQ---VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCD 256 (408)
Q Consensus 189 ~p~~~~~~~li~~~~~~g~---~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~ 256 (408)
+.|+..+..+..++...++ .++|..++++..+.... +......+...+.+.|++++|+..|+.+.+.
T Consensus 3 p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~-~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~ 72 (93)
T 3bee_A 3 AVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPY-NEAALSLIANDHFISFRFQEAIDTWVLLLDS 72 (93)
T ss_dssp CCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 4567777777777765544 68888888888875433 5677777778888889999999999888874
No 225
>3lvg_A Clathrin heavy chain 1; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} PDB: 3lvh_A
Probab=95.88 E-value=2.9e-06 Score=75.75 Aligned_cols=264 Identities=11% Similarity=0.042 Sum_probs=163.4
Q ss_pred ChhhHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHHHHhcCCCCCCCHHHHHHHHHH
Q 015370 87 TVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHL 166 (408)
Q Consensus 87 ~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~ll~~ 166 (408)
.+..|..|.++....+++.+|++-|-+ .-|+..|..+|.+..+.|.+++-.+++...++...+...=+.|+-+
T Consensus 53 ~p~VWs~LgkAqL~~~~v~eAIdsyIk-------A~Dps~y~eVi~~A~~~~~~edLv~yL~MaRk~~ke~~IDteLi~a 125 (624)
T 3lvg_A 53 EPAVWSQLAKAQLQKGMVKEAIDSYIK-------ADDPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFA 125 (624)
T ss_dssp CCCCSSSHHHHTTTSSSCTTTTTSSCC-------CSCCCSSSHHHHHTTTSSCCTTHHHHHHTTSTTCCSTTTTHHHHHH
T ss_pred CccHHHHHHHHHHccCchHHHHHHHHh-------CCChHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccHHHHHHH
Confidence 445566777777777777666654422 2245667777777777777777777777666655555555677777
Q ss_pred HHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHH
Q 015370 167 YAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 246 (408)
Q Consensus 167 ~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a 246 (408)
|++.+++.+-++++ -.||..-...+.+-|...|.++.|.-+|..+.. |.-|...+.+.|++..|
T Consensus 126 yAk~~rL~elEefl-------~~~N~A~iq~VGDrcf~e~lYeAAKilys~isN---------~akLAstLV~L~~yq~A 189 (624)
T 3lvg_A 126 LAKTNRLAELEEFI-------NGPNNAHIQQVGDRCYDEKMYDAAKLLYNNVSN---------FGRLASTLVHLGEYQAA 189 (624)
T ss_dssp HHTSCSSSTTTSTT-------SCCSSSCTHHHHHHHHHSCCSTTSSTTGGGSCC---------CTTTSSSSSSCSGGGSS
T ss_pred HHhhCcHHHHHHHH-------cCCCcccHHHHHHHHHHccCHHHHHHHHHhCcc---------HHHHHHHHHHHHHHHHH
Confidence 77777765543332 125666666677777777777777666643322 22334445566777666
Q ss_pred HHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCHHHHHHHHHHHH
Q 015370 247 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 326 (408)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~ 326 (408)
.+.-+ -.-++.||-.+-.+|...+.+..|.-.-+.-+ ..++ -...++..|-..|.+++.+.+++.-.
T Consensus 190 VdaAr-------KAns~ktWKeV~~ACvd~~EfrLAqicGLniI----vhad--eL~elv~~YE~~G~f~ELIsLlEagl 256 (624)
T 3lvg_A 190 VDGAR-------KANSTRTWKEVCFACVDGKEFRLAQMCGLHIV----VHAD--ELEELINYYQDRGYFEELITMLEAAL 256 (624)
T ss_dssp TTTTT-------TCCSSCSHHHHTHHHHHSCTTTTTTHHHHHHH----CCSS--CCSGGGSSSSTTCCCTTSTTTHHHHT
T ss_pred HHHHH-------hcCChhHHHHHHHHHhCchHHHHHHHhcchhc----ccHH--HHHHHHHHHHhCCCHHHHHHHHHHHh
Confidence 44322 22456678888888888888888776222221 1122 22245666788899988888887544
Q ss_pred hccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHH
Q 015370 327 MTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 395 (408)
Q Consensus 327 ~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~ 395 (408)
... +.-...|+.|.-.|++- +.++.++-++..-. +.|+ -.+|++|.+...|.++.-++..
T Consensus 257 glE-rAHmGmFTELaILYsKY-~PeKlmEHlklf~s----riNi---pKviracE~ahLW~ElvfLY~~ 316 (624)
T 3lvg_A 257 GLE-RAHMGMFTELAILYSKF-KPQKMREHLELFWS----RVNI---PKVLRAAEQAHLWAELVFLYDK 316 (624)
T ss_dssp TST-TCCHHHHHHHHHHHHSS-CTTHHHHHHTTSSS----SSCC---TTTHHHHTTTTCHHHHHHHHHH
T ss_pred CCC-chhHHHHHHHHHHHHhc-CHHHHHHHHHHHHH----hccH---HHHHHHHHHHhhHHHHHHHHhc
Confidence 221 33455677788888764 45554444443221 2232 2478999999999998887764
No 226
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=95.86 E-value=0.44 Score=36.81 Aligned_cols=102 Identities=13% Similarity=0.164 Sum_probs=47.3
Q ss_pred HHHhhcChHHHHHHHhcCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHH
Q 015370 133 LMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVA 212 (408)
Q Consensus 133 ~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~ 212 (408)
.....|+++.|.++.+++ .+...|..|.......|+++-|++.|.+..+ +..+.-.|.-.|+.++..
T Consensus 14 LAL~lg~l~~A~e~a~~l----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D---------~~~L~~Ly~~tg~~e~L~ 80 (177)
T 3mkq_B 14 LALEYGNLDAALDEAKKL----NDSITWERLIQEALAQGNASLAEMIYQTQHS---------FDKLSFLYLVTGDVNKLS 80 (177)
T ss_dssp HHHHTTCHHHHHHHHHHH----CCHHHHHHHHHHHHHTTCHHHHHHHHHHTTC---------HHHHHHHHHHHTCHHHHH
T ss_pred HHHhcCCHHHHHHHHHHh----CCHHHHHHHHHHHHHcCChHHHHHHHHHhCC---------HHHHHHHHHHhCCHHHHH
Confidence 334455555555554444 2445555555555555555555555554432 223333344445544444
Q ss_pred HHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 015370 213 LVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253 (408)
Q Consensus 213 ~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~ 253 (408)
++-+.....|- ++.....+...|+++++.++|.+.
T Consensus 81 kla~iA~~~g~------~n~af~~~l~lGdv~~~i~lL~~~ 115 (177)
T 3mkq_B 81 KMQNIAQTRED------FGSMLLNTFYNNSTKERSSIFAEG 115 (177)
T ss_dssp HHHHHHHHTTC------HHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred HHHHHHHHCcc------HHHHHHHHHHcCCHHHHHHHHHHC
Confidence 44443333321 122223333445555555555443
No 227
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=95.82 E-value=0.46 Score=36.72 Aligned_cols=98 Identities=10% Similarity=0.138 Sum_probs=51.8
Q ss_pred HhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhh
Q 015370 203 MSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 282 (408)
Q Consensus 203 ~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a 282 (408)
...|+++.|.++.+++ -+...|..+.+.....|+++-|++.|.+..+ +..+.-.|.-.|+.+.-
T Consensus 16 L~lg~l~~A~e~a~~l------~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D----------~~~L~~Ly~~tg~~e~L 79 (177)
T 3mkq_B 16 LEYGNLDAALDEAKKL------NDSITWERLIQEALAQGNASLAEMIYQTQHS----------FDKLSFLYLVTGDVNKL 79 (177)
T ss_dssp HHTTCHHHHHHHHHHH------CCHHHHHHHHHHHHHTTCHHHHHHHHHHTTC----------HHHHHHHHHHHTCHHHH
T ss_pred HhcCCHHHHHHHHHHh------CCHHHHHHHHHHHHHcCChHHHHHHHHHhCC----------HHHHHHHHHHhCCHHHH
Confidence 4556666666665544 2455666666666666666666666666554 33455555555555554
Q ss_pred HHHHHHHHHHhcccCccchHHHHHHHHHhcCCHHHHHHHHH
Q 015370 283 ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 323 (408)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~ 323 (408)
.+ +.+.....+ -++.....+.-.|+++++.++|.
T Consensus 80 ~k-la~iA~~~g------~~n~af~~~l~lGdv~~~i~lL~ 113 (177)
T 3mkq_B 80 SK-MQNIAQTRE------DFGSMLLNTFYNNSTKERSSIFA 113 (177)
T ss_dssp HH-HHHHHHHTT------CHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HH-HHHHHHHCc------cHHHHHHHHHHcCCHHHHHHHHH
Confidence 44 222222221 22333344445566666666654
No 228
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=95.75 E-value=0.055 Score=39.23 Aligned_cols=66 Identities=8% Similarity=-0.129 Sum_probs=32.3
Q ss_pred CccchHHHHHHHHHhcCCHHH---HHHHHHHHHhccCCC--ChhhHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q 015370 297 RQWITYDFLIILYAGLGNKDK---IDQIWKSLRMTKQKM--TSRNYICILSSYLMLGHLKEVGEIIDQWKQS 363 (408)
Q Consensus 297 ~~~~~~~~li~~~~~~~~~~~---a~~~~~~m~~~~~~p--~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~ 363 (408)
++..+-..+..++.+..+... ++.+++.+...+ .| .....-.|.-++.+.|++++|.+.++.+.+.
T Consensus 33 ~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~-~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~ 103 (126)
T 1nzn_A 33 VSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKG-SKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQT 103 (126)
T ss_dssp CCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTS-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC-CcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 344444445555555554433 555555554442 12 1122223444556666666666666666553
No 229
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=95.49 E-value=0.16 Score=35.49 Aligned_cols=27 Identities=4% Similarity=-0.004 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHh
Q 015370 228 FTYNLWISSCAATLNIDQVKKFLDEMS 254 (408)
Q Consensus 228 ~~~~~ll~~~~~~g~~~~a~~~~~~~~ 254 (408)
..+..+..++.+.|+++.|..+++++.
T Consensus 47 ~i~~~L~~~~~~~g~~~~A~~~~~~al 73 (104)
T 2v5f_A 47 SVLDYLSYAVYQQGDLDKALLLTKKLL 73 (104)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 334444444444444444444444443
No 230
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=95.18 E-value=1.8 Score=39.37 Aligned_cols=183 Identities=11% Similarity=0.073 Sum_probs=89.9
Q ss_pred CCHHHHHHHHHHHHh-----CCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhC-CCCCCHHHHHHHHHHHH----hc
Q 015370 171 KWTEKAEELFERVKQ-----SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK-NVVPDIFTYNLWISSCA----AT 240 (408)
Q Consensus 171 ~~~~~A~~~~~~m~~-----~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~-g~~p~~~~~~~ll~~~~----~~ 240 (408)
|++++|++.+-.+.+ .+..........++..|...|+++...+.+..+... |..+. ....+++.+. ..
T Consensus 30 ~~~~~a~e~ll~lEK~~r~~~d~~s~~r~l~~iv~l~~~~~~~~~l~e~i~~Lskkr~qlk~--ai~~~V~~~~~~l~~~ 107 (445)
T 4b4t_P 30 NDCNSALDQLLVLEKKTRQASDLASSKEVLAKIVDLLASRNKWDDLNEQLTLLSKKHGQLKL--SIQYMIQKVMEYLKSS 107 (445)
T ss_dssp HHHHHHHHHHHHHHHHHSSSCSTTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHTTTTTSHH--HHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhhhhHH--HHHHHHHHHHHHHhcC
Confidence 677888777765553 233445566777888888888888887777666543 32222 2233333322 22
Q ss_pred CCHHH--HHHHHHHHhcCCCCCCCH--------HHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCc-----cchHHHH
Q 015370 241 LNIDQ--VKKFLDEMSCDSGGSDDW--------VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQ-----WITYDFL 305 (408)
Q Consensus 241 g~~~~--a~~~~~~~~~~~~~~~~~--------~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~-----~~~~~~l 305 (408)
...+. -..+.+... .+.... .....|...|...|++.+|.. ++..+.......+ +..+...
T Consensus 108 ~~~d~~~~~~~i~~l~---~vte~kiflE~erarl~~~La~i~e~~g~~~eA~~-iL~~l~~Et~~~~~~~~kve~~l~q 183 (445)
T 4b4t_P 108 KSLDLNTRISVIETIR---VVTENKIFVEVERARVTKDLVEIKKEEGKIDEAAD-ILCELQVETYGSMEMSEKIQFILEQ 183 (445)
T ss_dssp CTTHHHHHHHHHHCCS---SSSSCCCCCCHHHHHHHHHHHHHHHHHTCHHHHHH-HHHHHHHHHCSSSCHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHH---HHhccchHHHHHHHHHHHHHHHHHHHccCHHHHHH-HHHHHHHHHHhcccHHHHHHHHHHH
Confidence 22221 111221111 122211 012345566666666666666 5555544322221 1344445
Q ss_pred HHHHHhcCCHHHHHHHHHHHHhc--cCCCCh----hhHHHHHHHHHhcCCHHHHHHHHHH
Q 015370 306 IILYAGLGNKDKIDQIWKSLRMT--KQKMTS----RNYICILSSYLMLGHLKEVGEIIDQ 359 (408)
Q Consensus 306 i~~~~~~~~~~~a~~~~~~m~~~--~~~p~~----~~~~~li~~~~~~g~~~~A~~~~~~ 359 (408)
+..|...+++.+|..++.+.... ...+++ ..|...+..+...+++.+|...|.+
T Consensus 184 ~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e 243 (445)
T 4b4t_P 184 MELSILKGDYSQATVLSRKILKKTFKNPKYESLKLEYYNLLVKISLHKREYLEVAQYLQE 243 (445)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 55566666666666666654321 111111 1234455555555666665555444
No 231
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=95.15 E-value=1.3 Score=44.02 Aligned_cols=258 Identities=10% Similarity=0.010 Sum_probs=142.0
Q ss_pred HHHhhcChHHHHHHHhcCCCC--CCC--HHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCC-------CCChhhHHHHHHH
Q 015370 133 LMTKVFGIHSGERYFEGLPLS--AKT--SETYTALLHLYAGAKWTEKAEELFERVKQSNL-------SFNALMYNEMMTL 201 (408)
Q Consensus 133 ~~~~~g~~~~a~~~~~~~~~~--~~~--~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~-------~p~~~~~~~li~~ 201 (408)
+....|+.++++.+++..... ..+ ...-..+.-+.+.+|..+++..++.......- .+....-.++.-+
T Consensus 383 GlIh~g~~~~gl~~L~~yL~~~~s~~~~ik~GAllaLGli~ag~~~~~~~lL~~~L~~~~~~~~~~~~~~ir~gAaLGLG 462 (963)
T 4ady_A 383 GVIHKGNLLEGKKVMAPYLPGSRASSRFIKGGSLYGLGLIYAGFGRDTTDYLKNIIVENSGTSGDEDVDVLLHGASLGIG 462 (963)
T ss_dssp HHHTSSCTTTHHHHHTTTSTTSCCSCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHHHSSCCSCHHHHHHHHHHHHHHH
T ss_pred hhhccCchHHHHHHHHHhccccCCCcHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHcCccccccccccHHHHHHHHHHHH
Confidence 345677888888888886642 122 33444555666677776778887777654321 0112222333333
Q ss_pred HHhcCC-HHHHHHHHHHHHhCCCCCCHHHHH--HHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCc
Q 015370 202 YMSVGQ-VEKVALVVEEIKRKNVVPDIFTYN--LWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278 (408)
Q Consensus 202 ~~~~g~-~~~a~~~~~~m~~~g~~p~~~~~~--~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~ 278 (408)
.+-.|. -+++.+.+..+....- +...... ++...+...|+.+....++..+.+. ...++.-...+.-++.-.|+
T Consensus 463 la~~GS~~eev~e~L~~~L~dd~-~~~~~~AalALGli~vGTgn~~ai~~LL~~~~e~--~~e~vrR~aalgLGll~~g~ 539 (963)
T 4ady_A 463 LAAMGSANIEVYEALKEVLYNDS-ATSGEAAALGMGLCMLGTGKPEAIHDMFTYSQET--QHGNITRGLAVGLALINYGR 539 (963)
T ss_dssp HHSTTCCCHHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHC--SCHHHHHHHHHHHHHHTTTC
T ss_pred HHhcCCCCHHHHHHHHHHHhcCC-HHHHHHHHHHHhhhhcccCCHHHHHHHHHHHhcc--CcHHHHHHHHHHHHhhhCCC
Confidence 333332 2455555555554311 1111122 2333455678888888888877663 22233333444445557788
Q ss_pred hhhhHHHHHHHHHHhcccCccchH--HHHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHH
Q 015370 279 LVNAESSTLVEAEKSITQRQWITY--DFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 356 (408)
Q Consensus 279 ~~~a~~~~~~~~~~~~~~~~~~~~--~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~ 356 (408)
.+.+.. +++.+... ..|....- .++..+|+..|+.....+++..+.... ..+......+.-++...|+.+.+.++
T Consensus 540 ~e~~~~-li~~L~~~-~dp~vRygaa~alglAyaGTGn~~aIq~LL~~~~~d~-~d~VRraAViaLGlI~~g~~e~v~rl 616 (963)
T 4ady_A 540 QELADD-LITKMLAS-DESLLRYGGAFTIALAYAGTGNNSAVKRLLHVAVSDS-NDDVRRAAVIALGFVLLRDYTTVPRI 616 (963)
T ss_dssp GGGGHH-HHHHHHHC-SCHHHHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHCS-CHHHHHHHHHHHHHHTSSSCSSHHHH
T ss_pred hHHHHH-HHHHHHhC-CCHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhccCC-cHHHHHHHHHHHHhhccCCHHHHHHH
Confidence 888887 66665542 22222221 234556778899888888988877642 22333333344445556777777777
Q ss_pred HHHHHhhCCCCCCHHHHHHHHHHHHhcCCh-HHHHHHHHHHHh
Q 015370 357 IDQWKQSATSDFDISACNRLLGAFSDVGLT-EKANEFHMLLLQ 398 (408)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~li~~~~~~g~~-~~a~~~~~~m~~ 398 (408)
++.+.+.+ .|.+..-..+..|....|.. .++.+++..+..
T Consensus 617 v~~L~~~~--d~~VR~gAalALGli~aGn~~~~aid~L~~L~~ 657 (963)
T 4ady_A 617 VQLLSKSH--NAHVRCGTAFALGIACAGKGLQSAIDVLDPLTK 657 (963)
T ss_dssp TTTGGGCS--CHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHT
T ss_pred HHHHHhcC--CHHHHHHHHHHHHHhccCCCcHHHHHHHHHHcc
Confidence 77666543 45555555555555555554 466777777653
No 232
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=95.08 E-value=0.37 Score=36.23 Aligned_cols=83 Identities=13% Similarity=0.001 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcC---chhhhHHHHHHHHHHhc-ccCccchHHHHHHHHHhcCCHHHH
Q 015370 243 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS---HLVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKI 318 (408)
Q Consensus 243 ~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~---~~~~a~~~~~~~~~~~~-~~~~~~~~~~li~~~~~~~~~~~a 318 (408)
...+.+-|.+.... + +++..+.-.+.-++++++ +.+++.. +++...+.. +..+...+-.|.-+|.+.|++++|
T Consensus 14 l~~~~~~y~~e~~~-~-~~~~~~~F~ya~~Lv~S~~~~~~~~gI~-lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A 90 (152)
T 1pc2_A 14 LLKFEKKFQSEKAA-G-SVSKSTQFEYAWCLVRSKYNDDIRKGIV-LLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKA 90 (152)
T ss_dssp HHHHHHHHHHHHHT-T-CCCHHHHHHHHHHHHTCSSHHHHHHHHH-HHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHH
T ss_pred HHHHHHHHHHHHcc-C-CCcHHHHHHHHHHHHcCCCHHHHHHHHH-HHHHHHhcCCccchHHHHHHHHHHHHHccCHHHH
Confidence 44555555555542 2 367777777777788877 6668888 777777765 312345555677778888888888
Q ss_pred HHHHHHHHhc
Q 015370 319 DQIWKSLRMT 328 (408)
Q Consensus 319 ~~~~~~m~~~ 328 (408)
.+.++.+.+.
T Consensus 91 ~~y~~~lL~i 100 (152)
T 1pc2_A 91 LKYVRGLLQT 100 (152)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 8888888776
No 233
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=94.94 E-value=0.33 Score=36.21 Aligned_cols=102 Identities=10% Similarity=0.101 Sum_probs=55.3
Q ss_pred CCHHHHHHHHHHHHHcCch------hhhHHHHHHHHHHhcccCccchHHHHHHH------HHhcCCHHHHHHHHHHHHhc
Q 015370 261 DDWVKYVNLVNIYITASHL------VNAESSTLVEAEKSITQRQWITYDFLIIL------YAGLGNKDKIDQIWKSLRMT 328 (408)
Q Consensus 261 ~~~~~~~~li~~~~~~~~~------~~a~~~~~~~~~~~~~~~~~~~~~~li~~------~~~~~~~~~a~~~~~~m~~~ 328 (408)
-|..+|-..+...-+.|+. ++.++ ++++.....++.....|...|.. +...+++++|.++|+.+...
T Consensus 11 ~~yd~W~~yl~llE~~g~p~~d~~l~rlrd-~YerAia~~Pp~k~~~wrrYI~LWIrYA~~~ei~D~d~aR~vy~~a~~~ 89 (161)
T 4h7y_A 11 NNPEDWLSLLLKLEKNSVPLSDALLNKLIG-RYSQAIEALPPDKYGQNESFARIQVRFAELKAIQEPDDARDYFQMARAN 89 (161)
T ss_dssp CSHHHHHHHHHHHHHHTCSCCHHHHHHHHH-HHHHHHHHSCGGGGTTCHHHHHHHHHHHHHHHHHCGGGCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCchhhHHHHHHH-HHHHHHHcCCccccccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 4556666666666666776 66666 66666655443322333322222 12346677777777766554
Q ss_pred cCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhhC
Q 015370 329 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 364 (408)
Q Consensus 329 ~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~ 364 (408)
+-+- ...|.....-=.+.|++..|.+++.+.+..+
T Consensus 90 hKkF-AKiwi~~AqFEiRqgnl~kARkILg~AiG~~ 124 (161)
T 4h7y_A 90 CKKF-AFVHISFAQFELSQGNVKKSKQLLQKAVERG 124 (161)
T ss_dssp CTTB-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred hHHH-HHHHHHHHHHHHHcccHHHHHHHHHHHhccC
Confidence 2222 3333333333446677777777777766644
No 234
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=94.78 E-value=1.6 Score=36.77 Aligned_cols=125 Identities=11% Similarity=-0.027 Sum_probs=84.2
Q ss_pred cChHHHHHHHhcCCCCCCCHHHHHHHHH-HHHcC--CC------HHHHHHHHHHHHhCCCCCC---hhhHHHHHHHHHhc
Q 015370 138 FGIHSGERYFEGLPLSAKTSETYTALLH-LYAGA--KW------TEKAEELFERVKQSNLSFN---ALMYNEMMTLYMSV 205 (408)
Q Consensus 138 g~~~~a~~~~~~~~~~~~~~~~~~~ll~-~~~~~--~~------~~~A~~~~~~m~~~~~~p~---~~~~~~li~~~~~~ 205 (408)
++..+..+.+.+.....+....|..++. .++.. |. ...|...+++..+.+ |+ ...|..+...|.+.
T Consensus 135 ~~~~~~~~~l~~~~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLD--P~~~~GsA~~~LG~lY~~v 212 (301)
T 3u64_A 135 GDEQRLHKVLSRCTRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLW--PSYQEGAVWNVLTKFYAAA 212 (301)
T ss_dssp SCHHHHHHHHTTCCGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHC--TTHHHHHHHHHHHHHHHHS
T ss_pred cchhhHHHHHHHcCccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhC--CCcccCHHHHHHHHHHHhC
Confidence 3444455556566543344566766664 33332 33 567777788887764 44 56888999999884
Q ss_pred -----CCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhc-CCHHHHHHHHHHHhcCCCCC--CCHHH
Q 015370 206 -----GQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT-LNIDQVKKFLDEMSCDSGGS--DDWVK 265 (408)
Q Consensus 206 -----g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~-g~~~~a~~~~~~~~~~~~~~--~~~~~ 265 (408)
|+.++|.+.|++..+.+..-+..++......++.. |+.+++.+.+++.... ... |+...
T Consensus 213 Pp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a-~p~~~P~~~l 279 (301)
T 3u64_A 213 PESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRAGFDEALDRALAI-DPESVPHNKL 279 (301)
T ss_dssp CTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHC-CGGGCSSCHH
T ss_pred CCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcC-CCCCCCChhH
Confidence 89999999999998854322356666677888774 8999999999998873 333 55443
No 235
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=94.64 E-value=2.5 Score=38.41 Aligned_cols=255 Identities=13% Similarity=0.052 Sum_probs=150.7
Q ss_pred hcChHHHHHHHhcCCCC-------CCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhC-CCCCChhhHHHHHHHH----Hh
Q 015370 137 VFGIHSGERYFEGLPLS-------AKTSETYTALLHLYAGAKWTEKAEELFERVKQS-NLSFNALMYNEMMTLY----MS 204 (408)
Q Consensus 137 ~g~~~~a~~~~~~~~~~-------~~~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~-~~~p~~~~~~~li~~~----~~ 204 (408)
.|+++.|++.+-.+.+. ..+......++..|.+.|+++...+.+..+... |..+ .....++..+ ..
T Consensus 29 ~~~~~~a~e~ll~lEK~~r~~~d~~s~~r~l~~iv~l~~~~~~~~~l~e~i~~Lskkr~qlk--~ai~~~V~~~~~~l~~ 106 (445)
T 4b4t_P 29 QNDCNSALDQLLVLEKKTRQASDLASSKEVLAKIVDLLASRNKWDDLNEQLTLLSKKHGQLK--LSIQYMIQKVMEYLKS 106 (445)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSCSTTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHTTTTTSH--HHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhhhhH--HHHHHHHHHHHHHHhc
Confidence 37788888766443321 235777888999999999999998888776643 4332 2333444433 23
Q ss_pred cCCHHHH--HHHHHHHH--hCC-CCC---CHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCH----HHHHHHHHH
Q 015370 205 VGQVEKV--ALVVEEIK--RKN-VVP---DIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW----VKYVNLVNI 272 (408)
Q Consensus 205 ~g~~~~a--~~~~~~m~--~~g-~~p---~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~----~~~~~li~~ 272 (408)
....+.. ..+.+... ..| +-. .......|...+...|++.+|..++..+.....-..+. ..+..-+..
T Consensus 107 ~~~~d~~~~~~~i~~l~~vte~kiflE~erarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl 186 (445)
T 4b4t_P 107 SKSLDLNTRISVIETIRVVTENKIFVEVERARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMEL 186 (445)
T ss_dssp HCTTHHHHHHHHHHCCSSSSSCCCCCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 3333322 22222111 111 111 12334567788899999999999999987532222222 457778889
Q ss_pred HHHcCchhhhHHHHHHHHHHh----cccCc--cchHHHHHHHHHhcCCHHHHHHHHHHHHhc-cCCCChhhHH----HHH
Q 015370 273 YITASHLVNAESSTLVEAEKS----ITQRQ--WITYDFLIILYAGLGNKDKIDQIWKSLRMT-KQKMTSRNYI----CIL 341 (408)
Q Consensus 273 ~~~~~~~~~a~~~~~~~~~~~----~~~~~--~~~~~~li~~~~~~~~~~~a~~~~~~m~~~-~~~p~~~~~~----~li 341 (408)
|...+++..|.. ++.++... ...|+ ...+...+..+...+++.+|-..|.+.... ...-+...+. .++
T Consensus 187 ~l~~~d~~~a~~-~~~ki~~~~~~~~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~~~~~~d~~~~~~~L~~~v 265 (445)
T 4b4t_P 187 SILKGDYSQATV-LSRKILKKTFKNPKYESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQTDAIKSDEAKWKPVLSHIV 265 (445)
T ss_dssp HHHHTCHHHHHH-HHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred HHHCCCHHHHHH-HHHHHHHhhcccCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcccccCCHHHHHHHHHHHH
Confidence 999999999999 77776432 22222 235566777788889999998887765432 1111222222 233
Q ss_pred HHHHhcCCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHhc--CChHHHHHHHHH
Q 015370 342 SSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDV--GLTEKANEFHML 395 (408)
Q Consensus 342 ~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~li~~~~~~--g~~~~a~~~~~~ 395 (408)
.+..-.+....--.++....... .-++...|..++.+|... .+++.+.+.|..
T Consensus 266 ~~~iLa~~~~~~~~ll~~~~~~~-~~~~l~~~~~L~k~f~~~~L~~~~~~~~~~~~ 320 (445)
T 4b4t_P 266 YFLVLSPYGNLQNDLIHKIQNDN-NLKKLESQESLVKLFTTNELMRWPIVQKTYEP 320 (445)
T ss_dssp HHHHHSSCSSTTHHHHHSHHHHS-SCHHHHHHHHHHHHHHHCCSSSHHHHHHHTCS
T ss_pred HHHHhCCCCchHHHHHHHHhhcc-cccccHHHHHHHHHHHhchHhhhHHHHHHHHH
Confidence 33334444444455555554443 235667788888888774 345555554443
No 236
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=93.94 E-value=1.4 Score=32.84 Aligned_cols=103 Identities=8% Similarity=-0.097 Sum_probs=67.2
Q ss_pred CHHHHHHHHHHHHhcCCH------HHHHHHHHHHhcCCCCCCCHHH-HHHHHHH------HHHcCchhhhHHHHHHHHHH
Q 015370 226 DIFTYNLWISSCAATLNI------DQVKKFLDEMSCDSGGSDDWVK-YVNLVNI------YITASHLVNAESSTLVEAEK 292 (408)
Q Consensus 226 ~~~~~~~ll~~~~~~g~~------~~a~~~~~~~~~~~~~~~~~~~-~~~li~~------~~~~~~~~~a~~~~~~~~~~ 292 (408)
|..+|-..+...-+.|++ ++..++|++... .++|+... |...+.. +...++.++|.+ ++..+.+
T Consensus 12 ~yd~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia--~~Pp~k~~~wrrYI~LWIrYA~~~ei~D~d~aR~-vy~~a~~ 88 (161)
T 4h7y_A 12 NPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIE--ALPPDKYGQNESFARIQVRFAELKAIQEPDDARD-YFQMARA 88 (161)
T ss_dssp SHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHH--HSCGGGGTTCHHHHHHHHHHHHHHHHHCGGGCHH-HHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHH--cCCccccccHHHHHHHHHHHHHHHHhcCHHHHHH-HHHHHHH
Confidence 556777777777777888 888888888877 46665321 2222222 233477888888 8887766
Q ss_pred hcccCccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCC
Q 015370 293 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 332 (408)
Q Consensus 293 ~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p 332 (408)
.... =...|-.....-.+.|++..|.+++.+....+.+|
T Consensus 89 ~hKk-FAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~ 127 (161)
T 4h7y_A 89 NCKK-FAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVP 127 (161)
T ss_dssp HCTT-BHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBC
T ss_pred HhHH-HHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCc
Confidence 5222 24455555555567888888888888777766554
No 237
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=93.60 E-value=0.41 Score=46.43 Aligned_cols=52 Identities=8% Similarity=-0.076 Sum_probs=32.0
Q ss_pred HHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCHHHHHHHHHHH
Q 015370 272 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 325 (408)
Q Consensus 272 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m 325 (408)
.+...|+++.|+. +.++.....+. +..+|..|..+|...|+++.|+-.+..+
T Consensus 346 FLl~K~~~elAL~-~Ak~AV~~aPs-eF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 346 FLLNRGDYELALG-VSNTSTELALD-SFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHTTCHHHHHH-HHHHHHHHCSS-CHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHhccCcHHHHHH-HHHHHHhcCch-hhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 3455667777776 55554443322 5567777777777777777777666554
No 238
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=93.60 E-value=0.2 Score=44.84 Aligned_cols=60 Identities=7% Similarity=0.033 Sum_probs=37.1
Q ss_pred hHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHH
Q 015370 301 TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 361 (408)
Q Consensus 301 ~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~ 361 (408)
+...++..+...|+++++...+..+.... ..+...|..++.++.+.|+..+|++.|++..
T Consensus 173 a~~~~~~~~l~~g~~~~a~~~l~~~~~~~-P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r 232 (388)
T 2ff4_A 173 AHTAKAEAEIACGRASAVIAELEALTFEH-PYREPLWTQLITAYYLSDRQSDALGAYRRVK 232 (388)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 44455566666677777766666655443 2255566667777777777777777666654
No 239
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=93.50 E-value=4.8 Score=41.62 Aligned_cols=144 Identities=11% Similarity=0.064 Sum_probs=78.2
Q ss_pred HHHHHHHHhcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHHHHhcCCCC-CC---------------
Q 015370 92 RHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLS-AK--------------- 155 (408)
Q Consensus 92 ~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~-~~--------------- 155 (408)
..++..+.+.+..+.+.++..+. +.++..--.+..++...|++++|.+.|.+.... +.
T Consensus 816 ~~l~~~l~~~~~~~~~~~l~~~~------~~~~~~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~ 889 (1139)
T 4fhn_B 816 TELVEKLFLFKQYNACMQLIGWL------NSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIA 889 (1139)
T ss_dssp HHHHHHHHHHSCTTHHHHHHHHS------CCCHHHHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHhhhc------cCCcHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhccccccc
Confidence 34666666777777666655443 223433334556777888888888888765432 00
Q ss_pred --------CHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCC----hhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCC
Q 015370 156 --------TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFN----ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNV 223 (408)
Q Consensus 156 --------~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~----~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~ 223 (408)
-..=|..++..+-+.+.++.+.++-....+..-+-+ ...|..+..++...|++++|...+-.+.....
T Consensus 890 ~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lAi~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~~pd~~~ 969 (1139)
T 4fhn_B 890 EKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDEDLSIAITHETLKTACAAGKFDAAHVALMVLSTTPL 969 (1139)
T ss_dssp HTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHHHHHSSS
T ss_pred ccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHhCCCHHH
Confidence 012245556666666666666655554443211111 11456666666666666666666666654433
Q ss_pred CCCHHHHHHHHHHHHhcCCH
Q 015370 224 VPDIFTYNLWISSCAATLNI 243 (408)
Q Consensus 224 ~p~~~~~~~ll~~~~~~g~~ 243 (408)
+ ......++..+|..|..
T Consensus 970 r--~~cLr~LV~~lce~~~~ 987 (1139)
T 4fhn_B 970 K--KSCLLDFVNQLTKQGKI 987 (1139)
T ss_dssp C--HHHHHHHHHHHHHHCCH
T ss_pred H--HHHHHHHHHHHHhCCCh
Confidence 2 33445555555554443
No 240
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=93.22 E-value=1.4 Score=43.71 Aligned_cols=251 Identities=8% Similarity=-0.047 Sum_probs=131.5
Q ss_pred hcccHHHHHHHHHHHHhccCCCCChHHH--HHHHHHHHhhcChHHHHHHHhcCCCC-C--------CCHHHHHHHHHHHH
Q 015370 100 KSQRYKHALEISEWMVTHKEFVLSDSDY--ATRIDLMTKVFGIHSGERYFEGLPLS-A--------KTSETYTALLHLYA 168 (408)
Q Consensus 100 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~--~~li~~~~~~g~~~~a~~~~~~~~~~-~--------~~~~~~~~ll~~~~ 168 (408)
..|+.++++.++....-.+ -..+..+- ..+.-+....|..+++..++...... . +....-.++.-+++
T Consensus 386 h~g~~~~gl~~L~~yL~~~-~s~~~~ik~GAllaLGli~ag~~~~~~~lL~~~L~~~~~~~~~~~~~~ir~gAaLGLGla 464 (963)
T 4ady_A 386 HKGNLLEGKKVMAPYLPGS-RASSRFIKGGSLYGLGLIYAGFGRDTTDYLKNIIVENSGTSGDEDVDVLLHGASLGIGLA 464 (963)
T ss_dssp TSSCTTTHHHHHTTTSTTS-CCSCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHHHSSCCSCHHHHHHHHHHHHHHHHH
T ss_pred ccCchHHHHHHHHHhcccc-CCCcHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHcCccccccccccHHHHHHHHHHHHHH
Confidence 4455555555554433211 01222222 22333445566656677665553321 1 11222233333343
Q ss_pred cCCC-HHHHHHHHHHHHhCCCCCChhhHH--HHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHH--HHHhcCCH
Q 015370 169 GAKW-TEKAEELFERVKQSNLSFNALMYN--EMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS--SCAATLNI 243 (408)
Q Consensus 169 ~~~~-~~~A~~~~~~m~~~~~~p~~~~~~--~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~--~~~~~g~~ 243 (408)
-.|. -+++.+.+..+....- +...... +|...+.-.|+-+-...++..+.+.. +..+...+.- ++...|+.
T Consensus 465 ~~GS~~eev~e~L~~~L~dd~-~~~~~~AalALGli~vGTgn~~ai~~LL~~~~e~~---~e~vrR~aalgLGll~~g~~ 540 (963)
T 4ady_A 465 AMGSANIEVYEALKEVLYNDS-ATSGEAAALGMGLCMLGTGKPEAIHDMFTYSQETQ---HGNITRGLAVGLALINYGRQ 540 (963)
T ss_dssp STTCCCHHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCS---CHHHHHHHHHHHHHHTTTCG
T ss_pred hcCCCCHHHHHHHHHHHhcCC-HHHHHHHHHHHhhhhcccCCHHHHHHHHHHHhccC---cHHHHHHHHHHHHhhhCCCh
Confidence 3343 2456666666655431 1111122 22333456678787888888776542 3333333333 44477899
Q ss_pred HHHHHHHHHHhcCCCCCCCHHH-HH---HHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCHHHHH
Q 015370 244 DQVKKFLDEMSCDSGGSDDWVK-YV---NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID 319 (408)
Q Consensus 244 ~~a~~~~~~~~~~~~~~~~~~~-~~---~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~ 319 (408)
+.+..+++.+... .++.+ |. ++.-+|+..|+.....+ ++..+.... ..++.-...+.-++...|+.+.+.
T Consensus 541 e~~~~li~~L~~~----~dp~vRygaa~alglAyaGTGn~~aIq~-LL~~~~~d~-~d~VRraAViaLGlI~~g~~e~v~ 614 (963)
T 4ady_A 541 ELADDLITKMLAS----DESLLRYGGAFTIALAYAGTGNNSAVKR-LLHVAVSDS-NDDVRRAAVIALGFVLLRDYTTVP 614 (963)
T ss_dssp GGGHHHHHHHHHC----SCHHHHHHHHHHHHHHTTTSCCHHHHHH-HHHHHHHCS-CHHHHHHHHHHHHHHTSSSCSSHH
T ss_pred HHHHHHHHHHHhC----CCHHHHHHHHHHHHHHhcCCCCHHHHHH-HHHHhccCC-cHHHHHHHHHHHHhhccCCHHHHH
Confidence 9999898888863 23222 32 44556788888877777 676665432 223333333444555567777777
Q ss_pred HHHHHHHhccCCCChhhHHHHHHHHHhcCCH-HHHHHHHHHHHh
Q 015370 320 QIWKSLRMTKQKMTSRNYICILSSYLMLGHL-KEVGEIIDQWKQ 362 (408)
Q Consensus 320 ~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~-~~A~~~~~~~~~ 362 (408)
++++.+...+ .|....-..+.-+....|.. .+|.+++..+..
T Consensus 615 rlv~~L~~~~-d~~VR~gAalALGli~aGn~~~~aid~L~~L~~ 657 (963)
T 4ady_A 615 RIVQLLSKSH-NAHVRCGTAFALGIACAGKGLQSAIDVLDPLTK 657 (963)
T ss_dssp HHTTTGGGCS-CHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHT
T ss_pred HHHHHHHhcC-CHHHHHHHHHHHHHhccCCCcHHHHHHHHHHcc
Confidence 7777655543 44444444444455545543 578888888765
No 241
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=93.07 E-value=0.93 Score=32.77 Aligned_cols=80 Identities=11% Similarity=-0.032 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHH---HHHHHHHHHhhCCCCC--CHHHHHHHHHHHHhcCChHHHH
Q 015370 316 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE---VGEIIDQWKQSATSDF--DISACNRLLGAFSDVGLTEKAN 390 (408)
Q Consensus 316 ~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~---A~~~~~~~~~~~~~~~--~~~~~~~li~~~~~~g~~~~a~ 390 (408)
..+.+-|.+....|. |+..+--.+..++.+..+..+ ++.++++..+.+ .| .....-.|.-++.+.|++++|.
T Consensus 18 ~~~~~~y~~e~~~~~-~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~--~p~~~Rd~lY~LAvg~yklg~Y~~A~ 94 (126)
T 1nzn_A 18 LKFEKKFQSEKAAGS-VSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKG--SKEEQRDYVFYLAVGNYRLKEYEKAL 94 (126)
T ss_dssp HHHHHHHHHHHHHSC-CCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTS--CHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHhccCC-CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC--CcchHHHHHHHHHHHHHHhhhHHHHH
Confidence 334444443333332 344444444444554444333 555555554432 12 1222223444555555555555
Q ss_pred HHHHHHHh
Q 015370 391 EFHMLLLQ 398 (408)
Q Consensus 391 ~~~~~m~~ 398 (408)
++++.+++
T Consensus 95 ~~~~~lL~ 102 (126)
T 1nzn_A 95 KYVRGLLQ 102 (126)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55555555
No 242
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=93.05 E-value=0.55 Score=39.58 Aligned_cols=67 Identities=9% Similarity=0.026 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHH-----cCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHh-cCCHHHHHHHHHHHHhccCC
Q 015370 264 VKYVNLVNIYIT-----ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAG-LGNKDKIDQIWKSLRMTKQK 331 (408)
Q Consensus 264 ~~~~~li~~~~~-----~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~-~~~~~~a~~~~~~m~~~~~~ 331 (408)
..|..+...|.+ .|+.++|.+ .|++...-.+..+..++......++. .|+.+++.+.+++.......
T Consensus 200 sA~~~LG~lY~~vPp~~gGd~ekA~~-~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~ 272 (301)
T 3u64_A 200 AVWNVLTKFYAAAPESFGGGMEKAHT-AFEHLTRYCSAHDPDHHITYADALCIPLNNRAGFDEALDRALAIDPE 272 (301)
T ss_dssp HHHHHHHHHHHHSCTTTTCCHHHHHH-HHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGG
T ss_pred HHHHHHHHHHHhCCCccCCCHHHHHH-HHHHHHHhCCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCC
Confidence 345555555555 255555555 55555444443334444444554444 25555555555555544333
No 243
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=92.90 E-value=1.3 Score=32.29 Aligned_cols=69 Identities=6% Similarity=-0.103 Sum_probs=35.0
Q ss_pred cccCccchHHHHHHHHHhcCC---HHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 015370 294 ITQRQWITYDFLIILYAGLGN---KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ 362 (408)
Q Consensus 294 ~~~~~~~~~~~li~~~~~~~~---~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~ 362 (408)
+..|+..+--.+..++.+..+ ..+++.+++.+.+.+..-....+-.|.-++.+.|++++|.++.+.+.+
T Consensus 35 ~~~vs~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~ 106 (134)
T 3o48_A 35 GPTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFE 106 (134)
T ss_dssp GGGSCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT
T ss_pred CCCCChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 333444444444555555443 335556666655543211222333455566666666666666666665
No 244
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=92.67 E-value=5.3 Score=41.26 Aligned_cols=51 Identities=12% Similarity=-0.007 Sum_probs=27.9
Q ss_pred HHHHHHhhcChHHHHHHHhcCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHH
Q 015370 130 RIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERV 183 (408)
Q Consensus 130 li~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~A~~~~~~m 183 (408)
++..+...+..+.+.++....+. +...--.+..+|...|++++|.+.|++.
T Consensus 818 l~~~l~~~~~~~~~~~l~~~~~~---~~~~~yl~g~~~L~~ge~~~A~~~F~ka 868 (1139)
T 4fhn_B 818 LVEKLFLFKQYNACMQLIGWLNS---DPIAVYLKALIYLKSKEAVKAVRCFKTT 868 (1139)
T ss_dssp HHHHHHHHSCTTHHHHHHHHSCC---CHHHHHHHHHHHHHTTCHHHHHHHHHTC
T ss_pred HHHHHHHhhhHHHHHHHhhhccC---CcHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 44445555566555555444432 3333344556666677777777776553
No 245
>3lvg_A Clathrin heavy chain 1; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} PDB: 3lvh_A
Probab=92.62 E-value=9.9e-05 Score=66.17 Aligned_cols=269 Identities=11% Similarity=0.113 Sum_probs=172.4
Q ss_pred CCCCcchHHHHHhhhcCCCCcHHHHHHHHHHcCCCCChhhHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCChHHHHHH
Q 015370 51 NSDGKDDLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATR 130 (408)
Q Consensus 51 ~~~~~~~l~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l 130 (408)
.++..+++.+++-+...+...+.+.++.+++. -|+..|..+|.+..+.|.+++-+..+...++. .-++..=+.|
T Consensus 49 ~~~n~p~VWs~LgkAqL~~~~v~eAIdsyIkA---~Dps~y~eVi~~A~~~~~~edLv~yL~MaRk~---~ke~~IDteL 122 (624)
T 3lvg_A 49 ERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKA---DDPSSYMEVVQAANTSGNWEELVKYLQMARKK---ARESYVETEL 122 (624)
T ss_dssp SSCCCCCCSSSHHHHTTTSSSCTTTTTSSCCC---SCCCSSSHHHHHTTTSSCCTTHHHHHHTTSTT---CCSTTTTHHH
T ss_pred HHhCCccHHHHHHHHHHccCchHHHHHHHHhC---CChHHHHHHHHHHHhCCCHHHHHHHHHHHHHH---hcccccHHHH
Confidence 34445555555544333333333333333333 46677888999999999999988888766654 3445556788
Q ss_pred HHHHHhhcChHHHHHHHhcCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHH
Q 015370 131 IDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 210 (408)
Q Consensus 131 i~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~ 210 (408)
+-+|++.++..+-++ ... +||..-...+.+-|...|.++.|.-+|..+.. |..|...+.+.|++..
T Consensus 123 i~ayAk~~rL~elEe----fl~-~~N~A~iq~VGDrcf~e~lYeAAKilys~isN---------~akLAstLV~L~~yq~ 188 (624)
T 3lvg_A 123 IFALAKTNRLAELEE----FIN-GPNNAHIQQVGDRCYDEKMYDAAKLLYNNVSN---------FGRLASTLVHLGEYQA 188 (624)
T ss_dssp HHHHHTSCSSSTTTS----TTS-CCSSSCTHHHHHHHHHSCCSTTSSTTGGGSCC---------CTTTSSSSSSCSGGGS
T ss_pred HHHHHhhCcHHHHHH----HHc-CCCcccHHHHHHHHHHccCHHHHHHHHHhCcc---------HHHHHHHHHHHHHHHH
Confidence 999999999776333 222 47776677788888888888888777765443 3344555667777776
Q ss_pred HHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHH
Q 015370 211 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 290 (408)
Q Consensus 211 a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~ 290 (408)
|.+.- ++. -+..||.-+-.+|...+.+.-|.-.--.+.-.... ...++..|-..|.+++-+. +++.-
T Consensus 189 AVdaA---rKA---ns~ktWKeV~~ACvd~~EfrLAqicGLniIvhade------L~elv~~YE~~G~f~ELIs-LlEag 255 (624)
T 3lvg_A 189 AVDGA---RKA---NSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADE------LEELINYYQDRGYFEELIT-MLEAA 255 (624)
T ss_dssp STTTT---TTC---CSSCSHHHHTHHHHHSCTTTTTTHHHHHHHCCSSC------CSGGGSSSSTTCCCTTSTT-THHHH
T ss_pred HHHHH---Hhc---CChhHHHHHHHHHhCchHHHHHHHhcchhcccHHH------HHHHHHHHHhCCCHHHHHH-HHHHH
Confidence 65432 221 35678888889999999988776554444432111 1256788999999999888 66554
Q ss_pred HHhcccCccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHH
Q 015370 291 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW 360 (408)
Q Consensus 291 ~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~ 360 (408)
. +........|+-|.-.|++- ++++..+-++..- -+.|.. -+|++|.+...|.++.-++...
T Consensus 256 l-glErAHmGmFTELaILYsKY-~PeKlmEHlklf~---sriNip---KviracE~ahLW~ElvfLY~~y 317 (624)
T 3lvg_A 256 L-GLERAHMGMFTELAILYSKF-KPQKMREHLELFW---SRVNIP---KVLRAAEQAHLWAELVFLYDKY 317 (624)
T ss_dssp T-TSTTCCHHHHHHHHHHHHSS-CTTHHHHHHTTSS---SSSCCT---TTHHHHTTTTCHHHHHHHHHHH
T ss_pred h-CCCchhHHHHHHHHHHHHhc-CHHHHHHHHHHHH---HhccHH---HHHHHHHHHhhHHHHHHHHhcc
Confidence 3 34455667888888888775 4555555443211 122221 3677777777777777776653
No 246
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=92.59 E-value=1.4 Score=42.73 Aligned_cols=51 Identities=14% Similarity=-0.099 Sum_probs=37.9
Q ss_pred HHhcCCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 015370 344 YLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 396 (408)
Q Consensus 344 ~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m 396 (408)
|...|+++-|+.+-++.+... +-+..+|..|..+|...|+++.|+-.++.+
T Consensus 347 Ll~K~~~elAL~~Ak~AV~~a--PseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 347 LLNRGDYELALGVSNTSTELA--LDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHTTCHHHHHHHHHHHHHHC--SSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HhccCcHHHHHHHHHHHHhcC--chhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 456678888888888777643 346778888888888888888888777766
No 247
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=92.29 E-value=0.66 Score=41.42 Aligned_cols=68 Identities=9% Similarity=-0.021 Sum_probs=32.7
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhc----CCCCCCCHHH
Q 015370 197 EMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC----DSGGSDDWVK 265 (408)
Q Consensus 197 ~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~----~~~~~~~~~~ 265 (408)
.++..+...|++++|...+..+.... +.+...+..+|.++.+.|+..+|.+.|+.+.+ ..|+.|+..+
T Consensus 176 ~~~~~~l~~g~~~~a~~~l~~~~~~~-P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~~eLG~~P~~~l 247 (388)
T 2ff4_A 176 AKAEAEIACGRASAVIAELEALTFEH-PYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGPTL 247 (388)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCCHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCCHHH
Confidence 34444455555555555555544332 12444555555555555555555555544322 1345555443
No 248
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=91.64 E-value=6.9 Score=34.73 Aligned_cols=93 Identities=13% Similarity=0.004 Sum_probs=50.1
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHhccCCCChh-----hHHHHHHHHHhcCCHHHHHHHHHHHHhhC-CCCCCHHHHHH--
Q 015370 304 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR-----NYICILSSYLMLGHLKEVGEIIDQWKQSA-TSDFDISACNR-- 375 (408)
Q Consensus 304 ~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~-----~~~~li~~~~~~g~~~~A~~~~~~~~~~~-~~~~~~~~~~~-- 375 (408)
-++..|...|++.+|.+++.++.+.=-+.|.. .|..-+..|...+++.++...+....... .+.+++..-..
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~ 183 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGALD 183 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHHH
Confidence 45666777777777777777665532222222 24445666777777777777776654321 11133322111
Q ss_pred --HHHHHH-hcCChHHHHHHHHHH
Q 015370 376 --LLGAFS-DVGLTEKANEFHMLL 396 (408)
Q Consensus 376 --li~~~~-~~g~~~~a~~~~~~m 396 (408)
-...+. ..++|+.|...|-+.
T Consensus 184 ~~~Gi~~l~~~rdyk~A~~~F~ea 207 (394)
T 3txn_A 184 LQSGILHAADERDFKTAFSYFYEA 207 (394)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred HHhhHHHHHhccCHHHHHHHHHHH
Confidence 112234 567777776665544
No 249
>1v54_E Cytochrome C oxidase polypeptide VA; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: a.118.11.1 PDB: 1oco_E* 1occ_E* 1ocz_E* 1ocr_E* 1v55_E* 2dyr_E* 2dys_E* 2eij_E* 2eik_E* 2eil_E* 2eim_E* 2ein_E* 2occ_E* 2ybb_P* 2zxw_E* 3abk_E* 3abl_E* 3abm_E* 3ag1_E* 3ag2_E* ...
Probab=91.01 E-value=2 Score=29.40 Aligned_cols=48 Identities=6% Similarity=0.070 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 015370 173 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 220 (408)
Q Consensus 173 ~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~ 220 (408)
.=++.+-++.+-..++.|++....+.+.+|.+.+++..|.++|+..+.
T Consensus 26 ~~e~rrglN~l~~~DlVP~P~ii~aaLrAcRRvND~alAVR~lE~iK~ 73 (109)
T 1v54_E 26 AWELRKGMNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVKD 73 (109)
T ss_dssp HHHHHHHHHHHTTSSBCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccCCCcHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 334555555555555666666666666666666666666666655553
No 250
>2uwj_G Type III export protein PSCG; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=90.60 E-value=2.9 Score=28.50 Aligned_cols=87 Identities=15% Similarity=0.125 Sum_probs=64.8
Q ss_pred ccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHHHHhcCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHH
Q 015370 102 QRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFE 181 (408)
Q Consensus 102 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~A~~~~~ 181 (408)
...++|..+-+++...+ . ....--+-+..+...|++++|..+.+.+. -||...|-+|.. .+.|..+++..-+.
T Consensus 20 H~HqEA~tIAdwL~~~~--~-~E~v~lIR~sSLmNrG~Yq~Al~l~~~~c--~pdlepw~ALce--~rlGl~s~le~rL~ 92 (115)
T 2uwj_G 20 HCHEEALCIAEWLERLG--Q-DEAARLIRISSLANQGRYQEALAFAHGNP--WPALEPWFALCE--WHLGLGAALDRRLA 92 (115)
T ss_dssp TCHHHHHHHHHHHHHTT--C-HHHHHHHHHHHHHHTTCHHHHHGGGTTCC--CGGGHHHHHHHH--HHTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCC--c-HHHHHHHHHHHHHcchhHHHHHHhcCCCC--CchHHHHHHHHH--HhcccHHHHHHHHH
Confidence 46789999999998765 2 22222233456778999999999999888 499999988865 47788899999888
Q ss_pred HHHhCCCCCChhhHH
Q 015370 182 RVKQSNLSFNALMYN 196 (408)
Q Consensus 182 ~m~~~~~~p~~~~~~ 196 (408)
++...| .|....|.
T Consensus 93 ~la~sg-~p~~q~Fa 106 (115)
T 2uwj_G 93 GLGGSS-DPALADFA 106 (115)
T ss_dssp HHHTCS-SHHHHHHH
T ss_pred HHHhCC-CHHHHHHH
Confidence 888887 44444443
No 251
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=90.34 E-value=3.1 Score=28.41 Aligned_cols=87 Identities=15% Similarity=0.094 Sum_probs=63.7
Q ss_pred ccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHHHHhcCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHH
Q 015370 102 QRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFE 181 (408)
Q Consensus 102 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~A~~~~~ 181 (408)
...++|..+-+++...+ . ....--+-+..+...|++++|..+.+.+. -||...|-+|... +.|..+++..-+.
T Consensus 21 H~HqEA~tIAdwL~~~~--~-~E~v~lIR~sSLmNrG~Yq~Al~l~~~~c--~pdlepw~ALce~--rlGl~s~le~rL~ 93 (116)
T 2p58_C 21 HYHEEANCIAEWLHLKG--E-EEAVQLIRLSSLMNRGDYASALQQGNKLA--YPDLEPWLALCEY--RLGLGSALESRLN 93 (116)
T ss_dssp TCHHHHHHHHHHHHHTT--C-HHHHHHHHHHHHHHTTCHHHHHHHHTTSC--CGGGHHHHHHHHH--HHTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCC--c-HHHHHHHHHHHHHcchhHHHHHHhcCCCC--CchHHHHHHHHHH--hcccHHHHHHHHH
Confidence 46788989999988765 2 22222233456678899999999999988 4999999888664 6688888888888
Q ss_pred HHHhCCCCCChhhHH
Q 015370 182 RVKQSNLSFNALMYN 196 (408)
Q Consensus 182 ~m~~~~~~p~~~~~~ 196 (408)
++...| .|....|.
T Consensus 94 ~la~sg-~p~~q~Fa 107 (116)
T 2p58_C 94 RLARSQ-DPRIQTFV 107 (116)
T ss_dssp HHTTCC-CHHHHHHH
T ss_pred HHHhCC-CHHHHHHH
Confidence 888887 44444443
No 252
>1v54_E Cytochrome C oxidase polypeptide VA; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: a.118.11.1 PDB: 1oco_E* 1occ_E* 1ocz_E* 1ocr_E* 1v55_E* 2dyr_E* 2dys_E* 2eij_E* 2eik_E* 2eil_E* 2eim_E* 2ein_E* 2occ_E* 2ybb_P* 2zxw_E* 3abk_E* 3abl_E* 3abm_E* 3ag1_E* 3ag2_E* ...
Probab=90.15 E-value=2.1 Score=29.31 Aligned_cols=63 Identities=10% Similarity=-0.002 Sum_probs=50.0
Q ss_pred CHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCCHHHHHHHHH
Q 015370 314 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLG 378 (408)
Q Consensus 314 ~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~li~ 378 (408)
+.-++.+-++.+....+.|++....+.+++|-+.+++..|.++|+-.+.+... ...+|..+++
T Consensus 25 D~~e~rrglN~l~~~DlVP~P~ii~aaLrAcRRvND~alAVR~lE~iK~K~~~--~~~iY~~~lq 87 (109)
T 1v54_E 25 DAWELRKGMNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVKDKAGP--HKEIYPYVIQ 87 (109)
T ss_dssp CHHHHHHHHHHHTTSSBCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTT--CTTHHHHHHH
T ss_pred cHHHHHHHHHHHhccccCCCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC--chhhHHHHHH
Confidence 45567777788888888999999999999999999999999999998876533 3345665654
No 253
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=89.85 E-value=4.7 Score=29.75 Aligned_cols=68 Identities=6% Similarity=-0.084 Sum_probs=38.5
Q ss_pred cCccchHHHHHHHHHhcCC---HHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q 015370 296 QRQWITYDFLIILYAGLGN---KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 363 (408)
Q Consensus 296 ~~~~~~~~~li~~~~~~~~---~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~ 363 (408)
.++..+--.+..++.+..+ ..+++.+++.+...+..-.....-.|.-++.+.|++++|.++.+.+.+.
T Consensus 36 ~vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~ 106 (144)
T 1y8m_A 36 TATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEH 106 (144)
T ss_dssp TSCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHT
T ss_pred CCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 3444444455555665544 3456666666665432212223334556677777777777777777763
No 254
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=89.15 E-value=4.9 Score=30.55 Aligned_cols=25 Identities=8% Similarity=-0.001 Sum_probs=19.5
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHH
Q 015370 372 ACNRLLGAFSDVGLTEKANEFHMLL 396 (408)
Q Consensus 372 ~~~~li~~~~~~g~~~~a~~~~~~m 396 (408)
.--.+..+|.+.|++++|+.+++.+
T Consensus 124 lkykia~C~~~l~~~~~Ai~~Le~I 148 (167)
T 3ffl_A 124 VKYKLAECYTVLKQDKDAIAILDGI 148 (167)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHCCHHHHHHHHhcC
Confidence 3334778888999999999988764
No 255
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=88.16 E-value=18 Score=34.34 Aligned_cols=251 Identities=10% Similarity=-0.001 Sum_probs=116.0
Q ss_pred HHHHHHHHhhcChHHHHHHHhcCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCC
Q 015370 128 ATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 207 (408)
Q Consensus 128 ~~li~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~ 207 (408)
+..+..+.+.+++.....++.. . +.+...-.....+....|+-.+|......+=..| ......+..++..+.+.|.
T Consensus 76 ~~~l~~l~~~~~w~~~l~~~~~-~--p~~~~~~c~~~~A~~~~G~~~~a~~~~~~lW~~~-~~~p~~c~~l~~~~~~~g~ 151 (618)
T 1qsa_A 76 SRFVNELARREDWRGLLAFSPE-K--PGTTEAQCNYYYAKWNTGQSEEAWQGAKELWLTG-KSQPNACDKLFSVWRASGK 151 (618)
T ss_dssp HHHHHHHHHTTCHHHHHHHCCS-C--CSSHHHHHHHHHHHHHTTCHHHHHHHHHHHHSCS-SCCCTHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCHHHHHHhccC-C--CCCHHHHHHHHHHHHHcCChhHHHHHHHHHHhCC-CCCcHHHHHHHHHHHHCCC
Confidence 4445666667777777776655 2 3456656666677777777766766666655444 3345666777777766554
Q ss_pred HHH--HHHHHHHHHhCC-----------CCCCHHH-HHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHH---HHHHHH
Q 015370 208 VEK--VALVVEEIKRKN-----------VVPDIFT-YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWV---KYVNLV 270 (408)
Q Consensus 208 ~~~--a~~~~~~m~~~g-----------~~p~~~~-~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~---~~~~li 270 (408)
+.. ...-++.+...| +.++... ...++.... ++..+....... .++.. .+...+
T Consensus 152 lt~~~~~~R~~~al~~~~~~~a~~l~~~l~~~~~~~a~~~~al~~---~p~~~~~~~~~~------~~~~~~~~~~~~~~ 222 (618)
T 1qsa_A 152 QDPLAYLERIRLAMKAGNTGLVTVLAGQMPADYQTIASAIISLAN---NPNTVLTFARTT------GATDFTRQMAAVAF 222 (618)
T ss_dssp SCHHHHHHHHHHHHHTTCHHHHHHHHHTCCGGGHHHHHHHHHHHH---CGGGHHHHHHHS------CCCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHhCCHHHHHHHHHHHHHHh---ChHhHHHHHhcc------CCChhhHHHHHHHH
Confidence 322 222222222222 1111111 111111111 122222211110 11111 111122
Q ss_pred HHHHHcCchhhhHHHHHHHHHHhcccCccc----hHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHh
Q 015370 271 NIYITASHLVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLM 346 (408)
Q Consensus 271 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~----~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~ 346 (408)
.-+.+. +.+.|.. .+........- +.. .+..+.......+...++...+...... .++.......+....+
T Consensus 223 ~rlar~-d~~~A~~-~~~~~~~~~~~-~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~e~~~r~Alr 297 (618)
T 1qsa_A 223 ASVARQ-DAENARL-MIPSLAQAQQL-NEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMR--SQSTSLIERRVRMALG 297 (618)
T ss_dssp HHHHHH-CHHHHHH-HHHHHHHHTTC-CHHHHHHHHHHHHHTSCSTTCCHHHHHHHHHHHHT--CCCHHHHHHHHHHHHH
T ss_pred HHHHhc-CHHHHHH-HHHhhhhccCC-CHHHHHHHHHHHHHHHHHcCCChHHHHHHHhcccc--CCChHHHHHHHHHHHH
Confidence 223332 5566666 55555433211 211 1222222223334244555555543322 2233333334444456
Q ss_pred cCCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHh
Q 015370 347 LGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398 (408)
Q Consensus 347 ~g~~~~A~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~ 398 (408)
.|+++.|...|+.|.......+-..-| +.+++...|+.++|..+|+.+.+
T Consensus 298 ~~d~~~a~~~~~~l~~~~~~~~r~~YW--~~ra~~~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 298 TGDRRGLNTWLARLPMEAKEKDEWRYW--QADLLLERGREAEAKEILHQLMQ 347 (618)
T ss_dssp HTCHHHHHHHHHHSCTTGGGSHHHHHH--HHHHHHHTTCHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHccccccccHhHHHH--HHHHHHHcCCHHHHHHHHHHHhc
Confidence 677777777777765422111111223 55566677777777777776653
No 256
>2y69_E Cytochrome C oxidase subunit 5A; electron transport, complex IV, proton pumps, membrane prote; HET: TPO HEA CHD PEK PGV DMU; 1.95A {Bos taurus}
Probab=87.53 E-value=4.7 Score=29.34 Aligned_cols=63 Identities=11% Similarity=0.079 Sum_probs=38.2
Q ss_pred CHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHH
Q 015370 172 WTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 235 (408)
Q Consensus 172 ~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~ 235 (408)
+.=+..+-++.+...++.|++....+.+.+|.+.+++..|.++|+-.+.+ +.+...+|..+++
T Consensus 68 D~wElrrglN~l~~~DlVPeP~Ii~AALrAcRRvNDfalAVR~lE~vK~K-~~~~~~iY~y~lq 130 (152)
T 2y69_E 68 DAWELRKGMNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVKDK-AGPHKEIYPYVIQ 130 (152)
T ss_dssp CHHHHHHHHHHHTTSSBCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-TTTCTTHHHHHHH
T ss_pred cHHHHHHHHHHHhccccCCCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHh-cCCchhhHHHHHH
Confidence 33445666666666667777777777777777777777777777666643 2223334544443
No 257
>2y69_E Cytochrome C oxidase subunit 5A; electron transport, complex IV, proton pumps, membrane prote; HET: TPO HEA CHD PEK PGV DMU; 1.95A {Bos taurus}
Probab=86.19 E-value=4.5 Score=29.42 Aligned_cols=63 Identities=10% Similarity=-0.024 Sum_probs=49.7
Q ss_pred CHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCCHHHHHHHHH
Q 015370 314 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLG 378 (408)
Q Consensus 314 ~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~li~ 378 (408)
|.-+..+-++.+....+.|++......+++|-+.+|+..|.++|+-.+.+.. +...+|..+++
T Consensus 68 D~wElrrglN~l~~~DlVPeP~Ii~AALrAcRRvNDfalAVR~lE~vK~K~~--~~~~iY~y~lq 130 (152)
T 2y69_E 68 DAWELRKGMNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVKDKAG--PHKEIYPYVIQ 130 (152)
T ss_dssp CHHHHHHHHHHHTTSSBCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTT--TCTTHHHHHHH
T ss_pred cHHHHHHHHHHHhccccCCCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcC--CchhhHHHHHH
Confidence 3445666777777888899999999999999999999999999999887653 33445665654
No 258
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=85.60 E-value=8.2 Score=31.98 Aligned_cols=56 Identities=13% Similarity=0.078 Sum_probs=45.3
Q ss_pred HHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhC
Q 015370 165 HLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 221 (408)
Q Consensus 165 ~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~ 221 (408)
....+.|++++|++....-++.. |-|...-..++..+|-.|+|+.|.+-++...+.
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR~~-P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l 60 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIKAS-PKDASLRSSFIELLCIDGDFERADEQLMQSIKL 60 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHhC-CcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Confidence 44667888899988888877765 667888888889999999999998888887764
No 259
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=84.26 E-value=10 Score=27.89 Aligned_cols=66 Identities=6% Similarity=-0.065 Sum_probs=31.0
Q ss_pred CCHHHHHHHHHHHHcCCC---HHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 015370 155 KTSETYTALLHLYAGAKW---TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 220 (408)
Q Consensus 155 ~~~~~~~~ll~~~~~~~~---~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~ 220 (408)
++..+--.+..++.++.+ ..+++.+++++...+-.-.....--|.-++.+.|++++|.+..+.+.+
T Consensus 37 vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~ 105 (144)
T 1y8m_A 37 ATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFE 105 (144)
T ss_dssp SCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 444444445555555543 234455555554432111222333444455555555555555555555
No 260
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=84.06 E-value=22 Score=31.49 Aligned_cols=163 Identities=11% Similarity=-0.014 Sum_probs=79.9
Q ss_pred HHHHHHHHHhhcChHHHHHHHhcCCCC------CCCHHHHHHHHHHHHcCC-CHHHHHHHHHHHHhCCCCCChhhH----
Q 015370 127 YATRIDLMTKVFGIHSGERYFEGLPLS------AKTSETYTALLHLYAGAK-WTEKAEELFERVKQSNLSFNALMY---- 195 (408)
Q Consensus 127 ~~~li~~~~~~g~~~~a~~~~~~~~~~------~~~~~~~~~ll~~~~~~~-~~~~A~~~~~~m~~~~~~p~~~~~---- 195 (408)
...|...|.+.|+.++..+++.....- .........|++.+.... ..+.-.++..+..+.. .-+-.+|
T Consensus 22 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~kak~~k~v~~l~~~~~~~~~~~~~~~~~~~~~~~~a-~~~~r~flr~~ 100 (394)
T 3txn_A 22 ILQQGELYKQEGKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWA-KQEKRTFLRQS 100 (394)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTTTGGGGSCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHH-HHTTCHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 344555556666666665555554432 013444555555555532 2333333333333210 0011222
Q ss_pred --HHHHHHHHhcCCHHHHHHHHHHHHhCCCCCC-----HHHHHHHHHHHHhcCCHHHHHHHHHHHhcCC-CCCCCHHHHH
Q 015370 196 --NEMMTLYMSVGQVEKVALVVEEIKRKNVVPD-----IFTYNLWISSCAATLNIDQVKKFLDEMSCDS-GGSDDWVKYV 267 (408)
Q Consensus 196 --~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~-----~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~-~~~~~~~~~~ 267 (408)
.-++..|...|++.+|.+++..+.+.=-..| ...|..-+..|...+++.++...+....... .+.+++....
T Consensus 101 l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a 180 (394)
T 3txn_A 101 LEARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQG 180 (394)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHH
Confidence 2466777777777777777776664211111 1334455566777777777777776654321 1223332211
Q ss_pred ----HHHHHHH-HcCchhhhHHHHHHHHH
Q 015370 268 ----NLVNIYI-TASHLVNAESSTLVEAE 291 (408)
Q Consensus 268 ----~li~~~~-~~~~~~~a~~~~~~~~~ 291 (408)
.-...+. ..+++..|.. .|.+..
T Consensus 181 ~i~~~~Gi~~l~~~rdyk~A~~-~F~eaf 208 (394)
T 3txn_A 181 ALDLQSGILHAADERDFKTAFS-YFYEAF 208 (394)
T ss_dssp HHHHHHHHHHHHTTSCHHHHHH-HHHHHH
T ss_pred HHHHHhhHHHHHhccCHHHHHH-HHHHHH
Confidence 1122334 5677777777 555444
No 261
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=84.03 E-value=6.2 Score=32.68 Aligned_cols=88 Identities=15% Similarity=0.105 Sum_probs=47.0
Q ss_pred HhcCCHHHHHHHHHHHHhccCCCChhhH--HHHHHHHHhcCCHHHHHHHHHHHHhhCCCCC---CHHHHHHHHHHHHhcC
Q 015370 310 AGLGNKDKIDQIWKSLRMTKQKMTSRNY--ICILSSYLMLGHLKEVGEIIDQWKQSATSDF---DISACNRLLGAFSDVG 384 (408)
Q Consensus 310 ~~~~~~~~a~~~~~~m~~~~~~p~~~~~--~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~---~~~~~~~li~~~~~~g 384 (408)
+..+......++.+.+.+.|..++.... ...+...++.|+.+-+..+++. .+ ..+ |..-.+.| ...++.|
T Consensus 190 ~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---~g-~~~~~~~~~g~t~l-~~A~~~~ 264 (285)
T 1wdy_A 190 LLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQ---EH-IEINDTDSDGKTAL-LLAVELK 264 (285)
T ss_dssp HHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHS---SS-CCTTCCCTTSCCHH-HHHHHTT
T ss_pred HHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhc---cC-CCccccCCCCCcHH-HHHHHcC
Confidence 4456655556677777777776654321 1344555667887766666552 11 112 22222223 2334445
Q ss_pred ChHHHHHHHHHHHhcCCCCCCC
Q 015370 385 LTEKANEFHMLLLQKNCAPTNA 406 (408)
Q Consensus 385 ~~~~a~~~~~~m~~~g~~p~~~ 406 (408)
+. ++++.+++.|..|+..
T Consensus 265 ~~----~i~~~Ll~~Ga~~~~~ 282 (285)
T 1wdy_A 265 LK----KIAELLCKRGASTDCG 282 (285)
T ss_dssp CH----HHHHHHHHHSSCSCCS
T ss_pred cH----HHHHHHHHcCCCCCcc
Confidence 54 4566667778777653
No 262
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=81.53 E-value=7.5 Score=29.52 Aligned_cols=29 Identities=14% Similarity=0.135 Sum_probs=24.3
Q ss_pred hhHHHHHHHHHhcccHHHHHHHHHHHHhc
Q 015370 89 SELRHILKELRKSQRYKHALEISEWMVTH 117 (408)
Q Consensus 89 ~~~~~li~~~~~~~~~~~a~~~~~~~~~~ 117 (408)
.++..+.+++...+++.+|...|++..+.
T Consensus 64 ~~l~~ladalf~~~eyrrA~~~y~qALq~ 92 (167)
T 3ffl_A 64 QLLVYHADSLFHDKEYRNAVSKYTMALQQ 92 (167)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHH
Confidence 36677888999999999999999997554
No 263
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=80.63 E-value=32 Score=30.91 Aligned_cols=98 Identities=14% Similarity=0.061 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCc--cchHHHHHHHHHhcCCHHHHHHHHHHHHhc---cCCCChhh--H
Q 015370 265 KYVNLVNIYITASHLVNAESSTLVEAEKSITQRQ--WITYDFLIILYAGLGNKDKIDQIWKSLRMT---KQKMTSRN--Y 337 (408)
Q Consensus 265 ~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~--~~~~~~li~~~~~~~~~~~a~~~~~~m~~~---~~~p~~~~--~ 337 (408)
+...+...|.+.|++++|.+ .+.++......+. ...+-.++..+...+++..+...+.+.... +..|+... .
T Consensus 133 ~~~~la~~~~~~Gd~~~A~~-~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk 211 (429)
T 4b4t_R 133 AWINLGEYYAQIGDKDNAEK-TLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYK 211 (429)
T ss_dssp CCHHHHHHHHHHCCCTTHHH-HHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHH-HHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHHH
Confidence 44566667777777777777 6666655433322 334555666666677777777766665432 21222211 0
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhh
Q 015370 338 ICILSSYLMLGHLKEVGEIIDQWKQS 363 (408)
Q Consensus 338 ~~li~~~~~~g~~~~A~~~~~~~~~~ 363 (408)
..-...+...+++.+|-..|-+....
T Consensus 212 ~~~gl~~l~~r~f~~Aa~~f~e~~~t 237 (429)
T 4b4t_R 212 TYYGIHCLAVRNFKEAAKLLVDSLAT 237 (429)
T ss_dssp HHHHHGGGGTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhChHHHHHHHHHHHhcc
Confidence 01112233556777777777665543
No 264
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=79.72 E-value=20 Score=28.14 Aligned_cols=55 Identities=7% Similarity=-0.077 Sum_probs=40.0
Q ss_pred CCHHHHHHHHHHHHhccCCCCh-hhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCC
Q 015370 313 GNKDKIDQIWKSLRMTKQKMTS-RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDF 368 (408)
Q Consensus 313 ~~~~~a~~~~~~m~~~~~~p~~-~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~ 368 (408)
+...+..++|..|...|+.... .-|......+...|++.+|.++|+.-++.+ -.|
T Consensus 93 ~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~GI~~~-A~P 148 (202)
T 3esl_A 93 NNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKVLLELGAENN-CRP 148 (202)
T ss_dssp TCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT-CBS
T ss_pred cccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-Ccc
Confidence 3466888888888888775443 346667777778888888888888887765 355
No 265
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=78.94 E-value=16 Score=26.52 Aligned_cols=46 Identities=13% Similarity=-0.000 Sum_probs=20.7
Q ss_pred HHHHHHHHHHhhCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHh
Q 015370 352 EVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 398 (408)
Q Consensus 352 ~A~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~ 398 (408)
+++.+++++.+.+ ..-....+--|.-|+.+.|++++|.++.+.+++
T Consensus 61 ~GI~LLe~l~~~~-~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~ 106 (134)
T 3o48_A 61 LGVKILTDIYKEA-ESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFE 106 (134)
T ss_dssp HHHHHHHHHHHHC-GGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcC-cchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 4455555544432 111122333344455555555555555555554
No 266
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=78.83 E-value=16 Score=32.89 Aligned_cols=99 Identities=15% Similarity=0.018 Sum_probs=70.4
Q ss_pred chHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCC--hhhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCCHHHHHH--
Q 015370 300 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT--SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNR-- 375 (408)
Q Consensus 300 ~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~--~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~-- 375 (408)
.+...+...|.+.|++++|.+.+.+++..-..+. ...+..+++.+...+++..+...+.+........++....+.
T Consensus 132 ~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk 211 (429)
T 4b4t_R 132 QAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYK 211 (429)
T ss_dssp SCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHHH
Confidence 3667889999999999999999999987644433 335667889999999999999999987643212233322221
Q ss_pred --HHHHHHhcCChHHHHHHHHHHHh
Q 015370 376 --LLGAFSDVGLTEKANEFHMLLLQ 398 (408)
Q Consensus 376 --li~~~~~~g~~~~a~~~~~~m~~ 398 (408)
-...+...+++..|...|-+...
T Consensus 212 ~~~gl~~l~~r~f~~Aa~~f~e~~~ 236 (429)
T 4b4t_R 212 TYYGIHCLAVRNFKEAAKLLVDSLA 236 (429)
T ss_dssp HHHHHGGGGTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhChHHHHHHHHHHHhc
Confidence 12234457899999888877643
No 267
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=77.77 E-value=23 Score=29.40 Aligned_cols=116 Identities=13% Similarity=0.088 Sum_probs=62.1
Q ss_pred HHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccC--ccchHHHHHHHHHhc
Q 015370 235 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR--QWITYDFLIILYAGL 312 (408)
Q Consensus 235 ~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~--~~~~~~~li~~~~~~ 312 (408)
....+.|+++++++....-.+. -|.|...-..++..+|-.|+++.|.+ -++...+..+.. ....|..+|.+
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR~--~P~da~~R~~LfqLLcv~G~w~RA~~-QL~~~a~l~p~~~~~a~~yr~lI~a---- 77 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIKA--SPKDASLRSSFIELLCIDGDFERADE-QLMQSIKLFPEYLPGASQLRHLVKA---- 77 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHT--CTTCHHHHHHHHHHHHHHTCHHHHHH-HHHHHHHHCGGGHHHHHHHHHHHHH----
T ss_pred HHHHhCCCHHHHHHHHHHHHHh--CCcCHHHHHHHHHHHHhcCCHHHHHH-HHHHHHHhCchhhHHHHHHHHHHHH----
Confidence 3455677777777777666653 35566666677777777777777777 666555443321 22234444422
Q ss_pred CCHHHHHHHHHHHHhccCCCC-----hhhHHHHHHHHH--hcCCHHHHHHHHHHHHhh
Q 015370 313 GNKDKIDQIWKSLRMTKQKMT-----SRNYICILSSYL--MLGHLKEVGEIIDQWKQS 363 (408)
Q Consensus 313 ~~~~~a~~~~~~m~~~~~~p~-----~~~~~~li~~~~--~~g~~~~A~~~~~~~~~~ 363 (408)
+..=.++..-+-.|. ..-...++.+.. ..|+.++|.++-.+..+.
T Consensus 78 ------E~~R~~vfaG~~~P~~~g~~~~w~~~ll~Al~~~~~G~~~~A~~lr~~A~e~ 129 (273)
T 1zbp_A 78 ------AQARKDFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEEL 129 (273)
T ss_dssp ------HHHHHHHTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHhc
Confidence 222222222222221 112334555443 347777777777666553
No 268
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=76.10 E-value=13 Score=30.52 Aligned_cols=119 Identities=13% Similarity=0.016 Sum_probs=54.0
Q ss_pred HHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccch--HHHHHHHHHh
Q 015370 234 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWIT--YDFLIILYAG 311 (408)
Q Consensus 234 l~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~--~~~li~~~~~ 311 (408)
+...+..|+.+-+..+++..... -...+....+. +...+..++.....+ +++.+.+.+..++... -...+...+.
T Consensus 152 L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~~g~t~-l~~a~~~~~~~~~~~-i~~~Ll~~g~~~~~~~~~g~t~L~~A~~ 228 (285)
T 1wdy_A 152 LMDAAEKGHVEVLKILLDEMGAD-VNACDNMGRNA-LIHALLSSDDSDVEA-ITHLLLDHGADVNVRGERGKTPLILAVE 228 (285)
T ss_dssp HHHHHHHTCHHHHHHHHHTSCCC-TTCCCTTSCCH-HHHHHHCSCTTTHHH-HHHHHHHTTCCSSCCCTTSCCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHhcCCC-CCccCCCCCCH-HHHHHHccccchHHH-HHHHHHHcCCCCCCcCCCCCcHHHHHHH
Confidence 44445667777666665542211 01111111222 333445555544455 5555666665554321 1123334456
Q ss_pred cCCHHHHHHHHHHHHhccCCCChhhH--HHHHHHHHhcCCHHHHHHHHH
Q 015370 312 LGNKDKIDQIWKSLRMTKQKMTSRNY--ICILSSYLMLGHLKEVGEIID 358 (408)
Q Consensus 312 ~~~~~~a~~~~~~m~~~~~~p~~~~~--~~li~~~~~~g~~~~A~~~~~ 358 (408)
.|+.+-+..+++. .|..++.... ...+...++.|+.+-+.-+++
T Consensus 229 ~~~~~~v~~Ll~~---~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~ 274 (285)
T 1wdy_A 229 KKHLGLVQRLLEQ---EHIEINDTDSDGKTALLLAVELKLKKIAELLCK 274 (285)
T ss_dssp TTCHHHHHHHHHS---SSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHhc---cCCCccccCCCCCcHHHHHHHcCcHHHHHHHHH
Confidence 6776655554431 4444443221 123344455666655444444
No 269
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=76.05 E-value=27 Score=27.50 Aligned_cols=70 Identities=14% Similarity=0.192 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCC-hhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCH
Q 015370 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFN-ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 227 (408)
Q Consensus 157 ~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~-~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~ 227 (408)
...|-..++.+ .++...++..+|..|...|+--. +.-|......+-..|++.+|..+|+.-++.+-.|-.
T Consensus 80 LklWl~Ya~~~-~~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~GI~~~A~P~~ 150 (202)
T 3esl_A 80 LKIWIWYINLF-LSNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKVLLELGAENNCRPYN 150 (202)
T ss_dssp HHHHHHHHHHH-STTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBSHH
T ss_pred HHHHHHHHHhh-cccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCccHH
Confidence 34455555544 24557788888888887765433 345777777888888999999999888888777743
No 270
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=75.66 E-value=20 Score=33.02 Aligned_cols=65 Identities=8% Similarity=0.039 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCC-CCCh--hhHH-HHHHHHHhcCCHHHHHHHHHHHHhC
Q 015370 157 SETYTALLHLYAGAKWTEKAEELFERVKQSNL-SFNA--LMYN-EMMTLYMSVGQVEKVALVVEEIKRK 221 (408)
Q Consensus 157 ~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~-~p~~--~~~~-~li~~~~~~g~~~~a~~~~~~m~~~ 221 (408)
...+|.+++.|...+.++.|..+..+..-... .+|. ..|. -+...+.-.+++.+|.+.+......
T Consensus 231 a~l~nllLRnYL~~~~y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rk 299 (523)
T 4b4t_S 231 AMLINLILRDFLNNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRK 299 (523)
T ss_dssp HHHHHHHHHHHHHSSCSTTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHHccCcHHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 67899999999999999999999998853210 1111 1222 2345566789999999999887764
No 271
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=74.63 E-value=53 Score=30.24 Aligned_cols=66 Identities=12% Similarity=0.210 Sum_probs=47.6
Q ss_pred ChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCC-CCCCH--HHHH-HHHHHHHhcCCHHHHHHHHHHHhcC
Q 015370 191 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKN-VVPDI--FTYN-LWISSCAATLNIDQVKKFLDEMSCD 256 (408)
Q Consensus 191 ~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g-~~p~~--~~~~-~ll~~~~~~g~~~~a~~~~~~~~~~ 256 (408)
....+|.+++.|...+.++.|..+.....--. ..+|. .+|. -+...+.-.+++.+|.+.+......
T Consensus 230 qa~l~nllLRnYL~~~~y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rk 299 (523)
T 4b4t_S 230 KAMLINLILRDFLNNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRK 299 (523)
T ss_dssp HHHHHHHHHHHHHHSSCSTTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSS
T ss_pred hHHHHHHHHHHHHccCcHHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 35679999999999999999999999875210 11222 2232 2345566789999999999988763
No 272
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=74.55 E-value=41 Score=28.95 Aligned_cols=169 Identities=8% Similarity=-0.011 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHhhcChHHHHHHHhcCCCCCCCHHHHHHHHHHHHcCCCHHHHHHH----HHHHHhCCCCCChhhHHHHHH
Q 015370 125 SDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEEL----FERVKQSNLSFNALMYNEMMT 200 (408)
Q Consensus 125 ~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~A~~~----~~~m~~~~~~p~~~~~~~li~ 200 (408)
..|.++..-|.+.+++++|++++-.- ...+.+.|+...|-++ ++-..+.++++|......++.
T Consensus 36 Q~~RTi~~Ry~~~k~y~eAidLL~~G-------------A~~ll~~~Q~~sg~DL~~llvevy~~~~~~~~~~~~~rL~~ 102 (336)
T 3lpz_A 36 QETRLVAARYSKQGNWAAAVDILASV-------------SQTLLRSGQGGSGGDLAVLLVDTFRQAGQRVDGASRGKLLG 102 (336)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHH-------------HHHHHHTTCHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCHHHHHHHHHHH-------------HHHHHHCCCcchHHHHHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence 35566666778888888888865432 1234445665444333 355556677777777777777
Q ss_pred HHHhcCCHH-HHHHHHHHHH----hCC--CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Q 015370 201 LYMSVGQVE-KVALVVEEIK----RKN--VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 273 (408)
Q Consensus 201 ~~~~~g~~~-~a~~~~~~m~----~~g--~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~ 273 (408)
.+.....-+ .=..+.++++ +.| ..-|...-..+...|.+.+++.+|+..|- . |..+++..|..++.-+
T Consensus 103 L~~~~~~~~p~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~ig~~~~~e~~~~~Ae~H~i--l---g~~~s~~~~a~mL~ew 177 (336)
T 3lpz_A 103 CLRLFQPGEPVRKRFVKEMIDWSKKFGDYPAGDPELHHVVGTLYVEEGEFEAAEKHLV--L---GTKESPEVLARMEYEW 177 (336)
T ss_dssp HHTTSCTTCHHHHHHHHHHHHHHHHHSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHT--T---SCTTHHHHHHHHHHHH
T ss_pred HHHhCCCCCcHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHccCCHHHHHHHHH--h---cCCchHHHHHHHHHHH
Confidence 766544311 1122233332 222 23355556667778888888888887762 2 3334445665555444
Q ss_pred HHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 015370 274 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 327 (408)
Q Consensus 274 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~ 327 (408)
.+.+...++-- ++ .-.+-.|...+++..|..+++...+
T Consensus 178 ~~~~~~~e~dl-fi---------------aRaVL~yL~l~n~~~A~~~~~~f~~ 215 (336)
T 3lpz_A 178 YKQDESHTAPL-YC---------------ARAVLPYLLVANVRAANTAYRIFTS 215 (336)
T ss_dssp HHTSCGGGHHH-HH---------------HHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHhcCCccHHH-HH---------------HHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 44433222211 11 1223345567788888777665543
No 273
>3eiq_C Programmed cell death protein 4; PDCD4, anti-oncogene, apoptosis, cell cycle, nucleus, phosph RNA-binding, ATP-binding, helicase, hydrolase; 3.50A {Mus musculus}
Probab=74.42 E-value=27 Score=30.41 Aligned_cols=27 Identities=19% Similarity=0.262 Sum_probs=19.6
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHh
Q 015370 159 TYTALLHLYAGAKWTEKAEELFERVKQ 185 (408)
Q Consensus 159 ~~~~ll~~~~~~~~~~~A~~~~~~m~~ 185 (408)
....+|.-|...++.++|...++++..
T Consensus 56 ~~~~ii~EYf~~~d~~Ea~~~l~eL~~ 82 (358)
T 3eiq_C 56 TLTPIIQEYFEHGDTNEVAEMLRDLNL 82 (358)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHTTTC
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHhCC
Confidence 456677777777888888887777653
No 274
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=73.77 E-value=33 Score=30.56 Aligned_cols=72 Identities=7% Similarity=-0.026 Sum_probs=32.6
Q ss_pred HHHHHHHHHcCCCCChhh--HHHHHHHHHhcccHHHHHHHHHHHHhccCCCCC---hHHHHHHHHHHHhhcChHHHHHHH
Q 015370 73 TNVIQRWVSEGNQATVSE--LRHILKELRKSQRYKHALEISEWMVTHKEFVLS---DSDYATRIDLMTKVFGIHSGERYF 147 (408)
Q Consensus 73 ~~~l~~~~~~g~~~~~~~--~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~---~~~~~~li~~~~~~g~~~~a~~~~ 147 (408)
.++++.+.+.|..++... -.+.+...++.|+.+-+.-++ +.| ..++ .... +.+...+..|+.+.+..++
T Consensus 60 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll----~~g-a~~~~~~~~g~-t~L~~A~~~g~~~~v~~Ll 133 (437)
T 1n11_A 60 TEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLL----ENN-ANPNLATTAGH-TPLHIAAREGHVETVLALL 133 (437)
T ss_dssp HHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHTCHHHHHHHH----HHT-CCTTCCCTTCC-CHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH----hCC-CCCCCCCCCCC-cHHHHHHHcCCHHHHHHHH
Confidence 455555666664443211 112333444556654433333 333 2222 1111 2344455667777766666
Q ss_pred hcC
Q 015370 148 EGL 150 (408)
Q Consensus 148 ~~~ 150 (408)
+.-
T Consensus 134 ~~~ 136 (437)
T 1n11_A 134 EKE 136 (437)
T ss_dssp HTT
T ss_pred hCC
Confidence 653
No 275
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=73.26 E-value=21 Score=28.42 Aligned_cols=14 Identities=14% Similarity=-0.111 Sum_probs=5.8
Q ss_pred HhhcChHHHHHHHh
Q 015370 135 TKVFGIHSGERYFE 148 (408)
Q Consensus 135 ~~~g~~~~a~~~~~ 148 (408)
++.|+.+....+++
T Consensus 17 ~~~g~~~~~~~Ll~ 30 (240)
T 3eu9_A 17 TQYGIYERCRELVE 30 (240)
T ss_dssp HHTTCHHHHHHHHH
T ss_pred HHcCChHHHHHHHH
Confidence 33444444444433
No 276
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E
Probab=73.07 E-value=25 Score=26.63 Aligned_cols=32 Identities=9% Similarity=-0.007 Sum_probs=14.1
Q ss_pred CCChhhHHHHHHHHHhc-ccHHHHHHHHHHHHh
Q 015370 85 QATVSELRHILKELRKS-QRYKHALEISEWMVT 116 (408)
Q Consensus 85 ~~~~~~~~~li~~~~~~-~~~~~a~~~~~~~~~ 116 (408)
..+...+..++..+... .....+..+|..+-.
T Consensus 35 ~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~ 67 (183)
T 1s6c_A 35 VVNEETFKQIYAQFFPHGDASTYAHYLFNAFDT 67 (183)
T ss_dssp EECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCT
T ss_pred cCCHHHHHHHHHHHcCCCChHHHHHHHHHHhCC
Confidence 34555555544444322 223344455555543
No 277
>2uwj_G Type III export protein PSCG; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=71.56 E-value=21 Score=24.35 Aligned_cols=46 Identities=13% Similarity=-0.022 Sum_probs=19.5
Q ss_pred HHhcCCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 015370 344 YLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 396 (408)
Q Consensus 344 ~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m 396 (408)
+...|++++|..+.+. ...||...|-+| +-.+.|..+.+..-+.++
T Consensus 49 LmNrG~Yq~Al~l~~~-----~c~pdlepw~AL--ce~rlGl~s~le~rL~~l 94 (115)
T 2uwj_G 49 LANQGRYQEALAFAHG-----NPWPALEPWFAL--CEWHLGLGAALDRRLAGL 94 (115)
T ss_dssp HHHTTCHHHHHGGGTT-----CCCGGGHHHHHH--HHHHTTCHHHHHHHHHHH
T ss_pred HHcchhHHHHHHhcCC-----CCCchHHHHHHH--HHHhcccHHHHHHHHHHH
Confidence 3444555555544443 123455544332 223444444444444333
No 278
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=71.03 E-value=22 Score=24.32 Aligned_cols=49 Identities=12% Similarity=0.091 Sum_probs=19.9
Q ss_pred HHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q 015370 309 YAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 363 (408)
Q Consensus 309 ~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~ 363 (408)
+...|++++|..+.+.+ ..||...|..|-. .+.|..+++...+.++..+
T Consensus 50 LmNrG~Yq~Al~l~~~~----c~pdlepw~ALce--~rlGl~s~le~rL~~la~s 98 (116)
T 2p58_C 50 LMNRGDYASALQQGNKL----AYPDLEPWLALCE--YRLGLGSALESRLNRLARS 98 (116)
T ss_dssp HHHTTCHHHHHHHHTTS----CCGGGHHHHHHHH--HHHTCHHHHHHHHHHHTTC
T ss_pred HHcchhHHHHHHhcCCC----CCchHHHHHHHHH--HhcccHHHHHHHHHHHHhC
Confidence 33444555554443321 2344443333322 2344444444444444433
No 279
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=70.55 E-value=28 Score=31.06 Aligned_cols=103 Identities=17% Similarity=0.155 Sum_probs=53.1
Q ss_pred HHHHHHHHHcCCCCChhh--HHHHHHHHHhcccHHHHHHHHHHHHhccCCCCCh--HHHHHHHHHHHhhcChHHHHHHHh
Q 015370 73 TNVIQRWVSEGNQATVSE--LRHILKELRKSQRYKHALEISEWMVTHKEFVLSD--SDYATRIDLMTKVFGIHSGERYFE 148 (408)
Q Consensus 73 ~~~l~~~~~~g~~~~~~~--~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~--~~~~~li~~~~~~g~~~~a~~~~~ 148 (408)
.++++.+.+.|..++... ..+.+...+..|+.+-+.-+++ .| ..++. ..-.+.+...+..|+.+-+.-+++
T Consensus 27 ~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~----~g-~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~ 101 (437)
T 1n11_A 27 LPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQ----NK-AKVNAKAKDDQTPLHCAARIGHTNMVKLLLE 101 (437)
T ss_dssp HHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHH----HT-CCSSCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHh----CC-CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHh
Confidence 567777778887665432 2234555667788765555544 33 22221 112234556677888888777777
Q ss_pred cCCCC-CCCHHHHHHHHHHHHcCCCHHHHHHHHH
Q 015370 149 GLPLS-AKTSETYTALLHLYAGAKWTEKAEELFE 181 (408)
Q Consensus 149 ~~~~~-~~~~~~~~~ll~~~~~~~~~~~A~~~~~ 181 (408)
.-... ..+..-++. +...+..|+.+-+..+++
T Consensus 102 ~ga~~~~~~~~g~t~-L~~A~~~g~~~~v~~Ll~ 134 (437)
T 1n11_A 102 NNANPNLATTAGHTP-LHIAAREGHVETVLALLE 134 (437)
T ss_dssp HTCCTTCCCTTCCCH-HHHHHHHTCHHHHHHHHH
T ss_pred CCCCCCCCCCCCCcH-HHHHHHcCCHHHHHHHHh
Confidence 53221 122222222 233345566655544443
No 280
>2zu6_B Programmed cell death protein 4; protein-protein complex, ATP-binding, helicase, hydrolase, initiation factor, nucleotide-binding; 2.80A {Homo sapiens} PDB: 3eij_A
Probab=70.05 E-value=50 Score=28.04 Aligned_cols=64 Identities=22% Similarity=0.269 Sum_probs=34.8
Q ss_pred HHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCC--HHHHHHHHHHHHhccCC
Q 015370 266 YVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN--KDKIDQIWKSLRMTKQK 331 (408)
Q Consensus 266 ~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~--~~~a~~~~~~m~~~~~~ 331 (408)
...++.-|...|+.++|.+ .++++...... .......+..++-+.++ .+.+.+++..+.+.|+-
T Consensus 169 i~~lL~EY~~~~D~~EA~~-ci~EL~~p~f~-~e~V~~ai~~alE~~~~~~re~~~~LL~~L~~~~~l 234 (307)
T 2zu6_B 169 IDMLLKEYLLSGDISEAEH-CLKELEVPHFH-HELVYEAIIMVLESTGESTFKMILDLLKSLWKSSTI 234 (307)
T ss_dssp HHHHHHHHHHHCCHHHHHH-HHHHHCCGGGH-HHHHHHHHHHHHTCCSSHHHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHcCCCHHHHHH-HHHHcCCCcch-HHHHHHHHHHHHccCChHHHHHHHHHHHHHHHCCCC
Confidence 4567777777888888888 66655321111 12233344444444322 34556677776666554
No 281
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=68.88 E-value=9.6 Score=29.57 Aligned_cols=15 Identities=20% Similarity=0.109 Sum_probs=6.7
Q ss_pred HHHHHHHHhccCCCC
Q 015370 319 DQIWKSLRMTKQKMT 333 (408)
Q Consensus 319 ~~~~~~m~~~~~~p~ 333 (408)
.++.+.+.+.|..|+
T Consensus 158 ~~~v~~Ll~~ga~~~ 172 (201)
T 3hra_A 158 QDIVKLLMENGADQS 172 (201)
T ss_dssp HHHHHHHHHTTCCTT
T ss_pred HHHHHHHHHCCCCCC
Confidence 334444444554443
No 282
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=68.38 E-value=38 Score=26.90 Aligned_cols=26 Identities=12% Similarity=0.068 Sum_probs=13.1
Q ss_pred HHHHcCCCHHHHHHHHHHHHhCCCCC
Q 015370 165 HLYAGAKWTEKAEELFERVKQSNLSF 190 (408)
Q Consensus 165 ~~~~~~~~~~~A~~~~~~m~~~~~~p 190 (408)
...++.|+.+.+..+++.+.+.|..+
T Consensus 14 ~~A~~~g~~~~v~~Ll~~~~~~~~~~ 39 (241)
T 1k1a_A 14 HIAVVQGNLPAVHRLVNLFQQGGREL 39 (241)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHTTCCS
T ss_pred HHHHHcCCHHHHHHHHHHHHhcCCCC
Confidence 33444556555555555555444333
No 283
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=65.02 E-value=43 Score=26.54 Aligned_cols=16 Identities=6% Similarity=-0.004 Sum_probs=7.8
Q ss_pred HHHhhcChHHHHHHHh
Q 015370 133 LMTKVFGIHSGERYFE 148 (408)
Q Consensus 133 ~~~~~g~~~~a~~~~~ 148 (408)
..+..|+.+.+..+++
T Consensus 15 ~A~~~g~~~~v~~Ll~ 30 (241)
T 1k1a_A 15 IAVVQGNLPAVHRLVN 30 (241)
T ss_dssp HHHHTTCHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHH
Confidence 3344555555554444
No 284
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=64.93 E-value=41 Score=25.09 Aligned_cols=49 Identities=16% Similarity=0.174 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHhccCCCCh-hhHHHHHHHHHhcCCHHHHHHHHHHHHhhC
Q 015370 316 DKIDQIWKSLRMTKQKMTS-RNYICILSSYLMLGHLKEVGEIIDQWKQSA 364 (408)
Q Consensus 316 ~~a~~~~~~m~~~~~~p~~-~~~~~li~~~~~~g~~~~A~~~~~~~~~~~ 364 (408)
++..++|..|...|+.... .-|......+...|++.+|.++|+.-++.+
T Consensus 82 ~dp~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~ 131 (152)
T 4a1g_A 82 SDLHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQ 131 (152)
T ss_dssp SCHHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 3466666666666664332 234555556666677777777777666654
No 285
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}
Probab=64.29 E-value=49 Score=26.95 Aligned_cols=111 Identities=14% Similarity=0.197 Sum_probs=52.2
Q ss_pred HHHHHHHhcCCCCC---CCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCC-CCCChhhHHHHHHHHH-hcC---------
Q 015370 141 HSGERYFEGLPLSA---KTSETYTALLHLYAGAKWTEKAEELFERVKQSN-LSFNALMYNEMMTLYM-SVG--------- 206 (408)
Q Consensus 141 ~~a~~~~~~~~~~~---~~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~-~~p~~~~~~~li~~~~-~~g--------- 206 (408)
..+..+|..+...+ .+..-|..++..+......++...+|+.+-..| -..+..-+..++..+. ..|
T Consensus 129 ~~~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~~~~g~~~~~~~~~ 208 (256)
T 2jul_A 129 TYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILRE 208 (256)
T ss_dssp HHHHHHHHHSSCSCCSEECSHHHHHHHHHHHSCCHHHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHHCCCCCSCCSCC
T ss_pred HHHHHHHHHhccCCCCcCcHHHHHHHHHHHhccChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCCcccch
Confidence 44566666665543 233334444444443333445555665543221 1122333333333221 113
Q ss_pred --CHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 015370 207 --QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253 (408)
Q Consensus 207 --~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~ 253 (408)
.-+.+..+|+.+-..| -...+|.-++..+.+...+-++...|+.+
T Consensus 209 ~~~~~~~~~~f~~~D~d~--dG~Is~~Ef~~~~~~~~~l~~~l~~~d~~ 255 (256)
T 2jul_A 209 DAPLEHVERFFQKMDRNQ--DGVVTIDEFLETCQKDENIMNSMQLFENV 255 (256)
T ss_dssp CCHHHHHHHHHHHSCCST--TCSBCHHHHHHHHHHCSSHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHCCCC--CCcEeHHHHHHHHHhCHHHHHHHHhhccc
Confidence 2345555555553322 12345666666666777777777766654
No 286
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=63.82 E-value=36 Score=25.75 Aligned_cols=54 Identities=11% Similarity=0.097 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHhccCCCCh-hhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCCH
Q 015370 316 DKIDQIWKSLRMTKQKMTS-RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDI 370 (408)
Q Consensus 316 ~~a~~~~~~m~~~~~~p~~-~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~~~ 370 (408)
+...++|..|...|+.... ..|......+-..|++.+|.++|+.-++.+ -.|-.
T Consensus 77 ~~p~~if~~L~~~~IG~~~AlfY~~wA~~lE~~~~~~~A~~Iy~~Gi~~~-A~P~~ 131 (164)
T 2wvi_A 77 NEPLDMYSYLHNQGIGVSLAQFYISWAEEYEARENFRKADAIFQEGIQQK-AEPLE 131 (164)
T ss_dssp SCHHHHHHHHHHTTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT-CBSHH
T ss_pred CCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-CCcHH
Confidence 4467788888888775543 345666777778888888888888888765 45543
No 287
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=62.60 E-value=65 Score=26.64 Aligned_cols=199 Identities=7% Similarity=-0.071 Sum_probs=90.8
Q ss_pred hhcChHHHHHHHhcCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHH
Q 015370 136 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 215 (408)
Q Consensus 136 ~~g~~~~a~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~ 215 (408)
+..+.++..+++..-.....|..-++.|. ..+..|+.+-+..++ +.|..++...-.+.+...+..|+.+-+.
T Consensus 8 ~~~~~~~v~~lL~~~~~~~~d~~g~t~L~-~A~~~g~~~~v~~Ll----~~g~~~~~~~g~t~L~~A~~~g~~~~v~--- 79 (285)
T 3kea_A 8 NTWKSKQLKSFLSSKDTFKADVHGHSASY-YAIADNNVRLVCTLL----NAGALKNLLENEFPLHQAATLEDTKIVK--- 79 (285)
T ss_dssp GGCCHHHHHHHHHSTTTTCCCTTSCCHHH-HHHHTTCHHHHHHHH----HTTGGGSCCTTCCHHHHHTTSSSCHHHH---
T ss_pred HhcCHHHHHHHHHhCCCCccCCCCCCHHH-HHHHcCCHHHHHHHH----hCCCCCCCCCCCCHHHHHHHcCCHHHHH---
Confidence 34566677777765422234444444443 345567776544444 4443333322223344445666655443
Q ss_pred HHHHhCCCCCCH---HHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHH
Q 015370 216 EEIKRKNVVPDI---FTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 292 (408)
Q Consensus 216 ~~m~~~g~~p~~---~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~ 292 (408)
.+.+.|..++. .-.+. +...+..|+.+-+..+++.-.. .. ..+...+.+.+...+..|+.+-+.. +.+
T Consensus 80 -~Ll~~ga~~~~~d~~g~t~-L~~A~~~g~~~~v~~Ll~~ga~-~~-~~~~~g~~t~L~~A~~~~~~~~v~~-----Ll~ 150 (285)
T 3kea_A 80 -ILLFSGLDDSQFDDKGNTA-LYYAVDSGNMQTVKLFVKKNWR-LM-FYGKTGWKTSFYHAVMLNDVSIVSY-----FLS 150 (285)
T ss_dssp -HHHHTTCCTTCCCTTSCCH-HHHHHHTTCHHHHHHHHHHCGG-GG-GCSSSGGGSHHHHHHHTTCHHHHHH-----HHT
T ss_pred -HHHHCCCCCCCcCCCCCcH-HHHHHHcCCHHHHHHHHhcCCC-CC-ccCCCCCCCHHHHHHHcCCHHHHHH-----HHh
Confidence 34445654432 22222 3344566777766555554111 00 1111112344555566666654444 333
Q ss_pred hcccC-ccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCChh---hHHHHHHHHHhcCCHHHHHH
Q 015370 293 SITQR-QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR---NYICILSSYLMLGHLKEVGE 355 (408)
Q Consensus 293 ~~~~~-~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~---~~~~li~~~~~~g~~~~A~~ 355 (408)
.+..+ +...-...+...+..|+.+-+..+++. |..++.. -.+..+...+..|+.+-+.-
T Consensus 151 ~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~----gad~n~~~~~g~t~~L~~A~~~~~~~~v~~ 213 (285)
T 3kea_A 151 EIPSTFDLAILLSCIHITIKNGHVDMMILLLDY----MTSTNTNNSLLFIPDIKLAIDNKDIEMLQA 213 (285)
T ss_dssp TSCTTCCCSTHHHHHHHHHHTTCHHHHHHHHHH----HHHTCTTCCCBCCTTHHHHHHHTCHHHHHH
T ss_pred CCCccccccCCccHHHHHHHcChHHHHHHHHHc----CCCCCcccCCCCChHHHHHHHcCCHHHHHH
Confidence 33333 221223344444566777666555543 3333322 22333444455666544433
No 288
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=59.62 E-value=47 Score=26.59 Aligned_cols=53 Identities=13% Similarity=0.073 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHhccCCCCh-hhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCC
Q 015370 315 KDKIDQIWKSLRMTKQKMTS-RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDF 368 (408)
Q Consensus 315 ~~~a~~~~~~m~~~~~~p~~-~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~ 368 (408)
.+...++|..|...|+.... .-|......+...|++.+|..+|+.-++.+ -.|
T Consensus 130 ~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~-A~P 183 (223)
T 4aez_C 130 IDEPVELFSFLAHHHIGQESSIFYEEYANYFESRGLFQKADEVYQKGKRMK-AKP 183 (223)
T ss_dssp CSCHHHHHHHHHHTTCSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT-CBS
T ss_pred cCCHHHHHHHHHHCCcchhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-Ccc
Confidence 35677788888887775433 345666777778888888888888877765 345
No 289
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=59.56 E-value=81 Score=26.71 Aligned_cols=151 Identities=11% Similarity=0.048 Sum_probs=66.8
Q ss_pred HHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccc---hHHHHHHHHHh
Q 015370 235 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI---TYDFLIILYAG 311 (408)
Q Consensus 235 ~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~---~~~~li~~~~~ 311 (408)
...+..|+.+-+..++++...... ..+....+.+..+.... ....... +.+.+.+.+..++.. -.+ .+...+.
T Consensus 173 ~~A~~~g~~~~v~~LL~~~gad~n-~~d~~g~t~l~~~~~~~-~~~~~~~-i~~lLl~~gad~n~~d~~g~t-~L~~a~~ 248 (337)
T 4g8k_A 173 MDAAEKGHVEVLKILLDEMGADVN-ACDNMGRNALIHALLSS-DDSDVEA-ITHLLLDHGADVNVRGERGKT-PLILAVE 248 (337)
T ss_dssp HHHHHHTCHHHHHHHHHHSCCCTT-CCCTTSCCHHHHHHHHS-CTTTHHH-HHHHHHHTTCCTTCCCGGGCC-HHHHHHH
T ss_pred HHHHHCCCHHHHHHHHhccCCCcC-ccCCCCCcHHHHHHHHc-CcccHHH-HHHHHHHCCCCCCCcCCCCCC-HHHHHHH
Confidence 334566888766666654221100 11111122333332222 2222222 333344555444332 222 2334456
Q ss_pred cCCHHHHHHHHHHHHhccCCCChh---hHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHhcCChHH
Q 015370 312 LGNKDKIDQIWKSLRMTKQKMTSR---NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEK 388 (408)
Q Consensus 312 ~~~~~~a~~~~~~m~~~~~~p~~~---~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~ 388 (408)
.|..+.+..++. ..|..++.. -.+.| ...++.|+.+-+.-++ +.| ..+|..+ .|. .-++.|+.
T Consensus 249 ~~~~~~v~~Ll~---~~~~~vn~~d~~G~TpL-~~A~~~g~~~iv~~Ll----~~G-Ad~n~~~--~L~-~A~~~~~~-- 314 (337)
T 4g8k_A 249 KKHLGLVQRLLE---QEHIEINDTDSDGKTAL-LLAVELKLKKIAELLC----KRG-ASTDCGD--LVM-TARRNYDH-- 314 (337)
T ss_dssp TTCHHHHHHHHT---STTCCTTCBCTTSCBHH-HHHHHTTCHHHHHHHH----TTS-CSSTTCC--HHH-HHHHTTCH--
T ss_pred hhhhHHHHHHHH---hcCCcccCcCCCCCCHH-HHHHHcCCHHHHHHHH----HCC-CCCCCCC--HHH-HHHHcCCH--
Confidence 777776665543 223333322 22233 3335667766554443 444 3455432 233 33455654
Q ss_pred HHHHHHHHHhcCCCCCC
Q 015370 389 ANEFHMLLLQKNCAPTN 405 (408)
Q Consensus 389 a~~~~~~m~~~g~~p~~ 405 (408)
++++.+++.|-.||.
T Consensus 315 --~iv~~Ll~~GA~~d~ 329 (337)
T 4g8k_A 315 --SLVKVLLSHGAKEDF 329 (337)
T ss_dssp --HHHHHHHHTTCCC--
T ss_pred --HHHHHHHHCcCCCCC
Confidence 456677888877764
No 290
>2d2s_A Exocyst complex component EXO84; tethering complex, EXO84P, endocytosis/exocytosis complex; 2.85A {Saccharomyces cerevisiae} SCOP: a.118.17.2
Probab=57.73 E-value=63 Score=26.14 Aligned_cols=88 Identities=13% Similarity=0.054 Sum_probs=42.8
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHhC--CCCC----ChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHH
Q 015370 163 LLHLYAGAKWTEKAEELFERVKQS--NLSF----NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 236 (408)
Q Consensus 163 ll~~~~~~~~~~~A~~~~~~m~~~--~~~p----~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~ 236 (408)
-++.+....++++|..++++..+. ++++ +...-...+..-.....-.-+..+.+++.. .++.......+..
T Consensus 24 eLDv~IA~r~feeAv~lle~~~~~l~~~~~~~~~~~~~~~~~l~~ki~eR~~~L~~~L~~~l~~---~~~~~~~r~~v~~ 100 (235)
T 2d2s_A 24 EIDIELARLRFESAVETLLDIESQLEDLSERISDEELMLLNLISLKIEQRREAISSKLSQSILS---SNEIVHLKSGTEN 100 (235)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHT---CSSHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHhCcccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCHHHHHHHHHH
Confidence 355666677777777777655431 1111 011122223322333333334444444422 3344555555666
Q ss_pred HHhcCCHHHHHHHHHHH
Q 015370 237 CAATLNIDQVKKFLDEM 253 (408)
Q Consensus 237 ~~~~g~~~~a~~~~~~~ 253 (408)
+.+.|+.++|.++|=+.
T Consensus 101 L~rLg~~~~A~~lfL~~ 117 (235)
T 2d2s_A 101 MIKLGLPEQALDLFLQN 117 (235)
T ss_dssp HHHTTCHHHHHHHHHHH
T ss_pred HHHCCChhHHHHHHHHH
Confidence 67777777777666443
No 291
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=57.25 E-value=94 Score=26.74 Aligned_cols=22 Identities=9% Similarity=0.354 Sum_probs=13.8
Q ss_pred HHHHHhcCCHHHHHHHHHHHHh
Q 015370 341 LSSYLMLGHLKEVGEIIDQWKQ 362 (408)
Q Consensus 341 i~~~~~~g~~~~A~~~~~~~~~ 362 (408)
+--|.-.++...|..+++...+
T Consensus 194 VL~yL~l~n~~~A~~~~~~f~~ 215 (336)
T 3lpz_A 194 VLPYLLVANVRAANTAYRIFTS 215 (336)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHH
Confidence 3345556778888777666553
No 292
>2nsz_A Programmed cell death protein 4; PDCD4, tumor suppressor, translation, antitumor protein; 1.15A {Mus musculus} SCOP: a.118.1.14 PDB: 2kzt_B 2hm8_A 2ggf_A
Probab=57.05 E-value=42 Score=24.14 Aligned_cols=64 Identities=14% Similarity=0.282 Sum_probs=33.1
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCC--HHHHHHHHHHHHhCCCC
Q 015370 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ--VEKVALVVEEIKRKNVV 224 (408)
Q Consensus 160 ~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~--~~~a~~~~~~m~~~g~~ 224 (408)
.+.++.-|...|+.++|.+.++++...... ...+...+..++-+.++ .+.+..++..+...|+-
T Consensus 10 i~~ll~EY~~~~D~~Ea~~cl~eL~~p~f~-~e~V~~~i~~alE~~~~~~~e~~~~LL~~L~~~~~i 75 (129)
T 2nsz_A 10 IDMLLKEYLLSGDISEAEHCLKELEVPHFH-HELVYEAIVMVLESTGESAFKMILDLLKSLWKSSTI 75 (129)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHTCGGGH-HHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHhCCCccH-HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHCCCc
Confidence 345666666667777777777766532111 12233333344443322 34566666666665544
No 293
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=56.69 E-value=43 Score=27.79 Aligned_cols=17 Identities=0% Similarity=-0.220 Sum_probs=7.7
Q ss_pred HHHHhhcChHHHHHHHh
Q 015370 132 DLMTKVFGIHSGERYFE 148 (408)
Q Consensus 132 ~~~~~~g~~~~a~~~~~ 148 (408)
...+..|+.+-+..+++
T Consensus 67 ~~A~~~g~~~~v~~Ll~ 83 (285)
T 3kea_A 67 HQAATLEDTKIVKILLF 83 (285)
T ss_dssp HHHTTSSSCHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHH
Confidence 33344455544444444
No 294
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=56.63 E-value=59 Score=24.22 Aligned_cols=51 Identities=12% Similarity=0.198 Sum_probs=33.2
Q ss_pred HHHHHHHHHhCCCCCC-hhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCC
Q 015370 176 AEELFERVKQSNLSFN-ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPD 226 (408)
Q Consensus 176 A~~~~~~m~~~~~~p~-~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~ 226 (408)
+..+|..|...|+--. +.-|......+-..|++.+|.++|+.-++.+-.|-
T Consensus 84 p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~P~ 135 (152)
T 4a1g_A 84 LHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQAEPR 135 (152)
T ss_dssp HHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBSH
T ss_pred HHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCccH
Confidence 6777777776664332 33456666666677777777777777776666653
No 295
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=56.03 E-value=95 Score=26.41 Aligned_cols=128 Identities=13% Similarity=0.039 Sum_probs=62.6
Q ss_pred HHHHHhCCCCCCHHHHHHHHHHHHhcCC-----HHHHHHHHHHHhcCCC-CCCCHHHHHHHHHHHHHcCchhhhHHHHHH
Q 015370 215 VEEIKRKNVVPDIFTYNLWISSCAATLN-----IDQVKKFLDEMSCDSG-GSDDWVKYVNLVNIYITASHLVNAESSTLV 288 (408)
Q Consensus 215 ~~~m~~~g~~p~~~~~~~ll~~~~~~g~-----~~~a~~~~~~~~~~~~-~~~~~~~~~~li~~~~~~~~~~~a~~~~~~ 288 (408)
++...+.+++++.....-++..+..... ..-..+..++-.+..+ -.-++.....+...|.+.+++.+|.. .+-
T Consensus 80 vev~~~~~~~~~~~~~~rl~~l~~~~p~~~~~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~~a~~~~~e~~~~~A~~-H~i 158 (312)
T 2wpv_A 80 LEVYDLAEVKVDDISVARLVRLIAELDPSEPNLKDVITGMNNWSIKFSEYKFGDPYLHNTIGSKLLEGDFVYEAER-YFM 158 (312)
T ss_dssp HHHHHHTTCCCSHHHHHHHHHHHTTCCTTCTTHHHHHHHHHHHHHHTSSCTTCCHHHHHHHHHHHHHTTCHHHHHH-HHH
T ss_pred HHHHHHcCCCCCHHHHHHHHHHHHHCCCCCchHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhcCCHHHHHH-HHH
Confidence 3444445555565555555555443221 1112222333322111 22466778888899999999988887 332
Q ss_pred HHHHhcccCccchHHHHHHHHHhc---CCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 015370 289 EAEKSITQRQWITYDFLIILYAGL---GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ 362 (408)
Q Consensus 289 ~~~~~~~~~~~~~~~~li~~~~~~---~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~ 362 (408)
.+...+...+..++.-+... |...++--+. ...+-.|.-.|+...|..+|+...+
T Consensus 159 ----~~~~~s~~~~a~~l~~w~~~~~~~~~~e~dlf~---------------~RaVL~yL~l~n~~~A~~~~~~f~~ 216 (312)
T 2wpv_A 159 ----LGTHDSMIKYVDLLWDWLCQVDDIEDSTVAEFF---------------SRLVFNYLFISNISFAHESKDIFLE 216 (312)
T ss_dssp ----TSCHHHHHHHHHHHHHHHHHTTCCCHHHHHHHH---------------HHHHHHHHHTTBHHHHHHHHHHHHH
T ss_pred ----hCCCccHHHHHHHHHHHHHhcCCCCcchHHHHH---------------HHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 11111233444443333332 3332221111 1123334456888888888887653
No 296
>2zu6_B Programmed cell death protein 4; protein-protein complex, ATP-binding, helicase, hydrolase, initiation factor, nucleotide-binding; 2.80A {Homo sapiens} PDB: 3eij_A
Probab=56.00 E-value=94 Score=26.36 Aligned_cols=26 Identities=15% Similarity=0.240 Sum_probs=19.0
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHh
Q 015370 160 YTALLHLYAGAKWTEKAEELFERVKQ 185 (408)
Q Consensus 160 ~~~ll~~~~~~~~~~~A~~~~~~m~~ 185 (408)
...++.-|...|+.++|...++++..
T Consensus 6 ~~~ii~EYf~~~d~~Ea~~~l~el~~ 31 (307)
T 2zu6_B 6 LTPIIQEYFEHGDTNEVAEMLRDLNL 31 (307)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHhCC
Confidence 45677777778888888888777643
No 297
>2d2s_A Exocyst complex component EXO84; tethering complex, EXO84P, endocytosis/exocytosis complex; 2.85A {Saccharomyces cerevisiae} SCOP: a.118.17.2
Probab=54.63 E-value=51 Score=26.69 Aligned_cols=24 Identities=13% Similarity=0.018 Sum_probs=19.3
Q ss_pred HHHHHHHhcccHHHHHHHHHHHHh
Q 015370 93 HILKELRKSQRYKHALEISEWMVT 116 (408)
Q Consensus 93 ~li~~~~~~~~~~~a~~~~~~~~~ 116 (408)
--++.+....++++|++++++..+
T Consensus 23 deLDv~IA~r~feeAv~lle~~~~ 46 (235)
T 2d2s_A 23 EEIDIELARLRFESAVETLLDIES 46 (235)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHH
Confidence 356678888999999999987765
No 298
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=54.33 E-value=1.5e+02 Score=28.14 Aligned_cols=97 Identities=8% Similarity=-0.073 Sum_probs=48.3
Q ss_pred HHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCC---CCCHHHHHHHHHHHHh
Q 015370 306 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATS---DFDISACNRLLGAFSD 382 (408)
Q Consensus 306 i~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~---~~~~~~~~~li~~~~~ 382 (408)
+..+...|....|...|..+... .+......+.......|..+.+..........+.. -|. .|..++....+
T Consensus 388 ~~~L~~~g~~~~a~~ew~~~~~~---~~~~~~~~la~~a~~~~~~~~~v~~~~~~~~~~~~~~~~P~--~y~~~i~~~a~ 462 (618)
T 1qsa_A 388 VRELMYWNLDNTARSEWANLVKS---KSKTEQAQLARYAFNNQWWDLSVQATIAGKLWDHLEERFPL--AYNDLFKRYTS 462 (618)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTT---CCHHHHHHHHHHHHHTTCHHHHHHHHHHTTCTTCHHHHSCC--TTHHHHHHHHT
T ss_pred HHHHHHCCChhhHHHHHHHHHhc---CCHHHHHHHHHHHHHCCChHHHHHHHHHHHhhcchhhhCCc--chHHHHHHHHH
Confidence 34456677777777777765543 22233334444445667777666554432211100 011 24445555555
Q ss_pred cCChHHHHHHHHHHHhcCCCCCCCC
Q 015370 383 VGLTEKANEFHMLLLQKNCAPTNAS 407 (408)
Q Consensus 383 ~g~~~~a~~~~~~m~~~g~~p~~~t 407 (408)
.-.++..+-.---..|.++.|+.++
T Consensus 463 ~~gv~~~ll~Ai~~~ES~f~p~a~S 487 (618)
T 1qsa_A 463 GKEIPQSYAMAIARQESAWNPKVKS 487 (618)
T ss_dssp TSSSCHHHHHHHHHHHHTTCTTCBC
T ss_pred HcCCCHHHHHHHHHHhCCCCCCCcC
Confidence 4445544433334456677776543
No 299
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=50.96 E-value=27 Score=27.71 Aligned_cols=17 Identities=6% Similarity=-0.068 Sum_probs=7.7
Q ss_pred HHHHhhcChHHHHHHHh
Q 015370 132 DLMTKVFGIHSGERYFE 148 (408)
Q Consensus 132 ~~~~~~g~~~~a~~~~~ 148 (408)
...+..|+.+-+..+++
T Consensus 81 ~~A~~~~~~~~v~~Ll~ 97 (240)
T 3eu9_A 81 HWATRQGHLSMVVQLMK 97 (240)
T ss_dssp HHHHHHTCHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHH
Confidence 33344455554444443
No 300
>2ion_A PDCD4, programmed cell death 4, PDCD4; alpha-helical, antitumor protein; 1.57A {Mus musculus} SCOP: a.118.1.14 PDB: 2ios_A 2iol_A
Probab=50.12 E-value=34 Score=25.54 Aligned_cols=64 Identities=14% Similarity=0.282 Sum_probs=32.6
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCC--HHHHHHHHHHHHhCCCC
Q 015370 160 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ--VEKVALVVEEIKRKNVV 224 (408)
Q Consensus 160 ~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~--~~~a~~~~~~m~~~g~~ 224 (408)
.+.++.-|...|+.++|.+.++++...... ...+...+..++-+.++ .+.+..++..+...|+-
T Consensus 12 i~~lL~EY~~~~D~~EA~~cl~EL~~p~f~-~e~V~~~i~~alE~~~~~~re~~~~LL~~L~~~~~i 77 (152)
T 2ion_A 12 IDMLLKEYLLSGDISEAEHCLKELEVPHFH-HELVYEAIVMVLESTGESAFKMILDLLKSLWKSSTI 77 (152)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHTCGGGH-HHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHhCCCcch-HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHCCCc
Confidence 445666666667777777777666432111 12233333334433222 34556666666655544
No 301
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=50.00 E-value=96 Score=24.80 Aligned_cols=53 Identities=23% Similarity=0.355 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHhCCCCCC-hhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCC
Q 015370 174 EKAEELFERVKQSNLSFN-ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPD 226 (408)
Q Consensus 174 ~~A~~~~~~m~~~~~~p~-~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~ 226 (408)
+++..+|..|...|+--. +.-|......+-..|++.+|..+|+.-++.+-.|-
T Consensus 131 ~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~P~ 184 (223)
T 4aez_C 131 DEPVELFSFLAHHHIGQESSIFYEEYANYFESRGLFQKADEVYQKGKRMKAKPF 184 (223)
T ss_dssp SCHHHHHHHHHHTTCSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCBSH
T ss_pred CCHHHHHHHHHHCCcchhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCccH
Confidence 467778888887775433 34567777777788888888888888887776664
No 302
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=49.79 E-value=81 Score=23.82 Aligned_cols=52 Identities=12% Similarity=0.190 Sum_probs=36.6
Q ss_pred HHHHHHHHHhCCCCCC-hhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCH
Q 015370 176 AEELFERVKQSNLSFN-ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 227 (408)
Q Consensus 176 A~~~~~~m~~~~~~p~-~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~ 227 (408)
+..+|..|...|+--. +.-|......+-..|++.+|.++|+.-++.+-.|-.
T Consensus 79 p~~if~~L~~~~IG~~~AlfY~~wA~~lE~~~~~~~A~~Iy~~Gi~~~A~P~~ 131 (164)
T 2wvi_A 79 PLDMYSYLHNQGIGVSLAQFYISWAEEYEARENFRKADAIFQEGIQQKAEPLE 131 (164)
T ss_dssp HHHHHHHHHHTTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBSHH
T ss_pred HHHHHHHHHHCCcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHH
Confidence 6677888877765433 335666667777778888888888888777766654
No 303
>2fe3_A Peroxide operon regulator; oxidative stress regulator, DNA binding protein; 1.75A {Bacillus subtilis} PDB: 3f8n_A 2rgv_A*
Probab=47.15 E-value=77 Score=23.18 Aligned_cols=64 Identities=14% Similarity=0.026 Sum_probs=45.0
Q ss_pred HHHHHHHcCCCCChhhHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcCh
Q 015370 75 VIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGI 140 (408)
Q Consensus 75 ~l~~~~~~g~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~ 140 (408)
+.+.+.+.|.+++..-. .++..+...+..-.|.++++.+.+.+ ...+..|.-.-++.+...|-+
T Consensus 9 ~~~~l~~~g~r~T~qR~-~Il~~L~~~~~~~sa~ei~~~l~~~~-~~is~aTVYR~L~~L~e~Glv 72 (145)
T 2fe3_A 9 ALETLKETGVRITPQRH-AILEYLVNSMAHPTADDIYKALEGKF-PNMSVATVYNNLRVFRESGLV 72 (145)
T ss_dssp HHHHHHHTTCCCCHHHH-HHHHHHHHCSSCCCHHHHHHHHGGGC-TTCCHHHHHHHHHHHHHTTSE
T ss_pred HHHHHHHcCCCCCHHHH-HHHHHHHhCCCCCCHHHHHHHHHHhC-CCCChhhHHHHHHHHHHCCCE
Confidence 34456778888777654 45666666667778999999998876 455666666667777777754
No 304
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}
Probab=46.80 E-value=66 Score=26.14 Aligned_cols=151 Identities=9% Similarity=0.087 Sum_probs=89.2
Q ss_pred cCCCCcHHHHHHHHHHc--CCCCChhhHHHHHHHHHhcc-cHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHH
Q 015370 66 SLPKRSATNVIQRWVSE--GNQATVSELRHILKELRKSQ-RYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHS 142 (408)
Q Consensus 66 ~~~~~~a~~~l~~~~~~--g~~~~~~~~~~li~~~~~~~-~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~ 142 (408)
.........+++.+... ....+...+..++..+...+ ....+..+|..+-..+.-..+..-+..++..+......++
T Consensus 87 ~~s~~ei~~l~~~fd~~~~~G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~~ 166 (256)
T 2jul_A 87 KFTKKELQSLYRGFKNECPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEK 166 (256)
T ss_dssp TSCHHHHHHHHHHHHHHCTTSSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHSSCSCCSEECSHHHHHHHHHHHSCCHHHH
T ss_pred CCCHHHHHHHHHHHHhhCCCCcCCHHHHHHHHHHHcccCCcHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHhccChHHH
Confidence 34445566666666553 34567777777776664332 3345667777775543223444445555544443334566
Q ss_pred HHHHHhcCCCCC---CCHHHHHHHHHHHH-cCC-----------CHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCC
Q 015370 143 GERYFEGLPLSA---KTSETYTALLHLYA-GAK-----------WTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 207 (408)
Q Consensus 143 a~~~~~~~~~~~---~~~~~~~~ll~~~~-~~~-----------~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~ 207 (408)
...+|+.+-..+ .+..-+..++..+. ..| .-+++..+|..+-..| -...+|.-++..+.+...
T Consensus 167 l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~--dG~Is~~Ef~~~~~~~~~ 244 (256)
T 2jul_A 167 LKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQ--DGVVTIDEFLETCQKDEN 244 (256)
T ss_dssp HHHHHHHTCCSSSSCBCHHHHHHHHHHHHHHCCCCCSCCSCCCCHHHHHHHHHHHSCCST--TCSBCHHHHHHHHHHCSS
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCCcccchhhHHHHHHHHHHHHCCCC--CCcEeHHHHHHHHHhCHH
Confidence 677787776543 34444444444332 113 2355667777664433 124688999999999999
Q ss_pred HHHHHHHHHHH
Q 015370 208 VEKVALVVEEI 218 (408)
Q Consensus 208 ~~~a~~~~~~m 218 (408)
+-+++..|+.+
T Consensus 245 l~~~l~~~d~~ 255 (256)
T 2jul_A 245 IMNSMQLFENV 255 (256)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHhhccc
Confidence 99998888765
No 305
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5
Probab=46.63 E-value=1.1e+02 Score=24.25 Aligned_cols=10 Identities=10% Similarity=0.428 Sum_probs=4.8
Q ss_pred HHHHHHHHHH
Q 015370 209 EKVALVVEEI 218 (408)
Q Consensus 209 ~~a~~~~~~m 218 (408)
+.+..+|+.+
T Consensus 173 ~~~~~~f~~~ 182 (224)
T 1s1e_A 173 QHVDVFFQKM 182 (224)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 3444555544
No 306
>1ug3_A EIF4GI, eukaryotic protein synthesis initiation factor 4G; heat repeat, translation; 2.24A {Homo sapiens} SCOP: a.118.1.14 a.118.1.14
Probab=46.49 E-value=48 Score=28.62 Aligned_cols=61 Identities=7% Similarity=-0.007 Sum_probs=32.4
Q ss_pred HHHHHHHHHhhcChHHHHHHHhcCCCCC-CCHHHHHHHHHHHHcCC-CHHHHHHHHHHHHhCC
Q 015370 127 YATRIDLMTKVFGIHSGERYFEGLPLSA-KTSETYTALLHLYAGAK-WTEKAEELFERVKQSN 187 (408)
Q Consensus 127 ~~~li~~~~~~g~~~~a~~~~~~~~~~~-~~~~~~~~ll~~~~~~~-~~~~A~~~~~~m~~~~ 187 (408)
...++.=|...|+.++|.+.++++.... ....+...+..++-+.. .-+.+..++..+.+.|
T Consensus 14 ~~~ll~Ey~~~~d~~Ea~~ci~el~~p~~~~~~v~~~i~~~le~~~~~re~~~~Ll~~L~~~~ 76 (339)
T 1ug3_A 14 SKAIIEEYLHLNDMKEAVQCVQELASPSLLFIFVRHGVESTLERSAIAREHMGQLLHQLLCAG 76 (339)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHTTCCGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHcCCcccHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHCC
Confidence 3556777777788888888888886421 11222333333332221 2334455556665554
No 307
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=45.62 E-value=97 Score=23.51 Aligned_cols=17 Identities=0% Similarity=-0.070 Sum_probs=9.7
Q ss_pred HHhhcChHHHHHHHhcC
Q 015370 134 MTKVFGIHSGERYFEGL 150 (408)
Q Consensus 134 ~~~~g~~~~a~~~~~~~ 150 (408)
.+..|+.+....++..-
T Consensus 12 A~~~g~~~~v~~ll~~~ 28 (201)
T 3hra_A 12 AANQRDTKKVKEILQDT 28 (201)
T ss_dssp HHHTTCHHHHHHHHTCT
T ss_pred HHHhccHHHHHHHHHcC
Confidence 34556666666666543
No 308
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=45.47 E-value=58 Score=28.01 Aligned_cols=46 Identities=7% Similarity=-0.044 Sum_probs=24.8
Q ss_pred HhcCCHHHHHHHHHHHHhccCCCChhhH--HHHHHHHHhcCCHHHHHHHHHH
Q 015370 310 AGLGNKDKIDQIWKSLRMTKQKMTSRNY--ICILSSYLMLGHLKEVGEIIDQ 359 (408)
Q Consensus 310 ~~~~~~~~a~~~~~~m~~~~~~p~~~~~--~~li~~~~~~g~~~~A~~~~~~ 359 (408)
+..|+.+-+.. +.+.|..++.... ..-+...+..|+.+-+..+++.
T Consensus 219 ~~~g~~~~v~~----Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ 266 (364)
T 3ljn_A 219 ILINWEDVAMR----FVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQK 266 (364)
T ss_dssp HTTTCHHHHHH----HHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHH
T ss_pred HHcCCHHHHHH----HHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHc
Confidence 45666554433 3455665543321 1234444566887777777765
No 309
>2fe3_A Peroxide operon regulator; oxidative stress regulator, DNA binding protein; 1.75A {Bacillus subtilis} PDB: 3f8n_A 2rgv_A*
Probab=45.14 E-value=85 Score=22.96 Aligned_cols=60 Identities=5% Similarity=-0.006 Sum_probs=25.6
Q ss_pred HHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCch
Q 015370 218 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279 (408)
Q Consensus 218 m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~ 279 (408)
+.+.|++++.. -..++..+...+..-.|.++++.+.+. +...+..|.---+..+...|-+
T Consensus 13 l~~~g~r~T~q-R~~Il~~L~~~~~~~sa~ei~~~l~~~-~~~is~aTVYR~L~~L~e~Glv 72 (145)
T 2fe3_A 13 LKETGVRITPQ-RHAILEYLVNSMAHPTADDIYKALEGK-FPNMSVATVYNNLRVFRESGLV 72 (145)
T ss_dssp HHHTTCCCCHH-HHHHHHHHHHCSSCCCHHHHHHHHGGG-CTTCCHHHHHHHHHHHHHTTSE
T ss_pred HHHcCCCCCHH-HHHHHHHHHhCCCCCCHHHHHHHHHHh-CCCCChhhHHHHHHHHHHCCCE
Confidence 34445444332 222333333334444455555555442 3333444444444444444443
No 310
>4ets_A Ferric uptake regulation protein; metal binding protein, transcription factor; 2.10A {Campylobacter jejuni subsp}
Probab=44.76 E-value=81 Score=23.67 Aligned_cols=58 Identities=3% Similarity=-0.062 Sum_probs=36.3
Q ss_pred HhcccCccchHHHHHHHHHhcCCHHHHHHHHHHHHhc--cCCCChhhHHHHHHHHHhcCCH
Q 015370 292 KSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT--KQKMTSRNYICILSSYLMLGHL 350 (408)
Q Consensus 292 ~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~--~~~p~~~~~~~li~~~~~~g~~ 350 (408)
+.+.+. +.--..++..+...+..-.|.++++.+.+. +...+..|.---++.+...|-+
T Consensus 26 ~~g~r~-T~qR~~IL~~L~~~~~h~sA~eI~~~l~~~~~~~~is~aTVYRtL~~L~e~Glv 85 (162)
T 4ets_A 26 QGGLKY-TKQREVLLKTLYHSDTHYTPESLYMEIKQAEPDLNVGIATVYRTLNLLEEAEMV 85 (162)
T ss_dssp HHTCCC-CHHHHHHHHHHHSCCSCBCHHHHHHHHHHHCGGGCCCHHHHHHHHHHHHHTTSE
T ss_pred HcCCCC-CHHHHHHHHHHHhCCCCCCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHCCCE
Confidence 344443 233345566666666777788888887776 6666666666666666666644
No 311
>2r9g_A AAA ATPase, central region; structural genomics, PSI-2, protein structure initia YORK SGX research center for structural genomics, nysgxrc; 2.09A {Enterococcus faecium} SCOP: a.80.1.2 PDB: 2qw6_A
Probab=44.08 E-value=1.1e+02 Score=23.88 Aligned_cols=68 Identities=4% Similarity=-0.041 Sum_probs=42.1
Q ss_pred HHHHHHHHHh---cCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCH-----HHHHHHHHHHhcCCCCCCCHH
Q 015370 195 YNEMMTLYMS---VGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI-----DQVKKFLDEMSCDSGGSDDWV 264 (408)
Q Consensus 195 ~~~li~~~~~---~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~-----~~a~~~~~~~~~~~~~~~~~~ 264 (408)
+--+|+++.| -.+.+.|+-.+-+|.+.| .|.-..-..++-+.-..|.- ..|...++.... .|.+....
T Consensus 14 HYd~iSAf~KSiRGSDpDAAly~LaRml~~G-Dp~~IaRRLvi~AsEDIGlAdP~Al~~a~aa~~a~~~-iG~PE~~i 89 (204)
T 2r9g_A 14 HYDVISAFQKSIRGSDVDAALHYLARLVEAG-DLASICRRLMVIGYEDIGLGNPAAAARTVNAVLAAEK-LGLPEARI 89 (204)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHTTGGGCHHHHHHHHHHHHHHHH-HCTTTTHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHH-hCCCHHHH
Confidence 3345566544 568888888888888888 77766666667676666542 234444444444 35544433
No 312
>3ygs_P Procaspase 9; apoptosis, caspase activation, caspase recruitment, recognition complex; 2.50A {Homo sapiens} SCOP: a.77.1.3
Probab=43.56 E-value=46 Score=22.46 Aligned_cols=64 Identities=9% Similarity=-0.050 Sum_probs=35.3
Q ss_pred HHHHHHHHcCCCCChhhHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHH
Q 015370 74 NVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGE 144 (408)
Q Consensus 74 ~~l~~~~~~g~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~ 144 (408)
.+++.+.+.|+- +......+- ......+.+.|.++++.+...| +..|..++.++...|+..-|.
T Consensus 25 ~vld~L~~~~vl-t~~~~e~I~-~~~~~t~~~~ar~Lld~L~~rG-----~~Af~~F~~aL~et~~~~La~ 88 (97)
T 3ygs_P 25 QLWDVLLSRELF-RPHMIEDIQ-RAGSGSRRDQARQLIIDLETRG-----SQALPLFISCLEDTGQDMLAS 88 (97)
T ss_dssp TTHHHHHHTTSS-CHHHHHHHH-TSTTCCHHHHHHHHHHHHTTSC-----TTHHHHHHHHHHTTTCHHHHH
T ss_pred HHHHHHHHcCCC-CHHHHHHHH-hccCCChHHHHHHHHHHHHHcC-----hHHHHHHHHHHHHcCcHHHHH
Confidence 466666666643 333222222 1101135677777777777666 566777777776666655444
No 313
>2b7e_A PRE-mRNA processing protein PRP40; structural protein; NMR {Saccharomyces cerevisiae} SCOP: a.159.2.1
Probab=42.73 E-value=30 Score=20.96 Aligned_cols=32 Identities=16% Similarity=0.217 Sum_probs=20.2
Q ss_pred CcHHHHHHHHHHcCCCCChhhHHHHHHHH-Hhc
Q 015370 70 RSATNVIQRWVSEGNQATVSELRHILKEL-RKS 101 (408)
Q Consensus 70 ~~a~~~l~~~~~~g~~~~~~~~~~li~~~-~~~ 101 (408)
+.|.+.|.+|.+....++..+|...|+.. ++-
T Consensus 3 eEae~aF~~lL~~~~V~s~wsweqamr~i~i~D 35 (59)
T 2b7e_A 3 MEAEKEFITMLKENQVDSTWSFSRIISELGTRD 35 (59)
T ss_dssp THHHHHHHHHHHHTTCCSSCCHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHcCCCCCCcHHHHHHHhccCC
Confidence 45566666666666666666777777666 443
No 314
>1oai_A Nuclear RNA export factor; nuclear transport, nuclear transport factor; 1.0A {Homo sapiens} SCOP: a.5.2.3
Probab=41.51 E-value=19 Score=21.86 Aligned_cols=25 Identities=8% Similarity=0.011 Sum_probs=19.9
Q ss_pred cccHHHHHHHHHHHHhccCCCCChH
Q 015370 101 SQRYKHALEISEWMVTHKEFVLSDS 125 (408)
Q Consensus 101 ~~~~~~a~~~~~~~~~~~~~~~~~~ 125 (408)
.-+++.|+..|..+...|.++|+..
T Consensus 33 ~Wd~~~A~~~F~~l~~~~~IP~eAF 57 (59)
T 1oai_A 33 NWDYTRSAQAFTHLKAKGEIPEVAF 57 (59)
T ss_dssp TTCHHHHHHHHHHHHHTTCSCGGGG
T ss_pred CCCHHHHHHHHHHHHHcCCCCHHHh
Confidence 3489999999999998886776543
No 315
>1mzb_A Ferric uptake regulation protein; ferric uptake regulator, iron, DTXR, gene regulation; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.42
Probab=41.19 E-value=83 Score=22.67 Aligned_cols=60 Identities=3% Similarity=0.009 Sum_probs=24.6
Q ss_pred HHhCCCCCCHHHHHHHHHHHHhcC-CHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCch
Q 015370 218 IKRKNVVPDIFTYNLWISSCAATL-NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279 (408)
Q Consensus 218 m~~~g~~p~~~~~~~ll~~~~~~g-~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~ 279 (408)
+++.|++++.. -..++..+...+ ..-.|.++++.+.+. +...+..|.---+..+...|-+
T Consensus 9 l~~~g~r~T~q-R~~Il~~L~~~~~~~~sa~ei~~~l~~~-~~~is~aTVYR~L~~L~e~Glv 69 (136)
T 1mzb_A 9 LRKAGLKVTLP-RVKILQMLDSAEQRHMSAEDVYKALMEA-GEDVGLATVYRVLTQFEAAGLV 69 (136)
T ss_dssp HHHTTCCCCHH-HHHHHHHHHCC-CCSBCHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHTSE
T ss_pred HHHCCCCCCHH-HHHHHHHHHhCCCCCCCHHHHHHHHHhh-CCCCCHHHHHHHHHHHHHCCcE
Confidence 33444443332 222333333333 344455555555442 3333444444444444444443
No 316
>2xig_A Ferric uptake regulation protein; hpfur, transcription, homeostasis; HET: CIT; 1.85A {Helicobacter pylori}
Probab=41.18 E-value=86 Score=23.12 Aligned_cols=46 Identities=4% Similarity=-0.023 Sum_probs=19.8
Q ss_pred HHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCch
Q 015370 233 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279 (408)
Q Consensus 233 ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~ 279 (408)
++..+...+..-.|.++++.+.+. +...+..|.--.+..+...|-+
T Consensus 32 IL~~l~~~~~~~sa~ei~~~l~~~-~~~is~aTVYR~L~~L~e~Glv 77 (150)
T 2xig_A 32 VVSVLYRSGTHLSPEEITHSIRQK-DKNTSISSVYRILNFLEKENFI 77 (150)
T ss_dssp HHHHHHHCSSCBCHHHHHHHHHHH-STTCCHHHHHHHHHHHHHTTSE
T ss_pred HHHHHHhCCCCCCHHHHHHHHHHh-CCCCCHhhHHHHHHHHHHCCcE
Confidence 334443434444455555555442 2333444433444444444443
No 317
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=41.03 E-value=35 Score=27.62 Aligned_cols=19 Identities=16% Similarity=0.020 Sum_probs=10.2
Q ss_pred HHHhcCCHHHHHHHHHHHH
Q 015370 343 SYLMLGHLKEVGEIIDQWK 361 (408)
Q Consensus 343 ~~~~~g~~~~A~~~~~~~~ 361 (408)
..++.|+.+-+..++++-.
T Consensus 231 ~A~~~g~~~~v~~Ll~~g~ 249 (260)
T 3jxi_A 231 MAAKTGKIGIFQHIIRREI 249 (260)
T ss_dssp HHHHTTCHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHhCC
Confidence 3344566665555555543
No 318
>3eyy_A Putative iron uptake regulatory protein; NUR, nickel-uptake regulator, D-domain, dimerization domain, DB-domain, DNA-binding domain; 2.40A {Streptomyces coelicolor}
Probab=40.07 E-value=81 Score=23.11 Aligned_cols=35 Identities=6% Similarity=-0.018 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCc
Q 015370 243 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278 (408)
Q Consensus 243 ~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~ 278 (408)
.-.|.++++.+.+. +...+..|.-.-+..+...|-
T Consensus 33 h~ta~ei~~~l~~~-~~~is~~TVYR~L~~L~e~Gl 67 (145)
T 3eyy_A 33 HATPDDILGEVRKT-ASGINISTVYRTLELLEELGL 67 (145)
T ss_dssp SBCHHHHHHHHHTT-CTTCCHHHHHHHHHHHHHHTS
T ss_pred CCCHHHHHHHHHhh-CCCCCHhHHHHHHHHHHHCCc
Confidence 33455555555442 333344443344444444443
No 319
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=39.49 E-value=60 Score=23.84 Aligned_cols=110 Identities=9% Similarity=-0.038 Sum_probs=47.3
Q ss_pred HHHHhcCCHHHHHHHHHHHhcCCCCCCCHHH--HHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccc---hHHHHHHHH
Q 015370 235 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVK--YVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI---TYDFLIILY 309 (408)
Q Consensus 235 ~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~--~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~---~~~~li~~~ 309 (408)
...++.|+.+.+..+++.- +..++... -.+.+...+..|+.+-+.. +.+.+..++.. .++.| ...
T Consensus 13 ~~A~~~g~~~~v~~ll~~~----~~~~~~~~~~g~t~L~~A~~~~~~~~v~~-----Ll~~g~~~~~~~~~g~t~L-~~A 82 (165)
T 3twr_A 13 LEAAKAGDVETVKKLCTVQ----SVNCRDIEGRQSTPLHFAAGYNRVSVVEY-----LLQHGADVHAKDKGGLVPL-HNA 82 (165)
T ss_dssp HHHHHHTCHHHHHHHCCTT----TTTCCCTTTTCCCHHHHHHHTTCHHHHHH-----HHHTTCCTTCCCTTSCCHH-HHH
T ss_pred HHHHHhCCHHHHHHHHHcC----CCCccccccCCCCHHHHHHHcChHHHHHH-----HHhcCCCCCccCCCCCCHH-HHH
Confidence 3445667777666555432 21111111 1134445556666544443 33344433322 22222 233
Q ss_pred HhcCCHHHHHHHHHHHHhccCCCChhhHH--HHHHHHHhcCCHHHHHHHHH
Q 015370 310 AGLGNKDKIDQIWKSLRMTKQKMTSRNYI--CILSSYLMLGHLKEVGEIID 358 (408)
Q Consensus 310 ~~~~~~~~a~~~~~~m~~~~~~p~~~~~~--~li~~~~~~g~~~~A~~~~~ 358 (408)
+..|+.+-+.. +.+.|..++..... ..+...+..|+.+-+..+++
T Consensus 83 ~~~~~~~~v~~----Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 129 (165)
T 3twr_A 83 CSYGHYEVAEL----LVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQ 129 (165)
T ss_dssp HHTTCHHHHHH----HHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHcCcHHHHHH----HHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 44565554333 33445554433211 23344445566655544443
No 320
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E
Probab=39.09 E-value=98 Score=23.14 Aligned_cols=24 Identities=4% Similarity=0.141 Sum_probs=11.4
Q ss_pred hhHHHHHHHHHhcCCHHHHHHHHH
Q 015370 193 LMYNEMMTLYMSVGQVEKVALVVE 216 (408)
Q Consensus 193 ~~~~~li~~~~~~g~~~~a~~~~~ 216 (408)
.+|.-++..+.+...+-+.+..|+
T Consensus 157 i~~~Ef~~~~~~~~~~~~~l~~~d 180 (183)
T 1s6c_A 157 VTLDEFLESXQEDDNIMRSLQLFQ 180 (183)
T ss_dssp ECHHHHHHHTTSCCHHHHHHHHHH
T ss_pred EeHHHHHHHHhcChHHHHHHHHhh
Confidence 445555555444444444444444
No 321
>2fu4_A Ferric uptake regulation protein; DNA binding domain, helix-turn-helix, DNA binding protein; 1.80A {Escherichia coli}
Probab=38.97 E-value=75 Score=20.28 Aligned_cols=62 Identities=10% Similarity=0.066 Sum_probs=40.9
Q ss_pred HHHHHcCCCCChhhHHHHHHHHHhcc-cHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcCh
Q 015370 77 QRWVSEGNQATVSELRHILKELRKSQ-RYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGI 140 (408)
Q Consensus 77 ~~~~~~g~~~~~~~~~~li~~~~~~~-~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~ 140 (408)
+.+.+.|...+..- ..++..+...+ ..-.+.++++.+.+.+ ...+..|-...+..+.+.|-+
T Consensus 6 ~~l~~~g~~~t~~r-~~IL~~l~~~~~~~~s~~el~~~l~~~~-~~is~~TVyR~L~~L~~~Glv 68 (83)
T 2fu4_A 6 TALKKAGLKVTLPR-LKILEVLQEPDNHHVSAEDLYKRLIDMG-EEIGLATVYRVLNQFDDAGIV 68 (83)
T ss_dssp HHHHHTTCCCCHHH-HHHHHHHTSGGGSSBCHHHHHHHHHHTT-CCCCHHHHHHHHHHHHHHTSE
T ss_pred HHHHHcCCCcCHHH-HHHHHHHHhCCCCCCCHHHHHHHHHHhC-CCCCHhhHHHHHHHHHHCCCe
Confidence 34667787777655 34666666654 5667778888887765 455666666667777776654
No 322
>3ygs_P Procaspase 9; apoptosis, caspase activation, caspase recruitment, recognition complex; 2.50A {Homo sapiens} SCOP: a.77.1.3
Probab=38.76 E-value=60 Score=21.87 Aligned_cols=13 Identities=15% Similarity=0.348 Sum_probs=5.1
Q ss_pred HHHHHHHHHHHhC
Q 015370 174 EKAEELFERVKQS 186 (408)
Q Consensus 174 ~~A~~~~~~m~~~ 186 (408)
+.|.++++.+..+
T Consensus 54 ~~ar~Lld~L~~r 66 (97)
T 3ygs_P 54 DQARQLIIDLETR 66 (97)
T ss_dssp HHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHc
Confidence 3344444433333
No 323
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=38.44 E-value=3.3e+02 Score=28.60 Aligned_cols=86 Identities=9% Similarity=0.054 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHhccCCC-ChhhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHhcCChHHHHHHH
Q 015370 315 KDKIDQIWKSLRMTKQKM-TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 393 (408)
Q Consensus 315 ~~~a~~~~~~m~~~~~~p-~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~ 393 (408)
.++..+.|.++.+-- .+ |.......+.--...+++-.|++++.++.+.. |....|..++..+...| |+....+.
T Consensus 1265 ~~~~~~~~~el~k~~-d~~d~k~~~~~~~~~~~~~~~g~~~k~l~k~~~~k---~~~~~~~~~~~~~~~l~-w~h~~~~~ 1339 (1354)
T 3lxu_X 1265 LAEINELYTEIIKFV-DANDSKAIQFALWHAYAHGHYGRMYKYVVKLIEEK---RTRDHFVELAAINGALG-HEHIRTVI 1339 (1354)
T ss_dssp HHHHHHHHHHHTTSS-CTTSTTTHHHHHHHHHHHTCHHHHHHHHHHHHHHT---CCHHHHHHHHHHHHHHS-CHHHHHHH
T ss_pred HHHHHHHHHHHHhhc-ccCCceeehhHHHHHHHHHHHHHHHHHHHHHHhcc---ccHHHHHHHHHHHHHcC-CHHHHHHH
Confidence 344556666655432 22 33333333444446899999999999999864 68888988888887776 77777888
Q ss_pred HHHHhcCCCCCC
Q 015370 394 MLLLQKNCAPTN 405 (408)
Q Consensus 394 ~~m~~~g~~p~~ 405 (408)
+++.-..+.|+-
T Consensus 1340 ~~~~~~~~p~~~ 1351 (1354)
T 3lxu_X 1340 NRMMITAFPSSF 1351 (1354)
T ss_dssp HHHHHHHSCSSC
T ss_pred HhhhhhhCcccC
Confidence 887665555543
No 324
>2fu4_A Ferric uptake regulation protein; DNA binding domain, helix-turn-helix, DNA binding protein; 1.80A {Escherichia coli}
Probab=38.15 E-value=77 Score=20.21 Aligned_cols=29 Identities=3% Similarity=-0.115 Sum_probs=11.2
Q ss_pred HHHHHHHHHhCCCCCCHHHHHHHHHHHHh
Q 015370 211 VALVVEEIKRKNVVPDIFTYNLWISSCAA 239 (408)
Q Consensus 211 a~~~~~~m~~~g~~p~~~~~~~ll~~~~~ 239 (408)
+.++++.+.+.+...+..|..-.++.+..
T Consensus 36 ~~el~~~l~~~~~~is~~TVyR~L~~L~~ 64 (83)
T 2fu4_A 36 AEDLYKRLIDMGEEIGLATVYRVLNQFDD 64 (83)
T ss_dssp HHHHHHHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCHhhHHHHHHHHHH
Confidence 34444444443333333333333333333
No 325
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=38.11 E-value=3.3e+02 Score=27.44 Aligned_cols=131 Identities=8% Similarity=-0.121 Sum_probs=66.4
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcC
Q 015370 198 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 277 (408)
Q Consensus 198 li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~ 277 (408)
++..+...|.++-|.++..- ++.+...--.+..+|...|++++|.++|++.-. |+..+......
T Consensus 816 l~~~L~~~~~~~~a~eL~~~-----~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA~--gl~~~~~~~~~--------- 879 (950)
T 4gq2_M 816 LVEKLFLFKQYNACMQLIGW-----LNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSL--VLYSHTSQFAV--------- 879 (950)
T ss_dssp HHHHHHHTTCHHHHHHHGGG-----CCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCCC--TTCSSCCSCGG---------
T ss_pred HHHHHHHhcHHHHHHHHHhh-----cCCChHHHHHHHHHHHHcCCHHHHHHHHHHHhh--hcccCcccccc---------
Confidence 45555566666655443322 222333323455667777788888777776553 33222111000
Q ss_pred chhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCCh----hhHHHHHHHHHhcC
Q 015370 278 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS----RNYICILSSYLMLG 348 (408)
Q Consensus 278 ~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~----~~~~~li~~~~~~g 348 (408)
.+.... ++... ........-|..++..+.+.+.++.+.++-+...+.--.-|. ..|..++++.+..|
T Consensus 880 -~~~~~~-ll~~~--e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lAI~~~~~dd~~l~~~l~~r~f~~a~a~g 950 (950)
T 4gq2_M 880 -LREFQE-IAEKY--HHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDEDLSIAITHETLKTACAAG 950 (950)
T ss_dssp -GHHHHH-HHHHT--TTCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCSCCHHHHHHHHHHHHHHHHHHC
T ss_pred -hhhhhh-ccCcc--cccchhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcccCCccchHHHHHHHHHHHhhCC
Confidence 000111 11100 000111237788999999999999998888766543111122 24666777766554
No 326
>1mzb_A Ferric uptake regulation protein; ferric uptake regulator, iron, DTXR, gene regulation; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.42
Probab=37.86 E-value=1e+02 Score=22.15 Aligned_cols=62 Identities=11% Similarity=0.056 Sum_probs=43.2
Q ss_pred HHHHcCCCCChhhHHHHHHHHHhcc-cHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChH
Q 015370 78 RWVSEGNQATVSELRHILKELRKSQ-RYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIH 141 (408)
Q Consensus 78 ~~~~~g~~~~~~~~~~li~~~~~~~-~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~ 141 (408)
.+.+.|.+++..-. .++..+...+ ..-.|.++++.+.+.+ ...+..|.-.-++.+...|-+.
T Consensus 8 ~l~~~g~r~T~qR~-~Il~~L~~~~~~~~sa~ei~~~l~~~~-~~is~aTVYR~L~~L~e~Glv~ 70 (136)
T 1mzb_A 8 ELRKAGLKVTLPRV-KILQMLDSAEQRHMSAEDVYKALMEAG-EDVGLATVYRVLTQFEAAGLVV 70 (136)
T ss_dssp HHHHTTCCCCHHHH-HHHHHHHCC-CCSBCHHHHHHHHHHTT-CCCCHHHHHHHHHHHHHHTSEE
T ss_pred HHHHCCCCCCHHHH-HHHHHHHhCCCCCCCHHHHHHHHHhhC-CCCCHHHHHHHHHHHHHCCcEE
Confidence 46678888777654 4566666666 6778999999998876 4566666666677777777553
No 327
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=37.27 E-value=1.8e+02 Score=24.30 Aligned_cols=111 Identities=15% Similarity=0.091 Sum_probs=51.9
Q ss_pred HHHHHhcccHHHHHHHHHHHHhccCCCCCh--HHHHHHHHHHHhhcChHHHHHHHhcCCCC-CCCHHHHHHHHHHHHcCC
Q 015370 95 LKELRKSQRYKHALEISEWMVTHKEFVLSD--SDYATRIDLMTKVFGIHSGERYFEGLPLS-AKTSETYTALLHLYAGAK 171 (408)
Q Consensus 95 i~~~~~~~~~~~a~~~~~~~~~~~~~~~~~--~~~~~li~~~~~~g~~~~a~~~~~~~~~~-~~~~~~~~~ll~~~~~~~ 171 (408)
+...++.|+.+....++... + ..++. ..-.+.+...+..|+.+-+..+++.-... .+|..-++.| ...+..|
T Consensus 28 L~~A~~~g~~~~v~~ll~~~---~-~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L-~~A~~~g 102 (351)
T 3utm_A 28 LLEAARSGNEEKLMALLTPL---N-VNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPL-HNACSYG 102 (351)
T ss_dssp HHHHHHHTCHHHHHHHCCTT---T-TTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHH-HHHHHTT
T ss_pred HHHHHHcCCHHHHHHHHHhc---C-CCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHH-HHHHHCC
Confidence 44445677777766666532 1 22221 11123455556778877777776642221 1222222233 3334556
Q ss_pred CHHHHHHHHHHHHhCCCCCChh---hHHHHHHHHHhcCCHHHHHHHH
Q 015370 172 WTEKAEELFERVKQSNLSFNAL---MYNEMMTLYMSVGQVEKVALVV 215 (408)
Q Consensus 172 ~~~~A~~~~~~m~~~~~~p~~~---~~~~li~~~~~~g~~~~a~~~~ 215 (408)
+.+ +++.+.+.|..++.. -++ .+...+..|+.+-+..++
T Consensus 103 ~~~----iv~~Ll~~g~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll 144 (351)
T 3utm_A 103 HYE----VTELLLKHGACVNAMDLWQFT-PLHEAASKNRVEVCSLLL 144 (351)
T ss_dssp CHH----HHHHHHHTTCCTTCCCTTCCC-HHHHHHHTTCHHHHHHHH
T ss_pred CHH----HHHHHHHCCCCCCCCCCCCCC-HHHHHHHcCCHHHHHHHH
Confidence 655 444444555444322 222 333344566665444433
No 328
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=37.21 E-value=1.4e+02 Score=22.96 Aligned_cols=153 Identities=8% Similarity=-0.074 Sum_probs=76.3
Q ss_pred CChhhHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHHHHhcCCCCCCCHHHHHHHHH
Q 015370 86 ATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLH 165 (408)
Q Consensus 86 ~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~ll~ 165 (408)
++...-...+..+.+.+..+ +...+..+.. .++...-...+.++.+.++.+....+.+.+.. +|..+-...+.
T Consensus 31 ~~~~vR~~A~~~L~~~~~~~-~~~~L~~~l~----~~~~~vr~~a~~aL~~~~~~~~~~~L~~~l~~--~~~~vr~~a~~ 103 (211)
T 3ltm_A 31 DSYYVRRAAAYALGKIGDER-AVEPLIKALK----DEDAWVRRAAADALGQIGDERAVEPLIKALKD--EDGWVRQSAAV 103 (211)
T ss_dssp SSHHHHHHHHHHHHHHCCGG-GHHHHHHHTT----CSCHHHHHHHHHHHHHHCCGGGHHHHHHHTTC--SSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCcc-HHHHHHHHHc----CCCHHHHHHHHHHHHhhCCHHHHHHHHHHHcC--CCHHHHHHHHH
Confidence 45555555666666666532 3333333333 24555555666666666665444444444432 55555566666
Q ss_pred HHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHH
Q 015370 166 LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 245 (408)
Q Consensus 166 ~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~ 245 (408)
++.+.++.+ +...+.++... ++..+-...+.++.+.|+.+ +...+..+.. .++...-...+.++.+.+.. .
T Consensus 104 aL~~~~~~~-~~~~L~~~l~d---~~~~vr~~a~~aL~~~~~~~-~~~~L~~~l~---d~~~~vr~~a~~aL~~~~~~-~ 174 (211)
T 3ltm_A 104 ALGQIGDER-AVEPLIKALKD---EDWFVRIAAAFALGEIGDER-AVEPLIKALK---DEDGWVRQSAADALGEIGGE-R 174 (211)
T ss_dssp HHHHHCCGG-GHHHHHHHTTC---SSHHHHHHHHHHHHHHCCGG-GHHHHHHHTT---CSSHHHHHHHHHHHHHHCSH-H
T ss_pred HHHHhCcHH-HHHHHHHHHhC---CCHHHHHHHHHHHHHcCCHH-HHHHHHHHHc---CCCHHHHHHHHHHHHHhCch-h
Confidence 666666532 33444444432 35555555566666655532 3333333332 24555555555555555543 2
Q ss_pred HHHHHHHHh
Q 015370 246 VKKFLDEMS 254 (408)
Q Consensus 246 a~~~~~~~~ 254 (408)
+...+..+.
T Consensus 175 ~~~~L~~~l 183 (211)
T 3ltm_A 175 VRAAMEKLA 183 (211)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 333333333
No 329
>2w57_A Ferric uptake regulation protein; gene regulation, transcription regulation, transport, iron, repressor, DNA-binding, transcription; 2.60A {Vibrio cholerae}
Probab=37.16 E-value=98 Score=22.79 Aligned_cols=64 Identities=14% Similarity=0.097 Sum_probs=45.0
Q ss_pred HHHHHHcCCCCChhhHHHHHHHHHhcc-cHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChH
Q 015370 76 IQRWVSEGNQATVSELRHILKELRKSQ-RYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIH 141 (408)
Q Consensus 76 l~~~~~~g~~~~~~~~~~li~~~~~~~-~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~ 141 (408)
.+.+.+.|.+++..-. .++..+...+ ..-.|.++++.+.+.+ ...+..|.-.-+..+...|-+.
T Consensus 5 ~~~l~~~g~r~T~qR~-~Il~~L~~~~~~h~sa~ei~~~l~~~~-~~is~aTVYR~L~~L~e~Glv~ 69 (150)
T 2w57_A 5 NQALKDAGLKVTLPRL-KILEVLQQPECQHISAEELYKKLIDLG-EEIGLATVYRVLNQFDDAGIVT 69 (150)
T ss_dssp HHHHHHTTCCCCHHHH-HHHHHHTSGGGSSEEHHHHHHHHHHTT-CCCCHHHHHHHHHHHHHTTSEE
T ss_pred HHHHHHcCCCCCHHHH-HHHHHHHhCCCCCCCHHHHHHHHHHhC-CCCCHHHHHHHHHHHHHCCcEE
Confidence 3446778888877654 4566666666 6778999999998876 4566666666677777777543
No 330
>2ion_A PDCD4, programmed cell death 4, PDCD4; alpha-helical, antitumor protein; 1.57A {Mus musculus} SCOP: a.118.1.14 PDB: 2ios_A 2iol_A
Probab=36.91 E-value=1.3e+02 Score=22.35 Aligned_cols=62 Identities=11% Similarity=0.082 Sum_probs=35.9
Q ss_pred HHHHHHHHHhhcChHHHHHHHhcCCCC-CCCHHHHHHHHHHHHcCCC--HHHHHHHHHHHHhCCC
Q 015370 127 YATRIDLMTKVFGIHSGERYFEGLPLS-AKTSETYTALLHLYAGAKW--TEKAEELFERVKQSNL 188 (408)
Q Consensus 127 ~~~li~~~~~~g~~~~a~~~~~~~~~~-~~~~~~~~~ll~~~~~~~~--~~~A~~~~~~m~~~~~ 188 (408)
...++.=|...|+.++|.+.++++... .....+...+..++-+.++ .+.+..++..+...|+
T Consensus 12 i~~lL~EY~~~~D~~EA~~cl~EL~~p~f~~e~V~~~i~~alE~~~~~~re~~~~LL~~L~~~~~ 76 (152)
T 2ion_A 12 IDMLLKEYLLSGDISEAEHCLKELEVPHFHHELVYEAIVMVLESTGESAFKMILDLLKSLWKSST 76 (152)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHTCGGGHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHhCCCcchHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHCCC
Confidence 345666666777777777777777531 1123444455555555322 4456667777766653
No 331
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=36.66 E-value=1.9e+02 Score=24.29 Aligned_cols=85 Identities=11% Similarity=-0.033 Sum_probs=42.5
Q ss_pred HHHHHHHcCchhhhHHHHHHHHHHhcccC---ccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHH
Q 015370 269 LVNIYITASHLVNAESSTLVEAEKSITQR---QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYL 345 (408)
Q Consensus 269 li~~~~~~~~~~~a~~~~~~~~~~~~~~~---~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~ 345 (408)
.+...+..|..+.+.. ++.. .+..+ |..-++.|..+ +..|+.+-+ +.+.+.|..++..+ .+...+
T Consensus 242 ~L~~a~~~~~~~~v~~-Ll~~---~~~~vn~~d~~G~TpL~~A-~~~g~~~iv----~~Ll~~GAd~n~~~---~L~~A~ 309 (337)
T 4g8k_A 242 PLILAVEKKHLGLVQR-LLEQ---EHIEINDTDSDGKTALLLA-VELKLKKIA----ELLCKRGASTDCGD---LVMTAR 309 (337)
T ss_dssp HHHHHHHTTCHHHHHH-HHTS---TTCCTTCBCTTSCBHHHHH-HHTTCHHHH----HHHHTTSCSSTTCC---HHHHHH
T ss_pred HHHHHHHhhhhHHHHH-HHHh---cCCcccCcCCCCCCHHHHH-HHcCCHHHH----HHHHHCCCCCCCCC---HHHHHH
Confidence 4455667777776665 3321 22222 22223334333 456666544 44456788887765 344445
Q ss_pred hcCCHHHHHHHHHHHHhhCCCCCCH
Q 015370 346 MLGHLKEVGEIIDQWKQSATSDFDI 370 (408)
Q Consensus 346 ~~g~~~~A~~~~~~~~~~~~~~~~~ 370 (408)
+.|+.+-+ +-+++.| -.||.
T Consensus 310 ~~~~~~iv----~~Ll~~G-A~~d~ 329 (337)
T 4g8k_A 310 RNYDHSLV----KVLLSHG-AKEDF 329 (337)
T ss_dssp HTTCHHHH----HHHHHTT-CCC--
T ss_pred HcCCHHHH----HHHHHCc-CCCCC
Confidence 66776544 3344444 34553
No 332
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=35.87 E-value=1e+02 Score=24.05 Aligned_cols=155 Identities=12% Similarity=0.001 Sum_probs=77.4
Q ss_pred HHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCcc---chHHHHHHHH
Q 015370 233 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW---ITYDFLIILY 309 (408)
Q Consensus 233 ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~---~~~~~li~~~ 309 (408)
.+...+..|+.+....+++.-... ....+.... +.+...+..|+.+-... +.+.+..++. ..++.|. ..
T Consensus 9 ~l~~A~~~g~~~~v~~ll~~~~~~-~~~~~~~g~-t~L~~A~~~g~~~~v~~-----Ll~~g~~~~~~~~~g~t~L~-~A 80 (231)
T 3aji_A 9 MICNLAYSGKLDELKERILADKSL-ATRTDQDSR-TALHWACSAGHTEIVEF-----LLQLGVPVNDKDDAGWSPLH-IA 80 (231)
T ss_dssp HHHHHHHHTCHHHHHHHHHHCGGG-GGCCCTTSC-CHHHHHHHHTCHHHHHH-----HHHTTCCSCCCCTTSCCHHH-HH
T ss_pred hHHHHHHhCCHHHHHHHHHhchhh-hhcCCCCCC-CHHHHHHHcCcHHHHHH-----HHHhCCCCCCcCCCCCCHHH-HH
Confidence 355667789999888888764331 112232222 34455566777665554 3344444332 2233333 33
Q ss_pred HhcCCHHHHHHHHHHHHhccCCCChhhH--HHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHhcCChH
Q 015370 310 AGLGNKDKIDQIWKSLRMTKQKMTSRNY--ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 387 (408)
Q Consensus 310 ~~~~~~~~a~~~~~~m~~~~~~p~~~~~--~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~ 387 (408)
+..|+.+-+. .+.+.|..++.... ...+...+..|+.+-+..+++.-..- ...+..-.+. +...+..|+.+
T Consensus 81 ~~~~~~~~v~----~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~--~~~~~~g~t~-L~~A~~~~~~~ 153 (231)
T 3aji_A 81 ASAGXDEIVK----ALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANP--DAKDHYDATA-MHRAAAKGNLK 153 (231)
T ss_dssp HHHTCHHHHH----HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCH-HHHHHHHTCHH
T ss_pred HHcCHHHHHH----HHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC--CCcCCCCCcH-HHHHHHcCCHH
Confidence 4566665444 44455665543321 12444455678877666555431111 1112222222 33344556654
Q ss_pred HHHHHHHHHHhcCCCCCCC
Q 015370 388 KANEFHMLLLQKNCAPTNA 406 (408)
Q Consensus 388 ~a~~~~~~m~~~g~~p~~~ 406 (408)
+++.+.+.|..++..
T Consensus 154 ----~v~~Ll~~g~~~~~~ 168 (231)
T 3aji_A 154 ----MVHILLFYKASTNIQ 168 (231)
T ss_dssp ----HHHHHHHTTCCSCCC
T ss_pred ----HHHHHHhcCCCcccc
Confidence 455556677766643
No 333
>2w57_A Ferric uptake regulation protein; gene regulation, transcription regulation, transport, iron, repressor, DNA-binding, transcription; 2.60A {Vibrio cholerae}
Probab=35.16 E-value=94 Score=22.91 Aligned_cols=60 Identities=7% Similarity=-0.012 Sum_probs=26.8
Q ss_pred HHhCCCCCCHHHHHHHHHHHHhcC-CHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCch
Q 015370 218 IKRKNVVPDIFTYNLWISSCAATL-NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 279 (408)
Q Consensus 218 m~~~g~~p~~~~~~~ll~~~~~~g-~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~ 279 (408)
+.+.|++++..= ..++..+...+ ..-.|.++++.+.+. +...+..|.---+..+...|-+
T Consensus 8 l~~~g~r~T~qR-~~Il~~L~~~~~~h~sa~ei~~~l~~~-~~~is~aTVYR~L~~L~e~Glv 68 (150)
T 2w57_A 8 LKDAGLKVTLPR-LKILEVLQQPECQHISAEELYKKLIDL-GEEIGLATVYRVLNQFDDAGIV 68 (150)
T ss_dssp HHHTTCCCCHHH-HHHHHHHTSGGGSSEEHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHTTSE
T ss_pred HHHcCCCCCHHH-HHHHHHHHhCCCCCCCHHHHHHHHHHh-CCCCCHHHHHHHHHHHHHCCcE
Confidence 444555444322 22333333333 344455555555553 3334444444444555555543
No 334
>3eiq_C Programmed cell death protein 4; PDCD4, anti-oncogene, apoptosis, cell cycle, nucleus, phosph RNA-binding, ATP-binding, helicase, hydrolase; 3.50A {Mus musculus}
Probab=35.05 E-value=2.2e+02 Score=24.66 Aligned_cols=64 Identities=20% Similarity=0.265 Sum_probs=31.8
Q ss_pred HHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCC--HHHHHHHHHHHHhccCC
Q 015370 266 YVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN--KDKIDQIWKSLRMTKQK 331 (408)
Q Consensus 266 ~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~--~~~a~~~~~~m~~~~~~ 331 (408)
...++.-|...++.++|.+ .++++...... .......+..++-+.++ .+.+.+++..+...|+-
T Consensus 220 i~~lL~EY~~s~D~~EA~~-ci~EL~~p~fh-he~V~~av~~aLE~~~~~~re~~~~LL~~L~~~gll 285 (358)
T 3eiq_C 220 IDMLLKEYLLSGDISEAEH-CLKELEVPHFH-HELVYEAIVMVLESTGESAFKMILDLLKSLWKSSTI 285 (358)
T ss_dssp HHHHHHHHHHHCCHHHHHH-HHHHHCCTTCH-HHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHhccCCCHHHHHH-HHHHccCCcch-HHHHHHHHHHHHccCchHHHHHHHHHHHHHHHCCCC
Confidence 4566666777777777777 55554321111 12223334444443322 34455666666555543
No 335
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=34.79 E-value=62 Score=25.56 Aligned_cols=19 Identities=11% Similarity=0.001 Sum_probs=10.0
Q ss_pred HHHHHhhcChHHHHHHHhc
Q 015370 131 IDLMTKVFGIHSGERYFEG 149 (408)
Q Consensus 131 i~~~~~~g~~~~a~~~~~~ 149 (408)
+...+..|+.+-+..+++.
T Consensus 81 L~~A~~~~~~~~~~~Ll~~ 99 (237)
T 3b7b_A 81 LHLAAKKGHYEVVQYLLSN 99 (237)
T ss_dssp HHHHHHTTCHHHHHHHHTT
T ss_pred HHHHHHcCCHHHHHHHHhC
Confidence 3344455666655555554
No 336
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=34.61 E-value=2.6e+02 Score=25.32 Aligned_cols=141 Identities=10% Similarity=-0.024 Sum_probs=79.1
Q ss_pred CCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCHHHHHH
Q 015370 241 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQ 320 (408)
Q Consensus 241 g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~ 320 (408)
.+.+-|.++-.+ .|++--...|..-.+.+...|++++|.+ +... ...+.-.+..|.+.+-..=...|+..-.++
T Consensus 343 ~n~~lA~~lA~R----~~LpGAd~L~~~~F~~l~~~g~y~~AA~-~aA~-sP~giLRt~~Ti~rFk~vp~~pgq~splL~ 416 (494)
T 1bpo_A 343 QNPDLALRMAVR----NNLAGAEELFARKFNALFAQGNYSEAAK-VAAN-APKGILRTPDTIRRFQSVPAQPGQTSPLLQ 416 (494)
T ss_dssp CCHHHHHHHHHH----TTCSSCHHHHHHHHHHHHHTTCHHHHHH-HHHH-SGGGSSCSHHHHHHHTTSCCCTTSCCHHHH
T ss_pred CCHHHHHHHHHh----cCCccHHHHHHHHHHHHHHcCCHHHHHH-HHHh-CccccccCHHHHHHHhcCCCCCCCCCHHHH
Confidence 556655554433 4555555666666777778888888877 3222 122233344444444333334466666777
Q ss_pred HHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHH
Q 015370 321 IWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 397 (408)
Q Consensus 321 ~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~ 397 (408)
+|..+.+.| +.+..-=..+++.-...|+.+-..+++.+ +....+...=. + .+..+...|+.+|.+..
T Consensus 417 YF~~Ll~~g-~Ln~~ESlEl~r~vL~q~r~~llekWl~e----~KL~~SEeLGD-l----vk~~d~~LAl~IY~~a~ 483 (494)
T 1bpo_A 417 YFGILLDQG-QLNKYESLELCRPVLQQGRKQLLEKWLKE----DKLECSEELGD-L----VKSVDPTLALSVYLRAN 483 (494)
T ss_dssp HHHHHHHHS-CCCHHHHHHHHHHHHHTTCHHHHHHHHHH----TCSCCCHHHHH-H----HHHHCSHHHHHHHHHHC
T ss_pred HHHHHhccC-ccchHHhhHHhHHHHhccHHHHHHHHHhc----CCccccHHhHh-h----hhhcCHHHHHHHHHHcC
Confidence 888777776 44543333466666677777666665554 33444443222 1 14446667777776653
No 337
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=33.83 E-value=2.1e+02 Score=23.93 Aligned_cols=111 Identities=14% Similarity=0.095 Sum_probs=58.8
Q ss_pred HHHHHHhhcChHHHHHHHhcCCCC--CCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChh---hHHHHHHHHHh
Q 015370 130 RIDLMTKVFGIHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL---MYNEMMTLYMS 204 (408)
Q Consensus 130 li~~~~~~g~~~~a~~~~~~~~~~--~~~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~---~~~~li~~~~~ 204 (408)
.+...++.|+.+....++...... ..|..-.+ .+...+..|+.+-+ +.+.+.|..++.. -++. +...+.
T Consensus 27 ~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t-~L~~A~~~g~~~~v----~~Ll~~g~~~~~~~~~g~t~-L~~A~~ 100 (351)
T 3utm_A 27 ELLEAARSGNEEKLMALLTPLNVNCHASDGRKST-PLHLAAGYNRVRIV----QLLLQHGADVHAKDKGGLVP-LHNACS 100 (351)
T ss_dssp HHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCC-HHHHHHHTTCHHHH----HHHHHTTCCTTCCCTTCCCH-HHHHHH
T ss_pred hHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCC-HHHHHHHcCCHHHH----HHHHHcCCCCCccCCCCCcH-HHHHHH
Confidence 455567889999999988764332 12222222 34445566776644 4444556444322 2233 344456
Q ss_pred cCCHHHHHHHHHHHHhCCCCCCHH---HHHHHHHHHHhcCCHHHHHHHHH
Q 015370 205 VGQVEKVALVVEEIKRKNVVPDIF---TYNLWISSCAATLNIDQVKKFLD 251 (408)
Q Consensus 205 ~g~~~~a~~~~~~m~~~g~~p~~~---~~~~ll~~~~~~g~~~~a~~~~~ 251 (408)
.|+.+-+ +.+.+.|..++.. -++ .+...+..|+.+-+..+++
T Consensus 101 ~g~~~iv----~~Ll~~g~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~ 145 (351)
T 3utm_A 101 YGHYEVT----ELLLKHGACVNAMDLWQFT-PLHEAASKNRVEVCSLLLS 145 (351)
T ss_dssp TTCHHHH----HHHHHTTCCTTCCCTTCCC-HHHHHHHTTCHHHHHHHHH
T ss_pred CCCHHHH----HHHHHCCCCCCCCCCCCCC-HHHHHHHcCCHHHHHHHHH
Confidence 6776544 4444556544321 222 3344456788776655554
No 338
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Probab=33.75 E-value=75 Score=25.28 Aligned_cols=131 Identities=9% Similarity=0.074 Sum_probs=71.4
Q ss_pred CCCChhhHHHHHHHHHhcccHH-HHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHHHHhcCCCCC---CCHHH
Q 015370 84 NQATVSELRHILKELRKSQRYK-HALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSA---KTSET 159 (408)
Q Consensus 84 ~~~~~~~~~~li~~~~~~~~~~-~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~---~~~~~ 159 (408)
...+...+..++..+...+... .+..+|+.+-..+.-..+..-|..++..+.....-+....+|+.+-..+ .+..-
T Consensus 80 G~Is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~d~~G~I~~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E 159 (229)
T 3dd4_A 80 GVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEE 159 (229)
T ss_dssp CCCCHHHHHHHHHHHSCSSSHHHHHHHHHHTTCSSCCSSCCHHHHHHHHHHHHHSCHHHHHHHHHHHHCTTCSSCCBHHH
T ss_pred CCcCHHHHHHHHHHHCCCCCcHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHcCCChHHHHHHHHHHhCCCCCCeECHHH
Confidence 3466666666666654333333 3446666665443224555555555555554444455556666554432 34444
Q ss_pred HHHHHHHHH------------cCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHH
Q 015370 160 YTALLHLYA------------GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 216 (408)
Q Consensus 160 ~~~ll~~~~------------~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~ 216 (408)
+..++..+. ..-.-+.+..+|..+-..+ -...+|.-++..+.+...+-++++.|+
T Consensus 160 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~--dG~Is~~EF~~~~~~~~~~~~~~~~~D 226 (229)
T 3dd4_A 160 MLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNK--DGVVTIDEFIESCQKDENIMRSMQLFE 226 (229)
T ss_dssp HHHHHHHHHHHCC-----------CCTHHHHHHHHHCSSC--SSBCCHHHHHHHHHTCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhccccCCCcchhhHHHHHHHHHHHhcCCC--CCcEeHHHHHHHHHhCHHHHHHHHhcc
Confidence 444444432 1112356777887775443 134678888888877666666666654
No 339
>3bu8_A Telomeric repeat-binding factor 2; TRF2 TRFH domain TRF2 dimerization domain TIN2 peptide, alternative splicing, cell cycle, chromosomal protein; 2.15A {Homo sapiens} SCOP: a.146.1.1 PDB: 3bua_A* 1h6p_A
Probab=33.51 E-value=1.3e+02 Score=23.81 Aligned_cols=22 Identities=18% Similarity=0.166 Sum_probs=11.3
Q ss_pred HHHHcCCCHHHHHHHHHHHHhC
Q 015370 165 HLYAGAKWTEKAEELFERVKQS 186 (408)
Q Consensus 165 ~~~~~~~~~~~A~~~~~~m~~~ 186 (408)
-.|.+.|.+++|.+++++....
T Consensus 122 ~VCiek~~f~kA~eiLkr~~~~ 143 (235)
T 3bu8_A 122 IICIKNKEFEKASKILKKHMSK 143 (235)
T ss_dssp HHHHHTTCHHHHHHHHHHHSTT
T ss_pred HHHHHhcchHHHHHHHHHHhcC
Confidence 3445555555555555555443
No 340
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8
Probab=33.36 E-value=1.6e+02 Score=22.34 Aligned_cols=12 Identities=8% Similarity=0.291 Sum_probs=5.9
Q ss_pred HHHHHHHHHHHH
Q 015370 173 TEKAEELFERVK 184 (408)
Q Consensus 173 ~~~A~~~~~~m~ 184 (408)
-+++..++..+-
T Consensus 128 ~~~~~~~~~~~D 139 (191)
T 1y1x_A 128 EQTFQALMRKFD 139 (191)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhC
Confidence 344555555543
No 341
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=33.32 E-value=1.3e+02 Score=21.96 Aligned_cols=18 Identities=6% Similarity=-0.132 Sum_probs=10.2
Q ss_pred HHHHhhcChHHHHHHHhc
Q 015370 132 DLMTKVFGIHSGERYFEG 149 (408)
Q Consensus 132 ~~~~~~g~~~~a~~~~~~ 149 (408)
...++.|+.+.+..+++.
T Consensus 13 ~~A~~~g~~~~v~~ll~~ 30 (165)
T 3twr_A 13 LEAAKAGDVETVKKLCTV 30 (165)
T ss_dssp HHHHHHTCHHHHHHHCCT
T ss_pred HHHHHhCCHHHHHHHHHc
Confidence 344556666666666553
No 342
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=33.15 E-value=1.5e+02 Score=25.36 Aligned_cols=98 Identities=13% Similarity=0.094 Sum_probs=49.7
Q ss_pred CCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhh--HHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHH
Q 015370 155 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALM--YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 232 (408)
Q Consensus 155 ~~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~--~~~li~~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ 232 (408)
.|..-++.|..+ +..|+.+.+..++ +.|..++... -.+.+...+..|+.+-+..++ +.|..++...-.+
T Consensus 16 ~d~~g~t~L~~A-a~~g~~~~v~~Ll----~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll----~~g~~~~~~~g~t 86 (364)
T 3ljn_A 16 SDDENMEKIHVA-ARKGQTDEVRRLI----ETGVSPTIQNRFGCTALHLACKFGCVDTAKYLA----SVGEVHSLWHGQK 86 (364)
T ss_dssp CCHHHHHHHHHH-HHHTCHHHHHHHH----HTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHH----HHCCCCCCBTTBC
T ss_pred cCCCCCCHHHHH-HHcCCHHHHHHHH----HcCCCccccCCCCCcHHHHHHHcCCHHHHHHHH----HCCCCccccCCCC
Confidence 456666665554 4557766554444 4554444321 123344455667765544444 3343333312222
Q ss_pred HHHHHHhcCCHHHHHHHHHHHhcCCCCCCC
Q 015370 233 WISSCAATLNIDQVKKFLDEMSCDSGGSDD 262 (408)
Q Consensus 233 ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~ 262 (408)
.+...+..|+.+-+..+++.... .+..++
T Consensus 87 ~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~ 115 (364)
T 3ljn_A 87 PIHLAVMANKTDLVVALVEGAKE-RGQMPE 115 (364)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHH-HTCCHH
T ss_pred HHHHHHHcCCHHHHHHHHHhccc-cCCCHH
Confidence 34444567888877777776554 244443
No 343
>3bge_A Predicted ATPase; structural genomics, predicted AAA+ATPase C-terminal fragmen protein structure initiative; 1.85A {Haemophilus influenzae} SCOP: a.80.1.2
Probab=32.61 E-value=1.8e+02 Score=22.75 Aligned_cols=47 Identities=9% Similarity=-0.017 Sum_probs=31.5
Q ss_pred HHHHHHHHh---cCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCC
Q 015370 196 NEMMTLYMS---VGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 242 (408)
Q Consensus 196 ~~li~~~~~---~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~ 242 (408)
--+|+++.| -.+.+.|+-.+-+|++.|-.|.-..-..++-+.-..|.
T Consensus 8 Yd~ISAf~KSiRGSDpDAAly~LaRMl~~GEDp~~IaRRLvi~AsEDIGl 57 (201)
T 3bge_A 8 YDLISALHKSVRGSAPDAALYWYARILTAGGDPLYVARRLLAIASEDVGN 57 (201)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHTTGG
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhccC
Confidence 345556543 46788888888888888877776666666666655543
No 344
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=32.50 E-value=2.3e+02 Score=24.02 Aligned_cols=114 Identities=10% Similarity=0.065 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHhhcChHHHHHHHhcCCCCCCCHHHHHHHHHHHHcCCCHHHHHH----HHHHHHhCCCCCChhhHHHHHH
Q 015370 125 SDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEE----LFERVKQSNLSFNALMYNEMMT 200 (408)
Q Consensus 125 ~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~A~~----~~~~m~~~~~~p~~~~~~~li~ 200 (408)
..|.++..-|.+.+++++|++++..- ...+.+.|+...|-+ +.+-..+.+++++......++.
T Consensus 34 Q~~Rtl~~Ry~~~~~~~eAidlL~~g-------------a~~ll~~~Q~~sa~DLa~llvev~~~~~~~~~~~~~~rl~~ 100 (312)
T 2wpv_A 34 QTLRTIANRYVRSKSYEHAIELISQG-------------ALSFLKAKQGGSGTDLIFYLLEVYDLAEVKVDDISVARLVR 100 (312)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHH-------------HHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHH-------------HHHHHHCCCcchHHHHHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence 34555556667777777777764332 123444566544443 3455556677777777777776
Q ss_pred HHHhcCCHH-HHHHHHHHHH----hCC--CCCCHHHHHHHHHHHHhcCCHHHHHHHHH
Q 015370 201 LYMSVGQVE-KVALVVEEIK----RKN--VVPDIFTYNLWISSCAATLNIDQVKKFLD 251 (408)
Q Consensus 201 ~~~~~g~~~-~a~~~~~~m~----~~g--~~p~~~~~~~ll~~~~~~g~~~~a~~~~~ 251 (408)
.+.....-+ .=.++++.+. +.| ..-|......+...|.+.|++.+|+..|-
T Consensus 101 l~~~~p~~~~~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 101 LIAELDPSEPNLKDVITGMNNWSIKFSEYKFGDPYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp HHTTCCTTCTTHHHHHHHHHHHHHHTSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHCCCCCchHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 665532111 1122223332 222 22355666677777888888888777653
No 345
>2f6m_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomes, trafficking complex, vacuole protei sorting, ESCRT protein complexes; HET: DDQ; 2.10A {Saccharomyces cerevisiae} SCOP: a.2.17.1 PDB: 2f66_A*
Probab=31.79 E-value=93 Score=19.23 Aligned_cols=49 Identities=6% Similarity=0.093 Sum_probs=36.5
Q ss_pred hHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcCh
Q 015370 90 ELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGI 140 (408)
Q Consensus 90 ~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~ 140 (408)
.++.+++.+++..-.+.++..+++..+.| ..+...|-.-.+.+++..-+
T Consensus 4 l~~Qll~l~Aed~AieDaiy~L~~aL~~g--~I~l~~ylK~vR~LaReQF~ 52 (65)
T 2f6m_A 4 GLNQLYNLVAQDYALTDTIEALSRMLHRG--TIPLDTFVKQGRELARQQFL 52 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHT--SSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHHHH
Confidence 35677888888888888888999888887 66677777667666665433
No 346
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=31.42 E-value=1e+02 Score=22.76 Aligned_cols=150 Identities=13% Similarity=0.020 Sum_probs=71.6
Q ss_pred HHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCcc---chHHHHHHHHH
Q 015370 234 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW---ITYDFLIILYA 310 (408)
Q Consensus 234 l~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~---~~~~~li~~~~ 310 (408)
+...+..|+.+.+..+++.-... -...+...+ +.+...+..|+.+-+.. ++ +.+..++. ...+. +...+
T Consensus 6 L~~A~~~g~~~~v~~ll~~~~~~-~~~~~~~g~-t~L~~A~~~~~~~~v~~-Ll----~~g~~~~~~~~~g~t~-L~~A~ 77 (172)
T 3v30_A 6 IHQLAAQGELDQLKEHLRKGDNL-VNKPDERGF-TPLIWASAFGEIETVRF-LL----EWGADPHILAKERESA-LSLAS 77 (172)
T ss_dssp HHHHHHTTCHHHHHHHHTTCSGG-GGCCCTTSC-CHHHHHHHTTCHHHHHH-HH----HHTCCTTCCCTTCCCH-HHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCccc-ccCCCCCCC-CHHHHHHHcCCHHHHHH-HH----HcCCCchhhcccCCCH-HHHHH
Confidence 34456778888777776543220 011222222 34455566777665555 33 44444332 22223 33345
Q ss_pred hcCCHHHHHHHHHHHHhccCCCChhhH--HHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHhcCChHH
Q 015370 311 GLGNKDKIDQIWKSLRMTKQKMTSRNY--ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEK 388 (408)
Q Consensus 311 ~~~~~~~a~~~~~~m~~~~~~p~~~~~--~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~ 388 (408)
..|+.+-+.. +.+.|..++.... ...+...+..|+.+-+..+++.-..- ...|..-.+ -+...+..|+.+-
T Consensus 78 ~~~~~~~v~~----Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~--~~~~~~g~t-~l~~A~~~~~~~~ 150 (172)
T 3v30_A 78 TGGYTDIVGL----LLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADL--TTEADSGYT-PMDLAVALGYRKV 150 (172)
T ss_dssp HTTCHHHHHH----HHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCC-HHHHHHHHTCHHH
T ss_pred HCCCHHHHHH----HHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc--cccCCCCCC-HHHHHHHhCcHHH
Confidence 6676654444 3455665554321 12344445668877666655531111 112222222 3344455677666
Q ss_pred HHHHHHHHHh
Q 015370 389 ANEFHMLLLQ 398 (408)
Q Consensus 389 a~~~~~~m~~ 398 (408)
+..+++...+
T Consensus 151 ~~~L~~~~~~ 160 (172)
T 3v30_A 151 QQVIENHILK 160 (172)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6555555443
No 347
>2o03_A Probable zinc uptake regulation protein FURB; DNA-binding, helix-turn-helix, zinc binding, GE regulation; 2.70A {Mycobacterium tuberculosis}
Probab=30.85 E-value=75 Score=22.74 Aligned_cols=47 Identities=15% Similarity=0.140 Sum_probs=32.5
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCH
Q 015370 304 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 350 (408)
Q Consensus 304 ~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~ 350 (408)
.++..+...+..-.|.++++.+.+.+...+..|.--.++.+...|-+
T Consensus 15 ~Il~~l~~~~~~~sa~ei~~~l~~~~~~is~~TVYR~L~~L~e~Glv 61 (131)
T 2o03_A 15 AISTLLETLDDFRSAQELHDELRRRGENIGLTTVYRTLQSMASSGLV 61 (131)
T ss_dssp HHHHHHHHCCSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTTSE
T ss_pred HHHHHHHhCCCCCCHHHHHHHHHHhCCCCCHhhHHHHHHHHHHCCCE
Confidence 34555556666777888888888777666777766667777766643
No 348
>2yru_A Steroid receptor RNA activator 1; SRAP, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=30.67 E-value=1e+02 Score=21.79 Aligned_cols=42 Identities=12% Similarity=0.002 Sum_probs=22.1
Q ss_pred HHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 015370 179 LFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 220 (408)
Q Consensus 179 ~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~m~~ 220 (408)
+|+.+.+..+.|++..--.-+..+...++++.|..+...+..
T Consensus 48 LfdkLn~~~Ls~~v~~~L~~l~~al~~~dy~~A~~ih~~l~t 89 (118)
T 2yru_A 48 LREQWAGGKLSIPVKKRMALLVQELLHHQWDAADDIHRSLMV 89 (118)
T ss_dssp HHHHHHHTCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 344444555544443333334444566677777776666654
No 349
>2rg8_A Programmed cell death protein 4; MA3 domain, heat repeats, anti-oncogene, apoptosis, cell cycle, cytoplasm, nucleus, phosphorylation, polymorphism; 1.80A {Homo sapiens} PDB: 2kzt_A
Probab=30.60 E-value=1.5e+02 Score=22.28 Aligned_cols=25 Identities=16% Similarity=0.250 Sum_probs=15.4
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHh
Q 015370 161 TALLHLYAGAKWTEKAEELFERVKQ 185 (408)
Q Consensus 161 ~~ll~~~~~~~~~~~A~~~~~~m~~ 185 (408)
..++.-|...++.++|...++++..
T Consensus 14 ~~ii~EYf~~~D~~Ea~~~l~eL~~ 38 (165)
T 2rg8_A 14 TPIIQEYFEHGDTNEVAEMLRDLNL 38 (165)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCCHHHHHHHHHHhCC
Confidence 4455566666666666666666553
No 350
>2p1h_A APAF-1, apoptotic protease-activating factor 1; folding, unfolding, apoptosis; 1.59A {Homo sapiens} SCOP: a.77.1.3 PDB: 1cww_A 1c15_A 1cy5_A 3ygs_C 2ygs_A
Probab=30.52 E-value=1.2e+02 Score=20.07 Aligned_cols=66 Identities=11% Similarity=0.167 Sum_probs=41.1
Q ss_pred HHHHHHHHHHcCCCCChhhHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHHHHH
Q 015370 72 ATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSGERY 146 (408)
Q Consensus 72 a~~~l~~~~~~g~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~ 146 (408)
+..+++.+.+.|+- +...+..+-. .....++|..+++.+...| ...|..++.++...+...-|..+
T Consensus 24 v~~lld~L~~~~vl-t~~~~e~I~~---~~t~~~kar~Lld~l~~kG-----~~af~~F~~aL~~~~~~~La~~L 89 (94)
T 2p1h_A 24 TSYIMDHMISDGFL-TISEEEKVRN---EPTQQQRAAMLIKMILKKD-----NDSYVSFYNALLHEGYKDLAALL 89 (94)
T ss_dssp HHHHHHHHHHHTSS-CHHHHHHHHT---SSSHHHHHHHHHHHHTTSC-----HHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHCCCC-CHHHHHHHHc---CCChHHHHHHHHHHHHHcC-----HHHHHHHHHHHHHcCHHHHHHHH
Confidence 56677777777654 3333333332 2466777777887777665 67777777777776665544433
No 351
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=30.30 E-value=1.8e+02 Score=22.23 Aligned_cols=23 Identities=9% Similarity=-0.231 Sum_probs=15.6
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHH
Q 015370 337 YICILSSYLMLGHLKEVGEIIDQ 359 (408)
Q Consensus 337 ~~~li~~~~~~g~~~~A~~~~~~ 359 (408)
|+.+...|.+.|+.++|+..+..
T Consensus 117 y~l~a~lltq~g~r~EaI~y~~~ 139 (242)
T 3kae_A 117 ESLLGDLCTLSGYREEGIGHYVR 139 (242)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHhhhHhhh
Confidence 45566666777777777777654
No 352
>3us6_A Histidine-containing phosphotransfer protein type MTHPT1; helix bundle, plant hormone signal transduction, cytokinin S transduction; 1.45A {Medicago truncatula}
Probab=29.92 E-value=1.7e+02 Score=21.66 Aligned_cols=22 Identities=18% Similarity=0.342 Sum_probs=11.4
Q ss_pred HHHHHhcCCHHHHHHHHHHHhc
Q 015370 234 ISSCAATLNIDQVKKFLDEMSC 255 (408)
Q Consensus 234 l~~~~~~g~~~~a~~~~~~~~~ 255 (408)
+..+++.|+.+.+...+..+..
T Consensus 100 lE~~~~~~~~~~~~~~l~~l~~ 121 (153)
T 3us6_A 100 FRNFCEEQNIDACRRCLQQVKQ 121 (153)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHH
Confidence 3444555555555555555544
No 353
>4ets_A Ferric uptake regulation protein; metal binding protein, transcription factor; 2.10A {Campylobacter jejuni subsp}
Probab=29.43 E-value=1.6e+02 Score=21.95 Aligned_cols=63 Identities=11% Similarity=0.026 Sum_probs=45.3
Q ss_pred HHHHHHcCCCCChhhHHHHHHHHHhcccHHHHHHHHHHHHhc--cCCCCChHHHHHHHHHHHhhcCh
Q 015370 76 IQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTH--KEFVLSDSDYATRIDLMTKVFGI 140 (408)
Q Consensus 76 l~~~~~~g~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~--~~~~~~~~~~~~li~~~~~~g~~ 140 (408)
-+.+.+.|.+++..- ..++..+...+..-.|.++++.+.+. + ...+..|.-.-++.+...|-+
T Consensus 21 ~~~L~~~g~r~T~qR-~~IL~~L~~~~~h~sA~eI~~~l~~~~~~-~~is~aTVYRtL~~L~e~Glv 85 (162)
T 4ets_A 21 KKILRQGGLKYTKQR-EVLLKTLYHSDTHYTPESLYMEIKQAEPD-LNVGIATVYRTLNLLEEAEMV 85 (162)
T ss_dssp HHHHHHHTCCCCHHH-HHHHHHHHSCCSCBCHHHHHHHHHHHCGG-GCCCHHHHHHHHHHHHHTTSE
T ss_pred HHHHHHcCCCCCHHH-HHHHHHHHhCCCCCCHHHHHHHHHhhcCC-CCCCHHHHHHHHHHHHHCCCE
Confidence 334667888887764 35677777777888899999999886 5 456666655557777777754
No 354
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=29.03 E-value=2e+02 Score=22.11 Aligned_cols=106 Identities=14% Similarity=0.053 Sum_probs=57.6
Q ss_pred HHHHHHH-HHHhhcChHHHHHHHhcCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHh
Q 015370 126 DYATRID-LMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMS 204 (408)
Q Consensus 126 ~~~~li~-~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~ 204 (408)
-|..|+. .+--+|.+..++-++..+.. .+..-|..| +|-+..++..|+..++.+....+..|+.+=.
T Consensus 34 eY~lL~~I~LyyngEY~R~Lf~L~~lNT--~Ts~YYk~L--Cy~klKdYkkA~~~le~il~~kvd~d~~~d~-------- 101 (242)
T 3kae_A 34 EYRMLMSIVLYLNGEYTRALFHLHKLNT--CTSKYYESL--CYKKKKDYKKAIKSLESILEGKVERDPDVDA-------- 101 (242)
T ss_dssp CTHHHHHHHHHHTTCHHHHHHHHHTCCB--HHHHHHHHH--HHHHTTCHHHHHHHHHHHHTTCSBCCCCCCH--------
T ss_pred HHHhhhhhhhhhcchHhHHHHHHHhcch--HHHHHHHHH--HHHHHHHHHHHHHHHHHHHhcccccCccccc--------
Confidence 4444443 33456777777777665542 122223332 4556677888888888877655442221100
Q ss_pred cCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 015370 205 VGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 253 (408)
Q Consensus 205 ~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~ 253 (408)
-++.|.-. .......|+.+...|...|+.++|+..+..-
T Consensus 102 ---------~~~~ffvd-~~DkEfFy~l~a~lltq~g~r~EaI~y~~~S 140 (242)
T 3kae_A 102 ---------RIQEMFVD-PGDEEFFESLLGDLCTLSGYREEGIGHYVRS 140 (242)
T ss_dssp ---------HHHTTSCC-TTCHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ---------ccceeeec-cchHHHHHHHHHHHHHHhcCHHHhhhHhhhh
Confidence 01111111 1112456666677778888888888877653
No 355
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A
Probab=28.81 E-value=2e+02 Score=22.54 Aligned_cols=10 Identities=20% Similarity=0.312 Sum_probs=4.4
Q ss_pred HHHHHHHHHH
Q 015370 105 KHALEISEWM 114 (408)
Q Consensus 105 ~~a~~~~~~~ 114 (408)
+++..++..+
T Consensus 87 ~~~~~l~~~~ 96 (220)
T 3sjs_A 87 QTALRMMRIF 96 (220)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 3444444444
No 356
>2xig_A Ferric uptake regulation protein; hpfur, transcription, homeostasis; HET: CIT; 1.85A {Helicobacter pylori}
Probab=28.78 E-value=1.7e+02 Score=21.42 Aligned_cols=47 Identities=13% Similarity=0.087 Sum_probs=29.6
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCH
Q 015370 304 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 350 (408)
Q Consensus 304 ~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~ 350 (408)
.++..+...+..-.|.++++.+.+.+...+..|.--.++.+...|-+
T Consensus 31 ~IL~~l~~~~~~~sa~ei~~~l~~~~~~is~aTVYR~L~~L~e~Glv 77 (150)
T 2xig_A 31 EVVSVLYRSGTHLSPEEITHSIRQKDKNTSISSVYRILNFLEKENFI 77 (150)
T ss_dssp HHHHHHHHCSSCBCHHHHHHHHHHHSTTCCHHHHHHHHHHHHHTTSE
T ss_pred HHHHHHHhCCCCCCHHHHHHHHHHhCCCCCHhhHHHHHHHHHHCCcE
Confidence 44555555556667777777777766666666655566666665543
No 357
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=28.75 E-value=74 Score=22.98 Aligned_cols=17 Identities=6% Similarity=-0.081 Sum_probs=8.5
Q ss_pred HHHhhcChHHHHHHHhc
Q 015370 133 LMTKVFGIHSGERYFEG 149 (408)
Q Consensus 133 ~~~~~g~~~~a~~~~~~ 149 (408)
..++.|+.+.+..+++.
T Consensus 8 ~A~~~g~~~~v~~ll~~ 24 (156)
T 1bd8_A 8 GAAARGDVQEVRRLLHR 24 (156)
T ss_dssp HHHHHTCHHHHHHHHHT
T ss_pred HHHHhCCHHHHHHHHHh
Confidence 33444555555555544
No 358
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Probab=28.70 E-value=1.4e+02 Score=22.02 Aligned_cols=10 Identities=10% Similarity=0.195 Sum_probs=4.2
Q ss_pred HHHHHHHHHH
Q 015370 174 EKAEELFERV 183 (408)
Q Consensus 174 ~~A~~~~~~m 183 (408)
+++..++..+
T Consensus 110 ~~~~~~~~~~ 119 (172)
T 2znd_A 110 QFHDILIRKF 119 (172)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 3444444443
No 359
>3eyy_A Putative iron uptake regulatory protein; NUR, nickel-uptake regulator, D-domain, dimerization domain, DB-domain, DNA-binding domain; 2.40A {Streptomyces coelicolor}
Probab=28.45 E-value=1.5e+02 Score=21.57 Aligned_cols=44 Identities=18% Similarity=0.126 Sum_probs=25.4
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCC
Q 015370 305 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGH 349 (408)
Q Consensus 305 li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~ 349 (408)
++..+...+ .-.|.++++.+.+.+...+..|.---++.+...|-
T Consensus 24 Il~~l~~~~-h~ta~ei~~~l~~~~~~is~~TVYR~L~~L~e~Gl 67 (145)
T 3eyy_A 24 VLEAVDTLE-HATPDDILGEVRKTASGINISTVYRTLELLEELGL 67 (145)
T ss_dssp HHHHHHHHS-SBCHHHHHHHHHTTCTTCCHHHHHHHHHHHHHHTS
T ss_pred HHHHHHhcC-CCCHHHHHHHHHhhCCCCCHhHHHHHHHHHHHCCc
Confidence 344444444 55677777777666655566665555555555553
No 360
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=28.17 E-value=57 Score=26.61 Aligned_cols=19 Identities=16% Similarity=0.198 Sum_probs=9.2
Q ss_pred HcCCCHHHHHHHHHHHHhC
Q 015370 168 AGAKWTEKAEELFERVKQS 186 (408)
Q Consensus 168 ~~~~~~~~A~~~~~~m~~~ 186 (408)
++.|+.+.+..+++...+.
T Consensus 21 ~~~g~~~~v~~Ll~~~~~~ 39 (273)
T 2pnn_A 21 VAQSNCQELESLLPFLQRS 39 (273)
T ss_dssp HHTTCSSTTTTHHHHHHHS
T ss_pred HHcCCHHHHHHHHHHHhhc
Confidence 3445555555555544433
No 361
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5
Probab=27.96 E-value=2e+02 Score=21.89 Aligned_cols=12 Identities=25% Similarity=0.130 Sum_probs=5.4
Q ss_pred hhHHHHHHHHHh
Q 015370 193 LMYNEMMTLYMS 204 (408)
Q Consensus 193 ~~~~~li~~~~~ 204 (408)
.+|.-++..+.+
T Consensus 165 Is~~Ef~~~~~~ 176 (204)
T 1jba_A 165 LSLNEFVEGARR 176 (204)
T ss_dssp BCHHHHHHHHTT
T ss_pred EcHHHHHHHHHc
Confidence 344444444433
No 362
>2nsz_A Programmed cell death protein 4; PDCD4, tumor suppressor, translation, antitumor protein; 1.15A {Mus musculus} SCOP: a.118.1.14 PDB: 2kzt_B 2hm8_A 2ggf_A
Probab=27.79 E-value=1.7e+02 Score=20.91 Aligned_cols=62 Identities=11% Similarity=0.082 Sum_probs=36.0
Q ss_pred HHHHHHHHHhhcChHHHHHHHhcCCCC-CCCHHHHHHHHHHHHcCCC--HHHHHHHHHHHHhCCC
Q 015370 127 YATRIDLMTKVFGIHSGERYFEGLPLS-AKTSETYTALLHLYAGAKW--TEKAEELFERVKQSNL 188 (408)
Q Consensus 127 ~~~li~~~~~~g~~~~a~~~~~~~~~~-~~~~~~~~~ll~~~~~~~~--~~~A~~~~~~m~~~~~ 188 (408)
...++.=|...|+.++|.+.++++... .....+...+..++-+.++ .+.+..++..+...|+
T Consensus 10 i~~ll~EY~~~~D~~Ea~~cl~eL~~p~f~~e~V~~~i~~alE~~~~~~~e~~~~LL~~L~~~~~ 74 (129)
T 2nsz_A 10 IDMLLKEYLLSGDISEAEHCLKELEVPHFHHELVYEAIVMVLESTGESAFKMILDLLKSLWKSST 74 (129)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHTCGGGHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHhCCCccHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHCCC
Confidence 345566666777777777777777531 1123444455555555432 3556667777776653
No 363
>3mwm_A ZUR, putative metal uptake regulation protein; FUR, regulatory metal, graded transcription regulation, transcription; 2.40A {Streptomyces coelicolor}
Probab=27.76 E-value=69 Score=23.29 Aligned_cols=47 Identities=9% Similarity=0.036 Sum_probs=32.7
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCH
Q 015370 304 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 350 (408)
Q Consensus 304 ~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~ 350 (408)
.++..+...+..-.|.++++.+.+.+...+..|.--.++.+...|-+
T Consensus 18 ~Il~~L~~~~~h~sa~eI~~~l~~~~~~is~aTVYR~L~~L~e~Glv 64 (139)
T 3mwm_A 18 AVSAALQEVEEFRSAQELHDMLKHKGDAVGLTTVYRTLQSLADAGEV 64 (139)
T ss_dssp HHHHHHTTCSSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTSS
T ss_pred HHHHHHHhCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHHHHCCCE
Confidence 45555556666777888888888777777777766667777766654
No 364
>3ctd_A Putative ATPase, AAA family; structural genomics, unknown function, PSI-2, protein structure initiative; 2.50A {Prochlorococcus marinus subsp} SCOP: a.80.1.2
Probab=26.77 E-value=2.4e+02 Score=22.32 Aligned_cols=71 Identities=13% Similarity=0.149 Sum_probs=43.5
Q ss_pred hhHHHHHHHHHh---cCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCC-----HHHHHHHHHHHhcCCCCCCCHH
Q 015370 193 LMYNEMMTLYMS---VGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN-----IDQVKKFLDEMSCDSGGSDDWV 264 (408)
Q Consensus 193 ~~~~~li~~~~~---~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~-----~~~a~~~~~~~~~~~~~~~~~~ 264 (408)
..+--+|+++.| -.+.+.|+-.+-+|.+.|-.|.-..-..++-+.-..|. ...|...++.... .|.+....
T Consensus 33 d~HYd~ISAf~KSiRGSDpDAALywLaRMl~~GEDp~~IaRRLvi~AsEDIGlAdP~Al~~a~aa~~a~~~-iG~PE~~i 111 (213)
T 3ctd_A 33 QNHFDVISAFIKSIRGSDPDATLYWLANMVEAGEDPNFIFRRLLISACEDIGLADPNAIVVVQSCCDAFDR-VGFPEGLF 111 (213)
T ss_dssp -CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHTTGGGSTTHHHHHHHHHHHHHH-HCTTTTHH
T ss_pred hHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHH-hCCCHHHH
Confidence 344456666654 46788888888888888877777776766766666554 2234444444444 35544333
No 365
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Probab=26.35 E-value=1.9e+02 Score=21.20 Aligned_cols=15 Identities=27% Similarity=0.481 Sum_probs=8.1
Q ss_pred CCCChhhHHHHHHHH
Q 015370 84 NQATVSELRHILKEL 98 (408)
Q Consensus 84 ~~~~~~~~~~li~~~ 98 (408)
...+...+..++..+
T Consensus 18 G~i~~~el~~~l~~~ 32 (173)
T 1alv_A 18 MEVSATELMNILNKV 32 (173)
T ss_dssp TSBCHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHh
Confidence 445555555555554
No 366
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=26.16 E-value=2.2e+02 Score=22.14 Aligned_cols=16 Identities=13% Similarity=-0.190 Sum_probs=7.1
Q ss_pred hcCChHHHHHHHHHHH
Q 015370 382 DVGLTEKANEFHMLLL 397 (408)
Q Consensus 382 ~~g~~~~a~~~~~~m~ 397 (408)
..|+.+.++++.+.+.
T Consensus 219 ~~~~~~~~~~l~~~l~ 234 (237)
T 3b7b_A 219 LNSQVWSALQMSKALQ 234 (237)
T ss_dssp TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhh
Confidence 3444444444444443
No 367
>2keb_A DNA polymerase subunit alpha B; DNA polymerase alpha, DNA replication, nucleus, phosphoprote binding protein; HET: DNA; NMR {Homo sapiens}
Probab=25.87 E-value=1.6e+02 Score=19.97 Aligned_cols=62 Identities=6% Similarity=0.003 Sum_probs=43.4
Q ss_pred CCCCcHHHHHHHHHHcCCCCChhhHHHHHHHHHhcccHHHHHHHHH-HH---HhccCCCCChHHHHHH
Q 015370 67 LPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISE-WM---VTHKEFVLSDSDYATR 130 (408)
Q Consensus 67 ~~~~~a~~~l~~~~~~g~~~~~~~~~~li~~~~~~~~~~~a~~~~~-~~---~~~~~~~~~~~~~~~l 130 (408)
....++.++.+++..-|+.|+..+...++..|...+- + +.++.+ || ...++..|+..+.+.+
T Consensus 23 ~~~Vsae~L~eEfdefGi~~~d~VldKc~ELC~~y~l-d-a~e~VeeWmAFsts~~g~~pT~enL~~F 88 (101)
T 2keb_A 23 SMSASAQQLAEELQIFGLDCEEALIEKLVELCVQYGQ-N-EEGMVGELIAFCTSTHKVGLTSEILNSF 88 (101)
T ss_dssp -CCCCHHHHHHHHHHHTCBCCHHHHHHHHHHHHHHTC-C-HHHHHHHHHHHHHHHTCSBCCHHHHHHH
T ss_pred hhhccHHHHHHHHHHcCCCCCHHHHHHHHHHHHHcCC-C-HHHHHHHHHHHHHhcCCCCCCHHHHHHH
Confidence 4557889999999999999999999999998888774 2 333222 22 1233478888776654
No 368
>3e3v_A Regulatory protein RECX; PSI-II, NYSGXRC, structural genomics, protein initiative; 2.04A {Lactobacillus salivarius}
Probab=25.82 E-value=2.2e+02 Score=21.64 Aligned_cols=13 Identities=15% Similarity=0.388 Sum_probs=5.4
Q ss_pred HHHHHHHHHhCCC
Q 015370 176 AEELFERVKQSNL 188 (408)
Q Consensus 176 A~~~~~~m~~~~~ 188 (408)
+..+++.+.+.|+
T Consensus 52 ie~vl~~L~~~g~ 64 (177)
T 3e3v_A 52 ISEIINKLIDLDL 64 (177)
T ss_dssp HHHHHHHHHHTTS
T ss_pred HHHHHHHHHHcCC
Confidence 3334444444443
No 369
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=25.65 E-value=1.1e+02 Score=24.40 Aligned_cols=19 Identities=16% Similarity=-0.045 Sum_probs=11.2
Q ss_pred HHHHHHhcCCHHHHHHHHH
Q 015370 340 ILSSYLMLGHLKEVGEIID 358 (408)
Q Consensus 340 li~~~~~~g~~~~A~~~~~ 358 (408)
.+...+..|+.+-+..+++
T Consensus 143 pL~~A~~~g~~~~v~~Ll~ 161 (260)
T 3jxi_A 143 PLSLAACTNQPHIVHYLTE 161 (260)
T ss_dssp HHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHh
Confidence 4444556777766655555
No 370
>1zl8_A LIN-7; heterodimer, alpha helix, scaffold, assembly, specifici signaling, protein binding; NMR {Caenorhabditis elegans} SCOP: a.194.1.1
Probab=25.32 E-value=37 Score=19.58 Aligned_cols=20 Identities=20% Similarity=0.267 Sum_probs=16.1
Q ss_pred cccHHHHHHHHHHHHhccCC
Q 015370 101 SQRYKHALEISEWMVTHKEF 120 (408)
Q Consensus 101 ~~~~~~a~~~~~~~~~~~~~ 120 (408)
.+++..|+++++.+.+.|.+
T Consensus 6 ~RDv~RaiELle~lq~sgev 25 (53)
T 1zl8_A 6 ERDVQRILELMEHVQKTGEV 25 (53)
T ss_dssp HHHHHHHHHHHHHHGGGSSS
T ss_pred HHHHHHHHHHHHHHHHcCCC
Confidence 35788999999999888843
No 371
>4fke_A Aminopeptidase N; zinc aminopeptidase, hydrolase; HET: NAG; 1.85A {Sus scrofa} PDB: 4fkh_A* 4fkk_A* 4fkn_A* 4fkf_A* 4f5c_A* 4fyt_A* 4fyr_A* 4fys_A* 4fyq_A*
Probab=25.21 E-value=5.2e+02 Score=25.79 Aligned_cols=183 Identities=8% Similarity=-0.096 Sum_probs=0.0
Q ss_pred HHHHHHHHhcccHH---HHHHHHHHHHhcc-CCCCChHHHHHHHHHHHhhcChHHHHHHHhcCCCCCCCHHHHHHHHHHH
Q 015370 92 RHILKELRKSQRYK---HALEISEWMVTHK-EFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLY 167 (408)
Q Consensus 92 ~~li~~~~~~~~~~---~a~~~~~~~~~~~-~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~ll~~~ 167 (408)
..++...|..|..+ .|.+.|+.....+ .....+..-........+.|..++-..+++.... ..+..--..++.++
T Consensus 690 ~~~l~~ac~~g~~~c~~~a~~~f~~~~~~~~~~~i~~dlr~~vy~~~~~~g~~~~~~~l~~~~~~-~~~~~ek~~ll~aL 768 (909)
T 4fke_A 690 INAISTACSNGLPQCENLAKTLFDQWMSDPENNPIHPNLRSTIYCNAIAQGGQDQWDFAWGQLQQ-AQLVNEADKLRSAL 768 (909)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHTCTTSCCSCTTTHHHHHHHHHHHSCHHHHHHHHHHHHH-CCSHHHHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHhhCCCCCcCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHc-cCCHHHHHHHHHHh
Q ss_pred HcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCCHHHHHHHHHH---HHhCCCCCCHHHHHHHHHHHHhcCCHH
Q 015370 168 AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE---IKRKNVVPDIFTYNLWISSCAATLNID 244 (408)
Q Consensus 168 ~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~a~~~~~~---m~~~g~~p~~~~~~~ll~~~~~~g~~~ 244 (408)
+...+.+...++++.....+..........+..........+.|.+.+.+ ........+...+..++......-.-+
T Consensus 769 ~~~~d~~~l~~~L~~~l~~~~ir~qd~~~~~~~v~~n~~g~~~~~~f~~~n~~~l~~~~~~~~~~~~~~i~~~~~~~~t~ 848 (909)
T 4fke_A 769 ACSNEVWLLNRYLGYTLNPDLIRKQDATSTINSIASNVIGQPLAWDFVQSNWKKLFQDYGGGSFSFSNLIQGVTRRFSSE 848 (909)
T ss_dssp TTCCCHHHHHHHHHHTTCTTTSCGGGHHHHHHHHHHSTTHHHHHHHHHHHHCTTTTTSSSSCCCCHHHHHHHHHTTCCSH
T ss_pred CCCCCHHHHHHHHHHHhCCCCCchhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHhcCCH
Q ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHH
Q 015370 245 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 275 (408)
Q Consensus 245 ~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~ 275 (408)
+-.+-++...+......-.....++-.+.-+
T Consensus 849 ~~~~~~~~f~~~~~~~~~~~~~~~~~~~le~ 879 (909)
T 4fke_A 849 FELQQLEQFKKNNMDVGFGSGTRALEQALEK 879 (909)
T ss_dssp HHHHHHHHHHTTCSSSCCGGGTTHHHHHHHH
T ss_pred HHHHHHHHHHhhCCccccchHHHHHHHHHHH
No 372
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=24.89 E-value=1.6e+02 Score=21.74 Aligned_cols=150 Identities=13% Similarity=0.006 Sum_probs=73.0
Q ss_pred HHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccc---hHHHHHHHHHh
Q 015370 235 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI---TYDFLIILYAG 311 (408)
Q Consensus 235 ~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~---~~~~li~~~~~ 311 (408)
...+..|+.+.+..+++.-... -...+...+ +.+...+..|+.+-+.. +.+.+..++.. -.+.| ...+.
T Consensus 10 ~~A~~~g~~~~v~~ll~~~~~~-~~~~~~~g~-t~L~~A~~~~~~~~v~~-----Ll~~g~~~~~~~~~g~t~L-~~A~~ 81 (179)
T 3f6q_A 10 FTQCREGNAVAVRLWLDNTEND-LNQGDDHGF-SPLHWACREGRSAVVEM-----LIMRGARINVMNRGDDTPL-HLAAS 81 (179)
T ss_dssp HHHHHHTCHHHHHHHHHCTTSC-TTCCCTTSC-CHHHHHHHTTCHHHHHH-----HHHTTCCTTCCCTTCCCHH-HHHHH
T ss_pred HHHHHcCCHHHHHHHHhcCccc-ccccCCCCC-CHHHHHHHcCcHHHHHH-----HHHcCCCCCCcCCCCCCHH-HHHHH
Confidence 3446678888887777653321 112222222 34555566777655444 33445444422 22233 33345
Q ss_pred cCCHHHHHHHHHHHHhccCCCChhhH--HHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCCH---HHHHHHHHHHHhcCCh
Q 015370 312 LGNKDKIDQIWKSLRMTKQKMTSRNY--ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDI---SACNRLLGAFSDVGLT 386 (408)
Q Consensus 312 ~~~~~~a~~~~~~m~~~~~~p~~~~~--~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~~~---~~~~~li~~~~~~g~~ 386 (408)
.|+.+-+.. +.+.|..++.... ...+...+..|+.+-+..+++. | ..++. .-.+.+-.+ . .
T Consensus 82 ~~~~~~v~~----Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~----g-a~~~~~~~~g~tpl~~A-~----~ 147 (179)
T 3f6q_A 82 HGHRDIVQK----LLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVAN----G-ALVSICNKYGEMPVDKA-K----A 147 (179)
T ss_dssp TTCHHHHHH----HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT----T-CCSSBCCTTSCCGGGGS-C----H
T ss_pred cCCHHHHHH----HHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHC----C-CCcchhccCCCCcHHHH-H----H
Confidence 666654443 4455665544321 1234445566777655555443 3 22221 111111111 1 1
Q ss_pred HHHHHHHHHHHhcCCCCCCC
Q 015370 387 EKANEFHMLLLQKNCAPTNA 406 (408)
Q Consensus 387 ~~a~~~~~~m~~~g~~p~~~ 406 (408)
..-..+.+.+.+.|..|+..
T Consensus 148 ~~~~~~~~~L~~~g~~~~~~ 167 (179)
T 3f6q_A 148 PLRELLRERAEKMGQNLNRI 167 (179)
T ss_dssp HHHHHHHHHHHHTTCCCSCB
T ss_pred HHHHHHHHHHHHhhcCcccC
Confidence 23356777788888777654
No 373
>3bu8_A Telomeric repeat-binding factor 2; TRF2 TRFH domain TRF2 dimerization domain TIN2 peptide, alternative splicing, cell cycle, chromosomal protein; 2.15A {Homo sapiens} SCOP: a.146.1.1 PDB: 3bua_A* 1h6p_A
Probab=24.75 E-value=2.6e+02 Score=22.19 Aligned_cols=21 Identities=14% Similarity=0.298 Sum_probs=13.7
Q ss_pred HHHHhcCCHHHHHHHHHHHhc
Q 015370 235 SSCAATLNIDQVKKFLDEMSC 255 (408)
Q Consensus 235 ~~~~~~g~~~~a~~~~~~~~~ 255 (408)
-.|.+.|.+++|.+++++...
T Consensus 122 ~VCiek~~f~kA~eiLkr~~~ 142 (235)
T 3bu8_A 122 IICIKNKEFEKASKILKKHMS 142 (235)
T ss_dssp HHHHHTTCHHHHHHHHHHHST
T ss_pred HHHHHhcchHHHHHHHHHHhc
Confidence 346666777777777766655
No 374
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=24.29 E-value=2.3e+02 Score=21.40 Aligned_cols=175 Identities=9% Similarity=-0.020 Sum_probs=0.0
Q ss_pred CCChHHHHHHHHHHHhhcChHHHHHHHhcCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCCCCCChhhHHHHHH
Q 015370 121 VLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMT 200 (408)
Q Consensus 121 ~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~ 200 (408)
.++...-...+.++.+.+..+....+.+.+.. ++..+-...+.++.+.+..+....+...+.+. +...-...+.
T Consensus 25 ~~~~~vr~~A~~~L~~~~~~~~~~~L~~~l~~--~~~~vr~~a~~~L~~~~~~~~~~~L~~~l~d~----~~~vr~~a~~ 98 (201)
T 3ltj_A 25 DDSYYVRRAAAYALGKIGDERAVEPLIKALKD--EDAWVRRAAADALGQIGDERAVEPLIKALKDE----DGWVRQSAAV 98 (201)
T ss_dssp CSCHHHHHHHHHHHHHHCCGGGHHHHHHHTTC--SSHHHHHHHHHHHHHHCCGGGHHHHHHHTTCS----SHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCChhHHHHHHHHHcC--CCHHHHHHHHHHHHhhCCHHHHHHHHHHHcCC----CHHHHHHHHH
Q ss_pred HHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchh
Q 015370 201 LYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLV 280 (408)
Q Consensus 201 ~~~~~g~~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~ 280 (408)
++.+.++.+....+.+.+.. ++...-...+.++.+.++.+....+.+.+.+ ++..+-...+.++.+.|. .
T Consensus 99 aL~~~~~~~~~~~L~~~l~d----~~~~vr~~a~~aL~~~~~~~~~~~L~~~l~d-----~~~~vr~~A~~aL~~~~~-~ 168 (201)
T 3ltj_A 99 ALGQIGDERAVEPLIKALKD----EDWFVRIAAAFALGEIGDERAVEPLIKALKD-----EDGWVRQSAADALGEIGG-E 168 (201)
T ss_dssp HHHHHCCGGGHHHHHHHTTC----SSHHHHHHHHHHHHHHTCGGGHHHHHHHTTC-----SSHHHHHHHHHHHHHHCS-H
T ss_pred HHHHhCcHHHHHHHHHHHcC----CCHHHHHHHHHHHHHhCCHHHHHHHHHHHcC-----CCHHHHHHHHHHHHHhCc-h
Q ss_pred hhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCH
Q 015370 281 NAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 315 (408)
Q Consensus 281 ~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~ 315 (408)
++.. .+..+... ++...-...+.++.+.+..
T Consensus 169 ~~~~-~L~~~l~d---~~~~vr~~A~~aL~~l~~~ 199 (201)
T 3ltj_A 169 RVRA-AMEKLAET---GTGFARKVAVNYLETHKSL 199 (201)
T ss_dssp HHHH-HHHHHHHH---CCHHHHHHHHHHHHHCC--
T ss_pred hHHH-HHHHHHhC---CCHHHHHHHHHHHHHHHhh
No 375
>2o03_A Probable zinc uptake regulation protein FURB; DNA-binding, helix-turn-helix, zinc binding, GE regulation; 2.70A {Mycobacterium tuberculosis}
Probab=24.23 E-value=1.1e+02 Score=21.90 Aligned_cols=33 Identities=15% Similarity=0.151 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhc
Q 015370 208 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 240 (408)
Q Consensus 208 ~~~a~~~~~~m~~~g~~p~~~~~~~ll~~~~~~ 240 (408)
.-.|.++++.+.+.+...+..|..-.|+.+...
T Consensus 26 ~~sa~ei~~~l~~~~~~is~~TVYR~L~~L~e~ 58 (131)
T 2o03_A 26 FRSAQELHDELRRRGENIGLTTVYRTLQSMASS 58 (131)
T ss_dssp CEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHhCCCCCHhhHHHHHHHHHHC
Confidence 334444444444443333333333333333333
No 376
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=24.13 E-value=78 Score=19.08 Aligned_cols=20 Identities=5% Similarity=-0.115 Sum_probs=10.3
Q ss_pred CCHHHHHHHHHHHHhCCCCC
Q 015370 171 KWTEKAEELFERVKQSNLSF 190 (408)
Q Consensus 171 ~~~~~A~~~~~~m~~~~~~p 190 (408)
|+++.|+..+-+|...+..|
T Consensus 37 gdvd~aI~~LL~m~~~~~~~ 56 (59)
T 1wgl_A 37 GNKDAAINSLLQMGEEPSGP 56 (59)
T ss_dssp TCHHHHHHHHHHSSCCCCSC
T ss_pred CCHHHHHHHHHcCcCCCCCC
Confidence 45555555555555444444
No 377
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A
Probab=24.06 E-value=93 Score=23.97 Aligned_cols=8 Identities=13% Similarity=0.011 Sum_probs=3.4
Q ss_pred HHHHHHHH
Q 015370 107 ALEISEWM 114 (408)
Q Consensus 107 a~~~~~~~ 114 (408)
...+|..+
T Consensus 73 ~~~~f~~~ 80 (207)
T 2d8n_A 73 AQHVFRSF 80 (207)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 33444444
No 378
>2r9g_A AAA ATPase, central region; structural genomics, PSI-2, protein structure initia YORK SGX research center for structural genomics, nysgxrc; 2.09A {Enterococcus faecium} SCOP: a.80.1.2 PDB: 2qw6_A
Probab=23.64 E-value=2.7e+02 Score=21.84 Aligned_cols=62 Identities=10% Similarity=0.177 Sum_probs=37.5
Q ss_pred HHHHHHHH---cCCCHHHHHHHHHHHHhCCCCCChhhHHHHHHHHHhcCC-----HHHHHHHHHHHHhCCC
Q 015370 161 TALLHLYA---GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ-----VEKVALVVEEIKRKNV 223 (408)
Q Consensus 161 ~~ll~~~~---~~~~~~~A~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~-----~~~a~~~~~~m~~~g~ 223 (408)
-.+|+++. +-.+.+.|+-.+.+|++.| .|....-..++.+.-.-|. ...|...++....-|.
T Consensus 15 Yd~iSAf~KSiRGSDpDAAly~LaRml~~G-Dp~~IaRRLvi~AsEDIGlAdP~Al~~a~aa~~a~~~iG~ 84 (204)
T 2r9g_A 15 YDVISAFQKSIRGSDVDAALHYLARLVEAG-DLASICRRLMVIGYEDIGLGNPAAAARTVNAVLAAEKLGL 84 (204)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHTTGGGCHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHhCC
Confidence 33455554 4578999999999999999 6655555555555544443 2233444444444444
No 379
>3f3f_C Nucleoporin NUP85; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_C 3f3p_C 3ewe_B
Probab=22.27 E-value=4e+02 Score=24.86 Aligned_cols=74 Identities=8% Similarity=-0.081 Sum_probs=26.2
Q ss_pred CCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHhcccCccchHHHHHHHHHhcCCHHHH
Q 015370 241 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKI 318 (408)
Q Consensus 241 g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a 318 (408)
.+.+.......++..+..+. +..-..-++..|.+.|-.+.|.+ +.+.+..+... +...+ .-+..|.++|+++.+
T Consensus 495 ~~~~~gr~~IselLpr~Pl~-Tndd~e~vL~iCa~l~L~~~ar~-I~k~~g~k~l~-~g~~g-eAL~~f~rA~~~~~V 568 (570)
T 3f3f_C 495 GTRSAKKMVIAELLPHYPFV-TNDDIEWMLSICVEWRLPEIAKE-IYTTLGNQMLS-AHNII-ESIANFSRAGKYELV 568 (570)
T ss_dssp SCHHHHHHHHHHHGGGCCCC-SHHHHHHHHHHHHHHTCHHHHHH-HHHHHHC--------------------------
T ss_pred cchhHHHHHHHHHhccCCCC-CHHHHHHHHHHHHHCCChHHHHH-HHHHHHHHHHH-CccHH-HHHHHHHHcCChhhc
Confidence 34444555555555532222 22334556666666666666666 56555544433 23333 334455666665544
No 380
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=22.22 E-value=2.7e+02 Score=21.44 Aligned_cols=19 Identities=11% Similarity=-0.085 Sum_probs=12.0
Q ss_pred HHHHHcCCCHHHHHHHHHH
Q 015370 164 LHLYAGAKWTEKAEELFER 182 (408)
Q Consensus 164 l~~~~~~~~~~~A~~~~~~ 182 (408)
+...++.|+++....+++.
T Consensus 10 l~~A~~~g~~~~v~~ll~~ 28 (231)
T 3aji_A 10 ICNLAYSGKLDELKERILA 28 (231)
T ss_dssp HHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHh
Confidence 4455666777776666654
No 381
>3mwm_A ZUR, putative metal uptake regulation protein; FUR, regulatory metal, graded transcription regulation, transcription; 2.40A {Streptomyces coelicolor}
Probab=21.91 E-value=95 Score=22.51 Aligned_cols=43 Identities=7% Similarity=0.091 Sum_probs=16.8
Q ss_pred HHHHhcCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCc
Q 015370 235 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 278 (408)
Q Consensus 235 ~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~ 278 (408)
..+...++.-.|.++++.+.+. +...+..|.---+..+...|-
T Consensus 21 ~~L~~~~~h~sa~eI~~~l~~~-~~~is~aTVYR~L~~L~e~Gl 63 (139)
T 3mwm_A 21 AALQEVEEFRSAQELHDMLKHK-GDAVGLTTVYRTLQSLADAGE 63 (139)
T ss_dssp HHHTTCSSCEEHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHTTS
T ss_pred HHHHhCCCCCCHHHHHHHHHHh-CCCCCHHHHHHHHHHHHHCCC
Confidence 3333333333444444444432 223333333333344444443
No 382
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=21.71 E-value=2.7e+02 Score=21.33 Aligned_cols=22 Identities=14% Similarity=-0.019 Sum_probs=11.6
Q ss_pred HHhcCChHHHHHHHHHHHhcCCCCCC
Q 015370 380 FSDVGLTEKANEFHMLLLQKNCAPTN 405 (408)
Q Consensus 380 ~~~~g~~~~a~~~~~~m~~~g~~p~~ 405 (408)
..+.|+. ++++.+.+.|..+++
T Consensus 198 A~~~~~~----~i~~~L~~~g~~~~~ 219 (223)
T 2f8y_A 198 AQERMHH----DIVRLLDEYNLVRSP 219 (223)
T ss_dssp HHHTTCH----HHHHHHHHTTCSSCC
T ss_pred HHHhcch----HHHHHHHHcCCCccc
Confidence 3444543 345555666665554
No 383
>1ixm_A SPO0B, protein (sporulation response regulatory protein); phosphotransferase, two component system; 2.60A {Bacillus subtilis} SCOP: d.123.1.1 PDB: 2ftk_A* 1f51_A
Probab=21.64 E-value=1.6e+02 Score=22.87 Aligned_cols=49 Identities=10% Similarity=-0.079 Sum_probs=29.1
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHH
Q 015370 303 DFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW 360 (408)
Q Consensus 303 ~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~ 360 (408)
-.+|.++...|++++|.++...+...- ..... ..+.++..-|--++.+.
T Consensus 36 LqvI~GLlql~~ydea~~yI~~~~~~~--------q~~~~-~~~i~~P~la~lLl~K~ 84 (192)
T 1ixm_A 36 LQLIKGNLSLQKYDRVFEMIEEMVIDA--------KHESK-LSNLKTPHLAFDFLTFN 84 (192)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHH--------HHHHH-HHTTTCHHHHHHHHHGG
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHH--------HHHHH-HHhCCCHHHHHHHHHHH
Confidence 356777888888888888877664421 11122 44566666555555543
No 384
>2bbr_A Viral CAsp8 and FADD-like apoptosis regulator; viral protein; 1.20A {Molluscum contagiosum virus subtype 1} PDB: 2f1s_A
Probab=21.55 E-value=2.9e+02 Score=21.50 Aligned_cols=39 Identities=8% Similarity=0.081 Sum_probs=21.5
Q ss_pred HHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHH
Q 015370 317 KIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 356 (408)
Q Consensus 317 ~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~ 356 (408)
.+.++|..|.+.+. .++.-...+-..+...++.+-+..+
T Consensus 135 s~ldlf~~LEk~~~-l~~~nL~~L~~iL~~I~R~DL~~~i 173 (195)
T 2bbr_A 135 RFVELVLALENVGL-VSPSSVSVLADMLRTLRRLDLCQQL 173 (195)
T ss_dssp CHHHHHHHHHHTTS-CBTTBCHHHHHHHHHTTCHHHHHHH
T ss_pred CHHHHHHHHHhhCC-CCchhHHHHHHHHHHcChHHHHHHH
Confidence 56667766666653 3444444455555555655555444
No 385
>3l6a_A Eukaryotic translation initiation factor 4 gamma; C-terminal region, MA2 domain, W2 domain, EIF4G2, EIF family translation; HET: MES PG4; 2.00A {Homo sapiens}
Probab=21.37 E-value=4e+02 Score=23.09 Aligned_cols=59 Identities=12% Similarity=0.012 Sum_probs=32.1
Q ss_pred HHHHHHHHHhhcChHHHHHHHhcCCCCCCC----HHHHHHHHHHHHcCCC-HHHHHHHHHHHHhCC
Q 015370 127 YATRIDLMTKVFGIHSGERYFEGLPLSAKT----SETYTALLHLYAGAKW-TEKAEELFERVKQSN 187 (408)
Q Consensus 127 ~~~li~~~~~~g~~~~a~~~~~~~~~~~~~----~~~~~~ll~~~~~~~~-~~~A~~~~~~m~~~~ 187 (408)
...++.=|...|+.++|.+.++++.. |+ ..++..+..++-+... -+.+-.++..+...+
T Consensus 15 ~~~ii~EY~~~~D~~Ea~~~l~eL~~--p~~~~~~~v~~~i~~aLer~~~~re~~~~LL~~L~~~~ 78 (364)
T 3l6a_A 15 TETVVTEYLNSGNANEAVNGVREMRA--PKHFLPEMLSKVIILSLDRSDEDKEKASSLISLLKQEG 78 (364)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHTC--CGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHhCC--chhhHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHCC
Confidence 45667777777788888887777764 32 2333333333333211 233445555555554
No 386
>2ko4_A Mediator of RNA polymerase II transcription subun; GAL11, mediator, activator, CO-activator, MED15, trans nucleus, phosphoprotein, transcription regulation; NMR {Saccharomyces cerevisiae} PDB: 2lpb_A
Probab=21.34 E-value=96 Score=19.95 Aligned_cols=38 Identities=13% Similarity=0.138 Sum_probs=20.7
Q ss_pred HHHhcCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHH
Q 015370 145 RYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFER 182 (408)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~A~~~~~~ 182 (408)
.++++++..+|++.||+-+...+-+..-..++..+..+
T Consensus 24 ~LL~kIPnLPpgVnTW~qI~el~qkk~i~~~~m~iik~ 61 (81)
T 2ko4_A 24 QLLQRIPNIPPNINTWQQVTALAQQKLLTPQDMEAAKE 61 (81)
T ss_dssp HHHTTSSSCCTTTCBHHHHHHHHTTTSSCHHHHHHHHH
T ss_pred HHHhhCCCCCCCcchHHHHHHHHHcCCCCHHHHHHHHH
Confidence 45556665566666666666655554444444444433
No 387
>3f3f_C Nucleoporin NUP85; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_C 3f3p_C 3ewe_B
Probab=21.14 E-value=1.3e+02 Score=27.93 Aligned_cols=87 Identities=16% Similarity=0.046 Sum_probs=41.5
Q ss_pred chHHHHHHHHHh--cCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHhhCCCCCCHHHHHHHH
Q 015370 300 ITYDFLIILYAG--LGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLL 377 (408)
Q Consensus 300 ~~~~~li~~~~~--~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~li 377 (408)
..|..-|..+.. ..+.....+..+++..+=.--+..-..-++..|.+.|-.+.|.++++.+-.+- . -+-..| .-+
T Consensus 480 sLW~vgI~yL~~~~~~~~~~gr~~IselLpr~Pl~Tndd~e~vL~iCa~l~L~~~ar~I~k~~g~k~-l-~~g~~g-eAL 556 (570)
T 3f3f_C 480 ELWPVAIGLIALSATGTRSAKKMVIAELLPHYPFVTNDDIEWMLSICVEWRLPEIAKEIYTTLGNQM-L-SAHNII-ESI 556 (570)
T ss_dssp TTHHHHHHHHHHCSSSCHHHHHHHHHHHGGGCCCCSHHHHHHHHHHHHHHTCHHHHHHHHHHHHC---------------
T ss_pred cchhHHHHHHhcCCccchhHHHHHHHHHhccCCCCCHHHHHHHHHHHHHCCChHHHHHHHHHHHHHH-H-HCccHH-HHH
Confidence 344444444443 34555666666666654222244556778999999999999999999887653 2 244456 455
Q ss_pred HHHHhcCChHHH
Q 015370 378 GAFSDVGLTEKA 389 (408)
Q Consensus 378 ~~~~~~g~~~~a 389 (408)
..|.|+|+++.+
T Consensus 557 ~~f~rA~~~~~V 568 (570)
T 3f3f_C 557 ANFSRAGKYELV 568 (570)
T ss_dssp ------------
T ss_pred HHHHHcCChhhc
Confidence 678899988764
No 388
>4fjo_A DNA repair protein REV1; translesion synthesis, transferase -DNA binding protein COMP transferase-DNA binding protein complex; HET: DNA; 2.72A {Mus musculus} PDB: 2lsg_A* 2lsk_A* 2lsy_A*
Probab=20.75 E-value=2e+02 Score=19.33 Aligned_cols=46 Identities=7% Similarity=0.229 Sum_probs=30.0
Q ss_pred CcHHHHHHHHHHcCCCCChh---hHHHHHHHHHhcccHHHHHHHHHHHH
Q 015370 70 RSATNVIQRWVSEGNQATVS---ELRHILKELRKSQRYKHALEISEWMV 115 (408)
Q Consensus 70 ~~a~~~l~~~~~~g~~~~~~---~~~~li~~~~~~~~~~~a~~~~~~~~ 115 (408)
++...+++.|.....-|... .+...+..+...++.+++..++..+.
T Consensus 12 ~dvr~~l~~Wv~~~~~P~~~DV~~l~~yL~~lv~~~~lek~~~vlk~l~ 60 (97)
T 4fjo_A 12 SDVKTLLKEWITTISDPMEEDILQVVRYCTDLIEEKDLEKLDLVIKYMK 60 (97)
T ss_dssp HHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhhccCHHHHHHHHHHHH
Confidence 34566777788776666544 44445555666778888877766654
No 389
>2p22_A Suppressor protein STP22 of temperature- sensitive alpha-factor receptor and arginine...; endosome, trafficking complex, VPS23, VPS28, VPS37, MVB12; 2.70A {Saccharomyces cerevisiae} PDB: 2caz_A
Probab=20.53 E-value=2.7e+02 Score=21.21 Aligned_cols=56 Identities=7% Similarity=0.061 Sum_probs=43.1
Q ss_pred CChhhHHHHHHHHHhcccHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcChHHH
Q 015370 86 ATVSELRHILKELRKSQRYKHALEISEWMVTHKEFVLSDSDYATRIDLMTKVFGIHSG 143 (408)
Q Consensus 86 ~~~~~~~~li~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a 143 (408)
|....++.++..++...-.+.++-.+.+....| ..+..+|-.-++.+++..-+..|
T Consensus 109 ~~~~l~~Qll~l~Aed~AieDaIy~L~~al~~g--~I~ld~ylK~vR~LaReQF~~ra 164 (174)
T 2p22_A 109 AKTDGLNQLYNLVAQDYALTDTIECLSRMLHRG--TIPLDTFVKQGRELARQQFLVRW 164 (174)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--SSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH
Confidence 444567889999999989999999999999988 57777887777777765444433
No 390
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=20.38 E-value=2.9e+02 Score=21.05 Aligned_cols=60 Identities=7% Similarity=0.054 Sum_probs=26.1
Q ss_pred ccchHHHHHHHHHhcCCHHHHHHHHHHHHhccCCCChhhHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 015370 298 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ 362 (408)
Q Consensus 298 ~~~~~~~li~~~~~~~~~~~a~~~~~~m~~~~~~p~~~~~~~li~~~~~~g~~~~A~~~~~~~~~ 362 (408)
+...-...+.++.+.++.+ +...+..+.. .++...-...+.++.+.+. .++...+.++.+
T Consensus 125 ~~~vr~~a~~aL~~~~~~~-~~~~L~~~l~---d~~~~vr~~a~~aL~~~~~-~~~~~~L~~~l~ 184 (211)
T 3ltm_A 125 DWFVRIAAAFALGEIGDER-AVEPLIKALK---DEDGWVRQSAADALGEIGG-ERVRAAMEKLAE 184 (211)
T ss_dssp SHHHHHHHHHHHHHHCCGG-GHHHHHHHTT---CSSHHHHHHHHHHHHHHCS-HHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHH-HHHHHHHHHc---CCCHHHHHHHHHHHHHhCc-hhHHHHHHHHHh
Confidence 3333344444555555433 2223332322 2344444445555555554 344444444444
No 391
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Probab=20.36 E-value=2.7e+02 Score=20.69 Aligned_cols=31 Identities=16% Similarity=0.313 Sum_probs=14.4
Q ss_pred CCCcHHHHHHHHHHc--CCCCChhhHHHHHHHH
Q 015370 68 PKRSATNVIQRWVSE--GNQATVSELRHILKEL 98 (408)
Q Consensus 68 ~~~~a~~~l~~~~~~--g~~~~~~~~~~li~~~ 98 (408)
......++++.+... ....+...+..++..+
T Consensus 23 ~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~ 55 (190)
T 2l2e_A 23 DKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQF 55 (190)
T ss_dssp CSHHHHHHHHHHHHHSCCCEECHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHh
Confidence 333444555555443 2344555555555444
No 392
>2p1h_A APAF-1, apoptotic protease-activating factor 1; folding, unfolding, apoptosis; 1.59A {Homo sapiens} SCOP: a.77.1.3 PDB: 1cww_A 1c15_A 1cy5_A 3ygs_C 2ygs_A
Probab=20.30 E-value=1.9e+02 Score=18.97 Aligned_cols=10 Identities=0% Similarity=0.046 Sum_probs=3.9
Q ss_pred HHHHHHHhcC
Q 015370 141 HSGERYFEGL 150 (408)
Q Consensus 141 ~~a~~~~~~~ 150 (408)
+.|.++++.+
T Consensus 53 ~kar~Lld~l 62 (94)
T 2p1h_A 53 QRAAMLIKMI 62 (94)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3333333333
Done!