Your job contains 1 sequence.
>015371
MLVGREVNYSGRGRFSAADSCHVLSRYLPVNGPWKVDGMNSRVYTSQFSNDGSFFVAASQ
ESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQRFLVYASICAIVNIVDVGSSARE
SLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIP
AHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRR
DGRYFISNGKDQTTKLWDIRKMSSNTTDNSRLRDYDWDYRWMEYPSYARRLKHPHDQSLA
TYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDC
CWHPIYPMLISSSWDCNIVRWEIPGIGEAPLPKRRTVRARRFFGRALR
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 015371
(408 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2139335 - symbol:AT4G03020 "AT4G03020" species... 1516 1.7e-155 1
ZFIN|ZDB-GENE-050809-116 - symbol:dcaf11 "ddb1 and cul4 a... 787 3.0e-78 1
UNIPROTKB|F1SGL8 - symbol:DCAF11 "Uncharacterized protein... 781 1.3e-77 1
UNIPROTKB|Q8TEB1 - symbol:DCAF11 "DDB1- and CUL4-associat... 773 9.0e-77 1
UNIPROTKB|Q5R7H5 - symbol:DCAF11 "DDB1- and CUL4-associat... 772 1.1e-76 1
MGI|MGI:90168 - symbol:Dcaf11 "DDB1 and CUL4 associated f... 772 1.1e-76 1
UNIPROTKB|Q5E9I8 - symbol:DCAF11 "DDB1- and CUL4-associat... 771 1.5e-76 1
UNIPROTKB|F1MVT2 - symbol:DCAF11 "DDB1- and CUL4-associat... 770 1.9e-76 1
RGD|1311288 - symbol:Dcaf11 "DDB1 and CUL4 associated fac... 765 6.3e-76 1
ASPGD|ASPL0000074293 - symbol:AN4800 species:162425 "Emer... 689 1.1e-72 2
WB|WBGene00008419 - symbol:wdr-23 species:6239 "Caenorhab... 613 8.1e-60 1
UNIPROTKB|P90794 - symbol:wdr-23 "DDB1- and CUL4-associat... 613 8.1e-60 1
UNIPROTKB|A8XEN7 - symbol:wdr-23 "DDB1- and CUL4-associat... 577 2.3e-58 2
FB|FBgn0034527 - symbol:CG9945 species:7227 "Drosophila m... 530 5.1e-51 1
DICTYBASE|DDB_G0291832 - symbol:wdr23 "WD40 repeat-contai... 487 1.8e-46 1
TAIR|locus:2043929 - symbol:AT2G43770 "AT2G43770" species... 230 4.1e-20 2
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 209 2.7e-18 2
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 210 2.1e-16 2
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 210 3.1e-15 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 210 6.7e-15 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 210 6.7e-15 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 210 6.7e-15 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 210 6.7e-15 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 210 6.7e-15 1
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 208 1.7e-14 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 205 1.9e-14 1
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 207 2.3e-14 1
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 206 2.9e-14 1
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 206 2.9e-14 1
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 206 2.9e-14 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 204 3.2e-14 1
UNIPROTKB|F1NUK8 - symbol:SNRNP40 "Uncharacterized protei... 206 3.9e-14 1
DICTYBASE|DDB_G0278353 - symbol:smu1 "suppressor of mec-8... 209 4.3e-14 1
WB|WBGene00015974 - symbol:C18E3.5 species:6239 "Caenorha... 202 6.0e-14 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 202 6.3e-14 1
ZFIN|ZDB-GENE-040426-978 - symbol:snrnp40 "small nuclear ... 199 1.7e-13 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 199 2.1e-13 1
FB|FBgn0031229 - symbol:CG3436 species:7227 "Drosophila m... 197 3.0e-13 1
DICTYBASE|DDB_G0282189 - symbol:tupA "transcriptional rep... 199 7.0e-13 1
ZFIN|ZDB-GENE-040426-1851 - symbol:wdr61 "WD repeat domai... 150 1.6e-12 2
UNIPROTKB|B4DQJ1 - symbol:SNRNP40 "U5 small nuclear ribon... 188 5.7e-12 1
TAIR|locus:2148965 - symbol:TOZ "AT5G16750" species:3702 ... 176 6.6e-12 2
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 169 8.3e-12 2
UNIPROTKB|E2RBV0 - symbol:WDR61 "Uncharacterized protein"... 147 8.5e-12 2
DICTYBASE|DDB_G0289711 - symbol:morg1 "mitogen-activated ... 116 1.6e-11 3
FB|FBgn0036354 - symbol:Poc1 "Proteome of centrioles 1" s... 183 1.9e-11 1
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 149 6.1e-11 3
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 148 6.2e-11 3
DICTYBASE|DDB_G0271788 - symbol:wdr57 "putative U5 small ... 176 9.0e-11 1
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 161 1.2e-10 2
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 150 1.4e-10 2
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 149 1.5e-10 2
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 173 1.6e-10 1
RGD|621047 - symbol:Plrg1 "pleiotropic regulator 1" speci... 113 1.8e-10 2
UNIPROTKB|G3V1X0 - symbol:POC1B "POC1 centriolar protein ... 150 2.0e-10 2
SGD|S000000680 - symbol:TUP1 "General repressor of transc... 166 2.1e-10 2
MGI|MGI:1858197 - symbol:Plrg1 "pleiotropic regulator 1, ... 111 3.8e-10 2
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 153 4.2e-10 2
UNIPROTKB|Q6GMD2 - symbol:wdr61 "WD repeat-containing pro... 168 4.5e-10 1
ASPGD|ASPL0000041012 - symbol:AN9085 species:162425 "Emer... 170 4.5e-10 1
ZFIN|ZDB-GENE-000616-4 - symbol:apaf1 "apoptotic protease... 177 6.2e-10 1
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 170 6.5e-10 1
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 169 6.6e-10 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 169 6.6e-10 1
ASPGD|ASPL0000002074 - symbol:rcoA species:162425 "Emeric... 172 7.2e-10 1
POMBASE|SPBC32H8.07 - symbol:git5 "heterotrimeric G prote... 166 7.6e-10 1
UNIPROTKB|Q2KID6 - symbol:PLRG1 "Pleiotropic regulator 1"... 111 7.8e-10 2
UNIPROTKB|O43660 - symbol:PLRG1 "Pleiotropic regulator 1"... 111 7.9e-10 2
UNIPROTKB|E2QYT6 - symbol:PLRG1 "Uncharacterized protein"... 111 7.9e-10 2
CGD|CAL0005013 - symbol:SWD3 species:5476 "Candida albica... 143 8.0e-10 2
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 177 9.8e-10 1
TAIR|locus:2176085 - symbol:AT5G64730 "AT5G64730" species... 153 1.1e-09 2
DICTYBASE|DDB_G0289115 - symbol:mhkB "myosin heavy chain ... 171 1.4e-09 1
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 165 1.6e-09 2
FB|FBgn0023423 - symbol:slmb "supernumerary limbs" specie... 168 1.6e-09 1
FB|FBgn0027524 - symbol:CG3909 species:7227 "Drosophila m... 164 1.7e-09 1
UNIPROTKB|F1S8U2 - symbol:BTRC "Uncharacterized protein" ... 167 2.1e-09 1
RGD|1359721 - symbol:Btrc "beta-transducin repeat contain... 167 2.1e-09 1
POMBASE|SPBC713.05 - symbol:SPBC713.05 "WD repeat protein... 159 2.1e-09 2
POMBASE|SPAC630.14c - symbol:tup12 "transcriptional corep... 168 2.2e-09 1
UNIPROTKB|Q229Z6 - symbol:TTHERM_01308010 "POC1 centriola... 168 2.4e-09 1
UNIPROTKB|Q68DS0 - symbol:DKFZp781N011 "Putative uncharac... 167 2.5e-09 1
UNIPROTKB|F1MVN1 - symbol:BTRC "Uncharacterized protein" ... 167 2.6e-09 1
UNIPROTKB|E1BVN5 - symbol:PLRG1 "Uncharacterized protein"... 110 2.6e-09 2
UNIPROTKB|F1NYG1 - symbol:BTRC "Uncharacterized protein" ... 167 2.8e-09 1
UNIPROTKB|E2RDC4 - symbol:BTRC "Uncharacterized protein" ... 167 2.8e-09 1
UNIPROTKB|Q9Y297 - symbol:BTRC "F-box/WD repeat-containin... 167 2.8e-09 1
MGI|MGI:1338871 - symbol:Btrc "beta-transducin repeat con... 167 2.8e-09 1
UNIPROTKB|F1LMH8 - symbol:Btrc "Protein Btrc" species:101... 167 2.8e-09 1
ZFIN|ZDB-GENE-051120-180 - symbol:taf5 "TAF5 RNA polymera... 168 3.1e-09 1
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 153 3.1e-09 2
GENEDB_PFALCIPARUM|PF08_0019 - symbol:PF08_0019 "receptor... 161 3.5e-09 1
UNIPROTKB|Q8IBA0 - symbol:PfRACK "Receptor for activated ... 161 3.5e-09 1
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 152 4.4e-09 2
FB|FBgn0030365 - symbol:Tango4 "Transport and Golgi organ... 108 4.6e-09 2
POMBASE|SPCC16A11.02 - symbol:utp13 "U3 snoRNP-associated... 144 5.5e-09 2
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 138 5.9e-09 3
DICTYBASE|DDB_G0277471 - symbol:DDB_G0277471 "putative pr... 152 6.2e-09 2
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 152 6.6e-09 2
FB|FBgn0034931 - symbol:CG2812 species:7227 "Drosophila m... 159 7.4e-09 1
WARNING: Descriptions of 572 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2139335 [details] [associations]
symbol:AT4G03020 "AT4G03020" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GO:GO:0080008 KO:K11801 InterPro:IPR017399 PIRSF:PIRSF038135
OMA:RMLHQRE EMBL:AY099735 EMBL:BT000357 IPI:IPI00532225
RefSeq:NP_001190666.1 RefSeq:NP_192211.2 UniGene:At.34236
ProteinModelPortal:Q8LPI5 SMR:Q8LPI5 IntAct:Q8LPI5 STRING:Q8LPI5
PaxDb:Q8LPI5 PRIDE:Q8LPI5 EnsemblPlants:AT4G03020.1
EnsemblPlants:AT4G03020.2 GeneID:828111 KEGG:ath:AT4G03020
TAIR:At4g03020 InParanoid:Q8LPI5 PhylomeDB:Q8LPI5
ProtClustDB:CLSN2690277 Genevestigator:Q8LPI5 Uniprot:Q8LPI5
Length = 493
Score = 1516 (538.7 bits), Expect = 1.7e-155, P = 1.7e-155
Identities = 284/394 (72%), Positives = 327/394 (82%)
Query: 1 MLVGREVNYSGRGRFSAADSCHVLSRYLPVNGPWKVDGMNSRVYTSQFSNDGSFFVAASQ 60
ML GRE N+SGRGRFSAAD CH+LSRYLP GPW VD M+SR Y SQFS DGS F+A Q
Sbjct: 87 MLAGRESNFSGRGRFSAADCCHMLSRYLPTKGPWLVDQMDSRAYVSQFSTDGSLFIAGFQ 146
Query: 61 ESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQRFLVYASICAIVNIVDVGSSARE 120
S I++YNV+K WK+QKDI K+LRWT+TDTSLSPDQR LVYAS+ IV+IVDVGS + E
Sbjct: 147 GSRIRIYNVEKGWKVQKDILAKSLRWTVTDTSLSPDQRNLVYASMSPIVHIVDVGSGSTE 206
Query: 121 SLANVT-IHKGLDFSADGDED-EFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLR 178
S ANVT IH GLDFS+D D FGIFSVKFSTDG+E+VA SD+ IYVYDL+AN+ SLR
Sbjct: 207 SHANVTEIHDGLDFSSDEDGGYSFGIFSVKFSTDGREVVAGSSDDSIYVYDLEANRVSLR 266
Query: 179 IPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDS 238
AH SDVNTVCFADE+G+LI SGSDD+LCKVWDRRCFI + + GVL+GHLEG+TFIDS
Sbjct: 267 TVAHTSDVNTVCFADESGNLILSGSDDNLCKVWDRRCFIGRDKPAGVLVGHLEGVTFIDS 326
Query: 239 RRDGRYFISNGKDQTTKLWDIRKMSSNTTDNSR-LRDYDWDYRWMEYPSYARRLKHPHDQ 297
R DGRYFISNGKDQT KLWDIRKMSS+ LR+Y+WDYRWM+YP+ AR LKHP DQ
Sbjct: 327 RGDGRYFISNGKDQTIKLWDIRKMSSSAPARHEVLRNYEWDYRWMDYPTEARDLKHPLDQ 386
Query: 298 SLATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPV 357
S++TYKGHSVLRTLIRCYFSP +ST QKYIYTGS+D+SVYIYDLVSG +VA L H++PV
Sbjct: 387 SVSTYKGHSVLRTLIRCYFSPAHSTGQKYIYTGSNDSSVYIYDLVSGDKVAVLKHHSSPV 446
Query: 358 RDCCWHPIYPMLISSSWDCNIVRWEIPGIGEAPL 391
RDC WHP YP LISSSWD ++V+WE PG GEAP+
Sbjct: 447 RDCNWHPYYPTLISSSWDGDLVKWEFPGSGEAPI 480
>ZFIN|ZDB-GENE-050809-116 [details] [associations]
symbol:dcaf11 "ddb1 and cul4 associated factor 11"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050809-116 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
CTD:80344 HOGENOM:HOG000241217 HOVERGEN:HBG055176 KO:K11801
OrthoDB:EOG44TP7K InterPro:IPR017399 PIRSF:PIRSF038135
GeneTree:ENSGT00700000104507 OMA:RMLHQRE EMBL:CR405710
EMBL:BC099999 IPI:IPI00491931 RefSeq:NP_001026845.1
UniGene:Dr.134153 STRING:Q499B0 Ensembl:ENSDART00000002992
GeneID:567578 KEGG:dre:567578 InParanoid:Q499B0 NextBio:20888741
Uniprot:Q499B0
Length = 541
Score = 787 (282.1 bits), Expect = 3.0e-78, P = 3.0e-78
Identities = 165/388 (42%), Positives = 234/388 (60%)
Query: 1 MLVGREVNYSGRGRFSAADSCHVLSRYLPVNGPWKVDGMNSRVYTSQFSNDGSFFVAASQ 60
ML RE FS + + S +LP + +K D +V+ +S++G+ F++A Q
Sbjct: 138 MLAEREQGRCRGSSFSHGECSRIRSHFLPNHVVYK-DTYQQKVFCGVYSDEGNMFLSACQ 196
Query: 61 ESNIKVYNVDKN-WKIQKDIETKALRWTITDTSLSPDQRFLVYASICAIVNIVDVGSSAR 119
+ NI++Y+ + + ++K ++ + + W+I D +PD R ++Y+S +++ V
Sbjct: 197 DQNIRLYDTSRGRFTLKKTVKARDVGWSILDVCFTPDARCVLYSSWSDYIHVCSVDGD-- 254
Query: 120 ESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRI 179
N T H LD + D E F +FS+ STDG+E++ +D +YV+D + NK +L+I
Sbjct: 255 ----NET-HTALDLNPD--ERRFCVFSLAASTDGKEILGGANDGCLYVFDREQNKRTLKI 307
Query: 180 PAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFIS-KGRANGVLMGHLEGITFIDS 238
AH+ DVN V FAD + L+FSGSDD+LCKVWDRR + + G L GH +GITFI S
Sbjct: 308 DAHEDDVNAVAFADSSSQLLFSGSDDALCKVWDRRTLREDRPQPVGHLAGHRDGITFIHS 367
Query: 239 RRDGRYFISNGKDQTTKLWDIRKMSSNT-TDNSRLR--DYDWDYRWMEYPSYA-RRLKHP 294
+ D RY ISN KDQT KLWD+RK S SRL +WDYRW + P A +R K
Sbjct: 368 KGDARYLISNSKDQTIKLWDVRKFSPKEGLAASRLAVTQQNWDYRWQQVPQRALKRHKLT 427
Query: 295 HDQSLATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHN 354
D S+ TY+GH VL TLIRC FSPE+ST QK+IYTG S + IYD+++G+ V KL H+
Sbjct: 428 GDTSVMTYRGHGVLHTLIRCRFSPEFSTGQKFIYTGCSTGKIVIYDVLTGSVVCKLSNHD 487
Query: 355 APVRDCCWHPIYPMLISSSWDCNIVRWE 382
A VRD WHP ++SSSWD I WE
Sbjct: 488 ACVRDVSWHPYNNNMVSSSWDGAIRLWE 515
>UNIPROTKB|F1SGL8 [details] [associations]
symbol:DCAF11 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0080008 KO:K11801 InterPro:IPR017399
PIRSF:PIRSF038135 GeneTree:ENSGT00700000104507 OMA:RMLHQRE
EMBL:CT961055 RefSeq:XP_001928394.1 UniGene:Ssc.26086
ProteinModelPortal:F1SGL8 Ensembl:ENSSSCT00000002247
GeneID:100157270 KEGG:ssc:100157270 Uniprot:F1SGL8
Length = 546
Score = 781 (280.0 bits), Expect = 1.3e-77, P = 1.3e-77
Identities = 162/388 (41%), Positives = 227/388 (58%)
Query: 1 MLVGREVNYSGRGRFSAADSCHVLSRYLPVNGPWKVDGMNSRVYTSQFSNDGSFFVAASQ 60
ML+ RE RG FS + V+S +LP N +D + + + +S DG F++A Q
Sbjct: 134 MLLQRERGLCHRGSFSLGEQSRVMSHFLP-NDLGFIDTYSQKAFCGIYSKDGQIFMSACQ 192
Query: 61 ESNIKVYNVDKN-WKIQKDIETKALRWTITDTSLSPDQRFLVYASICAIVNIVDVGSSAR 119
+ I++Y+ + K I+ + + W++ D + +PD +Y+S ++I ++
Sbjct: 193 DQVIRMYDCRYGRFHKFKSIKARDVGWSVLDVAFTPDGNHFLYSSWSDYIHICNIYGEG- 251
Query: 120 ESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRI 179
H LD E F +FS+ S+DG+E++ +D +YV+D + N+ +L+I
Sbjct: 252 ------DTHTALDLRPV--ERRFAVFSIAVSSDGREVLGGANDGCLYVFDREQNRRTLQI 303
Query: 180 PAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKG-RANGVLMGHLEGITFIDS 238
+H+ DVN V FAD + ++FSG DD++CKVWDRR + G L GH +GITFIDS
Sbjct: 304 ESHEDDVNAVAFADMSSQILFSGGDDAICKVWDRRTMREDDPKPVGALAGHQDGITFIDS 363
Query: 239 RRDGRYFISNGKDQTTKLWDIRKMSSNT-TDNSR--LRDYDWDYRWMEYPSYA-RRLKHP 294
+ D RY ISN KDQT KLWDIR+ SS + SR DWDYRW + P A R+LK P
Sbjct: 364 KGDARYLISNSKDQTIKLWDIRRFSSREGMEASRQAATQQDWDYRWQQVPKKAWRKLKLP 423
Query: 295 HDQSLATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHN 354
D SL TY+GH VL TLIRC FSP YST Q+YIY+G S V +YDL+SG V KL H
Sbjct: 424 GDSSLMTYRGHGVLHTLIRCRFSPTYSTGQQYIYSGCSTGKVVVYDLLSGHIVKKLTSHK 483
Query: 355 APVRDCCWHPIYPMLISSSWDCNIVRWE 382
A VRD WHP ++SSSWD N+ W+
Sbjct: 484 ACVRDVSWHPFEEKIVSSSWDGNLRLWQ 511
>UNIPROTKB|Q8TEB1 [details] [associations]
symbol:DCAF11 "DDB1- and CUL4-associated factor 11"
species:9606 "Homo sapiens" [GO:0016567 "protein ubiquitination"
evidence=IEA;IC] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016567 EMBL:CH471078 EMBL:AL136295 GO:GO:0080008 CTD:80344
HOVERGEN:HBG055176 KO:K11801 OrthoDB:EOG44TP7K InterPro:IPR017399
PIRSF:PIRSF038135 EMBL:AF267858 EMBL:AK027223 EMBL:AK057636
EMBL:AK074296 EMBL:BX161405 EMBL:BX247970 EMBL:BC008858
EMBL:BC067132 EMBL:AF130070 EMBL:AL833831 IPI:IPI00178972
IPI:IPI00328589 IPI:IPI00328631 RefSeq:NP_001156956.1
RefSeq:NP_079506.3 RefSeq:NP_852002.1 UniGene:Hs.525251
ProteinModelPortal:Q8TEB1 SMR:Q8TEB1 IntAct:Q8TEB1 STRING:Q8TEB1
PhosphoSite:Q8TEB1 DMDM:37538034 PaxDb:Q8TEB1 PRIDE:Q8TEB1
Ensembl:ENST00000396936 Ensembl:ENST00000396941
Ensembl:ENST00000446197 Ensembl:ENST00000559115 GeneID:80344
KEGG:hsa:80344 UCSC:uc001wlv.3 UCSC:uc001wlz.3 UCSC:uc001wmb.4
GeneCards:GC14P024583 HGNC:HGNC:20258 HPA:HPA031157 MIM:613317
neXtProt:NX_Q8TEB1 PharmGKB:PA165478701 InParanoid:Q8TEB1
OMA:RMLHQRE PhylomeDB:Q8TEB1 GenomeRNAi:80344 NextBio:70930
Bgee:Q8TEB1 CleanEx:HS_WDR23 Genevestigator:Q8TEB1
GermOnline:ENSG00000100897 Uniprot:Q8TEB1
Length = 546
Score = 773 (277.2 bits), Expect = 9.0e-77, P = 9.0e-77
Identities = 160/388 (41%), Positives = 227/388 (58%)
Query: 1 MLVGREVNYSGRGRFSAADSCHVLSRYLPVNGPWKVDGMNSRVYTSQFSNDGSFFVAASQ 60
ML RE RG FS + V+S +LP N D + + + +S DG F++A Q
Sbjct: 134 MLHQRERGLCHRGSFSLGEQSRVISHFLP-NDLGFTDSYSQKAFCGIYSKDGQIFMSACQ 192
Query: 61 ESNIKVYNVDKN-WKIQKDIETKALRWTITDTSLSPDQRFLVYASICAIVNIVDVGSSAR 119
+ I++Y+ ++ K I+ + + W++ D + +PD +Y+S ++I ++
Sbjct: 193 DQTIRLYDCRYGRFRKFKSIKARDVGWSVLDVAFTPDGNHFLYSSWSDYIHICNIYGEG- 251
Query: 120 ESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRI 179
H LD D E F +FS+ S+DG+E++ +D +YV+D + N+ +L+I
Sbjct: 252 ------DTHTALDLRPD--ERRFAVFSIAVSSDGREVLGGANDGCLYVFDREQNRRTLQI 303
Query: 180 PAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKG-RANGVLMGHLEGITFIDS 238
+H+ DVN V FAD + ++FSG DD++CKVWDRR + G L GH +GITFIDS
Sbjct: 304 ESHEDDVNAVAFADISSQILFSGGDDAICKVWDRRTMREDDPKPVGALAGHQDGITFIDS 363
Query: 239 RRDGRYFISNGKDQTTKLWDIRKMSSNT-TDNSR--LRDYDWDYRWMEYPSYA-RRLKHP 294
+ D RY ISN KDQT KLWDIR+ SS + SR +WDYRW + P A R+LK P
Sbjct: 364 KGDARYLISNSKDQTIKLWDIRRFSSREGMEASRQAATQQNWDYRWQQVPKKAWRKLKLP 423
Query: 295 HDQSLATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHN 354
D SL TY+GH VL TLIRC FSP +ST Q++IY+G S V +YDL+SG V KL H
Sbjct: 424 GDSSLMTYRGHGVLHTLIRCRFSPIHSTGQQFIYSGCSTGKVVVYDLLSGHIVKKLTNHK 483
Query: 355 APVRDCCWHPIYPMLISSSWDCNIVRWE 382
A VRD WHP ++SSSWD N+ W+
Sbjct: 484 ACVRDVSWHPFEEKIVSSSWDGNLRLWQ 511
>UNIPROTKB|Q5R7H5 [details] [associations]
symbol:DCAF11 "DDB1- and CUL4-associated factor 11"
species:9601 "Pongo abelii" [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016567 GO:GO:0080008 CTD:80344 HOGENOM:HOG000241217
KO:K11801 InterPro:IPR017399 PIRSF:PIRSF038135 EMBL:CR857585
EMBL:CR860141 RefSeq:NP_001126335.1 RefSeq:NP_001128756.1
UniGene:Pab.18820 UniGene:Pab.19847 ProteinModelPortal:Q5R7H5
GeneID:100173316 GeneID:100189652 KEGG:pon:100173316
KEGG:pon:100189652 InParanoid:Q5R7H5 Uniprot:Q5R7H5
Length = 546
Score = 772 (276.8 bits), Expect = 1.1e-76, P = 1.1e-76
Identities = 160/388 (41%), Positives = 227/388 (58%)
Query: 1 MLVGREVNYSGRGRFSAADSCHVLSRYLPVNGPWKVDGMNSRVYTSQFSNDGSFFVAASQ 60
ML RE RG FS + V+S +LP N D + + + +S DG F++A Q
Sbjct: 134 MLHQRERGLCHRGSFSLGEQSRVISHFLP-NDLGFTDSYSQKAFCGIYSKDGQIFMSACQ 192
Query: 61 ESNIKVYNVDKN-WKIQKDIETKALRWTITDTSLSPDQRFLVYASICAIVNIVDVGSSAR 119
+ I++Y+ ++ K I+ + + W++ D + +PD +Y+S ++I ++
Sbjct: 193 DQTIRLYDCRYGRFRKFKSIKARDVGWSVLDVAFTPDGSHFLYSSWSDYIHICNIYGEG- 251
Query: 120 ESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRI 179
H LD D E F +FS+ S+DG+E++ +D +YV+D + N+ +L+I
Sbjct: 252 ------DTHTALDLRPD--ERRFAVFSIAVSSDGREVLGGANDGCLYVFDREQNRRTLQI 303
Query: 180 PAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKG-RANGVLMGHLEGITFIDS 238
+H+ DVN V FAD + ++FSG DD++CKVWDRR + G L GH +GITFIDS
Sbjct: 304 ESHEDDVNAVAFADISSQILFSGGDDAICKVWDRRTMREDDPKPVGALAGHQDGITFIDS 363
Query: 239 RRDGRYFISNGKDQTTKLWDIRKMSSNT-TDNSR--LRDYDWDYRWMEYPSYA-RRLKHP 294
+ D RY ISN KDQT KLWDIR+ SS + SR +WDYRW + P A R+LK P
Sbjct: 364 KGDARYLISNSKDQTIKLWDIRRFSSREGMEASRQAATQQNWDYRWQQVPKKAWRKLKLP 423
Query: 295 HDQSLATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHN 354
D SL TY+GH VL TLIRC FSP +ST Q++IY+G S V +YDL+SG V KL H
Sbjct: 424 GDSSLMTYRGHGVLHTLIRCRFSPIHSTGQQFIYSGCSTGKVVVYDLLSGHIVKKLTNHK 483
Query: 355 APVRDCCWHPIYPMLISSSWDCNIVRWE 382
A VRD WHP ++SSSWD N+ W+
Sbjct: 484 ACVRDVSWHPFEEKIVSSSWDGNLRLWQ 511
>MGI|MGI:90168 [details] [associations]
symbol:Dcaf11 "DDB1 and CUL4 associated factor 11"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 MGI:MGI:90168 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0080008 CTD:80344
HOGENOM:HOG000241217 HOVERGEN:HBG055176 KO:K11801 OrthoDB:EOG44TP7K
InterPro:IPR017399 PIRSF:PIRSF038135 GeneTree:ENSGT00700000104507
OMA:RMLHQRE EMBL:AK033540 EMBL:AK152395 EMBL:BC008545 EMBL:BC037001
IPI:IPI00127271 IPI:IPI00378419 RefSeq:NP_001185938.1
RefSeq:NP_598495.1 UniGene:Mm.11535 UniGene:Mm.488383
ProteinModelPortal:Q91VU6 SMR:Q91VU6 STRING:Q91VU6
PhosphoSite:Q91VU6 PaxDb:Q91VU6 PRIDE:Q91VU6 DNASU:28199
Ensembl:ENSMUST00000072530 Ensembl:ENSMUST00000117236
Ensembl:ENSMUST00000121622 GeneID:28199 KEGG:mmu:28199
UCSC:uc007tyz.2 InParanoid:Q91VU6 ChiTaRS:DCAF11 NextBio:306796
Bgee:Q91VU6 CleanEx:MM_WDR23 Genevestigator:Q91VU6
GermOnline:ENSMUSG00000022214 Uniprot:Q91VU6
Length = 549
Score = 772 (276.8 bits), Expect = 1.1e-76, P = 1.1e-76
Identities = 160/388 (41%), Positives = 227/388 (58%)
Query: 1 MLVGREVNYSGRGRFSAADSCHVLSRYLPVNGPWKVDGMNSRVYTSQFSNDGSFFVAASQ 60
ML RE RG FS + V+S +LP N D + + + +S DG F++A Q
Sbjct: 134 MLHQRERGLCHRGSFSLGEQSRVMSHFLP-NDLSFTDTYSQKAFCGIYSKDGQIFMSACQ 192
Query: 61 ESNIKVYNVDKN-WKIQKDIETKALRWTITDTSLSPDQRFLVYASICAIVNIVDVGSSAR 119
+ I++Y+ + K I+ + + W++ D + +PD +Y+S ++I ++
Sbjct: 193 DQTIRLYDCRYGRFHKFKSIKARDVGWSVLDVAFTPDGNHFLYSSWSDYIHICNIYGEG- 251
Query: 120 ESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRI 179
H LD D E F +FS+ S+DG+E++ +D +YV+D + N+ +L+I
Sbjct: 252 ------DTHTALDLRPD--ERRFAVFSIAVSSDGREVLGGANDGCLYVFDREQNRRTLQI 303
Query: 180 PAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKG-RANGVLMGHLEGITFIDS 238
+H+ DVN V FAD + ++FSG DD++CKVWDRR + G L GH +GITFIDS
Sbjct: 304 ESHEDDVNAVAFADISSQILFSGGDDAICKVWDRRTMREDDPKPVGALAGHQDGITFIDS 363
Query: 239 RRDGRYFISNGKDQTTKLWDIRKMSSNT-TDNSRLR--DYDWDYRWMEYPSYA-RRLKHP 294
+ D RY ISN KDQT KLWDIR+ SS + SRL +WDYRW + P A ++LK P
Sbjct: 364 KGDARYLISNSKDQTIKLWDIRRFSSREGMEASRLAATQQNWDYRWQQVPKIAWKKLKLP 423
Query: 295 HDQSLATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHN 354
D SL TY+GH VL TLIRC FSP +ST Q++IY+G S V +YDL+SG V KL H
Sbjct: 424 GDSSLMTYRGHGVLHTLIRCRFSPAHSTGQQFIYSGCSTGKVVVYDLLSGHIVKKLTNHK 483
Query: 355 APVRDCCWHPIYPMLISSSWDCNIVRWE 382
A VRD WHP ++SSSWD N+ W+
Sbjct: 484 ACVRDVSWHPFEEKIVSSSWDGNLRLWQ 511
>UNIPROTKB|Q5E9I8 [details] [associations]
symbol:DCAF11 "DDB1- and CUL4-associated factor 11"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 EMBL:BT020932 IPI:IPI00710208
RefSeq:NP_001014954.1 UniGene:Bt.20137 ProteinModelPortal:Q5E9I8
STRING:Q5E9I8 GeneID:539433 KEGG:bta:539433 CTD:80344
HOGENOM:HOG000241217 HOVERGEN:HBG055176 InParanoid:Q5E9I8 KO:K11801
OrthoDB:EOG44TP7K NextBio:20877986 InterPro:IPR017399
PIRSF:PIRSF038135 Uniprot:Q5E9I8
Length = 546
Score = 771 (276.5 bits), Expect = 1.5e-76, P = 1.5e-76
Identities = 159/388 (40%), Positives = 227/388 (58%)
Query: 1 MLVGREVNYSGRGRFSAADSCHVLSRYLPVNGPWKVDGMNSRVYTSQFSNDGSFFVAASQ 60
ML RE +G FS + V+S +LP N D + + + +S DG F++A Q
Sbjct: 134 MLHQRERGLCHQGSFSLGERSRVMSHFLP-NDLGFTDTYSQKAFCGIYSKDGQIFMSACQ 192
Query: 61 ESNIKVYNVDKN-WKIQKDIETKALRWTITDTSLSPDQRFLVYASICAIVNIVDVGSSAR 119
+ I++Y+ ++ K I+ + + W++ D + +PD +Y+S ++I ++
Sbjct: 193 DQTIRLYDCRYGRFRKFKSIKARDVGWSVLDVAFTPDGNHFLYSSWSDYIHICNIYGEG- 251
Query: 120 ESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRI 179
H LD D E F +FS+ S+DG+E++ +D +YV+D + N+ +L+I
Sbjct: 252 ------DTHTALDLRPD--ERRFAVFSIAVSSDGREVLGGANDGCLYVFDREQNRRTLQI 303
Query: 180 PAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKG-RANGVLMGHLEGITFIDS 238
+H+ DVN V FAD + ++FSG DD++CKVWDRR + G L GH +GITFIDS
Sbjct: 304 ESHEDDVNAVAFADVSSQILFSGGDDAICKVWDRRTMREDDPKPVGALAGHQDGITFIDS 363
Query: 239 RRDGRYFISNGKDQTTKLWDIRKMSSNT-TDNSR--LRDYDWDYRWMEYPSYA-RRLKHP 294
+ D RY ISN KDQT KLWDIR+ SS + SR +WDYRW + P A R+LK P
Sbjct: 364 KGDARYLISNSKDQTIKLWDIRRFSSREGMEASRQAATQQNWDYRWQQVPKKAWRKLKLP 423
Query: 295 HDQSLATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHN 354
D SL TY+GH VL TLIRC FSP +ST Q++IY+G S V +YDL+SG V KL H
Sbjct: 424 GDSSLMTYRGHGVLHTLIRCRFSPTHSTGQQFIYSGCSTGKVVVYDLLSGHVVKKLTTHK 483
Query: 355 APVRDCCWHPIYPMLISSSWDCNIVRWE 382
A VRD WHP ++SSSWD N+ W+
Sbjct: 484 ACVRDVSWHPFEEKIVSSSWDGNLRLWQ 511
>UNIPROTKB|F1MVT2 [details] [associations]
symbol:DCAF11 "DDB1- and CUL4-associated factor 11"
species:9913 "Bos taurus" [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0080008 IPI:IPI00710208 UniGene:Bt.20137
InterPro:IPR017399 PIRSF:PIRSF038135 GeneTree:ENSGT00700000104507
OMA:RMLHQRE EMBL:DAAA02028032 ProteinModelPortal:F1MVT2
Ensembl:ENSBTAT00000028515 ArrayExpress:F1MVT2 Uniprot:F1MVT2
Length = 546
Score = 770 (276.1 bits), Expect = 1.9e-76, P = 1.9e-76
Identities = 159/388 (40%), Positives = 227/388 (58%)
Query: 1 MLVGREVNYSGRGRFSAADSCHVLSRYLPVNGPWKVDGMNSRVYTSQFSNDGSFFVAASQ 60
ML RE +G FS + V+S +LP N D + + + +S DG F++A Q
Sbjct: 134 MLHQRERGLCHQGSFSLGERSRVMSHFLP-NDLGFTDTYSQKAFCGIYSKDGQIFMSACQ 192
Query: 61 ESNIKVYNVDKN-WKIQKDIETKALRWTITDTSLSPDQRFLVYASICAIVNIVDVGSSAR 119
+ I++Y+ ++ K I+ + + W++ D + +PD +Y+S ++I ++
Sbjct: 193 DQTIRLYDCRYGRFRKFKSIKARDVGWSVLDVAFTPDGNHFLYSSWSDYIHICNIYGEG- 251
Query: 120 ESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRI 179
H LD D E F +FS+ S+DG+E++ +D +YV+D + N+ +L+I
Sbjct: 252 ------DTHTALDLRPD--ERRFAVFSIAVSSDGREVLGGANDGCLYVFDREQNRRTLQI 303
Query: 180 PAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKG-RANGVLMGHLEGITFIDS 238
+H+ DVN V FAD + ++FSG DD++CKVWDRR + G L GH +GITFIDS
Sbjct: 304 ESHEDDVNAVAFADVSSQILFSGGDDAICKVWDRRTMREDDPKPVGALAGHQDGITFIDS 363
Query: 239 RRDGRYFISNGKDQTTKLWDIRKMSSNT-TDNSR--LRDYDWDYRWMEYPSYA-RRLKHP 294
+ D RY ISN KDQT KLWDIR+ SS + SR +WDYRW + P A R+LK P
Sbjct: 364 KGDARYLISNSKDQTIKLWDIRRFSSREGMEASRQAATQQNWDYRWQQVPKKAWRKLKLP 423
Query: 295 HDQSLATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHN 354
D SL TY+GH VL TLIRC FSP +ST Q++IY+G S V +YDL+SG V KL H
Sbjct: 424 GDSSLMTYRGHGVLHTLIRCRFSPTHSTGQQFIYSGCSTGKVVVYDLLSGHIVKKLTTHK 483
Query: 355 APVRDCCWHPIYPMLISSSWDCNIVRWE 382
A VRD WHP ++SSSWD N+ W+
Sbjct: 484 ACVRDVSWHPFEEKIVSSSWDGNLRLWQ 511
>RGD|1311288 [details] [associations]
symbol:Dcaf11 "DDB1 and CUL4 associated factor 11" species:10116
"Rattus norvegicus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISO;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 RGD:1311288 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0080008 CTD:80344
HOGENOM:HOG000241217 KO:K11801 OrthoDB:EOG44TP7K InterPro:IPR017399
PIRSF:PIRSF038135 GeneTree:ENSGT00700000104507 OMA:RMLHQRE
EMBL:BC087110 EMBL:BC091364 IPI:IPI00196528 RefSeq:NP_001009686.1
UniGene:Rn.16542 ProteinModelPortal:Q5M9G8 STRING:Q5M9G8
Ensembl:ENSRNOT00000059987 GeneID:305895 KEGG:rno:305895
UCSC:RGD:1311288 InParanoid:Q5M9G8 NextBio:655204
Genevestigator:Q5M9G8 Uniprot:Q5M9G8
Length = 549
Score = 765 (274.4 bits), Expect = 6.3e-76, P = 6.3e-76
Identities = 159/388 (40%), Positives = 226/388 (58%)
Query: 1 MLVGREVNYSGRGRFSAADSCHVLSRYLPVNGPWKVDGMNSRVYTSQFSNDGSFFVAASQ 60
ML RE RG FS + V+S +LP N D + + + +S DG F++A Q
Sbjct: 134 MLHQRERGLCHRGSFSLGEQSRVMSHFLP-NDLSFTDTYSQKAFCGIYSKDGQIFMSACQ 192
Query: 61 ESNIKVYNVDKN-WKIQKDIETKALRWTITDTSLSPDQRFLVYASICAIVNIVDVGSSAR 119
+ I++Y+ + K I+ + + W++ D + +PD +Y+S ++I +
Sbjct: 193 DQTIRLYDCRYGRFHKFKSIKARDVGWSVLDVAFTPDGNHFLYSSWSDYIHICSIYGEG- 251
Query: 120 ESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRI 179
H LD D E F +FS+ S+DG+E++ +D +YV+D + N+ +L+I
Sbjct: 252 ------DTHTALDLRPD--ERRFAVFSIAVSSDGREVLGGANDGCLYVFDREQNRRTLQI 303
Query: 180 PAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKG-RANGVLMGHLEGITFIDS 238
+H+ DVN V FAD + ++FSG DD++CKVWDRR + G L GH +GITFIDS
Sbjct: 304 ESHEDDVNAVAFADISSQILFSGGDDAICKVWDRRTMREDDPKPVGALAGHQDGITFIDS 363
Query: 239 RRDGRYFISNGKDQTTKLWDIRKMSSNT-TDNSRLR--DYDWDYRWMEYPSYA-RRLKHP 294
+ D RY ISN KDQT KLWDIR+ SS + SRL +WDYRW + P A ++LK P
Sbjct: 364 KGDARYLISNSKDQTIKLWDIRRFSSREGMEASRLAATQQNWDYRWQQVPKKAWKKLKLP 423
Query: 295 HDQSLATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHN 354
D SL TY+GH VL TLIRC FSP +ST Q++IY+G S V +YDL+SG V KL H
Sbjct: 424 GDSSLMTYRGHGVLHTLIRCRFSPAHSTGQQFIYSGCSTGKVVVYDLLSGHIVKKLTNHK 483
Query: 355 APVRDCCWHPIYPMLISSSWDCNIVRWE 382
A VRD WHP ++SSSWD ++ W+
Sbjct: 484 ACVRDVSWHPFEEKIVSSSWDGSLRLWQ 511
>ASPGD|ASPL0000074293 [details] [associations]
symbol:AN4800 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001303 EMBL:AACD01000081 KO:K11801 RefSeq:XP_662404.1
ProteinModelPortal:Q5B3T0 EnsemblFungi:CADANIAT00005621
GeneID:2872599 KEGG:ani:AN4800.2 HOGENOM:HOG000194480 OMA:KSSPHIL
OrthoDB:EOG4NCQND Uniprot:Q5B3T0
Length = 660
Score = 689 (247.6 bits), Expect = 1.1e-72, Sum P(2) = 1.1e-72
Identities = 142/346 (41%), Positives = 211/346 (60%)
Query: 5 REVNYSGRGRFSAADSCHVLSRYLPVNGPWKVDGMNSRVYTSQFSNDGSFFVAASQESNI 64
RE+ G+G S + +P K+ +++ Y+ QFS+DG+FF + +Q+ +
Sbjct: 195 RELGVDGQGLQRTRVSS-IAQGLIPGTTADKIIHYDAKCYSGQFSDDGNFFFSCAQDFKV 253
Query: 65 KVYNVDK--NWKIQKDIETKALRWTITDTSLSPDQRFLVYASICAIVNIV--DVGSSARE 120
++Y+ WK K ++ WTITD +LSPD RFL Y+S+ +V + D S+
Sbjct: 254 RMYDTSNPYEWKYYKTVDYPLASWTITDATLSPDNRFLAYSSLRQLVCLAPTDPADSSDP 313
Query: 121 SLANVTIHKGLDFSAD-GDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRI 179
+ ++ + D D F ++SV+FS DG+E+VA D+ + VYDL+ + LRI
Sbjct: 314 IILDLASSAQRRVARDIFGRDGFAVWSVRFSGDGREIVAGTGDHSVIVYDLETRQSVLRI 373
Query: 180 PAHKSDVNTVCFADETG-HLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDS 238
H+ DVN VCF D++ H+++SGSDDS +VWDRR ++ GR GV +GH EG+T++DS
Sbjct: 374 RNHEDDVNAVCFGDKSSPHILYSGSDDSTVRVWDRRS-MADGREAGVFVGHTEGLTYVDS 432
Query: 239 RRDGRYFISNGKDQTTKLWDIRKMSSNTT-DNSRLRDYD--WDYRWMEYPSYARRLKHPH 295
+ DGRY +SN KDQT KLWD+RKM S D Y +DYR+ +PS HPH
Sbjct: 433 KGDGRYVLSNSKDQTMKLWDLRKMMSTAKFDTLEPTSYGTGFDYRFDPFPSDFY-YPHPH 491
Query: 296 DQSLATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDL 341
D S+ T++GHSVLRTLIRC+FSP S+ +Y+Y+GS D VY+++L
Sbjct: 492 DCSVVTFRGHSVLRTLIRCHFSPPGSSDSRYVYSGSEDGKVYVWNL 537
Score = 64 (27.6 bits), Expect = 1.1e-72, Sum P(2) = 1.1e-72
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 357 VRDCCWHPIYPMLISSSWD 375
VRD WHP P+L ++SW+
Sbjct: 579 VRDASWHPNAPVLAATSWN 597
>WB|WBGene00008419 [details] [associations]
symbol:wdr-23 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0080135 "regulation of
cellular response to stress" evidence=IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0008340 GO:GO:0018991 GO:GO:0040010
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 GO:GO:0040018 GO:GO:0000122 KO:K11801
InterPro:IPR017399 PIRSF:PIRSF038135 EMBL:Z73906 PIR:T20359
PIR:T20360 RefSeq:NP_492124.1 RefSeq:NP_492125.1
ProteinModelPortal:P90794 SMR:P90794 DIP:DIP-26027N
MINT:MINT-1089361 STRING:P90794 EnsemblMetazoa:D2030.9a.1
EnsemblMetazoa:D2030.9a.2 EnsemblMetazoa:D2030.9a.3 GeneID:172518
KEGG:cel:CELE_D2030.9 CTD:172518 WormBase:D2030.9a
WormBase:D2030.9b GeneTree:ENSGT00700000104507 InParanoid:P90794
OMA:FADETGH NextBio:875863 ArrayExpress:P90794 GO:GO:0080135
Uniprot:P90794
Length = 571
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 143/395 (36%), Positives = 221/395 (55%)
Query: 2 LVGREVNYSGRGRFSAADSCHVLSRYLPVNGPWKVDGMNSRVYTSQFSNDGSFFVAASQE 61
++ R++ G + VL+ +LP N +VD + ++ + +Q+ +G+ V ASQ+
Sbjct: 127 ILNRDLQKRGTSISNPRTVARVLNSHLP-NQKRRVDRVATKSFCTQYIQNGTKIVVASQD 185
Query: 62 SNIKVY--NVDKNWKIQKDIETKALR-----WTITDTSLSPDQRFLVYASICAIVNIVDV 114
I+ Y N DK+ K +++ LR W+I DT++S + + Y + V + +
Sbjct: 186 EKIRFYQRNPDKSKYRSKYMKSDELRVDQCGWSILDTAISLNGDLIAYGTWKDAVFVGKL 245
Query: 115 GSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDL-QAN 173
+ R+ N+T +D + + D +F VKFS +++V S I+V+D+ Q
Sbjct: 246 DFTERQ---NITWFP-IDLNGEPGRDHCAVFCVKFSDSSEQIVCGTSQYSIHVFDVEQRR 301
Query: 174 KCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRAN--GVLMGHLE 231
+ + AH+ DVN+VCFAD +LI+S DD L KVWD+R + S G GV GH +
Sbjct: 302 RIRTIVNAHEDDVNSVCFADLGSNLIYSAGDDGLVKVWDKRAW-SDGDVEPVGVFAGHRD 360
Query: 232 GITFIDSRRDGRYFISNGKDQTTKLWDIRKMSSNT-TDNSR--LRDYDWDYRWMEYPSYA 288
G+T +DSR+D RY +SN KDQT K+WD+RK S+ + + +R ++ WDYRW P
Sbjct: 361 GVTHVDSRQDERYLLSNSKDQTIKVWDLRKFSNMSGVEATRACVQSQHWDYRWQPAPP-- 418
Query: 289 RRLKHP--HDQSLATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQ 346
L P D S+ T +GHSVL TL+R FSPE ST ++YIYTG + V +YD++SG
Sbjct: 419 -GLCQPVAGDTSVMTLRGHSVLHTLVRANFSPE-STGRRYIYTGCARGEVVVYDIMSGTV 476
Query: 347 VAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRW 381
+L H A VR+C WHP ++SS+WD W
Sbjct: 477 SRRLKGHTAVVRECDWHPTENEIVSSAWDGVTTVW 511
>UNIPROTKB|P90794 [details] [associations]
symbol:wdr-23 "DDB1- and CUL4-associated factor 11 homolog"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0018991
GO:GO:0040010 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0040018 GO:GO:0000122
KO:K11801 InterPro:IPR017399 PIRSF:PIRSF038135 EMBL:Z73906
PIR:T20359 PIR:T20360 RefSeq:NP_492124.1 RefSeq:NP_492125.1
ProteinModelPortal:P90794 SMR:P90794 DIP:DIP-26027N
MINT:MINT-1089361 STRING:P90794 EnsemblMetazoa:D2030.9a.1
EnsemblMetazoa:D2030.9a.2 EnsemblMetazoa:D2030.9a.3 GeneID:172518
KEGG:cel:CELE_D2030.9 CTD:172518 WormBase:D2030.9a
WormBase:D2030.9b GeneTree:ENSGT00700000104507 InParanoid:P90794
OMA:FADETGH NextBio:875863 ArrayExpress:P90794 GO:GO:0080135
Uniprot:P90794
Length = 571
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 143/395 (36%), Positives = 221/395 (55%)
Query: 2 LVGREVNYSGRGRFSAADSCHVLSRYLPVNGPWKVDGMNSRVYTSQFSNDGSFFVAASQE 61
++ R++ G + VL+ +LP N +VD + ++ + +Q+ +G+ V ASQ+
Sbjct: 127 ILNRDLQKRGTSISNPRTVARVLNSHLP-NQKRRVDRVATKSFCTQYIQNGTKIVVASQD 185
Query: 62 SNIKVY--NVDKNWKIQKDIETKALR-----WTITDTSLSPDQRFLVYASICAIVNIVDV 114
I+ Y N DK+ K +++ LR W+I DT++S + + Y + V + +
Sbjct: 186 EKIRFYQRNPDKSKYRSKYMKSDELRVDQCGWSILDTAISLNGDLIAYGTWKDAVFVGKL 245
Query: 115 GSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDL-QAN 173
+ R+ N+T +D + + D +F VKFS +++V S I+V+D+ Q
Sbjct: 246 DFTERQ---NITWFP-IDLNGEPGRDHCAVFCVKFSDSSEQIVCGTSQYSIHVFDVEQRR 301
Query: 174 KCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRAN--GVLMGHLE 231
+ + AH+ DVN+VCFAD +LI+S DD L KVWD+R + S G GV GH +
Sbjct: 302 RIRTIVNAHEDDVNSVCFADLGSNLIYSAGDDGLVKVWDKRAW-SDGDVEPVGVFAGHRD 360
Query: 232 GITFIDSRRDGRYFISNGKDQTTKLWDIRKMSSNT-TDNSR--LRDYDWDYRWMEYPSYA 288
G+T +DSR+D RY +SN KDQT K+WD+RK S+ + + +R ++ WDYRW P
Sbjct: 361 GVTHVDSRQDERYLLSNSKDQTIKVWDLRKFSNMSGVEATRACVQSQHWDYRWQPAPP-- 418
Query: 289 RRLKHP--HDQSLATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQ 346
L P D S+ T +GHSVL TL+R FSPE ST ++YIYTG + V +YD++SG
Sbjct: 419 -GLCQPVAGDTSVMTLRGHSVLHTLVRANFSPE-STGRRYIYTGCARGEVVVYDIMSGTV 476
Query: 347 VAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRW 381
+L H A VR+C WHP ++SS+WD W
Sbjct: 477 SRRLKGHTAVVRECDWHPTENEIVSSAWDGVTTVW 511
>UNIPROTKB|A8XEN7 [details] [associations]
symbol:wdr-23 "DDB1- and CUL4-associated factor 11 homolog"
species:6238 "Caenorhabditis briggsae" [GO:0008340 "determination
of adult lifespan" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008340 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR017399
PIRSF:PIRSF038135 EMBL:HE601540 ProteinModelPortal:A8XEN7
STRING:A8XEN7 EnsemblMetazoa:CBG11954 WormBase:CBG11954
Uniprot:A8XEN7
Length = 554
Score = 577 (208.2 bits), Expect = 2.3e-58, Sum P(2) = 2.3e-58
Identities = 134/395 (33%), Positives = 219/395 (55%)
Query: 2 LVGREVNYSGRGRFSAADSCHVLSRYLPVNGPWKVDGMNSRVYTSQFSNDGSFFVAASQE 61
++ R+V ++A H+L+ +LP N +VD + ++ + +Q+ +G V +SQ
Sbjct: 104 ILNRDVQRRNGPVMTSASRAHLLNTHLP-NKKRRVDQLRTKNFCAQYIQNGRKMVVSSQG 162
Query: 62 SNIKVYNVDKNWKIQKDIETKALRWT------ITDTSLSPDQRFLVYASICAIVNIVDVG 115
+ K+ KI+ + +++ T + D + +Q+ + S C + V +G
Sbjct: 163 ERENSFLSTKSGKIEISLPILSMQRTPCGPLQLVDLDTAVNQQGDLI-SYCTWKDAVYIG 221
Query: 116 SSARESLANVTIHKGLDFSAD-GDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDL-QAN 173
+E N+T +D+ + +++ +F V+FS D +++V S+ I+V+D+ Q
Sbjct: 222 RMEQEDNQNITWFP-IDWHGEHAVQNQCAVFCVRFSDDSEQIVCGTSEYSIHVFDVEQRR 280
Query: 174 KCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRAN--GVLMGHLE 231
+ + AH+ DVN+VCFAD +LI+S DD L KVWD+R + S G GV GH +
Sbjct: 281 RIRTIVNAHEDDVNSVCFADYGSNLIYSAGDDGLVKVWDKRAW-SDGDVIPVGVFAGHRD 339
Query: 232 GITFIDSRRDGRYFISNGKDQTTKLWDIRKMS-SNTTDNSR--LRDYDWDYRWMEYPSYA 288
G+T++DSR+D RY +SN KDQT K+WD+RK S + +R ++ WDYRW P
Sbjct: 340 GVTYVDSRQDERYLLSNSKDQTIKVWDLRKFSCQGGVEATRACVQSQHWDYRWQPAPP-- 397
Query: 289 RRLKHP--HDQSLATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQ 346
L P D S+ T +GHSVL TL+R FSPE +T +++IYTG + + +YD+V+G
Sbjct: 398 -GLCQPVQGDTSVMTLRGHSVLHTLVRAKFSPE-NTGRRFIYTGCARGEIVVYDIVTGTV 455
Query: 347 VAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRW 381
+L H A VR+C WHP ++S+SWD W
Sbjct: 456 SRRLKGHQAVVRECDWHPQENEIVSTSWDGVTTVW 490
Score = 40 (19.1 bits), Expect = 2.3e-58, Sum P(2) = 2.3e-58
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 5 REVNYSGRGRFSAADSCHVL 24
+++ +SGR +SCH L
Sbjct: 63 QQIAFSGRCTIGDPESCHQL 82
>FB|FBgn0034527 [details] [associations]
symbol:CG9945 species:7227 "Drosophila melanogaster"
[GO:0005875 "microtubule associated complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE013599 GO:GO:0005875 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 HSSP:P16649 KO:K11801 InterPro:IPR017399
PIRSF:PIRSF038135 GeneTree:ENSGT00700000104507 OMA:RMLHQRE
EMBL:AY075228 RefSeq:NP_611494.1 RefSeq:NP_725981.1 UniGene:Dm.5593
SMR:Q7JYQ4 STRING:Q7JYQ4 EnsemblMetazoa:FBtr0086225
EnsemblMetazoa:FBtr0086226 GeneID:37329 KEGG:dme:Dmel_CG9945
UCSC:CG9945-RA FlyBase:FBgn0034527 InParanoid:Q7JYQ4
OrthoDB:EOG4Q83CM GenomeRNAi:37329 NextBio:803134 Uniprot:Q7JYQ4
Length = 511
Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
Identities = 119/381 (31%), Positives = 203/381 (53%)
Query: 15 FSAADSCHVLSRYLPVNGPWKVDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKN-W 73
FS ++ + Y+P ++ + S+++ ++F+ GS + A Q+ +++Y+ K +
Sbjct: 103 FSKNQQRYISNLYIPNKKATRLMSLESKIFVTKFNRSGSKLLTACQDGFVRIYDGAKGTY 162
Query: 74 KIQKDIETKALRWTITDTSLSPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDF 133
+ I + + W+I D SP+ Y++ + I+ V + + + ++ GL
Sbjct: 163 HLLNRIRARDVEWSIIDADFSPNGEHFAYSTWSRSLFIMPV-NGGEDDCQWIDVN-GLP- 219
Query: 134 SADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHK---SDVNTVC 190
IFS+++S G +++ +++ + V D++ + + H+ DVN+VC
Sbjct: 220 -----SHRLAIFSLRYSPTGDKIIGGSNNSTVIVTDIRTRNTQI-LRTHRMPGKDVNSVC 273
Query: 191 FA-DETGHLIFSGSDDSLCKVWD-RRCFISKGRANGV--LMGHLEGITFIDSRRDGRYFI 246
F D+ ++I +G DD L KV+D R F S+ + V +GH +GIT+IDSR DG + +
Sbjct: 274 FLHDKDPNVIIAGCDDGLLKVYDLRTTFRSRDLSKSVASFIGHYDGITYIDSRNDGYHVL 333
Query: 247 SNGKDQTTKLWDIRKMSSNTTDNSRLRDY----DWDYRWMEYPSYARRLKHPH-----DQ 297
SN KDQ+ K+WDIR+ SN + SR R WDYRW P R +PH D
Sbjct: 334 SNSKDQSIKIWDIRQ-PSNMRNRSRSRQQVDPTTWDYRWNRVP---REFYNPHKPLEGDS 389
Query: 298 SLATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPV 357
S+ TY+GH V +TL+R FSP T Q+YIYTG + + IYD+++G ++ H +
Sbjct: 390 SIMTYRGHRVTKTLLRAKFSPMEQTGQRYIYTGCATGRIIIYDVLTGKIQEAIEGHRTVI 449
Query: 358 RDCCWHPIYPMLISSSWDCNI 378
RD WHP ++S SWD ++
Sbjct: 450 RDLDWHPDRSEIVSGSWDTHV 470
>DICTYBASE|DDB_G0291832 [details] [associations]
symbol:wdr23 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0291832 GenomeReviews:CM000155_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 EMBL:AAFI02000185 KO:K11801
RefSeq:XP_629959.1 ProteinModelPortal:Q54E28
EnsemblProtists:DDB0237531 GeneID:8628365 KEGG:ddi:DDB_G0291832
InParanoid:Q54E28 OMA:NIRISQH ProtClustDB:CLSZ2429513
Uniprot:Q54E28
Length = 661
Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 122/346 (35%), Positives = 179/346 (51%)
Query: 35 KVDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLS 94
K+ R+ T+ F ++ E ++ +D NW I + W I +S S
Sbjct: 268 KITSDGKRLMTASQDKMIRIFNTSNFEQIKEIQAIDINWSIIDTDYSPDQNWLIY-SSWS 326
Query: 95 PDQRFLVYASICAIV----NIVDVGSSARESL-ANVTIHKGL-----DFSAD-----GDE 139
Y +C + N D S R++ ++ TI G+ D++ +
Sbjct: 327 H------YIQLCRVNFNENNQYDTDFSRRKATNSSTTIRGGIKPTFEDYNESLFLDPNNF 380
Query: 140 DEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLI 199
D F +F +KFS + +E++ S+ I +YDL+ + H DVN+VC+ D TG++
Sbjct: 381 DRFCVFGLKFSPNNKEILCGCSNGEIIIYDLEGRQVVNHFRGHGRDVNSVCYLDHTGNIF 440
Query: 200 FSGSDDSLCKVWDRRCFISKGRANG---------VLMGHLEGITFIDSRRDGRYFISNGK 250
+GSDDSL +VWD+R G +G GH +G+T + S+ DG Y +SN K
Sbjct: 441 VTGSDDSLIRVWDKRSLDKSGSGSGSGDSNKPVGTFTGHYQGLTHVCSKDDGTYVLSNSK 500
Query: 251 DQTTKLWDIRKMSSNTTDNSRLRDYDWDYRWMEYPS-YA-----RRLKHPHDQSLATYKG 304
DQT KLWDIRKMS N T +WDYR+ YPS Y R + D SL +Y+G
Sbjct: 501 DQTAKLWDIRKMS-NPTSKPPSGGVNWDYRYYSYPSDYVMPNPLRNGSNSKDVSLMSYRG 559
Query: 305 HSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKL 350
H V++TLIRCYFSP +TAQKYIY+GS + +YIYD+++G V L
Sbjct: 560 HQVVQTLIRCYFSPIETTAQKYIYSGSFNGMIYIYDVLTGKLVKTL 605
Score = 331 (121.6 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 76/174 (43%), Positives = 103/174 (59%)
Query: 224 GVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSSNTTDN-SRLRDYDWDYRWM 282
G GH +G+T + S+ DG Y +SN KDQT KLWDIRKMS+ T+ S ++D+ Y
Sbjct: 474 GTFTGHYQGLTHVCSKDDGTYVLSNSKDQTAKLWDIRKMSNPTSKPPSGGVNWDYRYYSY 533
Query: 283 --EY--PSYARRLKHPHDQSLATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYI 338
+Y P+ R + D SL +Y+GH V++TLIRCYFSP +TAQKYIY+GS + +YI
Sbjct: 534 PSDYVMPNPLRNGSNSKDVSLMSYRGHQVVQTLIRCYFSPIETTAQKYIYSGSFNGMIYI 593
Query: 339 YDLVSGAQVAKL-DF-----HNAP-----VRDCCWHPIYPMLISSSWDCNIVRW 381
YD+++G V L D N P +RD W P LIS +WD + W
Sbjct: 594 YDVLTGKLVKTLTDIPQNNSQNNPQRLHLIRDLAWSPNSLNLISGNWDGRVTSW 647
Score = 152 (58.6 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 29/86 (33%), Positives = 52/86 (60%)
Query: 19 DSCHVLSRYLPVNGPWKVDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKD 78
++ + YLP+N V M SR++ + ++DG + ASQ+ I+++N N++ K+
Sbjct: 240 ENIRISQHYLPMNRAETVISMPSRIFCCKITSDGKRLMTASQDKMIRIFNTS-NFEQIKE 298
Query: 79 IETKALRWTITDTSLSPDQRFLVYAS 104
I+ + W+I DT SPDQ +L+Y+S
Sbjct: 299 IQAIDINWSIIDTDYSPDQNWLIYSS 324
Score = 68 (29.0 bits), Expect = 4.5e-10, Sum P(2) = 4.5e-10
Identities = 20/71 (28%), Positives = 31/71 (43%)
Query: 314 CYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAK-LDFHNAPVRDCCWHPIYPMLISS 372
C F ++S K I G S+ + IYDL G QV H V C+ + +
Sbjct: 384 CVFGLKFSPNNKEILCGCSNGEIIIYDL-EGRQVVNHFRGHGRDVNSVCYLDHTGNIFVT 442
Query: 373 SWDCNIVR-WE 382
D +++R W+
Sbjct: 443 GSDDSLIRVWD 453
Score = 52 (23.4 bits), Expect = 3.5e-32, Sum P(2) = 3.5e-32
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYD 169
IF K ++DG+ L+ A D I +++
Sbjct: 264 IFCCKITSDGKRLMTASQDKMIRIFN 289
Score = 42 (19.8 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 257 WDIRKMS-SNTTDNSRLRDYDWD 278
WD R S SN D+ R +D DW+
Sbjct: 640 WDGRVTSWSNFYDH-RYKDDDWE 661
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 230 (86.0 bits), Expect = 4.1e-20, Sum P(2) = 4.1e-20
Identities = 74/261 (28%), Positives = 121/261 (46%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
I + +++DG ++V+A D + +D++ K ++ H S VN+ C LI SGS
Sbjct: 99 ILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGS 158
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGH-LEGITFIDSRRDGRYFISNGKDQTTKLWDIRKM 262
DD K+WD R +G + + ++F D+ + F + G D K+WD+RK
Sbjct: 159 DDGTAKLWDMR---QRGAIQTFPDKYQITAVSFSDAA--DKIF-TGGVDNDVKVWDLRKG 212
Query: 263 SSNTT---------------DNSRLRDYDWDYR---WMEYPSYARRLKHPHDQSLATYKG 304
+ T D S L D + W P YA P ++ + ++G
Sbjct: 213 EATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRP-YA-----PQNRCVKIFEG 266
Query: 305 H--SVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCW 362
H + + L++C +SP+ + + GSSD V+I+D S + KL H V +C +
Sbjct: 267 HQHNFEKNLLKCSWSPDGTK----VTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVF 322
Query: 363 HPIYPMLISSSWDCNIVRWEI 383
HP P++ S S D NI EI
Sbjct: 323 HPTEPIIGSCSSDKNIYLGEI 343
Score = 136 (52.9 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 29/123 (23%), Positives = 58/123 (47%)
Query: 140 DEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLI 199
D++ I +V FS ++ G DN + V+DL+ + ++ + H+ + + + + +L+
Sbjct: 179 DKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLL 238
Query: 200 FSGSDDSLCKVWDRRCFISKGRANGVLMGHL----EGITFIDSRRDGRYFISNGKDQTTK 255
+G D+ LC VWD R + + R + GH + + DG + D+
Sbjct: 239 TNGMDNKLC-VWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVH 297
Query: 256 LWD 258
+WD
Sbjct: 298 IWD 300
Score = 58 (25.5 bits), Expect = 4.1e-20, Sum P(2) = 4.1e-20
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 36 VDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVD---KNWKIQKDIETKAL--RWTITD 90
+ G S VYT +F+ G+ + S + I ++ V KN+ + K + L WT
Sbjct: 49 LSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDG 108
Query: 91 T---SLSPDQ 97
+ S SPD+
Sbjct: 109 SQIVSASPDK 118
Score = 55 (24.4 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 11/43 (25%), Positives = 25/43 (58%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIE 80
G + + +++DGS V+AS + ++ ++V+ +I+K E
Sbjct: 94 GHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAE 136
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 209 (78.6 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 64/252 (25%), Positives = 119/252 (47%)
Query: 143 GIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSG 202
GI + +S D + + +A D I ++D+++ K + HK V V F ++ +LI SG
Sbjct: 90 GISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQS-NLIVSG 148
Query: 203 SDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI--- 259
S D ++WD ++ G ++ H + +T + RDG +S D T ++WD
Sbjct: 149 SFDENVRIWD----VNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTG 204
Query: 260 RKMSSNTTDNSR---LRDYDWDYRWMEYPSYARRLK----HPHDQSLATYKGHSVLRTLI 312
+ +++ +T++ + + + +++ + L+ + + + L TY GH +
Sbjct: 205 QLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKY-- 262
Query: 313 RCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISS 372
C FS T K+I TGS DN +YIY+L + V L H V HP ++ S
Sbjct: 263 -CIFSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPTENIIASG 321
Query: 373 SW--DCNIVRWE 382
+ D ++ W+
Sbjct: 322 ALEKDRSVKIWK 333
Score = 152 (58.6 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 33/116 (28%), Positives = 56/116 (48%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
I SVKFS DG+ L +A +D I ++ K + HK ++ + ++ ++ LI S S
Sbjct: 49 ISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDS-KLICSAS 107
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI 259
DD K+WD + G+ L GH E + + +S D+ ++WD+
Sbjct: 108 DDKTIKIWD----VESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDV 159
Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
Identities = 38/166 (22%), Positives = 79/166 (47%)
Query: 48 FSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQRFLVYASICA 107
F+ DG+ V+ S + +++++ ++ I T+ + ++ SP+ +F++ ++
Sbjct: 180 FNRDGTLVVSGSYDGTVRIWDTTTG-QLLNTISTEDGK-EVSFVKFSPNGKFVLAGTLDN 237
Query: 108 IVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYV 167
+ + ++ ++ L T HK +++ IFS T G+ +V DN IY+
Sbjct: 238 TLRLWSYNNN-KKCLKTYTGHKN---------EKYCIFSTFSVTCGKWIVTGSEDNLIYI 287
Query: 168 YDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS--DDSLCKVW 211
Y+LQ + + H+ V TV T ++I SG+ D K+W
Sbjct: 288 YNLQTREIVQTLAGHEDVVLTVA-CHPTENIIASGALEKDRSVKIW 332
Score = 68 (29.0 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 21/83 (25%), Positives = 41/83 (49%)
Query: 34 WKVDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSL 93
+ + G + + +FS DG + +AS + IK++ + K ++ +E + I+D +
Sbjct: 40 YTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGA-YDGKFERTLEGH--KEGISDIAW 96
Query: 94 SPDQRFLVYASICAIVNIVDVGS 116
S D + + AS + I DV S
Sbjct: 97 SQDSKLICSASDDKTIKIWDVES 119
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 210 (79.0 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 79/305 (25%), Positives = 132/305 (43%)
Query: 87 TITDTSLSPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFS 146
T+ + SPD + L S N +D+ SA L +G S I+S
Sbjct: 794 TVESLAFSPDGKLLASGSYD---NTIDLWDSATGELLQT--FEGHPHS---------IWS 839
Query: 147 VKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDS 206
V F+ DG+EL +A D+ I ++DL + + +H V +V F+ + G L+ S S DS
Sbjct: 840 VAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPD-GKLLASSSLDS 898
Query: 207 LCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW-----DIRK 261
KVW+ + G L G + + DG+ S + T KLW ++ +
Sbjct: 899 TIKVWNP----ATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQ 954
Query: 262 MSSNTTDNSRLRDYDWDYRWMEYPSYARRLK---HPHDQSLATYKGHSV-LRTLIRCYFS 317
+ + R + D + + S +K + T+KGH + +R + FS
Sbjct: 955 TLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVA---FS 1011
Query: 318 PEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCN 377
P+ K++ +GS DN++ ++DL + L+ H+ V + P L SSS D
Sbjct: 1012 PD----GKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDST 1067
Query: 378 IVRWE 382
I W+
Sbjct: 1068 IKLWD 1072
Score = 208 (78.3 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 71/254 (27%), Positives = 116/254 (45%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
I +V FS DG+ LV+ DN I ++DL ++ + H V+ V F+ + L S S
Sbjct: 1005 IRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLA-SSS 1063
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWD--IRK 261
DS K+WD + G L GH +G+ + DG+ SN D T KLW+ +
Sbjct: 1064 LDSTIKLWDS----ATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGE 1119
Query: 262 MSSNTTDNSRLRD---YDWDYRWMEYPSYARRLK---HPHDQSLATYKGHSV-LRTLIRC 314
+ T S D + D + + Y +K + L T +GHS +++++
Sbjct: 1120 LQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVV-- 1177
Query: 315 YFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSW 374
FSP+ K + +GS D + ++D +G + + H+ V + P +L SSS+
Sbjct: 1178 -FSPD----GKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASSSY 1232
Query: 375 DCNIVRWEIPGIGE 388
I W+ P GE
Sbjct: 1233 GETIKLWD-PVTGE 1245
Score = 182 (69.1 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 62/251 (24%), Positives = 110/251 (43%)
Query: 146 SVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDD 205
SV FS DG++L ++ SD I +++ + H + V F+ + HL+ SGSDD
Sbjct: 965 SVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLV-SGSDD 1023
Query: 206 SLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWD-----IR 260
+ K+WD ++ L H + + D + S+ D T KLWD ++
Sbjct: 1024 NTIKLWD----LATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQ 1079
Query: 261 KMSSNTTDNSRLRDYDWDYRWMEYPSYARRLK--HPHDQSLA-TYKGHSVLRTLIRCYFS 317
+ + R + D + + SY +K +P L T G S + FS
Sbjct: 1080 RTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVA--FS 1137
Query: 318 PEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCN 377
P+ K + +G D+++ ++D +G + L+ H+ ++ + P +L S S+D
Sbjct: 1138 PD----GKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQT 1193
Query: 378 IVRWEIPGIGE 388
W+ P GE
Sbjct: 1194 AKLWD-PATGE 1203
Score = 179 (68.1 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 65/252 (25%), Positives = 113/252 (44%)
Query: 139 EDEFG-IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGH 197
E+ G + SV FS DG++LV+ D+ + ++D + + H V ++ F+ + G
Sbjct: 747 ENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPD-GK 805
Query: 198 LIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
L+ SGS D+ +WD + G GH I + DG+ S D T K+W
Sbjct: 806 LLASGSYDNTIDLWDS----ATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIW 861
Query: 258 DIR--KMSSNTTDNSR-LRD--YDWDYRWMEYPSYARRLK--HPHDQSLA-TYKGHSVLR 309
D+ ++ +S+ +R + D + + S +K +P L + +G S
Sbjct: 862 DLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWV 921
Query: 310 TLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPML 369
+ FSP+ K + +GS N+V +++ +G + L+ H+ VR + P L
Sbjct: 922 KSVA--FSPD----GKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQL 975
Query: 370 ISSSWDCNIVRW 381
SSS D I W
Sbjct: 976 ASSSSDTTIKLW 987
Score = 175 (66.7 bits), Expect = 8.5e-11, Sum P(2) = 8.5e-11
Identities = 62/257 (24%), Positives = 110/257 (42%)
Query: 138 DEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGH 197
D + SV FS DG+ L ++ D+ I V++ + + V +V F+ + G
Sbjct: 873 DSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPD-GK 931
Query: 198 LIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
+ SGS+ + K+W+ + G L GH + + + DG+ S+ D T KLW
Sbjct: 932 KLASGSEKNTVKLWNP----ATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLW 987
Query: 258 DIRKMSSNTTDNSRLRDYDWDYRWMEYPSYARRLKHPHDQS------LATYKGHSVLRTL 311
+ S+ + +D R + + + L D + LAT + L
Sbjct: 988 N----STTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDH 1043
Query: 312 IRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLIS 371
R + +S K + + S D+++ ++D +G L+ H+ VR + P +L S
Sbjct: 1044 SRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLAS 1103
Query: 372 SSWDCNIVRWEIPGIGE 388
+S+D I W P GE
Sbjct: 1104 NSYDGTIKLWN-PLTGE 1119
Score = 134 (52.2 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 57/210 (27%), Positives = 89/210 (42%)
Query: 56 VAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTS-------LSPDQRFLVYASICAI 108
VA S + V D N D+ T L+ ++ D S SPD + L +S+ +
Sbjct: 1008 VAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDST 1067
Query: 109 VNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVY 168
+ + D S+ E L + +G G+ SV FS DG+ L + D I ++
Sbjct: 1068 IKLWD--SATGE----------LQRTLEGHSQ--GVRSVTFSPDGKLLASNSYDGTIKLW 1113
Query: 169 DLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMG 228
+ + + V++V F+ + G + SG DS K+WD + G L G
Sbjct: 1114 NPLTGELQQTLTGRSDWVDSVAFSPD-GKQLASGYYDSTIKLWDS----ATGELLQTLEG 1168
Query: 229 HLEGITFIDSRRDGRYFISNGKDQTTKLWD 258
H + I + DG+ S DQT KLWD
Sbjct: 1169 HSDRIQSVVFSPDGKLLASGSYDQTAKLWD 1198
Score = 125 (49.1 bits), Expect = 0.00034, P = 0.00034
Identities = 44/171 (25%), Positives = 76/171 (44%)
Query: 227 MGHLEGITFIDSRRDGRYFISNGKDQTTKLWD------IRKMSSNTTDNSRLRDYDWDYR 280
+G +E + F DG+ +S D T K+WD ++ + ++ L + D +
Sbjct: 750 LGPVESVVFSP---DGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLA-FSPDGK 805
Query: 281 WMEYPSYARRLK---HPHDQSLATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVY 337
+ SY + + L T++GH ++ F+P+ K + + S D+++
Sbjct: 806 LLASGSYDNTIDLWDSATGELLQTFEGHP--HSIWSVAFAPD----GKELASASDDSTIK 859
Query: 338 IYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWEIPGIGE 388
I+DL +G LD H+ VR + P +L SSS D I W P GE
Sbjct: 860 IWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWN-PATGE 909
Score = 76 (31.8 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 22/103 (21%), Positives = 55/103 (53%)
Query: 37 DGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPD 96
+G +++ F+ DG +AS +S IK++++ ++Q+ +++ + ++ + SPD
Sbjct: 831 EGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATG-ELQQTLDSHSQ--SVRSVAFSPD 887
Query: 97 QRFLVYASICAIVNIVDVGSSA-RESLANVTIH-KGLDFSADG 137
+ L +S+ + + + + + ++SL + K + FS DG
Sbjct: 888 GKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDG 930
Score = 75 (31.5 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16
Identities = 28/108 (25%), Positives = 51/108 (47%)
Query: 36 VDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSP 95
+D + V + FS DG ++S +S IKV+N ++Q+ +E ++ W + + SP
Sbjct: 872 LDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWN-PATGELQQSLEGRS-GW-VKSVAFSP 928
Query: 96 DQRFLVYASICAIVNIVDVGSSARESLANVTIH----KGLDFSADGDE 139
D + L S V + + + E L + H + + FS DG +
Sbjct: 929 DGKKLASGSEKNTVKLWNPATG--ELLQTLEGHSQSVRSVAFSPDGKQ 974
Score = 58 (25.5 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 23/104 (22%), Positives = 49/104 (47%)
Query: 36 VDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSP 95
+DG + V + FS DG + S ++ I +++ +Q W++ + +P
Sbjct: 788 LDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSV---AFAP 844
Query: 96 DQRFLVYASICAIVNIVDVGSSA-RESL-ANVTIHKGLDFSADG 137
D + L AS + + I D+ + +++L ++ + + FS DG
Sbjct: 845 DGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDG 888
Score = 55 (24.4 bits), Expect = 3.2e-14, Sum P(2) = 3.2e-14
Identities = 22/96 (22%), Positives = 43/96 (44%)
Query: 48 FSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQRFLVYASICA 107
FS DG V+ S + +K+++ ++ + ++ + T+ + SPD + L S
Sbjct: 758 FSPDGKQLVSGSYDDTVKIWD-PATGELLQTLDGHS--GTVESLAFSPDGKLLASGSYDN 814
Query: 108 IVNIVDVGSSARESLANVTIHK----GLDFSADGDE 139
+++ D S+ E L H + F+ DG E
Sbjct: 815 TIDLWD--SATGELLQTFEGHPHSIWSVAFAPDGKE 848
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 210 (79.0 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 68/253 (26%), Positives = 113/253 (44%)
Query: 141 EFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIF 200
+ GI V +S+D LV+A D + ++D+ + KC + H + V C + +LI
Sbjct: 61 KLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV-FCCNFNPQSNLIV 119
Query: 201 SGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
SGS D ++WD + G+ L H + ++ + RDG +S+ D ++WD
Sbjct: 120 SGSFDESVRIWD----VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 175
Query: 261 KMSSNTT----DNSRLR--DYDWDYRWMEYPSYARRLK---HPHDQSLATYKGHSVLRTL 311
T DN + + + +++ + LK + + L TY GH +
Sbjct: 176 SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYC 235
Query: 312 IRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLIS 371
I FS T K+I +GS DN VYI++L + V KL H V HP ++ S
Sbjct: 236 IFANFSV---TGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIAS 292
Query: 372 SSW--DCNIVRWE 382
++ D I W+
Sbjct: 293 AALENDKTIKLWK 305
Score = 149 (57.5 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 31/117 (26%), Positives = 59/117 (50%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
+ SVKFS +G+ L ++ +D I ++ K I HK ++ V ++ ++ +L+ S S
Sbjct: 22 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS-NLLVSAS 80
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
DD K+WD +S G+ L GH + + +S D++ ++WD++
Sbjct: 81 DDKTLKIWD----VSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 133
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 51/226 (22%), Positives = 96/226 (42%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQ 97
G ++ V+ F+ + V+ S + ++++++V K K K + + ++ + D
Sbjct: 101 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV-KTGKCLKTLPAHSD--PVSAVHFNRDG 157
Query: 98 RFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELV 157
+V +S + I D S + L + D+D + VKFS +G+ ++
Sbjct: 158 SLIVSSSYDGLCRIWDTASG--QCLKTLI-----------DDDNPPVSFVKFSPNGKYIL 204
Query: 158 AAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVC--FADETGHLIFSGSDDSLCKVWDRRC 215
AA DN + ++D KC HK++ + F+ G I SGS+D+L +W+ +
Sbjct: 205 AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT 264
Query: 216 --FISKGRANGVLMGHLEGITFIDSRRDGRYFISNG--KDQTTKLW 257
+ K L GH + + S D+T KLW
Sbjct: 265 KEIVQK------LQGHTDVVISTACHPTENIIASAALENDKTIKLW 304
Score = 118 (46.6 bits), Expect = 0.00024, P = 0.00024
Identities = 44/167 (26%), Positives = 74/167 (44%)
Query: 226 LMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSSNTTDNSR---LRDYDW--DYR 280
L GH + ++ + +G + S+ D+ K+W T + + D W D
Sbjct: 15 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 74
Query: 281 WMEYPSYARRLKH---PHDQSLATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVY 337
+ S + LK + L T KGHS + C F+P+ I +GS D SV
Sbjct: 75 LLVSASDDKTLKIWDVSSGKCLKTLKGHS--NYVFCCNFNPQ----SNLIVSGSFDESVR 128
Query: 338 IYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWD--CNIVRWE 382
I+D+ +G + L H+ PV ++ +++SSS+D C I W+
Sbjct: 129 IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI--WD 173
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 210 (79.0 bits), Expect = 6.7e-15, P = 6.7e-15
Identities = 68/253 (26%), Positives = 113/253 (44%)
Query: 141 EFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIF 200
+ GI V +S+D LV+A D + ++D+ + KC + H + V C + +LI
Sbjct: 87 KLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV-FCCNFNPQSNLIV 145
Query: 201 SGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
SGS D ++WD + G+ L H + ++ + RDG +S+ D ++WD
Sbjct: 146 SGSFDESVRIWD----VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 201
Query: 261 KMSSNTT----DNSRLR--DYDWDYRWMEYPSYARRLK---HPHDQSLATYKGHSVLRTL 311
T DN + + + +++ + LK + + L TY GH +
Sbjct: 202 SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYC 261
Query: 312 IRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLIS 371
I FS T K+I +GS DN VYI++L + V KL H V HP ++ S
Sbjct: 262 IFANFSV---TGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIAS 318
Query: 372 SSW--DCNIVRWE 382
++ D I W+
Sbjct: 319 AALENDKTIKLWK 331
Score = 149 (57.5 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 31/117 (26%), Positives = 59/117 (50%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
+ SVKFS +G+ L ++ +D I ++ K I HK ++ V ++ ++ +L+ S S
Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS-NLLVSAS 106
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
DD K+WD +S G+ L GH + + +S D++ ++WD++
Sbjct: 107 DDKTLKIWD----VSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
Identities = 51/226 (22%), Positives = 96/226 (42%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQ 97
G ++ V+ F+ + V+ S + ++++++V K K K + + ++ + D
Sbjct: 127 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV-KTGKCLKTLPAHSD--PVSAVHFNRDG 183
Query: 98 RFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELV 157
+V +S + I D S + L + D+D + VKFS +G+ ++
Sbjct: 184 SLIVSSSYDGLCRIWDTASG--QCLKTLI-----------DDDNPPVSFVKFSPNGKYIL 230
Query: 158 AAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVC--FADETGHLIFSGSDDSLCKVWDRRC 215
AA DN + ++D KC HK++ + F+ G I SGS+D+L +W+ +
Sbjct: 231 AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT 290
Query: 216 --FISKGRANGVLMGHLEGITFIDSRRDGRYFISNG--KDQTTKLW 257
+ K L GH + + S D+T KLW
Sbjct: 291 KEIVQK------LQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 118 (46.6 bits), Expect = 0.00028, P = 0.00028
Identities = 44/167 (26%), Positives = 74/167 (44%)
Query: 226 LMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSSNTTDNSR---LRDYDW--DYR 280
L GH + ++ + +G + S+ D+ K+W T + + D W D
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 281 WMEYPSYARRLKH---PHDQSLATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVY 337
+ S + LK + L T KGHS + C F+P+ I +GS D SV
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHS--NYVFCCNFNPQ----SNLIVSGSFDESVR 154
Query: 338 IYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWD--CNIVRWE 382
I+D+ +G + L H+ PV ++ +++SSS+D C I W+
Sbjct: 155 IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI--WD 199
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 210 (79.0 bits), Expect = 6.7e-15, P = 6.7e-15
Identities = 68/253 (26%), Positives = 113/253 (44%)
Query: 141 EFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIF 200
+ GI V +S+D LV+A D + ++D+ + KC + H + V C + +LI
Sbjct: 87 KLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV-FCCNFNPQSNLIV 145
Query: 201 SGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
SGS D ++WD + G+ L H + ++ + RDG +S+ D ++WD
Sbjct: 146 SGSFDESVRIWD----VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 201
Query: 261 KMSSNTT----DNSRLR--DYDWDYRWMEYPSYARRLK---HPHDQSLATYKGHSVLRTL 311
T DN + + + +++ + LK + + L TY GH +
Sbjct: 202 SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYC 261
Query: 312 IRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLIS 371
I FS T K+I +GS DN VYI++L + V KL H V HP ++ S
Sbjct: 262 IFANFSV---TGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIAS 318
Query: 372 SSW--DCNIVRWE 382
++ D I W+
Sbjct: 319 AALENDKTIKLWK 331
Score = 152 (58.6 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 39/146 (26%), Positives = 70/146 (47%)
Query: 116 SSARESLAN-VTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANK 174
SSA +S V + L F+ G + SVKFS +G+ L ++ +D I ++ K
Sbjct: 21 SSATQSKPTPVKPNYALKFTLAGHTK--AVSSVKFSPNGEWLASSSADKLIKIWGAYDGK 78
Query: 175 CSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGIT 234
I HK ++ V ++ ++ +L+ S SDD K+WD +S G+ L GH +
Sbjct: 79 FEKTISGHKLGISDVAWSSDS-NLLVSASDDKTLKIWD----VSSGKCLKTLKGHSNYVF 133
Query: 235 FIDSRRDGRYFISNGKDQTTKLWDIR 260
+ +S D++ ++WD++
Sbjct: 134 CCNFNPQSNLIVSGSFDESVRIWDVK 159
Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
Identities = 51/226 (22%), Positives = 96/226 (42%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQ 97
G ++ V+ F+ + V+ S + ++++++V K K K + + ++ + D
Sbjct: 127 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV-KTGKCLKTLPAHSD--PVSAVHFNRDG 183
Query: 98 RFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELV 157
+V +S + I D S + L + D+D + VKFS +G+ ++
Sbjct: 184 SLIVSSSYDGLCRIWDTASG--QCLKTLI-----------DDDNPPVSFVKFSPNGKYIL 230
Query: 158 AAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVC--FADETGHLIFSGSDDSLCKVWDRRC 215
AA DN + ++D KC HK++ + F+ G I SGS+D+L +W+ +
Sbjct: 231 AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT 290
Query: 216 --FISKGRANGVLMGHLEGITFIDSRRDGRYFISNG--KDQTTKLW 257
+ K L GH + + S D+T KLW
Sbjct: 291 KEIVQK------LQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 210 (79.0 bits), Expect = 6.7e-15, P = 6.7e-15
Identities = 68/253 (26%), Positives = 113/253 (44%)
Query: 141 EFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIF 200
+ GI V +S+D LV+A D + ++D+ + KC + H + V C + +LI
Sbjct: 87 KLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV-FCCNFNPQSNLIV 145
Query: 201 SGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
SGS D ++WD + G+ L H + ++ + RDG +S+ D ++WD
Sbjct: 146 SGSFDESVRIWD----VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 201
Query: 261 KMSSNTT----DNSRLR--DYDWDYRWMEYPSYARRLK---HPHDQSLATYKGHSVLRTL 311
T DN + + + +++ + LK + + L TY GH +
Sbjct: 202 SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYC 261
Query: 312 IRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLIS 371
I FS T K+I +GS DN VYI++L + V KL H V HP ++ S
Sbjct: 262 IFANFSV---TGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIAS 318
Query: 372 SSW--DCNIVRWE 382
++ D I W+
Sbjct: 319 AALENDKTIKLWK 331
Score = 152 (58.6 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 39/146 (26%), Positives = 70/146 (47%)
Query: 116 SSARESLAN-VTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANK 174
SSA +S V + L F+ G + SVKFS +G+ L ++ +D I ++ K
Sbjct: 21 SSATQSKPTPVKPNYALKFTLAGHTK--AVSSVKFSPNGEWLASSSADKLIKIWGAYDGK 78
Query: 175 CSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGIT 234
I HK ++ V ++ ++ +L+ S SDD K+WD +S G+ L GH +
Sbjct: 79 FEKTISGHKLGISDVAWSSDS-NLLVSASDDKTLKIWD----VSSGKCLKTLKGHSNYVF 133
Query: 235 FIDSRRDGRYFISNGKDQTTKLWDIR 260
+ +S D++ ++WD++
Sbjct: 134 CCNFNPQSNLIVSGSFDESVRIWDVK 159
Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
Identities = 51/226 (22%), Positives = 96/226 (42%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQ 97
G ++ V+ F+ + V+ S + ++++++V K K K + + ++ + D
Sbjct: 127 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV-KTGKCLKTLPAHSD--PVSAVHFNRDG 183
Query: 98 RFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELV 157
+V +S + I D S + L + D+D + VKFS +G+ ++
Sbjct: 184 SLIVSSSYDGLCRIWDTASG--QCLKTLI-----------DDDNPPVSFVKFSPNGKYIL 230
Query: 158 AAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVC--FADETGHLIFSGSDDSLCKVWDRRC 215
AA DN + ++D KC HK++ + F+ G I SGS+D+L +W+ +
Sbjct: 231 AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT 290
Query: 216 --FISKGRANGVLMGHLEGITFIDSRRDGRYFISNG--KDQTTKLW 257
+ K L GH + + S D+T KLW
Sbjct: 291 KEIVQK------LQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 210 (79.0 bits), Expect = 6.7e-15, P = 6.7e-15
Identities = 68/253 (26%), Positives = 113/253 (44%)
Query: 141 EFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIF 200
+ GI V +S+D LV+A D + ++D+ + KC + H + V C + +LI
Sbjct: 87 KLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV-FCCNFNPQSNLIV 145
Query: 201 SGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
SGS D ++WD + G+ L H + ++ + RDG +S+ D ++WD
Sbjct: 146 SGSFDESVRIWD----VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 201
Query: 261 KMSSNTT----DNSRLR--DYDWDYRWMEYPSYARRLK---HPHDQSLATYKGHSVLRTL 311
T DN + + + +++ + LK + + L TY GH +
Sbjct: 202 SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYC 261
Query: 312 IRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLIS 371
I FS T K+I +GS DN VYI++L + V KL H V HP ++ S
Sbjct: 262 IFANFSV---TGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIAS 318
Query: 372 SSW--DCNIVRWE 382
++ D I W+
Sbjct: 319 AALENDKTIKLWK 331
Score = 152 (58.6 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 39/146 (26%), Positives = 70/146 (47%)
Query: 116 SSARESLAN-VTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANK 174
SSA +S V + L F+ G + SVKFS +G+ L ++ +D I ++ K
Sbjct: 21 SSATQSKPTPVKPNYALKFTLAGHTK--AVSSVKFSPNGEWLASSSADKLIKIWGAYDGK 78
Query: 175 CSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGIT 234
I HK ++ V ++ ++ +L+ S SDD K+WD +S G+ L GH +
Sbjct: 79 FEKTISGHKLGISDVAWSSDS-NLLVSASDDKTLKIWD----VSSGKCLKTLKGHSNYVF 133
Query: 235 FIDSRRDGRYFISNGKDQTTKLWDIR 260
+ +S D++ ++WD++
Sbjct: 134 CCNFNPQSNLIVSGSFDESVRIWDVK 159
Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
Identities = 51/226 (22%), Positives = 96/226 (42%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQ 97
G ++ V+ F+ + V+ S + ++++++V K K K + + ++ + D
Sbjct: 127 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV-KTGKCLKTLPAHSD--PVSAVHFNRDG 183
Query: 98 RFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELV 157
+V +S + I D S + L + D+D + VKFS +G+ ++
Sbjct: 184 SLIVSSSYDGLCRIWDTASG--QCLKTLI-----------DDDNPPVSFVKFSPNGKYIL 230
Query: 158 AAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVC--FADETGHLIFSGSDDSLCKVWDRRC 215
AA DN + ++D KC HK++ + F+ G I SGS+D+L +W+ +
Sbjct: 231 AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT 290
Query: 216 --FISKGRANGVLMGHLEGITFIDSRRDGRYFISNG--KDQTTKLW 257
+ K L GH + + S D+T KLW
Sbjct: 291 KEIVQK------LQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 210 (79.0 bits), Expect = 6.7e-15, P = 6.7e-15
Identities = 68/253 (26%), Positives = 113/253 (44%)
Query: 141 EFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIF 200
+ GI V +S+D LV+A D + ++D+ + KC + H + V C + +LI
Sbjct: 87 KLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV-FCCNFNPQSNLIV 145
Query: 201 SGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
SGS D ++WD + G+ L H + ++ + RDG +S+ D ++WD
Sbjct: 146 SGSFDESVRIWD----VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 201
Query: 261 KMSSNTT----DNSRLR--DYDWDYRWMEYPSYARRLK---HPHDQSLATYKGHSVLRTL 311
T DN + + + +++ + LK + + L TY GH +
Sbjct: 202 SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYC 261
Query: 312 IRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLIS 371
I FS T K+I +GS DN VYI++L + V KL H V HP ++ S
Sbjct: 262 IFANFSV---TGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIAS 318
Query: 372 SSW--DCNIVRWE 382
++ D I W+
Sbjct: 319 AALENDKTIKLWK 331
Score = 152 (58.6 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 39/146 (26%), Positives = 70/146 (47%)
Query: 116 SSARESLAN-VTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANK 174
SSA +S V + L F+ G + SVKFS +G+ L ++ +D I ++ K
Sbjct: 21 SSATQSKPTPVKPNYALKFTLAGHTK--AVSSVKFSPNGEWLASSSADKLIKIWGAYDGK 78
Query: 175 CSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGIT 234
I HK ++ V ++ ++ +L+ S SDD K+WD +S G+ L GH +
Sbjct: 79 FEKTISGHKLGISDVAWSSDS-NLLVSASDDKTLKIWD----VSSGKCLKTLKGHSNYVF 133
Query: 235 FIDSRRDGRYFISNGKDQTTKLWDIR 260
+ +S D++ ++WD++
Sbjct: 134 CCNFNPQSNLIVSGSFDESVRIWDVK 159
Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
Identities = 51/226 (22%), Positives = 96/226 (42%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQ 97
G ++ V+ F+ + V+ S + ++++++V K K K + + ++ + D
Sbjct: 127 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV-KTGKCLKTLPAHSD--PVSAVHFNRDG 183
Query: 98 RFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELV 157
+V +S + I D S + L + D+D + VKFS +G+ ++
Sbjct: 184 SLIVSSSYDGLCRIWDTASG--QCLKTLI-----------DDDNPPVSFVKFSPNGKYIL 230
Query: 158 AAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVC--FADETGHLIFSGSDDSLCKVWDRRC 215
AA DN + ++D KC HK++ + F+ G I SGS+D+L +W+ +
Sbjct: 231 AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT 290
Query: 216 --FISKGRANGVLMGHLEGITFIDSRRDGRYFISNG--KDQTTKLW 257
+ K L GH + + S D+T KLW
Sbjct: 291 KEIVQK------LQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 208 (78.3 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 70/257 (27%), Positives = 117/257 (45%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETG-HLIFSG 202
+ + ++TDG L +A +D + V+D + + R+ H S VN+ C+ G L+ +G
Sbjct: 112 VMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRGPQLVCTG 170
Query: 203 SDDSLCKVWDRRCFISKGRANGVLMGHLE--GITFIDSRRDGRYFISNGKDQTTKLWDIR 260
SDD K+WD I K A + +TF D+ IS G D K+WD+R
Sbjct: 171 SDDGTVKLWD----IRKKAAIQTFQNTYQVLAVTFNDTSDQ---IISGGIDNDIKVWDLR 223
Query: 261 K------MSSNTTDNSRLR-DYDWDYRWMEYPSYARRLKH-----PHDQSLATYKG--HS 306
+ M + + L + Y R+ P ++ + ++G H+
Sbjct: 224 QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHN 283
Query: 307 VLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIY 366
+ L+RC +SP+ S I GS+D VY++D S + KL H + + +HP
Sbjct: 284 FEKNLLRCSWSPDGSK----IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDE 339
Query: 367 PMLISSSWDCNIVRWEI 383
P++IS+S D + EI
Sbjct: 340 PIIISASSDKRLYMGEI 356
Score = 127 (49.8 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 29/124 (23%), Positives = 60/124 (48%)
Query: 139 EDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHL 198
++ + + +V F+ ++++ G DN I V+DL+ NK + + H V + + E +L
Sbjct: 191 QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYL 250
Query: 199 IFSGSDDSLCKVWDRRCFISKGRANGVLMGHL----EGITFIDSRRDGRYFISNGKDQTT 254
+ + D+++ +VWD R F K R + G++ + + DG + D+
Sbjct: 251 LSNAMDNTV-RVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFV 309
Query: 255 KLWD 258
+WD
Sbjct: 310 YVWD 313
Score = 127 (49.8 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 39/134 (29%), Positives = 58/134 (43%)
Query: 137 GDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCS--LRIPAHKSDVNTVCFADE 194
G E E ++ KF +G L +AG D I ++++ + C + H V + + +
Sbjct: 64 GHEGE--VYCCKFHPNGSTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMELHYNTD 120
Query: 195 TGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQ-T 253
G ++FS S D VWD G L GH + R G + G D T
Sbjct: 121 -GSMLFSASTDKTVAVWDSET----GERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGT 175
Query: 254 TKLWDIRKMSSNTT 267
KLWDIRK ++ T
Sbjct: 176 VKLWDIRKKAAIQT 189
Score = 124 (48.7 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 39/166 (23%), Positives = 79/166 (47%)
Query: 42 RVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQRFLV 101
+V F++ ++ +++IKV+++ +N K+ + A ++T SLS + +L+
Sbjct: 195 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQN-KLTYTMRGHAD--SVTGLSLSSEGSYLL 251
Query: 102 YASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGS 161
++ V + DV A + V I +G + E + +S DG ++ A +
Sbjct: 252 SNAMDNTVRVWDVRPFAPKERC-VKIFQG-----NVHNFEKNLLRCSWSPDGSKIAAGSA 305
Query: 162 DNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSL 207
D F+YV+D + + ++P H +N V F + +I + SD L
Sbjct: 306 DRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSDKRL 351
Score = 46 (21.3 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 8/40 (20%), Positives = 21/40 (52%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQK 77
G + V ++ DGS +AS + + V++ + ++++
Sbjct: 107 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR 146
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 205 (77.2 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 70/279 (25%), Positives = 129/279 (46%)
Query: 116 SSARESLANVTIHKGLDFSADGDED----EFGIFSVKFSTDGQELVAAGSDNFIYVYDLQ 171
+SA +++ TI+ D A+ ++ E GI V FS+D + +V+A D + ++D++
Sbjct: 42 ASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVE 101
Query: 172 ANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLE 231
+ H + V F ++ ++I SGS D ++WD ++ G+ VL H +
Sbjct: 102 TGSLIKTLIGHTNYAFCVNFNPQS-NMIVSGSFDETVRIWD----VTTGKCLKVLPAHSD 156
Query: 232 GITFIDSRRDGRYFISNGKDQTTKLWD------IRKMSSNTTDNSRLRDYDWDYRWMEYP 285
+T +D RDG +S+ D ++WD ++ + + + + +++
Sbjct: 157 PVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVG 216
Query: 286 SYARRLKHPHDQS---LATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLV 342
+ L+ + S L TY GH + I FS T K I +GS DN V++++L
Sbjct: 217 TLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSV---TNGKRIVSGSEDNCVHMWELN 273
Query: 343 SGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRW 381
S + KL+ H V + HP ++ S S D + W
Sbjct: 274 SKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
Score = 179 (68.1 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 59/222 (26%), Positives = 99/222 (44%)
Query: 40 NSRVYTSQFSNDGSFFVAASQESNIKVYNVDK-NWKIQKDI-ETKALRWTITDTSLSPDQ 97
N V + +FS+DG +AS + I+ Y ++ N I + + E I+D + S D
Sbjct: 24 NRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDA 83
Query: 98 RFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELV 157
RF+V AS + + DV + SL I G + F V F+ +V
Sbjct: 84 RFIVSASDDKTLKLWDVETG---SLIKTLI---------GHTNY--AFCVNFNPQSNMIV 129
Query: 158 AAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFI 217
+ D + ++D+ KC +PAH V V F + G LI S S D LC++WD
Sbjct: 130 SGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDF-NRDGSLIVSSSYDGLCRIWDSG--- 185
Query: 218 SKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI 259
+ ++ ++F+ +G++ + D T +LW+I
Sbjct: 186 TGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNI 227
Score = 147 (56.8 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 57/220 (25%), Positives = 96/220 (43%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPA-----HKSDVNTVCFADETGHL 198
+ SVKFS+DG+ L +A +D I Y + + P H++ ++ V F+ +
Sbjct: 27 VSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDA-RF 85
Query: 199 IFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWD 258
I S SDD K+WD + G L+GH ++ +S D+T ++WD
Sbjct: 86 IVSASDDKTLKLWD----VETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWD 141
Query: 259 IR-----KMSSNTTDNSRLRDYDWDYRWMEYPSYARRLKHPHDQSLATYKGHSVLRTLIR 313
+ K+ +D D++ D + SY L D GH V +TLI
Sbjct: 142 VTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDG-LCRIWDSGT----GHCV-KTLID 195
Query: 314 CYFSP----EYSTAQKYIYTGSSDNSVYIYDLVSGAQVAK 349
P +S K+I G+ DN++ +++ +S A+ K
Sbjct: 196 DENPPVSFVRFSPNGKFILVGTLDNTLRLWN-ISSAKFLK 234
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 207 (77.9 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 69/257 (26%), Positives = 117/257 (45%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETG-HLIFSG 202
+ + ++TDG L +A +D + V+D + + R+ H S VN+ C+ G L+ +G
Sbjct: 113 VMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRGPQLVCTG 171
Query: 203 SDDSLCKVWDRRCFISKGRANGVLMGHLE--GITFIDSRRDGRYFISNGKDQTTKLWDIR 260
SDD K+WD I K A + +TF D+ IS G D K+WD+R
Sbjct: 172 SDDGTVKLWD----IRKKAAVQTFQNTYQVLAVTFNDTSDQ---IISGGIDNDIKVWDLR 224
Query: 261 K------MSSNTTDNSRLR-DYDWDYRWMEYPSYARRLKH-----PHDQSLATYKG--HS 306
+ M + + L + Y R+ P ++ + ++G H+
Sbjct: 225 QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHN 284
Query: 307 VLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIY 366
+ L+RC +SP+ S I GS+D VY++D S + KL H + + +HP
Sbjct: 285 FEKNLLRCSWSPDGSK----IAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDE 340
Query: 367 PMLISSSWDCNIVRWEI 383
P+++S+S D + EI
Sbjct: 341 PIILSASSDKRLYMGEI 357
Score = 127 (49.8 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 29/124 (23%), Positives = 60/124 (48%)
Query: 139 EDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHL 198
++ + + +V F+ ++++ G DN I V+DL+ NK + + H V + + E +L
Sbjct: 192 QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYL 251
Query: 199 IFSGSDDSLCKVWDRRCFISKGRANGVLMGHL----EGITFIDSRRDGRYFISNGKDQTT 254
+ + D+++ +VWD R F K R + G++ + + DG + D+
Sbjct: 252 LSNAMDNTV-RVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFV 310
Query: 255 KLWD 258
+WD
Sbjct: 311 YVWD 314
Score = 127 (49.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 39/134 (29%), Positives = 58/134 (43%)
Query: 137 GDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCS--LRIPAHKSDVNTVCFADE 194
G E E ++ KF +G L +AG D I ++++ + C + H V + + +
Sbjct: 65 GHEGE--VYCCKFHPNGSTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMELHYNTD 121
Query: 195 TGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQ-T 253
G ++FS S D VWD G L GH + R G + G D T
Sbjct: 122 -GSMLFSASTDKTVAVWDSET----GERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGT 176
Query: 254 TKLWDIRKMSSNTT 267
KLWDIRK ++ T
Sbjct: 177 VKLWDIRKKAAVQT 190
Score = 123 (48.4 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 41/165 (24%), Positives = 79/165 (47%)
Query: 42 RVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQRFLV 101
+V F++ ++ +++IKV+++ +N K+ + A ++T SLS + +L+
Sbjct: 196 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQN-KLTYTMRGHAD--SVTGLSLSSEGSYLL 252
Query: 102 YASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGS 161
++ V + DV A + V I +G + E + +S DG ++ A +
Sbjct: 253 SNAMDNTVRVWDVRPFAPKERC-VKIFQG-----NVHNFEKNLLRCSWSPDGSKIAAGSA 306
Query: 162 DNFIYVYDLQANKCSLRIPAHKSDVNTVCF-ADETGHLIFSGSDD 205
D F+YV+D + + ++P H +N V F DE +I S S D
Sbjct: 307 DRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEP--IILSASSD 349
Score = 46 (21.3 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 8/40 (20%), Positives = 21/40 (52%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQK 77
G + V ++ DGS +AS + + V++ + ++++
Sbjct: 108 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR 147
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 206 (77.6 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 69/257 (26%), Positives = 117/257 (45%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETG-HLIFSG 202
+ + ++TDG L +A +D + V+D + + R+ H S VN+ C+ G L+ +G
Sbjct: 113 VMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRGPQLVCTG 171
Query: 203 SDDSLCKVWDRRCFISKGRANGVLMGHLE--GITFIDSRRDGRYFISNGKDQTTKLWDIR 260
SDD K+WD I K A + +TF D+ IS G D K+WD+R
Sbjct: 172 SDDGTVKLWD----IRKKAAIQTFQNTYQVLAVTFNDTSDQ---IISGGIDNDIKVWDLR 224
Query: 261 K------MSSNTTDNSRLR-DYDWDYRWMEYPSYARRLKH-----PHDQSLATYKG--HS 306
+ M + + L + Y R+ P ++ + ++G H+
Sbjct: 225 QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHN 284
Query: 307 VLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIY 366
+ L+RC +SP+ S I GS+D VY++D S + KL H + + +HP
Sbjct: 285 FEKNLLRCSWSPDGSK----IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDE 340
Query: 367 PMLISSSWDCNIVRWEI 383
P+++S+S D + EI
Sbjct: 341 PIILSASSDKRLYMGEI 357
Score = 127 (49.8 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 29/124 (23%), Positives = 60/124 (48%)
Query: 139 EDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHL 198
++ + + +V F+ ++++ G DN I V+DL+ NK + + H V + + E +L
Sbjct: 192 QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYL 251
Query: 199 IFSGSDDSLCKVWDRRCFISKGRANGVLMGHL----EGITFIDSRRDGRYFISNGKDQTT 254
+ + D+++ +VWD R F K R + G++ + + DG + D+
Sbjct: 252 LSNAMDNTV-RVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFV 310
Query: 255 KLWD 258
+WD
Sbjct: 311 YVWD 314
Score = 127 (49.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 39/134 (29%), Positives = 58/134 (43%)
Query: 137 GDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCS--LRIPAHKSDVNTVCFADE 194
G E E ++ KF +G L +AG D I ++++ + C + H V + + +
Sbjct: 65 GHEGE--VYCCKFHPNGSTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMELHYNTD 121
Query: 195 TGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQ-T 253
G ++FS S D VWD G L GH + R G + G D T
Sbjct: 122 -GSMLFSASTDKTVAVWDSET----GERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGT 176
Query: 254 TKLWDIRKMSSNTT 267
KLWDIRK ++ T
Sbjct: 177 VKLWDIRKKAAIQT 190
Score = 123 (48.4 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 41/165 (24%), Positives = 79/165 (47%)
Query: 42 RVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQRFLV 101
+V F++ ++ +++IKV+++ +N K+ + A ++T SLS + +L+
Sbjct: 196 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQN-KLTYTMRGHAD--SVTGLSLSSEGSYLL 252
Query: 102 YASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGS 161
++ V + DV A + V I +G + E + +S DG ++ A +
Sbjct: 253 SNAMDNTVRVWDVRPFAPKERC-VKIFQG-----NVHNFEKNLLRCSWSPDGSKIAAGSA 306
Query: 162 DNFIYVYDLQANKCSLRIPAHKSDVNTVCF-ADETGHLIFSGSDD 205
D F+YV+D + + ++P H +N V F DE +I S S D
Sbjct: 307 DRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEP--IILSASSD 349
Score = 46 (21.3 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 8/40 (20%), Positives = 21/40 (52%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQK 77
G + V ++ DGS +AS + + V++ + ++++
Sbjct: 108 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR 147
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 206 (77.6 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 69/257 (26%), Positives = 117/257 (45%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETG-HLIFSG 202
+ + ++TDG L +A +D + V+D + + R+ H S VN+ C+ G L+ +G
Sbjct: 113 VMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRGPQLVCTG 171
Query: 203 SDDSLCKVWDRRCFISKGRANGVLMGHLE--GITFIDSRRDGRYFISNGKDQTTKLWDIR 260
SDD K+WD I K A + +TF D+ IS G D K+WD+R
Sbjct: 172 SDDGTVKLWD----IRKKAAIQTFQNTYQVLAVTFNDTSDQ---IISGGIDNDIKVWDLR 224
Query: 261 K------MSSNTTDNSRLR-DYDWDYRWMEYPSYARRLKH-----PHDQSLATYKG--HS 306
+ M + + L + Y R+ P ++ + ++G H+
Sbjct: 225 QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHN 284
Query: 307 VLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIY 366
+ L+RC +SP+ S I GS+D VY++D S + KL H + + +HP
Sbjct: 285 FEKNLLRCSWSPDGSK----IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDE 340
Query: 367 PMLISSSWDCNIVRWEI 383
P+++S+S D + EI
Sbjct: 341 PIILSASSDKRLYMGEI 357
Score = 127 (49.8 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 29/124 (23%), Positives = 60/124 (48%)
Query: 139 EDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHL 198
++ + + +V F+ ++++ G DN I V+DL+ NK + + H V + + E +L
Sbjct: 192 QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYL 251
Query: 199 IFSGSDDSLCKVWDRRCFISKGRANGVLMGHL----EGITFIDSRRDGRYFISNGKDQTT 254
+ + D+++ +VWD R F K R + G++ + + DG + D+
Sbjct: 252 LSNAMDNTV-RVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFV 310
Query: 255 KLWD 258
+WD
Sbjct: 311 YVWD 314
Score = 127 (49.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 39/134 (29%), Positives = 58/134 (43%)
Query: 137 GDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCS--LRIPAHKSDVNTVCFADE 194
G E E ++ KF +G L +AG D I ++++ + C + H V + + +
Sbjct: 65 GHEGE--VYCCKFHPNGSTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMELHYNTD 121
Query: 195 TGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQ-T 253
G ++FS S D VWD G L GH + R G + G D T
Sbjct: 122 -GSMLFSASTDKTVAVWDSET----GERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGT 176
Query: 254 TKLWDIRKMSSNTT 267
KLWDIRK ++ T
Sbjct: 177 VKLWDIRKKAAIQT 190
Score = 123 (48.4 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 41/165 (24%), Positives = 79/165 (47%)
Query: 42 RVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQRFLV 101
+V F++ ++ +++IKV+++ +N K+ + A ++T SLS + +L+
Sbjct: 196 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQN-KLTYTMRGHAD--SVTGLSLSSEGSYLL 252
Query: 102 YASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGS 161
++ V + DV A + V I +G + E + +S DG ++ A +
Sbjct: 253 SNAMDNTVRVWDVRPFAPKERC-VRIFQG-----NVHNFEKNLLRCSWSPDGSKIAAGSA 306
Query: 162 DNFIYVYDLQANKCSLRIPAHKSDVNTVCF-ADETGHLIFSGSDD 205
D F+YV+D + + ++P H +N V F DE +I S S D
Sbjct: 307 DRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEP--IILSASSD 349
Score = 46 (21.3 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 8/40 (20%), Positives = 21/40 (52%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQK 77
G + V ++ DGS +AS + + V++ + ++++
Sbjct: 108 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR 147
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 206 (77.6 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 69/257 (26%), Positives = 117/257 (45%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETG-HLIFSG 202
+ + ++TDG L +A +D + V+D + + R+ H S VN+ C+ G L+ +G
Sbjct: 113 VMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRGPQLVCTG 171
Query: 203 SDDSLCKVWDRRCFISKGRANGVLMGHLE--GITFIDSRRDGRYFISNGKDQTTKLWDIR 260
SDD K+WD I K A + +TF D+ IS G D K+WD+R
Sbjct: 172 SDDGTVKLWD----IRKKAAIQTFQNTYQVLAVTFNDTSDQ---IISGGIDNDIKVWDLR 224
Query: 261 K------MSSNTTDNSRLR-DYDWDYRWMEYPSYARRLKH-----PHDQSLATYKG--HS 306
+ M + + L + Y R+ P ++ + ++G H+
Sbjct: 225 QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHN 284
Query: 307 VLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIY 366
+ L+RC +SP+ S I GS+D VY++D S + KL H + + +HP
Sbjct: 285 FEKNLLRCSWSPDGSK----IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDE 340
Query: 367 PMLISSSWDCNIVRWEI 383
P+++S+S D + EI
Sbjct: 341 PIILSASSDKRLYMGEI 357
Score = 127 (49.8 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 29/124 (23%), Positives = 60/124 (48%)
Query: 139 EDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHL 198
++ + + +V F+ ++++ G DN I V+DL+ NK + + H V + + E +L
Sbjct: 192 QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYL 251
Query: 199 IFSGSDDSLCKVWDRRCFISKGRANGVLMGHL----EGITFIDSRRDGRYFISNGKDQTT 254
+ + D+++ +VWD R F K R + G++ + + DG + D+
Sbjct: 252 LSNAMDNTV-RVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFV 310
Query: 255 KLWD 258
+WD
Sbjct: 311 YVWD 314
Score = 127 (49.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 39/134 (29%), Positives = 58/134 (43%)
Query: 137 GDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCS--LRIPAHKSDVNTVCFADE 194
G E E ++ KF +G L +AG D I ++++ + C + H V + + +
Sbjct: 65 GHEGE--VYCCKFHPNGSTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMELHYNTD 121
Query: 195 TGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQ-T 253
G ++FS S D VWD G L GH + R G + G D T
Sbjct: 122 -GSMLFSASTDKTVAVWDSET----GERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGT 176
Query: 254 TKLWDIRKMSSNTT 267
KLWDIRK ++ T
Sbjct: 177 VKLWDIRKKAAIQT 190
Score = 123 (48.4 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 41/165 (24%), Positives = 79/165 (47%)
Query: 42 RVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQRFLV 101
+V F++ ++ +++IKV+++ +N K+ + A ++T SLS + +L+
Sbjct: 196 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQN-KLTYTMRGHAD--SVTGLSLSSEGSYLL 252
Query: 102 YASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGS 161
++ V + DV A + V I +G + E + +S DG ++ A +
Sbjct: 253 SNAMDNTVRVWDVRPFAPKERC-VKIFQG-----NVHNFEKNLLRCSWSPDGSKIAAGSA 306
Query: 162 DNFIYVYDLQANKCSLRIPAHKSDVNTVCF-ADETGHLIFSGSDD 205
D F+YV+D + + ++P H +N V F DE +I S S D
Sbjct: 307 DRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEP--IILSASSD 349
Score = 46 (21.3 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 8/40 (20%), Positives = 21/40 (52%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQK 77
G + V ++ DGS +AS + + V++ + ++++
Sbjct: 108 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR 147
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 204 (76.9 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 60/239 (25%), Positives = 108/239 (45%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
I V +S+D LV+A D + V+D+++ KC + H SD C + +LI SGS
Sbjct: 84 ISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGH-SDFVFCCDFNPPSNLIVSGS 142
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWD----- 258
D K+W+ + G+ L H + I+ ++ +G +S D ++WD
Sbjct: 143 FDESVKIWE----VKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQ 198
Query: 259 -IRKMSSNTTDNSRLRDYDWDYRWMEYPSYARRLK---HPHDQSLATYKGHSVLRTLIRC 314
+R ++ + + +++ + LK + + L TY GH + C
Sbjct: 199 CLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKY---C 255
Query: 315 YFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSS 373
F+ T +K++ +GS DN VYI++L + V +L H V HP ++ S++
Sbjct: 256 LFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIASAA 314
Score = 153 (58.9 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 32/117 (27%), Positives = 58/117 (49%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
I SVKFS +G+ L ++ +D I ++ C + H +++ V ++ ++ L+ S S
Sbjct: 42 ISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSSRLV-SAS 100
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
DD KVWD R G+ L GH + + D +S D++ K+W+++
Sbjct: 101 DDKTLKVWDMR----SGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVK 153
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 206 (77.6 bits), Expect = 3.9e-14, P = 3.9e-14
Identities = 70/257 (27%), Positives = 117/257 (45%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETG-HLIFSG 202
+ + ++TDG L +A +D + V+D + + R+ H S VN+ C+ G L+ +G
Sbjct: 139 VMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRGPQLVCTG 197
Query: 203 SDDSLCKVWDRRCFISKGRANGVLMGHLE--GITFIDSRRDGRYFISNGKDQTTKLWDIR 260
SDD K+WD I K A + +TF D+ IS G D K+WD+R
Sbjct: 198 SDDGTVKLWD----IRKKAAVQTFQNTYQVLAVTFNDTSDQ---IISGGIDNDIKVWDLR 250
Query: 261 K------MSSNTTDNSRLR-DYDWDYRWMEYPSYARRLKH-----PHDQSLATYKG--HS 306
+ M + + L + Y R+ P ++ + ++G H+
Sbjct: 251 QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHN 310
Query: 307 VLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIY 366
+ L+RC +SP+ S I GS+D VY++D S + KL H V + +HP
Sbjct: 311 FEKNLLRCSWSPDGSK----IAGGSADRFVYVWDTTSRRILYKLPGHAGSVNELAFHPEE 366
Query: 367 PMLISSSWDCNIVRWEI 383
P+++S+S D + EI
Sbjct: 367 PIILSASSDKRLYMGEI 383
Score = 125 (49.1 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 28/124 (22%), Positives = 59/124 (47%)
Query: 139 EDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHL 198
++ + + +V F+ ++++ G DN I V+DL+ NK + + H V + + E +L
Sbjct: 218 QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYL 277
Query: 199 IFSGSDDSLCKVWDRRCFISKGRANGVLMGHL----EGITFIDSRRDGRYFISNGKDQTT 254
+ + D+++ ++WD R F K R + G++ + + DG D+
Sbjct: 278 LSNAMDNTV-RIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFV 336
Query: 255 KLWD 258
+WD
Sbjct: 337 YVWD 340
Score = 122 (48.0 bits), Expect = 0.00013, P = 0.00013
Identities = 39/134 (29%), Positives = 57/134 (42%)
Query: 137 GDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCS--LRIPAHKSDVNTVCFADE 194
G E E ++ KF G L +AG D I ++++ + C + H V + + +
Sbjct: 91 GHEGE--VYCCKFHPWGNTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMELHYNTD 147
Query: 195 TGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQ-T 253
G ++FS S D VWD G L GH + R G + G D T
Sbjct: 148 -GSMLFSASTDKTVAVWDSET----GERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGT 202
Query: 254 TKLWDIRKMSSNTT 267
KLWDIRK ++ T
Sbjct: 203 VKLWDIRKKAAVQT 216
Score = 120 (47.3 bits), Expect = 0.00022, P = 0.00022
Identities = 39/166 (23%), Positives = 78/166 (46%)
Query: 42 RVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQRFLV 101
+V F++ ++ +++IKV+++ +N K+ + A ++T SLS + +L+
Sbjct: 222 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQN-KLTYTMRGHAD--SVTGLSLSSEGSYLL 278
Query: 102 YASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGS 161
++ V I DV A + V I +G + E + +S DG ++ +
Sbjct: 279 SNAMDNTVRIWDVRPFAPKERC-VKIFQG-----NVHNFEKNLLRCSWSPDGSKIAGGSA 332
Query: 162 DNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSL 207
D F+YV+D + + ++P H VN + F E ++ + SD L
Sbjct: 333 DRFVYVWDTTSRRILYKLPGHAGSVNELAFHPEEPIILSASSDKRL 378
Score = 46 (21.3 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 8/40 (20%), Positives = 21/40 (52%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQK 77
G + V ++ DGS +AS + + V++ + ++++
Sbjct: 134 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR 173
>DICTYBASE|DDB_G0278353 [details] [associations]
symbol:smu1 "suppressor of mec-8 and unc-52-like
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
dictyBase:DDB_G0278353 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 HSSP:P26449
PROSITE:PS50897 KO:K13111 OMA:NGHWDTV RefSeq:XP_642306.2
ProteinModelPortal:Q54Y96 EnsemblProtists:DDB0233537 GeneID:8621512
KEGG:ddi:DDB_G0278353 ProtClustDB:CLSZ2430773 Uniprot:Q54Y96
Length = 530
Score = 209 (78.6 bits), Expect = 4.3e-14, P = 4.3e-14
Identities = 84/348 (24%), Positives = 144/348 (41%)
Query: 48 FSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQRFLVYASICA 107
F + F S+E I +DK K + + +++ SPD ++L+ S+
Sbjct: 196 FKGEVPFKKIESEEEQITTV-LDKTIKFNNKNKPETIKF-------SPDSKYLLTGSMDG 247
Query: 108 IVNIVDVGSSA-RESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGS-DNFI 165
+ + D + +SLA DF D I + FS DG E +A GS DN I
Sbjct: 248 FIEVWDYNTGKLSKSLA---YQSNDDFMMHDD----AILCIAFSKDG-EFLATGSLDNKI 299
Query: 166 YVYDLQANKCSLRI-PAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANG 224
V+ +++ KC + PAH + V + F+ + ++ SGS DS K+ + G+A
Sbjct: 300 KVWQIKSGKCLRKFEPAHTNGVTCLQFSRNSTQIL-SGSFDSSLKIHG----LKSGKALK 354
Query: 225 VLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMS--SNTTDNSRLRDYDWDYR-- 280
+ GH + D IS D K+WD + T S + D R
Sbjct: 355 IFRGHQSFVNDCCFNHDEDRVISCSSDGKIKIWDAKSSDCLQTITPTSVVTVRDISIRSI 414
Query: 281 --WMEYPSYARRLKHPHDQSLATYKGHSVLRTLI----RCYFSPEYSTAQKYIYTGSSDN 334
++ P + + + S+ + K ++ +T + + S Q Y+Y DN
Sbjct: 415 TILLKNPEFLL-VCNSSQISIVSMKSQTISKTFTSENSKTFLVCTLSPLQNYLYAVDEDN 473
Query: 335 SVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWE 382
+Y +D SG+ + K H+ V HP +L ++ DC + W+
Sbjct: 474 ILYTFDFNSGSLLNKFKIHDQEVISISHHPTKNLLATTGSDCLLKIWK 521
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 202 (76.2 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 74/255 (29%), Positives = 115/255 (45%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
I VKF+ D LV+AG+D + V+D++ C +H VN+V +I S S
Sbjct: 82 IMEVKFNADSSHLVSAGTDKTVRVWDMETGSCIRNFKSHTDIVNSVDVNRRGPQMICSAS 141
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGHLE-GITFIDSRRDGRYFISNGKDQTTKLWD---- 258
DD V D R SK A + + + +TF D+ + I G D K+WD
Sbjct: 142 DDGTVMVHDMR---SKEAAKKFICKYQQTAVTFNDAADN---VICGGIDNQIKVWDMLRN 195
Query: 259 -IRKMSSNTTDN--SRLRDYDWDY---RWMEYP--SYARRLKHPHDQSLATYKG--HSVL 308
+R + S D S ++ ++ M+ S+ R P + +A Y+G H+
Sbjct: 196 DVRYVLSGHRDTITSLSVSHNGNFLLSNSMDCSLMSWDIRPFVPAQRLVARYQGASHNFE 255
Query: 309 RTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPM 368
+ L++C +SP YI GS+D VY+++ S A V KL H V HP +
Sbjct: 256 KNLLKCGWSPR----DNYITAGSADRFVYVWNAKSRACVYKLPGHLGSVNCTALHPTQQI 311
Query: 369 LISSSWDCNIVRWEI 383
L+S+ D I E+
Sbjct: 312 LLSAGSDKTIFLGEL 326
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 202 (76.2 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 67/253 (26%), Positives = 112/253 (44%)
Query: 141 EFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIF 200
+ GI V +S+D LV+A D + ++D+ + KC + H + V C + +LI
Sbjct: 87 KLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV-FCCNFNPQSNLIV 145
Query: 201 SGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
SGS D ++WD + G+ L H + ++ + RDG +S+ D ++WD
Sbjct: 146 SGSFDESVRIWD----VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 201
Query: 261 KMSSNTT----DNSRLR--DYDWDYRWMEYPSYARRLK---HPHDQSLATYKGHSVLRTL 311
T DN + + + +++ + LK + + L TY H +
Sbjct: 202 SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYC 261
Query: 312 IRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLIS 371
I FS T K+I +GS DN VYI++L + V KL H V HP ++ S
Sbjct: 262 IFANFSV---TGGKWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTENIIAS 318
Query: 372 SSW--DCNIVRWE 382
++ D I W+
Sbjct: 319 AALENDKTIKLWK 331
Score = 149 (57.5 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 31/117 (26%), Positives = 59/117 (50%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
+ SVKFS +G+ L ++ +D I ++ K I HK ++ V ++ ++ +L+ S S
Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS-NLLVSAS 106
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
DD K+WD +S G+ L GH + + +S D++ ++WD++
Sbjct: 107 DDKTLKIWD----VSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
Score = 121 (47.7 bits), Expect = 0.00013, P = 0.00013
Identities = 50/224 (22%), Positives = 94/224 (41%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQ 97
G ++ V+ F+ + V+ S + ++++++V K K K + + ++ + D
Sbjct: 127 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV-KTGKCLKTLPAHSD--PVSAVHFNRDG 183
Query: 98 RFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELV 157
+V +S + I D S + L + D+D + VKFS +G+ ++
Sbjct: 184 SLIVSSSYDGLCRIWDTASG--QCLKTLI-----------DDDNPPVSFVKFSPNGKYIL 230
Query: 158 AAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVC--FADETGHLIFSGSDDSLCKVWDRRC 215
AA DN + ++D KC HK++ + F+ G I SGS+D+L +W+
Sbjct: 231 AATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN--- 287
Query: 216 FISKGRANGVLMGHLEGITFIDSRRDGRYFISNG--KDQTTKLW 257
+ L GH + + S D+T KLW
Sbjct: 288 -LQTKEVVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 118 (46.6 bits), Expect = 0.00028, P = 0.00028
Identities = 44/167 (26%), Positives = 74/167 (44%)
Query: 226 LMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSSNTTDNSR---LRDYDW--DYR 280
L GH + ++ + +G + S+ D+ K+W T + + D W D
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 281 WMEYPSYARRLKH---PHDQSLATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVY 337
+ S + LK + L T KGHS + C F+P+ I +GS D SV
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHS--NYVFCCNFNPQ----SNLIVSGSFDESVR 154
Query: 338 IYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWD--CNIVRWE 382
I+D+ +G + L H+ PV ++ +++SSS+D C I W+
Sbjct: 155 IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI--WD 199
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 199 (75.1 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 71/255 (27%), Positives = 114/255 (44%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETG-HLIFSG 202
+ + ++TDG L +A +D + V+D + + R+ H S VN+ CF G L +G
Sbjct: 102 VMELHYNTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNS-CFPARRGPQLACTG 160
Query: 203 SDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRK- 261
SDD K+WD R S + +TF D+ IS G D K+WD+R+
Sbjct: 161 SDDGTVKLWDIRKKASVHTFQNTYQ--VLSVTFNDTSDQ---IISGGIDNDIKVWDLRQN 215
Query: 262 -----MSSNTTDNSRLR-DYDWDYRWMEYPSYARRLKH-----PHDQSLATYKG--HSVL 308
M + + L D Y + R+ P ++ + ++G H+
Sbjct: 216 KLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFE 275
Query: 309 RTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPM 368
+ L+RC +S + S I GS+D VYI+D + V KL H V + +HP P+
Sbjct: 276 KNLLRCSWSADGSK----IAAGSADRFVYIWDTTTRRIVYKLPGHAGSVNEVAFHPEEPI 331
Query: 369 LISSSWDCNIVRWEI 383
++S S D + EI
Sbjct: 332 VLSGSSDKRLYIGEI 346
Score = 132 (51.5 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 40/164 (24%), Positives = 79/164 (48%)
Query: 42 RVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQRFLV 101
+V + F++ ++ +++IKV+++ +N K+ ++ ++T SLS D +L+
Sbjct: 185 QVLSVTFNDTSDQIISGGIDNDIKVWDLRQN-KLIYSMQGHGD--SVTGLSLSADGSYLL 241
Query: 102 YASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGS 161
S+ V + D+ A + V I +G + E + +S DG ++ A +
Sbjct: 242 SNSMDNSVRVWDIRPFAPKERC-VKIFQG-----NVHNFEKNLLRCSWSADGSKIAAGSA 295
Query: 162 DNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDD 205
D F+Y++D + ++P H VN V F E ++ SGS D
Sbjct: 296 DRFVYIWDTTTRRIVYKLPGHAGSVNEVAFHPEEP-IVLSGSSD 338
Score = 127 (49.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 30/124 (24%), Positives = 59/124 (47%)
Query: 139 EDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHL 198
++ + + SV F+ ++++ G DN I V+DL+ NK + H V + + + +L
Sbjct: 181 QNTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYL 240
Query: 199 IFSGSDDSLCKVWDRRCFISKGRANGVLMGHL----EGITFIDSRRDGRYFISNGKDQTT 254
+ + D+S+ +VWD R F K R + G++ + + DG + D+
Sbjct: 241 LSNSMDNSV-RVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFV 299
Query: 255 KLWD 258
+WD
Sbjct: 300 YIWD 303
Score = 44 (20.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 8/40 (20%), Positives = 21/40 (52%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQK 77
G + V ++ DGS +AS + + V++ + ++++
Sbjct: 97 GHSGAVMELHYNTDGSLLFSASTDKTVCVWDSETGERVKR 136
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 199 (75.1 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 69/253 (27%), Positives = 111/253 (43%)
Query: 141 EFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIF 200
+ GI V +S+D + LV+ D + V++L K + H + V C + +LI
Sbjct: 114 KLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYV-FCCNFNPQSNLIV 172
Query: 201 SGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
SGS D ++WD R G+ L H + ++ + RDG +S+ D ++WD
Sbjct: 173 SGSFDESVRIWDVRT----GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 228
Query: 261 KMSSNTT----DNSRLR--DYDWDYRWMEYPSYARRLK---HPHDQSLATYKGHSVLRTL 311
T DN + + + +++ + LK + + L TY GH +
Sbjct: 229 SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYC 288
Query: 312 IRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLIS 371
I FS T K+I +GS DN VYI++L S V KL H V HP ++ S
Sbjct: 289 IFANFSV---TGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIAS 345
Query: 372 SSW--DCNIVRWE 382
++ D I W+
Sbjct: 346 AALENDKTIKLWK 358
Score = 155 (59.6 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 38/145 (26%), Positives = 72/145 (49%)
Query: 116 SSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKC 175
S++ +S +V + L F+ G + +VKFS +G+ L ++ +D I ++ K
Sbjct: 49 SASNKSSLSVKPNYTLKFTLAGHTK--AVSAVKFSPNGEWLASSSADKLIKIWGAYDGKF 106
Query: 176 SLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITF 235
I HK ++ V ++ ++ L+ SGSDD KVW+ +S G++ L GH +
Sbjct: 107 EKTISGHKLGISDVAWSSDS-RLLVSGSDDKTLKVWE----LSTGKSLKTLKGHSNYVFC 161
Query: 236 IDSRRDGRYFISNGKDQTTKLWDIR 260
+ +S D++ ++WD+R
Sbjct: 162 CNFNPQSNLIVSGSFDESVRIWDVR 186
Score = 119 (46.9 bits), Expect = 0.00025, P = 0.00025
Identities = 50/224 (22%), Positives = 96/224 (42%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQ 97
G ++ V+ F+ + V+ S + ++++++V + K K + + ++ + D
Sbjct: 154 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV-RTGKCLKTLPAHSD--PVSAVHFNRDG 210
Query: 98 RFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELV 157
+V +S + I D S + L + D+D + VKFS +G+ ++
Sbjct: 211 SLIVSSSYDGLCRIWDTASG--QCLKTLI-----------DDDNPPVSFVKFSPNGKYIL 257
Query: 158 AAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVC--FADETGHLIFSGSDDSLCKVWDRRC 215
AA DN + ++D KC HK++ + F+ G I SGS+D++ +W+ +
Sbjct: 258 AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQ- 316
Query: 216 FISKGRANGVLMGHLEGITFIDSRRDGRYFISNG--KDQTTKLW 257
SK L GH + + S D+T KLW
Sbjct: 317 --SKEVVQK-LQGHTDTVLCTACHPTENIIASAALENDKTIKLW 357
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 197 (74.4 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 69/255 (27%), Positives = 112/255 (43%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
+ F+ DG + +D + +D+ + R H + VN+V + L+ SGS
Sbjct: 101 VMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGS 160
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMS 263
DD K+WD R K A L + +T + G IS G D K+WDIRK +
Sbjct: 161 DDRTIKIWDAR----KKHAAHTLESPFQ-VTAVCFGDTGEQVISGGIDNEVKIWDIRKQA 215
Query: 264 --------SNTTDNSRLRDYDWDYRWMEYPSYARRLKH-----PHDQSLATYKGH--SVL 308
S+T L + D+ R+ P ++ + ++GH +
Sbjct: 216 VLHHLRGHSDTITGMSLSP-EGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFE 274
Query: 309 RTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPM 368
+ L+RC +SP + K I +GS+D VYI+D+ + + KL HN V + P P+
Sbjct: 275 KNLLRCAWSPG---SDK-ITSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKEPL 330
Query: 369 LISSSWDCNIVRWEI 383
++S S D + EI
Sbjct: 331 ILSGSSDKTLYLGEI 345
Score = 137 (53.3 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 37/129 (28%), Positives = 62/129 (48%)
Query: 136 DGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCS--LRIPAHKSDVNTVCFAD 193
+G E E IF+ +F +G+ L+++G D IY++ + + C + + H V F
Sbjct: 52 EGHEGE--IFTAEFHPEGELLLSSGFDRQIYIWQVYED-CENVMAMSGHSGAVMEAHFTP 108
Query: 194 ETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKD-Q 252
+ H IF+ S D WD I+ G+ GH + + R G+ + +G D +
Sbjct: 109 DGSH-IFTCSTDKTLAFWD----IATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDR 163
Query: 253 TTKLWDIRK 261
T K+WD RK
Sbjct: 164 TIKIWDARK 172
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 199 (75.1 bits), Expect = 7.0e-13, P = 7.0e-13
Identities = 76/265 (28%), Positives = 118/265 (44%)
Query: 7 VNYSGRGRFSAADSCHVLSRYLPVNGPWKVDGM------NSRVYTSQ--FSNDGSFFVAA 58
VN+S G++ A C+ ++ V+ KV + +Y FS DG++
Sbjct: 287 VNFSNDGKYLAT-GCNRSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPDGNYLATG 345
Query: 59 SQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQRFLVYASICAIVNIVDV--GS 116
+++ +KV+++ KIQ L I S D RF+V S I D+ G
Sbjct: 346 AEDKTVKVWDIHTK-KIQHTFYGHEL--DIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGK 402
Query: 117 SARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGS-DNFIYVYDLQANKC 175
A +L N + G ++ G+ SV S DG+ LVAAGS DN + ++D Q
Sbjct: 403 CAF-TLGNEEV---------GPKN--GVTSVAMSPDGR-LVAAGSLDNIVRLWDAQTGYF 449
Query: 176 SLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITF 235
R H V +V F+ + G + SGS D K+WD S+ R GH + +
Sbjct: 450 LERYEGHLDSVYSVAFSPD-GKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLS 508
Query: 236 IDSRRDGRYFISNGKDQTTKLWDIR 260
+ DG + IS KD++ + WD R
Sbjct: 509 VAFSPDGSWLISGSKDRSVQFWDPR 533
Score = 173 (66.0 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 57/226 (25%), Positives = 100/226 (44%)
Query: 40 NSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQK--DIETKALRWTITDTSLSPDQ 97
NS V FSNDG + S ++Y+VD K+ D K I SPD
Sbjct: 281 NSVVCCVNFSNDGKYLATGCNRS-AQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPDG 339
Query: 98 RFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELV 157
+L + V + D+ + K + + G E I+S+ +S+DG+ +V
Sbjct: 340 NYLATGAEDKTVKVWDIHT------------KKIQHTFYGHE--LDIYSLDYSSDGRFIV 385
Query: 158 AAGSDNFIYVYDLQANKCSLRIPAH----KSDVNTVCFADETGHLIFSGSDDSLCKVWDR 213
+ D ++D++ KC+ + K+ V +V + + G L+ +GS D++ ++WD
Sbjct: 386 SGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPD-GRLVAAGSLDNIVRLWDA 444
Query: 214 RCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI 259
+ R G HL+ + + DG+ S D++ KLWD+
Sbjct: 445 QTGYFLERYEG----HLDSVYSVAFSPDGKSLASGSLDKSLKLWDL 486
Score = 167 (63.8 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 66/248 (26%), Positives = 102/248 (41%)
Query: 127 IHKGLDFSA-DGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSD 185
+H +D S DGD I SV FS DG L D + V+D+ K H+ D
Sbjct: 315 VHAFVDESEKDGD---LYIRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELD 371
Query: 186 VNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVL----MGHLEGITFIDSRRD 241
+ ++ ++ + G I SGS D K+WD I KG+ L +G G+T + D
Sbjct: 372 IYSLDYSSD-GRFIVSGSGDKKAKIWD----IEKGKCAFTLGNEEVGPKNGVTSVAMSPD 426
Query: 242 GRYFISNGKDQTTKLWDIR-----KMSSNTTDNSRLRDYDWDYRWMEYPSYARRLK---- 292
GR + D +LWD + + D+ + D + + S + LK
Sbjct: 427 GRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDL 486
Query: 293 ---HPHDQSLATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAK 349
+ AT+ GH ++ FSP+ S ++ +GS D SV +D +G
Sbjct: 487 SGSRSRSRCRATFNGHKDF--VLSVAFSPDGS----WLISGSKDRSVQFWDPRNGTTHMM 540
Query: 350 LDFHNAPV 357
L H V
Sbjct: 541 LQGHKNSV 548
Score = 163 (62.4 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 70/258 (27%), Positives = 114/258 (44%)
Query: 147 VKFSTDGQELVAAGSDNFIYVYDLQANK-CSLRIPAHKSD----VNTVCFADETGHLIFS 201
V FS DG+ L A G + +YD+ K + + D + +VCF+ + G+ + +
Sbjct: 287 VNFSNDGKYL-ATGCNRSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPD-GNYLAT 344
Query: 202 GSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRK 261
G++D KVWD I + GH I +D DGR+ +S D+ K+WDI K
Sbjct: 345 GAEDKTVKVWD----IHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEK 400
Query: 262 -MSSNTTDNSRLRDYDW--------DYRWMEYPSYARRLKHPHDQS---LATYKGHSVLR 309
+ T N + + D R + S ++ Q+ L Y+GH L
Sbjct: 401 GKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGH--LD 458
Query: 310 TLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQV-----AKLDFHNAPVRDCCWHP 364
++ FSP+ K + +GS D S+ ++DL SG++ A + H V + P
Sbjct: 459 SVYSVAFSPD----GKSLASGSLDKSLKLWDL-SGSRSRSRCRATFNGHKDFVLSVAFSP 513
Query: 365 IYPMLISSSWDCNIVRWE 382
LIS S D ++ W+
Sbjct: 514 DGSWLISGSKDRSVQFWD 531
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 150 (57.9 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 48/171 (28%), Positives = 77/171 (45%)
Query: 88 ITDTSLSPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSV 147
I + SPD ++L +I I+NI D+ + +H + +G I S+
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGK-------LLH-----TLEGHA--MPIRSL 196
Query: 148 KFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSL 207
FS D Q LV A D +I +YD+Q + + H S V +V F+ + H + S SD S+
Sbjct: 197 TFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSI 256
Query: 208 CKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWD 258
KVWD S+ N H + + + G +S G D+ ++D
Sbjct: 257 -KVWDTS---SRSCVN-TFFDHQDQVWSVKYNPTGSKIVSAGDDRAIHIYD 302
Score = 148 (57.2 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 36/159 (22%), Positives = 73/159 (45%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
I S+ +S DG+ L + D I ++D+ K + H + ++ F+ ++ L+ + S
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDS-QLLVTAS 209
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMS 263
DD K++D + G L GH + + D +F+S+ D++ K+WD S
Sbjct: 210 DDGYIKIYD----VQHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRS 265
Query: 264 SNTTDNSRLRDYDWDYRWMEYPSYARRLKHPHDQSLATY 302
T +D W ++ P+ ++ + D+++ Y
Sbjct: 266 CVNTFFDH-QDQVWSVKYN--PTGSKIVSAGDDRAIHIY 301
Score = 138 (53.6 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 53/212 (25%), Positives = 98/212 (46%)
Query: 181 AHKSDVNTVCF--ADETG-HLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFID 237
AH+ + T + +++ G I +GS D L KVW + K L GH G+ ++
Sbjct: 14 AHEDAIWTAAWGRSEKDGSETIVTGSLDDLVKVW--KWSDEKLELQWTLEGHQLGVVSVN 71
Query: 238 SRRDGRYFISNGKDQTTKLWD------IRKMSSNTTDNSRLRDYDWDYRWMEYPSYARRL 291
++G S+ D +LWD I+ M + D + + D +++ S+ ++
Sbjct: 72 ISQNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVA-FSPDSKYIATGSHLGKV 130
Query: 292 KHPHDQSLATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLD 351
+S K HS L T + S YS KY+ +G+ D + I+D+ +G + L+
Sbjct: 131 NIFGVES--GKKEHS-LDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLE 187
Query: 352 FHNAPVRDCCWHPIYPMLISSSWDCNIVRWEI 383
H P+R + P +L+++S D I +++
Sbjct: 188 GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 219
Score = 84 (34.6 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 21/88 (23%), Positives = 47/88 (53%)
Query: 34 WKVDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKAL-RWTITDTS 92
W ++G V + S +G+ ++S +++I++++++ +I K ++ + WT+ +
Sbjct: 58 WTLEGHQLGVVSVNISQNGAIAASSSLDAHIRLWDLETGKQI-KSMDAGPVDAWTV---A 113
Query: 93 LSPDQRFLVYASICAIVNIVDVGSSARE 120
SPD +++ S VNI V S +E
Sbjct: 114 FSPDSKYIATGSHLGKVNIFGVESGKKE 141
Score = 74 (31.1 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 25/85 (29%), Positives = 40/85 (47%)
Query: 299 LATYKGHSV-LRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPV 357
L T +GH++ +R+L FSP+ + + T S D + IYD+ L H + V
Sbjct: 183 LHTLEGHAMPIRSLT---FSPD----SQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWV 235
Query: 358 RDCCWHPIYPMLISSSWDCNIVRWE 382
+ P +SSS D +I W+
Sbjct: 236 LSVAFSPDDTHFVSSSSDKSIKVWD 260
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 188 (71.2 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 64/243 (26%), Positives = 109/243 (44%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETG-HLIFSG 202
+ + ++TDG L +A +D + V+D + + R+ H S VN+ C+ G L+ +G
Sbjct: 112 VMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRGPQLVCTG 170
Query: 203 SDDSLCKVWDRRCFISKGRANGVLMGHLE--GITFIDSRRDGRYFISNGKDQTTKLWDIR 260
SDD K+WD I K A + +TF D+ IS G D K+WD+R
Sbjct: 171 SDDGTVKLWD----IRKKAAIQTFQNTYQVLAVTFNDTSDQ---IISGGIDNDIKVWDLR 223
Query: 261 K------MSSNTTDNSRLR-DYDWDYRWMEYPSYARRLKH-----PHDQSLATYKG--HS 306
+ M + + L + Y R+ P ++ + ++G H+
Sbjct: 224 QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHN 283
Query: 307 VLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIY 366
+ L+RC +SP+ S I GS+D VY++D S + KL H + + +HP
Sbjct: 284 FEKNLLRCSWSPDGSK----IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDE 339
Query: 367 PML 369
P++
Sbjct: 340 PII 342
Score = 127 (49.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 29/124 (23%), Positives = 60/124 (48%)
Query: 139 EDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHL 198
++ + + +V F+ ++++ G DN I V+DL+ NK + + H V + + E +L
Sbjct: 191 QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYL 250
Query: 199 IFSGSDDSLCKVWDRRCFISKGRANGVLMGHL----EGITFIDSRRDGRYFISNGKDQTT 254
+ + D+++ +VWD R F K R + G++ + + DG + D+
Sbjct: 251 LSNAMDNTV-RVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFV 309
Query: 255 KLWD 258
+WD
Sbjct: 310 YVWD 313
Score = 127 (49.8 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 39/134 (29%), Positives = 58/134 (43%)
Query: 137 GDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCS--LRIPAHKSDVNTVCFADE 194
G E E ++ KF +G L +AG D I ++++ + C + H V + + +
Sbjct: 64 GHEGE--VYCCKFHPNGSTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMELHYNTD 120
Query: 195 TGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQ-T 253
G ++FS S D VWD G L GH + R G + G D T
Sbjct: 121 -GSMLFSASTDKTVAVWDSET----GERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGT 175
Query: 254 TKLWDIRKMSSNTT 267
KLWDIRK ++ T
Sbjct: 176 VKLWDIRKKAAIQT 189
Score = 118 (46.6 bits), Expect = 0.00041, P = 0.00041
Identities = 43/172 (25%), Positives = 81/172 (47%)
Query: 42 RVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQRFLV 101
+V F++ ++ +++IKV+++ +N K+ + A ++T SLS + +L+
Sbjct: 195 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQN-KLTYTMRGHAD--SVTGLSLSSEGSYLL 251
Query: 102 YASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGS 161
++ V + DV A + V I +G + E + +S DG ++ A +
Sbjct: 252 SNAMDNTVRVWDVRPFAPKERC-VKIFQG-----NVHNFEKNLLRCSWSPDGSKIAAGSA 305
Query: 162 DNFIYVYDLQANKCSLRIPAHKSDVNTVCF-ADE----TG-HLIFSGSDDSL 207
D F+YV+D + + ++P H +N V F DE TG H I G + L
Sbjct: 306 DRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIETGFHRIGQGGHELL 357
Score = 46 (21.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 8/40 (20%), Positives = 21/40 (52%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQK 77
G + V ++ DGS +AS + + V++ + ++++
Sbjct: 107 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR 146
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 176 (67.0 bits), Expect = 6.6e-12, Sum P(2) = 6.6e-12
Identities = 48/182 (26%), Positives = 80/182 (43%)
Query: 87 TITDTSLSPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFS 146
T+T +LSPD + L A + + D+ E+L + KG E +
Sbjct: 62 TLTALALSPDDKLLFSAGHSRQIRVWDL-----ETLKCIRSWKG---------HEGPVMG 107
Query: 147 VKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCF-ADETGHLIFSGSDD 205
+ G L AG+D + V+D+ C+ HK V+++ F D +++ SGSDD
Sbjct: 108 MACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDD 167
Query: 206 SLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSSN 265
+ +VWD ++ + ++ H +T I DG S G+D+ LWD+ S
Sbjct: 168 ATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHDYSCK 227
Query: 266 TT 267
T
Sbjct: 228 AT 229
Score = 142 (55.0 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 56/230 (24%), Positives = 105/230 (45%)
Query: 144 IFSVKFSTDGQELVAAGSD-NFIYVYDLQANKCSLRIPAHKSDVNTV--CFADETGHLIF 200
I +KF D ++ +A ++ + VYD+ CS + HK V ++ C + LI
Sbjct: 361 IADMKFLGDEEQFLAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIV 420
Query: 201 SGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFID-SRRDGRYFISNGKDQTTKLWDI 259
+GS D ++W+ SK GV GH I + +++ +F+S D+T K+W +
Sbjct: 421 TGSKDKTVRLWNAT---SKS-CIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSL 476
Query: 260 RKMSSNTTD--NSRLRD----YDWDYRWMEYPSYARRL-KHPHDQSLATYK----GHSV- 307
+S ++ + N + R +D D + + D++ + ++ H V
Sbjct: 477 DGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVT 536
Query: 308 LRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPV 357
L+ R FS E+ST + + T S D +V I+ + G+ + + H + V
Sbjct: 537 LKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSV 586
Score = 63 (27.2 bits), Expect = 6.6e-12, Sum P(2) = 6.6e-12
Identities = 17/69 (24%), Positives = 30/69 (43%)
Query: 321 STAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCW-HPIYPMLISSSWDCNIV 379
S+ I TGS D +V +++ S + + HN + + + +S S D +
Sbjct: 413 SSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLK 472
Query: 380 RWEIPGIGE 388
W + GI E
Sbjct: 473 VWSLDGISE 481
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 169 (64.5 bits), Expect = 8.3e-12, Sum P(2) = 8.3e-12
Identities = 59/254 (23%), Positives = 108/254 (42%)
Query: 141 EFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIF 200
+ G+ +S D + +V A D + +Y++ K + + H + V C + L+
Sbjct: 121 KLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYV-FCCNFNPQSSLVV 179
Query: 201 SGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWD-- 258
SGS D ++WD R G L H + ++ + RDG S D ++WD
Sbjct: 180 SGSFDESVRIWDVRT----GMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTA 235
Query: 259 ----IRKMSSNTTDNSRLRDYDWDYRWMEYPSYARRLK---HPHDQSLATYKGHSVLRTL 311
++ + + + + +++ + LK ++L Y+GH +
Sbjct: 236 NGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYC 295
Query: 312 IRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPV--RDCCWHPIYPML 369
I FS T K+I +GS D +Y+++L + V L+ H V DC HP+ M+
Sbjct: 296 IFANFSV---TGGKWIISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIASDC--HPMQNMI 350
Query: 370 ISSSWDC-NIVR-W 381
S + + N +R W
Sbjct: 351 ASGALEPDNTIRIW 364
Score = 130 (50.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 45/164 (27%), Positives = 80/164 (48%)
Query: 228 GHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMS-SNTTDNSRL--RDYDW--DYRWM 282
GH + I+ + G++ ++ D+T K+W++ +S T +L D+ W D + +
Sbjct: 77 GHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADSKSI 136
Query: 283 EYPSYARRLKH---PHDQSLATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIY 339
S + LK P + T KGH+ + C F+P+ S + +GS D SV I+
Sbjct: 137 VTASDDKTLKIYEVPTVKMAKTLKGHT--NYVFCCNFNPQSSL----VVSGSFDESVRIW 190
Query: 340 DLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVR-WE 382
D+ +G V L H+ PV ++ ++ S S+D +VR W+
Sbjct: 191 DVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYD-GLVRIWD 233
Score = 126 (49.4 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 56/253 (22%), Positives = 106/253 (41%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
I +VKFS G+ L + +D + ++++ C + HK VN ++ ++ ++ + S
Sbjct: 82 ISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADSKSIV-TAS 140
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRK-M 262
DD K+++ + + L GH + + +S D++ ++WD+R M
Sbjct: 141 DDKTLKIYE----VPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGM 196
Query: 263 SSNT----TDNSRLRDYDWDYRWMEYPSYARRLKHPHDQSLATYKGHSVLRTLIRCYFSP 318
T +D ++ D + SY L D T G V +TL+ P
Sbjct: 197 CVKTLPAHSDPVSAVSFNRDGSLITSGSYDG-LVRIWD----TANGQCV-KTLVDDENPP 250
Query: 319 ----EYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIY----PMLI 370
++S KYI + + DN++ ++D G + + H + C + +I
Sbjct: 251 VAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENN-KYCIFANFSVTGGKWII 309
Query: 371 SSSWDCNIVRWEI 383
S S DC I W +
Sbjct: 310 SGSEDCKIYVWNL 322
Score = 57 (25.1 bits), Expect = 8.3e-12, Sum P(2) = 8.3e-12
Identities = 17/79 (21%), Positives = 37/79 (46%)
Query: 36 VDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSP 95
++G + +FS G F +S + +K++N+ + ++ + L + D + S
Sbjct: 75 IEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMS-DLSCERTLTGHKLG--VNDFAWSA 131
Query: 96 DQRFLVYASICAIVNIVDV 114
D + +V AS + I +V
Sbjct: 132 DSKSIVTASDDKTLKIYEV 150
>UNIPROTKB|E2RBV0 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001162 "positive regulation of histone
H3-K79 methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
KO:K12602 OMA:IATGSHH EMBL:AAEX03002395 EMBL:AAEX03002396
RefSeq:XP_536215.2 ProteinModelPortal:E2RBV0
Ensembl:ENSCAFT00000022589 GeneID:479068 KEGG:cfa:479068
NextBio:20854309 Uniprot:E2RBV0
Length = 305
Score = 147 (56.8 bits), Expect = 8.5e-12, Sum P(2) = 8.5e-12
Identities = 32/128 (25%), Positives = 63/128 (49%)
Query: 132 DFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCF 191
++S D +F I S+ +S DG+ L + D I ++D+ K + H + ++ F
Sbjct: 141 EYSLD-TRGKF-ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTF 198
Query: 192 ADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKD 251
+ ++ L+ + SDD K++D + G L GH + + D +F+S+ D
Sbjct: 199 SPDS-QLLVTASDDGYIKIYD----VQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSD 253
Query: 252 QTTKLWDI 259
++ K+WD+
Sbjct: 254 KSVKVWDV 261
Score = 144 (55.7 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 47/171 (27%), Positives = 74/171 (43%)
Query: 88 ITDTSLSPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSV 147
I + SPD ++L +I I+NI D+ + +H + +G I S+
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGK-------LLH-----TLEGHA--MPIRSL 196
Query: 148 KFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSL 207
FS D Q LV A D +I +YD+Q + + H S V V F + H + S SD S+
Sbjct: 197 TFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSV 256
Query: 208 CKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWD 258
KVWD + H + + + +G +S G DQ ++D
Sbjct: 257 -KVWD----VGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
Score = 116 (45.9 bits), Expect = 0.00039, P = 0.00039
Identities = 45/193 (23%), Positives = 80/193 (41%)
Query: 194 ETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQT 253
E + +GS D L KVW + C + L GH G+ +D S+ D
Sbjct: 30 ENSETVVTGSLDDLVKVW-KWCD-ERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAH 87
Query: 254 TKLWDIRKMSSNTTDNSRLRDYDWDYRWMEYPSYARRLKHPHDQSL---ATYKGHSVLRT 310
+LWD+ + ++ D W + Y H ++ + K L T
Sbjct: 88 IRLWDLDNGKQIKSIDAGPVDA-WTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDT 146
Query: 311 LIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLI 370
+ S YS KY+ +G+ D + I+D+ +G + L+ H P+R + P +L+
Sbjct: 147 RGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLV 206
Query: 371 SSSWDCNIVRWEI 383
++S D I +++
Sbjct: 207 TASDDGYIKIYDV 219
Score = 78 (32.5 bits), Expect = 8.5e-12, Sum P(2) = 8.5e-12
Identities = 23/88 (26%), Positives = 45/88 (51%)
Query: 34 WKVDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKAL-RWTITDTS 92
W ++G V + S+ ++S +++I+++++D N K K I+ + WT+ +
Sbjct: 58 WSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLD-NGKQIKSIDAGPVDAWTL---A 113
Query: 93 LSPDQRFLVYASICAIVNIVDVGSSARE 120
SPD ++L + VNI V S +E
Sbjct: 114 FSPDSQYLATGTHVGKVNIFGVESGKKE 141
>DICTYBASE|DDB_G0289711 [details] [associations]
symbol:morg1 "mitogen-activated protein kinase
organizer 1" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0289711 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000148 HSSP:P16649 KO:K13124
RefSeq:XP_636074.1 ProteinModelPortal:Q54H44
EnsemblProtists:DDB0233741 GeneID:8627284 KEGG:ddi:DDB_G0289711
OMA:CKQGAVR Uniprot:Q54H44
Length = 325
Score = 116 (45.9 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 33/122 (27%), Positives = 59/122 (48%)
Query: 139 EDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTV--CFADETG 196
ED I SV + D + +A+ +D + + D+ + + HK+ V + C ++
Sbjct: 206 EDTIPISSVSITKDKKCFIASCTDETVKLIDIDSYETLKEYKGHKNKVYKINSC-SNFDD 264
Query: 197 HLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKL 256
LI SGS+D+ +++ + G+ L GH IT +DS FI++ D T ++
Sbjct: 265 SLIISGSEDNDFYIYE----LLSGKLLSKLSGHSNIITHVDSHPSKNQFITSSTDCTIRI 320
Query: 257 WD 258
WD
Sbjct: 321 WD 322
Score = 114 (45.2 bits), Expect = 1.6e-11, Sum P(3) = 1.6e-11
Identities = 28/86 (32%), Positives = 43/86 (50%)
Query: 297 QSLATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAP 356
++L YKGH + + + + I +GS DN YIY+L+SG ++KL H+
Sbjct: 241 ETLKEYKGHK--NKVYKINSCSNFDDS--LIISGSEDNDFYIYELLSGKLLSKLSGHSNI 296
Query: 357 VRDCCWHPIYPMLISSSWDCNIVRWE 382
+ HP I+SS DC I W+
Sbjct: 297 ITHVDSHPSKNQFITSSTDCTIRIWD 322
Score = 104 (41.7 bits), Expect = 1.6e-11, Sum P(3) = 1.6e-11
Identities = 31/102 (30%), Positives = 52/102 (50%)
Query: 115 GSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANK 174
GSS + S+ + KG +E +GI + ++D ++L + ++ +Y +D+ + +
Sbjct: 32 GSSDK-SIKLYNVSKG-SMIHSFEEHGYGIGDLVSTSDNKQLFSC-AEKQLYQWDIASGQ 88
Query: 175 CSLRIP-AHKSDVNTVCF-ADETGHLIFSGSDDSLCKVWDRR 214
R AH + +VC D T L+FSGS D L K WD R
Sbjct: 89 VIRRFQNAHNDTITSVCVNLDST--LLFSGSSDRLVKAWDLR 128
Score = 69 (29.3 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 223 NGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMS 263
N VL H +T + DG Y +S D++ KL+++ K S
Sbjct: 7 NKVLSNHSGSVTVVKYNSDGGYCLSGSSDKSIKLYNVSKGS 47
Score = 60 (26.2 bits), Expect = 4.3e-07, Sum P(3) = 4.3e-07
Identities = 9/25 (36%), Positives = 19/25 (76%)
Query: 47 QFSNDGSFFVAASQESNIKVYNVDK 71
++++DG + ++ S + +IK+YNV K
Sbjct: 21 KYNSDGGYCLSGSSDKSIKLYNVSK 45
Score = 46 (21.3 bits), Expect = 1.6e-11, Sum P(3) = 1.6e-11
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 233 ITFIDSRRDGRYFISNGKDQTTKLWDI 259
I+ + +D + FI++ D+T KL DI
Sbjct: 211 ISSVSITKDKKCFIASCTDETVKLIDI 237
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 183 (69.5 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 61/246 (24%), Positives = 116/246 (47%)
Query: 143 GIFSVKFSTDGQELVAAGSDNFIYVYDL-QANKCSLRIPAHKSDVNTVCFADETGHLIFS 201
GI ++F DG ++ + +D+ + +++L QA +C +R +H + VN V ++ + G+L+ S
Sbjct: 20 GITQLRFGPDGAQIATSSTDSTVILWNLNQAARC-IRFASHSAPVNGVAWSPK-GNLVAS 77
Query: 202 GSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRK 261
D K+W+ + +G +G + H + + +D G ++ D++ K+W + +
Sbjct: 78 AGHDRTVKIWEPKL---RG-VSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWRVAR 133
Query: 262 ---MSSNTTDNSRLRDYDWDYRWMEYPSYARRLKHPHDQSLATYKGHS--VLRTLIRCYF 316
+SS N+ +R + P+ D+S+ Y S +RT
Sbjct: 134 RQFVSSFAQQNNWVRSAKFS------PNGKLVATASDDKSVRIYDVDSGECVRTFTEERA 187
Query: 317 SPEYSTAQKY---IYTGSSDNSVYIYDLVSGAQVAKLDF-HNAPVRDCCWHPIYPMLISS 372
+P + + N + I+D VSG+Q+ +L H+APV D +HP L+S
Sbjct: 188 APRQLAWHPWGNMLAVALGCNRIKIFD-VSGSQLLQLYVVHSAPVNDVAFHPSGHFLLSG 246
Query: 373 SWDCNI 378
S D I
Sbjct: 247 SDDRTI 252
Score = 127 (49.8 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 31/105 (29%), Positives = 49/105 (46%)
Query: 153 GQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWD 212
G L A N I ++D+ ++ H + VN V F +GH + SGSDD ++ D
Sbjct: 198 GNMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPVNDVAF-HPSGHFLLSGSDDRTIRILD 256
Query: 213 RRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
+ +GR L GH + + + RDG F + G D+ +W
Sbjct: 257 ----LLEGRPIYTLTGHTDAVNAVAFSRDGDKFATGGSDRQLLVW 297
Score = 127 (49.8 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 54/222 (24%), Positives = 93/222 (41%)
Query: 147 VKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDS 206
V +S G + +AG D + +++ + S AH V +V F D TGHL+ + SDD
Sbjct: 66 VAWSPKGNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDF-DSTGHLMLTASDDK 124
Query: 207 LCKVWD--RRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRK--- 261
K+W RR F+S + F + G+ + D++ +++D+
Sbjct: 125 SAKIWRVARRQFVSSFAQQN---NWVRSAKFSPN---GKLVATASDDKSVRIYDVDSGEC 178
Query: 262 MSSNTTDNSRLRDYDWDYRWMEYPSYA---RRLKH---PHDQSLATYKGHSVLRTLIRCY 315
+ + T + + R W + W + A R+K Q L Y HS +
Sbjct: 179 VRTFTEERAAPRQLAW-HPWGNMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPVNDVA-- 235
Query: 316 FSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPV 357
F P + ++ +GS D ++ I DL+ G + L H V
Sbjct: 236 FHP----SGHFLLSGSDDRTIRILDLLEGRPIYTLTGHTDAV 273
Score = 38 (18.4 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 7/34 (20%), Positives = 19/34 (55%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDK 71
G + + +F DG+ +S +S + ++N+++
Sbjct: 16 GHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQ 49
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 149 (57.5 bits), Expect = 9.8e-09, Sum P(2) = 9.8e-09
Identities = 48/174 (27%), Positives = 76/174 (43%)
Query: 84 LRWTITDTSLSPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFG 143
+ W + SPD R +V AS V + D ++RE + + H G
Sbjct: 176 INW-VRCAKFSPDGRLIVSASDDKTVKLWD--KTSRECVHSYCEHGGF------------ 220
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
+ V F G + AAG DN + V+D++ ++ H + VN + F +G+ + + S
Sbjct: 221 VTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSF-HPSGNYLVTAS 279
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
DS K+ D + +GR L GH T + R G YF S G D+ +W
Sbjct: 280 SDSTLKILD----LMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 329
Score = 146 (56.5 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 55/240 (22%), Positives = 101/240 (42%)
Query: 147 VKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDS 206
V FS + ++L + D+ + V+ ++ + R HK V V F+ +GHL+ SGS D
Sbjct: 56 VDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSP-SGHLLASGSRDK 114
Query: 207 LCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMS--- 263
++W KG + V H + + DG+ F++ D+T K+W +
Sbjct: 115 TVRIWVPNI---KGEST-VFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLF 170
Query: 264 --SNTTDNSRLRDYDWDYRWMEYPSYARRLK---HPHDQSLATYKGHSVLRTLIRCYFSP 318
S + R + D R + S + +K + + +Y H T + F P
Sbjct: 171 SLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD--FHP 228
Query: 319 EYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNI 378
T + DN+V ++D+ + + H+A V +HP L+++S D +
Sbjct: 229 S-GTC---VAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTL 284
Score = 144 (55.7 bits), Expect = 6.1e-11, Sum P(3) = 6.1e-11
Identities = 39/118 (33%), Positives = 52/118 (44%)
Query: 146 SVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDD 205
SV F +DGQ V A D I V+ K + H + V F+ + G LI S SDD
Sbjct: 139 SVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPD-GRLIVSASDD 197
Query: 206 SLCKVWD---RRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
K+WD R C S G +T++D G + G D T K+WD+R
Sbjct: 198 KTVKLWDKTSRECVHSYCEHGGF-------VTYVDFHPSGTCVAAAGMDNTVKVWDVR 248
Score = 62 (26.9 bits), Expect = 6.1e-11, Sum P(3) = 6.1e-11
Identities = 15/57 (26%), Positives = 25/57 (43%)
Query: 326 YIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWE 382
Y+ T SSD+++ I DL+ G + L H P + S D ++ W+
Sbjct: 274 YLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 330
Score = 50 (22.7 bits), Expect = 6.1e-11, Sum P(3) = 6.1e-11
Identities = 10/49 (20%), Positives = 22/49 (44%)
Query: 19 DSCHVLSRYLPVNGPWKVDGMNSRVYTSQFSNDGSFFVAASQESNIKVY 67
DSC ++ P + ++ G V FS G + S++ ++++
Sbjct: 71 DSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIW 119
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 148 (57.2 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 59/218 (27%), Positives = 92/218 (42%)
Query: 86 WTITDTSLSPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIF 145
W + SPD R +V S + I D ++ ++ + N + DF F F
Sbjct: 146 W-VRCAKFSPDGRLIVSCSEDKTIKIWD--TTNKQCVNNFS-----DFVG------FANF 191
Query: 146 SVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDD 205
V F+ +G + +AGSD+ + ++D++ NK H VN V F +LI + SD
Sbjct: 192 -VAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDG 250
Query: 206 SLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSSN 265
+L K+ D + +GR L GH + + + G F S G D LW N
Sbjct: 251 TL-KILD----LLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVLLWRTNFDELN 305
Query: 266 TTDNSR--LRDYDWDYRWMEYPSYARRLKHPHDQSLAT 301
D S+ L+ +D Y R HPH+ + T
Sbjct: 306 YKDVSKRNLKRLHFDSPPHLLDIYPRT-PHPHEGRIDT 342
Score = 130 (50.8 bits), Expect = 6.2e-11, Sum P(3) = 6.2e-11
Identities = 38/116 (32%), Positives = 52/116 (44%)
Query: 146 SVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDD 205
SV FS DGQ L +A D I V+++ + + H V F+ + G LI S S+D
Sbjct: 107 SVDFSADGQFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPD-GRLIVSCSED 165
Query: 206 SLCKVWDRRCFISKGRANGVLMGHLEGIT-FIDSRRDGRYFISNGKDQTTKLWDIR 260
K+WD +K N G F+ +G S G D T K+WDIR
Sbjct: 166 KTIKIWDTT---NKQCVNN--FSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIR 216
Score = 129 (50.5 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 33/118 (27%), Positives = 61/118 (51%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
I SV FS +G++L D F+ ++ L+ + R HK + +V F+ G+L+ S S
Sbjct: 21 ITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFSP-LGNLLASAS 79
Query: 204 DDSLCKVW--DRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI 259
D ++W D+R S+ +A H + +D DG++ S +D++ K+W++
Sbjct: 80 RDRTIRLWIPDKRGKSSEFKA------HTAPVRSVDFSADGQFLASASEDKSIKVWNM 131
Score = 70 (29.7 bits), Expect = 6.2e-11, Sum P(3) = 6.2e-11
Identities = 16/56 (28%), Positives = 25/56 (44%)
Query: 326 YIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRW 381
Y+ T SSD ++ I DL+ G + L H PV + + S D ++ W
Sbjct: 242 YLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVLLW 297
Score = 64 (27.6 bits), Expect = 6.2e-11, Sum P(3) = 6.2e-11
Identities = 27/101 (26%), Positives = 45/101 (44%)
Query: 7 VNYSGRGRFSAA---DSCHVLSRYLPVNGPWKVDGMNSRVYTSQFSNDGSFFVAASQESN 63
V++S G+ A D+ +L P ++ G + + QFS G+ +AS++
Sbjct: 24 VDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFSPLGNLLASASRDRT 83
Query: 64 IKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQRFLVYAS 104
I+++ DK K E KA + S D +FL AS
Sbjct: 84 IRLWIPDKRGKSS---EFKAHTAPVRSVDFSADGQFLASAS 121
Score = 52 (23.4 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 23/102 (22%), Positives = 43/102 (42%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQ 97
G + + + FS +G S ++ + ++++ + + + K + IT SP
Sbjct: 16 GHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDV---ITSVQFSPLG 72
Query: 98 RFLVYASICAIVN--IVDVGSSARESLANVTIHKGLDFSADG 137
L AS + I D + E A+ + +DFSADG
Sbjct: 73 NLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADG 114
Score = 51 (23.0 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 327 IYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWD 375
I + SD++V I+D+ + H+ V +HP LI++S D
Sbjct: 201 IASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSD 249
>DICTYBASE|DDB_G0271788 [details] [associations]
symbol:wdr57 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA;ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0271788
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0000398 KO:K12857 OMA:HAGSVNE HSSP:P61964 RefSeq:XP_645454.1
ProteinModelPortal:Q55AR8 STRING:Q55AR8 EnsemblProtists:DDB0233518
GeneID:8618082 KEGG:ddi:DDB_G0271788 Uniprot:Q55AR8
Length = 355
Score = 176 (67.0 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 72/255 (28%), Positives = 109/255 (42%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
I + +STD E+ A +D I V+D + RI H VN+ C A L+ SGS
Sbjct: 108 ILELHWSTDSNEIYTACTDKSIGVWDSNKGELIKRIREHSGVVNSCCPARRGPPLVASGS 167
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKM- 262
DD +++D R SKG + L H +T + I+ G D ++WDIR
Sbjct: 168 DDRSARIFDTR---SKGSTH--LFQHKYPVTSVCFSDASDQLITGGIDNVIRVWDIRNQE 222
Query: 263 -------SSNTTDNSRLRDYDWDY---RWMEYPS--YARRLKHPHDQSLATYKG--HSVL 308
S T S D Y M+ + R P ++++ T+ G ++
Sbjct: 223 DPLYTLASHQDTITSTSVSKDGAYLLSNSMDNSCKIWDIRPYAPPNRNIKTFNGAQNNFE 282
Query: 309 RTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPM 368
+ LI+ +S + I GSSD VYI+D + L H+ V + +HP P+
Sbjct: 283 KNLIKS----SWSIDGRRIGCGSSDRQVYIWDTNTKQLQYCLPGHSGTVNEVTFHPNEPI 338
Query: 369 LISSSWDCNIVRWEI 383
+ S S D I EI
Sbjct: 339 IASCSSDKTIYLGEI 353
Score = 120 (47.3 bits), Expect = 0.00019, P = 0.00019
Identities = 41/152 (26%), Positives = 62/152 (40%)
Query: 111 IVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDL 170
+V GS R + T KG S + ++ + SV FS +L+ G DN I V+D+
Sbjct: 162 LVASGSDDRSARIFDTRSKG---STHLFQHKYPVTSVCFSDASDQLITGGIDNVIRVWDI 218
Query: 171 QANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRA----NGVL 226
+ + L A D T + G + S S D+ CK+WD R + R NG
Sbjct: 219 RNQEDPLYTLASHQDTITSTSVSKDGAYLLSNSMDNSCKIWDIRPYAPPNRNIKTFNGAQ 278
Query: 227 MGHLEGITFIDSRRDGRYFISNGKDQTTKLWD 258
+ + DGR D+ +WD
Sbjct: 279 NNFEKNLIKSSWSIDGRRIGCGSSDRQVYIWD 310
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 161 (61.7 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 41/137 (29%), Positives = 62/137 (45%)
Query: 131 LDFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVC 190
L + +G D + SV FS D Q L +A D+ + ++D + H+ V +V
Sbjct: 413 LQHTLEGHRD--WVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVI 470
Query: 191 FADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGK 250
F+ ++ L+ S SDD ++WD KG L GH +T + D R S
Sbjct: 471 FSHDS-RLLASASDDRTVRIWDTE----KGSHKHTLEGHSSLVTSVSFSHDSRLLASASN 525
Query: 251 DQTTKLWDIRKMSSNTT 267
DQT ++WDI S T
Sbjct: 526 DQTVRIWDIEARSLQHT 542
Score = 160 (61.4 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 63/251 (25%), Positives = 108/251 (43%)
Query: 141 EFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIF 200
E + SV +S D + L +A D + ++D + + H V +V F+ ++ L+
Sbjct: 296 EAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDS-RLLA 354
Query: 201 SGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
S SD ++ K+WD G L GH + + + D + S D T K+WD
Sbjct: 355 SASDSTV-KIWDT----GTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTG 409
Query: 261 KMS-SNTTDNSRLRDYDWDYRWMEYPSYARRLKHPHDQSLA----TYKGHSVLRTLI--R 313
S +T + R DW R + + ++ L D S T G S+ TL R
Sbjct: 410 TGSLQHTLEGHR----DW-VRSVIFSHDSQLLASASDDSTVKIWDTGTG-SLQHTLEGHR 463
Query: 314 CYF-SPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISS 372
+ S +S + + + S D +V I+D G+ L+ H++ V + +L S+
Sbjct: 464 DWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLLASA 523
Query: 373 SWDCNIVRWEI 383
S D + W+I
Sbjct: 524 SNDQTVRIWDI 534
Score = 159 (61.0 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 59/205 (28%), Positives = 88/205 (42%)
Query: 70 DKNWKIQKDIETKALRWTITDTS-------LSPDQRFLVYASICAIVNIVDVGSSARESL 122
D+ KI D ET +L+ T+ S S D R L AS + V I D G+ +
Sbjct: 317 DRTVKIW-DTETGSLQHTLEGHSDLVRSVIFSHDSRLLASASD-STVKIWDTGTGS---- 370
Query: 123 ANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAH 182
L + +G D + SV FS D Q L +A D+ + ++D + H
Sbjct: 371 --------LQHTLEGHRD--WVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGH 420
Query: 183 KSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDG 242
+ V +V F+ ++ L+ S SDDS K+WD G L GH + + + D
Sbjct: 421 RDWVRSVIFSHDS-QLLASASDDSTVKIWDT----GTGSLQHTLEGHRDWVRSVIFSHDS 475
Query: 243 RYFISNGKDQTTKLWDIRKMSSNTT 267
R S D+T ++WD K S T
Sbjct: 476 RLLASASDDRTVRIWDTEKGSHKHT 500
Score = 62 (26.9 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 19/83 (22%), Positives = 39/83 (46%)
Query: 36 VDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSP 95
++G + V + +S+D +AS + +K+++ + +Q +E + + S
Sbjct: 292 LEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETG-SLQHTLEGHSD--LVRSVIFSH 348
Query: 96 DQRFLVYASICAIVNIVDVGSSA 118
D R L AS + V I D G+ +
Sbjct: 349 DSRLLASASD-STVKIWDTGTGS 370
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 150 (57.9 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 60/221 (27%), Positives = 90/221 (40%)
Query: 86 WTITDTSLSPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIF 145
W + SPD R +V S + I D + + N +FS D F F
Sbjct: 146 W-VRCAKFSPDGRLIVSCSEDKTIKIWD---TTNKQCVN-------NFS---DSVGFANF 191
Query: 146 SVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDD 205
V F+ G + +AGSD + V+D++ NK H VN + F +LI + SD
Sbjct: 192 -VDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDG 250
Query: 206 SLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW----DIRK 261
+L K+ D + +GR L GH + + + G F S G D LW D
Sbjct: 251 TL-KILD----LLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNFDELH 305
Query: 262 MSSNTTDNSRLRDYDWDYRWME-YPSYARRLKHPHDQSLAT 301
T N + +D ++ YP R HPH++ + T
Sbjct: 306 CKGLTKRNLKRLHFDSPPHLLDIYP----RTPHPHEEKVET 342
Score = 138 (53.6 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 59/250 (23%), Positives = 107/250 (42%)
Query: 144 IFSVKFSTDGQELVAAGSDNFI--YVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFS 201
+ SV+FS G L +A D + ++ D + K S AH + V +V F+ + G + +
Sbjct: 63 VTSVQFSPHGNLLASASRDRTVRLWIPD-KRGKFS-EFKAHTAPVRSVDFSAD-GQFLAT 119
Query: 202 GSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI-- 259
S+D KVW + + R L H + DGR +S +D+T K+WD
Sbjct: 120 ASEDKSIKVWS----MYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTN 175
Query: 260 RKMSSNTTDNSRLRDYDWDYRWMEYPSYARRLKHPHDQSLATY--KGHSVLRTL------ 311
++ +N +D+ ++ D+ PS DQ++ + + + +L+
Sbjct: 176 KQCVNNFSDSVGFANFV-DFN----PSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGG 230
Query: 312 IRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLIS 371
+ C + + Y+ T SSD ++ I DL+ G + L H PV + + S
Sbjct: 231 VNCI---SFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFAS 287
Query: 372 SSWDCNIVRW 381
D ++ W
Sbjct: 288 GGADTQVLLW 297
Score = 125 (49.1 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 56/242 (23%), Positives = 106/242 (43%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
I S+ S +G++L A D F+ +++ + + + R HK V +V F+ G+L+ S S
Sbjct: 21 ITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPH-GNLLASAS 79
Query: 204 DDSLCKVW--DRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI-- 259
D ++W D+R S+ +A H + +D DG++ + +D++ K+W +
Sbjct: 80 RDRTVRLWIPDKRGKFSEFKA------HTAPVRSVDFSADGQFLATASEDKSIKVWSMYR 133
Query: 260 -RKMSS--NTTDNSRLRDYDWDYRWMEYPSYARRLK---HPHDQSLATYKGHSVLRTLIR 313
R + S T R + D R + S + +K + Q + + +
Sbjct: 134 QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVD 193
Query: 314 CYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSS 373
F+P T I + SD +V ++D+ + H+ V +HP LI++S
Sbjct: 194 --FNPS-GTC---IASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITAS 247
Query: 374 WD 375
D
Sbjct: 248 SD 249
Score = 71 (30.1 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 25/100 (25%), Positives = 48/100 (48%)
Query: 6 EVNYSGRGRFSAA-DSCHVLSRYLPVNGPWKVDGMNSRVYTSQFSNDGSFFVAASQESNI 64
+++ +G+ +A+ D+ +L + P ++ G V + QFS G+ +AS++ +
Sbjct: 25 DLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTV 84
Query: 65 KVYNVDKNWKIQKDIETKALRWTITDTSLSPDQRFLVYAS 104
+++ DK K E KA + S D +FL AS
Sbjct: 85 RLWIPDKRGKFS---EFKAHTAPVRSVDFSADGQFLATAS 121
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 149 (57.5 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 59/222 (26%), Positives = 92/222 (41%)
Query: 86 WTITDTSLSPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIF 145
W + SPD R +V S + I D + + N +FS D F F
Sbjct: 146 W-VRCAKFSPDGRLIVSCSEDKTIKIWD---TTNKQCVN-------NFS---DSVGFANF 191
Query: 146 SVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDD 205
V F+ G + +AGSD + V+D++ NK H VN + F +L+ + SD
Sbjct: 192 -VDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDG 250
Query: 206 SLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW-----DIR 260
+L K+ D + +GR L GH + + + G F S G D LW ++
Sbjct: 251 TL-KILD----LLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNFDELH 305
Query: 261 KMSSNTTDNSRLRDYDWDYRWME-YPSYARRLKHPHDQSLAT 301
N + RL +D ++ YP R HPH++ + T
Sbjct: 306 CKGLNKRNLKRLH-FDSPPHLLDIYP----RTPHPHEEKVET 342
Score = 140 (54.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 59/250 (23%), Positives = 107/250 (42%)
Query: 144 IFSVKFSTDGQELVAAGSDNFI--YVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFS 201
+ SV+FS G L +A D + ++ D + K S AH + V +V F+ + G + +
Sbjct: 63 VTSVQFSPHGNLLASASRDRTVRLWIPD-KRGKFS-EFKAHTAPVRSVDFSAD-GQFLAT 119
Query: 202 GSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI-- 259
S+D KVW + + R L H + DGR +S +D+T K+WD
Sbjct: 120 ASEDKSIKVWS----MYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTN 175
Query: 260 RKMSSNTTDNSRLRDYDWDYRWMEYPSYARRLKHPHDQSLATY--KGHSVLRTL------ 311
++ +N +D+ ++ D+ PS DQ++ + + + +L+
Sbjct: 176 KQCVNNFSDSVGFANFV-DFN----PSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGG 230
Query: 312 IRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLIS 371
+ C + + Y+ T SSD ++ I DL+ G + L H PV + + S
Sbjct: 231 VNCI---SFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFAS 287
Query: 372 SSWDCNIVRW 381
D ++ W
Sbjct: 288 GGADTQVLLW 297
Score = 124 (48.7 bits), Expect = 0.00010, P = 0.00010
Identities = 55/242 (22%), Positives = 106/242 (43%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
I S+ S +G++L A D F+ +++ + + + R HK V +V F+ G+L+ S S
Sbjct: 21 ITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPH-GNLLASAS 79
Query: 204 DDSLCKVW--DRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI-- 259
D ++W D+R S+ +A H + +D DG++ + +D++ K+W +
Sbjct: 80 RDRTVRLWIPDKRGKFSEFKA------HTAPVRSVDFSADGQFLATASEDKSIKVWSMYR 133
Query: 260 -RKMSS--NTTDNSRLRDYDWDYRWMEYPSYARRLK---HPHDQSLATYKGHSVLRTLIR 313
R + S T R + D R + S + +K + Q + + +
Sbjct: 134 QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVD 193
Query: 314 CYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSS 373
F+P T I + SD +V ++D+ + H+ V +HP L+++S
Sbjct: 194 --FNPS-GTC---IASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTAS 247
Query: 374 WD 375
D
Sbjct: 248 SD 249
Score = 71 (30.1 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 25/100 (25%), Positives = 48/100 (48%)
Query: 6 EVNYSGRGRFSAA-DSCHVLSRYLPVNGPWKVDGMNSRVYTSQFSNDGSFFVAASQESNI 64
+++ +G+ +A+ D+ +L + P ++ G V + QFS G+ +AS++ +
Sbjct: 25 DLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTV 84
Query: 65 KVYNVDKNWKIQKDIETKALRWTITDTSLSPDQRFLVYAS 104
+++ DK K E KA + S D +FL AS
Sbjct: 85 RLWIPDKRGKFS---EFKAHTAPVRSVDFSADGQFLATAS 121
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 173 (66.0 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 60/240 (25%), Positives = 108/240 (45%)
Query: 143 GIFSVKFSTDGQELVAAGSDNFIYVYDLQAN-KCSLRIPAHKSDVNTVCFADETGHLIFS 201
GI + +S+D +A D + ++D ++ +C + H + V V F + +LI S
Sbjct: 87 GISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNF-NPPSNLIVS 145
Query: 202 GSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRK 261
GS D ++W+ + G+ ++ H I+ + RDG +S D + K+WD ++
Sbjct: 146 GSFDETIRIWE----VKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKE 201
Query: 262 MSSNTT---DNS---RLRDYDWDYRWMEYPSYARRLK---HPHDQSLATYKGHSVLRTLI 312
+ T D S + + +++ + LK + + L Y GH+ +
Sbjct: 202 GTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHT---NKV 258
Query: 313 RCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISS 372
C S T KYI +GS DN VY++DL + + +L+ H V HP+ + SS
Sbjct: 259 FCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSS 318
Score = 129 (50.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 36/153 (23%), Positives = 64/153 (41%)
Query: 108 IVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYV 167
+ N G++ NV I+K + I VKFS DG L +A D + +
Sbjct: 12 VANANSTGNAGTSG--NVPIYKPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMIL 69
Query: 168 YDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLM 227
+ R H S ++ + ++ ++ H S SDD ++WD R S VL
Sbjct: 70 WSATNYSLIHRYEGHSSGISDLAWSSDS-HYTCSASDDCTLRIWDAR---SPYECLKVLR 125
Query: 228 GHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
GH + ++ +S D+T ++W+++
Sbjct: 126 GHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVK 158
Score = 122 (48.0 bits), Expect = 0.00010, P = 0.00010
Identities = 39/165 (23%), Positives = 78/165 (47%)
Query: 48 FSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQRFLVYASICA 107
F+ DGS V+AS + + K+++ + ++ I+ K+ ++ SP+ +F++ A++ +
Sbjct: 178 FNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSP--AVSFAKFSPNGKFILVATLDS 235
Query: 108 IVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYV 167
+ + + + + L T H F FSV T+G+ +V+ DN +Y+
Sbjct: 236 TLKLSNYATG--KFLKVYTGHTNKVFCITS------AFSV---TNGKYIVSGSEDNCVYL 284
Query: 168 YDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSD-DSLCKVW 211
+DLQA R+ H V +V + SG+ D ++W
Sbjct: 285 WDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRIW 329
>RGD|621047 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1" species:10116 "Rattus
norvegicus" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:621047 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF128241 EMBL:BC087742 IPI:IPI00203832 RefSeq:NP_068525.1
UniGene:Rn.44181 ProteinModelPortal:Q9WUC8 STRING:Q9WUC8
PRIDE:Q9WUC8 Ensembl:ENSRNOT00000009113 GeneID:60376 KEGG:rno:60376
UCSC:RGD:621047 InParanoid:Q9WUC8 NextBio:612055
Genevestigator:Q9WUC8 GermOnline:ENSRNOG00000006655 Uniprot:Q9WUC8
Length = 514
Score = 113 (44.8 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 30/90 (33%), Positives = 43/90 (47%)
Query: 298 SLATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPV 357
S+ T GH+ +RC A+ I TGS D ++ ++DLV+G L H V
Sbjct: 322 SVHTLSGHTNAVATVRC------QAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSV 375
Query: 358 RDCCWHPIYPMLISSSWDCNIVRWEIPGIG 387
R HP++ S S D NI +W+ P G
Sbjct: 376 RAVVLHPLHYTFASGSPD-NIKQWKFPDGG 404
Score = 111 (44.1 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 29/111 (26%), Positives = 49/111 (44%)
Query: 154 QELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDR 213
Q V +D I ++DL + K L + H S V V + + +L FS +D K WD
Sbjct: 217 QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYL-FSCGEDKQVKCWD- 274
Query: 214 RCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSS 264
+ + GHL + +D ++ +D T ++WD+R +S
Sbjct: 275 ---LEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKAS 322
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 150 (57.9 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 60/221 (27%), Positives = 90/221 (40%)
Query: 86 WTITDTSLSPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIF 145
W + SPD R +V S + I D + + N +FS D F F
Sbjct: 104 W-VRCAKFSPDGRLIVSCSEDKTIKIWD---TTNKQCVN-------NFS---DSVGFANF 149
Query: 146 SVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDD 205
V F+ G + +AGSD + V+D++ NK H VN + F +LI + SD
Sbjct: 150 -VDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDG 208
Query: 206 SLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW----DIRK 261
+L K+ D + +GR L GH + + + G F S G D LW D
Sbjct: 209 TL-KILD----LLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNFDELH 263
Query: 262 MSSNTTDNSRLRDYDWDYRWME-YPSYARRLKHPHDQSLAT 301
T N + +D ++ YP R HPH++ + T
Sbjct: 264 CKGLTKRNLKRLHFDSPPHLLDIYP----RTPHPHEEKVET 300
Score = 138 (53.6 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 59/250 (23%), Positives = 107/250 (42%)
Query: 144 IFSVKFSTDGQELVAAGSDNFI--YVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFS 201
+ SV+FS G L +A D + ++ D + K S AH + V +V F+ + G + +
Sbjct: 21 VTSVQFSPHGNLLASASRDRTVRLWIPD-KRGKFS-EFKAHTAPVRSVDFSAD-GQFLAT 77
Query: 202 GSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI-- 259
S+D KVW + + R L H + DGR +S +D+T K+WD
Sbjct: 78 ASEDKSIKVWS----MYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTN 133
Query: 260 RKMSSNTTDNSRLRDYDWDYRWMEYPSYARRLKHPHDQSLATY--KGHSVLRTL------ 311
++ +N +D+ ++ D+ PS DQ++ + + + +L+
Sbjct: 134 KQCVNNFSDSVGFANFV-DFN----PSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGG 188
Query: 312 IRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLIS 371
+ C + + Y+ T SSD ++ I DL+ G + L H PV + + S
Sbjct: 189 VNCI---SFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFAS 245
Query: 372 SSWDCNIVRW 381
D ++ W
Sbjct: 246 GGADTQVLLW 255
Score = 68 (29.0 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 22/82 (26%), Positives = 37/82 (45%)
Query: 23 VLSRYLPVNGPWKVDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETK 82
+L + P ++ G V + QFS G+ +AS++ ++++ DK K E K
Sbjct: 1 MLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFS---EFK 57
Query: 83 ALRWTITDTSLSPDQRFLVYAS 104
A + S D +FL AS
Sbjct: 58 AHTAPVRSVDFSADGQFLATAS 79
>SGD|S000000680 [details] [associations]
symbol:TUP1 "General repressor of transcription" species:4932
"Saccharomyces cerevisiae" [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=IMP;IDA;IPI]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0001198 "negative regulation of mating-type specific
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000433 "negative regulation of transcription from RNA
polymerase II promoter by glucose" evidence=IMP] [GO:2000531
"regulation of fatty acid biosynthetic process by regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0036033 "mediator
complex binding" evidence=IDA;IPI] [GO:0042826 "histone deacetylase
binding" evidence=IDA;IPI] [GO:0043486 "histone exchange"
evidence=IMP] [GO:0061418 "regulation of transcription from RNA
polymerase II promoter in response to hypoxia" evidence=IMP]
[GO:0061392 "regulation of transcription from RNA polymerase II
promoter in response to osmotic stress" evidence=IMP] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA;IPI] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA;IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0035955 "negative regulation of dipeptide transport by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IMP] [GO:0016584 "nucleosome positioning"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000680 GO:GO:0017053 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GO:GO:2001020 GO:GO:0043486 GO:GO:0042393 GO:GO:0042826
GO:GO:0061418 GO:GO:0016584 GO:GO:0043130 GO:GO:0080025
GO:GO:0001191 GO:GO:0035955 GO:GO:0000433 GO:GO:0007070
GO:GO:2000531 GO:GO:0061392 GeneTree:ENSGT00700000104507
GO:GO:0001198 GO:GO:0036033 HOGENOM:HOG000200558 KO:K06666
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:M31733 EMBL:M35861 EMBL:X16365 PIR:JN0133 RefSeq:NP_010007.1
PDB:1ERJ PDB:3VP8 PDB:3VP9 PDBsum:1ERJ PDBsum:3VP8 PDBsum:3VP9
ProteinModelPortal:P16649 SMR:P16649 DIP:DIP-512N IntAct:P16649
MINT:MINT-648551 STRING:P16649 PaxDb:P16649 PeptideAtlas:P16649
EnsemblFungi:YCR084C GeneID:850445 KEGG:sce:YCR084C CYGD:YCR084c
OMA:TISESCI EvolutionaryTrace:P16649 NextBio:966057
Genevestigator:P16649 GermOnline:YCR084C Uniprot:P16649
Length = 713
Score = 166 (63.5 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 55/218 (25%), Positives = 101/218 (46%)
Query: 47 QFSNDGSFFVAASQESNIKVYNVDKNW---KIQKDIETKALRWTITD--TSLSPDQRFLV 101
+FSNDG + ++ +VY V ++ D R +IT+ T+ S D +
Sbjct: 351 KFSNDGEYLATGCNKTT-QVYRVSDGSLVARLSDDSAANNHRNSITENNTTTSTDNNTMT 409
Query: 102 YASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGS 161
+ I +SA E +V + L+ S+ D + I SV FS DG+ L
Sbjct: 410 TTTTTTITTTAM--TSAAELAKDV---ENLNTSSSPSSDLY-IRSVCFSPDGKFLATGAE 463
Query: 162 DNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGR 221
D I ++D++ K + + H+ D+ ++ + +G + SGS D ++WD R G+
Sbjct: 464 DRLIRIWDIENRKIVMILQGHEQDIYSLDYFP-SGDKLVSGSGDRTVRIWDLRT----GQ 518
Query: 222 ANGVLMGHLEGITFID-SRRDGRYFISNGKDQTTKLWD 258
+ + + +G+T + S DG+Y + D+ ++WD
Sbjct: 519 CS-LTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWD 555
Score = 158 (60.7 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 47/185 (25%), Positives = 90/185 (48%)
Query: 90 DTSLSPDQRFLVYASICAIVNIVDVGSSARESLANV-TI-HKGLDFSADGDEDEFGIFSV 147
+TS SP + S+C + + + A + L + I ++ + G E + I+S+
Sbjct: 435 NTSSSPSSDLYI-RSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQD--IYSL 491
Query: 148 KFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSL 207
+ G +LV+ D + ++DL+ +CSL + + V TV + G I +GS D
Sbjct: 492 DYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSI-EDGVTTVAVSPGDGKYIAAGSLDRA 550
Query: 208 CKVWDRRC-FISK--GRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSS 264
+VWD F+ + N GH + + + RDG+ +S D++ KLW+++ ++
Sbjct: 551 VRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQN-AN 609
Query: 265 NTTDN 269
N +D+
Sbjct: 610 NKSDS 614
Score = 57 (25.1 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 18/64 (28%), Positives = 28/64 (43%)
Query: 325 KYIYTGSSDNSVYIYDLVSGAQVAKLDFH-NAPVRDCCWH-----PIYPMLISSSWDCNI 378
+YI +GS D V +D SG + L H N+ + + P Y + + S DC
Sbjct: 643 EYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSPLGPEYNVFATGSGDCKA 702
Query: 379 VRWE 382
W+
Sbjct: 703 RIWK 706
>MGI|MGI:1858197 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1, PRL1 homolog
(Arabidopsis)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1858197 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB EMBL:AF044334 EMBL:AK075993 EMBL:AK076007
EMBL:AK077197 EMBL:BC006750 EMBL:BC052895 IPI:IPI00331172
RefSeq:NP_058064.2 UniGene:Mm.286349 ProteinModelPortal:Q922V4
SMR:Q922V4 STRING:Q922V4 PhosphoSite:Q922V4 PaxDb:Q922V4
PRIDE:Q922V4 Ensembl:ENSMUST00000150268 GeneID:53317 KEGG:mmu:53317
UCSC:uc008ppi.1 InParanoid:Q922V4 NextBio:310109 Bgee:Q922V4
Genevestigator:Q922V4 GermOnline:ENSMUSG00000027998 Uniprot:Q922V4
Length = 513
Score = 111 (44.1 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 29/111 (26%), Positives = 49/111 (44%)
Query: 154 QELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDR 213
Q V +D I ++DL + K L + H S V V + + +L FS +D K WD
Sbjct: 216 QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYL-FSCGEDKQVKCWD- 273
Query: 214 RCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSS 264
+ + GHL + +D ++ +D T ++WD+R +S
Sbjct: 274 ---LEYNKVIRHYHGHLSAVYGLDLHPTLDVLVTCSRDSTARIWDVRTKAS 321
Score = 110 (43.8 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 30/90 (33%), Positives = 42/90 (46%)
Query: 298 SLATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPV 357
S+ T GH+ +RC A+ I TGS D ++ ++DLV+G L H V
Sbjct: 321 SVHTLSGHTNAVATVRC------QAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSV 374
Query: 358 RDCCWHPIYPMLISSSWDCNIVRWEIPGIG 387
R HP+ S S D NI +W+ P G
Sbjct: 375 RAVVLHPLLYTFASGSPD-NIKQWKFPDGG 403
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 153 (58.9 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 65/256 (25%), Positives = 103/256 (40%)
Query: 86 WTITDTSLSPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIF 145
W + SPD R +V S + I D + + N +FS D F F
Sbjct: 146 W-VRCAKFSPDGRLIVSCSEDKTIKIWD---TTNKQCVN-------NFS---DSVGFANF 191
Query: 146 SVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDD 205
V F+ +G + +AGSD+ + ++D++ NK H VN V F +G+ I + S D
Sbjct: 192 -VDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSF-HPSGNYIITASSD 249
Query: 206 SLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSSN 265
K+ D + +GR L GH + + + G F S G D LW N
Sbjct: 250 GTLKILD----LLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGGADTQVLLWRTNFDYLN 305
Query: 266 TTD----NSRLRDYDWDYRWME-YPSYARRLKHPHDQSLATYKGHSVLRTLIRCYFSPEY 320
D N + +D ++ YP R HPH+ + T + + L + SP
Sbjct: 306 CKDMIKRNLKRLHFDSSPHLVDIYP----RTPHPHEGKIETVEINPKLEVIDLQTASPPV 361
Query: 321 STAQKYIYTGSSDNSV 336
+ T ++D +V
Sbjct: 362 VDILSFDSTTTTDTTV 377
Score = 140 (54.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 58/246 (23%), Positives = 104/246 (42%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
+ SV+FS G L +A D + ++ S AH + V +V F+ + G + + S
Sbjct: 63 VTSVQFSPLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSAD-GQFLATAS 121
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI--RK 261
+D KVW+ + + R L H + DGR +S +D+T K+WD ++
Sbjct: 122 EDKSIKVWN----MYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQ 177
Query: 262 MSSNTTDN---SRLRDYDWDYRWMEYPSYARRLKHPH---DQSLATYKGHSVLRTLIRCY 315
+N +D+ + D++ + + +K ++ L Y+ HS + C
Sbjct: 178 CVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHS---GGVNCV 234
Query: 316 FSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWD 375
+ + YI T SSD ++ I DL+ G + L H PV + + S D
Sbjct: 235 ---SFHPSGNYIITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGGAD 291
Query: 376 CNIVRW 381
++ W
Sbjct: 292 TQVLLW 297
Score = 131 (51.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 58/242 (23%), Positives = 107/242 (44%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
I SV FS G++L A D F+ +++ + + R HK V +V F+ G+L+ S S
Sbjct: 21 ITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSP-LGNLLASAS 79
Query: 204 DDSLCKVW--DRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI-- 259
D ++W D+R S+ +A H + +D DG++ + +D++ K+W++
Sbjct: 80 RDRTVRLWIPDKRGKSSEFKA------HTAPVRSVDFSADGQFLATASEDKSIKVWNMYR 133
Query: 260 -RKMSS--NTTDNSRLRDYDWDYRWMEYPSYARRLK---HPHDQSLATYKGHSVLRTLIR 313
R + S T R + D R + S + +K + Q + + +
Sbjct: 134 QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVD 193
Query: 314 CYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSS 373
F+P T I + SD++V I+D+ + H+ V +HP +I++S
Sbjct: 194 --FNPN-GTC---IASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITAS 247
Query: 374 WD 375
D
Sbjct: 248 SD 249
Score = 63 (27.2 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 26/96 (27%), Positives = 44/96 (45%)
Query: 10 SGRGRFSAA-DSCHVLSRYLPVNGPWKVDGMNSRVYTSQFSNDGSFFVAASQESNIKVYN 68
SG+ +A+ D+ +L P ++ G V + QFS G+ +AS++ ++++
Sbjct: 29 SGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSPLGNLLASASRDRTVRLWI 88
Query: 69 VDKNWKIQKDIETKALRWTITDTSLSPDQRFLVYAS 104
DK K E KA + S D +FL AS
Sbjct: 89 PDKRGKSS---EFKAHTAPVRSVDFSADGQFLATAS 121
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 168 (64.2 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 50/171 (29%), Positives = 79/171 (46%)
Query: 88 ITDTSLSPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSV 147
I + SPD ++L +I I+NI D+ + +H + +G I S+
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGK-------LLH-----TLEGHA--MPIRSL 196
Query: 148 KFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSL 207
FSTD Q LV A D +I +YD+Q + + H S V V F+ + H + S SD S+
Sbjct: 197 TFSTDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDDAHFVSSSSDKSV 256
Query: 208 CKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWD 258
KVWD +S + H + + + R+G +S G DQ ++D
Sbjct: 257 -KVWD----VSARTCVHTFLDHQDQVWGVKYNRNGSKIVSVGDDQEIHVYD 302
Score = 131 (51.2 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 45/195 (23%), Positives = 82/195 (42%)
Query: 192 ADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKD 251
+++ L+ SGS D L KVW + + L GH G+ +D G S+ D
Sbjct: 28 SNDGSELVISGSLDDLVKVW--KWSDERLEMQWALEGHQLGVVSVDVSPSGNIMASSSLD 85
Query: 252 QTTKLWDIRKMSSNTTDNSRLRDYDWDYRWMEYPSYARRLKHPHDQSL---ATYKGHSVL 308
+LWD+ + ++ D W + + H ++ T K L
Sbjct: 86 AHIRLWDLESGKQIRSIDAGPVDA-WSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSL 144
Query: 309 RTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPM 368
T + S YS KY+ +G+ D + I+D+ +G + L+ H P+R + +
Sbjct: 145 DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSTDSQL 204
Query: 369 LISSSWDCNIVRWEI 383
L+++S D I +++
Sbjct: 205 LVTASDDGYIKIYDV 219
Score = 82 (33.9 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 24/86 (27%), Positives = 43/86 (50%)
Query: 299 LATYKGHSV-LRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPV 357
L T +GH++ +R+L +ST + + T S D + IYD+ + A L H + V
Sbjct: 183 LHTLEGHAMPIRSLT-------FSTDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWV 235
Query: 358 RDCCWHPIYPMLISSSWDCNIVRWEI 383
+ + P +SSS D ++ W++
Sbjct: 236 LNVAFSPDDAHFVSSSSDKSVKVWDV 261
Score = 73 (30.8 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 20/88 (22%), Positives = 45/88 (51%)
Query: 34 WKVDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKAL-RWTITDTS 92
W ++G V + S G+ ++S +++I++++++ +I + I+ + W++ +
Sbjct: 58 WALEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQI-RSIDAGPVDAWSV---A 113
Query: 93 LSPDQRFLVYASICAIVNIVDVGSSARE 120
SPD + L S VNI V + +E
Sbjct: 114 FSPDSQHLATGSHVGKVNIFGVETGKKE 141
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 170 (64.9 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 66/255 (25%), Positives = 113/255 (44%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
I +++S D + + +A +D + +D+++ + R H+ +N+V + ++ S S
Sbjct: 112 ILDLQWSRDSKTIFSASADMTLASWDIESGQRIRRYIGHEEVINSVEISKRGQEMLVSAS 171
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMS 263
DD +WD R + A L L IT + G S G D +WDIRK +
Sbjct: 172 DDGTMGIWDPR----QKEAIDYLETELP-ITAVAQSEAGNEVFSGGIDNAIHVWDIRKKA 226
Query: 264 -----SNTTDNSRLRDYDWDYRWM---EYPSYAR----RLKHPHDQSLATYKGHSV--LR 309
+ D + D + + + S R R P ++ + TY G V +
Sbjct: 227 IVYSMAGHMDTITSLEVSPDSQTLLSNSFDSTVRTWDIRPFAPTNRHIRTYDGAPVGLEK 286
Query: 310 TLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIY-PM 368
LIR ++P A I GS D SV ++D +G + KL H V D + P P+
Sbjct: 287 NLIRASWNP----AGDKIAAGSGDRSVVVWDFKTGKILYKLPGHKGTVNDVRFTPNNEPI 342
Query: 369 LISSSWDCNIVRWEI 383
++S+S D N++ E+
Sbjct: 343 IVSASSDRNLMLGEL 357
>ZFIN|ZDB-GENE-000616-4 [details] [associations]
symbol:apaf1 "apoptotic protease activating factor 1"
species:7955 "Danio rerio" [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 ZFIN:ZDB-GENE-000616-4 GO:GO:0006952
GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
InterPro:IPR017251 PIRSF:PIRSF037646 GeneTree:ENSGT00700000104017
EMBL:CT868708 EMBL:CT025647 IPI:IPI00996819
Ensembl:ENSDART00000127261 Uniprot:E7F2V1
Length = 1264
Score = 177 (67.4 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 80/345 (23%), Positives = 142/345 (41%)
Query: 47 QFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKAL---RWTITDTSLSPDQRFLVYA 103
QF+N G + A+ SN K N K W K + + SP+ +L +
Sbjct: 710 QFTNTGRRVLLATC-SNDKFTNT-KLWNPNKKTSQNTMFGHMEPVNHCCFSPNDLYLATS 767
Query: 104 SICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVK-FSTDGQELVAAGSD 162
S + + +V SSA E ++ + F + DE+ + +S DG +++ A
Sbjct: 768 SSDGSLKLFEV-SSANE-WKSIDVDS---FFPESDEEIKAMVKCSTWSADGSQIICAAR- 821
Query: 163 NFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRA 222
N ++V+D++ + L + + C A L+ ++W+ SK +A
Sbjct: 822 NTVFVFDVETSDLLLELKTSRLSTIQFCHACPNSSLLAVALSHYTVELWNFES--SKKKA 879
Query: 223 NGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSSNTTDNSRLRDYDWDYRWM 282
GHL + + DG +S+ DQT +LW+ ++ +++ + RD D +
Sbjct: 880 E--CSGHLSWVHCVQFSPDGSLLLSSSDDQTIRLWETDRVHTSSAVALK-RDTDVLFSHS 936
Query: 283 EY----PSYARRLKHPHDQSLATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYI 338
+ P + RL+ + A L + IRC S ++ GS D +V +
Sbjct: 937 DATIIAPDSSNRLQVLSGSTGAVVLESEELSSRIRCSC---ISRNAAFVALGSEDGTVQV 993
Query: 339 YDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNI-VRWE 382
++ S KL H V C + +LI+SS D I V W+
Sbjct: 994 IEVPSSKASVKLSGHTKTVHHCQFTDDCEILITSSEDSTIRVVWK 1038
Score = 128 (50.1 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 65/251 (25%), Positives = 106/251 (42%)
Query: 157 VAAGS-DNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRC 215
VA GS D + V ++ ++K S+++ H V+ F D+ LI S D ++ VW R
Sbjct: 982 VALGSEDGTVQVIEVPSSKASVKLSGHTKTVHHCQFTDDCEILITSSEDSTIRVVWKWRT 1041
Query: 216 FISKGRANGVLMGHLEGIT---FIDSRRDGRYFISNGKDQTTKLWDIRK--MSSNTT--D 268
G VL GH+E + + S R F S D T K+WD+ + M + +
Sbjct: 1042 ----GECM-VLQGHMEPVRKFHLLSSSSSPRLF-SWSFDGTVKVWDLTRGQMLQDLVCHE 1095
Query: 269 NSRLR-DYDWDYRWMEYPSYARRLKHPHDQSLATYKGHSVLRTLIRCYFSPEYSTAQKYI 327
+ L D D R S R K S A++K +L C S +S K +
Sbjct: 1096 GAVLSCDVSSDGRLFATTSANRTAKKVW--SSASWKMIFLLEGHKDCVRSCRFSWDNKRL 1153
Query: 328 YTGSSDNSVYIYDLVSGA--QVAKLD-------FHNAPVRDCCWHPIYPMLISSSWDCNI 378
TG + + ++ ++ GA ++ D +H V D + P +L+S+
Sbjct: 1154 ATGDDNGEIRLWSMLDGALLKICSRDTKDSMDSYHGGWVTDLHFSPDNRVLVSTG---GY 1210
Query: 379 VRWEIPGIGEA 389
++W GEA
Sbjct: 1211 IKWWSVESGEA 1221
Score = 61 (26.5 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 29/109 (26%), Positives = 51/109 (46%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDK---NWKIQKDIETKALRWTITD-TSL 93
G S V+ QFS DGS +++S + I+++ D+ + + +T L ++ +D T +
Sbjct: 883 GHLSWVHCVQFSPDGSLLLSSSDDQTIRLWETDRVHTSSAVALKRDTDVL-FSHSDATII 941
Query: 94 SPDQ--RFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDED 140
+PD R V + V + S+R + I + F A G ED
Sbjct: 942 APDSSNRLQVLSGSTGAVVLESEELSSRIRCS--CISRNAAFVALGSED 988
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 170 (64.9 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 62/258 (24%), Positives = 114/258 (44%)
Query: 131 LDFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVC 190
L+ + G D I S+ FS G+++ + D + V++++ + R HK V V
Sbjct: 10 LERNFKGHRD--AITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQ 67
Query: 191 FADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLM-GHLEGITFIDSRRDGRYFISNG 249
F+ + HL+ S S D ++W + + VL H + + DG+ ++
Sbjct: 68 FSP-SAHLLASSSRDKTVRLW-----VPSVKGESVLFRAHTGSVRSVCFSADGQSLLTAS 121
Query: 250 KDQTTKLWDIRKMSSNTTDNSRLRDYD-WDYRWMEY-PSYARRLKHPHDQSLATYKGHSV 307
DQ+ KLW + + T LR+++ W R + P + D+++ + S
Sbjct: 122 DDQSIKLWSVHRQKIICT----LREHNNW-VRCARFSPDGQLMVSVSDDRTVKLWDASS- 175
Query: 308 LRTLIRCYFSPE-YSTAQKY------IYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDC 360
R LI + P YS+ + I T SSDN+V ++D+ + + H+A V
Sbjct: 176 -RQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNAL 234
Query: 361 CWHPIYPMLISSSWDCNI 378
+HP L+++S D +
Sbjct: 235 SFHPSGNHLLTASSDSTL 252
Score = 134 (52.2 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 55/214 (25%), Positives = 88/214 (41%)
Query: 71 KNWKIQKDIETKALR----WTITDTSLSPDQRFLVYASICAIVNIVDVGSSARESLANVT 126
K W + + LR W + SPD + +V S V + D +S+R+
Sbjct: 127 KLWSVHRQKIICTLREHNNW-VRCARFSPDGQLMVSVSDDRTVKLWD--ASSRQ-----L 178
Query: 127 IHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDV 186
IH F G + V F + A SDN + V+D++ + H + V
Sbjct: 179 IHT---FCEPGGYSSY----VDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAV 231
Query: 187 NTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFI 246
N + F HL+ + SD +L K+ D + +GR L GH + + R G F
Sbjct: 232 NALSFHPSGNHLLTASSDSTL-KILD----LLEGRLLYTLHGHQGSASCVSFSRSGDQFA 286
Query: 247 SNGKDQTTKLWDIRKMSSNTTDNSRLRDYDWDYR 280
S G DQ +W + + ++ D SR+ D+R
Sbjct: 287 SAGSDQQVMVW---RTNFDSVDYSRVLQQKRDHR 317
Score = 118 (46.6 bits), Expect = 0.00042, P = 0.00042
Identities = 52/252 (20%), Positives = 100/252 (39%)
Query: 137 GDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETG 196
G +D + V+FS L ++ D + ++ S+ AH V +VCF+ + G
Sbjct: 58 GHKD--AVTCVQFSPSAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSAD-G 114
Query: 197 HLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKL 256
+ + SDD K+W + + + L H + DG+ +S D+T KL
Sbjct: 115 QSLLTASDDQSIKLWS----VHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKL 170
Query: 257 WDI--RKMSSNTTDNSRLRDYDWDYRWMEYPSYARRLKHPHDQSLATY--KGHSVLRTL- 311
WD R++ + Y D+ +PS D ++ + + H++L+
Sbjct: 171 WDASSRQLIHTFCEPGGYSSYV-DF----HPSSTCIATASSDNTVRVWDIRTHTLLQHYQ 225
Query: 312 --IRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPML 369
+ + + ++ T SSD+++ I DL+ G + L H +
Sbjct: 226 VHSAAVNALSFHPSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQGSASCVSFSRSGDQF 285
Query: 370 ISSSWDCNIVRW 381
S+ D ++ W
Sbjct: 286 ASAGSDQQVMVW 297
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 169 (64.5 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 55/244 (22%), Positives = 107/244 (43%)
Query: 141 EFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIF 200
+ G+ + +S+D + +V+A D + ++++ ++ + + H + V C + L+
Sbjct: 129 KLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYV-FCCNFNPQSSLVV 187
Query: 201 SGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWD-- 258
SGS D ++WD + G L H + ++ + RDG S D ++WD
Sbjct: 188 SGSFDESVRIWD----VKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTA 243
Query: 259 ----IRKMSSNTTDNSRLRDYDWDYRWMEYPSYARRLK---HPHDQSLATYKGHSVLRTL 311
I+ + + + + +++ + LK ++L Y GH +
Sbjct: 244 NGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYC 303
Query: 312 IRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPV--RDCCWHPIYPML 369
I FS T K+I +GS D +YI++L + V L+ H PV DC HP+ ++
Sbjct: 304 IFANFSV---TGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDC--HPVQNII 358
Query: 370 ISSS 373
S +
Sbjct: 359 ASGA 362
Score = 128 (50.1 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 53/178 (29%), Positives = 84/178 (47%)
Query: 218 SKGRANGVLMGHLEGIT-FIDSRRD---GRYFISNGKDQTTKLWDIRKM-SSNTTDNSRL 272
+ G AN LM LEG T I S + G+Y ++ D+T K+W++ M T +L
Sbjct: 71 ASGSANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKL 130
Query: 273 --RDYDW--DYRWMEYPSYARRLKHPH---DQSLATYKGHSVLRTLIRCYFSPEYSTAQK 325
D W D R + S + LK + T KGH+ + C F+P+ S
Sbjct: 131 GVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHN--NYVFCCNFNPQSSL--- 185
Query: 326 YIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVR-WE 382
+ +GS D SV I+D+ +G + L H+ PV ++ ++ S S+D +VR W+
Sbjct: 186 -VVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYD-GLVRIWD 241
Score = 128 (50.1 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 56/253 (22%), Positives = 104/253 (41%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
I S KFS G+ L + +D + ++++ C + HK VN + ++ ++ + S S
Sbjct: 90 ISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDS-RCVVSAS 148
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRK-M 262
DD K+++ I R L GH + + +S D++ ++WD++ M
Sbjct: 149 DDKTLKIFE----IVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGM 204
Query: 263 SSNT----TDNSRLRDYDWDYRWMEYPSYARRLKHPHDQSLATYKGHSVLRTLIRCYFSP 318
T +D ++ D + SY L D T G + +TL+ P
Sbjct: 205 CIKTLPAHSDPVSAVSFNRDGSLIASGSYDG-LVRIWD----TANGQCI-KTLVDDENPP 258
Query: 319 ----EYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIY----PMLI 370
++S KYI + D+++ ++D G + + H + C + +I
Sbjct: 259 VAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENS-KYCIFANFSVTGGKWII 317
Query: 371 SSSWDCNIVRWEI 383
S S DC I W +
Sbjct: 318 SGSEDCKIYIWNL 330
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 169 (64.5 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 55/244 (22%), Positives = 107/244 (43%)
Query: 141 EFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIF 200
+ G+ + +S+D + +V+A D + ++++ ++ + + H + V C + L+
Sbjct: 129 KLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYV-FCCNFNPQSSLVV 187
Query: 201 SGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWD-- 258
SGS D ++WD + G L H + ++ + RDG S D ++WD
Sbjct: 188 SGSFDESVRIWD----VKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTA 243
Query: 259 ----IRKMSSNTTDNSRLRDYDWDYRWMEYPSYARRLK---HPHDQSLATYKGHSVLRTL 311
I+ + + + + +++ + LK ++L Y GH +
Sbjct: 244 NGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYC 303
Query: 312 IRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPV--RDCCWHPIYPML 369
I FS T K+I +GS D +YI++L + V L+ H PV DC HP+ ++
Sbjct: 304 IFANFSV---TGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDC--HPVQNII 358
Query: 370 ISSS 373
S +
Sbjct: 359 ASGA 362
Score = 128 (50.1 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 53/178 (29%), Positives = 84/178 (47%)
Query: 218 SKGRANGVLMGHLEGIT-FIDSRRD---GRYFISNGKDQTTKLWDIRKM-SSNTTDNSRL 272
+ G AN LM LEG T I S + G+Y ++ D+T K+W++ M T +L
Sbjct: 71 ASGSANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKL 130
Query: 273 --RDYDW--DYRWMEYPSYARRLKHPH---DQSLATYKGHSVLRTLIRCYFSPEYSTAQK 325
D W D R + S + LK + T KGH+ + C F+P+ S
Sbjct: 131 GVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHN--NYVFCCNFNPQSSL--- 185
Query: 326 YIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVR-WE 382
+ +GS D SV I+D+ +G + L H+ PV ++ ++ S S+D +VR W+
Sbjct: 186 -VVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYD-GLVRIWD 241
Score = 128 (50.1 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 56/253 (22%), Positives = 104/253 (41%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
I S KFS G+ L + +D + ++++ C + HK VN + ++ ++ + S S
Sbjct: 90 ISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDS-RCVVSAS 148
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRK-M 262
DD K+++ I R L GH + + +S D++ ++WD++ M
Sbjct: 149 DDKTLKIFE----IVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGM 204
Query: 263 SSNT----TDNSRLRDYDWDYRWMEYPSYARRLKHPHDQSLATYKGHSVLRTLIRCYFSP 318
T +D ++ D + SY L D T G + +TL+ P
Sbjct: 205 CIKTLPAHSDPVSAVSFNRDGSLIASGSYDG-LVRIWD----TANGQCI-KTLVDDENPP 258
Query: 319 ----EYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIY----PMLI 370
++S KYI + D+++ ++D G + + H + C + +I
Sbjct: 259 VAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENS-KYCIFANFSVTGGKWII 317
Query: 371 SSSWDCNIVRWEI 383
S S DC I W +
Sbjct: 318 SGSEDCKIYIWNL 330
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 172 (65.6 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 57/232 (24%), Positives = 103/232 (44%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQ 97
G +Y+ F+ +G + + S + ++++++ + K + T ++ +T ++SPD
Sbjct: 356 GHEQDIYSLDFAGNGRYIASGSGDKTVRLWDIAEG----KLVYTLSIEDGVTTVAMSPDG 411
Query: 98 RFLVYASICAIVNIVDVGSSAR-ESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQEL 156
++ S+ V + D + E L N DG +D ++SV F+ +G+EL
Sbjct: 412 LYVAAGSLDKTVRVWDTTTGYLVERLEN----------PDGHKDS--VYSVAFAPNGKEL 459
Query: 157 VAAGSDNFIYVYDL-----QAN------KCSLRIPAHKSDVNTVCFADETGHLIFSGSDD 205
V+ D I +++L Q N KC HK V +VC + GH + SGS D
Sbjct: 460 VSGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKDFVLSVCLTPD-GHWVMSGSKD 518
Query: 206 SLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
+ WD I+ G A +L GH + + G F + D ++W
Sbjct: 519 RGVQFWDP---IT-GNAQMMLQGHKNSVISVAPSPTGNLFATGSGDMRARIW 566
Score = 146 (56.5 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 42/147 (28%), Positives = 68/147 (46%)
Query: 115 GSSARESLANVTIHKGLDFSADGDEDEFG---IFSVKFSTDGQELVAAGSDNFIYVYDLQ 171
G + + +VT+ + + D D+ G I SV FS DG+ L D I V+D+
Sbjct: 287 GCNRSAQIFDVTLGQNVAVLQDESVDKSGDLYIRSVCFSPDGKYLATGAEDKQIRVWDIA 346
Query: 172 ANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLE 231
H+ D+ ++ FA G I SGS D ++WD I++G+ L +
Sbjct: 347 TRTIKHIFSGHEQDIYSLDFAGN-GRYIASGSGDKTVRLWD----IAEGKLVYTLSIE-D 400
Query: 232 GITFIDSRRDGRYFISNGKDQTTKLWD 258
G+T + DG Y + D+T ++WD
Sbjct: 401 GVTTVAMSPDGLYVAAGSLDKTVRVWD 427
Score = 133 (51.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 38/119 (31%), Positives = 61/119 (51%)
Query: 147 VKFSTDGQELVAAGSDNFIYVYD--LQANKCSLRIPA-HKSD---VNTVCFADETGHLIF 200
V+FS DG+ L A G + ++D L N L+ + KS + +VCF+ + G +
Sbjct: 275 VRFSRDGKYL-ATGCNRSAQIFDVTLGQNVAVLQDESVDKSGDLYIRSVCFSPD-GKYLA 332
Query: 201 SGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI 259
+G++D +VWD I+ + GH + I +D +GRY S D+T +LWDI
Sbjct: 333 TGAEDKQIRVWD----IATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRLWDI 387
Score = 121 (47.7 bits), Expect = 0.00031, P = 0.00031
Identities = 41/129 (31%), Positives = 61/129 (47%)
Query: 141 EFGIFSVKFSTDGQELVAAGS-DNFIYVYDLQANKCSLRI--P-AHKSDVNTVCFADETG 196
E G+ +V S DG VAAGS D + V+D R+ P HK V +V FA
Sbjct: 399 EDGVTTVAMSPDGL-YVAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPNGK 457
Query: 197 HLIFSGSDDSLCKVWD----RRCFISKGRA---NGVLMGHLEGITFIDSRRDGRYFISNG 249
L+ SGS D K+W+ R+ + S G+ + GH + + + DG + +S
Sbjct: 458 ELV-SGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMSGS 516
Query: 250 KDQTTKLWD 258
KD+ + WD
Sbjct: 517 KDRGVQFWD 525
>POMBASE|SPBC32H8.07 [details] [associations]
symbol:git5 "heterotrimeric G protein beta subunit Git5"
species:4896 "Schizosaccharomyces pombe" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=TAS] [GO:0007190
"activation of adenylate cyclase activity" evidence=TAS]
[GO:0010619 "adenylate cyclase-activating glucose-activated
G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0010972 "negative regulation of G2/M transition of mitotic cell
cycle" evidence=IMP] [GO:0019933 "cAMP-mediated signaling"
evidence=IMP] [GO:0030159 "receptor signaling complex scaffold
activity" evidence=IDA] [GO:0031138 "negative regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032092
"positive regulation of protein binding" evidence=IDA] [GO:0045014
"negative regulation of transcription by glucose" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 PomBase:SPBC32H8.07 GO:GO:0005829 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0032092 GO:GO:0019933 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007190
GenomeReviews:CU329671_GR GO:GO:0030435 GO:GO:0004871 GO:GO:0030159
EMBL:AB004535 GO:GO:0045014 PRINTS:PR00319 GO:GO:0010972
GO:GO:0005834 HOGENOM:HOG000176356 OMA:CMLWDIE InterPro:IPR016346
PIRSF:PIRSF002394 KO:K07972 EMBL:L28061 EMBL:AF092102 PIR:S72457
PIR:T50474 RefSeq:NP_595613.1 ProteinModelPortal:Q10282
STRING:Q10282 EnsemblFungi:SPBC32H8.07.1 GeneID:2539974
KEGG:spo:SPBC32H8.07 OrthoDB:EOG454D7D NextBio:20801117
GO:GO:0010619 GO:GO:0031138 Uniprot:Q10282
Length = 305
Score = 166 (63.5 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 77/330 (23%), Positives = 129/330 (39%)
Query: 69 VDKNWKIQKDIE-TKALR---WTITDTSLSPDQRFLVYASICAIVNIVDVGSSARESLAN 124
+D ++ +I+ T+ L+ I D +S D ++L+ AS ++ + D+ +S + +
Sbjct: 1 MDSGSRVNVNIQGTRVLKNKLGKIPDIDISTDGKYLLSASTNDVLLVWDLHTSNKVAF-- 58
Query: 125 VTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCS-LRIPAHK 183
F A I + FS + + A G +NF VYD + + H
Sbjct: 59 --------FEAPS----VWIMTCAFSPSTKSIAAGGLNNFCVVYDTSVPDADPVELVGHA 106
Query: 184 SDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDG- 242
V+ + D+ GHL+ +GS D C WD I + +A VL GH I +D
Sbjct: 107 GFVSCCKYVDD-GHLL-TGSGDKTCMFWD----IEQAKAISVLKGHEMDIVSLDFLPSNP 160
Query: 243 RYFISNGKDQTTKLWDIRKMSSNTTDNSRLRDYDWDYRWMEYPSYARRLKHPHDQSLATY 302
F++ G D+ KLWD+R T D + +PS A + D +
Sbjct: 161 NLFVTGGCDKLAKLWDLRAAYCCATFPGNTSDIN---SISFFPSNADFVTGAEDGIARCF 217
Query: 303 KGHSVLRTLIRCYFSPEYSTAQKYIYTGSS-------DNSVYIYDLVSGAQVAKLDFHNA 355
+ I Y SP S +++ S D + ++D +S + L H
Sbjct: 218 DIRASAE--IFQYSSPSSSPINSVLFSKSGKLLFIAKDKTCEVWDSISSKTITSLTGHEN 275
Query: 356 PVRDCCWHPIYPMLISSSWDCNIVRWEIPG 385
+ ML + SWD + W G
Sbjct: 276 RISSLALTSDGTMLATGSWDECVRLWSSSG 305
>UNIPROTKB|Q2KID6 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9913 "Bos
taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013 EMBL:BC112677
IPI:IPI00704198 RefSeq:NP_001039827.1 UniGene:Bt.74313
ProteinModelPortal:Q2KID6 STRING:Q2KID6 PRIDE:Q2KID6
Ensembl:ENSBTAT00000029844 GeneID:533951 KEGG:bta:533951 CTD:5356
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595
HOVERGEN:HBG053621 InParanoid:Q2KID6 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB NextBio:20876207 Uniprot:Q2KID6
Length = 513
Score = 111 (44.1 bits), Expect = 7.8e-10, Sum P(2) = 7.8e-10
Identities = 29/111 (26%), Positives = 49/111 (44%)
Query: 154 QELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDR 213
Q V +D I ++DL + K L + H S V V + + +L FS +D K WD
Sbjct: 216 QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYL-FSCGEDKQVKCWD- 273
Query: 214 RCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSS 264
+ + GHL + +D ++ +D T ++WD+R +S
Sbjct: 274 ---LEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKAS 321
Score = 107 (42.7 bits), Expect = 7.8e-10, Sum P(2) = 7.8e-10
Identities = 29/87 (33%), Positives = 41/87 (47%)
Query: 298 SLATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPV 357
S+ T GH+ +RC A+ I TGS D ++ ++DLV+G L H V
Sbjct: 321 SVHTLSGHTNAVATVRC------QAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSV 374
Query: 358 RDCCWHPIYPMLISSSWDCNIVRWEIP 384
R HP + S S D NI +W+ P
Sbjct: 375 RAVVLHPRHYTFASGSPD-NIKQWKFP 400
>UNIPROTKB|O43660 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9606 "Homo
sapiens" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0003714 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871
EMBL:CH471056 GO:GO:0000398 GO:GO:0071013 CTD:5356
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF044333 EMBL:AK002108 EMBL:BC020786 EMBL:BC106004
IPI:IPI00002624 IPI:IPI00382756 RefSeq:NP_001188493.1
RefSeq:NP_002660.1 UniGene:Hs.249996 ProteinModelPortal:O43660
SMR:O43660 IntAct:O43660 MINT:MINT-2999551 STRING:O43660
PhosphoSite:O43660 PaxDb:O43660 PRIDE:O43660
Ensembl:ENST00000302078 Ensembl:ENST00000499023 GeneID:5356
KEGG:hsa:5356 UCSC:uc003iny.3 UCSC:uc003inz.3 GeneCards:GC04M155457
HGNC:HGNC:9089 HPA:HPA035932 MIM:605961 neXtProt:NX_O43660
PharmGKB:PA33416 PhylomeDB:O43660 GenomeRNAi:5356 NextBio:20762
ArrayExpress:O43660 Bgee:O43660 CleanEx:HS_PLRG1
Genevestigator:O43660 GermOnline:ENSG00000171566 Uniprot:O43660
Length = 514
Score = 111 (44.1 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 29/111 (26%), Positives = 49/111 (44%)
Query: 154 QELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDR 213
Q V +D I ++DL + K L + H S V V + + +L FS +D K WD
Sbjct: 217 QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYL-FSCGEDKQVKCWD- 274
Query: 214 RCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSS 264
+ + GHL + +D ++ +D T ++WD+R +S
Sbjct: 275 ---LEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKAS 322
Score = 107 (42.7 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 29/87 (33%), Positives = 41/87 (47%)
Query: 298 SLATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPV 357
S+ T GH+ +RC A+ I TGS D ++ ++DLV+G L H V
Sbjct: 322 SVHTLSGHTNAVATVRC------QAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSV 375
Query: 358 RDCCWHPIYPMLISSSWDCNIVRWEIP 384
R HP + S S D NI +W+ P
Sbjct: 376 RAVVLHPRHYTFASGSPD-NIKQWKFP 401
>UNIPROTKB|E2QYT6 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GeneTree:ENSGT00700000104496 OMA:ITAEADK EMBL:AAEX03010065
Ensembl:ENSCAFT00000013353 Uniprot:E2QYT6
Length = 515
Score = 111 (44.1 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 29/111 (26%), Positives = 49/111 (44%)
Query: 154 QELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDR 213
Q V +D I ++DL + K L + H S V V + + +L FS +D K WD
Sbjct: 218 QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYL-FSCGEDKQVKCWD- 275
Query: 214 RCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSS 264
+ + GHL + +D ++ +D T ++WD+R +S
Sbjct: 276 ---LEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKAS 323
Score = 107 (42.7 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 29/87 (33%), Positives = 41/87 (47%)
Query: 298 SLATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPV 357
S+ T GH+ +RC A+ I TGS D ++ ++DLV+G L H V
Sbjct: 323 SVHTLSGHTNAVATVRC------QAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSV 376
Query: 358 RDCCWHPIYPMLISSSWDCNIVRWEIP 384
R HP + S S D NI +W+ P
Sbjct: 377 RAVVLHPRHYTFASGSPD-NIKQWKFP 402
>CGD|CAL0005013 [details] [associations]
symbol:SWD3 species:5476 "Candida albicans" [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IEA]
[GO:0051568 "histone H3-K4 methylation" evidence=IEA] [GO:0006348
"chromatin silencing at telomere" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005013 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
RefSeq:XP_712497.1 ProteinModelPortal:Q59S83 STRING:Q59S83
GeneID:3645890 KEGG:cal:CaO19.3457 Uniprot:Q59S83
Length = 383
Score = 143 (55.4 bits), Expect = 8.0e-10, Sum P(2) = 8.0e-10
Identities = 31/122 (25%), Positives = 58/122 (47%)
Query: 138 DEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGH 197
+E ++KFS +GQ + S+ IY+Y+ K + H ++ + ++ +
Sbjct: 23 NEPSITFTAIKFSPNGQNFACSSSNGKIYIYNTTTGKLITTLSGHTKGISDIVYSPINSN 82
Query: 198 LIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
++ S SDD ++W+ I++ R +L H IT + + G IS D+T +W
Sbjct: 83 ILASCSDDLTIRLWN----ITQQRCIKLLRKHTYHITTLKFTQKGNILISGSSDETITIW 138
Query: 258 DI 259
DI
Sbjct: 139 DI 140
Score = 68 (29.0 bits), Expect = 8.0e-10, Sum P(2) = 8.0e-10
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 327 IYTGSSDNSVYIYDLVS-GAQV-AKLDFHNAPVRDCCWHPIYPMLISSSWD 375
+ +GSSD ++ I+D+ S G ++ L H+ PV P +++S+S+D
Sbjct: 126 LISGSSDETITIWDITSNGGKILTTLAAHSDPVSSIALTPDDSIIVSASYD 176
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 177 (67.4 bits), Expect = 9.8e-10, P = 9.8e-10
Identities = 67/284 (23%), Positives = 117/284 (41%)
Query: 107 AIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIY 166
A+ NI + + + A+ + F G + G SV FS D + L +A D +
Sbjct: 233 ALWNISGIKCAPLQVYASALLFSPAQFK--GHDRAVG--SVSFSHDSRLLASASGDGTVK 288
Query: 167 VYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVL 226
++D + + H V +V F+ ++ L+ S SDD K+WD + G +L
Sbjct: 289 IWDTATSFLQNTLEGHNEWVKSVVFSHDS-RLLASASDDGTVKIWDT----ATGTLQRML 343
Query: 227 MGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSSNTTDNSR--LRDYDWDYRWMEY 284
GH + + + D R S D+T ++W+ TT R D++ + +
Sbjct: 344 KGHNDSVRSVVFSHDSRLIASGSNDRTVRIWE------TTTGLLRHTFEDHEDSVMAVSF 397
Query: 285 PSYARRLKHPHDQSLA----TYKG--HSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYI 338
+RRL D T G +VL C S +S + + + S D +V I
Sbjct: 398 AHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKI 457
Query: 339 YDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWE 382
+ +G+ L+ HN VR + ++ S+S D + W+
Sbjct: 458 WHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWD 501
Score = 150 (57.9 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 62/243 (25%), Positives = 98/243 (40%)
Query: 146 SVKFSTDGQELVAAGS-DNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSD 204
SV FS D + L+A+GS D + +++ H+ V V FA ++ L S SD
Sbjct: 352 SVVFSHDSR-LIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLA-SASD 409
Query: 205 DSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSS 264
K+WD R G VL GH + + + D R S D+T K+W S
Sbjct: 410 GGNVKIWDTRT----GSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSL 465
Query: 265 NTTDNSRLRDYDWDYRWMEYPSYARRLKHPHDQ------SLATYKGHSVLRTLIRCYFSP 318
T DW R + + +R + D AT + L + S
Sbjct: 466 QRTLEGH---NDW-VRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSV 521
Query: 319 EYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNI 378
+S + + + S D +V I+D +G+ L+ H+ V + P +L S+S D +
Sbjct: 522 VFSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTV 581
Query: 379 VRW 381
W
Sbjct: 582 KIW 584
Score = 147 (56.8 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 60/245 (24%), Positives = 98/245 (40%)
Query: 146 SVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDD 205
SV FS D + L +A D + ++D + H V +V F+ ++ LI SGS+D
Sbjct: 310 SVVFSHDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDS-RLIASGSND 368
Query: 206 SLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSSN 265
++W+ + G H + + + D R S K+WD R S
Sbjct: 369 RTVRIWET----TTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQ 424
Query: 266 TT-----DNSRLRDYDWDYRWMEYPSYARRLK--HPHDQSLA-TYKGHSVLRTLIRCYFS 317
D + D R + S R +K H SL T +GH+ +R S
Sbjct: 425 NVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHN---DWVR---S 478
Query: 318 PEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCN 377
+S + I + S D +V I+D + L+ H+ VR + +L S+S D
Sbjct: 479 VVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMT 538
Query: 378 IVRWE 382
+ W+
Sbjct: 539 VKIWD 543
Score = 65 (27.9 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 21/90 (23%), Positives = 39/90 (43%)
Query: 33 PWKVDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTS 92
P + G + V + FS+D +AS + +K+++ ++ +Q +E W +
Sbjct: 256 PAQFKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSF-LQNTLEGHN-EW-VKSVV 312
Query: 93 LSPDQRFLVYASICAIVNIVDVGSSARESL 122
S D R L AS V I D + + +
Sbjct: 313 FSHDSRLLASASDDGTVKIWDTATGTLQRM 342
>TAIR|locus:2176085 [details] [associations]
symbol:AT5G64730 "AT5G64730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 KO:K13124 OMA:CKQGAVR EMBL:AY046038
EMBL:AY113956 IPI:IPI00540873 RefSeq:NP_568993.1 UniGene:At.9776
ProteinModelPortal:Q94AH2 SMR:Q94AH2 PaxDb:Q94AH2 PRIDE:Q94AH2
EnsemblPlants:AT5G64730.1 GeneID:836594 KEGG:ath:AT5G64730
TAIR:At5g64730 InParanoid:Q94AH2 PhylomeDB:Q94AH2
ProtClustDB:CLSN2690079 ArrayExpress:Q94AH2 Genevestigator:Q94AH2
Uniprot:Q94AH2
Length = 299
Score = 153 (58.9 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 60/264 (22%), Positives = 106/264 (40%)
Query: 128 HKGL---DFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKS 184
H+G+ + + G E + V ++D + + G D +Y +D+ + + H
Sbjct: 48 HRGILIKTYKSHGRE----VRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDG 103
Query: 185 DVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRY 244
+VN V F D + ++ +G D SL +VWD C ++ L+ + + +
Sbjct: 104 EVNAVKFNDSSSVVVSAGFDRSL-RVWD--CRSHSVEPVQIIDTFLDTVMSVVLTKTE-- 158
Query: 245 FISNGKDQTTKLWDIR---KMSSNTTDNSRLRDYDWDYRWME---YPSYARRLKHPHDQS 298
I D T + +D+R +MS N D + S R L +
Sbjct: 159 IIGGSVDGTVRTFDMRIGREMSDNLGQPVNCISISNDGNCVLAGCLDSTLRLLDRTTGEL 218
Query: 299 LATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVR 358
L YKGH C + + ++ GS D V+ +DLV ++K H+ V
Sbjct: 219 LQVYKGHISKSFKTDCCLT----NSDAHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVT 274
Query: 359 DCCWHPIYPMLISSSWDCNIVRWE 382
+HP +++SS D I W+
Sbjct: 275 SVSYHPKEDCMLTSSVDGTIRVWK 298
Score = 50 (22.7 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 9/41 (21%), Positives = 21/41 (51%)
Query: 28 LPVNGPWKVDGMNSRVYTSQFSNDGSFFVAASQESNIKVYN 68
LP + G V ++F+ DG++ + ++ I+++N
Sbjct: 6 LPTKEAHILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWN 46
>DICTYBASE|DDB_G0289115 [details] [associations]
symbol:mhkB "myosin heavy chain kinase B"
species:44689 "Dictyostelium discoideum" [GO:0018107
"peptidyl-threonine phosphorylation" evidence=IDA] [GO:0031037
"myosin II filament disassembly" evidence=IMP] [GO:0005826
"actomyosin contractile ring" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0045159 "myosin II
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA;IC]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;IDA] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IDA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0289115
GO:GO:0005524 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046777
GenomeReviews:CM000154_GR GO:GO:0000910 KO:K00924 GO:GO:0005826
GO:GO:0018107 EMBL:AAFI02000130 BRENDA:2.7.11.7 GO:GO:0031037
GO:GO:0016905 EMBL:U90946 RefSeq:XP_636368.1
ProteinModelPortal:P90648 EnsemblProtists:DDB0191333 GeneID:8626969
KEGG:ddi:DDB_G0289115 OMA:NDERNTP ProtClustDB:CLSZ2846619
Uniprot:P90648
Length = 732
Score = 171 (65.3 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 85/349 (24%), Positives = 149/349 (42%)
Query: 49 SNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQRFLVYASICAI 108
SNDG+ + S K +++K + + + +++ T + + + V + +C
Sbjct: 411 SNDGNTLNTNKERSKSKSIDLEKPEILINNKKKESINLE-TIKLIETIKGYHVTSHLCIC 469
Query: 109 VNIVDVGSSARESLANVTIHKGLDFSA----DGDEDEFGIFSVKFSTDGQELVAAGSDNF 164
N++ G S ++ V +K + G E + S+ ++ Q L + SD+
Sbjct: 470 DNLLFTGCS--DNSIRVYDYKSQNMECVQTLKGHEGP--VESICYND--QYLFSGSSDHS 523
Query: 165 IYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANG 224
I V+DL+ +C + H V+TV D+ +FSGS D KVWD + K
Sbjct: 524 IKVWDLKKLRCIFTLEGHDKPVHTVLLNDK---YLFSGSSDKTIKVWDLKTLECKY---- 576
Query: 225 VLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSSNTTDNSRLRDYDWDYRW--- 281
L H + + G+Y S D+T K+WD++ N T + W
Sbjct: 577 TLESHARAVKTLCI--SGQYLFSGSNDKTIKVWDLKTFRCNYTLKGHTK---WVTTICIL 631
Query: 282 ---MEYPSYARRLKHPHDQSL---ATYKGHSV-LRTLIRCYFSPEYSTAQKYIYTGSSDN 334
+ SY + ++ + +SL AT +GH + ++ C K ++T S DN
Sbjct: 632 GTNLYSGSYDKTIRVWNLKSLECSATLRGHDRWVEHMVIC---------DKLLFTASDDN 682
Query: 335 SVYIYDLVSGAQVAKLDFHNAPVRDCC--WHPIYPMLISSSWDCNIVRW 381
++ I+DL + L+ HNA V+ C W +IS S D +I W
Sbjct: 683 TIKIWDLETLRCNTTLEGHNATVQ-CLAVWED-KKCVISCSHDQSIRVW 729
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 165 (63.1 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 64/239 (26%), Positives = 102/239 (42%)
Query: 147 VKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDS 206
+ F G L + +D I ++D Q C + H +V+ V F +G + S S D
Sbjct: 154 IDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTP-SGDQLISSSRDK 212
Query: 207 LCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSSNT 266
KVW+ + G L+GH + + I DG S DQT K W+I K
Sbjct: 213 TIKVWEA----ATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLA 268
Query: 267 TDNSRLRDYDWDYRWMEYPSYARRLKHPHDQSLATYKGHSVLRTLIRCYFSPEYSTAQK- 325
T R++ + + S A + P L+T +G S ++ P + +
Sbjct: 269 T----YREHSHVVECLAF-STANIIDIP-GSLLSTPEGKSKVKQ------GPGGNLVGQC 316
Query: 326 -YIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWEI 383
Y+ TGS D ++ I++L +G +A H+ VR +HP L+S D I W+I
Sbjct: 317 GYLATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDI 375
Score = 128 (50.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 34/115 (29%), Positives = 57/115 (49%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
I SVKF +V+A D I V+D ++ + + H + V + F D+TG+L+ S S
Sbjct: 109 INSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDF-DKTGNLLASCS 167
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWD 258
D K+WD + + L GH ++ + G IS+ +D+T K+W+
Sbjct: 168 ADLTIKLWDFQTY----DCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWE 218
Score = 55 (24.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 21/88 (23%), Positives = 37/88 (42%)
Query: 299 LATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLD---FHNA 355
LATY GH +R F P K++ + D ++ ++D+ G + ++ H
Sbjct: 339 LATYIGHDNWVRAVR--FHP----CGKFLLSVGDDKTIRVWDIAQGRCIKTINEAHTHFI 392
Query: 356 PVRDCCWHPIYPMLISSSWDCNIVRWEI 383
D C H P + + D I W++
Sbjct: 393 SCLDFCLHN--PHIATGGVDDVIKVWKL 418
Score = 42 (19.8 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 9/33 (27%), Positives = 20/33 (60%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVD 70
G + + + +F S V+AS+++ IKV++ +
Sbjct: 104 GHRNCINSVKFHPSFSLMVSASEDATIKVWDFE 136
>FB|FBgn0023423 [details] [associations]
symbol:slmb "supernumerary limbs" species:7227 "Drosophila
melanogaster" [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0030111 "regulation of Wnt
receptor signaling pathway" evidence=IMP;TAS] [GO:0008588 "release
of cytoplasmic sequestered NF-kappaB" evidence=IMP;TAS] [GO:0008589
"regulation of smoothened signaling pathway" evidence=TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=NAS] [GO:0030178 "negative regulation
of Wnt receptor signaling pathway" evidence=IMP;NAS] [GO:0019005
"SCF ubiquitin ligase complex" evidence=NAS;TAS] [GO:0006508
"proteolysis" evidence=IMP] [GO:0045475 "locomotor rhythm"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=IMP;IPI]
[GO:0007611 "learning or memory" evidence=IMP] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0046843 "dorsal
appendage formation" evidence=IMP] [GO:0030720 "oocyte localization
involved in germarium-derived egg chamber formation" evidence=IMP]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0030727
"germarium-derived female germ-line cyst formation" evidence=IMP]
[GO:0045849 "negative regulation of nurse cell apoptotic process"
evidence=IMP] [GO:0030707 "ovarian follicle cell development"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=IMP] [GO:0007304 "chorion-containing eggshell formation"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0046599 "regulation of centriole replication" evidence=IDA]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 SMART:SM01028 GO:GO:0007088
GO:GO:0008355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 GO:GO:0006508 SUPFAM:SSF81383 GO:GO:0007298
GO:GO:0045475 GO:GO:0019005 GO:GO:0004842 GO:GO:0030178
GO:GO:0046843 GO:GO:0030720 GO:GO:0030713 GO:GO:0030512
GO:GO:0030727 GO:GO:0030708 GO:GO:0008588 GO:GO:0045879
GO:GO:0046599 HSSP:Q9Y297 GO:GO:0060253 EMBL:AF032878
ProteinModelPortal:O44382 SMR:O44382 IntAct:O44382 STRING:O44382
PaxDb:O44382 PRIDE:O44382 FlyBase:FBgn0023423 HOGENOM:HOG000102803
InParanoid:O44382 OrthoDB:EOG4S7H55 ArrayExpress:O44382 Bgee:O44382
GO:GO:0045849 Uniprot:O44382
Length = 510
Score = 168 (64.2 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 62/254 (24%), Positives = 118/254 (46%)
Query: 139 EDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHL 198
E+ G++ +++ DG+ +V+ DN I ++D +C + H V + + D+ +
Sbjct: 208 ENSKGVYCLQYD-DGK-IVSGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQYDDK---V 262
Query: 199 IFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWD 258
I SGS DS +VWD ++ G L+ H E + + R + ++ KD++ +WD
Sbjct: 263 IISGSSDSTVRVWD----VNTGEMVNTLIHHCEAVLHL--RFNNGMMVTCSKDRSIAVWD 316
Query: 259 IRKMSSNTT------DNSRLRDYDWDYRWMEYPSYARRLKHPHDQS---LATYKGHSVLR 309
+ S T + + D+D +++ S R +K + + T GH +
Sbjct: 317 MTSPSEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWSTSTCEFVRTLNGH---K 373
Query: 310 TLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPML 369
I C +Y + + +GSSDNS+ ++D+ GA + L+ H VR C +
Sbjct: 374 RGIACL---QYR--DRLVVSGSSDNSIRLWDIECGACLRVLEGHEELVR--CIRFDTKRI 426
Query: 370 ISSSWDCNIVRWEI 383
+S ++D I W++
Sbjct: 427 VSGAYDGKIKVWDL 440
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 164 (62.8 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 51/213 (23%), Positives = 94/213 (44%)
Query: 92 SLSPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFST 151
S P + V S C I + + + S+ +V K + + D ++ + S+ +S
Sbjct: 124 SFGPVDLWTVQFSPCNKYVISGL-NDGKISMYSVETGKA-EQTLDAQNGKYTL-SIAYSP 180
Query: 152 DGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVW 211
DG+ + + D I ++D+ A K + H V ++CF+ + L+ + SDD K++
Sbjct: 181 DGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNS-QLLLTASDDGHMKLY 239
Query: 212 DRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI--RKMSSNTTDN 269
D ++ G L GH + + DG++F S+ D + K+WD RK ++
Sbjct: 240 D----VTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERKCLHTFAEH 295
Query: 270 SRLRDYDWDYRWMEYPSYARRLKHPHDQSLATY 302
+ D W R+ P + D+SL Y
Sbjct: 296 T---DQVWGVRYS--PGNDKVASASEDKSLNIY 323
Score = 150 (57.9 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 53/193 (27%), Positives = 85/193 (44%)
Query: 198 LIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
L+ G DD L KVWD + + + L GH G+ + DG+ S+ D T LW
Sbjct: 55 LVTGGLDD-LVKVWDLQ-EDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCLW 112
Query: 258 DIRKMSSNTTDNSRLRDYD-WDYRWMEYPSYARRLKHPHDQSLATY-----KGHSVLRTL 311
D R S + D W ++ Y + +D ++ Y K L
Sbjct: 113 DAR--SGDKKHLLSFGPVDLWTVQFSPCNKYV--ISGLNDGKISMYSVETGKAEQTLDAQ 168
Query: 312 IRCY-FSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLI 370
Y S YS KYI +G+ D + I+D+ +G V L+ H PVR C+ P +L+
Sbjct: 169 NGKYTLSIAYSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLL 228
Query: 371 SSSWDCNIVRWEI 383
++S D ++ +++
Sbjct: 229 TASDDGHMKLYDV 241
Score = 118 (46.6 bits), Expect = 0.00028, P = 0.00028
Identities = 40/175 (22%), Positives = 84/175 (48%)
Query: 43 VYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQRFLVY 102
++T QFS + ++ + I +Y+V+ K ++ ++ + ++T++ + SPD +++
Sbjct: 130 LWTVQFSPCNKYVISGLNDGKISMYSVETG-KAEQTLDAQNGKYTLS-IAYSPDGKYIAS 187
Query: 103 ASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGSD 162
+I I+ I DV + + + L+ A + S+ FS + Q L+ A D
Sbjct: 188 GAIDGIITIFDVAAGK--------VVQTLEGHA------MPVRSLCFSPNSQLLLTASDD 233
Query: 163 NFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDS--LCKVWDRRC 215
+ +YD+ + + H S V V F+++ H S SD+S + +R+C
Sbjct: 234 GHMKLYDVTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERKC 288
>UNIPROTKB|F1S8U2 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:CU469143 EMBL:CT737224
EMBL:CT737143 Ensembl:ENSSSCT00000011555 Uniprot:F1S8U2
Length = 506
Score = 167 (63.8 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 61/255 (23%), Positives = 118/255 (46%)
Query: 139 EDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFA-DETGH 197
E G++ +++ D Q++V+ DN I ++D +C + H V +C DE
Sbjct: 202 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSV--LCLQYDE--R 255
Query: 198 LIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
+I +GS DS +VWD ++ G L+ H E + + R + ++ KD++ +W
Sbjct: 256 VIITGSSDSTVRVWD----VNTGEMLNTLIHHCEAVLHL--RFNNGMMVTCSKDRSIAVW 309
Query: 258 DIRKMSSNTT------DNSRLRDYDWDYRWMEYPSYARRLKHPHDQS---LATYKGHSVL 308
D+ + T + + D+D +++ S R +K + + + T GH
Sbjct: 310 DMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGH--- 366
Query: 309 RTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPM 368
+ I C +Y + + +GSSDN++ ++D+ GA + L+ H VR C
Sbjct: 367 KRGIACL---QYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR--CIRFDNKR 419
Query: 369 LISSSWDCNIVRWEI 383
++S ++D I W++
Sbjct: 420 IVSGAYDGKIKVWDL 434
>RGD|1359721 [details] [associations]
symbol:Btrc "beta-transducin repeat containing E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000209
"protein polyubiquitination" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0006470
"protein dephosphorylation" evidence=IEA;ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0008013 "beta-catenin binding" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0030163 "protein catabolic
process" evidence=ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0033598 "mammary gland epithelial cell
proliferation" evidence=IEA;ISO] [GO:0042753 "positive regulation
of circadian rhythm" evidence=IEA;ISO] [GO:0043122 "regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0045309
"protein phosphorylated amino acid binding" evidence=IEA;ISO]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA;ISO] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA;ISO]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 CTD:8945 HOGENOM:HOG000006638 HOVERGEN:HBG002521
KO:K03362 OrthoDB:EOG4F1X2M EMBL:BC085125 IPI:IPI00951294
RefSeq:NP_001007149.2 UniGene:Rn.21800 SMR:Q5U4E5 STRING:Q5U4E5
Ensembl:ENSRNOT00000064259 GeneID:361765 KEGG:rno:361765
UCSC:RGD:1359721 InParanoid:Q5U4E5 NextBio:677539
Genevestigator:Q5U4E5 Uniprot:Q5U4E5
Length = 506
Score = 167 (63.8 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 61/255 (23%), Positives = 118/255 (46%)
Query: 139 EDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFA-DETGH 197
E G++ +++ D Q++V+ DN I ++D +C + H V +C DE
Sbjct: 202 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSV--LCLQYDE--R 255
Query: 198 LIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
+I +GS DS +VWD ++ G L+ H E + + R + ++ KD++ +W
Sbjct: 256 VIITGSSDSTVRVWD----VNAGEMLNTLIHHCEAVLHL--RFNNGMMVTCSKDRSIAVW 309
Query: 258 DIRKMSSNTT------DNSRLRDYDWDYRWMEYPSYARRLKHPHDQS---LATYKGHSVL 308
D+ + T + + D+D +++ S R +K + + + T GH
Sbjct: 310 DMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGH--- 366
Query: 309 RTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPM 368
+ I C +Y + + +GSSDN++ ++D+ GA + L+ H VR C
Sbjct: 367 KRGIACL---QYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR--CIRFDNKR 419
Query: 369 LISSSWDCNIVRWEI 383
++S ++D I W++
Sbjct: 420 IVSGAYDGKIKVWDL 434
>POMBASE|SPBC713.05 [details] [associations]
symbol:SPBC713.05 "WD repeat protein, human MAPK
organizer 1 (MORG1) family (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISS]
[GO:0071276 "cellular response to cadmium ion" evidence=IMP]
[GO:0071585 "detoxification of cadmium ion" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBC713.05 GO:GO:0005829 GO:GO:0005634 GO:GO:0043234
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0071276 GO:GO:0071585
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045292
HOGENOM:HOG000091642 KO:K13124 OMA:CKQGAVR RefSeq:NP_595344.1
ProteinModelPortal:Q9C1X0 EnsemblFungi:SPBC713.05.1 GeneID:2541181
KEGG:spo:SPBC713.05 OrthoDB:EOG4K9FNP NextBio:20802293
Uniprot:Q9C1X0
Length = 297
Score = 159 (61.0 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 55/220 (25%), Positives = 93/220 (42%)
Query: 152 DGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVW 211
D + + G D FI V+D+ K R+ H + +NT+ + +E ++ SGS DS ++W
Sbjct: 67 DSTKFASCGGDKFIQVWDVNTGKVDRRLGGHLAQINTIRY-NEDSSILASGSFDSKVRLW 125
Query: 212 DRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRK--MSSNTTDN 269
D C + VL + ++ ID ++ D T + +DIRK +SS+ +
Sbjct: 126 D--CRSNSFSPIQVLADAKDSVSSIDIAE--HLIVTGSTDGTLRTYDIRKGTLSSDYFSH 181
Query: 270 SRLRDYDWDYRWMEYPSYARRLKHPHDQS----LATYKGHSVLRTLIRCYFSPEYSTAQK 325
S H DQ L +Y G + +R F+ ++
Sbjct: 182 PITSVKTSKSASFSLISSLNSSIHLLDQETGKILKSYIGLKNMEYRVRSSFNQ----SET 237
Query: 326 YIYTGSSDNSVYIYDLVSGAQVAKLDFHNAP-VRDCCWHP 364
+++GS D VY++DL + Q+ P V D HP
Sbjct: 238 IVFSGSEDGKVYLWDLENETQITSTSVVGTPIVTDISCHP 277
Score = 40 (19.1 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 6/23 (26%), Positives = 15/23 (65%)
Query: 47 QFSNDGSFFVAASQESNIKVYNV 69
+++ G + +AA E ++++NV
Sbjct: 21 KYNRTGKYVLAAGNERVVRLWNV 43
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 168 (64.2 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 43/129 (33%), Positives = 69/129 (53%)
Query: 137 GDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSD-VNTVCFADET 195
G E E I+S+ FS DG+ LV+ D + ++D++A + L + H D V TV F+ +
Sbjct: 386 GHEQE--IYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKLIL--HTDDGVTTVMFSPD- 440
Query: 196 GHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTK 255
G I +GS D + ++W S G L GH E + + DG+Y +S D T K
Sbjct: 441 GQFIAAGSLDKVIRIWT-----SSGTLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIK 495
Query: 256 LWDIRKMSS 264
LW+++ +S+
Sbjct: 496 LWELQCVSN 504
Score = 155 (59.6 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 52/212 (24%), Positives = 100/212 (47%)
Query: 147 VKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSD------VNTVCFADETGHLIF 200
V+FS DG+ L A G + V++++ K + S V +V F+ + G +
Sbjct: 305 VRFSADGKFL-ATGCNRAAMVFNVETGKLITLLQEESSKREGDLYVRSVAFSPD-GKYLA 362
Query: 201 SGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI- 259
+G +D ++WD I++ R +L GH + I +D +DG+ +S D+T LWD+
Sbjct: 363 TGVEDQQIRIWD----IAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVE 418
Query: 260 ---RKMSSNTTDNSRLRDYDWDYRWMEYPSYARRLKHPHDQSLATYKGHSVLRTLIRCYF 316
+K+ +T D + D +++ S + ++ + H ++ F
Sbjct: 419 AGEQKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIWTSSGTLVEQLHGHEESVYSVAF 478
Query: 317 SPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVA 348
SP+ KY+ +GS DN++ +++L + VA
Sbjct: 479 SPD----GKYLVSGSLDNTIKLWELQCVSNVA 506
Score = 138 (53.6 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 54/219 (24%), Positives = 100/219 (45%)
Query: 48 FSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQRFLVYASICA 107
FS DG + ++ I+++++ + ++ + + I S D + LV S
Sbjct: 354 FSPDGKYLATGVEDQQIRIWDIAQK-RVYRLLTGHEQE--IYSLDFSKDGKTLVSGSGDR 410
Query: 108 IVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGS-DNFIY 166
V + DV + ++ + +H D+ G+ +V FS DGQ +AAGS D I
Sbjct: 411 TVCLWDVEAGEQKLI----LHT----------DD-GVTTVMFSPDGQ-FIAAGSLDKVIR 454
Query: 167 VYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFI----SKGRA 222
++ ++ H+ V +V F+ + +L+ SGS D+ K+W+ +C S +
Sbjct: 455 IWTSSGTLVE-QLHGHEESVYSVAFSPDGKYLV-SGSLDNTIKLWELQCVSNVAPSMYKE 512
Query: 223 NGV----LMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
G+ GH + I + DG++ IS KD+T + W
Sbjct: 513 GGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFW 551
Score = 119 (46.9 bits), Expect = 0.00055, P = 0.00055
Identities = 38/192 (19%), Positives = 79/192 (41%)
Query: 70 DKNWKIQKDIETKALRWTITDTSLSPDQRFLVYASICAIVNIVDVGSSARESLANVTIHK 129
+K+W + ++ K ++ + Y A + G + + NV K
Sbjct: 272 EKDWTVTSNVPNKEPPISVQLLHTLEHTSVICYVRFSADGKFLATGCNRAAMVFNVETGK 331
Query: 130 GLDFSADGD---EDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDV 186
+ + E + + SV FS DG+ L D I ++D+ + + H+ ++
Sbjct: 332 LITLLQEESSKREGDLYVRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEI 391
Query: 187 NTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLE-GITFIDSRRDGRYF 245
++ F+ + G + SGS D +WD + G +L H + G+T + DG++
Sbjct: 392 YSLDFSKD-GKTLVSGSGDRTVCLWD----VEAGEQKLIL--HTDDGVTTVMFSPDGQFI 444
Query: 246 ISNGKDQTTKLW 257
+ D+ ++W
Sbjct: 445 AAGSLDKVIRIW 456
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 168 (64.2 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 59/244 (24%), Positives = 104/244 (42%)
Query: 43 VYTSQFSNDGSFFVAASQESNIKVYNV-DKNWKIQKDIETKALRWTITDTSLSPDQRFLV 101
+ + FS DG + +++S + +K++ + DK + W + +SPD R +
Sbjct: 134 IRSMSFSADGGYLLSSSDDKTLKLWRLQDKKFMCSF---AGHKNW-VRSGVISPDMRLVA 189
Query: 102 YASICAIVNIVDVGSSARESLANVTIHKGLDFSA-DGDEDEFGIFS-VKFSTDGQELVAA 159
S V + D+ S + T+ + S + D S V F DG L+++
Sbjct: 190 SGSDDKTVMLWDLNFQKIVSKYS-TLDDNVKISQINSYSDHMDTVSQVLFHPDGTCLISS 248
Query: 160 GSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISK 219
D+ I + D+++NK AH + VN++ TG+ + S DS K+WD R +
Sbjct: 249 SFDHKIKITDIRSNKLIQHYNAHDAQVNSISI-HPTGYFLASAGSDSKIKIWDLR----Q 303
Query: 220 GRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW----DIRKMSSNTTDNSRLRDY 275
GR L + + IT + + G YF + G +W D + S +R
Sbjct: 304 GRQIYTLYSNDKDITTVQFNQSGDYFATGGSQNLCMVWKTNFDQNIQNIEQVQRSTVRQN 363
Query: 276 DWDY 279
D +Y
Sbjct: 364 DVEY 367
Score = 137 (53.3 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 66/234 (28%), Positives = 110/234 (47%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVY-DLQANKCSLRIPAHKSDVNTVCFADETGHLIFSG 202
++ VK+S DG+ + + G D I ++ + +KCS+ I AH + ++ F+ + G+L+ S
Sbjct: 92 VYCVKYSPDGETIASCGQDRQIRLWQNTVQSKCSI-IKAHCGAIRSMSFSADGGYLL-SS 149
Query: 203 SDDSLCKVW---DRRCFIS-KGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWD 258
SDD K+W D++ S G N V G + D R S D+T LWD
Sbjct: 150 SDDKTLKLWRLQDKKFMCSFAGHKNWVRSGVISP--------DMRLVASGSDDKTVMLWD 201
Query: 259 I--RKMSS--NTTDN----SRLRDYDWDYRWMEYPSYARRLKHPHDQSLATYK-GHSV-- 307
+ +K+ S +T D+ S++ Y D+ M+ S L HP L + H +
Sbjct: 202 LNFQKIVSKYSTLDDNVKISQINSYS-DH--MDTVSQV--LFHPDGTCLISSSFDHKIKI 256
Query: 308 --LRT--LIRCYFSPEYSTAQKYIY-TG------SSDNSVYIYDLVSGAQVAKL 350
+R+ LI+ Y + + I+ TG SD+ + I+DL G Q+ L
Sbjct: 257 TDIRSNKLIQHYNAHDAQVNSISIHPTGYFLASAGSDSKIKIWDLRQGRQIYTL 310
>UNIPROTKB|Q68DS0 [details] [associations]
symbol:DKFZp781N011 "Putative uncharacterized protein
DKFZp781N011" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AL627424 EMBL:AL133387 EMBL:AL445463
RefSeq:NP_003930.1 RefSeq:NP_378663.1 UniGene:Hs.643802
UniGene:Hs.713753 GeneID:8945 KEGG:hsa:8945 CTD:8945 HGNC:HGNC:1144
HOVERGEN:HBG002521 KO:K03362 ChiTaRS:BTRC GenomeRNAi:8945
EMBL:CR749295 IPI:IPI01012795 RefSeq:NP_001243785.1 SMR:Q68DS0
STRING:Q68DS0 Ensembl:ENST00000393441 Uniprot:Q68DS0
Length = 564
Score = 167 (63.8 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 61/255 (23%), Positives = 118/255 (46%)
Query: 139 EDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFA-DETGH 197
E G++ +++ D Q++V+ DN I ++D +C + H V +C DE
Sbjct: 260 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSV--LCLQYDE--R 313
Query: 198 LIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
+I +GS DS +VWD ++ G L+ H E + + R + ++ KD++ +W
Sbjct: 314 VIITGSSDSTVRVWD----VNTGEMLNTLIHHCEAVLHL--RFNNGMMVTCSKDRSIAVW 367
Query: 258 DIRKMSSNTT------DNSRLRDYDWDYRWMEYPSYARRLKHPHDQS---LATYKGHSVL 308
D+ + T + + D+D +++ S R +K + + + T GH
Sbjct: 368 DMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGH--- 424
Query: 309 RTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPM 368
+ I C +Y + + +GSSDN++ ++D+ GA + L+ H VR C
Sbjct: 425 KRGIACL---QYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR--CIRFDNKR 477
Query: 369 LISSSWDCNIVRWEI 383
++S ++D I W++
Sbjct: 478 IVSGAYDGKIKVWDL 492
>UNIPROTKB|F1MVN1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:DAAA02058986 EMBL:DAAA02058987
EMBL:DAAA02058988 EMBL:DAAA02058989 EMBL:DAAA02058990
EMBL:DAAA02058991 IPI:IPI00717164 UniGene:Bt.25271
Ensembl:ENSBTAT00000009830 Uniprot:F1MVN1
Length = 569
Score = 167 (63.8 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 61/255 (23%), Positives = 118/255 (46%)
Query: 139 EDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFA-DETGH 197
E G++ +++ D Q++V+ DN I ++D +C + H V +C DE
Sbjct: 265 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSV--LCLQYDE--R 318
Query: 198 LIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
+I +GS DS +VWD ++ G L+ H E + + R + ++ KD++ +W
Sbjct: 319 VIITGSSDSTVRVWD----VNTGEMLNTLIHHCEAVLHL--RFNNGMMVTCSKDRSIAVW 372
Query: 258 DIRKMSSNTT------DNSRLRDYDWDYRWMEYPSYARRLKHPHDQS---LATYKGHSVL 308
D+ + T + + D+D +++ S R +K + + + T GH
Sbjct: 373 DMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGH--- 429
Query: 309 RTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPM 368
+ I C +Y + + +GSSDN++ ++D+ GA + L+ H VR C
Sbjct: 430 KRGIACL---QYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR--CIRFDNKR 482
Query: 369 LISSSWDCNIVRWEI 383
++S ++D I W++
Sbjct: 483 IVSGAYDGKIKVWDL 497
>UNIPROTKB|E1BVN5 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
CTD:5356 GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK
EMBL:AADN02016546 IPI:IPI00576149 RefSeq:XP_420368.2
UniGene:Gga.9982 ProteinModelPortal:E1BVN5
Ensembl:ENSGALT00000015067 GeneID:422401 KEGG:gga:422401
NextBio:20825038 Uniprot:E1BVN5
Length = 516
Score = 110 (43.8 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 29/111 (26%), Positives = 49/111 (44%)
Query: 154 QELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDR 213
Q V +D I ++DL + K L + H S V V + + +L FS +D K WD
Sbjct: 219 QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSARSPYL-FSCGEDKQVKCWD- 276
Query: 214 RCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSS 264
+ + GHL + +D ++ +D T ++WD+R +S
Sbjct: 277 ---LEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKAS 324
Score = 103 (41.3 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 27/87 (31%), Positives = 41/87 (47%)
Query: 298 SLATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPV 357
S+ T GH+ ++C A+ + TGS D ++ ++DLV+G L H V
Sbjct: 324 SVHTLSGHTNAVATVKC------QAAEPQVVTGSHDTTIRLWDLVAGKTRVTLTNHKKSV 377
Query: 358 RDCCWHPIYPMLISSSWDCNIVRWEIP 384
R HP + S S D NI +W+ P
Sbjct: 378 RAVILHPRHYTFASGSPD-NIKQWKFP 403
>UNIPROTKB|F1NYG1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006470
"protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0042753 OMA:NAYLKPM GeneTree:ENSGT00690000101849
EMBL:AADN02046404 IPI:IPI00684527 Ensembl:ENSGALT00000033197
Uniprot:F1NYG1
Length = 605
Score = 167 (63.8 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 61/255 (23%), Positives = 118/255 (46%)
Query: 139 EDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFA-DETGH 197
E G++ +++ D Q++V+ DN I ++D +C + H V +C DE
Sbjct: 301 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSV--LCLQYDE--R 354
Query: 198 LIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
+I +GS DS +VWD ++ G L+ H E + + R + ++ KD++ +W
Sbjct: 355 VIITGSSDSTVRVWD----VNAGEMLNTLIHHCEAVLHL--RFNNGMMVTCSKDRSIAVW 408
Query: 258 DIRKMSSNTT------DNSRLRDYDWDYRWMEYPSYARRLKHPHDQS---LATYKGHSVL 308
D+ + T + + D+D +++ S R +K + + + T GH
Sbjct: 409 DMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGH--- 465
Query: 309 RTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPM 368
+ I C +Y + + +GSSDN++ ++D+ GA + L+ H VR C
Sbjct: 466 KRGIACL---QYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR--CIRFDNKR 518
Query: 369 LISSSWDCNIVRWEI 383
++S ++D I W++
Sbjct: 519 IVSGAYDGKIKVWDL 533
>UNIPROTKB|E2RDC4 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=IEA] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945 KO:K03362
OMA:NAYLKPM GeneTree:ENSGT00690000101849 EMBL:AAEX03015480
EMBL:AAEX03015479 RefSeq:XP_543980.3 ProteinModelPortal:E2RDC4
Ensembl:ENSCAFT00000015696 GeneID:486851 KEGG:cfa:486851
NextBio:20860562 Uniprot:E2RDC4
Length = 605
Score = 167 (63.8 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 61/255 (23%), Positives = 118/255 (46%)
Query: 139 EDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFA-DETGH 197
E G++ +++ D Q++V+ DN I ++D +C + H V +C DE
Sbjct: 301 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSV--LCLQYDE--R 354
Query: 198 LIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
+I +GS DS +VWD ++ G L+ H E + + R + ++ KD++ +W
Sbjct: 355 VIITGSSDSTVRVWD----VNTGEMLNTLIHHCEAVLHL--RFNNGMMVTCSKDRSIAVW 408
Query: 258 DIRKMSSNTT------DNSRLRDYDWDYRWMEYPSYARRLKHPHDQS---LATYKGHSVL 308
D+ + T + + D+D +++ S R +K + + + T GH
Sbjct: 409 DMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGH--- 465
Query: 309 RTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPM 368
+ I C +Y + + +GSSDN++ ++D+ GA + L+ H VR C
Sbjct: 466 KRGIACL---QYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR--CIRFDNKR 518
Query: 369 LISSSWDCNIVRWEI 383
++S ++D I W++
Sbjct: 519 IVSGAYDGKIKVWDL 533
>UNIPROTKB|Q9Y297 [details] [associations]
symbol:BTRC "F-box/WD repeat-containing protein 1A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0033598
"mammary gland epithelial cell proliferation" evidence=IEA]
[GO:0042753 "positive regulation of circadian rhythm" evidence=IEA]
[GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0031648 "protein destabilization" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0045862 "positive
regulation of proteolysis" evidence=IMP] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=TAS] [GO:0051437 "positive regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=TAS] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0045892 Reactome:REACT_115566 GO:GO:0019048 GO:GO:0007165
GO:GO:0045893 GO:GO:0016032 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016874 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0016567
GO:GO:0051726 GO:GO:0043433 GO:GO:0019005 GO:GO:0045862
GO:GO:0000209 GO:GO:0031145 GO:GO:0051437 GO:GO:0071407
Reactome:REACT_24941 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0045879 GO:GO:0042753 PDB:1P22
PDBsum:1P22 EMBL:AL627424 EMBL:AF101784 EMBL:Y14153 EMBL:AF129530
EMBL:GU727631 EMBL:AK313353 EMBL:AL133387 EMBL:AL445463
EMBL:BC027994 IPI:IPI00307418 IPI:IPI00413142 RefSeq:NP_003930.1
RefSeq:NP_378663.1 UniGene:Hs.643802 UniGene:Hs.713753 PDB:2P64
PDBsum:2P64 ProteinModelPortal:Q9Y297 SMR:Q9Y297 DIP:DIP-31607N
IntAct:Q9Y297 MINT:MINT-108636 STRING:Q9Y297 PhosphoSite:Q9Y297
DMDM:13124271 PRIDE:Q9Y297 DNASU:8945 Ensembl:ENST00000370187
Ensembl:ENST00000408038 GeneID:8945 KEGG:hsa:8945 UCSC:uc001kta.3
UCSC:uc001ktb.3 CTD:8945 GeneCards:GC10P103103 HGNC:HGNC:1144
HPA:CAB032986 MIM:603482 neXtProt:NX_Q9Y297 PharmGKB:PA25465
HOGENOM:HOG000006638 HOVERGEN:HBG002521 InParanoid:Q9Y297 KO:K03362
OMA:NAYLKPM OrthoDB:EOG4F1X2M PhylomeDB:Q9Y297 ChiTaRS:BTRC
EvolutionaryTrace:Q9Y297 GenomeRNAi:8945 NextBio:33645
ArrayExpress:Q9Y297 Bgee:Q9Y297 CleanEx:HS_BTRC
Genevestigator:Q9Y297 Uniprot:Q9Y297
Length = 605
Score = 167 (63.8 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 61/255 (23%), Positives = 118/255 (46%)
Query: 139 EDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFA-DETGH 197
E G++ +++ D Q++V+ DN I ++D +C + H V +C DE
Sbjct: 301 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSV--LCLQYDE--R 354
Query: 198 LIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
+I +GS DS +VWD ++ G L+ H E + + R + ++ KD++ +W
Sbjct: 355 VIITGSSDSTVRVWD----VNTGEMLNTLIHHCEAVLHL--RFNNGMMVTCSKDRSIAVW 408
Query: 258 DIRKMSSNTT------DNSRLRDYDWDYRWMEYPSYARRLKHPHDQS---LATYKGHSVL 308
D+ + T + + D+D +++ S R +K + + + T GH
Sbjct: 409 DMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGH--- 465
Query: 309 RTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPM 368
+ I C +Y + + +GSSDN++ ++D+ GA + L+ H VR C
Sbjct: 466 KRGIACL---QYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR--CIRFDNKR 518
Query: 369 LISSSWDCNIVRWEI 383
++S ++D I W++
Sbjct: 519 IVSGAYDGKIKVWDL 533
>MGI|MGI:1338871 [details] [associations]
symbol:Btrc "beta-transducin repeat containing protein"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008013 "beta-catenin binding"
evidence=IDA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0031648
"protein destabilization" evidence=ISO] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IMP]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IDA] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IMP] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IMP] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IDA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
UniPathway:UPA00143 MGI:MGI:1338871 GO:GO:0005829 GO:GO:0005634
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH466534 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511
GO:GO:0019005 GO:GO:0004842 GO:GO:0045862 GO:GO:0008013
GO:GO:0000209 GO:GO:0071407 GO:GO:0045309 Reactome:REACT_109335
Reactome:REACT_24972 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OMA:NAYLKPM
OrthoDB:EOG4F1X2M EMBL:AF099932 EMBL:AF110396 EMBL:AF112979
EMBL:AF081887 EMBL:AF391190 EMBL:AF391178 EMBL:AF391179
EMBL:AF391180 EMBL:AF391181 EMBL:AF391182 EMBL:AF391183
EMBL:AF391184 EMBL:AF391185 EMBL:AF391186 EMBL:AF391187
EMBL:AF391188 EMBL:AF391189 EMBL:AK145624 EMBL:AK156660
EMBL:AK220183 EMBL:BC003989 IPI:IPI00402788 IPI:IPI00877195
RefSeq:NP_001032847.2 RefSeq:NP_033901.1 UniGene:Mm.119717
UniGene:Mm.446448 HSSP:Q9Y297 ProteinModelPortal:Q3ULA2 SMR:Q3ULA2
IntAct:Q3ULA2 STRING:Q3ULA2 PhosphoSite:Q3ULA2
Ensembl:ENSMUST00000065601 Ensembl:ENSMUST00000111936 GeneID:12234
KEGG:mmu:12234 UCSC:uc008hqy.2 UCSC:uc008hqz.2
GeneTree:ENSGT00690000101849 InParanoid:Q571K6 NextBio:280656
Bgee:Q3ULA2 Genevestigator:Q3ULA2 Uniprot:Q3ULA2
Length = 605
Score = 167 (63.8 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 61/255 (23%), Positives = 118/255 (46%)
Query: 139 EDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFA-DETGH 197
E G++ +++ D Q++V+ DN I ++D +C + H V +C DE
Sbjct: 301 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSV--LCLQYDE--R 354
Query: 198 LIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
+I +GS DS +VWD ++ G L+ H E + + R + ++ KD++ +W
Sbjct: 355 VIITGSSDSTVRVWD----VNAGEMLNTLIHHCEAVLHL--RFNNGMMVTCSKDRSIAVW 408
Query: 258 DIRKMSSNTT------DNSRLRDYDWDYRWMEYPSYARRLKHPHDQS---LATYKGHSVL 308
D+ + T + + D+D +++ S R +K + + + T GH
Sbjct: 409 DMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGH--- 465
Query: 309 RTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPM 368
+ I C +Y + + +GSSDN++ ++D+ GA + L+ H VR C
Sbjct: 466 KRGIACL---QYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR--CIRFDNKR 518
Query: 369 LISSSWDCNIVRWEI 383
++S ++D I W++
Sbjct: 519 IVSGAYDGKIKVWDL 533
>UNIPROTKB|F1LMH8 [details] [associations]
symbol:Btrc "Protein Btrc" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 GeneTree:ENSGT00690000101849 IPI:IPI00372531
PRIDE:F1LMH8 Ensembl:ENSRNOT00000022426 ArrayExpress:F1LMH8
Uniprot:F1LMH8
Length = 605
Score = 167 (63.8 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 61/255 (23%), Positives = 118/255 (46%)
Query: 139 EDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFA-DETGH 197
E G++ +++ D Q++V+ DN I ++D +C + H V +C DE
Sbjct: 301 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSV--LCLQYDE--R 354
Query: 198 LIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
+I +GS DS +VWD ++ G L+ H E + + R + ++ KD++ +W
Sbjct: 355 VIITGSSDSTVRVWD----VNAGEMLNTLIHHCEAVLHL--RFNNGMMVTCSKDRSIAVW 408
Query: 258 DIRKMSSNTT------DNSRLRDYDWDYRWMEYPSYARRLKHPHDQS---LATYKGHSVL 308
D+ + T + + D+D +++ S R +K + + + T GH
Sbjct: 409 DMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGH--- 465
Query: 309 RTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPM 368
+ I C +Y + + +GSSDN++ ++D+ GA + L+ H VR C
Sbjct: 466 KRGIACL---QYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR--CIRFDNKR 518
Query: 369 LISSSWDCNIVRWEI 383
++S ++D I W++
Sbjct: 519 IVSGAYDGKIKVWDL 533
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 168 (64.2 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 67/252 (26%), Positives = 110/252 (43%)
Query: 143 GIFSVKFSTDGQELVAAG-SDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFS 201
G+ +V F TD L+A G +D+ + V+ + K LR +D+N LI
Sbjct: 428 GLTAVDF-TDDSSLIAGGFADSTVRVWSVTPKK--LRKVKSAADLN----------LIDK 474
Query: 202 GSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRK 261
SDD L ++ D + S+ + +L GH + + D Y +S+ +D T +LW ++
Sbjct: 475 ESDDVLERIMDEKTS-SESK---ILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQT 530
Query: 262 MSSNTTDNSRLRDYD-WDYRWMEYPSY---------ARRLKHPHDQSLATYKGHSVLRTL 311
+ + +Y WD ++ + Y AR H Q L + GH T
Sbjct: 531 FTCLV--GYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTC 588
Query: 312 IRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLIS 371
R F P Y+ TGSSD +V ++D+++G V H P+ + P L S
Sbjct: 589 TR--FHPN----SNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLAS 642
Query: 372 SSWDCNIVRWEI 383
S D ++ W+I
Sbjct: 643 GSTDGRVLLWDI 654
Score = 127 (49.8 bits), Expect = 0.00010, P = 0.00010
Identities = 33/123 (26%), Positives = 52/123 (42%)
Query: 148 KFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSL 207
+F + + SD + ++D+ C HK ++++ F+ G + SGS D
Sbjct: 590 RFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPN-GKFLASGSTDGR 648
Query: 208 CKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI-RKMSSNT 266
+WD I G L GH I + RDG S D T +LWD+ R +
Sbjct: 649 VLLWD----IGHGLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWDVMRAIDDVE 704
Query: 267 TDN 269
TD+
Sbjct: 705 TDD 707
Score = 118 (46.6 bits), Expect = 0.00097, P = 0.00097
Identities = 47/218 (21%), Positives = 93/218 (42%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
++ V FS D L+++ D I ++ LQ C + H V F+ G+ SG
Sbjct: 502 VYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSP-FGYYFVSGG 560
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMS 263
D + ++W + + + GHL +T + Y + D+T +LWD+ ++
Sbjct: 561 HDRVARLWATDHY----QPLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDV--LN 614
Query: 264 SN-----TTDNSRLRD--YDWDYRWMEYPSYARRL---KHPHDQSLATYKGHSVLRTLIR 313
N T + + + +++ S R+ H +A KGH+ T+
Sbjct: 615 GNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHT--GTI-- 670
Query: 314 CYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLD 351
++ ++S + I +GS DN+V ++D++ + D
Sbjct: 671 --YALKFSRDGEIIASGSIDNTVRLWDVMRAIDDVETD 706
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 153 (58.9 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 62/247 (25%), Positives = 106/247 (42%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
+ S++FS G L +A D + ++ L S AH + V +V F+ + G + + S
Sbjct: 63 VTSLQFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSAD-GQFLVTAS 121
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI--RK 261
+D KVW + + R L H + DGR +S +D+T K+WD ++
Sbjct: 122 EDKSIKVWS----MYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQ 177
Query: 262 MSSNTTDNSRLRDY-DWDYRWMEYPS----YARRLKHPH-DQSLATYKGHSVLRTLIRCY 315
+N +D+ ++ D+ S +A R+ ++ L Y+ HS + C
Sbjct: 178 CVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCG---VNCL 234
Query: 316 -FSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSW 374
F P ++ + T SSD +V I DLV G + L H PV + + S
Sbjct: 235 SFHPSGNS----LVTASSDGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGA 290
Query: 375 DCNIVRW 381
D ++ W
Sbjct: 291 DAQVLVW 297
Score = 138 (53.6 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 46/172 (26%), Positives = 77/172 (44%)
Query: 86 WTITDTSLSPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIF 145
W + SPD R +V S + I D +++++ + N FS D F F
Sbjct: 146 W-VRCAKFSPDGRLIVSCSEDKTIKIWD--TTSKQCVNN--------FS---DSVGFANF 191
Query: 146 SVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDD 205
V FS +G + +AGSD+ + ++D++ N+ H VN + F +G+ + + S D
Sbjct: 192 -VDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSF-HPSGNSLVTASSD 249
Query: 206 SLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
K+ D + +GR L GH + + +DG F S G D +W
Sbjct: 250 GTVKILD----LVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLVW 297
Score = 131 (51.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 56/242 (23%), Positives = 107/242 (44%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
I S FS + +++ A D F+ ++ L+ + + R HK V ++ F+ + G+L+ S S
Sbjct: 21 ITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQ-GNLLASAS 79
Query: 204 DDSLCKVW--DRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI-- 259
D ++W DR KG+++ H + +D DG++ ++ +D++ K+W +
Sbjct: 80 RDKTVRLWVLDR-----KGKSSE-FKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSMYR 133
Query: 260 -RKMSS--NTTDNSRLRDYDWDYRWMEYPSYARRLK---HPHDQSLATYKGHSVLRTLIR 313
R + S T R + D R + S + +K Q + + +
Sbjct: 134 QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANFVD 193
Query: 314 CYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSS 373
FSP T I + SD++V I+D+ + H+ V +HP L+++S
Sbjct: 194 --FSPN-GTC---IASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTAS 247
Query: 374 WD 375
D
Sbjct: 248 SD 249
Score = 71 (30.1 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 43 VYTS-QFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQRFLV 101
V TS QFS G+ +AS++ ++++ +D+ K E KA + S D +FLV
Sbjct: 62 VVTSLQFSPQGNLLASASRDKTVRLWVLDRKGKSS---EFKAHTAPVRSVDFSADGQFLV 118
Query: 102 YAS 104
AS
Sbjct: 119 TAS 121
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 161 (61.7 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 80/303 (26%), Positives = 142/303 (46%)
Query: 56 VAASQESNIKVYNVDKNWKIQKDIET--KALRW---TITDTSLSPDQRFLVYASICAIVN 110
V+AS++ + V+N++ + +I T K+L I D S+S D F + S V
Sbjct: 39 VSASRDKKLIVWNINTD-DDSGEIGTAKKSLTGHSQAINDVSISSDGLFALSGSWDHSVR 97
Query: 111 IVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDL 170
+ D+ SL TI + ++D +FSV FS D +++V+A D I +++
Sbjct: 98 LWDL------SLGE-TIRSFIGHTSD-------VFSVSFSPDNRQIVSASRDKTIKLWNT 143
Query: 171 QAN-KCSLRIPAHKSDVNTVCFADETGH-LIFSGSDDSLCKVWD-RRCFISKGRANGVLM 227
A K ++ H + V F+ +I S D L KVW+ + C ++K L
Sbjct: 144 LAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKN-----LE 198
Query: 228 GHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRK------MSSNTTDNSRLRDYDWDYRW 281
GH + + DG S GKD KLWD+++ + + +T NS L DY W
Sbjct: 199 GHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETGSTINS-LCFSPCDY-W 256
Query: 282 MEYPSYARRLKHPHDQS-LATYKGHSVLRTLIRCYF--SPEYSTAQKYIYTGSSDNSVYI 338
+ + R ++ + +S L + + V ++ I + S +S + +Y GS+D ++Y+
Sbjct: 257 L-CAATDRFIRIWNLESKLIISEIYPVKQSKIGVPWCTSLTWSANGQLLYCGSTDGNIYV 315
Query: 339 YDL 341
Y++
Sbjct: 316 YEV 318
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 161 (61.7 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 80/303 (26%), Positives = 142/303 (46%)
Query: 56 VAASQESNIKVYNVDKNWKIQKDIET--KALRW---TITDTSLSPDQRFLVYASICAIVN 110
V+AS++ + V+N++ + +I T K+L I D S+S D F + S V
Sbjct: 39 VSASRDKKLIVWNINTD-DDSGEIGTAKKSLTGHSQAINDVSISSDGLFALSGSWDHSVR 97
Query: 111 IVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDL 170
+ D+ SL TI + ++D +FSV FS D +++V+A D I +++
Sbjct: 98 LWDL------SLGE-TIRSFIGHTSD-------VFSVSFSPDNRQIVSASRDKTIKLWNT 143
Query: 171 QAN-KCSLRIPAHKSDVNTVCFADETGH-LIFSGSDDSLCKVWD-RRCFISKGRANGVLM 227
A K ++ H + V F+ +I S D L KVW+ + C ++K L
Sbjct: 144 LAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKN-----LE 198
Query: 228 GHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRK------MSSNTTDNSRLRDYDWDYRW 281
GH + + DG S GKD KLWD+++ + + +T NS L DY W
Sbjct: 199 GHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETGSTINS-LCFSPCDY-W 256
Query: 282 MEYPSYARRLKHPHDQS-LATYKGHSVLRTLIRCYF--SPEYSTAQKYIYTGSSDNSVYI 338
+ + R ++ + +S L + + V ++ I + S +S + +Y GS+D ++Y+
Sbjct: 257 L-CAATDRFIRIWNLESKLIISEIYPVKQSKIGVPWCTSLTWSANGQLLYCGSTDGNIYV 315
Query: 339 YDL 341
Y++
Sbjct: 316 YEV 318
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 152 (58.6 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 49/174 (28%), Positives = 76/174 (43%)
Query: 84 LRWTITDTSLSPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFG 143
+ W + SPD R +V AS V + D S+RE + + H G
Sbjct: 107 INW-VRCAKFSPDGRLIVSASDDKTVKLWD--KSSRECVHSYCEHGGF------------ 151
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
+ V F G + AAG DN + V+D++ ++ H + VN + F +G+ + + S
Sbjct: 152 VTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSF-HPSGNYLITAS 210
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
DS K+ D + +GR L GH T + R G YF S G D+ +W
Sbjct: 211 SDSTLKILD----LMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 260
Score = 142 (55.0 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 38/118 (32%), Positives = 52/118 (44%)
Query: 146 SVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDD 205
SV F +DGQ V A D + V+ K + H + V F+ + G LI S SDD
Sbjct: 70 SVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPD-GRLIVSASDD 128
Query: 206 SLCKVWD---RRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
K+WD R C S G +T++D G + G D T K+WD+R
Sbjct: 129 KTVKLWDKSSRECVHSYCEHGGF-------VTYVDFHPSGTCIAAAGMDNTVKVWDVR 179
Score = 132 (51.5 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 53/225 (23%), Positives = 93/225 (41%)
Query: 162 DNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGR 221
D+ + V+ ++ + R HK V V F+ +GHL+ SGS D ++W KG
Sbjct: 2 DSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSP-SGHLLASGSRDKTVRIWVPNV---KGE 57
Query: 222 ANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMS-----SNTTDNSRLRDYD 276
+ V H + + DG+ F++ D+T K+W + S + R +
Sbjct: 58 ST-VFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFS 116
Query: 277 WDYRWMEYPSYARRLK---HPHDQSLATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSD 333
D R + S + +K + + +Y H T + F P T I D
Sbjct: 117 PDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVD--FHPS-GTC---IAAAGMD 170
Query: 334 NSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNI 378
N+V ++D+ + + H+A V +HP LI++S D +
Sbjct: 171 NTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTL 215
Score = 50 (22.7 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 10/49 (20%), Positives = 22/49 (44%)
Query: 19 DSCHVLSRYLPVNGPWKVDGMNSRVYTSQFSNDGSFFVAASQESNIKVY 67
DSC ++ P + ++ G V FS G + S++ ++++
Sbjct: 2 DSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIW 50
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 108 (43.1 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 30/109 (27%), Positives = 49/109 (44%)
Query: 153 GQELVAAGS-DNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVW 211
G E A G+ D I ++DL + K L + H S V V + + +L FS +D K W
Sbjct: 183 GNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAVSTKHPYL-FSCGEDRQVKCW 241
Query: 212 DRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
D + + GHL + + ++G+D T ++WD+R
Sbjct: 242 D----LEYNKVIRHYHGHLSAVYSLALHPTIDVLATSGRDSTARIWDMR 286
Score = 102 (41.0 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 24/58 (41%), Positives = 31/58 (53%)
Query: 327 IYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWEIP 384
I TGS D++V ++DL +G V L H VR HP M S+S D NI +W P
Sbjct: 313 IITGSHDSTVRLWDLAAGKSVCTLTNHKKSVRSIVLHPSLYMFASASPD-NIKQWRCP 369
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 144 (55.7 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 53/229 (23%), Positives = 110/229 (48%)
Query: 133 FSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFA 192
FS DED++ + ++ ++D ++L+AA + +Y++ + + + AH++ V T+
Sbjct: 54 FSIKKDEDDY-VTALAITSDSKKLIAAFRSRLLTIYEIPSGRRIKSMKAHETPVITMTI- 111
Query: 193 DETGHLIFSGSDDSLCKVWD-RRCFISKG-RANGVLMGHLEGITFIDSRRDGRYFISNGK 250
D T L+ +G + L KVWD +++ R +G G + + F + + +++G
Sbjct: 112 DPTNTLLATGGAEGLVKVWDIAGAYVTHSFRGHG---GVISALCF--GKHQNTWVLASGA 166
Query: 251 DQT-TKLWDI---RKMSSNTTDNSRLRDYDWDYRWMEYPSYARRLKHPHDQSLATY--KG 304
D + +LWD+ R M+ +S +R ++ P+ + L D+++ + K
Sbjct: 167 DDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFE------PTGSFLLSGSRDKTVQVWNIKK 220
Query: 305 HSVLRTLIRCYFSPEY------STAQKYIYTGSSDNSVYIYDLVSGAQV 347
S +RT I + S E +K +YT N + +D SG+++
Sbjct: 221 RSAVRT-IPVFHSVEAIGWVNGQPEEKILYTAGEGNLILAWDWKSGSRL 268
Score = 110 (43.8 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 59/257 (22%), Positives = 99/257 (38%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQAN----KCSLRIPAHKSDVNTVCFA--DETGH 197
+ ++ S DG L DN + +++L KC H + V V D G+
Sbjct: 367 VLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALGPLDVNGY 426
Query: 198 LIF--SGSDDSLCKVWDRRCFISKG----RANGVLMGHLEGITFIDSRRDGRYFISNGKD 251
F S S D K ++ ++K RA + H + I +DGR S +D
Sbjct: 427 PTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKAHDRDVNAIQVSKDGRIIASASQD 486
Query: 252 QTTKLWDIRKMSSNTTDNSRLRDYDWDYRWMEYPSYARRLKHPH-DQSLATYK--GHSVL 308
+T KLWD SS LR + + ++R+L D+++ + +
Sbjct: 487 KTIKLWD----SSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDTQQCV 542
Query: 309 RTL---IRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPI 365
+TL Y + + + ++D V ++ L SG VA LD H V
Sbjct: 543 QTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGECVATLDNHEDRVWALASRFD 602
Query: 366 YPMLISSSWDCNIVRWE 382
+L+S D + W+
Sbjct: 603 GSLLVSGGADAVVSVWK 619
Score = 68 (29.0 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 17/59 (28%), Positives = 27/59 (45%)
Query: 325 KYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWEI 383
+ I + S D ++ ++D +G V L H V C ++P L S S D I W +
Sbjct: 478 RIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNV 536
Score = 55 (24.4 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 10/35 (28%), Positives = 21/35 (60%)
Query: 37 DGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDK 71
+G +S + F GSF ++ S++ ++V+N+ K
Sbjct: 186 EGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKK 220
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 138 (53.6 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 56/232 (24%), Positives = 97/232 (41%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQ 97
G + V + +G V+AS++ IK++ V + ++ T W + P+Q
Sbjct: 125 GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF--TGHREWV---RMVRPNQ 179
Query: 98 RFLVYASICAIVNIVDVGSSA-RESLANVTIHKGL--------DFSADGDEDEFGIFSVK 148
+ AS C+ V V A +E A + H+ + + S + G + K
Sbjct: 180 DGTLIAS-CSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKK 238
Query: 149 FSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLC 208
G L++ D I ++D+ C + + H + V V F G I S +DD
Sbjct: 239 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLF-HSGGKFILSCADDKTL 297
Query: 209 KVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
+VWD + +K R L H +T +D + Y ++ DQT K+W+ R
Sbjct: 298 RVWDYK---NK-RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 345
Score = 126 (49.4 bits), Expect = 5.9e-09, Sum P(3) = 5.9e-09
Identities = 34/144 (23%), Positives = 63/144 (43%)
Query: 116 SSARESLANVTIHKGLDF--SADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQAN 173
S++ ++ V ++ DF + G D + + F G+ L + +D I ++D Q
Sbjct: 60 SASEDATIKVWDYETGDFERTLKGHTDS--VQDISFDHSGKLLASCSADMTIKLWDFQGF 117
Query: 174 KCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGI 233
+C + H +V++V H++ S S D K+W+ + G GH E +
Sbjct: 118 ECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWE----VQTGYCVKTFTGHREWV 172
Query: 234 TFIDSRRDGRYFISNGKDQTTKLW 257
+ +DG S DQT ++W
Sbjct: 173 RMVRPNQDGTLIASCSNDQTVRVW 196
Score = 115 (45.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 27/105 (25%), Positives = 50/105 (47%)
Query: 156 LVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRC 215
+V+A D I V+D + + H V + F D +G L+ S S D K+WD +
Sbjct: 58 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWDFQG 116
Query: 216 FISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
F + GH ++ + +G + +S +D+T K+W+++
Sbjct: 117 F----ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 157
Score = 73 (30.8 bits), Expect = 5.9e-09, Sum P(3) = 5.9e-09
Identities = 27/109 (24%), Positives = 53/109 (48%)
Query: 238 SRRDGRYFISNGKDQTTKLWDIRKMSSNTTDNSRLRDYDWDYRWMEYPSYARR-LKHPHD 296
S + G + +S +D+T K+WD+ S+ + + +W R + + S + L D
Sbjct: 239 SGKPGPFLLSGSRDKTIKMWDV---STGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADD 294
Query: 297 QSLAT--YKGHSVLRTL-IRCYF--SPEYSTAQKYIYTGSSDNSVYIYD 340
++L YK ++TL +F S ++ Y+ TGS D +V +++
Sbjct: 295 KTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 343
Score = 57 (25.1 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 13/63 (20%), Positives = 30/63 (47%)
Query: 320 YSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIV 379
+ + K+I + + D ++ ++D + + L+ H V +H P +++ S D +
Sbjct: 281 FHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 340
Query: 380 RWE 382
WE
Sbjct: 341 VWE 343
Score = 55 (24.4 bits), Expect = 3.7e-07, Sum P(3) = 3.7e-07
Identities = 13/57 (22%), Positives = 30/57 (52%)
Query: 326 YIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWE 382
++ +GS D ++ ++D+ +G + L H+ VR +H ++S + D + W+
Sbjct: 245 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 301
Score = 39 (18.8 bits), Expect = 5.9e-09, Sum P(3) = 5.9e-09
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 34 WKVDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVD 70
+ + G S V F S V+AS+++ IKV++ +
Sbjct: 37 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYE 73
Score = 38 (18.4 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 367 PMLISSSWDCNIVRWEI 383
P L+S S D I W++
Sbjct: 244 PFLLSGSRDKTIKMWDV 260
>DICTYBASE|DDB_G0277471 [details] [associations]
symbol:DDB_G0277471 "putative proteasomal
ATPase-associated factor" species:44689 "Dictyostelium discoideum"
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0277471
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000020 GO:GO:0000502 KO:K11887
RefSeq:XP_642666.1 ProteinModelPortal:Q8MYE8
EnsemblProtists:DDB0169267 GeneID:8621083 KEGG:ddi:DDB_G0277471
OMA:IHHIKAN ProtClustDB:CLSZ2729134 Uniprot:Q8MYE8
Length = 425
Score = 152 (58.6 bits), Expect = 6.2e-09, Sum P(2) = 6.2e-09
Identities = 44/130 (33%), Positives = 63/130 (48%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
I S+ S G+ V +D + V++ + ++ H DV+ F +G +I SGS
Sbjct: 106 ITSMGVSHLGELGVYGSTDGTLEVFETGDGQIRRKLDGHVGDVDLAMFFP-SGRVILSGS 164
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMS 263
DS K+WD +G L+GH+ GIT GR +S +D T+KLWDI S
Sbjct: 165 SDSRLKIWDA----IEGTCASTLVGHIGGITSASLVDRGRNLVSCSRDGTSKLWDIPTSS 220
Query: 264 --SNTTDNSR 271
SN T SR
Sbjct: 221 IISNLTKLSR 230
Score = 51 (23.0 bits), Expect = 6.2e-09, Sum P(2) = 6.2e-09
Identities = 12/52 (23%), Positives = 24/52 (46%)
Query: 324 QKYIYTGSSDNSVYIYDLVS-GAQVAKLDFHNAPVRDCCWHPIYPMLISSSW 374
+ YI G + S+Y +D + + +L F N+P+ + + +S W
Sbjct: 316 KNYIIGGDHNGSIYFWDKRNLNSPFCRLQFTNSPIHHIKANSSNSKIANSIW 367
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 152 (58.6 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 49/174 (28%), Positives = 76/174 (43%)
Query: 84 LRWTITDTSLSPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFG 143
+ W + SPD R +V AS V + D S+RE + + H G
Sbjct: 145 INW-VRCAKFSPDGRLIVSASDDKTVKLWD--KSSRECVHSYCEHGGF------------ 189
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
+ V F G + AAG DN + V+D++ ++ H + VN + F +G+ + + S
Sbjct: 190 VTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSF-HPSGNYLITAS 248
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
DS K+ D + +GR L GH T + R G YF S G D+ +W
Sbjct: 249 SDSTLKILD----LMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 150 (57.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 57/240 (23%), Positives = 101/240 (42%)
Query: 147 VKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDS 206
V FS + ++L + D+ + V+ ++ + R HK V V F+ +GHL+ SGS D
Sbjct: 25 VDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSP-SGHLLASGSRDK 83
Query: 207 LCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMS--- 263
++W KG + V H + + DG+ F++ D+T K+W +
Sbjct: 84 TVRIWVPNV---KGEST-VFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLF 139
Query: 264 --SNTTDNSRLRDYDWDYRWMEYPSYARRLK---HPHDQSLATYKGHSVLRTLIRCYFSP 318
S + R + D R + S + +K + + +Y H T + F P
Sbjct: 140 SLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVD--FHP 197
Query: 319 EYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNI 378
T I DN+V ++D+ + + H+A V +HP LI++S D +
Sbjct: 198 S-GTC---IAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTL 253
Score = 142 (55.0 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 38/118 (32%), Positives = 52/118 (44%)
Query: 146 SVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDD 205
SV F +DGQ V A D + V+ K + H + V F+ + G LI S SDD
Sbjct: 108 SVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPD-GRLIVSASDD 166
Query: 206 SLCKVWD---RRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
K+WD R C S G +T++D G + G D T K+WD+R
Sbjct: 167 KTVKLWDKSSRECVHSYCEHGGF-------VTYVDFHPSGTCIAAAGMDNTVKVWDVR 217
Score = 50 (22.7 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 10/49 (20%), Positives = 22/49 (44%)
Query: 19 DSCHVLSRYLPVNGPWKVDGMNSRVYTSQFSNDGSFFVAASQESNIKVY 67
DSC ++ P + ++ G V FS G + S++ ++++
Sbjct: 40 DSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIW 88
>FB|FBgn0034931 [details] [associations]
symbol:CG2812 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE013599 Gene3D:2.130.10.10 SUPFAM:SSF50978
HSSP:P16649 GeneTree:ENSGT00550000074331 RefSeq:NP_611850.1
UniGene:Dm.11826 ProteinModelPortal:Q9W1G4 SMR:Q9W1G4
MINT:MINT-845989 STRING:Q9W1G4 PRIDE:Q9W1G4
EnsemblMetazoa:FBtr0072140 GeneID:37801 KEGG:dme:Dmel_CG2812
UCSC:CG2812-RA FlyBase:FBgn0034931 InParanoid:Q9W1G4 OMA:HRGSIYC
OrthoDB:EOG4QJQ3T PhylomeDB:Q9W1G4 GenomeRNAi:37801 NextBio:805473
ArrayExpress:Q9W1G4 Bgee:Q9W1G4 Uniprot:Q9W1G4
Length = 348
Score = 159 (61.0 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 77/272 (28%), Positives = 119/272 (43%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVN----TV---CFADETG 196
I+ +S DG EL+A GS++ Y ++ N + ++ H+ ++N TV CF D++
Sbjct: 89 IYCTCWSRDG-ELIATGSNDKTIKY-MRFNNDTNQLVGHEMELNMHDGTVRDMCFLDDSS 146
Query: 197 ---HLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQT 253
L+ SG CK++ C G GH I + S + F+S +DQT
Sbjct: 147 TKSRLLASGGAGD-CKIYITDC--GTGTPFQAYSGHTGHILSLYSWNNAM-FVSGSQDQT 202
Query: 254 TKLWDIR-KMSSNTTDNSRLRDYDWDYRWMEY----PSYARRLKHPH-DQSLATY--KGH 305
+ WD+R +S NT DN R +D + + P+ R L H D S Y +G+
Sbjct: 203 IRFWDLRVNVSVNTLDNDR-KDGGLESSAVTAVCVDPT-GRLLVSGHADSSCTLYDIRGN 260
Query: 306 SVLRTL------IRCYFSPEYSTAQKYIYTGSSDNSVYIYDL-------VSGAQVAKLDF 352
++ IRC +S + Y+ T S DNS+ + DL +S VA+
Sbjct: 261 RPIQRFYPHTAEIRCV---RFSPSAYYMLTCSYDNSIRLTDLQGDLAHELSSVVVAE--- 314
Query: 353 HNAPVRDCCWHPIYPMLISSSWDCNIVRWEIP 384
H WHP IS+S D W +P
Sbjct: 315 HKDKAITIRWHPTEFSFISTSADKTATLWALP 346
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 162 (62.1 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 41/136 (30%), Positives = 68/136 (50%)
Query: 147 VKFSTDGQELVAAGSDNF-IYVYDLQANKCSL-RIPAHKSDVNTVCFADETGHLIFSGSD 204
VK + G E++ +GSD+F + +++ K S+ R+ H+ +N V F+ + G S S
Sbjct: 356 VKAKSKGMEILISGSDDFTVIMWNPSVTKTSISRLTGHQQLINLVSFSPD-GRYFASASF 414
Query: 205 DSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR--KM 262
D K+WD + G+ G GH+ + + D RY +S KD T K+WDI+ KM
Sbjct: 415 DKSIKLWDGQ----SGKFLGNFRGHVGAVYQVCWSSDSRYLVSGSKDSTLKIWDIKTKKM 470
Query: 263 SSNTTDNS-RLRDYDW 277
++ + DW
Sbjct: 471 EKELPGHADEVYTVDW 486
Score = 137 (53.3 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 59/236 (25%), Positives = 98/236 (41%)
Query: 156 LVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRC 215
L ++ D+ I ++D ++ K + + H V + + E G LI+SGS D +V++
Sbjct: 245 LASSSKDSTIRIWDTESCKNLMSLSGHTMSVTCLKWGGE-G-LIYSGSQDRTVRVFNT-- 300
Query: 216 FISKGRANGVLMGHLEGITFIDSRRDGRYFISNGK-DQTTKLWDIRKMSSNTTDNSRLRD 274
+ GR VL GH + + D Y + G D T K +D + + R D
Sbjct: 301 --TDGRLVRVLDGHAHWVNTLALNTD--YVLRTGSYDHTGKEYDTLEEAQRVA-LERYND 355
Query: 275 YDWDYRWMEY-----PSYARRLKHPH--DQSLATYKGHSVLRTLIRCYFSPEYSTAQKYI 327
+ ME + + +P S++ GH L L+ FSP+ +Y
Sbjct: 356 VKAKSKGMEILISGSDDFTVIMWNPSVTKTSISRLTGHQQLINLVS--FSPD----GRYF 409
Query: 328 YTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWEI 383
+ S D S+ ++D SG + H V CW L+S S D + W+I
Sbjct: 410 ASASFDKSIKLWDGQSGKFLGNFRGHVGAVYQVCWSSDSRYLVSGSKDSTLKIWDI 465
Score = 121 (47.7 bits), Expect = 0.00026, P = 0.00026
Identities = 34/120 (28%), Positives = 58/120 (48%)
Query: 92 SLSPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFST 151
S SPD R+ AS + + D G S + L N H G ++ V +S+
Sbjct: 401 SFSPDGRYFASASFDKSIKLWD-GQSGK-FLGNFRGHVG------------AVYQVCWSS 446
Query: 152 DGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVW 211
D + LV+ D+ + ++D++ K +P H +V TV ++ + G + SGS D L ++W
Sbjct: 447 DSRYLVSGSKDSTLKIWDIKTKKMEKELPGHADEVYTVDWSPD-GDRVASGSKDRLLRIW 505
>DICTYBASE|DDB_G0269686 [details] [associations]
symbol:DDB_G0269686 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0269686 EMBL:AAFI02000005 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K11795 RefSeq:XP_646188.1
ProteinModelPortal:Q55DE3 EnsemblProtists:DDB0238180 GeneID:8617141
KEGG:ddi:DDB_G0269686 OMA:ECVNSIN ProtClustDB:CLSZ2729295
Uniprot:Q55DE3
Length = 895
Score = 113 (44.8 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 28/124 (22%), Positives = 61/124 (49%)
Query: 146 SVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDD 205
S+ F+ DG +V+ G D + ++D+ KC + H ++V F + + SG +D
Sbjct: 52 SINFNDDGSLIVSGGDDETVRIWDVGKRKCLTTLYGHSTNVFATNFLNNDNRKVISGGND 111
Query: 206 SLCKVWD---RRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKM 262
+ + +D ++C + K + VL ++ ++ + F+S+ D + +L+D+R
Sbjct: 112 ADIRYYDIENQKCTVYKHHSKKVLK-----LSVCPTQP--QVFLSSSSDGSVRLFDVRLK 164
Query: 263 SSNT 266
+T
Sbjct: 165 YKDT 168
Score = 102 (41.0 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 27/81 (33%), Positives = 40/81 (49%)
Query: 182 HKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGI---TFIDS 238
H VN++ F D+ G LI SG DD ++WD + K + L GH + F+++
Sbjct: 46 HNECVNSINFNDD-GSLIVSGGDDETVRIWD----VGKRKCLTTLYGHSTNVFATNFLNN 100
Query: 239 RRDGRYFISNGKDQTTKLWDI 259
D R IS G D + +DI
Sbjct: 101 --DNRKVISGGNDADIRYYDI 119
Score = 101 (40.6 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 26/81 (32%), Positives = 39/81 (48%)
Query: 302 YKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCC 361
Y GH +T+ F Y +YI +GS D+ ++I+D S V L+ H++ V
Sbjct: 773 YSGHVSEQTIKSVNF---YGPNSEYIVSGSDDSKLFIWDKESAKIVRILEGHDSHVNSVV 829
Query: 362 WHPIYPMLISSSWDCNIVRWE 382
HP P + +S D I WE
Sbjct: 830 CHPNEPCIATSGIDPYICLWE 850
Score = 66 (28.3 bits), Expect = 8.9e-06, Sum P(3) = 8.9e-06
Identities = 24/91 (26%), Positives = 42/91 (46%)
Query: 87 TITDTSLSP-DQRFLVYASICAIVNIVD---VGSSARESLANVTIHKGLDFSADGDEDEF 142
TI P D + AS V + D + + + ES N I++ ++ +++
Sbjct: 271 TIFSVEYHPFDGYSFITASSDGTVRLFDQRMIPNHSSESFVN--IYRNIEVPFPSEDEAT 328
Query: 143 GIFSVKFSTDGQELVAAGSDNFIYVYDLQAN 173
G FS +G E+V ++ IY+YDL+ N
Sbjct: 329 GC---AFSKNGNEIVVTYLNDNIYLYDLKKN 356
Score = 59 (25.8 bits), Expect = 8.9e-06, Sum P(3) = 8.9e-06
Identities = 10/37 (27%), Positives = 22/37 (59%)
Query: 35 KVDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDK 71
++ G N V + F++DGS V+ + +++++V K
Sbjct: 42 ELHGHNECVNSINFNDDGSLIVSGGDDETVRIWDVGK 78
Score = 47 (21.6 bits), Expect = 0.00066, Sum P(3) = 0.00066
Identities = 9/29 (31%), Positives = 19/29 (65%)
Query: 241 DGRYFISNGKDQTTKLWDIRKMSSNTTDN 269
DG FI+ D T +L+D R + ++++++
Sbjct: 281 DGYSFITASSDGTVRLFDQRMIPNHSSES 309
>WB|WBGene00018014 [details] [associations]
symbol:F33G12.2 species:6239 "Caenorhabditis elegans"
[GO:0019915 "lipid storage" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 GO:GO:0019915 HSSP:P16649
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 KO:K13124
OMA:CKQGAVR EMBL:FO080686 RefSeq:NP_494926.1
ProteinModelPortal:Q19986 SMR:Q19986 IntAct:Q19986 STRING:Q19986
EnsemblMetazoa:F33G12.2 GeneID:173867 KEGG:cel:CELE_F33G12.2
UCSC:F33G12.2 CTD:173867 WormBase:F33G12.2 InParanoid:Q19986
NextBio:881457 Uniprot:Q19986
Length = 305
Score = 157 (60.3 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 56/247 (22%), Positives = 105/247 (42%)
Query: 133 FSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFA 192
+S G+E + S+D ++ A G+D V+D++ K R H + VN V F
Sbjct: 54 YSGTGNE----VLDAASSSDNSQIAAGGADRACTVFDVETGKQLRRWRTHGAQVNAVAFN 109
Query: 193 DETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQ 252
+E+ ++FSGS D + +D C + + +GI ID +G ++ D
Sbjct: 110 EESS-VVFSGSMDCTMQAFD--CRSRSEKPIQIFNESTDGILSIDV--NGHEIVAGSADG 164
Query: 253 TTKLWDIRKMSSNTT---DNSRLRDYDWDYRWM---EYPSYARRLKHPHDQSLATYKGHS 306
+++ IR + D+ + D + R + + LA+YKGH
Sbjct: 165 NYRVYSIRDGNMTVDYMGDSVNSVSFTPDSNCLLAGVMGGIVRLIDKSSGKLLASYKGHQ 224
Query: 307 VLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIY 366
+ C + +++ +GS D VY+Y L+ V+KL+ + + HP
Sbjct: 225 NTEYKLDC----RVLQSIEHVASGSEDGFVYVYSLLDSHIVSKLEHPSKVIHSLTAHPKK 280
Query: 367 PMLISSS 373
L++++
Sbjct: 281 ERLMTAA 287
>UNIPROTKB|Q19986 [details] [associations]
symbol:F33G12.2 "Protein F33G12.2" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
GO:GO:0019915 HSSP:P16649 GeneTree:ENSGT00700000104496
HOGENOM:HOG000091642 KO:K13124 OMA:CKQGAVR EMBL:FO080686
RefSeq:NP_494926.1 ProteinModelPortal:Q19986 SMR:Q19986
IntAct:Q19986 STRING:Q19986 EnsemblMetazoa:F33G12.2 GeneID:173867
KEGG:cel:CELE_F33G12.2 UCSC:F33G12.2 CTD:173867 WormBase:F33G12.2
InParanoid:Q19986 NextBio:881457 Uniprot:Q19986
Length = 305
Score = 157 (60.3 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 56/247 (22%), Positives = 105/247 (42%)
Query: 133 FSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFA 192
+S G+E + S+D ++ A G+D V+D++ K R H + VN V F
Sbjct: 54 YSGTGNE----VLDAASSSDNSQIAAGGADRACTVFDVETGKQLRRWRTHGAQVNAVAFN 109
Query: 193 DETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQ 252
+E+ ++FSGS D + +D C + + +GI ID +G ++ D
Sbjct: 110 EESS-VVFSGSMDCTMQAFD--CRSRSEKPIQIFNESTDGILSIDV--NGHEIVAGSADG 164
Query: 253 TTKLWDIRKMSSNTT---DNSRLRDYDWDYRWM---EYPSYARRLKHPHDQSLATYKGHS 306
+++ IR + D+ + D + R + + LA+YKGH
Sbjct: 165 NYRVYSIRDGNMTVDYMGDSVNSVSFTPDSNCLLAGVMGGIVRLIDKSSGKLLASYKGHQ 224
Query: 307 VLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIY 366
+ C + +++ +GS D VY+Y L+ V+KL+ + + HP
Sbjct: 225 NTEYKLDC----RVLQSIEHVASGSEDGFVYVYSLLDSHIVSKLEHPSKVIHSLTAHPKK 280
Query: 367 PMLISSS 373
L++++
Sbjct: 281 ERLMTAA 287
>FB|FBgn0038666 [details] [associations]
symbol:Smu1 "SMU1 ortholog" species:7227 "Drosophila
melanogaster" [GO:0003674 "molecular_function" evidence=ND]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0007274
"neuromuscular synaptic transmission" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0072553 "terminal button organization" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 EMBL:AE014297
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007528 GO:GO:0007274 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 GO:GO:0072553 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
KO:K13111 OMA:NGHWDTV EMBL:AY051929 RefSeq:NP_001247189.1
RefSeq:NP_001247190.1 RefSeq:NP_650766.1 UniGene:Dm.1247 SMR:Q9VE18
EnsemblMetazoa:FBtr0083721 EnsemblMetazoa:FBtr0304689
EnsemblMetazoa:FBtr0304690 GeneID:42272 KEGG:dme:Dmel_CG5451
UCSC:CG5451-RA FlyBase:FBgn0038666 InParanoid:Q9VE18
OrthoDB:EOG4MKKXF GenomeRNAi:42272 NextBio:827995 Uniprot:Q9VE18
Length = 509
Score = 138 (53.6 bits), Expect = 9.8e-09, Sum P(2) = 9.8e-09
Identities = 47/178 (26%), Positives = 79/178 (44%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQ 97
G S V +QFS DG + + S + ++V+N K++KD++ +A DQ
Sbjct: 212 GQKSHVECAQFSPDGQYLITGSVDGFLEVWNFTTG-KVRKDLKYQA-----------QDQ 259
Query: 98 RFLVYASICAIVNIVD---VGSSARESLANV-TIHKGLDFSADGDEDEFGIFSVKFSTDG 153
++ ++ A+ D V S A++ V I G GI ++FS D
Sbjct: 260 FMMMEQAVLALNFSRDSEMVASGAQDGQIKVWRIITGQCLRKFEKAHTKGITCLQFSRDN 319
Query: 154 QELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVW 211
++++A D + ++ L++ K H S VN F + GH + S S D KVW
Sbjct: 320 SQVLSASFDYTVRLHGLKSGKMLKEFKGHSSFVNEATFTPD-GHSVLSASSDGTVKVW 376
Score = 67 (28.6 bits), Expect = 9.8e-09, Sum P(2) = 9.8e-09
Identities = 18/68 (26%), Positives = 28/68 (41%)
Query: 315 YFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSW 374
+ S S ++IY D +Y + + SG L+ H V HP +L S S
Sbjct: 441 FISATLSPRGEFIYCAGEDQVLYCFSVSSGKLERTLNVHEKDVIGLTHHPHQNLLASYSE 500
Query: 375 DCNIVRWE 382
D + W+
Sbjct: 501 DGLLKLWK 508
>TAIR|locus:2123929 [details] [associations]
symbol:VIP3 "AT4G29830" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009910 "negative regulation
of flower development" evidence=IGI;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=IPI] [GO:0010452 "histone H3-K36 methylation"
evidence=IMP] [GO:0051568 "histone H3-K4 methylation" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AL050352 EMBL:AL161575
GO:GO:0009910 GO:GO:0051568 HSSP:P16649 GO:GO:0080008 GO:GO:0010452
UniGene:At.23602 UniGene:At.72983 HOGENOM:HOG000036765 KO:K12602
OMA:PPSEVWG EMBL:BT008333 IPI:IPI00518529 PIR:T08544
RefSeq:NP_194712.1 SMR:Q9SZQ5 IntAct:Q9SZQ5 STRING:Q9SZQ5
EnsemblPlants:AT4G29830.1 GeneID:829105 KEGG:ath:AT4G29830
TAIR:At4g29830 InParanoid:Q9SZQ5 ProtClustDB:CLSN2685393
Genevestigator:Q9SZQ5 Uniprot:Q9SZQ5
Length = 321
Score = 157 (60.3 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 58/229 (25%), Positives = 97/229 (42%)
Query: 53 SFFVAASQ--ESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQRFLVYAS-ICAIV 109
S +AAS +S ++V++VD N I + W + P L A A V
Sbjct: 71 SGIIAASSSIDSFVRVFDVDTNATIAVLEAPPSEVWGM---QFEPKGTILAVAGGSSASV 127
Query: 110 NIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYD 169
+ D S S ++ S +F + SV +S +G+ L D I V+D
Sbjct: 128 KLWDTASWRLISTLSIPRPDAPKPSDKTSSKKF-VLSVAWSPNGKRLACGSMDGTICVFD 186
Query: 170 LQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRAN-GVLMG 228
+ +K ++ H V ++ F+ ++FSGSDD + D ++G+ G + G
Sbjct: 187 VDRSKLLHQLEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHD-----AEGKTLLGSMSG 241
Query: 229 HLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSSNTTDNSRLRDYDW 277
H + +D+ DG + D+T +LWD+ KM + S D W
Sbjct: 242 HTSWVLSVDASPDGGAIATGSSDRTVRLWDL-KMRAAIQTMSNHNDQVW 289
>UNIPROTKB|G4MRA1 [details] [associations]
symbol:MGG_04693 "WD repeat-containing protein 57"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
KO:K12857 RefSeq:XP_003710838.1 ProteinModelPortal:G4MRA1
EnsemblFungi:MGG_04693T0 GeneID:2678191 KEGG:mgr:MGG_04693
Uniprot:G4MRA1
Length = 352
Score = 157 (60.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 70/292 (23%), Positives = 129/292 (44%)
Query: 116 SSARESLANVTIHKG-LDFSADGDEDEFGIFS--------VKFSTDGQELVAAGSDNFIY 166
+SA + +A+ ++ + L + A+GD + +GI S +++S D + +A +D +
Sbjct: 69 NSAGQYIASGSMDRSILLWRANGDCENYGILSGHRGAILDLQWSRDSDIIFSASADMHLA 128
Query: 167 VYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVL 226
+DL + R H+ +N++ + ++FSGSDD +WD R K A +
Sbjct: 129 SWDLTTGERIRRYVGHEEVINSLDISKRGEEILFSGSDDGTIGIWDPR----KKHAADYI 184
Query: 227 MGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRK------MSSNTTDNSRLRDYDWDYR 280
+T + G S G D K+WD+RK M+ + + L+
Sbjct: 185 ESDFP-VTAVAISEAGNEIYSGGIDNDIKVWDVRKKAVVYNMAGHRDTITTLKVSPDSQS 243
Query: 281 WMEYP--SYAR----RLKHPHDQSLATYKGH--SVLRTLIRCYFSPEYSTAQKYIYTGSS 332
+ Y S AR R P ++ + T+ G + + L+R + E K + G++
Sbjct: 244 LLSYAMDSTARTWDIRPFAPTERHIRTFDGAPMGIEKNLVRGGWDKE----GKRVAMGAA 299
Query: 333 DNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHP-IYPMLISSSWDCNIVRWEI 383
D +V I+ +G KL H A V + P P+++S S D ++ E+
Sbjct: 300 DGTVVIWSNETGKLTYKLPGHKAAVNCVEFSPGTEPLILSGSSDKTLLVGEL 351
>ZFIN|ZDB-GENE-030131-6305 [details] [associations]
symbol:fbxw11a "F-box and WD-40 domain protein
11a" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-030131-6305 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
HSSP:Q9Y297 GeneTree:ENSGT00690000101849 EMBL:CABZ01001943
EMBL:CABZ01001944 EMBL:CABZ01001945 EMBL:CABZ01001946 EMBL:BC045356
IPI:IPI00502564 RefSeq:NP_958467.1 UniGene:Dr.78612 SMR:Q7ZVZ1
STRING:Q7ZVZ1 Ensembl:ENSDART00000036901 GeneID:334373
KEGG:dre:334373 CTD:334373 OMA:MESQINT NextBio:20810369
Uniprot:Q7ZVZ1
Length = 527
Score = 160 (61.4 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 60/255 (23%), Positives = 118/255 (46%)
Query: 139 EDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFA-DETGH 197
E+ G++ +++ D ++++ DN I ++D Q+ +C + H V +C DE
Sbjct: 223 ENSKGVYCLQYDDD--KIISGLRDNSIKIWDKQSLECLKVLTGHTGSV--LCLQYDE--R 276
Query: 198 LIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
+I +GS DS +VWD +S G L+ H E + + R ++ KD++ +W
Sbjct: 277 VIVTGSSDSTVRVWD----VSSGEVLNTLIHHNEAVLHL--RFCNGLMVTCSKDRSIAVW 330
Query: 258 DIRKMSSNTT------DNSRLRDYDWDYRWMEYPSYARRLKHPHDQS---LATYKGHSVL 308
D+ + + + + D+D +++ S R +K + + T GH
Sbjct: 331 DMASATDISLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGH--- 387
Query: 309 RTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPM 368
+ I C +Y + + +GSSDN++ ++D+ GA + L+ H VR C
Sbjct: 388 KRGIACL---QYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR--CIRFDNKR 440
Query: 369 LISSSWDCNIVRWEI 383
++S ++D I W++
Sbjct: 441 IVSGAYDGKIKVWDL 455
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 155 (59.6 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 31/112 (27%), Positives = 57/112 (50%)
Query: 149 FSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLC 208
FS DG+ L+ A D +YV+ ++ + R+ H+ V + CF+ + G LI S S D
Sbjct: 34 FSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPD-GRLIASSSSDHSI 92
Query: 209 KVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
++WD +++ + VL GH + + D + S G D+ +W+++
Sbjct: 93 RLWD----VARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQ 140
Score = 139 (54.0 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 54/219 (24%), Positives = 90/219 (41%)
Query: 182 HKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRD 241
H +VN F+ + G + + SDD VW + GR L GH + D
Sbjct: 25 HHGEVNCSAFSPD-GRTLLTASDDGCVYVWGTK----SGRLLWRLAGHRGPVKSCCFSPD 79
Query: 242 GRYFISNGKDQTTKLWDIRKMSSNTTDNSRLRDYDWDYRWMEYPSYARRLKHPH-DQSLA 300
GR S+ D + +LWD+ + L+ + + + +++L D+
Sbjct: 80 GRLIASSSSDHSIRLWDVARSKCLHV----LKGHQRSVETVSFSPDSKQLASGGWDKRAI 135
Query: 301 TYKGHSVLRT--LI-RC--YFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAK---LDF 352
++ S R L+ C S ++S + TGS D++V+I+DL + V L+
Sbjct: 136 VWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEG 195
Query: 353 HNAPVRDCCWHPIYPMLISSSWDCNIVRWEIPGIGEAPL 391
H + C + +L S SWD I W+ P PL
Sbjct: 196 HTGNI-SCLCYSASGLLASGSWDKTICVWK-PTTNNLPL 232
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 138 (53.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 56/232 (24%), Positives = 97/232 (41%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQ 97
G + V + +G V+AS++ IK++ V + ++ T W + P+Q
Sbjct: 190 GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF--TGHREWV---RMVRPNQ 244
Query: 98 RFLVYASICAIVNIVDVGSSA-RESLANVTIHKGL--------DFSADGDEDEFGIFSVK 148
+ AS C+ V V A +E A + H+ + + S + G + K
Sbjct: 245 DGTLIAS-CSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKK 303
Query: 149 FSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLC 208
G L++ D I ++D+ C + + H + V V F G I S +DD
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLF-HSGGKFILSCADDKTL 362
Query: 209 KVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
+VWD + +K R L H +T +D + Y ++ DQT K+W+ R
Sbjct: 363 RVWDYK---NK-RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 126 (49.4 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 34/144 (23%), Positives = 63/144 (43%)
Query: 116 SSARESLANVTIHKGLDF--SADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQAN 173
S++ ++ V ++ DF + G D + + F G+ L + +D I ++D Q
Sbjct: 125 SASEDATIKVWDYETGDFERTLKGHTDS--VQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 174 KCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGI 233
+C + H +V++V H++ S S D K+W+ + G GH E +
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWE----VQTGYCVKTFTGHREWV 237
Query: 234 TFIDSRRDGRYFISNGKDQTTKLW 257
+ +DG S DQT ++W
Sbjct: 238 RMVRPNQDGTLIASCSNDQTVRVW 261
Score = 115 (45.5 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 27/105 (25%), Positives = 50/105 (47%)
Query: 156 LVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRC 215
+V+A D I V+D + + H V + F D +G L+ S S D K+WD +
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWDFQG 181
Query: 216 FISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
F + GH ++ + +G + +S +D+T K+W+++
Sbjct: 182 F----ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Score = 73 (30.8 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 27/109 (24%), Positives = 53/109 (48%)
Query: 238 SRRDGRYFISNGKDQTTKLWDIRKMSSNTTDNSRLRDYDWDYRWMEYPSYARR-LKHPHD 296
S + G + +S +D+T K+WD+ S+ + + +W R + + S + L D
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDV---STGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADD 359
Query: 297 QSLAT--YKGHSVLRTL-IRCYF--SPEYSTAQKYIYTGSSDNSVYIYD 340
++L YK ++TL +F S ++ Y+ TGS D +V +++
Sbjct: 360 KTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 57 (25.1 bits), Expect = 5.8e-07, Sum P(3) = 5.8e-07
Identities = 13/63 (20%), Positives = 30/63 (47%)
Query: 320 YSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIV 379
+ + K+I + + D ++ ++D + + L+ H V +H P +++ S D +
Sbjct: 346 FHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Query: 380 RWE 382
WE
Sbjct: 406 VWE 408
Score = 55 (24.4 bits), Expect = 9.2e-07, Sum P(3) = 9.2e-07
Identities = 13/57 (22%), Positives = 30/57 (52%)
Query: 326 YIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWE 382
++ +GS D ++ ++D+ +G + L H+ VR +H ++S + D + W+
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 39 (18.8 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 34 WKVDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVD 70
+ + G S V F S V+AS+++ IKV++ +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYE 138
Score = 38 (18.4 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 367 PMLISSSWDCNIVRWEI 383
P L+S S D I W++
Sbjct: 309 PFLLSGSRDKTIKMWDV 325
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 138 (53.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 56/232 (24%), Positives = 97/232 (41%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQ 97
G + V + +G V+AS++ IK++ V + ++ T W + P+Q
Sbjct: 190 GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF--TGHREWV---RMVRPNQ 244
Query: 98 RFLVYASICAIVNIVDVGSSA-RESLANVTIHKGL--------DFSADGDEDEFGIFSVK 148
+ AS C+ V V A +E A + H+ + + S + G + K
Sbjct: 245 DGTLIAS-CSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKK 303
Query: 149 FSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLC 208
G L++ D I ++D+ C + + H + V V F G I S +DD
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLF-HSGGKFILSCADDKTL 362
Query: 209 KVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
+VWD + +K R L H +T +D + Y ++ DQT K+W+ R
Sbjct: 363 RVWDYK---NK-RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 126 (49.4 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 34/144 (23%), Positives = 63/144 (43%)
Query: 116 SSARESLANVTIHKGLDF--SADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQAN 173
S++ ++ V ++ DF + G D + + F G+ L + +D I ++D Q
Sbjct: 125 SASEDATIKVWDYETGDFERTLKGHTDS--VEDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 174 KCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGI 233
+C + H +V++V H++ S S D K+W+ + G GH E +
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWE----VQTGYCVKTFTGHREWV 237
Query: 234 TFIDSRRDGRYFISNGKDQTTKLW 257
+ +DG S DQT ++W
Sbjct: 238 RMVRPNQDGTLIASCSNDQTVRVW 261
Score = 115 (45.5 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 27/105 (25%), Positives = 50/105 (47%)
Query: 156 LVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRC 215
+V+A D I V+D + + H V + F D +G L+ S S D K+WD +
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVEDISF-DHSGKLLASCSADMTIKLWDFQG 181
Query: 216 FISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
F + GH ++ + +G + +S +D+T K+W+++
Sbjct: 182 F----ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Score = 73 (30.8 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 27/109 (24%), Positives = 53/109 (48%)
Query: 238 SRRDGRYFISNGKDQTTKLWDIRKMSSNTTDNSRLRDYDWDYRWMEYPSYARR-LKHPHD 296
S + G + +S +D+T K+WD+ S+ + + +W R + + S + L D
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDV---STGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADD 359
Query: 297 QSLAT--YKGHSVLRTL-IRCYF--SPEYSTAQKYIYTGSSDNSVYIYD 340
++L YK ++TL +F S ++ Y+ TGS D +V +++
Sbjct: 360 KTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 57 (25.1 bits), Expect = 5.8e-07, Sum P(3) = 5.8e-07
Identities = 13/63 (20%), Positives = 30/63 (47%)
Query: 320 YSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIV 379
+ + K+I + + D ++ ++D + + L+ H V +H P +++ S D +
Sbjct: 346 FHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Query: 380 RWE 382
WE
Sbjct: 406 VWE 408
Score = 55 (24.4 bits), Expect = 9.2e-07, Sum P(3) = 9.2e-07
Identities = 13/57 (22%), Positives = 30/57 (52%)
Query: 326 YIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWE 382
++ +GS D ++ ++D+ +G + L H+ VR +H ++S + D + W+
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 39 (18.8 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 34 WKVDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVD 70
+ + G S V F S V+AS+++ IKV++ +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYE 138
Score = 38 (18.4 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 367 PMLISSSWDCNIVRWEI 383
P L+S S D I W++
Sbjct: 309 PFLLSGSRDKTIKMWDV 325
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 138 (53.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 56/232 (24%), Positives = 97/232 (41%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQ 97
G + V + +G V+AS++ IK++ V + ++ T W + P+Q
Sbjct: 190 GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF--TGHREWV---RMVRPNQ 244
Query: 98 RFLVYASICAIVNIVDVGSSA-RESLANVTIHKGL--------DFSADGDEDEFGIFSVK 148
+ AS C+ V V A +E A + H+ + + S + G + K
Sbjct: 245 DGTLIAS-CSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKK 303
Query: 149 FSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLC 208
G L++ D I ++D+ C + + H + V V F G I S +DD
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLF-HSGGKFILSCADDKTL 362
Query: 209 KVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
+VWD + +K R L H +T +D + Y ++ DQT K+W+ R
Sbjct: 363 RVWDYK---NK-RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 126 (49.4 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 34/144 (23%), Positives = 63/144 (43%)
Query: 116 SSARESLANVTIHKGLDF--SADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQAN 173
S++ ++ V ++ DF + G D + + F G+ L + +D I ++D Q
Sbjct: 125 SASEDATIKVWDYETGDFERTLKGHTDS--VQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 174 KCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGI 233
+C + H +V++V H++ S S D K+W+ + G GH E +
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWE----VQTGYCVKTFTGHREWV 237
Query: 234 TFIDSRRDGRYFISNGKDQTTKLW 257
+ +DG S DQT ++W
Sbjct: 238 RMVRPNQDGTLIASCSNDQTVRVW 261
Score = 115 (45.5 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 27/105 (25%), Positives = 50/105 (47%)
Query: 156 LVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRC 215
+V+A D I V+D + + H V + F D +G L+ S S D K+WD +
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWDFQG 181
Query: 216 FISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
F + GH ++ + +G + +S +D+T K+W+++
Sbjct: 182 F----ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Score = 73 (30.8 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 27/109 (24%), Positives = 53/109 (48%)
Query: 238 SRRDGRYFISNGKDQTTKLWDIRKMSSNTTDNSRLRDYDWDYRWMEYPSYARR-LKHPHD 296
S + G + +S +D+T K+WD+ S+ + + +W R + + S + L D
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDV---STGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADD 359
Query: 297 QSLAT--YKGHSVLRTL-IRCYF--SPEYSTAQKYIYTGSSDNSVYIYD 340
++L YK ++TL +F S ++ Y+ TGS D +V +++
Sbjct: 360 KTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 57 (25.1 bits), Expect = 5.8e-07, Sum P(3) = 5.8e-07
Identities = 13/63 (20%), Positives = 30/63 (47%)
Query: 320 YSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIV 379
+ + K+I + + D ++ ++D + + L+ H V +H P +++ S D +
Sbjct: 346 FHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Query: 380 RWE 382
WE
Sbjct: 406 VWE 408
Score = 55 (24.4 bits), Expect = 9.2e-07, Sum P(3) = 9.2e-07
Identities = 13/57 (22%), Positives = 30/57 (52%)
Query: 326 YIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWE 382
++ +GS D ++ ++D+ +G + L H+ VR +H ++S + D + W+
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 39 (18.8 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 34 WKVDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVD 70
+ + G S V F S V+AS+++ IKV++ +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYE 138
Score = 38 (18.4 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 367 PMLISSSWDCNIVRWEI 383
P L+S S D I W++
Sbjct: 309 PFLLSGSRDKTIKMWDV 325
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 138 (53.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 56/232 (24%), Positives = 97/232 (41%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQ 97
G + V + +G V+AS++ IK++ V + ++ T W + P+Q
Sbjct: 190 GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF--TGHREWV---RMVRPNQ 244
Query: 98 RFLVYASICAIVNIVDVGSSA-RESLANVTIHKGL--------DFSADGDEDEFGIFSVK 148
+ AS C+ V V A +E A + H+ + + S + G + K
Sbjct: 245 DGTLIAS-CSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKK 303
Query: 149 FSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLC 208
G L++ D I ++D+ C + + H + V V F G I S +DD
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLF-HSGGKFILSCADDKTL 362
Query: 209 KVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
+VWD + +K R L H +T +D + Y ++ DQT K+W+ R
Sbjct: 363 RVWDYK---NK-RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 126 (49.4 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 34/144 (23%), Positives = 63/144 (43%)
Query: 116 SSARESLANVTIHKGLDF--SADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQAN 173
S++ ++ V ++ DF + G D + + F G+ L + +D I ++D Q
Sbjct: 125 SASEDATIKVWDYETGDFERTLKGHTDS--VQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 174 KCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGI 233
+C + H +V++V H++ S S D K+W+ + G GH E +
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWE----VQTGYCVKTFTGHREWV 237
Query: 234 TFIDSRRDGRYFISNGKDQTTKLW 257
+ +DG S DQT ++W
Sbjct: 238 RMVRPNQDGTLIASCSNDQTVRVW 261
Score = 115 (45.5 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 27/105 (25%), Positives = 50/105 (47%)
Query: 156 LVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRC 215
+V+A D I V+D + + H V + F D +G L+ S S D K+WD +
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWDFQG 181
Query: 216 FISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
F + GH ++ + +G + +S +D+T K+W+++
Sbjct: 182 F----ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Score = 73 (30.8 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 27/109 (24%), Positives = 53/109 (48%)
Query: 238 SRRDGRYFISNGKDQTTKLWDIRKMSSNTTDNSRLRDYDWDYRWMEYPSYARR-LKHPHD 296
S + G + +S +D+T K+WD+ S+ + + +W R + + S + L D
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDV---STGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADD 359
Query: 297 QSLAT--YKGHSVLRTL-IRCYF--SPEYSTAQKYIYTGSSDNSVYIYD 340
++L YK ++TL +F S ++ Y+ TGS D +V +++
Sbjct: 360 KTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 57 (25.1 bits), Expect = 5.8e-07, Sum P(3) = 5.8e-07
Identities = 13/63 (20%), Positives = 30/63 (47%)
Query: 320 YSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIV 379
+ + K+I + + D ++ ++D + + L+ H V +H P +++ S D +
Sbjct: 346 FHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Query: 380 RWE 382
WE
Sbjct: 406 VWE 408
Score = 55 (24.4 bits), Expect = 9.2e-07, Sum P(3) = 9.2e-07
Identities = 13/57 (22%), Positives = 30/57 (52%)
Query: 326 YIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWE 382
++ +GS D ++ ++D+ +G + L H+ VR +H ++S + D + W+
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 39 (18.8 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 34 WKVDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVD 70
+ + G S V F S V+AS+++ IKV++ +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYE 138
Score = 38 (18.4 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 367 PMLISSSWDCNIVRWEI 383
P L+S S D I W++
Sbjct: 309 PFLLSGSRDKTIKMWDV 325
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 138 (53.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 56/232 (24%), Positives = 97/232 (41%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQ 97
G + V + +G V+AS++ IK++ V + ++ T W + P+Q
Sbjct: 190 GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF--TGHREWV---RMVRPNQ 244
Query: 98 RFLVYASICAIVNIVDVGSSA-RESLANVTIHKGL--------DFSADGDEDEFGIFSVK 148
+ AS C+ V V A +E A + H+ + + S + G + K
Sbjct: 245 DGTLIAS-CSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKK 303
Query: 149 FSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLC 208
G L++ D I ++D+ C + + H + V V F G I S +DD
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLF-HSGGKFILSCADDKTL 362
Query: 209 KVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
+VWD + +K R L H +T +D + Y ++ DQT K+W+ R
Sbjct: 363 RVWDYK---NK-RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 126 (49.4 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 34/144 (23%), Positives = 63/144 (43%)
Query: 116 SSARESLANVTIHKGLDF--SADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQAN 173
S++ ++ V ++ DF + G D + + F G+ L + +D I ++D Q
Sbjct: 125 SASEDATIKVWDYETGDFERTLKGHTDS--VQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 174 KCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGI 233
+C + H +V++V H++ S S D K+W+ + G GH E +
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWE----VQTGYCVKTFTGHREWV 237
Query: 234 TFIDSRRDGRYFISNGKDQTTKLW 257
+ +DG S DQT ++W
Sbjct: 238 RMVRPNQDGTLIASCSNDQTVRVW 261
Score = 115 (45.5 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 27/105 (25%), Positives = 50/105 (47%)
Query: 156 LVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRC 215
+V+A D I V+D + + H V + F D +G L+ S S D K+WD +
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWDFQG 181
Query: 216 FISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
F + GH ++ + +G + +S +D+T K+W+++
Sbjct: 182 F----ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Score = 73 (30.8 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 27/109 (24%), Positives = 53/109 (48%)
Query: 238 SRRDGRYFISNGKDQTTKLWDIRKMSSNTTDNSRLRDYDWDYRWMEYPSYARR-LKHPHD 296
S + G + +S +D+T K+WD+ S+ + + +W R + + S + L D
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDV---STGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADD 359
Query: 297 QSLAT--YKGHSVLRTL-IRCYF--SPEYSTAQKYIYTGSSDNSVYIYD 340
++L YK ++TL +F S ++ Y+ TGS D +V +++
Sbjct: 360 KTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 57 (25.1 bits), Expect = 5.8e-07, Sum P(3) = 5.8e-07
Identities = 13/63 (20%), Positives = 30/63 (47%)
Query: 320 YSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIV 379
+ + K+I + + D ++ ++D + + L+ H V +H P +++ S D +
Sbjct: 346 FHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Query: 380 RWE 382
WE
Sbjct: 406 VWE 408
Score = 55 (24.4 bits), Expect = 9.2e-07, Sum P(3) = 9.2e-07
Identities = 13/57 (22%), Positives = 30/57 (52%)
Query: 326 YIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWE 382
++ +GS D ++ ++D+ +G + L H+ VR +H ++S + D + W+
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 39 (18.8 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 34 WKVDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVD 70
+ + G S V F S V+AS+++ IKV++ +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYE 138
Score = 38 (18.4 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 367 PMLISSSWDCNIVRWEI 383
P L+S S D I W++
Sbjct: 309 PFLLSGSRDKTIKMWDV 325
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 138 (53.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 56/232 (24%), Positives = 97/232 (41%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQ 97
G + V + +G V+AS++ IK++ V + ++ T W + P+Q
Sbjct: 190 GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF--TGHREWV---RMVRPNQ 244
Query: 98 RFLVYASICAIVNIVDVGSSA-RESLANVTIHKGL--------DFSADGDEDEFGIFSVK 148
+ AS C+ V V A +E A + H+ + + S + G + K
Sbjct: 245 DGTLIAS-CSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKK 303
Query: 149 FSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLC 208
G L++ D I ++D+ C + + H + V V F G I S +DD
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLF-HSGGKFILSCADDKTL 362
Query: 209 KVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
+VWD + +K R L H +T +D + Y ++ DQT K+W+ R
Sbjct: 363 RVWDYK---NK-RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 126 (49.4 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 34/144 (23%), Positives = 63/144 (43%)
Query: 116 SSARESLANVTIHKGLDF--SADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQAN 173
S++ ++ V ++ DF + G D + + F G+ L + +D I ++D Q
Sbjct: 125 SASEDATIKVWDYETGDFERTLKGHTDS--VQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 174 KCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGI 233
+C + H +V++V H++ S S D K+W+ + G GH E +
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWE----VQTGYCVKTFTGHREWV 237
Query: 234 TFIDSRRDGRYFISNGKDQTTKLW 257
+ +DG S DQT ++W
Sbjct: 238 RMVRPNQDGTLIASCSNDQTVRVW 261
Score = 115 (45.5 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 27/105 (25%), Positives = 50/105 (47%)
Query: 156 LVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRC 215
+V+A D I V+D + + H V + F D +G L+ S S D K+WD +
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWDFQG 181
Query: 216 FISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
F + GH ++ + +G + +S +D+T K+W+++
Sbjct: 182 F----ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Score = 73 (30.8 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 27/109 (24%), Positives = 53/109 (48%)
Query: 238 SRRDGRYFISNGKDQTTKLWDIRKMSSNTTDNSRLRDYDWDYRWMEYPSYARR-LKHPHD 296
S + G + +S +D+T K+WD+ S+ + + +W R + + S + L D
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDV---STGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADD 359
Query: 297 QSLAT--YKGHSVLRTL-IRCYF--SPEYSTAQKYIYTGSSDNSVYIYD 340
++L YK ++TL +F S ++ Y+ TGS D +V +++
Sbjct: 360 KTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 57 (25.1 bits), Expect = 5.8e-07, Sum P(3) = 5.8e-07
Identities = 13/63 (20%), Positives = 30/63 (47%)
Query: 320 YSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIV 379
+ + K+I + + D ++ ++D + + L+ H V +H P +++ S D +
Sbjct: 346 FHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Query: 380 RWE 382
WE
Sbjct: 406 VWE 408
Score = 55 (24.4 bits), Expect = 9.2e-07, Sum P(3) = 9.2e-07
Identities = 13/57 (22%), Positives = 30/57 (52%)
Query: 326 YIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWE 382
++ +GS D ++ ++D+ +G + L H+ VR +H ++S + D + W+
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 39 (18.8 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 34 WKVDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVD 70
+ + G S V F S V+AS+++ IKV++ +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYE 138
Score = 38 (18.4 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 367 PMLISSSWDCNIVRWEI 383
P L+S S D I W++
Sbjct: 309 PFLLSGSRDKTIKMWDV 325
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 138 (53.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 56/232 (24%), Positives = 97/232 (41%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQ 97
G + V + +G V+AS++ IK++ V + ++ T W + P+Q
Sbjct: 190 GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF--TGHREWV---RMVRPNQ 244
Query: 98 RFLVYASICAIVNIVDVGSSA-RESLANVTIHKGL--------DFSADGDEDEFGIFSVK 148
+ AS C+ V V A +E A + H+ + + S + G + K
Sbjct: 245 DGTLIAS-CSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKK 303
Query: 149 FSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLC 208
G L++ D I ++D+ C + + H + V V F G I S +DD
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLF-HSGGKFILSCADDKTL 362
Query: 209 KVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
+VWD + +K R L H +T +D + Y ++ DQT K+W+ R
Sbjct: 363 RVWDYK---NK-RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 126 (49.4 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 34/144 (23%), Positives = 63/144 (43%)
Query: 116 SSARESLANVTIHKGLDF--SADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQAN 173
S++ ++ V ++ DF + G D + + F G+ L + +D I ++D Q
Sbjct: 125 SASEDATIKVWDYETGDFERTLKGHTDS--VQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 174 KCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGI 233
+C + H +V++V H++ S S D K+W+ + G GH E +
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWE----VQTGYCVKTFTGHREWV 237
Query: 234 TFIDSRRDGRYFISNGKDQTTKLW 257
+ +DG S DQT ++W
Sbjct: 238 RMVRPNQDGTLIASCSNDQTVRVW 261
Score = 115 (45.5 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 27/105 (25%), Positives = 50/105 (47%)
Query: 156 LVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRC 215
+V+A D I V+D + + H V + F D +G L+ S S D K+WD +
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWDFQG 181
Query: 216 FISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
F + GH ++ + +G + +S +D+T K+W+++
Sbjct: 182 F----ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Score = 73 (30.8 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 27/109 (24%), Positives = 53/109 (48%)
Query: 238 SRRDGRYFISNGKDQTTKLWDIRKMSSNTTDNSRLRDYDWDYRWMEYPSYARR-LKHPHD 296
S + G + +S +D+T K+WD+ S+ + + +W R + + S + L D
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDV---STGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADD 359
Query: 297 QSLAT--YKGHSVLRTL-IRCYF--SPEYSTAQKYIYTGSSDNSVYIYD 340
++L YK ++TL +F S ++ Y+ TGS D +V +++
Sbjct: 360 KTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 57 (25.1 bits), Expect = 5.8e-07, Sum P(3) = 5.8e-07
Identities = 13/63 (20%), Positives = 30/63 (47%)
Query: 320 YSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIV 379
+ + K+I + + D ++ ++D + + L+ H V +H P +++ S D +
Sbjct: 346 FHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Query: 380 RWE 382
WE
Sbjct: 406 VWE 408
Score = 55 (24.4 bits), Expect = 9.2e-07, Sum P(3) = 9.2e-07
Identities = 13/57 (22%), Positives = 30/57 (52%)
Query: 326 YIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWE 382
++ +GS D ++ ++D+ +G + L H+ VR +H ++S + D + W+
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 39 (18.8 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 34 WKVDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVD 70
+ + G S V F S V+AS+++ IKV++ +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYE 138
Score = 38 (18.4 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 367 PMLISSSWDCNIVRWEI 383
P L+S S D I W++
Sbjct: 309 PFLLSGSRDKTIKMWDV 325
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 138 (53.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 56/232 (24%), Positives = 97/232 (41%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQ 97
G + V + +G V+AS++ IK++ V + ++ T W + P+Q
Sbjct: 190 GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF--TGHREWV---RMVRPNQ 244
Query: 98 RFLVYASICAIVNIVDVGSSA-RESLANVTIHKGL--------DFSADGDEDEFGIFSVK 148
+ AS C+ V V A +E A + H+ + + S + G + K
Sbjct: 245 DGTLIAS-CSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKK 303
Query: 149 FSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLC 208
G L++ D I ++D+ C + + H + V V F G I S +DD
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLF-HSGGKFILSCADDKTL 362
Query: 209 KVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
+VWD + +K R L H +T +D + Y ++ DQT K+W+ R
Sbjct: 363 RVWDYK---NK-RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 126 (49.4 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 34/144 (23%), Positives = 63/144 (43%)
Query: 116 SSARESLANVTIHKGLDF--SADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQAN 173
S++ ++ V ++ DF + G D + + F G+ L + +D I ++D Q
Sbjct: 125 SASEDATIKVWDYETGDFERTLKGHTDS--VQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 174 KCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGI 233
+C + H +V++V H++ S S D K+W+ + G GH E +
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWE----VQTGYCVKTFTGHREWV 237
Query: 234 TFIDSRRDGRYFISNGKDQTTKLW 257
+ +DG S DQT ++W
Sbjct: 238 RMVRPNQDGTLIASCSNDQTVRVW 261
Score = 115 (45.5 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 27/105 (25%), Positives = 50/105 (47%)
Query: 156 LVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRC 215
+V+A D I V+D + + H V + F D +G L+ S S D K+WD +
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWDFQG 181
Query: 216 FISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
F + GH ++ + +G + +S +D+T K+W+++
Sbjct: 182 F----ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Score = 73 (30.8 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 27/109 (24%), Positives = 53/109 (48%)
Query: 238 SRRDGRYFISNGKDQTTKLWDIRKMSSNTTDNSRLRDYDWDYRWMEYPSYARR-LKHPHD 296
S + G + +S +D+T K+WD+ S+ + + +W R + + S + L D
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDV---STGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADD 359
Query: 297 QSLAT--YKGHSVLRTL-IRCYF--SPEYSTAQKYIYTGSSDNSVYIYD 340
++L YK ++TL +F S ++ Y+ TGS D +V +++
Sbjct: 360 KTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 57 (25.1 bits), Expect = 5.8e-07, Sum P(3) = 5.8e-07
Identities = 13/63 (20%), Positives = 30/63 (47%)
Query: 320 YSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIV 379
+ + K+I + + D ++ ++D + + L+ H V +H P +++ S D +
Sbjct: 346 FHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Query: 380 RWE 382
WE
Sbjct: 406 VWE 408
Score = 55 (24.4 bits), Expect = 9.2e-07, Sum P(3) = 9.2e-07
Identities = 13/57 (22%), Positives = 30/57 (52%)
Query: 326 YIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWE 382
++ +GS D ++ ++D+ +G + L H+ VR +H ++S + D + W+
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 39 (18.8 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 34 WKVDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVD 70
+ + G S V F S V+AS+++ IKV++ +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYE 138
Score = 38 (18.4 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 367 PMLISSSWDCNIVRWEI 383
P L+S S D I W++
Sbjct: 309 PFLLSGSRDKTIKMWDV 325
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 138 (53.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 56/232 (24%), Positives = 97/232 (41%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQ 97
G + V + +G V+AS++ IK++ V + ++ T W + P+Q
Sbjct: 190 GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF--TGHREWV---RMVRPNQ 244
Query: 98 RFLVYASICAIVNIVDVGSSA-RESLANVTIHKGL--------DFSADGDEDEFGIFSVK 148
+ AS C+ V V A +E A + H+ + + S + G + K
Sbjct: 245 DGTLIAS-CSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKK 303
Query: 149 FSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLC 208
G L++ D I ++D+ C + + H + V V F G I S +DD
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLF-HSGGKFILSCADDKTL 362
Query: 209 KVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
+VWD + +K R L H +T +D + Y ++ DQT K+W+ R
Sbjct: 363 RVWDYK---NK-RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 126 (49.4 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 34/144 (23%), Positives = 63/144 (43%)
Query: 116 SSARESLANVTIHKGLDF--SADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQAN 173
S++ ++ V ++ DF + G D + + F G+ L + +D I ++D Q
Sbjct: 125 SASEDATIKVWDYETGDFERTLKGHTDS--VQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 174 KCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGI 233
+C + H +V++V H++ S S D K+W+ + G GH E +
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWE----VQTGYCVKTFTGHREWV 237
Query: 234 TFIDSRRDGRYFISNGKDQTTKLW 257
+ +DG S DQT ++W
Sbjct: 238 RMVRPNQDGTLIASCSNDQTVRVW 261
Score = 115 (45.5 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 27/105 (25%), Positives = 50/105 (47%)
Query: 156 LVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRC 215
+V+A D I V+D + + H V + F D +G L+ S S D K+WD +
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWDFQG 181
Query: 216 FISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
F + GH ++ + +G + +S +D+T K+W+++
Sbjct: 182 F----ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Score = 73 (30.8 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 27/109 (24%), Positives = 53/109 (48%)
Query: 238 SRRDGRYFISNGKDQTTKLWDIRKMSSNTTDNSRLRDYDWDYRWMEYPSYARR-LKHPHD 296
S + G + +S +D+T K+WD+ S+ + + +W R + + S + L D
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDV---STGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADD 359
Query: 297 QSLAT--YKGHSVLRTL-IRCYF--SPEYSTAQKYIYTGSSDNSVYIYD 340
++L YK ++TL +F S ++ Y+ TGS D +V +++
Sbjct: 360 KTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 57 (25.1 bits), Expect = 5.8e-07, Sum P(3) = 5.8e-07
Identities = 13/63 (20%), Positives = 30/63 (47%)
Query: 320 YSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIV 379
+ + K+I + + D ++ ++D + + L+ H V +H P +++ S D +
Sbjct: 346 FHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Query: 380 RWE 382
WE
Sbjct: 406 VWE 408
Score = 55 (24.4 bits), Expect = 9.2e-07, Sum P(3) = 9.2e-07
Identities = 13/57 (22%), Positives = 30/57 (52%)
Query: 326 YIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWE 382
++ +GS D ++ ++D+ +G + L H+ VR +H ++S + D + W+
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 39 (18.8 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 34 WKVDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVD 70
+ + G S V F S V+AS+++ IKV++ +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYE 138
Score = 38 (18.4 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 367 PMLISSSWDCNIVRWEI 383
P L+S S D I W++
Sbjct: 309 PFLLSGSRDKTIKMWDV 325
>UNIPROTKB|E2RFS7 [details] [associations]
symbol:ERCC8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0045739 "positive regulation of DNA repair"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032403 "protein complex
binding" evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin ligase
complex" evidence=IEA] [GO:0016363 "nuclear matrix" evidence=IEA]
[GO:0010165 "response to X-ray" evidence=IEA] [GO:0009411 "response
to UV" evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0000109
"nucleotide-excision repair complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009411 GO:GO:0006979 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004842 GO:GO:0016363
GO:GO:0000209 GO:GO:0010165 GO:GO:0045739 GO:GO:0051865
GO:GO:0006283 KO:K10570 GO:GO:0031464 GO:GO:0000109 CTD:1161
GeneTree:ENSGT00390000009065 OMA:TMLRGHY EMBL:AAEX03001458
RefSeq:XP_544353.1 ProteinModelPortal:E2RFS7
Ensembl:ENSCAFT00000011467 GeneID:487225 KEGG:cfa:487225
NextBio:20860845 Uniprot:E2RFS7
Length = 396
Score = 104 (41.7 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 24/78 (30%), Positives = 42/78 (53%)
Query: 316 FSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCC-WHPIYPMLISSSW 374
F+ Y + ++++ +++ +Y + SG Q+ L H V DCC + + L S S
Sbjct: 297 FTVSYGCSSEFVFVPYG-STIAVYTIYSGEQITMLKGHYKSV-DCCVFQSNFQELYSGSR 354
Query: 375 DCNIVRWEIPGIGEAPLP 392
DCNI+ W +P + E P+P
Sbjct: 355 DCNILAW-VPSLYE-PVP 370
Score = 99 (39.9 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 35/130 (26%), Positives = 61/130 (46%)
Query: 156 LVAAGSDN-FIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWD-R 213
LVA G+ + + DL++ CS + H+ ++ V ++ +++ + S DS K+WD R
Sbjct: 158 LVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRCEYVLATASADSRVKLWDVR 217
Query: 214 R---CFIS----KGR-------ANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI 259
R C I+ G+ AN G + G+ F + DG + ++ G D +LW+
Sbjct: 218 RASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTN---DGLHLLTVGTDNRMRLWN- 273
Query: 260 RKMSSNTTDN 269
NT N
Sbjct: 274 SSSGENTLVN 283
Score = 66 (28.3 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 24/75 (32%), Positives = 36/75 (48%)
Query: 152 DGQELVAAGSDNFIYVYDLQANK----------CSL--RIP-AHKSDVNTV-CFADETGH 197
+ + +++ GSD I +YDL+ + CS+ P HK V TV + +TG
Sbjct: 55 EARYMLSGGSDGVIVLYDLENSSRQPYYTCKAVCSVGRNHPDVHKYSVETVQWYPHDTG- 113
Query: 198 LIFSGSDDSLCKVWD 212
+ S S D KVWD
Sbjct: 114 MFTSSSFDKTLKVWD 128
>UNIPROTKB|J9P544 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:J9P544 Ensembl:ENSCAFT00000045166 Uniprot:J9P544
Length = 510
Score = 159 (61.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 59/255 (23%), Positives = 118/255 (46%)
Query: 139 EDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFA-DETGH 197
E+ G++ +++ D +++++ DN I ++D + +C + H V +C DE
Sbjct: 206 ENSKGVYCLQY--DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LCLQYDE--R 259
Query: 198 LIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
+I +GS DS +VWD ++ G L+ H E + + R ++ KD++ +W
Sbjct: 260 VIVTGSSDSTVRVWD----VNTGEVLNTLIHHNEAVLHL--RFSNGLMVTCSKDRSIAVW 313
Query: 258 DIRKMSSNTT------DNSRLRDYDWDYRWMEYPSYARRLKHPHDQS---LATYKGHSVL 308
D+ + T + + D+D +++ S R +K + + T GH
Sbjct: 314 DMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGH--- 370
Query: 309 RTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPM 368
+ I C +Y + + +GSSDN++ ++D+ GA + L+ H VR C
Sbjct: 371 KRGIACL---QYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR--CIRFDNKR 423
Query: 369 LISSSWDCNIVRWEI 383
++S ++D I W++
Sbjct: 424 IVSGAYDGKIKVWDL 438
>UNIPROTKB|B4DH70 [details] [associations]
symbol:FBXW11 "cDNA FLJ54601, highly similar to F-box/WD
repeat protein 11" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AC011410 HOGENOM:HOG000006638
HOVERGEN:HBG002521 OrthoDB:EOG4F1X2M UniGene:Hs.484138
HGNC:HGNC:13607 EMBL:AC011387 EMBL:AC113342 EMBL:AK294956
IPI:IPI01013614 SMR:B4DH70 STRING:B4DH70 Ensembl:ENST00000425623
UCSC:uc011dey.1 Uniprot:B4DH70
Length = 510
Score = 159 (61.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 59/255 (23%), Positives = 118/255 (46%)
Query: 139 EDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFA-DETGH 197
E+ G++ +++ D +++++ DN I ++D + +C + H V +C DE
Sbjct: 206 ENSKGVYCLQY--DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LCLQYDE--R 259
Query: 198 LIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
+I +GS DS +VWD ++ G L+ H E + + R ++ KD++ +W
Sbjct: 260 VIVTGSSDSTVRVWD----VNTGEVLNTLIHHNEAVLHL--RFSNGLMVTCSKDRSIAVW 313
Query: 258 DIRKMSSNTT------DNSRLRDYDWDYRWMEYPSYARRLKHPHDQS---LATYKGHSVL 308
D+ + T + + D+D +++ S R +K + + T GH
Sbjct: 314 DMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGH--- 370
Query: 309 RTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPM 368
+ I C +Y + + +GSSDN++ ++D+ GA + L+ H VR C
Sbjct: 371 KRGIACL---QYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR--CIRFDNKR 423
Query: 369 LISSSWDCNIVRWEI 383
++S ++D I W++
Sbjct: 424 IVSGAYDGKIKVWDL 438
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 155 (59.6 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 52/188 (27%), Positives = 82/188 (43%)
Query: 81 TKALRWTITDTSLSPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDED 140
T+ + W + SPD R +V AS V + D ++RE + + H G
Sbjct: 142 TQHINW-VRCAKFSPDGRLIVSASDDKTVKLWD--KTSRECVHSYCEHGGF--------- 189
Query: 141 EFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIF 200
+ V F G + AAG DN + V+D + ++ H + VN + F +G+ +
Sbjct: 190 ---VTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSF-HPSGNYLI 245
Query: 201 SGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
+ S DS K+ D + +GR L GH T + R G YF S G D+ +W
Sbjct: 246 TASSDSTLKILD----LMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW--- 298
Query: 261 KMSSNTTD 268
K + +T D
Sbjct: 299 KSNFDTVD 306
Score = 143 (55.4 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 57/240 (23%), Positives = 101/240 (42%)
Query: 147 VKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDS 206
V FS + + L + D+ + ++ ++ + R HK V V F+ +GHL+ SGS D
Sbjct: 25 VDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSP-SGHLLASGSRDK 83
Query: 207 LCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRK---MS 263
++W KG + V H + + DG+ ++ D+T K+W + +
Sbjct: 84 TVRIWVPNV---KGEST-VFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTHRQRFLF 139
Query: 264 SNTTDNSRLR--DYDWDYRWMEYPSYARRLK---HPHDQSLATYKGHSVLRTLIRCYFSP 318
S T + +R + D R + S + +K + + +Y H T + F P
Sbjct: 140 SLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD--FHP 197
Query: 319 EYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNI 378
T I DN+V ++D + V H+A V +HP LI++S D +
Sbjct: 198 S-GTC---IAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTL 253
Score = 134 (52.2 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 60/253 (23%), Positives = 104/253 (41%)
Query: 137 GDEDEFGIFSVKFSTDGQELVAAGS-DNFIYVYDLQANKCSLRIPAHKSDVNTVCFADET 195
G +D + V FS G L+A+GS D + ++ S AH + V +V F +
Sbjct: 59 GHKD--AVTCVNFSPSGH-LLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSD- 114
Query: 196 GHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTK 255
G L+ + SDD KVW + R L H+ + DGR +S D+T K
Sbjct: 115 GQLLVTASDDKTVKVWSTH----RQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVK 170
Query: 256 LWDIRKMSSNTTDNSRLRDYDWDYRWMEY-PSYARRLKHPHDQSLATY--KGHSVLR--T 310
LWD K S + ++ ++++ PS D ++ + + H +++
Sbjct: 171 LWD--KTSRECVHS--YCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQ 226
Query: 311 LIRCYFSP-EYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPML 369
L + + + Y+ T SSD+++ I DL+ G + L H P +
Sbjct: 227 LHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYF 286
Query: 370 ISSSWDCNIVRWE 382
S D ++ W+
Sbjct: 287 ASGGSDEQVMVWK 299
>UNIPROTKB|E2RTE4 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:E2RTE4 Ensembl:ENSCAFT00000026749 Uniprot:E2RTE4
Length = 529
Score = 159 (61.0 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 59/255 (23%), Positives = 118/255 (46%)
Query: 139 EDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFA-DETGH 197
E+ G++ +++ D +++++ DN I ++D + +C + H V +C DE
Sbjct: 225 ENSKGVYCLQY--DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LCLQYDE--R 278
Query: 198 LIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
+I +GS DS +VWD ++ G L+ H E + + R ++ KD++ +W
Sbjct: 279 VIVTGSSDSTVRVWD----VNTGEVLNTLIHHNEAVLHL--RFSNGLMVTCSKDRSIAVW 332
Query: 258 DIRKMSSNTT------DNSRLRDYDWDYRWMEYPSYARRLKHPHDQS---LATYKGHSVL 308
D+ + T + + D+D +++ S R +K + + T GH
Sbjct: 333 DMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGH--- 389
Query: 309 RTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPM 368
+ I C +Y + + +GSSDN++ ++D+ GA + L+ H VR C
Sbjct: 390 KRGIACL---QYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR--CIRFDNKR 442
Query: 369 LISSSWDCNIVRWEI 383
++S ++D I W++
Sbjct: 443 IVSGAYDGKIKVWDL 457
>UNIPROTKB|F1MLG0 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:DAAA02049882
EMBL:DAAA02049883 IPI:IPI00699126 Ensembl:ENSBTAT00000061118
Uniprot:F1MLG0
Length = 530
Score = 159 (61.0 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 59/255 (23%), Positives = 118/255 (46%)
Query: 139 EDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFA-DETGH 197
E+ G++ +++ D +++++ DN I ++D + +C + H V +C DE
Sbjct: 226 ENSKGVYCLQY--DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LCLQYDE--R 279
Query: 198 LIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
+I +GS DS +VWD ++ G L+ H E + + R ++ KD++ +W
Sbjct: 280 VIVTGSSDSTVRVWD----VNTGEVLNTLIHHNEAVLHL--RFSNGLMVTCSKDRSIAVW 333
Query: 258 DIRKMSSNTT------DNSRLRDYDWDYRWMEYPSYARRLKHPHDQS---LATYKGHSVL 308
D+ + T + + D+D +++ S R +K + + T GH
Sbjct: 334 DMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGH--- 390
Query: 309 RTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPM 368
+ I C +Y + + +GSSDN++ ++D+ GA + L+ H VR C
Sbjct: 391 KRGIACL---QYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR--CIRFDNKR 443
Query: 369 LISSSWDCNIVRWEI 383
++S ++D I W++
Sbjct: 444 IVSGAYDGKIKVWDL 458
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 154 (59.3 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 57/243 (23%), Positives = 103/243 (42%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
+ SV FS + ++L + D+ + V+ ++ + R HK V V F+ +GHL+ SGS
Sbjct: 22 VTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSP-SGHLLASGS 80
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMS 263
D ++W KG + V H + + DG+ F++ D+T K+W +
Sbjct: 81 RDKTVRIWVPNV---KGEST-VFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQK 136
Query: 264 -----SNTTDNSRLRDYDWDYRWMEYPSYARRLK---HPHDQSLATYKGHSVLRTLIRCY 315
S + R + D R + S + +K + + +Y H T +
Sbjct: 137 FLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD-- 194
Query: 316 FSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWD 375
F P T I DN+V ++D+ + + H+A V +HP L+++S D
Sbjct: 195 FHPS-GTC---IAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSD 250
Query: 376 CNI 378
+
Sbjct: 251 STL 253
Score = 150 (57.9 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 48/174 (27%), Positives = 76/174 (43%)
Query: 84 LRWTITDTSLSPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFG 143
+ W + SPD R +V AS V + D ++RE + + H G
Sbjct: 145 INW-VRCAKFSPDGRLIVSASDDKTVKLWD--KTSRECVHSYCEHGGF------------ 189
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
+ V F G + AAG DN + V+D++ ++ H + VN + F +G+ + + S
Sbjct: 190 VTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSF-HPSGNYLVTAS 248
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
DS K+ D + +GR L GH T + R G YF S G D+ +W
Sbjct: 249 SDSTLKILD----LMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 48 (22.0 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 10/49 (20%), Positives = 21/49 (42%)
Query: 19 DSCHVLSRYLPVNGPWKVDGMNSRVYTSQFSNDGSFFVAASQESNIKVY 67
DSC ++ P ++ G V FS G + S++ ++++
Sbjct: 40 DSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIW 88
>UNIPROTKB|F1PBF1 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 KO:K03362 GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AAEX03003014 RefSeq:XP_866627.1
ProteinModelPortal:F1PBF1 Ensembl:ENSCAFT00000026752 GeneID:479291
KEGG:cfa:479291 Uniprot:F1PBF1
Length = 542
Score = 159 (61.0 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 59/255 (23%), Positives = 118/255 (46%)
Query: 139 EDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFA-DETGH 197
E+ G++ +++ D +++++ DN I ++D + +C + H V +C DE
Sbjct: 238 ENSKGVYCLQY--DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LCLQYDE--R 291
Query: 198 LIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
+I +GS DS +VWD ++ G L+ H E + + R ++ KD++ +W
Sbjct: 292 VIVTGSSDSTVRVWD----VNTGEVLNTLIHHNEAVLHL--RFSNGLMVTCSKDRSIAVW 345
Query: 258 DIRKMSSNTT------DNSRLRDYDWDYRWMEYPSYARRLKHPHDQS---LATYKGHSVL 308
D+ + T + + D+D +++ S R +K + + T GH
Sbjct: 346 DMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGH--- 402
Query: 309 RTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPM 368
+ I C +Y + + +GSSDN++ ++D+ GA + L+ H VR C
Sbjct: 403 KRGIACL---QYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR--CIRFDNKR 455
Query: 369 LISSSWDCNIVRWEI 383
++S ++D I W++
Sbjct: 456 IVSGAYDGKIKVWDL 470
>UNIPROTKB|Q9UKB1 [details] [associations]
symbol:FBXW11 "F-box/WD repeat-containing protein 11"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;NAS] [GO:0016567
"protein ubiquitination" evidence=IDA;NAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006470 "protein
dephosphorylation" evidence=ISS] [GO:0042753 "positive regulation
of circadian rhythm" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0045862 "positive regulation of proteolysis"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005829
"cytosol" evidence=ISS;TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 Reactome:REACT_6900
GO:GO:0045892 GO:GO:0045893
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0000209
Pathway_Interaction_DB:hdac_classi_pathway
Pathway_Interaction_DB:nfkappabatypicalpathway
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753 HOGENOM:HOG000006638
HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M EMBL:AF176022
EMBL:AB033279 EMBL:AB033280 EMBL:AB033281 EMBL:AB014596
EMBL:AK314999 EMBL:BC026213 IPI:IPI00301283 IPI:IPI00306671
IPI:IPI00328796 RefSeq:NP_036432.2 RefSeq:NP_387448.2
RefSeq:NP_387449.2 UniGene:Hs.484138 ProteinModelPortal:Q9UKB1
SMR:Q9UKB1 DIP:DIP-27593N IntAct:Q9UKB1 MINT:MINT-120522
STRING:Q9UKB1 PhosphoSite:Q9UKB1 DMDM:13124267 PRIDE:Q9UKB1
DNASU:23291 Ensembl:ENST00000265094 Ensembl:ENST00000296933
Ensembl:ENST00000393802 GeneID:23291 KEGG:hsa:23291 UCSC:uc003mbl.1
UCSC:uc003mbm.1 UCSC:uc003mbn.1 CTD:23291 GeneCards:GC05M171288
HGNC:HGNC:13607 MIM:605651 neXtProt:NX_Q9UKB1 PharmGKB:PA28050
InParanoid:Q9UKB1 OMA:FDQWSEA PhylomeDB:Q9UKB1
Pathway_Interaction_DB:nfkappabalternativepathway GenomeRNAi:23291
NextBio:45108 ArrayExpress:Q9UKB1 Bgee:Q9UKB1 CleanEx:HS_FBXW11
Genevestigator:Q9UKB1 GermOnline:ENSG00000072803 Uniprot:Q9UKB1
Length = 542
Score = 159 (61.0 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 59/255 (23%), Positives = 118/255 (46%)
Query: 139 EDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFA-DETGH 197
E+ G++ +++ D +++++ DN I ++D + +C + H V +C DE
Sbjct: 238 ENSKGVYCLQY--DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LCLQYDE--R 291
Query: 198 LIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
+I +GS DS +VWD ++ G L+ H E + + R ++ KD++ +W
Sbjct: 292 VIVTGSSDSTVRVWD----VNTGEVLNTLIHHNEAVLHL--RFSNGLMVTCSKDRSIAVW 345
Query: 258 DIRKMSSNTT------DNSRLRDYDWDYRWMEYPSYARRLKHPHDQS---LATYKGHSVL 308
D+ + T + + D+D +++ S R +K + + T GH
Sbjct: 346 DMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGH--- 402
Query: 309 RTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPM 368
+ I C +Y + + +GSSDN++ ++D+ GA + L+ H VR C
Sbjct: 403 KRGIACL---QYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR--CIRFDNKR 455
Query: 369 LISSSWDCNIVRWEI 383
++S ++D I W++
Sbjct: 456 IVSGAYDGKIKVWDL 470
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 138 (53.6 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 42/181 (23%), Positives = 79/181 (43%)
Query: 116 SSARESLANVTIHKGLDF--SADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQAN 173
S++ ++ V H+ DF + G D + + F G+ L + +D I ++D Q
Sbjct: 125 SASEDATIKVWDHETGDFERTLKGHTDS--VQDISFDHTGKLLASCSADMTIKLWDFQGF 182
Query: 174 KCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGI 233
+C + H +V++V H++ S S D K+W+ ++ G GH E +
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWE----VATGYCVKTFTGHREWV 237
Query: 234 TFIDSRRDGRYFISNGKDQTTKLWDIRKMSSNTTDNSRLRDYDWDYRWMEYPSYARRLKH 293
+ +DG S+ DQT ++W + + LR+++ +E S+A H
Sbjct: 238 RMVRPNQDGTLIASSSNDQTVRVWVVATKECK----AELREHE---HVVECISWAPESAH 290
Query: 294 P 294
P
Sbjct: 291 P 291
Score = 118 (46.6 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 30/113 (26%), Positives = 50/113 (44%)
Query: 148 KFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSL 207
K G L++ D I ++D+ C + + H + V V G I S +DD
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGV-LVHPGGKYIVSCADDKT 361
Query: 208 CKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
++WD + +K R L H +T +D + Y ++ DQT K+W+ R
Sbjct: 362 LRIWDYK---NK-RCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 116 (45.9 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 28/104 (26%), Positives = 49/104 (47%)
Query: 156 LVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRC 215
+V+A D I V+D + + H V + F D TG L+ S S D K+WD +
Sbjct: 123 IVSASEDATIKVWDHETGDFERTLKGHTDSVQDISF-DHTGKLLASCSADMTIKLWDFQG 181
Query: 216 FISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI 259
F + GH ++ + +G + +S +D+T K+W++
Sbjct: 182 F----ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 99 (39.9 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 26/82 (31%), Positives = 35/82 (42%)
Query: 179 IPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDS 238
+ H+S V V F +I S S+D+ KVWD G L GH + + I
Sbjct: 104 LSGHRSPVTRVIF-HPVFSVIVSASEDATIKVWDHET----GDFERTLKGHTDSVQDISF 158
Query: 239 RRDGRYFISNGKDQTTKLWDIR 260
G+ S D T KLWD +
Sbjct: 159 DHTGKLLASCSADMTIKLWDFQ 180
Score = 59 (25.8 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 15/58 (25%), Positives = 26/58 (44%)
Query: 325 KYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWE 382
KYI + + D ++ I+D + L H V +H P +++ S D + WE
Sbjct: 351 KYIVSCADDKTLRIWDYKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 58 (25.5 bits), Expect = 2.4e-08, Sum P(3) = 2.4e-08
Identities = 19/93 (20%), Positives = 41/93 (44%)
Query: 292 KHPHDQSLATYKGHSVLRTLIRCYFSPEYSTAQK--YIYTGSSDNSVYIYDLVSGAQVAK 349
+H H ++ S T++ S + + ++ +GS D ++ ++D+ G +
Sbjct: 274 EHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMT 333
Query: 350 LDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWE 382
L H+ VR HP ++S + D + W+
Sbjct: 334 LVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWD 366
Score = 39 (18.8 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 367 PMLISSSWDCNIVRWEIPGIG 387
P L+S S D I W++ IG
Sbjct: 309 PFLLSGSRDKTIKMWDV-SIG 328
Score = 38 (18.4 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 34 WKVDGMNSRVYTSQFSNDGSFFVAASQESNIKVYN 68
+ + G S V F S V+AS+++ IKV++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWD 136
>UNIPROTKB|B3KPU1 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246 EMBL:AC009488
HOGENOM:HOG000176356 HOVERGEN:HBG000188 UniGene:Hs.185172
HGNC:HGNC:4398 EMBL:AK056750 IPI:IPI00924758 SMR:B3KPU1
STRING:B3KPU1 Ensembl:ENST00000419828 Ensembl:ENST00000427895
Uniprot:B3KPU1
Length = 240
Score = 150 (57.9 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 58/246 (23%), Positives = 102/246 (41%)
Query: 149 FSTDGQELVAAGSDNFIYVYDLQANKCSLRI----PAHKSDVNTVCFADETGHLIFSGSD 204
++ G + G DN +Y L+ + ++R+ P H ++ F D+ + I + S
Sbjct: 5 YAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDD--NQIITSSG 62
Query: 205 DSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR-KMS 263
D+ C +WD I G+ GH + + DGR F+S D + KLWD+R M
Sbjct: 63 DTTCALWD----IETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMC 118
Query: 264 SNT-----TDNSRLRDYDWDYRWMEYPSYA--RRLKHPHDQSLATYKGHSVLRTLIRCYF 316
T +D + + + Y + A R DQ L Y +++ +
Sbjct: 119 RQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGIT---- 174
Query: 317 SPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISS-SWD 375
S +S + + + G D + I+D + G + L H+ V C M +++ SWD
Sbjct: 175 SVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRV-SCLGVTDDGMAVATGSWD 233
Query: 376 CNIVRW 381
+ W
Sbjct: 234 SFLKIW 239
Score = 135 (52.6 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 33/121 (27%), Positives = 58/121 (47%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
+ S+ + DG+ V+ D I ++D++ + C H+SD+N V F G+ +GS
Sbjct: 87 VMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPN-GYAFTTGS 145
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGH---LEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
DD+ C+++D R ++ H + GIT + R GR ++ D +WD
Sbjct: 146 DDATCRLFDLRA-----DQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAM 200
Query: 261 K 261
K
Sbjct: 201 K 201
Score = 116 (45.9 bits), Expect = 0.00022, P = 0.00022
Identities = 33/121 (27%), Positives = 56/121 (46%)
Query: 141 EFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKS---DVNTVCFADETGH 197
E I +V F +G D ++DL+A++ L + +H + + +V F+ +G
Sbjct: 126 ESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQ-ELLMYSHDNIICGITSVAFS-RSGR 183
Query: 198 LIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
L+ +G DD C +WD KG GVL GH ++ + DG + D K+W
Sbjct: 184 LLLAGYDDFNCNIWDAM----KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 239
Query: 258 D 258
+
Sbjct: 240 N 240
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 158 (60.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 59/255 (23%), Positives = 117/255 (45%)
Query: 139 EDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFA-DETGH 197
E+ G++ +++ D ++++ DN I ++D + +C + H V +C DE
Sbjct: 189 ENSKGVYCLQYDDD--KIISGLRDNSIKIWDKSSLECLKVLTGHTGSV--LCLQYDE--R 242
Query: 198 LIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
+I +GS DS +VWD ++ G L+ H E + + R ++ KD++ +W
Sbjct: 243 VIVTGSSDSTVRVWD----VNTGEVLNTLIHHNEAVLHL--RFSNGLMVTCSKDRSIAVW 296
Query: 258 DIRKMSSNTT------DNSRLRDYDWDYRWMEYPSYARRLKHPHDQS---LATYKGHSVL 308
D+ + T + + D+D +++ S R +K + + T GH
Sbjct: 297 DMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGH--- 353
Query: 309 RTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPM 368
+ I C +Y + + +GSSDN++ ++D+ GA + L+ H VR C
Sbjct: 354 KRGIACL---QYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR--CIRFDNKR 406
Query: 369 LISSSWDCNIVRWEI 383
++S ++D I W++
Sbjct: 407 IVSGAYDGKIKVWDL 421
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 158 (60.7 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 36/114 (31%), Positives = 59/114 (51%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
I+S+ FS +G + DN V+DL+ +C IPAH++ V++V F GH + +G+
Sbjct: 395 IYSINFSPNGFHVATGSGDNACKVWDLRQRRCIYTIPAHQNLVSSVKFQPNDGHYLLTGA 454
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
D+ K+W + S + L GH + +D DG+ + D+T KLW
Sbjct: 455 YDNTAKIWTHPGW-SPLKT---LAGHEGKVMGVDLSPDGQLIATCSYDRTFKLW 504
Score = 149 (57.5 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 32/116 (27%), Positives = 57/116 (49%)
Query: 143 GIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSG 202
G+ + F DG G D+F V+DL+ +C + + H ++ ++ F+ H + +G
Sbjct: 352 GVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVMFLEGHIKEIYSINFSPNGFH-VATG 410
Query: 203 SDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSR-RDGRYFISNGKDQTTKLW 257
S D+ CKVWD R + R + H ++ + + DG Y ++ D T K+W
Sbjct: 411 SGDNACKVWDLR----QRRCIYTIPAHQNLVSSVKFQPNDGHYLLTGAYDNTAKIW 462
>UNIPROTKB|F1P5E8 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AADN02035964
EMBL:AADN02035965 EMBL:AADN02035966 IPI:IPI00735168
Ensembl:ENSGALT00000003489 ArrayExpress:F1P5E8 Uniprot:F1P5E8
Length = 515
Score = 158 (60.7 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 59/255 (23%), Positives = 118/255 (46%)
Query: 139 EDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFA-DETGH 197
E+ G++ +++ D +++++ DN I ++D + +C + H V +C DE
Sbjct: 211 ENSKGVYCLQY--DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LCLQYDE--R 264
Query: 198 LIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
+I +GS DS +VWD ++ G L+ H E + + R ++ KD++ +W
Sbjct: 265 VIVTGSSDSTVRVWD----VNTGEVLNTLIHHNEAVLHL--RFSNGLMVTCSKDRSIAVW 318
Query: 258 DIRKMSSNTT------DNSRLRDYDWDYRWMEYPSYARRLKHPHDQS---LATYKGHSVL 308
D+ + T + + D+D +++ S R +K + + T GH
Sbjct: 319 DMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGH--- 375
Query: 309 RTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPM 368
+ I C +Y + + +GSSDN++ ++D+ GA + L+ H VR C
Sbjct: 376 KRGIACL---QYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR--CIRFDNKR 428
Query: 369 LISSSWDCNIVRWEI 383
++S ++D I W++
Sbjct: 429 IVSGAYDGKIKVWDL 443
>WB|WBGene00003009 [details] [associations]
symbol:lin-23 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0008285 GO:GO:0051301 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0040011 GO:GO:0048812 SUPFAM:SSF81383
GO:GO:0007049 GO:GO:0040035 GO:GO:0040015 EMBL:FO080748
HOGENOM:HOG000006638 KO:K03362 GeneTree:ENSGT00690000101849
EMBL:AF275253 PIR:T16607 RefSeq:NP_495285.1 UniGene:Cel.17632
ProteinModelPortal:Q09990 SMR:Q09990 STRING:Q09990 PaxDb:Q09990
EnsemblMetazoa:K10B2.1 GeneID:174058 KEGG:cel:CELE_K10B2.1
UCSC:K10B2.1 CTD:174058 WormBase:K10B2.1 InParanoid:Q09990
OMA:IKVWSMD NextBio:882327 Uniprot:Q09990
Length = 665
Score = 161 (61.7 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 62/254 (24%), Positives = 117/254 (46%)
Query: 139 EDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHL 198
E+ G++ +++ D ++V+ DN I ++D + CS + H V +C + +
Sbjct: 220 ENSKGVYCLQYDDD--KIVSGLRDNTIKIWDRKDYSCSRILSGHTGSV--LCLQYDN-RV 274
Query: 199 IFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWD 258
I SGS D+ +VWD + G L+ H E + + R ++ KD++ +WD
Sbjct: 275 IISGSSDATVRVWD----VETGECIKTLIHHCEAVLHL--RFANGIMVTCSKDRSIAVWD 328
Query: 259 I---RKMSSNTT---DNSRLRDYDWDYRWMEYPSYARRLK-HPHD--QSLATYKGHSVLR 309
+ R ++ + + D+D R++ S R +K D + + T GH R
Sbjct: 329 MVSPRDITIRRVLVGHRAAVNVVDFDDRYIVSASGDRTIKVWSMDTLEFVRTLAGH---R 385
Query: 310 TLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPML 369
I C +Y + + +GSSDN++ ++D+ SG + L+ H VR C +
Sbjct: 386 RGIACL---QYRG--RLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVR--CIRFDEKRI 438
Query: 370 ISSSWDCNIVRWEI 383
+S ++D I W++
Sbjct: 439 VSGAYDGKIKVWDL 452
Score = 42 (19.8 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 5/9 (55%), Positives = 8/9 (88%)
Query: 66 VYNVDKNWK 74
++N+D NWK
Sbjct: 198 IHNIDNNWK 206
>UNIPROTKB|Q09990 [details] [associations]
symbol:lin-23 "F-box/WD repeat-containing protein lin-23"
species:6239 "Caenorhabditis elegans" [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0008285
GO:GO:0051301 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010171 GO:GO:0040011
GO:GO:0048812 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0040035
GO:GO:0040015 EMBL:FO080748 HOGENOM:HOG000006638 KO:K03362
GeneTree:ENSGT00690000101849 EMBL:AF275253 PIR:T16607
RefSeq:NP_495285.1 UniGene:Cel.17632 ProteinModelPortal:Q09990
SMR:Q09990 STRING:Q09990 PaxDb:Q09990 EnsemblMetazoa:K10B2.1
GeneID:174058 KEGG:cel:CELE_K10B2.1 UCSC:K10B2.1 CTD:174058
WormBase:K10B2.1 InParanoid:Q09990 OMA:IKVWSMD NextBio:882327
Uniprot:Q09990
Length = 665
Score = 161 (61.7 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 62/254 (24%), Positives = 117/254 (46%)
Query: 139 EDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHL 198
E+ G++ +++ D ++V+ DN I ++D + CS + H V +C + +
Sbjct: 220 ENSKGVYCLQYDDD--KIVSGLRDNTIKIWDRKDYSCSRILSGHTGSV--LCLQYDN-RV 274
Query: 199 IFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWD 258
I SGS D+ +VWD + G L+ H E + + R ++ KD++ +WD
Sbjct: 275 IISGSSDATVRVWD----VETGECIKTLIHHCEAVLHL--RFANGIMVTCSKDRSIAVWD 328
Query: 259 I---RKMSSNTT---DNSRLRDYDWDYRWMEYPSYARRLK-HPHD--QSLATYKGHSVLR 309
+ R ++ + + D+D R++ S R +K D + + T GH R
Sbjct: 329 MVSPRDITIRRVLVGHRAAVNVVDFDDRYIVSASGDRTIKVWSMDTLEFVRTLAGH---R 385
Query: 310 TLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPML 369
I C +Y + + +GSSDN++ ++D+ SG + L+ H VR C +
Sbjct: 386 RGIACL---QYRG--RLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVR--CIRFDEKRI 438
Query: 370 ISSSWDCNIVRWEI 383
+S ++D I W++
Sbjct: 439 VSGAYDGKIKVWDL 452
Score = 42 (19.8 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 5/9 (55%), Positives = 8/9 (88%)
Query: 66 VYNVDKNWK 74
++N+D NWK
Sbjct: 198 IHNIDNNWK 206
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 158 (60.7 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 59/255 (23%), Positives = 117/255 (45%)
Query: 139 EDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFA-DETGH 197
E+ G++ +++ D ++++ DN I ++D + +C + H V +C DE
Sbjct: 223 ENSKGVYCLQYDDD--KIISGLRDNSIKIWDKSSLECLKVLTGHTGSV--LCLQYDE--R 276
Query: 198 LIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
+I +GS DS +VWD ++ G L+ H E + + R ++ KD++ +W
Sbjct: 277 VIVTGSSDSTVRVWD----VNTGEVLNTLIHHNEAVLHL--RFSNGLMVTCSKDRSIAVW 330
Query: 258 DIRKMSSNTT------DNSRLRDYDWDYRWMEYPSYARRLKHPHDQS---LATYKGHSVL 308
D+ + T + + D+D +++ S R +K + + T GH
Sbjct: 331 DMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGH--- 387
Query: 309 RTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPM 368
+ I C +Y + + +GSSDN++ ++D+ GA + L+ H VR C
Sbjct: 388 KRGIACL---QYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR--CIRFDNKR 440
Query: 369 LISSSWDCNIVRWEI 383
++S ++D I W++
Sbjct: 441 IVSGAYDGKIKVWDL 455
>DICTYBASE|DDB_G0275323 [details] [associations]
symbol:tipD "autophagy protein 16" species:44689
"Dictyostelium discoideum" [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0031154 "culmination involved in sorocarp
development" evidence=IMP] [GO:0034274 "Atg12-Atg5-Atg16 complex"
evidence=ISS] [GO:0019776 "Atg8 ligase activity" evidence=ISS]
[GO:0016236 "macroautophagy" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275323
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013923 Pfam:PF08614 OMA:LETECQE
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0031154
GO:GO:0016236 GO:GO:0034274 GO:GO:0019776 EMBL:AF019236 PIR:T08602
RefSeq:XP_643673.1 ProteinModelPortal:O15736 STRING:O15736
EnsemblProtists:DDB0215341 GeneID:8619939 KEGG:ddi:DDB_G0275323
ProtClustDB:CLSZ2729185 Uniprot:O15736
Length = 612
Score = 147 (56.8 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 61/255 (23%), Positives = 101/255 (39%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
I SV FS + + ++ +DN +++ + + + H V T F + + + +GS
Sbjct: 369 IVSVSFSPNDESILGTSNDNSARLWNTELGRSRHTLTGHIGKVYTGKFINS--NRVVTGS 426
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMS 263
D K+WD + KG + + G + S D + + WD
Sbjct: 427 HDRTIKLWD----LQKGYCTRTIFCFSSCNDLVILGGSGTHLASGHVDHSVRFWD-SNAG 481
Query: 264 SNTTDNSRLRDYDWDYRWMEYPSYARRLKHPHDQSLATYKGHSVLRTL--IRCYFSPEY- 320
T S + + + + L + D +L +RT IR + PEY
Sbjct: 482 EPTQVLSSIHEGQITSITNSPTNTNQILTNSRDHTLKIID----IRTFDTIRTFKDPEYR 537
Query: 321 ----------STAQKYIYTGSSDNSVYIYDLVSGAQVAKLD-FHNAPVRDCC--WHPIYP 367
S +YI +GS D S+ I+D +G V L HN CC W P+
Sbjct: 538 NGLNWTKASWSPDGRYIASGSIDGSICIWDATNGKTVKVLTKVHNNGSSVCCCSWSPLAN 597
Query: 368 MLISSSWDCNIVRWE 382
+ IS+ D NI++WE
Sbjct: 598 IFISADKDKNIIQWE 612
Score = 56 (24.8 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 19/77 (24%), Positives = 33/77 (42%)
Query: 28 LPVNGPWKVDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWT 87
LP + G NS +Y F++ G+ + +KV++V QK A + +
Sbjct: 312 LPSKAKKRWTGHNSEIYCMAFNSIGNLLATGGGDKCVKVWDVISGQ--QKSTLLGASQ-S 368
Query: 88 ITDTSLSPDQRFLVYAS 104
I S SP+ ++ S
Sbjct: 369 IVSVSFSPNDESILGTS 385
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 158 (60.7 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 59/255 (23%), Positives = 117/255 (45%)
Query: 139 EDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFA-DETGH 197
E+ G++ +++ D ++++ DN I ++D + +C + H V +C DE
Sbjct: 238 ENSKGVYCLQYDDD--KIISGLRDNSIKIWDKSSLECLKVLTGHTGSV--LCLQYDE--R 291
Query: 198 LIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
+I +GS DS +VWD ++ G L+ H E + + R ++ KD++ +W
Sbjct: 292 VIVTGSSDSTVRVWD----VNTGEVLNTLIHHNEAVLHL--RFSNGLMVTCSKDRSIAVW 345
Query: 258 DIRKMSSNTT------DNSRLRDYDWDYRWMEYPSYARRLKHPHDQS---LATYKGHSVL 308
D+ + T + + D+D +++ S R +K + + T GH
Sbjct: 346 DMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGH--- 402
Query: 309 RTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPM 368
+ I C +Y + + +GSSDN++ ++D+ GA + L+ H VR C
Sbjct: 403 KRGIACL---QYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR--CIRFDNKR 455
Query: 369 LISSSWDCNIVRWEI 383
++S ++D I W++
Sbjct: 456 IVSGAYDGKIKVWDL 470
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 156 (60.0 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 60/236 (25%), Positives = 108/236 (45%)
Query: 156 LVAAGS-DNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRR 214
LVA GS D ++D+Q + + H +++ ++ F + +G I +GS D VWD
Sbjct: 191 LVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSF-NTSGDRIITGSFDHTVVVWDA- 248
Query: 215 CFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRK---MSSNTTDNSR 271
GR +L+GH I+ D ++ D+T KLWD +++ T +
Sbjct: 249 ---DTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDE 305
Query: 272 LRDYDWDY--RWMEYPSY---ARRLKHPHDQSLATYKGHSVLRTLIRCYFSPEYSTAQKY 326
+ D +DY + + S AR + +A +GH + + F+P+ + +
Sbjct: 306 ILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHE--GEISKISFNPQGN----H 359
Query: 327 IYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWD--CNIVR 380
+ TGSSD + I+D +G + L+ H + C ++ ++I+ S D C I R
Sbjct: 360 LLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIWR 415
Score = 149 (57.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 56/248 (22%), Positives = 106/248 (42%)
Query: 144 IFSVKFSTDGQELVAAGS-DNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSG 202
++++ F+ + +A GS D ++ ++ KC H +++ + F ++ L+ +G
Sbjct: 137 VYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQST-LVATG 195
Query: 203 SDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI--- 259
S D+ K+WD I G L GH I + G I+ D T +WD
Sbjct: 196 SMDTTAKLWD----IQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTG 251
Query: 260 RKMSSNTTDNSRLRD--YDWDYRWMEYPSYARRLK---HPHDQSLATYKGHSVLRTLIRC 314
RK++ + + ++WD + S + K + + +AT GH L C
Sbjct: 252 RKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDD-EILDSC 310
Query: 315 YFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSW 374
+ +Y+ K I T S+D + I+ + +AKL+ H + ++P L++ S
Sbjct: 311 F---DYTG--KLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSS 365
Query: 375 DCNIVRWE 382
D W+
Sbjct: 366 DKTARIWD 373
Score = 141 (54.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 50/236 (21%), Positives = 93/236 (39%)
Query: 146 SVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDD 205
+V + G + D ++D + + + H++ V + F + G I +GS D
Sbjct: 97 NVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFD 156
Query: 206 SLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSSN 265
CK+W + G+ GH I + + D T KLWDI+ N
Sbjct: 157 KTCKLWS----VETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQ----N 208
Query: 266 TTDNSRLRDYDWDYRWMEYPSYARRL-KHPHDQSLATYKGHSVLRTLIRCYFSPEYSTAQ 324
+ LR + + + + + R+ D ++ + + + I E S+A
Sbjct: 209 GEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSAS 268
Query: 325 -----KYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWD 375
I TGS D + ++D +G VA L H+ + D C+ ++ ++S D
Sbjct: 269 FNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASAD 324
Score = 137 (53.3 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 31/121 (25%), Positives = 55/121 (45%)
Query: 137 GDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETG 196
G +DE I F G+ + A +D ++ KC ++ H+ +++ + F +
Sbjct: 301 GHDDE--ILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGN 358
Query: 197 HLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKL 256
HL+ +GS D ++WD + G+ VL GH + I G I+ KD T ++
Sbjct: 359 HLL-TGSSDKTARIWDAQT----GQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRI 413
Query: 257 W 257
W
Sbjct: 414 W 414
>UNIPROTKB|F1P8Q5 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9615 "Canis lupus
familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:NMCSIYS EMBL:AAEX03015272
ProteinModelPortal:F1P8Q5 Ensembl:ENSCAFT00000023270 Uniprot:F1P8Q5
Length = 340
Score = 154 (59.3 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 58/251 (23%), Positives = 101/251 (40%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQAN----KCSLRIPAHKSDVNTVCFADETGHLI 199
+ + ++ G + G DN +Y L++ K S + AH ++ F D+ I
Sbjct: 100 VMTCAYAPSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNN--I 157
Query: 200 FSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI 259
+ S D+ C +WD I G+ V +GH + D + FIS D + KLWD+
Sbjct: 158 VTSSGDTTCALWD----IETGQQKTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDV 213
Query: 260 RKMSSNTTDNSRLRDYDWDYRWMEYPSYA--------RRLKHPHDQSLATYKGHSVLRTL 311
R+ + T D + + + R DQ L Y S++ +
Sbjct: 214 REGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSDESIICGI 273
Query: 312 IRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLIS 371
S +S + + ++ G D + I+D + G +V L H+ V C M ++
Sbjct: 274 T----SVAFSLSGRLLFAGYDDFNCNIWDSMKGERVGILSGHDNRV-SCLGVTADGMAVA 328
Query: 372 S-SWDCNIVRW 381
+ SWD + W
Sbjct: 329 TGSWDSFLKVW 339
Score = 115 (45.5 bits), Expect = 0.00063, P = 0.00063
Identities = 32/121 (26%), Positives = 58/121 (47%)
Query: 141 EFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKS---DVNTVCFADETGH 197
E I ++ F +G+ + D ++DL+A++ L + +S + +V F+ +G
Sbjct: 226 ESDINAICFFPNGEAICTGSDDASCRLFDLRADQ-ELTAYSDESIICGITSVAFS-LSGR 283
Query: 198 LIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
L+F+G DD C +WD KG G+L GH ++ + DG + D K+W
Sbjct: 284 LLFAGYDDFNCNIWDSM----KGERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKVW 339
Query: 258 D 258
+
Sbjct: 340 N 340
Score = 114 (45.2 bits), Expect = 0.00082, P = 0.00082
Identities = 35/126 (27%), Positives = 56/126 (44%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
I+++ ++TD + LV+A D + V+D IP S V T +A +G+ + G
Sbjct: 58 IYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAP-SGNFVACGG 116
Query: 204 DDSLCKVWD---RRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
D++C ++ R + R G+L F+D D S+G D T LWDI
Sbjct: 117 LDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLD---DNNIVTSSG-DTTCALWDIE 172
Query: 261 KMSSNT 266
T
Sbjct: 173 TGQQKT 178
>UNIPROTKB|P79147 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9615 "Canis lupus
familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U52916 EMBL:AY751537 EMBL:DQ672621
RefSeq:NP_001003004.1 UniGene:Cfa.5 ProteinModelPortal:P79147
SMR:P79147 PRIDE:P79147 GeneID:403511 KEGG:cfa:403511 CTD:2784
eggNOG:NOG269251 KO:K07825 NextBio:20817024 Uniprot:P79147
Length = 340
Score = 154 (59.3 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 58/251 (23%), Positives = 101/251 (40%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQAN----KCSLRIPAHKSDVNTVCFADETGHLI 199
+ + ++ G + G DN +Y L++ K S + AH ++ F D+ I
Sbjct: 100 VMTCAYAPSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNN--I 157
Query: 200 FSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI 259
+ S D+ C +WD I G+ V +GH + D + FIS D + KLWD+
Sbjct: 158 VTSSGDTTCALWD----IETGQQKTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDV 213
Query: 260 RKMSSNTTDNSRLRDYDWDYRWMEYPSYA--------RRLKHPHDQSLATYKGHSVLRTL 311
R+ + T D + + + R DQ L Y S++ +
Sbjct: 214 REGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSDESIICGI 273
Query: 312 IRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLIS 371
S +S + + ++ G D + I+D + G +V L H+ V C M ++
Sbjct: 274 T----SVAFSLSGRLLFAGYDDFNCNIWDSMKGERVGILSGHDNRV-SCLGVTADGMAVA 328
Query: 372 S-SWDCNIVRW 381
+ SWD + W
Sbjct: 329 TGSWDSFLKVW 339
Score = 115 (45.5 bits), Expect = 0.00063, P = 0.00063
Identities = 32/121 (26%), Positives = 58/121 (47%)
Query: 141 EFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKS---DVNTVCFADETGH 197
E I ++ F +G+ + D ++DL+A++ L + +S + +V F+ +G
Sbjct: 226 ESDINAICFFPNGEAICTGSDDASCRLFDLRADQ-ELTAYSDESIICGITSVAFS-LSGR 283
Query: 198 LIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
L+F+G DD C +WD KG G+L GH ++ + DG + D K+W
Sbjct: 284 LLFAGYDDFNCNIWDSM----KGERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKVW 339
Query: 258 D 258
+
Sbjct: 340 N 340
Score = 114 (45.2 bits), Expect = 0.00082, P = 0.00082
Identities = 35/126 (27%), Positives = 56/126 (44%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
I+++ ++TD + LV+A D + V+D IP S V T +A +G+ + G
Sbjct: 58 IYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAP-SGNFVACGG 116
Query: 204 DDSLCKVWD---RRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
D++C ++ R + R G+L F+D D S+G D T LWDI
Sbjct: 117 LDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLD---DNNIVTSSG-DTTCALWDIE 172
Query: 261 KMSSNT 266
T
Sbjct: 173 TGQQKT 178
>TAIR|locus:2173542 [details] [associations]
symbol:AT5G60940 "AT5G60940" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 HSSP:P16649 HOGENOM:HOG000234077
KO:K14406 EMBL:AY084766 EMBL:AF515696 EMBL:AY136384 EMBL:BT000184
IPI:IPI00526744 RefSeq:NP_200902.1 UniGene:At.29134
ProteinModelPortal:Q8L4J2 SMR:Q8L4J2 IntAct:Q8L4J2 STRING:Q8L4J2
PaxDb:Q8L4J2 PRIDE:Q8L4J2 EnsemblPlants:AT5G60940.1 GeneID:836215
KEGG:ath:AT5G60940 TAIR:At5g60940 InParanoid:Q8L4J2 OMA:PWANCIV
PhylomeDB:Q8L4J2 ProtClustDB:CLSN2686712 ArrayExpress:Q8L4J2
Genevestigator:Q8L4J2 Uniprot:Q8L4J2
Length = 429
Score = 156 (60.0 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 67/253 (26%), Positives = 115/253 (45%)
Query: 25 SRYLPVNGPWKVDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDK-NWKIQKDIETKA 83
S+ +P + + S V ++FS DG FF +++IK++ V K I D + +
Sbjct: 108 SKTIPKHESKTLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQARP 167
Query: 84 LRWTITDTSLSPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFG 143
L T D + P + ++ SSA+++ K DFS + F
Sbjct: 168 LIRTFYDHA-EPINDLDFHPRSTILI------SSAKDNCI-----KFFDFSKTTAKRAFK 215
Query: 144 IF-------SVKFSTDGQELVAAGSDNFI-YVYDLQANKCSLRIPAHKSD------VNTV 189
+F S+ F G E + AG+D+ I ++YD+ +C L P++ D +N V
Sbjct: 216 VFQDTHNVRSISFHPSG-EFLLAGTDHPIPHLYDVNTYQCFL--PSNFPDSGVSGAINQV 272
Query: 190 CFADETGHLIFSGSDDSLCKVWD---RRCFISKGRANGVLMGHLEGITFIDSRRDGRYFI 246
++ TG + + S D +++D +C S G A+G + F +D R+ +
Sbjct: 273 RYSS-TGSIYITASKDGAIRLFDGVSAKCVRSIGNAHG--KSEVTSAVFT---KDQRFVL 326
Query: 247 SNGKDQTTKLWDI 259
S+GKD T KLW+I
Sbjct: 327 SSGKDSTVKLWEI 339
>UNIPROTKB|E7EP32 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 InterPro:IPR016346 PIRSF:PIRSF002394
HGNC:HGNC:4398 IPI:IPI00925530 SMR:E7EP32 Ensembl:ENST00000424361
Ensembl:ENST00000436220 Uniprot:E7EP32
Length = 296
Score = 152 (58.6 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 58/251 (23%), Positives = 104/251 (41%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRI----PAHKSDVNTVCFADETGHLI 199
+ + ++ G + G DN +Y L+ + ++R+ P H ++ F D+ + I
Sbjct: 56 VMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDD--NQI 113
Query: 200 FSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI 259
+ S D+ C +WD I G+ GH + + DGR F+S D + KLWD+
Sbjct: 114 ITSSGDTTCALWD----IETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDV 169
Query: 260 R-KMSSNT-----TDNSRLRDYDWDYRWMEYPSYA--RRLKHPHDQSLATYKGHSVLRTL 311
R M T +D + + + Y + A R DQ L Y +++ +
Sbjct: 170 RDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGI 229
Query: 312 IRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLIS 371
S +S + + + G D + I+D + G + L H+ V C M ++
Sbjct: 230 T----SVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRV-SCLGVTDDGMAVA 284
Query: 372 S-SWDCNIVRW 381
+ SWD + W
Sbjct: 285 TGSWDSFLKIW 295
Score = 116 (45.9 bits), Expect = 0.00037, P = 0.00037
Identities = 33/121 (27%), Positives = 56/121 (46%)
Query: 141 EFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKS---DVNTVCFADETGH 197
E I +V F +G D ++DL+A++ L + +H + + +V F+ +G
Sbjct: 182 ESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQ-ELLMYSHDNIICGITSVAFS-RSGR 239
Query: 198 LIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
L+ +G DD C +WD KG GVL GH ++ + DG + D K+W
Sbjct: 240 LLLAGYDDFNCNIWDAM----KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 295
Query: 258 D 258
+
Sbjct: 296 N 296
Score = 115 (45.5 bits), Expect = 0.00048, P = 0.00048
Identities = 34/119 (28%), Positives = 56/119 (47%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
I+++ + TD + LV+A D + ++D IP S V T +A +G+ + G
Sbjct: 14 IYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAP-SGNFVACGG 72
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGH---LEGITFIDSRRDGRYFISNGKDQTTKLWDI 259
D++C ++ + R + L GH L F+D D + S+G D T LWDI
Sbjct: 73 LDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLD---DNQIITSSG-DTTCALWDI 127
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 144 (55.7 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 42/122 (34%), Positives = 64/122 (52%)
Query: 146 SVKFSTDGQELVAAGSDN-FIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSD 204
SV+ +T +EL+ AGS + I V+DL+A K + HK+++ ++ F G + SGS
Sbjct: 72 SVRLNTP-EELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDF-HPYGEFVASGSQ 129
Query: 205 DSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR--KM 262
D+ K+WD R KG GH + + + DG++ S D T KLWD+ KM
Sbjct: 130 DTNIKLWDIR---RKGCVFRY-RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM 185
Query: 263 SS 264
S
Sbjct: 186 MS 187
Score = 125 (49.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 31/109 (28%), Positives = 48/109 (44%)
Query: 153 GQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWD 212
G+ L G D + ++ + C + + H S V +V + LI +GS +VWD
Sbjct: 37 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRL-NTPEELIVAGSQSGSIRVWD 95
Query: 213 RRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRK 261
+ + LMGH I +D G + S +D KLWDIR+
Sbjct: 96 ----LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRR 140
Score = 121 (47.7 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 43/195 (22%), Positives = 84/195 (43%)
Query: 179 IPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDS 238
I AH S+V+++ +G L+ +G DD +W I+K L GH + +
Sbjct: 20 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWS----INKPNCIMSLTGHTSPVESVRL 75
Query: 239 RRDGRYFISNGKDQTTKLWDIRKMSSNTT---DNSRLRDYDWD-Y-RWMEYPSYARRLKH 293
++ + + ++WD+ T + + D+ Y ++ S +K
Sbjct: 76 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 135
Query: 294 ---PHDQSLATYKGHSVLRTLIRCY-FSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAK 349
+ Y+GHS +RC FSP+ K++ + + D++V ++DL +G +++
Sbjct: 136 WDIRRKGCVFRYRGHS---QAVRCLRFSPD----GKWLASAADDHTVKLWDLTAGKMMSE 188
Query: 350 LDFHNAPVRDCCWHP 364
H PV +HP
Sbjct: 189 FPGHTGPVNVVEFHP 203
>ZFIN|ZDB-GENE-040426-2903 [details] [associations]
symbol:fbxw11b "F-box and WD-40 domain protein
11b" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-040426-2903 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:BX465186
EMBL:BC056809 IPI:IPI00494842 RefSeq:NP_998669.2 UniGene:Dr.75211
SMR:Q6PGW4 STRING:Q6PGW4 Ensembl:ENSDART00000019252 GeneID:406825
KEGG:dre:406825 CTD:406825 InParanoid:Q6PGW4 NextBio:20818332
Uniprot:Q6PGW4
Length = 527
Score = 157 (60.3 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 59/255 (23%), Positives = 118/255 (46%)
Query: 139 EDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFA-DETGH 197
E+ G++ +++ D +++++ DN I ++D Q +C + H V +C DE
Sbjct: 223 ENSKGVYCLQY--DDEKIISGLRDNSIKIWDKQTLECLKILTGHTGSV--LCLQYDE--R 276
Query: 198 LIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
+I +GS DS +VWD ++ G L+ H E + + R ++ KD++ +W
Sbjct: 277 VIVTGSSDSTVRVWD----VNSGEVLNTLIHHNEAVLHL--RFCNGLMVTCSKDRSIAVW 330
Query: 258 DIRKMSSNTT------DNSRLRDYDWDYRWMEYPSYARRLKHPHDQS---LATYKGHSVL 308
D+ + + + + D+D +++ S R +K + + T GH
Sbjct: 331 DMASPTDISLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGH--- 387
Query: 309 RTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPM 368
+ I C +Y + + +GSSDN++ ++D+ GA + L+ H VR C
Sbjct: 388 KRGIACL---QYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR--CIRFDNKR 440
Query: 369 LISSSWDCNIVRWEI 383
++S ++D I W++
Sbjct: 441 IVSGAYDGKIKVWDL 455
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 135 (52.6 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 55/232 (23%), Positives = 97/232 (41%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQ 97
G + V + +G V+A+++ IK++ V + ++ T W + P+Q
Sbjct: 190 GHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTF--TGHREWV---RMVRPNQ 244
Query: 98 RFLVYASICAIVNIVDVGSSA-RESLANVTIHKGL--------DFSADGDEDEFGIFSVK 148
+ AS C+ V V A +E A + H+ + + S + G + K
Sbjct: 245 DGTLIAS-CSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKK 303
Query: 149 FSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLC 208
G L++ D I ++D+ C + + H + V V F G I S +DD
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLF-HSGGKFILSCADDKTL 362
Query: 209 KVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
+VWD + +K R L H +T +D + Y ++ DQT K+W+ R
Sbjct: 363 RVWDYK---NK-RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 123 (48.4 bits), Expect = 3.2e-08, Sum P(3) = 3.2e-08
Identities = 33/144 (22%), Positives = 63/144 (43%)
Query: 116 SSARESLANVTIHKGLDF--SADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQAN 173
S++ ++ V ++ DF + G D + + F G+ L + +D I ++D Q
Sbjct: 125 SASEDATIKVWDYETGDFERTLKGHTDS--VQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 174 KCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGI 233
+C + H +V++V H++ S + D K+W+ + G GH E +
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIV-SAARDKTIKMWE----VQTGYCVKTFTGHREWV 237
Query: 234 TFIDSRRDGRYFISNGKDQTTKLW 257
+ +DG S DQT ++W
Sbjct: 238 RMVRPNQDGTLIASCSNDQTVRVW 261
Score = 115 (45.5 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 27/105 (25%), Positives = 50/105 (47%)
Query: 156 LVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRC 215
+V+A D I V+D + + H V + F D +G L+ S S D K+WD +
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWDFQG 181
Query: 216 FISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
F + GH ++ + +G + +S +D+T K+W+++
Sbjct: 182 F----ECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQ 222
Score = 73 (30.8 bits), Expect = 3.2e-08, Sum P(3) = 3.2e-08
Identities = 27/109 (24%), Positives = 53/109 (48%)
Query: 238 SRRDGRYFISNGKDQTTKLWDIRKMSSNTTDNSRLRDYDWDYRWMEYPSYARR-LKHPHD 296
S + G + +S +D+T K+WD+ S+ + + +W R + + S + L D
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDV---STGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADD 359
Query: 297 QSLAT--YKGHSVLRTL-IRCYF--SPEYSTAQKYIYTGSSDNSVYIYD 340
++L YK ++TL +F S ++ Y+ TGS D +V +++
Sbjct: 360 KTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 57 (25.1 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 13/63 (20%), Positives = 30/63 (47%)
Query: 320 YSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIV 379
+ + K+I + + D ++ ++D + + L+ H V +H P +++ S D +
Sbjct: 346 FHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Query: 380 RWE 382
WE
Sbjct: 406 VWE 408
Score = 55 (24.4 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 13/57 (22%), Positives = 30/57 (52%)
Query: 326 YIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWE 382
++ +GS D ++ ++D+ +G + L H+ VR +H ++S + D + W+
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 39 (18.8 bits), Expect = 3.2e-08, Sum P(3) = 3.2e-08
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 34 WKVDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVD 70
+ + G S V F S V+AS+++ IKV++ +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYE 138
Score = 38 (18.4 bits), Expect = 9.7e-05, Sum P(3) = 9.7e-05
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 367 PMLISSSWDCNIVRWEI 383
P L+S S D I W++
Sbjct: 309 PFLLSGSRDKTIKMWDV 325
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 144 (55.7 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 42/122 (34%), Positives = 64/122 (52%)
Query: 146 SVKFSTDGQELVAAGSDN-FIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSD 204
SV+ +T +EL+ AGS + I V+DL+A K + HK+++ ++ F G + SGS
Sbjct: 68 SVRLNTP-EELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDF-HPYGEFVASGSQ 125
Query: 205 DSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR--KM 262
D+ K+WD R KG GH + + + DG++ S D T KLWD+ KM
Sbjct: 126 DTNIKLWDIR---RKGCVFRY-RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM 181
Query: 263 SS 264
S
Sbjct: 182 MS 183
Score = 129 (50.5 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 47/206 (22%), Positives = 89/206 (43%)
Query: 179 IPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDS 238
I AH S+V+++ +G L+ +G DD +W I+K L GH + +
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWS----INKPNCIMSLTGHTSPVESVRL 71
Query: 239 RRDGRYFISNGKDQTTKLWDIRKMSSNTT---DNSRLRDYDWD-Y-RWMEYPSYARRLKH 293
++ + + ++WD+ T + + D+ Y ++ S +K
Sbjct: 72 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 294 ---PHDQSLATYKGHSVLRTLIRCY-FSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAK 349
+ Y+GHS +RC FSP+ K++ + + D++V ++DL +G +++
Sbjct: 132 WDIRRKGCVFRYRGHS---QAVRCLRFSPD----GKWLASAADDHTVKLWDLTAGKMMSE 184
Query: 350 LDFHNAPVRDCCWHPIYPMLISSSWD 375
H PV +HP +L S S D
Sbjct: 185 FPGHTGPVNVVEFHPNEYLLASGSSD 210
Score = 125 (49.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 31/109 (28%), Positives = 48/109 (44%)
Query: 153 GQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWD 212
G+ L G D + ++ + C + + H S V +V + LI +GS +VWD
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRL-NTPEELIVAGSQSGSIRVWD 91
Query: 213 RRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRK 261
+ + LMGH I +D G + S +D KLWDIR+
Sbjct: 92 ----LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRR 136
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 140 (54.3 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 57/232 (24%), Positives = 97/232 (41%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQ 97
G + V + +G V+AS++ IK++ V + ++ T W + P+Q
Sbjct: 190 GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF--TGHREWV---RMVRPNQ 244
Query: 98 RFLVYASICAIVNIVDVGSSA-RESLANVTIHKGL-DFSADGDEDEFGIFSV-------K 148
+ AS C+ V V A +E A + H+ + + + E + S K
Sbjct: 245 DGTLIAS-CSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSETKK 303
Query: 149 FSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLC 208
G L++ D I ++D+ C + + H + V V F G I S +DD
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLF-HSGGKFILSCADDKTL 362
Query: 209 KVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
+VWD F +K R L H +T +D + Y ++ DQT K+W+ R
Sbjct: 363 RVWD---FKNK-RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 125 (49.1 bits), Expect = 3.8e-08, Sum P(3) = 3.8e-08
Identities = 34/144 (23%), Positives = 63/144 (43%)
Query: 116 SSARESLANVTIHKGLDF--SADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQAN 173
S++ ++ V ++ DF + G D + + F G+ L + +D I ++D Q
Sbjct: 125 SASEDATIKVWDYETGDFERTLKGHTDS--VQDISFDHTGKLLASCSADMTIKLWDFQGF 182
Query: 174 KCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGI 233
+C + H +V++V H++ S S D K+W+ + G GH E +
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWE----VQTGYCVKTFTGHREWV 237
Query: 234 TFIDSRRDGRYFISNGKDQTTKLW 257
+ +DG S DQT ++W
Sbjct: 238 RMVRPNQDGTLIASCSNDQTVRVW 261
Score = 119 (46.9 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 28/105 (26%), Positives = 50/105 (47%)
Query: 156 LVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRC 215
+V+A D I V+D + + H V + F D TG L+ S S D K+WD +
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF-DHTGKLLASCSADMTIKLWDFQG 181
Query: 216 FISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
F + GH ++ + +G + +S +D+T K+W+++
Sbjct: 182 F----ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Score = 70 (29.7 bits), Expect = 3.8e-08, Sum P(3) = 3.8e-08
Identities = 27/109 (24%), Positives = 53/109 (48%)
Query: 238 SRRDGRYFISNGKDQTTKLWDIRKMSSNTTDNSRLRDYDWDYRWMEYPSYARR-LKHPHD 296
S + G + +S +D+T K+WDI S+ + + +W R + + S + L D
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDI---STGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADD 359
Query: 297 QSLAT--YKGHSVLRTL-IRCYF--SPEYSTAQKYIYTGSSDNSVYIYD 340
++L +K ++TL +F S ++ Y+ TGS D +V +++
Sbjct: 360 KTLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 58 (25.5 bits), Expect = 5.9e-07, Sum P(3) = 5.9e-07
Identities = 13/63 (20%), Positives = 30/63 (47%)
Query: 320 YSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIV 379
+ + K+I + + D ++ ++D + + L+ H V +H P +++ S D +
Sbjct: 346 FHSGGKFILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Query: 380 RWE 382
WE
Sbjct: 406 VWE 408
Score = 56 (24.8 bits), Expect = 9.4e-07, Sum P(3) = 9.4e-07
Identities = 13/57 (22%), Positives = 30/57 (52%)
Query: 326 YIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWE 382
++ +GS D ++ ++D+ +G + L H+ VR +H ++S + D + W+
Sbjct: 310 FLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 39 (18.8 bits), Expect = 3.8e-08, Sum P(3) = 3.8e-08
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 34 WKVDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVD 70
+ + G S V F S V+AS+++ IKV++ +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYE 138
Score = 39 (18.8 bits), Expect = 4.6e-05, Sum P(3) = 4.6e-05
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 367 PMLISSSWDCNIVRWEI 383
P L+S S D I W+I
Sbjct: 309 PFLLSGSRDKTIKMWDI 325
>FB|FBgn0035724 [details] [associations]
symbol:CG10064 species:7227 "Drosophila melanogaster"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 EMBL:AY089248 ProteinModelPortal:Q8T4D0
SMR:Q8T4D0 STRING:Q8T4D0 PaxDb:Q8T4D0 PRIDE:Q8T4D0
FlyBase:FBgn0035724 InParanoid:Q8T4D0 OrthoDB:EOG4547DW
ArrayExpress:Q8T4D0 Bgee:Q8T4D0 Uniprot:Q8T4D0
Length = 742
Score = 158 (60.7 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 63/253 (24%), Positives = 104/253 (41%)
Query: 142 FGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIP-AHKSDVNTVCFADETGHLIF 200
F V+F+ DG +V+ +D I + + IP AH + + A +G LI
Sbjct: 410 FNCACVRFTHDGTSIVSVWNDGIIRAFTPITGRLIYAIPNAHNKGCSALAVAS-SGRLIV 468
Query: 201 SGSDDSLCKVWDRRCFISKGRAN--GVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWD 258
+G + +VW I R + GVL H IT +D IS D + +WD
Sbjct: 469 TGGIEGQVRVWK----IDPYRQDLVGVLKDHSGPITSLDINYLDTEVISACTDGSCVIWD 524
Query: 259 IRKMSSNTTDNSRLRDYDWDYRWMEYPSYARRLKHPHDQSLA---TYKGHSVLRTLIRCY 315
I++M+ + + Y +P+ + + D + Y G +++R L
Sbjct: 525 IKRMTRKQVVTANTQFMSASY----FPTGVQVITCGSDGRIIYWMVYNG-ALIRELTASK 579
Query: 316 FSPEYSTAQK----YIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLIS 371
S A Y T SD V ++D SGA V H + V C + P M ++
Sbjct: 580 KSSVNCLAINETGDYFITVGSDLQVKLWDYNSGAVVGIGSEHASSVISCAYSPCMTMFVT 639
Query: 372 SSWDCNIVRWEIP 384
S D +++ W++P
Sbjct: 640 GSTDGSLIIWDVP 652
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 154 (59.3 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 49/177 (27%), Positives = 77/177 (43%)
Query: 81 TKALRWTITDTSLSPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDED 140
T+ + W + SPD R +V AS V + D ++RE + + H G
Sbjct: 142 TQHINW-VRCAKFSPDGRLIVSASDDKTVKLWD--KTSRECIHSYCEHGGF--------- 189
Query: 141 EFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIF 200
+ V F G + AAG DN + V+D + ++ H + VN + F +G+ +
Sbjct: 190 ---VTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSF-HPSGNYLI 245
Query: 201 SGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
+ S DS K+ D + +GR L GH T + R G YF S G D+ +W
Sbjct: 246 TASSDSTLKILD----LMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 140 (54.3 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 56/240 (23%), Positives = 101/240 (42%)
Query: 147 VKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDS 206
V FS + + L + D+ + ++ ++ + R HK V V F+ +GHL+ SGS D
Sbjct: 25 VDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSP-SGHLLASGSRDK 83
Query: 207 LCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRK---MS 263
++W KG + V H + + DG+ ++ D+T K+W + +
Sbjct: 84 TVRIWVPNV---KGEST-VFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLF 139
Query: 264 SNTTDNSRLR--DYDWDYRWMEYPSYARRLK---HPHDQSLATYKGHSVLRTLIRCYFSP 318
S T + +R + D R + S + +K + + +Y H T + F P
Sbjct: 140 SLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVD--FHP 197
Query: 319 EYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNI 378
T I DN+V ++D + + H+A V +HP LI++S D +
Sbjct: 198 S-GTC---IAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTL 253
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 61/254 (24%), Positives = 103/254 (40%)
Query: 137 GDEDEFGIFSVKFSTDGQELVAAGS-DNFIYVYDLQANKCSLRIPAHKSDVNTVCFADET 195
G +D + V FS G L+A+GS D + ++ S AH + V +V F +
Sbjct: 59 GHKD--AVTCVNFSPSGH-LLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSD- 114
Query: 196 GHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTK 255
G + + SDD KVW + R L H+ + DGR +S D+T K
Sbjct: 115 GQSLVTASDDKTVKVWSTH----RQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVK 170
Query: 256 LWD--IRKMSSNTTDNSRLRDYDWDYRWMEYPSYARRLKHPHDQSLATY--KGHSVLR-- 309
LWD R+ + ++ Y D+ +PS D ++ + + H +L+
Sbjct: 171 LWDKTSRECIHSYCEHGGFVTYV-DF----HPSGTCIAAAGMDNTVKVWDARTHRLLQHY 225
Query: 310 TLIRCYFSP-EYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPM 368
L + + + Y+ T SSD+++ I DL+ G + L H P +
Sbjct: 226 QLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEY 285
Query: 369 LISSSWDCNIVRWE 382
S D ++ W+
Sbjct: 286 FASGGSDEQVMVWK 299
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 140 (54.3 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 51/182 (28%), Positives = 88/182 (48%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYN-VDKNWK-IQKDIE--TKALRWTITDTSL 93
G N V + SNDG+ F +AS + + V++ K+ K + +D E + + W DT+
Sbjct: 231 GHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWA-PDTAY 289
Query: 94 SPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKG-LDFSADGDEDEFGIFSVKFSTD 152
+ + +I+ GS R S+ I+ G + F+ E+ + + F
Sbjct: 290 TNVTGQQPEGNS---THILFSGSRDR-SIKAWNINTGDVLFTLLAHEN--WVRGLAFHPK 343
Query: 153 GQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWD 212
G+ L++ D + V++L A +C I AH+ V+TV F +T + +GS D CKVW+
Sbjct: 344 GKYLISVADDKTLRVWELSAQRCMKAIEAHEHFVSTVAF-HQTSPFVITGSVDMSCKVWE 402
Query: 213 RR 214
R
Sbjct: 403 CR 404
Score = 135 (52.6 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 43/155 (27%), Positives = 65/155 (41%)
Query: 131 LDFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDL-QANKCSLRIPAHKSDVNTV 189
L+ + G D + + G++LV+ SD I ++D Q C + H+ V++V
Sbjct: 140 LERTLKGHTD--AVNDIAIDAAGKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSV 197
Query: 190 CFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNG 249
F TG + S S D K WD IS G GH + + I DG F S
Sbjct: 198 TFLP-TGDFVLSASRDHTIKQWD----ISTGYCVYTFRGHNDWVRMIRISNDGTLFASAS 252
Query: 250 KDQTTKLWDIRKMSSNTTDNSRLRDYDWDYRWMEY 284
DQT +W S+ LRD++ +E+
Sbjct: 253 LDQTVTVWSFATKSAKLV----LRDHEHAVECVEW 283
Score = 117 (46.2 bits), Expect = 0.00051, P = 0.00051
Identities = 61/249 (24%), Positives = 99/249 (39%)
Query: 156 LVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRC 215
+ + D I V+D + + + H VN + D G + S S D K+WD
Sbjct: 121 MASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAI-DAAGKQLVSCSSDLSIKLWD--- 176
Query: 216 FISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSSNTTDNSRLRDY 275
F L GH ++ + G + +S +D T K WDI S+ +
Sbjct: 177 FGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDI---STGYCVYTFRGHN 233
Query: 276 DWDYRWMEYPSYARRLKHPH-DQ-----SLATYKGHSVLRT---LIRCY-FSPE--YS-- 321
DW R + + DQ S AT VLR + C ++P+ Y+
Sbjct: 234 DW-VRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNV 292
Query: 322 TAQK-------YIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSW 374
T Q+ +++GS D S+ +++ +G + L H VR +HP LIS +
Sbjct: 293 TGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVAD 352
Query: 375 DCNIVRWEI 383
D + WE+
Sbjct: 353 DKTLRVWEL 361
Score = 102 (41.0 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 46/222 (20%), Positives = 88/222 (39%)
Query: 52 GSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQRFLVYASICAIVNI 111
G V+ S + +IK+++ + + K + K T++ + P F++ AS +
Sbjct: 160 GKQLVSCSSDLSIKLWDFGQTYDCLKSL--KGHEHTVSSVTFLPTGDFVLSASRDHTIKQ 217
Query: 112 VDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQ 171
D+ + ++ G D + ++ S DG +A D + V+
Sbjct: 218 WDISTGY------------CVYTFRGHND--WVRMIRISNDGTLFASASLDQTVTVWSFA 263
Query: 172 ANKCSLRIPAHKSDVNTVCFADETG--------------HLIFSGSDDSLCKVWDRRCFI 217
L + H+ V V +A +T H++FSGS D K W+ I
Sbjct: 264 TKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWN----I 319
Query: 218 SKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI 259
+ G L+ H + + G+Y IS D+T ++W++
Sbjct: 320 NTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWEL 361
Score = 61 (26.5 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 13/58 (22%), Positives = 29/58 (50%)
Query: 325 KYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWE 382
KY+ + + D ++ +++L + + ++ H V +H P +I+ S D + WE
Sbjct: 345 KYLISVADDKTLRVWELSAQRCMKAIEAHEHFVSTVAFHQTSPFVITGSVDMSCKVWE 402
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 152 (58.6 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 58/243 (23%), Positives = 103/243 (42%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
I SV FS + ++L + D+ + V+ ++ + R HK V V F+ +GHL+ SGS
Sbjct: 22 ITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSP-SGHLLASGS 80
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMS 263
D ++W KG + V H + + DG+ ++ D+T K+W +
Sbjct: 81 RDKTVRIWIPNV---KGEST-VFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQK 136
Query: 264 -----SNTTDNSRLRDYDWDYRWMEYPSYARRLK---HPHDQSLATYKGHSVLRTLIRCY 315
S + R + D R + S + +K + + +Y H T +
Sbjct: 137 FLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD-- 194
Query: 316 FSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWD 375
F P T I S DN+V ++D+ + + H+A V +HP L+++S D
Sbjct: 195 FHPS-GTC---IAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSD 250
Query: 376 CNI 378
+
Sbjct: 251 STL 253
Score = 144 (55.7 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 47/174 (27%), Positives = 75/174 (43%)
Query: 84 LRWTITDTSLSPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFG 143
+ W + SPD R +V AS V + D ++RE + + H G
Sbjct: 145 INW-VRCARFSPDGRLIVSASDDKTVKLWD--KTSRECVHSYCEHGGF------------ 189
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
+ V F G + AA DN + V+D++ ++ H + VN + F +G+ + + S
Sbjct: 190 VTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSF-HPSGNYLLTAS 248
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
DS K+ D + +GR L GH T + R G YF S G D+ +W
Sbjct: 249 SDSTLKILD----LMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 51 (23.0 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 19/86 (22%), Positives = 36/86 (41%)
Query: 19 DSCHVLSRYLPVNGPWKVDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKD 78
DSC ++ P + ++ G V FS G + S++ ++++ N K +
Sbjct: 40 DSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWI--PNVKGEST 97
Query: 79 IETKALRWTITDTSLSPDQRFLVYAS 104
+ +A T+ D + LV AS
Sbjct: 98 V-FRAHTATVRSVHFCSDGQSLVTAS 122
>RGD|1359321 [details] [associations]
symbol:Gnb4 "guanine nucleotide binding protein (G protein),
beta polypeptide 4" species:10116 "Rattus norvegicus" [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0044297 "cell body"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 RGD:1359321 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
GO:GO:0044297 PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:59345
KO:K04538 EMBL:AY552804 EMBL:BC097370 EMBL:AF022085 IPI:IPI00422067
RefSeq:NP_001013932.1 UniGene:Rn.10844 ProteinModelPortal:O35353
SMR:O35353 IntAct:O35353 STRING:O35353 PhosphoSite:O35353
PRIDE:O35353 GeneID:294962 KEGG:rno:294962 UCSC:RGD:1359321
InParanoid:O35353 NextBio:638784 ArrayExpress:O35353
Genevestigator:O35353 Uniprot:O35353
Length = 340
Score = 152 (58.6 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 56/251 (22%), Positives = 106/251 (42%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRI----PAHKSDVNTVCFADETGHLI 199
+ + ++ G + G DN +Y+L+ + ++R+ P H ++ F D+ G +I
Sbjct: 100 VMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDD-GQII 158
Query: 200 FSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI 259
S S D+ C +WD I G+ GH + + D + F+S D ++KLWDI
Sbjct: 159 TS-SGDTTCALWD----IETGQQTTTFTGHSGDVMSLSLSPDLKTFVSGACDASSKLWDI 213
Query: 260 R------KMSSNTTDNSRLRDYDWDYRWMEYPSYA--RRLKHPHDQSLATYKGHSVLRTL 311
R + + +D + + + Y + A R DQ L Y +++ +
Sbjct: 214 RDGMCRQSFTGHISDINAVSFFPSGYAFATGSDDATCRLFDLRADQELLLYSHDNIICGI 273
Query: 312 IRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLIS 371
S +S + + + G D + ++D + G + L H+ V C M ++
Sbjct: 274 T----SVAFSKSGRLLLAGYDDFNCSVWDALKGGRAGVLAGHDNRV-SCLGVTDDGMAVA 328
Query: 372 S-SWDCNIVRW 381
+ SWD + W
Sbjct: 329 TGSWDSFLRIW 339
Score = 121 (47.7 bits), Expect = 0.00013, P = 0.00013
Identities = 36/127 (28%), Positives = 59/127 (46%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
I+++ + D + LV+A D + ++D IP S V T +A +G+ + G
Sbjct: 58 IYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAP-SGNYVACGG 116
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGH---LEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
D++C +++ + R + L GH L F+D DG+ S+G D T LWDI
Sbjct: 117 LDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLD---DGQIITSSG-DTTCALWDIE 172
Query: 261 KMSSNTT 267
TT
Sbjct: 173 TGQQTTT 179
Score = 117 (46.2 bits), Expect = 0.00038, P = 0.00038
Identities = 33/118 (27%), Positives = 57/118 (48%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKS---DVNTVCFADETGHLIF 200
I +V F G D ++DL+A++ L + +H + + +V F+ ++G L+
Sbjct: 229 INAVSFFPSGYAFATGSDDATCRLFDLRADQ-ELLLYSHDNIICGITSVAFS-KSGRLLL 286
Query: 201 SGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWD 258
+G DD C VWD + GRA GVL GH ++ + DG + D ++W+
Sbjct: 287 AGYDDFNCSVWDA---LKGGRA-GVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN 340
>UNIPROTKB|P11017 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9913 "Bos taurus"
[GO:0006184 "GTP catabolic process" evidence=IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC140489 EMBL:M16480 EMBL:M36431 EMBL:M16539
IPI:IPI00712819 PIR:A26617 RefSeq:NP_001091030.1 UniGene:Bt.2055
ProteinModelPortal:P11017 SMR:P11017 STRING:P11017 PRIDE:P11017
Ensembl:ENSBTAT00000008508 GeneID:281202 KEGG:bta:281202 CTD:2783
InParanoid:P11017 KO:K04537 OMA:WDIETSQ NextBio:20805258
Uniprot:P11017
Length = 340
Score = 152 (58.6 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 58/251 (23%), Positives = 104/251 (41%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRI----PAHKSDVNTVCFADETGHLI 199
+ + ++ G + G DN +Y L+ + ++R+ P H ++ F D+ + I
Sbjct: 100 VMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDD--NQI 157
Query: 200 FSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI 259
+ S D+ C +WD I G+ GH + + DGR F+S D + KLWD+
Sbjct: 158 ITSSGDTTCALWD----IETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDV 213
Query: 260 R-KMSSNT-----TDNSRLRDYDWDYRWMEYPSYA--RRLKHPHDQSLATYKGHSVLRTL 311
R M T +D + + + Y + A R DQ L Y +++ +
Sbjct: 214 RDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGI 273
Query: 312 IRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLIS 371
S +S + + + G D + I+D + G + L H+ V C M ++
Sbjct: 274 T----SVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRV-SCLGVTDDGMAVA 328
Query: 372 S-SWDCNIVRW 381
+ SWD + W
Sbjct: 329 TGSWDSFLKIW 339
Score = 116 (45.9 bits), Expect = 0.00049, P = 0.00049
Identities = 33/121 (27%), Positives = 56/121 (46%)
Query: 141 EFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKS---DVNTVCFADETGH 197
E I +V F +G D ++DL+A++ L + +H + + +V F+ +G
Sbjct: 226 ESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQ-ELLMYSHDNIICGITSVAFS-RSGR 283
Query: 198 LIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
L+ +G DD C +WD KG GVL GH ++ + DG + D K+W
Sbjct: 284 LLLAGYDDFNCNIWDAM----KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Query: 258 D 258
+
Sbjct: 340 N 340
Score = 115 (45.5 bits), Expect = 0.00063, P = 0.00063
Identities = 34/119 (28%), Positives = 56/119 (47%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
I+++ + TD + LV+A D + ++D IP S V T +A +G+ + G
Sbjct: 58 IYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAP-SGNFVACGG 116
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGH---LEGITFIDSRRDGRYFISNGKDQTTKLWDI 259
D++C ++ + R + L GH L F+D D + S+G D T LWDI
Sbjct: 117 LDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLD---DNQIITSSG-DTTCALWDI 171
>UNIPROTKB|E2RD95 [details] [associations]
symbol:GNB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537
EMBL:AAEX03004274 RefSeq:XP_536861.2 ProteinModelPortal:E2RD95
SMR:E2RD95 PRIDE:E2RD95 Ensembl:ENSCAFT00000038242 GeneID:479733
KEGG:cfa:479733 NextBio:20854866 Uniprot:E2RD95
Length = 340
Score = 152 (58.6 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 58/251 (23%), Positives = 104/251 (41%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRI----PAHKSDVNTVCFADETGHLI 199
+ + ++ G + G DN +Y L+ + ++R+ P H ++ F D+ + I
Sbjct: 100 VMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDD--NQI 157
Query: 200 FSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI 259
+ S D+ C +WD I G+ GH + + DGR F+S D + KLWD+
Sbjct: 158 ITSSGDTTCALWD----IETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDV 213
Query: 260 R-KMSSNT-----TDNSRLRDYDWDYRWMEYPSYA--RRLKHPHDQSLATYKGHSVLRTL 311
R M T +D + + + Y + A R DQ L Y +++ +
Sbjct: 214 RDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGI 273
Query: 312 IRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLIS 371
S +S + + + G D + I+D + G + L H+ V C M ++
Sbjct: 274 T----SVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRV-SCLGVTDDGMAVA 328
Query: 372 S-SWDCNIVRW 381
+ SWD + W
Sbjct: 329 TGSWDSFLKIW 339
Score = 116 (45.9 bits), Expect = 0.00049, P = 0.00049
Identities = 33/121 (27%), Positives = 56/121 (46%)
Query: 141 EFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKS---DVNTVCFADETGH 197
E I +V F +G D ++DL+A++ L + +H + + +V F+ +G
Sbjct: 226 ESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQ-ELLMYSHDNIICGITSVAFS-RSGR 283
Query: 198 LIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
L+ +G DD C +WD KG GVL GH ++ + DG + D K+W
Sbjct: 284 LLLAGYDDFNCNIWDAM----KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Query: 258 D 258
+
Sbjct: 340 N 340
Score = 115 (45.5 bits), Expect = 0.00063, P = 0.00063
Identities = 34/119 (28%), Positives = 56/119 (47%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
I+++ + TD + LV+A D + ++D IP S V T +A +G+ + G
Sbjct: 58 IYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAP-SGNFVACGG 116
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGH---LEGITFIDSRRDGRYFISNGKDQTTKLWDI 259
D++C ++ + R + L GH L F+D D + S+G D T LWDI
Sbjct: 117 LDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLD---DNQIITSSG-DTTCALWDI 171
>UNIPROTKB|P62879 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005246
"calcium channel regulator activity" evidence=IEA] [GO:0043234
"protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0051020 "GTPase binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=TAS] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0006112 "energy reserve metabolic process"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0048471
Reactome:REACT_111102 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0006112 GO:GO:0004871 GO:GO:0007204
EMBL:AF053356 GO:GO:0071377 GO:GO:0005246 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 HPA:HPA040736 CTD:2783
KO:K04537 OMA:WDIETSQ EMBL:M16514 EMBL:M36429 EMBL:M16538
EMBL:AF501883 EMBL:BC010073 EMBL:BC012348 EMBL:BC068003
IPI:IPI00003348 PIR:B26617 RefSeq:NP_005264.2 UniGene:Hs.185172
ProteinModelPortal:P62879 SMR:P62879 IntAct:P62879
MINT:MINT-1139073 STRING:P62879 PhosphoSite:P62879 DMDM:51317304
OGP:P62879 REPRODUCTION-2DPAGE:P62879 PaxDb:P62879 PRIDE:P62879
DNASU:2783 Ensembl:ENST00000303210 Ensembl:ENST00000393924
Ensembl:ENST00000393926 GeneID:2783 KEGG:hsa:2783 UCSC:uc003uwb.3
GeneCards:GC07P100271 HGNC:HGNC:4398 HPA:CAB010032 MIM:139390
neXtProt:NX_P62879 PharmGKB:PA28778 InParanoid:P62879
PhylomeDB:P62879 GenomeRNAi:2783 NextBio:10963 ArrayExpress:P62879
Bgee:P62879 CleanEx:HS_GNB2 Genevestigator:P62879
GermOnline:ENSG00000172354 Uniprot:P62879
Length = 340
Score = 152 (58.6 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 58/251 (23%), Positives = 104/251 (41%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRI----PAHKSDVNTVCFADETGHLI 199
+ + ++ G + G DN +Y L+ + ++R+ P H ++ F D+ + I
Sbjct: 100 VMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDD--NQI 157
Query: 200 FSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI 259
+ S D+ C +WD I G+ GH + + DGR F+S D + KLWD+
Sbjct: 158 ITSSGDTTCALWD----IETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDV 213
Query: 260 R-KMSSNT-----TDNSRLRDYDWDYRWMEYPSYA--RRLKHPHDQSLATYKGHSVLRTL 311
R M T +D + + + Y + A R DQ L Y +++ +
Sbjct: 214 RDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGI 273
Query: 312 IRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLIS 371
S +S + + + G D + I+D + G + L H+ V C M ++
Sbjct: 274 T----SVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRV-SCLGVTDDGMAVA 328
Query: 372 S-SWDCNIVRW 381
+ SWD + W
Sbjct: 329 TGSWDSFLKIW 339
Score = 116 (45.9 bits), Expect = 0.00049, P = 0.00049
Identities = 33/121 (27%), Positives = 56/121 (46%)
Query: 141 EFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKS---DVNTVCFADETGH 197
E I +V F +G D ++DL+A++ L + +H + + +V F+ +G
Sbjct: 226 ESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQ-ELLMYSHDNIICGITSVAFS-RSGR 283
Query: 198 LIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
L+ +G DD C +WD KG GVL GH ++ + DG + D K+W
Sbjct: 284 LLLAGYDDFNCNIWDAM----KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Query: 258 D 258
+
Sbjct: 340 N 340
Score = 115 (45.5 bits), Expect = 0.00063, P = 0.00063
Identities = 34/119 (28%), Positives = 56/119 (47%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
I+++ + TD + LV+A D + ++D IP S V T +A +G+ + G
Sbjct: 58 IYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAP-SGNFVACGG 116
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGH---LEGITFIDSRRDGRYFISNGKDQTTKLWDI 259
D++C ++ + R + L GH L F+D D + S+G D T LWDI
Sbjct: 117 LDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLD---DNQIITSSG-DTTCALWDI 171
>MGI|MGI:95784 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein),
beta 2" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005246 "calcium channel regulator activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISA] [GO:0006184 "GTP catabolic
process" evidence=ISA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=TAS] [GO:0043234 "protein complex" evidence=ISO]
[GO:0044297 "cell body" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISO] [GO:0051020 "GTPase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:95784 GO:GO:0048471
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 EMBL:AF312033
GO:GO:0007204 GO:GO:0005246 PRINTS:PR00319 GO:GO:0005834
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537 EMBL:U34960
EMBL:AB045007 EMBL:BC029077 EMBL:BC059942 EMBL:BC062178 EMBL:U38505
IPI:IPI00162780 RefSeq:NP_034442.1 UniGene:Mm.30141
ProteinModelPortal:P62880 SMR:P62880 IntAct:P62880 STRING:P62880
PhosphoSite:P62880 REPRODUCTION-2DPAGE:IPI00162780 PaxDb:P62880
PRIDE:P62880 Ensembl:ENSMUST00000031726 Ensembl:ENSMUST00000150063
GeneID:14693 KEGG:mmu:14693 InParanoid:P62880 ChiTaRS:GNB2
NextBio:286635 Bgee:P62880 Genevestigator:P62880
GermOnline:ENSMUSG00000029713 Uniprot:P62880
Length = 340
Score = 152 (58.6 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 58/251 (23%), Positives = 104/251 (41%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRI----PAHKSDVNTVCFADETGHLI 199
+ + ++ G + G DN +Y L+ + ++R+ P H ++ F D+ + I
Sbjct: 100 VMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDD--NQI 157
Query: 200 FSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI 259
+ S D+ C +WD I G+ GH + + DGR F+S D + KLWD+
Sbjct: 158 ITSSGDTTCALWD----IETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDV 213
Query: 260 R-KMSSNT-----TDNSRLRDYDWDYRWMEYPSYA--RRLKHPHDQSLATYKGHSVLRTL 311
R M T +D + + + Y + A R DQ L Y +++ +
Sbjct: 214 RDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGI 273
Query: 312 IRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLIS 371
S +S + + + G D + I+D + G + L H+ V C M ++
Sbjct: 274 T----SVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRV-SCLGVTDDGMAVA 328
Query: 372 S-SWDCNIVRW 381
+ SWD + W
Sbjct: 329 TGSWDSFLKIW 339
Score = 116 (45.9 bits), Expect = 0.00049, P = 0.00049
Identities = 33/121 (27%), Positives = 56/121 (46%)
Query: 141 EFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKS---DVNTVCFADETGH 197
E I +V F +G D ++DL+A++ L + +H + + +V F+ +G
Sbjct: 226 ESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQ-ELLMYSHDNIICGITSVAFS-RSGR 283
Query: 198 LIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
L+ +G DD C +WD KG GVL GH ++ + DG + D K+W
Sbjct: 284 LLLAGYDDFNCNIWDAM----KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Query: 258 D 258
+
Sbjct: 340 N 340
Score = 115 (45.5 bits), Expect = 0.00063, P = 0.00063
Identities = 34/119 (28%), Positives = 56/119 (47%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
I+++ + TD + LV+A D + ++D IP S V T +A +G+ + G
Sbjct: 58 IYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAP-SGNFVACGG 116
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGH---LEGITFIDSRRDGRYFISNGKDQTTKLWDI 259
D++C ++ + R + L GH L F+D D + S+G D T LWDI
Sbjct: 117 LDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLD---DNQIITSSG-DTTCALWDI 171
>RGD|69319 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein), beta
polypeptide 2" species:10116 "Rattus norvegicus" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005246 "calcium channel
regulator activity" evidence=IMP] [GO:0043234 "protein complex"
evidence=IDA] [GO:0044297 "cell body" evidence=IDA] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO;ISS] [GO:0051020
"GTPase binding" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:69319
GO:GO:0048471 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0044297 GO:GO:0005246
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2783 KO:K04537 OMA:WDIETSQ EMBL:U34959
EMBL:AF277892 EMBL:BC065579 IPI:IPI00212658 RefSeq:NP_112299.1
UniGene:Rn.1155 ProteinModelPortal:P54313 SMR:P54313 STRING:P54313
PhosphoSite:P54313 World-2DPAGE:0004:P54313 PRIDE:P54313
Ensembl:ENSRNOT00000001911 GeneID:81667 KEGG:rno:81667
UCSC:RGD:69319 InParanoid:P54313 NextBio:615252 ArrayExpress:P54313
Genevestigator:P54313 GermOnline:ENSRNOG00000001409 Uniprot:P54313
Length = 340
Score = 152 (58.6 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 58/251 (23%), Positives = 104/251 (41%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRI----PAHKSDVNTVCFADETGHLI 199
+ + ++ G + G DN +Y L+ + ++R+ P H ++ F D+ + I
Sbjct: 100 VMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDD--NQI 157
Query: 200 FSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI 259
+ S D+ C +WD I G+ GH + + DGR F+S D + KLWD+
Sbjct: 158 ITSSGDTTCALWD----IETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDV 213
Query: 260 R-KMSSNT-----TDNSRLRDYDWDYRWMEYPSYA--RRLKHPHDQSLATYKGHSVLRTL 311
R M T +D + + + Y + A R DQ L Y +++ +
Sbjct: 214 RDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGI 273
Query: 312 IRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLIS 371
S +S + + + G D + I+D + G + L H+ V C M ++
Sbjct: 274 T----SVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRV-SCLGVTDDGMAVA 328
Query: 372 S-SWDCNIVRW 381
+ SWD + W
Sbjct: 329 TGSWDSFLKIW 339
Score = 116 (45.9 bits), Expect = 0.00049, P = 0.00049
Identities = 33/121 (27%), Positives = 56/121 (46%)
Query: 141 EFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKS---DVNTVCFADETGH 197
E I +V F +G D ++DL+A++ L + +H + + +V F+ +G
Sbjct: 226 ESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQ-ELLMYSHDNIICGITSVAFS-RSGR 283
Query: 198 LIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
L+ +G DD C +WD KG GVL GH ++ + DG + D K+W
Sbjct: 284 LLLAGYDDFNCNIWDAM----KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Query: 258 D 258
+
Sbjct: 340 N 340
Score = 115 (45.5 bits), Expect = 0.00063, P = 0.00063
Identities = 34/119 (28%), Positives = 56/119 (47%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
I+++ + TD + LV+A D + ++D IP S V T +A +G+ + G
Sbjct: 58 IYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAP-SGNFVACGG 116
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGH---LEGITFIDSRRDGRYFISNGKDQTTKLWDI 259
D++C ++ + R + L GH L F+D D + S+G D T LWDI
Sbjct: 117 LDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLD---DNQIITSSG-DTTCALWDI 171
>RGD|1311570 [details] [associations]
symbol:Ercc8 "excision repair cross-complementing rodent repair
deficiency, complementation group 8" species:10116 "Rattus
norvegicus" [GO:0000109 "nucleotide-excision repair complex"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0009411 "response
to UV" evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
[GO:0016363 "nuclear matrix" evidence=IEA] [GO:0031464 "Cul4A-RING
ubiquitin ligase complex" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045739 "positive regulation of DNA repair" evidence=IEA]
[GO:0051865 "protein autoubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311570 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 KO:K10570
EMBL:CH473955 CTD:1161 GeneTree:ENSGT00390000009065 OMA:TMLRGHY
RefSeq:NP_001101120.2 UniGene:Rn.107979 ProteinModelPortal:G3V7B8
Ensembl:ENSRNOT00000013598 GeneID:310071 KEGG:rno:310071
Uniprot:G3V7B8
Length = 397
Score = 101 (40.6 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 316 FSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCC-WHPIYPMLISSSW 374
F+ + ++++ D+++ +Y + SG ++A L H V DCC + P + L S S
Sbjct: 297 FTVSHGCNSEFVFV-PYDSTIAMYAVYSGERLAMLKGHYKSV-DCCVFQPNFQELYSGSR 354
Query: 375 DCNIVRWEIPGIGEAPLP 392
DCNI+ W +P E P+P
Sbjct: 355 DCNILAW-VPASYE-PVP 370
Score = 97 (39.2 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 34/130 (26%), Positives = 60/130 (46%)
Query: 156 LVAAGSDN-FIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWD-R 213
LVA G+ + + DL++ CS + H+ ++ V ++ +++ + S DS K+WD R
Sbjct: 158 LVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVR 217
Query: 214 R---CFIS----KGR-------ANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI 259
R C ++ G+ AN G + G+ F DG + ++ G D +LW+
Sbjct: 218 RASGCLLTLDQHNGKKSQAVESANTAHNGKVNGLCFTS---DGLHLLTVGTDNRMRLWN- 273
Query: 260 RKMSSNTTDN 269
NT N
Sbjct: 274 SSSGDNTLVN 283
Score = 72 (30.4 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 27/75 (36%), Positives = 40/75 (53%)
Query: 152 DGQELVAAGSDNFIYVYDLQ-ANK---------CSL-RI-P-AHKSDVNTV-CFADETGH 197
+G+ +++ GSD I +YDL+ A++ CS+ R P HK V TV + +TG
Sbjct: 55 EGRYMLSGGSDGVIVLYDLENASRQPYYTCKAVCSVGRSHPDVHKYSVETVQWYPHDTG- 113
Query: 198 LIFSGSDDSLCKVWD 212
+ S S D KVWD
Sbjct: 114 MFTSSSFDKTLKVWD 128
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 158 (60.7 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 38/114 (33%), Positives = 59/114 (51%)
Query: 146 SVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDD 205
SV F+++ ++A S I ++DL+ +K H+S+ + V F G + SGS D
Sbjct: 63 SVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEF-HPFGEFLASGSSD 121
Query: 206 SLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI 259
+ +VWD R KG GH GI+ I+ DGR+ +S G D K+WD+
Sbjct: 122 TNLRVWDTR---KKGCIQ-TYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDL 171
Score = 156 (60.0 bits), Expect = 9.6e-08, P = 9.6e-08
Identities = 48/212 (22%), Positives = 93/212 (43%)
Query: 181 AHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRR 240
AH +VN + +T L+ +G DD +W I K + L GH + +
Sbjct: 13 AHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWS----IGKTTSPMSLCGHTSPVDSVAFNS 68
Query: 241 DGRYFISNGKDQTTKLWD------IRKMSSNTTDNSRLRDYDWDYRWMEYPSYARRLKHP 294
+ ++ KLWD +R + + ++ S + + + ++ S L+
Sbjct: 69 EEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFG-EFLASGSSDTNLRVW 127
Query: 295 HDQS---LATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLD 351
+ + TYKGH+ R + FSP+ +++ +G DN V ++DL +G + +
Sbjct: 128 DTRKKGCIQTYKGHT--RGISTIEFSPD----GRWVVSGGLDNVVKVWDLTAGKLLHEFK 181
Query: 352 FHNAPVRDCCWHPIYPMLISSSWDCNIVRWEI 383
H P+R +HP+ +L + S D + W++
Sbjct: 182 CHEGPIRSLDFHPLEFLLATGSADRTVKFWDL 213
>ZFIN|ZDB-GENE-040718-126 [details] [associations]
symbol:wdr83 "WD repeat domain containing 83"
species:7955 "Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040718-126 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091642
EMBL:BC076138 IPI:IPI00510406 RefSeq:NP_001002429.1
UniGene:Dr.80944 ProteinModelPortal:Q6DH44 STRING:Q6DH44
PRIDE:Q6DH44 GeneID:436702 KEGG:dre:436702 CTD:84292
HOVERGEN:HBG105288 InParanoid:Q6DH44 KO:K13124 OrthoDB:EOG4ZCT4V
NextBio:20831145 ArrayExpress:Q6DH44 Uniprot:Q6DH44
Length = 315
Score = 137 (53.3 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 54/230 (23%), Positives = 94/230 (40%)
Query: 150 STDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCK 209
S D +L + SD + ++D+ + + + ++ H VN V F +E ++ SGS D +
Sbjct: 76 SYDNSQLCSCSSDKTVILWDVASGQVTRKLRGHAGKVNCVQFNEEAT-VMLSGSIDGTVR 134
Query: 210 VWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRK-------M 262
WD R + +L +GI+ + + ++ D + +D+R +
Sbjct: 135 CWDTRS--RRMEPIQILDESQDGISSL--KVSEHELLTGSVDGRVRRYDLRMGQLQVDYI 190
Query: 263 SSNTTDNSRLRDYDWDYRWMEYPSYARRLKHPHDQSLATYKGHSVLRTLIRCYFSPEYST 322
S T RD S R L + L Y GH + C + +
Sbjct: 191 GSPITCVCFSRDGQCTLS-SSLDSTVRLLDKSTGEMLGEYSGHVNKGYKLDCCLTDK--- 246
Query: 323 AQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISS 372
++ + S D VY +DLV G+ KL A V+ +HP P L++S
Sbjct: 247 -DTHVLSCSEDGHVYYWDLVEGSLTLKLPVGKAVVQSLSFHPTEPRLLTS 295
Score = 53 (23.7 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 9/39 (23%), Positives = 22/39 (56%)
Query: 34 WK-VDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDK 71
W+ VD V +F+ DG++ + + ++K+++V +
Sbjct: 18 WRTVDCQQGAVRAVRFNADGNYLLTCGSDKSLKLWSVSR 56
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 151 (58.2 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 63/258 (24%), Positives = 114/258 (44%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETG-HLIFSG 202
+ + ++TDG L +A +D + V+D + + R+ H S VN+ C+ G L+ +G
Sbjct: 113 VMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRGPQLVCTG 171
Query: 203 SDDSLCKVWDRRCFISKGRANGVLMGHLE--GITFIDSRRDGRYFISNGKDQTTKLWDIR 260
SDD K+WD I K A + +TF D+ IS G D K+WD+R
Sbjct: 172 SDDGTVKLWD----IRKKAAIQTFQNTYQVLAVTFNDTSDQ---IISGGIDNDIKVWDLR 224
Query: 261 K------MSSNTTDNSRLR-DYDWDYRWMEYPSYARRLKH-----PHDQSLATYKG--HS 306
+ M + + L + Y R+ P ++ + ++G H+
Sbjct: 225 QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHN 284
Query: 307 VLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIY 366
+ L+RC +SP+ S I GS+D+ +Y + +S + ++ H ++ P
Sbjct: 285 FEKNLLRCSWSPDGSK----IAAGSADSFLYPWHSLSVRSLGQIPRHRLSRQEDSVKPQE 340
Query: 367 PM-LISSSWDCNIVRWEI 383
+ ++S+S D + EI
Sbjct: 341 GIXILSASSDKRLYMGEI 358
Score = 126 (49.4 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 39/134 (29%), Positives = 57/134 (42%)
Query: 137 GDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCS--LRIPAHKSDVNTVCFADE 194
G E E ++ KF +G L +AG D I ++ + + C + H V + + +
Sbjct: 65 GHEGE--VYCCKFHPNGSTLASAGFDRLILLWSVYGD-CDNYATLKGHSGAVMELHYNTD 121
Query: 195 TGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQ-T 253
G ++FS S D VWD G L GH + R G + G D T
Sbjct: 122 -GSMLFSASTDKTVAVWDSET----GERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGT 176
Query: 254 TKLWDIRKMSSNTT 267
KLWDIRK ++ T
Sbjct: 177 VKLWDIRKKAAIQT 190
Score = 121 (47.7 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 24/92 (26%), Positives = 50/92 (54%)
Query: 139 EDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHL 198
++ + + +V F+ ++++ G DN I V+DL+ NK + + H V + + E +L
Sbjct: 192 QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYL 251
Query: 199 IFSGSDDSLCKVWDRRCFISKGRANGVLMGHL 230
+ + D+++ +VWD R F K R + G++
Sbjct: 252 LSNAMDNTV-RVWDVRPFAPKERCVKIFQGNV 282
Score = 46 (21.3 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 8/40 (20%), Positives = 21/40 (52%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQK 77
G + V ++ DGS +AS + + V++ + ++++
Sbjct: 108 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR 147
>GENEDB_PFALCIPARUM|MAL8P1.43 [details] [associations]
symbol:MAL8P1.43 "u5 snrnp-specific protein,
putative" species:5833 "Plasmodium falciparum" [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000091644 KO:K12857 EMBL:AL844507 RefSeq:XP_002808871.1
ProteinModelPortal:C0H4X1 EnsemblProtists:MAL8P1.43:mRNA
GeneID:2655384 KEGG:pfa:MAL8P1.43 EuPathDB:PlasmoDB:PF3D7_0822800
ProtClustDB:CLSZ2514512 Uniprot:C0H4X1
Length = 324
Score = 130 (50.8 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 59/253 (23%), Positives = 105/253 (41%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIF-SG 202
+ K+ D + +A +D+ ++++D++ C ++ + K N V D H +F S
Sbjct: 83 VLQAKWLQDDNYICSASADHKLFLWDVE---CESKLRSFKGHDNIVNGLDIINHNLFVSC 139
Query: 203 SDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKM 262
SDD+ K WD R SK + ++ H + + S + G + ++ D T K +D +
Sbjct: 140 SDDNTLKFWDIR---SKWAVH--IIKHDFPLLSVCSDKKGEFLFTSCVDNTIKKYDCKNY 194
Query: 263 SSNTTDNSRLRDYDWDYRWMEYPSYARRLKHPHDQSLATY--KGHSVLRTLIRCYFSPEY 320
T +DY + + + D+S+ + + S L+ SP+Y
Sbjct: 195 KLKDTFIGH-KDYITGLDINKDETMLASISA--DESICFWDIQPFSCEEKLLFQLNSPKY 251
Query: 321 STAQKYIYT----------GSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLI 370
+ I GS DN +YIYD L H + + D +HP+ ++
Sbjct: 252 NIDYNLIKLSFNNDNLLACGSGDNYLYIYDYKQKILKYSLPGHTSTINDVAFHPVEDIVA 311
Query: 371 SSSWDCNIVRWEI 383
S S D I EI
Sbjct: 312 SCSSDHTIFLGEI 324
Score = 61 (26.5 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 36 VDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNV 69
++ VY+ FS+DG + ++S + I V+NV
Sbjct: 33 INSHKGEVYSINFSSDGKYIASSSFDMTIMVHNV 66
>DICTYBASE|DDB_G0282793 [details] [associations]
symbol:wdr61 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AAFI02000047
GenomeReviews:CM000152_GR eggNOG:COG2319 HSSP:P16649
RefSeq:XP_640180.1 ProteinModelPortal:Q54S59
EnsemblProtists:DDB0267163 GeneID:8623719 KEGG:ddi:DDB_G0282793
OMA:CIWDIKT ProtClustDB:CLSZ2430473 Uniprot:Q54S59
Length = 299
Score = 149 (57.5 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 54/228 (23%), Positives = 104/228 (45%)
Query: 78 DIETKALRWTITDTSLSPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADG 137
D+ T L TI L L + + N+V V S S+ +V + L ++
Sbjct: 84 DLSTNTLHKTIDSGPLG----CLKIGFLNSANNLVSVSESGNISIYSVETGEKLRSISNT 139
Query: 138 DEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGH 197
++ + ++ S + +++ AG D + YD+++ + I AH + ++CF+ ++
Sbjct: 140 NKQ---VLTMAISPNNEQIAVAGLDGTVLCYDVESGRRVSEIKAHGVPIRSLCFSSDS-K 195
Query: 198 LIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGK-DQTTKL 256
IF+G++DS ++ D S L+GH I + + +G S+G D+ +
Sbjct: 196 TIFTGAEDSQIRLHDPN---SSNPYIASLLGHSSFIFSLVASSNGDLLASSGSIDRKVCI 252
Query: 257 WDI--RKMSSNTTDNSRLRDYDWDYRWMEYPSYARRLKHPHDQSLATY 302
WDI RK+ S+ T ++ D WD + P + + D S+ +Y
Sbjct: 253 WDIKTRKLDSSFTAHA---DQTWDLAFS--PDSTKLVSVSDDCSIHSY 295
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 153 (58.9 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 43/149 (28%), Positives = 69/149 (46%)
Query: 111 IVDVGSSARESLANVTIHKGLDFSAD-GDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYD 169
I G L + + H+ ++ D G F V F++ G + ++G+DN I ++D
Sbjct: 159 IASCGDDRTVRLWDTSSHQCINIFTDYGGSATF----VDFNSSGTCIASSGADNTIKIWD 214
Query: 170 LQANKCSLRIPAHKSDVNTVCFA-DETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMG 228
++ NK H + VN CF+ +G+ + SGS DS K+ D + +GR L G
Sbjct: 215 IRTNKLIQHYKVHNAGVN--CFSFHPSGNYLISGSSDSTIKILD----LLEGRLIYTLHG 268
Query: 229 HLEGITFIDSRRDGRYFISNGKDQTTKLW 257
H + + RDG F S G D +W
Sbjct: 269 HKGPVLTVTFSRDGDLFASGGADSQVLMW 297
Score = 147 (56.8 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 57/250 (22%), Positives = 103/250 (41%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
I V F+ G + ++ D + ++ S AH + V +V F+ + G + + S
Sbjct: 63 ITGVNFAPSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRD-GQRLVTAS 121
Query: 204 DDSLCKVW--DRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRK 261
DD KVW +R+ F+ L H + DGR S G D+T +LWD
Sbjct: 122 DDKSVKVWGVERKKFLYS------LNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDT-- 173
Query: 262 MSSNTTDNSRLRDYDWDYRWMEYPSYARRLKHPH-DQSLATY--------KGHSVLRTLI 312
SS+ N DY ++++ S + D ++ + + + V +
Sbjct: 174 -SSHQCINI-FTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGV 231
Query: 313 RCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISS 372
C+ + + Y+ +GSSD+++ I DL+ G + L H PV + + S
Sbjct: 232 NCF---SFHPSGNYLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFASG 288
Query: 373 SWDCNIVRWE 382
D ++ W+
Sbjct: 289 GADSQVLMWK 298
>MGI|MGI:104581 [details] [associations]
symbol:Gnb4 "guanine nucleotide binding protein (G protein),
beta 4" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISA] [GO:0006184 "GTP catabolic process" evidence=ISA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0044297 "cell body" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 MGI:MGI:104581
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:59345
KO:K04538 OMA:GACDATS EMBL:S86124 EMBL:M87286 EMBL:M63658
EMBL:AF277893 EMBL:AF501886 EMBL:AK036816 EMBL:AK152227
EMBL:AK167416 EMBL:BC028753 IPI:IPI00310220 PIR:JS0669
RefSeq:NP_038559.2 UniGene:Mm.139192 ProteinModelPortal:P29387
SMR:P29387 DIP:DIP-604N IntAct:P29387 STRING:P29387
PhosphoSite:P29387 REPRODUCTION-2DPAGE:P29387 PaxDb:P29387
PRIDE:P29387 Ensembl:ENSMUST00000108234 Ensembl:ENSMUST00000155737
GeneID:14696 KEGG:mmu:14696 InParanoid:P29387 NextBio:286647
Bgee:P29387 Genevestigator:P29387 GermOnline:ENSMUSG00000027669
Uniprot:P29387
Length = 340
Score = 150 (57.9 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 56/251 (22%), Positives = 106/251 (42%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRI----PAHKSDVNTVCFADETGHLI 199
+ + ++ G + G DN +Y+L+ + ++R+ P H ++ F D+ G +I
Sbjct: 100 VMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDD-GQII 158
Query: 200 FSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI 259
S S D+ C +WD I G+ GH + + D + F+S D ++KLWDI
Sbjct: 159 TS-SGDTTCALWD----IETGQQTTTFTGHSGDVMSLSLSPDLKTFVSGACDASSKLWDI 213
Query: 260 R------KMSSNTTDNSRLRDYDWDYRWMEYPSYA--RRLKHPHDQSLATYKGHSVLRTL 311
R + + +D + + + Y + A R DQ L Y +++ +
Sbjct: 214 RDGMCRQSFTGHISDINAVSFFPSGYAFATGSDDATCRLFDLRADQELLLYSHDNIICGI 273
Query: 312 IRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLIS 371
S +S + + + G D + ++D + G + L H+ V C M ++
Sbjct: 274 T----SVAFSKSGRLLLAGYDDFNCSVWDALKGGRSGVLAGHDNRV-SCLGVTDDGMAVA 328
Query: 372 S-SWDCNIVRW 381
+ SWD + W
Sbjct: 329 TGSWDSFLRIW 339
Score = 121 (47.7 bits), Expect = 0.00013, P = 0.00013
Identities = 36/127 (28%), Positives = 59/127 (46%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
I+++ + D + LV+A D + ++D IP S V T +A +G+ + G
Sbjct: 58 IYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAP-SGNYVACGG 116
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGH---LEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
D++C +++ + R + L GH L F+D DG+ S+G D T LWDI
Sbjct: 117 LDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLD---DGQIITSSG-DTTCALWDIE 172
Query: 261 KMSSNTT 267
TT
Sbjct: 173 TGQQTTT 179
Score = 116 (45.9 bits), Expect = 0.00049, P = 0.00049
Identities = 32/118 (27%), Positives = 56/118 (47%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKS---DVNTVCFADETGHLIF 200
I +V F G D ++DL+A++ L + +H + + +V F+ ++G L+
Sbjct: 229 INAVSFFPSGYAFATGSDDATCRLFDLRADQ-ELLLYSHDNIICGITSVAFS-KSGRLLL 286
Query: 201 SGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWD 258
+G DD C VWD KG +GVL GH ++ + DG + D ++W+
Sbjct: 287 AGYDDFNCSVWDAL----KGGRSGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN 340
>UNIPROTKB|E1BB14 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:DAAA02014455 IPI:IPI00703992 RefSeq:NP_001179276.1
UniGene:Bt.16171 ProteinModelPortal:E1BB14
Ensembl:ENSBTAT00000021348 GeneID:513340 KEGG:bta:513340
NextBio:20870819 Uniprot:E1BB14
Length = 340
Score = 150 (57.9 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 58/251 (23%), Positives = 101/251 (40%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQAN----KCSLRIPAHKSDVNTVCFADETGHLI 199
+ + ++ G + G DN +Y L++ K S + AH ++ F D+ I
Sbjct: 100 VMTCAYAPSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNN--I 157
Query: 200 FSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI 259
+ S D+ C +WD I G+ V +GH + D R FIS D + KLWD+
Sbjct: 158 VTSSGDTTCALWD----IETGQQKTVFVGHTGDCMSLAVSPDFRLFISGACDASAKLWDV 213
Query: 260 RKMSSNTTDNSRLRDYDWDYRWMEYPSYA--------RRLKHPHDQSLATYKGHSVLRTL 311
R+ + T D + + + R DQ L TY S++ +
Sbjct: 214 REGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTTYAHESIICGI 273
Query: 312 IRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLIS 371
S +S + + ++ G D + ++D + +V L H+ V C M ++
Sbjct: 274 T----SVAFSLSGRLLFAGYDDFNCNVWDSMKCERVGILSGHDNRV-SCLGVTADGMAVA 328
Query: 372 S-SWDCNIVRW 381
+ SWD + W
Sbjct: 329 TGSWDSFLKIW 339
Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
Identities = 34/121 (28%), Positives = 58/121 (47%)
Query: 141 EFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKS---DVNTVCFADETGH 197
E I ++ F +G+ + D ++DL+A++ L AH+S + +V F+ +G
Sbjct: 226 ESDINAICFFPNGEAICTGSDDASCRLFDLRADQ-ELTTYAHESIICGITSVAFS-LSGR 283
Query: 198 LIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
L+F+G DD C VWD K G+L GH ++ + DG + D K+W
Sbjct: 284 LLFAGYDDFNCNVWDSM----KCERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKIW 339
Query: 258 D 258
+
Sbjct: 340 N 340
Score = 114 (45.2 bits), Expect = 0.00082, P = 0.00082
Identities = 35/126 (27%), Positives = 56/126 (44%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
I+++ ++TD + LV+A D + V+D IP S V T +A +G+ + G
Sbjct: 58 IYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAP-SGNFVACGG 116
Query: 204 DDSLCKVWD---RRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
D++C ++ R + R G+L F+D D S+G D T LWDI
Sbjct: 117 LDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLD---DNNIVTSSG-DTTCALWDIE 172
Query: 261 KMSSNT 266
T
Sbjct: 173 TGQQKT 178
>UNIPROTKB|F1SLU8 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:NMCSIYS EMBL:FP325257
Ensembl:ENSSSCT00000000743 Uniprot:F1SLU8
Length = 340
Score = 150 (57.9 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 57/251 (22%), Positives = 101/251 (40%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQAN----KCSLRIPAHKSDVNTVCFADETGHLI 199
+ + ++ G + G DN +Y L++ K S + AH ++ F D+ I
Sbjct: 100 VMTCAYAPSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNN--I 157
Query: 200 FSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI 259
+ S D+ C +WD I G+ V +GH + D + FIS D + KLWD+
Sbjct: 158 VTSSGDTTCALWD----IETGQQKTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDV 213
Query: 260 RKMSSNTTDNSRLRDYDWDYRWMEYPSYA--------RRLKHPHDQSLATYKGHSVLRTL 311
R+ + T D + + + R DQ L TY S++ +
Sbjct: 214 REGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTTYSHESIICGI 273
Query: 312 IRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLIS 371
S +S + + ++ G D + ++D + +V L H+ V C M ++
Sbjct: 274 T----SVAFSLSGRLLFAGYDDFNCNVWDSMKCERVGTLSGHDNRV-SCLGVTADGMAVA 328
Query: 372 S-SWDCNIVRW 381
+ SWD + W
Sbjct: 329 TGSWDSFLKIW 339
Score = 114 (45.2 bits), Expect = 0.00082, P = 0.00082
Identities = 33/121 (27%), Positives = 57/121 (47%)
Query: 141 EFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKS---DVNTVCFADETGH 197
E I ++ F +G+ + D ++DL+A++ L +H+S + +V F+ +G
Sbjct: 226 ESDINAICFFPNGEAICTGSDDASCRLFDLRADQ-ELTTYSHESIICGITSVAFS-LSGR 283
Query: 198 LIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
L+F+G DD C VWD K G L GH ++ + DG + D K+W
Sbjct: 284 LLFAGYDDFNCNVWDSM----KCERVGTLSGHDNRVSCLGVTADGMAVATGSWDSFLKIW 339
Query: 258 D 258
+
Sbjct: 340 N 340
Score = 114 (45.2 bits), Expect = 0.00082, P = 0.00082
Identities = 35/126 (27%), Positives = 56/126 (44%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
I+++ ++TD + LV+A D + V+D IP S V T +A +G+ + G
Sbjct: 58 IYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAP-SGNFVACGG 116
Query: 204 DDSLCKVWD---RRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
D++C ++ R + R G+L F+D D S+G D T LWDI
Sbjct: 117 LDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLD---DNNIVTSSG-DTTCALWDIE 172
Query: 261 KMSSNT 266
T
Sbjct: 173 TGQQKT 178
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 146 (56.5 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 43/118 (36%), Positives = 57/118 (48%)
Query: 146 SVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDD 205
SV FS+DGQ LV A D I V+ + K + H + V F+ + G LI S SDD
Sbjct: 109 SVHFSSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPD-GRLIASASDD 167
Query: 206 SLCKVWD---RRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
K+WD R C I +G H+E F S G + G D+T K+WD+R
Sbjct: 168 KTVKLWDKTSREC-IHSFCEHGGFANHVE---FHPS---GTCIAAAGTDKTVKVWDVR 218
Score = 142 (55.0 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 47/174 (27%), Positives = 79/174 (45%)
Query: 84 LRWTITDTSLSPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFG 143
+ W + SPD R + AS V + D ++RE + + H G A+
Sbjct: 146 INW-VRCARFSPDGRLIASASDDKTVKLWD--KTSRECIHSFCEHGGF---AN------- 192
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
V+F G + AAG+D + V+D++ N+ H + VN++ F +G+ + + S
Sbjct: 193 --HVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSF-HPSGNYLITAS 249
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
+DS K+ D + +GR L GH T + R G +F S G D+ +W
Sbjct: 250 NDSTLKILD----LLEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQVMVW 299
Score = 113 (44.8 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 37/123 (30%), Positives = 56/123 (45%)
Query: 137 GDEDEFGIFSVKFSTDGQELVAAGS-DNFIYVYDLQANKCSLRIPAHKSDVNTVCFADET 195
G +D + V+FS G LVA+GS D + ++ S AH + V +V F+ +
Sbjct: 60 GHKD--AVMCVQFSPSGH-LVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSD- 115
Query: 196 GHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTK 255
G + + SDD KVW + + + L H+ + DGR S D+T K
Sbjct: 116 GQSLVTASDDKTIKVWT----VHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVK 171
Query: 256 LWD 258
LWD
Sbjct: 172 LWD 174
Score = 54 (24.1 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 14/60 (23%), Positives = 26/60 (43%)
Query: 319 EYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNI 378
E+ + I +D +V ++D+ + H A V +HP LI++S D +
Sbjct: 195 EFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTL 254
Score = 42 (19.8 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 21/86 (24%), Positives = 35/86 (40%)
Query: 19 DSCHVLSRYLPVNGPWKVDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKD 78
DSC + P + + G V QFS G + S++ + ++ + K +
Sbjct: 41 DSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSPSGHLVASGSRDKTVCLWV--PSVKGEST 98
Query: 79 IETKALRWTITDTSLSPDQRFLVYAS 104
+ KA T+ S D + LV AS
Sbjct: 99 V-FKAHTATVRSVHFSSDGQSLVTAS 123
>UNIPROTKB|Q8IU52 [details] [associations]
symbol:TUWD12 "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 HOVERGEN:HBG057502
UniGene:Hs.604487 HGNC:HGNC:30836 HSSP:Q02793 EMBL:AB053266
EMBL:AB053276 IPI:IPI00796655 SMR:Q8IU52 STRING:Q8IU52
Ensembl:ENST00000393179 Uniprot:Q8IU52
Length = 348
Score = 150 (57.9 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 60/221 (27%), Positives = 90/221 (40%)
Query: 86 WTITDTSLSPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIF 145
W + SPD R +V S + I D + + N +FS D F F
Sbjct: 16 W-VRCAKFSPDGRLIVSCSEDKTIKIWD---TTNKQCVN-------NFS---DSVGFANF 61
Query: 146 SVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDD 205
V F+ G + +AGSD + V+D++ NK H VN + F +LI + SD
Sbjct: 62 -VDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDG 120
Query: 206 SLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW----DIRK 261
+L K+ D + +GR L GH + + + G F S G D LW D
Sbjct: 121 TL-KILD----LLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNFDELH 175
Query: 262 MSSNTTDNSRLRDYDWDYRWME-YPSYARRLKHPHDQSLAT 301
T N + +D ++ YP R HPH++ + T
Sbjct: 176 CKGLTKRNLKRLHFDSPPHLLDIYP----RTPHPHEEKVET 212
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 131 (51.2 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 41/181 (22%), Positives = 78/181 (43%)
Query: 116 SSARESLANVTIHKGLDF--SADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQAN 173
S++ ++ V ++ DF + G D + + F G+ L + +D I ++D Q
Sbjct: 125 SASEDATIKVWDYEAGDFERTLKGHTDS--VQDISFDQTGKLLASCSADMTIKLWDFQGF 182
Query: 174 KCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGI 233
+C + H +V++V H++ S S D K+W+ ++ G GH E +
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTMKMWE----VATGYCVKTFTGHREWV 237
Query: 234 TFIDSRRDGRYFISNGKDQTTKLWDIRKMSSNTTDNSRLRDYDWDYRWMEYPSYARRLKH 293
+ +DG S DQT ++W + + LR+++ +E S+A H
Sbjct: 238 RMVRPNQDGTLLASCSNDQTVRVWVVATKECK----AELREHE---HVVECISWAPESAH 290
Query: 294 P 294
P
Sbjct: 291 P 291
Score = 127 (49.8 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 52/232 (22%), Positives = 98/232 (42%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQ 97
G + V + +G V+AS++ +K++ V + ++ T W + P+Q
Sbjct: 190 GHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTF--TGHREWV---RMVRPNQ 244
Query: 98 RFLVYASICAIVNIVDVGSSA-RESLANVTIHKG----LDFSADGDE----DEFGIFSVK 148
+ AS C+ V V A +E A + H+ + ++ + + G + K
Sbjct: 245 DGTLLAS-CSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTISEATGSENKK 303
Query: 149 FSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLC 208
G L++ D I ++D+ C + + H + V V F G + S +DD
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLF-HPGGRFVVSCADDKTL 362
Query: 209 KVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
++WD + +K R L H +T +D + Y ++ DQT K+W+ R
Sbjct: 363 RIWDYK---NK-RCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWECR 410
Score = 124 (48.7 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 29/104 (27%), Positives = 51/104 (49%)
Query: 156 LVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRC 215
+V+A D I V+D +A + H V + F D+TG L+ S S D K+WD +
Sbjct: 123 MVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISF-DQTGKLLASCSADMTIKLWDFQG 181
Query: 216 FISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI 259
F + GH ++ + +G + +S +D+T K+W++
Sbjct: 182 F----ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEV 221
Score = 99 (39.9 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 26/82 (31%), Positives = 36/82 (43%)
Query: 179 IPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDS 238
+ H+S V V F L+ S S+D+ KVWD G L GH + + I
Sbjct: 104 LSGHRSPVTRVIF-HPVFSLMVSASEDATIKVWDYEA----GDFERTLKGHTDSVQDISF 158
Query: 239 RRDGRYFISNGKDQTTKLWDIR 260
+ G+ S D T KLWD +
Sbjct: 159 DQTGKLLASCSADMTIKLWDFQ 180
Score = 63 (27.2 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 14/57 (24%), Positives = 31/57 (54%)
Query: 326 YIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWE 382
++ +GS D ++ ++D+ +G + L H+ VR +HP ++S + D + W+
Sbjct: 310 FLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWD 366
Score = 52 (23.4 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 12/58 (20%), Positives = 27/58 (46%)
Query: 325 KYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWE 382
+++ + + D ++ I+D + + L H V +H P +++ S D + WE
Sbjct: 351 RFVVSCADDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWE 408
Score = 39 (18.8 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 367 PMLISSSWDCNIVRWEI 383
P L+S S D I W+I
Sbjct: 309 PFLLSGSRDKTIKMWDI 325
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 135 (52.6 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 58/231 (25%), Positives = 94/231 (40%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIE----TKALRWTITDT-- 91
G + V + F G + ++AS++ IK++ V + ++ + +R I +
Sbjct: 191 GHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIF 250
Query: 92 -SLSPDQRFLVYASICAIVNIVDVGSSARESLANVT-IHKGLDFSADGDEDEFGIFSVKF 149
+ S DQ V+ + N D R+ V I + +A + G + K
Sbjct: 251 ATCSNDQTIRVW-----LTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKG 305
Query: 150 STDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCK 209
G L + D I ++D+ C L + H + V + F G + S SDD +
Sbjct: 306 HHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAF-HPGGKYLVSASDDKTIR 364
Query: 210 VWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
VWD R +K R L H T ID + Y IS DQT K+W+ R
Sbjct: 365 VWDLR---NK-RCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWECR 411
Score = 118 (46.6 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 37/145 (25%), Positives = 64/145 (44%)
Query: 134 SADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQAN-KCSLRIPAHKSDVNTVCFA 192
S G D + V F G+ L + +D I ++D Q + +C + H +V++V F
Sbjct: 145 SLKGHTDS--VQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFV 202
Query: 193 DETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQ 252
G + S S D K+W+ ++ G GH E + + +G F + DQ
Sbjct: 203 P-AGDYVLSASRDRTIKMWE----VATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQ 257
Query: 253 TTKLWDIRKMSSNTTD-NSRLRDYD 276
T ++W +N+ D LRD++
Sbjct: 258 TIRVW-----LTNSKDCKVELRDHE 277
Score = 112 (44.5 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 28/104 (26%), Positives = 47/104 (45%)
Query: 156 LVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRC 215
+V+A D I ++D + + + H V V F D G L+ S S D K+WD
Sbjct: 123 MVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAF-DAQGKLLASCSADLSIKLWD--- 178
Query: 216 FISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI 259
F + GH ++ + G Y +S +D+T K+W++
Sbjct: 179 FQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEV 222
Score = 82 (33.9 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 20/83 (24%), Positives = 36/83 (43%)
Query: 179 IPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDS 238
+ H++ + V F L+ S S+D+ ++WD G L GH + + +
Sbjct: 104 LTGHRASITRVIFHPIFA-LMVSASEDATIRIWD----FETGEYERSLKGHTDSVQDVAF 158
Query: 239 RRDGRYFISNGKDQTTKLWDIRK 261
G+ S D + KLWD ++
Sbjct: 159 DAQGKLLASCSADLSIKLWDFQQ 181
Score = 77 (32.2 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 326 YIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWEI 383
++ +GS D ++ I+D+ G + L H+ VR +HP L+S+S D I W++
Sbjct: 311 FLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDL 368
Score = 69 (29.3 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 16/58 (27%), Positives = 28/58 (48%)
Query: 325 KYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWE 382
KY+ + S D ++ ++DL + + L H +H +P +IS S D + WE
Sbjct: 352 KYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWE 409
>UNIPROTKB|F1SKV7 [details] [associations]
symbol:ERCC8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051865 "protein autoubiquitination" evidence=IEA]
[GO:0045739 "positive regulation of DNA repair" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032403 "protein complex binding"
evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin ligase complex"
evidence=IEA] [GO:0016363 "nuclear matrix" evidence=IEA]
[GO:0010165 "response to X-ray" evidence=IEA] [GO:0009411 "response
to UV" evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0000109
"nucleotide-excision repair complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009411 GO:GO:0006979 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004842 GO:GO:0016363
GO:GO:0000209 GO:GO:0010165 GO:GO:0045739 GO:GO:0051865
GO:GO:0006283 KO:K10570 GO:GO:0031464 GO:GO:0000109
GeneTree:ENSGT00390000009065 OMA:TMLRGHY EMBL:CU570846
EMBL:FP067346 RefSeq:XP_003134037.3 Ensembl:ENSSSCT00000018442
GeneID:100524405 KEGG:ssc:100524405 Uniprot:F1SKV7
Length = 396
Score = 99 (39.9 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 35/130 (26%), Positives = 60/130 (46%)
Query: 156 LVAAGSDN-FIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWD-R 213
LVA G+ + + DL++ CS + H+ ++ V ++ +++ + S DS K+WD R
Sbjct: 158 LVAVGTKGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYEYILATASADSKAKLWDVR 217
Query: 214 R---CFIS----KGR-------ANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI 259
R C I+ G+ AN G + G+ F DG + ++ G D +LW+
Sbjct: 218 RASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS---DGLHLLTVGTDNRMRLWNS 274
Query: 260 RKMSSNTTDN 269
NT N
Sbjct: 275 SN-GENTLVN 283
Score = 97 (39.2 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 30/96 (31%), Positives = 48/96 (50%)
Query: 296 DQSLATY-KGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHN 354
+ +L Y K H+ R ++ S ST ++ GS+ + +Y + SG Q+ L H
Sbjct: 278 ENTLVNYGKVHNDSRKGLKFTVSCGCSTEFVFVPYGST---IAVYTIYSGEQITMLKGHY 334
Query: 355 APVRDCC-WHPIYPMLISSSWDCNIVRWEIPGIGEA 389
V DCC + + L S S DCNI+ W +P + E+
Sbjct: 335 KSV-DCCVFQSNFQELYSGSRDCNILAW-VPSLYES 368
Score = 73 (30.8 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 26/75 (34%), Positives = 39/75 (52%)
Query: 152 DGQELVAAGSDNFIYVYDLQ-ANK---------CSL--RIP-AHKSDVNTV-CFADETGH 197
+G+ +++ GSD I +YDL+ A++ CS+ P HK V TV + +TG
Sbjct: 55 EGRYMLSGGSDGVIVLYDLENASRQPYYTCKAVCSVGRNHPDVHKYSVETVQWYPHDTG- 113
Query: 198 LIFSGSDDSLCKVWD 212
+ S S D KVWD
Sbjct: 114 MFTSSSFDKTLKVWD 128
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 152 (58.6 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 61/247 (24%), Positives = 109/247 (44%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
+ S++FS G L +A D + ++ L S AH + V +V F+ + G L+ + S
Sbjct: 63 VTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSAD-GQLLVTAS 121
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI--RK 261
+D KVW + + R L H + DGR +S +D+T K+WD ++
Sbjct: 122 EDKSIKVWS----MFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQ 177
Query: 262 MSSNTTDNSRLRDY-DWDYRWMEYPS----YARRLKHPH-DQSLATYKGHSVLRTLIRCY 315
+N +D+ ++ D++ S +A ++ ++ L Y+ HS + C
Sbjct: 178 CVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCG---VNCL 234
Query: 316 -FSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSW 374
F P ++ + T SSD +V + DL+ G + L H PV + +L S
Sbjct: 235 SFHPLGNS----LVTASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGA 290
Query: 375 DCNIVRW 381
D ++ W
Sbjct: 291 DAQVLIW 297
Score = 129 (50.5 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 55/242 (22%), Positives = 108/242 (44%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
I S FS + +++ A D F+ ++ L+ + + R HK V ++ F+ + G+L+ S S
Sbjct: 21 ITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQ-GNLLASAS 79
Query: 204 DDSLCKVW--DRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI-- 259
D ++W DR KG+++ H + +D DG+ ++ +D++ K+W +
Sbjct: 80 RDRTVRLWVLDR-----KGKSSE-FKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMFR 133
Query: 260 -RKMSS--NTTDNSRLRDYDWDYRWMEYPSYARRLK---HPHDQSLATYKGHSVLRTLIR 313
R + S T R + D R + S + +K + Q + + +
Sbjct: 134 QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVD 193
Query: 314 CYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSS 373
F+P T I + SD++V I+D+ + H+ V +HP+ L+++S
Sbjct: 194 --FNPN-GTC---IASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTAS 247
Query: 374 WD 375
D
Sbjct: 248 SD 249
Score = 126 (49.4 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 45/172 (26%), Positives = 72/172 (41%)
Query: 86 WTITDTSLSPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIF 145
W + SPD R +V S + I D + + N +FS D F F
Sbjct: 146 W-VRCAKFSPDGRLIVSCSEDKTIKIWD---TTNKQCVN-------NFS---DSVGFANF 191
Query: 146 SVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDD 205
V F+ +G + +AGSD+ + ++D++ NK H VN + F G+ + + S D
Sbjct: 192 -VDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSF-HPLGNSLVTASSD 249
Query: 206 SLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
K+ D + +GR L GH + + +DG S G D +W
Sbjct: 250 GTVKMLD----LIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIW 297
Score = 64 (27.6 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 43 VYTS-QFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQRFLV 101
V TS QFS G+ +AS++ ++++ +D+ K E KA + S D + LV
Sbjct: 62 VVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSS---EFKAHTAPVRSVDFSADGQLLV 118
Query: 102 YAS 104
AS
Sbjct: 119 TAS 121
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 154 (59.3 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 58/240 (24%), Positives = 98/240 (40%)
Query: 153 GQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWD 212
G+ L G D + ++ + C + + H S V +V + LI +GS +VWD
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRL-NTPEELIVAGSQSGSIRVWD 91
Query: 213 RRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSS-----NTT 267
+ + LMGH I +D G + S +D KLWDIR+ +
Sbjct: 92 ----LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHS 147
Query: 268 DNSRLRDYDWDYRWMEYPSYARRLKH---PHDQSLATYKGHSVLRTLIRCYFSP-EYSTA 323
R + D +W+ + +K + ++ + GH+ ++ F P EY A
Sbjct: 148 QAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVE--FHPNEYLLA 205
Query: 324 QKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDC-NIVRWE 382
+GSSD ++ +DL V+ ++ PVR ++P L S D + WE
Sbjct: 206 -----SGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWE 260
Score = 144 (55.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 42/122 (34%), Positives = 64/122 (52%)
Query: 146 SVKFSTDGQELVAAGSDN-FIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSD 204
SV+ +T +EL+ AGS + I V+DL+A K + HK+++ ++ F G + SGS
Sbjct: 68 SVRLNTP-EELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDF-HPYGEFVASGSQ 125
Query: 205 DSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR--KM 262
D+ K+WD R KG GH + + + DG++ S D T KLWD+ KM
Sbjct: 126 DTNIKLWDIR---RKGCVFRY-RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM 181
Query: 263 SS 264
S
Sbjct: 182 MS 183
Score = 139 (54.0 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 49/214 (22%), Positives = 93/214 (43%)
Query: 179 IPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDS 238
I AH S+V+++ +G L+ +G DD +W I+K L GH + +
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWS----INKPNCIMSLTGHTSPVESVRL 71
Query: 239 RRDGRYFISNGKDQTTKLWDIRKMSSNTT---DNSRLRDYDWD-Y-RWMEYPSYARRLKH 293
++ + + ++WD+ T + + D+ Y ++ S +K
Sbjct: 72 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 294 ---PHDQSLATYKGHSVLRTLIRCY-FSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAK 349
+ Y+GHS +RC FSP+ K++ + + D++V ++DL +G +++
Sbjct: 132 WDIRRKGCVFRYRGHS---QAVRCLRFSPD----GKWLASAADDHTVKLWDLTAGKMMSE 184
Query: 350 LDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWEI 383
H PV +HP +L S S D I W++
Sbjct: 185 FPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 154 (59.3 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 58/240 (24%), Positives = 98/240 (40%)
Query: 153 GQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWD 212
G+ L G D + ++ + C + + H S V +V + LI +GS +VWD
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRL-NTPEELIVAGSQSGSIRVWD 91
Query: 213 RRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSS-----NTT 267
+ + LMGH I +D G + S +D KLWDIR+ +
Sbjct: 92 ----LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHS 147
Query: 268 DNSRLRDYDWDYRWMEYPSYARRLKH---PHDQSLATYKGHSVLRTLIRCYFSP-EYSTA 323
R + D +W+ + +K + ++ + GH+ ++ F P EY A
Sbjct: 148 QAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVE--FHPNEYLLA 205
Query: 324 QKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDC-NIVRWE 382
+GSSD ++ +DL V+ ++ PVR ++P L S D + WE
Sbjct: 206 -----SGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWE 260
Score = 144 (55.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 42/122 (34%), Positives = 64/122 (52%)
Query: 146 SVKFSTDGQELVAAGSDN-FIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSD 204
SV+ +T +EL+ AGS + I V+DL+A K + HK+++ ++ F G + SGS
Sbjct: 68 SVRLNTP-EELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDF-HPYGEFVASGSQ 125
Query: 205 DSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR--KM 262
D+ K+WD R KG GH + + + DG++ S D T KLWD+ KM
Sbjct: 126 DTNIKLWDIR---RKGCVFRY-RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM 181
Query: 263 SS 264
S
Sbjct: 182 MS 183
Score = 139 (54.0 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 49/214 (22%), Positives = 93/214 (43%)
Query: 179 IPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDS 238
I AH S+V+++ +G L+ +G DD +W I+K L GH + +
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWS----INKPNCIMSLTGHTSPVESVRL 71
Query: 239 RRDGRYFISNGKDQTTKLWDIRKMSSNTT---DNSRLRDYDWD-Y-RWMEYPSYARRLKH 293
++ + + ++WD+ T + + D+ Y ++ S +K
Sbjct: 72 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 294 ---PHDQSLATYKGHSVLRTLIRCY-FSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAK 349
+ Y+GHS +RC FSP+ K++ + + D++V ++DL +G +++
Sbjct: 132 WDIRRKGCVFRYRGHS---QAVRCLRFSPD----GKWLASAADDHTVKLWDLTAGKMMSE 184
Query: 350 LDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWEI 383
H PV +HP +L S S D I W++
Sbjct: 185 FPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 154 (59.3 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 58/240 (24%), Positives = 98/240 (40%)
Query: 153 GQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWD 212
G+ L G D + ++ + C + + H S V +V + LI +GS +VWD
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRL-NTPEELIVAGSQSGSIRVWD 91
Query: 213 RRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSS-----NTT 267
+ + LMGH I +D G + S +D KLWDIR+ +
Sbjct: 92 ----LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHS 147
Query: 268 DNSRLRDYDWDYRWMEYPSYARRLKH---PHDQSLATYKGHSVLRTLIRCYFSP-EYSTA 323
R + D +W+ + +K + ++ + GH+ ++ F P EY A
Sbjct: 148 QAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVE--FHPNEYLLA 205
Query: 324 QKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDC-NIVRWE 382
+GSSD ++ +DL V+ ++ PVR ++P L S D + WE
Sbjct: 206 -----SGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWE 260
Score = 144 (55.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 42/122 (34%), Positives = 64/122 (52%)
Query: 146 SVKFSTDGQELVAAGSDN-FIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSD 204
SV+ +T +EL+ AGS + I V+DL+A K + HK+++ ++ F G + SGS
Sbjct: 68 SVRLNTP-EELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDF-HPYGEFVASGSQ 125
Query: 205 DSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR--KM 262
D+ K+WD R KG GH + + + DG++ S D T KLWD+ KM
Sbjct: 126 DTNIKLWDIR---RKGCVFRY-RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM 181
Query: 263 SS 264
S
Sbjct: 182 MS 183
Score = 139 (54.0 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 49/214 (22%), Positives = 93/214 (43%)
Query: 179 IPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDS 238
I AH S+V+++ +G L+ +G DD +W I+K L GH + +
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWS----INKPNCIMSLTGHTSPVESVRL 71
Query: 239 RRDGRYFISNGKDQTTKLWDIRKMSSNTT---DNSRLRDYDWD-Y-RWMEYPSYARRLKH 293
++ + + ++WD+ T + + D+ Y ++ S +K
Sbjct: 72 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 294 ---PHDQSLATYKGHSVLRTLIRCY-FSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAK 349
+ Y+GHS +RC FSP+ K++ + + D++V ++DL +G +++
Sbjct: 132 WDIRRKGCVFRYRGHS---QAVRCLRFSPD----GKWLASAADDHTVKLWDLTAGKMMSE 184
Query: 350 LDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWEI 383
H PV +HP +L S S D I W++
Sbjct: 185 FPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 154 (59.3 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 58/240 (24%), Positives = 98/240 (40%)
Query: 153 GQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWD 212
G+ L G D + ++ + C + + H S V +V + LI +GS +VWD
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRL-NTPEELIVAGSQSGSIRVWD 91
Query: 213 RRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSS-----NTT 267
+ + LMGH I +D G + S +D KLWDIR+ +
Sbjct: 92 ----LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHS 147
Query: 268 DNSRLRDYDWDYRWMEYPSYARRLKH---PHDQSLATYKGHSVLRTLIRCYFSP-EYSTA 323
R + D +W+ + +K + ++ + GH+ ++ F P EY A
Sbjct: 148 QAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVE--FHPNEYLLA 205
Query: 324 QKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDC-NIVRWE 382
+GSSD ++ +DL V+ ++ PVR ++P L S D + WE
Sbjct: 206 -----SGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWE 260
Score = 144 (55.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 42/122 (34%), Positives = 64/122 (52%)
Query: 146 SVKFSTDGQELVAAGSDN-FIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSD 204
SV+ +T +EL+ AGS + I V+DL+A K + HK+++ ++ F G + SGS
Sbjct: 68 SVRLNTP-EELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDF-HPYGEFVASGSQ 125
Query: 205 DSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR--KM 262
D+ K+WD R KG GH + + + DG++ S D T KLWD+ KM
Sbjct: 126 DTNIKLWDIR---RKGCVFRY-RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM 181
Query: 263 SS 264
S
Sbjct: 182 MS 183
Score = 139 (54.0 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 49/214 (22%), Positives = 93/214 (43%)
Query: 179 IPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDS 238
I AH S+V+++ +G L+ +G DD +W I+K L GH + +
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWS----INKPNCIMSLTGHTSPVESVRL 71
Query: 239 RRDGRYFISNGKDQTTKLWDIRKMSSNTT---DNSRLRDYDWD-Y-RWMEYPSYARRLKH 293
++ + + ++WD+ T + + D+ Y ++ S +K
Sbjct: 72 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 294 ---PHDQSLATYKGHSVLRTLIRCY-FSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAK 349
+ Y+GHS +RC FSP+ K++ + + D++V ++DL +G +++
Sbjct: 132 WDIRRKGCVFRYRGHS---QAVRCLRFSPD----GKWLASAADDHTVKLWDLTAGKMMSE 184
Query: 350 LDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWEI 383
H PV +HP +L S S D I W++
Sbjct: 185 FPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 154 (59.3 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 58/240 (24%), Positives = 98/240 (40%)
Query: 153 GQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWD 212
G+ L G D + ++ + C + + H S V +V + LI +GS +VWD
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRL-NTPEELIVAGSQSGSIRVWD 91
Query: 213 RRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSS-----NTT 267
+ + LMGH I +D G + S +D KLWDIR+ +
Sbjct: 92 ----LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHS 147
Query: 268 DNSRLRDYDWDYRWMEYPSYARRLKH---PHDQSLATYKGHSVLRTLIRCYFSP-EYSTA 323
R + D +W+ + +K + ++ + GH+ ++ F P EY A
Sbjct: 148 QAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVE--FHPNEYLLA 205
Query: 324 QKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDC-NIVRWE 382
+GSSD ++ +DL V+ ++ PVR ++P L S D + WE
Sbjct: 206 -----SGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSILFNPDGCCLYSGCQDSLRVYGWE 260
Score = 144 (55.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 42/122 (34%), Positives = 64/122 (52%)
Query: 146 SVKFSTDGQELVAAGSDN-FIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSD 204
SV+ +T +EL+ AGS + I V+DL+A K + HK+++ ++ F G + SGS
Sbjct: 68 SVRLNTP-EELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDF-HPYGEFVASGSQ 125
Query: 205 DSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR--KM 262
D+ K+WD R KG GH + + + DG++ S D T KLWD+ KM
Sbjct: 126 DTNIKLWDIR---RKGCVFRY-RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM 181
Query: 263 SS 264
S
Sbjct: 182 MS 183
Score = 139 (54.0 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 49/214 (22%), Positives = 93/214 (43%)
Query: 179 IPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDS 238
I AH S+V+++ +G L+ +G DD +W I+K L GH + +
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWS----INKPNCIMSLTGHTSPVESVRL 71
Query: 239 RRDGRYFISNGKDQTTKLWDIRKMSSNTT---DNSRLRDYDWD-Y-RWMEYPSYARRLKH 293
++ + + ++WD+ T + + D+ Y ++ S +K
Sbjct: 72 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 294 ---PHDQSLATYKGHSVLRTLIRCY-FSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAK 349
+ Y+GHS +RC FSP+ K++ + + D++V ++DL +G +++
Sbjct: 132 WDIRRKGCVFRYRGHS---QAVRCLRFSPD----GKWLASAADDHTVKLWDLTAGKMMSE 184
Query: 350 LDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWEI 383
H PV +HP +L S S D I W++
Sbjct: 185 FPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
>DICTYBASE|DDB_G0286457 [details] [associations]
symbol:strap "putative serine-threonine kinase
receptor-associated protein" species:44689 "Dictyostelium
discoideum" [GO:0005575 "cellular_component" evidence=ND]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0286457
GenomeReviews:CM000153_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000085 GO:GO:0030512
InterPro:IPR013979 Pfam:PF08662 KO:K13137 OMA:LWQTTVG
RefSeq:XP_637742.1 ProteinModelPortal:Q54LT8
EnsemblProtists:DDB0233062 GeneID:8625608 KEGG:ddi:DDB_G0286457
InParanoid:Q54LT8 ProtClustDB:CLSZ2430103 Uniprot:Q54LT8
Length = 293
Score = 135 (52.6 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 60/247 (24%), Positives = 108/247 (43%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
++S +F++ + + A +D + ++D L I H+S V T F++ ++ GS
Sbjct: 59 VWSSRFNSTASQALTASADYTVKLWDTLNGSEILSIE-HQSIVKTADFSNNNSRVVTGGS 117
Query: 204 DDSLCKVWDRRCFISKGRANGVLM---GHLEGI-TFIDSRRDGRYFISNGKDQTTKLWDI 259
+ L +++D R N L+ GH I T S + +S G D+ ++WD+
Sbjct: 118 EKIL-RIFDLE------RPNDPLLQISGHTNTIKTATWSVHNDDIVLSGGLDEVIRIWDL 170
Query: 260 R---KMSSNTTDNSRLRDYDWDYRWMEYPSYARRLKHPHDQSLATYKGHSVLRTLIRCY- 315
R ++S + ++ D R++ + + QS K +S L + C
Sbjct: 171 RSGTQVSLCAKSSITSMEFSKDRRFL-VTTAGNEVTFWDAQSFYPLKVYS-LPFDVNCAS 228
Query: 316 FSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWD 375
P+ S K+I G SD V++YD +G ++ H+ PV C + P S S D
Sbjct: 229 LHPDNS---KFI-AGGSDFWVHVYDFSTGNEIEVNKGHHGPVNCCRFSPDGASFASGSLD 284
Query: 376 CNIVRWE 382
I W+
Sbjct: 285 GTIRLWK 291
Score = 52 (23.4 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 11/40 (27%), Positives = 23/40 (57%)
Query: 31 NGPW--KVDGMNSRVYTSQFSNDGSFFVAASQESNIKVYN 68
NG W +G V++S+F++ S + AS + +K+++
Sbjct: 45 NGDWIGTFEGHKGAVWSSRFNSTASQALTASADYTVKLWD 84
Score = 39 (18.8 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 33 PWKVDGMNSRVYTSQFSN---DGSFFVAASQESNIKVYNVDK-NW 73
P G + V FSN DGSF V+A + + + N + +W
Sbjct: 4 PLICSGHSRPVSDLSFSNENSDGSFIVSACLDGSPMLRNGENGDW 48
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 138 (53.6 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 37/130 (28%), Positives = 68/130 (52%)
Query: 153 GQELVAAGSDNF-IYVYDLQANKCSL-RIPAHKSDVNTVCFADETGHLIFSGSDDSLCKV 210
G E + +GSD+F ++++ +K L R+ H++ +N V F+ ++ +I S S D K+
Sbjct: 291 GPERLVSGSDDFTLFMWSPAEDKKPLARMTGHQALINQVLFSPDS-RIIASASFDKSIKL 349
Query: 211 WDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR--KMSSNTTD 268
WD R G+ L GH+ + I D R +S D T K+WD++ K++++
Sbjct: 350 WDGRT----GKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPG 405
Query: 269 NS-RLRDYDW 277
++ + DW
Sbjct: 406 HADEVYAVDW 415
Score = 131 (51.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 35/114 (30%), Positives = 58/114 (50%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
I V FS D + + +A D I ++D + K + H + V + ++ ++ L+ SGS
Sbjct: 326 INQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADS-RLLVSGS 384
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
DS KVWD + K A+ L GH + + +D DG+ S GKD+ ++W
Sbjct: 385 SDSTLKVWDVKA--QKLAAD--LPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 434
Score = 110 (43.8 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 49/188 (26%), Positives = 81/188 (43%)
Query: 134 SADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFAD 193
S +G + + SV FS G+ L + D + +DL H+ V ++ ++
Sbjct: 60 SLEGHSE--AVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSP 117
Query: 194 ETGHLIFSGSDDSLCKVWDRRCFISKGRANG-VLMGHLEGITFID-----SRRDGRYFIS 247
+ G + SG + +WD S G+ G VL GH + IT + + + RY S
Sbjct: 118 D-GKTLASGCKNGQILLWDP----STGKQVGRVLAGHSKWITGLSWEPLHANPECRYMAS 172
Query: 248 NGKDQTTKLWDI------RKMSSNTTDNSRLRDYDWDYRWMEYP-SYARRLK--HPHDQS 298
+ KD + ++WD R ++ +T + LR W + Y S R +K HD
Sbjct: 173 SSKDGSVRVWDTTAGRCERILTGHTQSVTCLR---WGGDGLLYSASQDRTIKVWRAHDGV 229
Query: 299 LA-TYKGH 305
L T +GH
Sbjct: 230 LCRTLQGH 237
Score = 86 (35.3 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 25/85 (29%), Positives = 40/85 (47%)
Query: 299 LATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVR 358
LA GH L + + FSP+ + I + S D S+ ++D +G +A L H A V
Sbjct: 316 LARMTGHQAL--INQVLFSPD----SRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVY 369
Query: 359 DCCWHPIYPMLISSSWDCNIVRWEI 383
W +L+S S D + W++
Sbjct: 370 QIAWSADSRLLVSGSSDSTLKVWDV 394
Score = 58 (25.5 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 16/66 (24%), Positives = 31/66 (46%)
Query: 299 LATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVR 358
LA+ +GH + + +S + + +GSSD+++ ++D+ + A L H V
Sbjct: 358 LASLRGH------VAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVY 411
Query: 359 DCCWHP 364
W P
Sbjct: 412 AVDWSP 417
>UNIPROTKB|F1RKU4 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001162 "positive regulation of histone H3-K79
methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GeneTree:ENSGT00700000104507
GO:GO:0055087 EMBL:CU467054 Ensembl:ENSSSCT00000001963 OMA:PPSEVWG
Uniprot:F1RKU4
Length = 287
Score = 147 (56.8 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 32/128 (25%), Positives = 63/128 (49%)
Query: 132 DFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCF 191
++S D +F I S+ +S DG+ L + D I ++D+ K + H + ++ F
Sbjct: 123 EYSLD-TRGKF-ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTF 180
Query: 192 ADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKD 251
+ ++ L+ + SDD K++D + G L GH + + D +F+S+ D
Sbjct: 181 SPDS-QLLVTASDDGYIKIYD----VQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSD 235
Query: 252 QTTKLWDI 259
++ K+WD+
Sbjct: 236 KSVKVWDV 243
Score = 145 (56.1 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 47/171 (27%), Positives = 74/171 (43%)
Query: 88 ITDTSLSPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSV 147
I + SPD ++L +I I+NI D+ + +H + +G I S+
Sbjct: 133 ILSIAYSPDGKYLASGAIDGIINIFDIATGK-------LLH-----TLEGHA--MPIRSL 178
Query: 148 KFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSL 207
FS D Q LV A D +I +YD+Q + + H S V V F + H + S SD S+
Sbjct: 179 TFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSV 238
Query: 208 CKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWD 258
KVWD + H + + + +G +S G DQ ++D
Sbjct: 239 -KVWD----VGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 284
Score = 116 (45.9 bits), Expect = 0.00035, P = 0.00035
Identities = 37/151 (24%), Positives = 73/151 (48%)
Query: 63 NIKVYNVDKNWKIQKDIETKAL-RWTITDTSLSPDQRFLVYASICAIVNIVDVGSSARES 121
++++++++ N K K I+ + WT+ + SPD ++L + VNI V S +E
Sbjct: 69 SVRLWDLE-NGKQIKSIDAGPVDAWTL---AFSPDSQYLATGTHVGKVNIFGVESGKKE- 123
Query: 122 LANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPA 181
+S D +F I S+ +S DG+ L + D I ++D+ K +
Sbjct: 124 -----------YSLD-TRGKF-ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEG 170
Query: 182 HKSDVNTVCFADETGHLIFSGSDDSLCKVWD 212
H + ++ F+ ++ L+ + SDD K++D
Sbjct: 171 HAMPIRSLTFSPDS-QLLVTASDDGYIKIYD 200
>FB|FBgn0004623 [details] [associations]
symbol:Gbeta76C "G protein beta-subunit 76C" species:7227
"Drosophila melanogaster" [GO:0016059 "deactivation of rhodopsin
mediated signaling" evidence=IMP;TAS] [GO:0016056 "rhodopsin
mediated signaling pathway" evidence=IMP] [GO:0003924 "GTPase
activity" evidence=NAS;IMP] [GO:0007602 "phototransduction"
evidence=IDA;IMP] [GO:0016028 "rhabdomere" evidence=IDA;TAS]
[GO:0005834 "heterotrimeric G-protein complex"
evidence=NAS;IDA;IPI] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=NAS] [GO:0007202 "activation of
phospholipase C activity" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005737 EMBL:AE014296 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007601
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0007202 GO:GO:0016028 GO:GO:0016056
PRINTS:PR00319 GO:GO:0016059 GO:GO:0005834
GeneTree:ENSGT00550000074331 InterPro:IPR016346 PIRSF:PIRSF002394
KO:K07972 EMBL:M76593 EMBL:AY118886 PIR:JU0269 RefSeq:NP_523720.2
UniGene:Dm.9760 ProteinModelPortal:P29829 SMR:P29829 IntAct:P29829
MINT:MINT-938155 STRING:P29829 PaxDb:P29829
EnsemblMetazoa:FBtr0074949 GeneID:40148 KEGG:dme:Dmel_CG8770
CTD:40148 FlyBase:FBgn0004623 InParanoid:P29829 OMA:KGHINKV
OrthoDB:EOG4SJ3W9 PhylomeDB:P29829 ChiTaRS:Gbeta76C
GenomeRNAi:40148 NextBio:817248 Bgee:P29829 GermOnline:CG8770
Uniprot:P29829
Length = 346
Score = 149 (57.5 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 59/252 (23%), Positives = 96/252 (38%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCS------LRIPAHKSDVNTVCFADETGH 197
+ +V FS G + G DN VYD+ S + ++ +++ F D+ GH
Sbjct: 104 VMTVAFSPSGNFVACGGMDNQCTVYDVNNRDASGVAKMVKELMGYEGFLSSCRFLDD-GH 162
Query: 198 LIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
LI D +C WD + KG GH I + D + +I+ D+T KLW
Sbjct: 163 LITGSGDMKICH-WD----LEKGVKTMDFNGHAGDIAGLSLSPDMKTYITGSVDKTAKLW 217
Query: 258 DIRKMS------SNTTDNSRL--RDYDWDYRWMEYPSYARRLKHPHDQSLATYKGHSVLR 309
D+R+ + D S + + + AR DQ +A Y+
Sbjct: 218 DVREEGHKQMFFGHDMDVSSVCYHPSGFGFASCSEDQTARMYDLRADQQIAQYEPPQKNT 277
Query: 310 TLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPML 369
C S T+ +Y+ G + +V+ +D + L H + P L
Sbjct: 278 GFTSCALS----TSGRYLMCGGIEGNVHSWDTMKQRHTGTLSGHENRITCISLCPNGMCL 333
Query: 370 ISSSWDCNIVRW 381
S+SWD + W
Sbjct: 334 ASTSWDQQVRLW 345
>UNIPROTKB|Q5ZME8 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9031 "Gallus gallus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GeneTree:ENSGT00700000104461 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 KO:K13111 OMA:NGHWDTV OrthoDB:EOG49ZXP0
EMBL:AJ719436 IPI:IPI00571757 RefSeq:NP_001007980.1
UniGene:Gga.5532 ProteinModelPortal:Q5ZME8 PRIDE:Q5ZME8
Ensembl:ENSGALT00000003135 GeneID:427377 KEGG:gga:427377
InParanoid:Q5ZME8 NextBio:20828644 Uniprot:Q5ZME8
Length = 513
Score = 151 (58.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 48/176 (27%), Positives = 77/176 (43%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQ 97
G S V ++FS DG + V S + I+V+N KI+KD++ +A D + D
Sbjct: 212 GQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTG-KIRKDLKYQA-----QDNFMMMDD 265
Query: 98 RFLVYASICAIVNIVDVGSSARESLANV-TIHKGLDFSADGDEDEFGIFSVKFSTDGQEL 156
L +C + + + A++ V I G G+ + FS D ++
Sbjct: 266 AVLC---MCFSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQI 322
Query: 157 VAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWD 212
++A D I ++ L++ K H S VN F + GH I S S D KVW+
Sbjct: 323 LSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQD-GHYIISASSDGTVKVWN 377
Score = 127 (49.8 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 43/178 (24%), Positives = 76/178 (42%)
Query: 94 SPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGD---EDEFGIFSVKFS 150
SPD ++LV S+ + + + + I K L + A + D+ + + FS
Sbjct: 223 SPDGQYLVTGSVDGFIEVWNFTTGK--------IRKDLKYQAQDNFMMMDD-AVLCMCFS 273
Query: 151 TDGQELVAAGSDNFIYVYDLQANKCSLRIP-AHKSDVNTVCFADETGHLIFSGSDDSLCK 209
D + L D I V+ +Q+ +C R AH V + F+ ++ ++ S S D +
Sbjct: 274 RDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQIL-SASFDQTIR 332
Query: 210 VWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMS-SNT 266
+ + G+ GH + +DG Y IS D T K+W+++ SNT
Sbjct: 333 IHG----LKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKVWNVKTTECSNT 386
Score = 43 (20.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 293 HPHDQSLATYKGHSVLR 309
HPH +ATY +L+
Sbjct: 493 HPHQNLIATYSEDGLLK 509
>UNIPROTKB|Q2TBS9 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GeneTree:ENSGT00700000104461 EMBL:BC109712 IPI:IPI00726295
RefSeq:NP_001033662.1 UniGene:Bt.25206 ProteinModelPortal:Q2TBS9
SMR:Q2TBS9 STRING:Q2TBS9 PRIDE:Q2TBS9 Ensembl:ENSBTAT00000020865
GeneID:540842 KEGG:bta:540842 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 InParanoid:Q2TBS9 KO:K13111 OMA:NGHWDTV
OrthoDB:EOG49ZXP0 NextBio:20878868 Uniprot:Q2TBS9
Length = 513
Score = 151 (58.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 47/178 (26%), Positives = 78/178 (43%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQ 97
G S V ++FS DG + V S + I+V+N KI+KD++ +A D + D
Sbjct: 212 GQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTG-KIRKDLKYQA-----QDNFMMMDD 265
Query: 98 RFLVYASICAIVNIVDVGSSARESLANV-TIHKGLDFSADGDEDEFGIFSVKFSTDGQEL 156
L +C + + + A++ V I G G+ + FS D ++
Sbjct: 266 AVLC---MCFSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQI 322
Query: 157 VAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRR 214
++A D I ++ L++ K H S VN F + GH I S S D K+W+ +
Sbjct: 323 LSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQD-GHYIISASSDGTVKIWNMK 379
Score = 126 (49.4 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 43/178 (24%), Positives = 76/178 (42%)
Query: 94 SPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGD---EDEFGIFSVKFS 150
SPD ++LV S+ + + + + I K L + A + D+ + + FS
Sbjct: 223 SPDGQYLVTGSVDGFIEVWNFTTGK--------IRKDLKYQAQDNFMMMDD-AVLCMCFS 273
Query: 151 TDGQELVAAGSDNFIYVYDLQANKCSLRIP-AHKSDVNTVCFADETGHLIFSGSDDSLCK 209
D + L D I V+ +Q+ +C R AH V + F+ ++ ++ S S D +
Sbjct: 274 RDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQIL-SASFDQTIR 332
Query: 210 VWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMS-SNT 266
+ + G+ GH + +DG Y IS D T K+W+++ SNT
Sbjct: 333 IHG----LKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTECSNT 386
Score = 43 (20.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 293 HPHDQSLATYKGHSVLR 309
HPH +ATY +L+
Sbjct: 493 HPHQNLIATYSEDGLLK 509
>UNIPROTKB|Q2TAY7 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL162590 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
CTD:55234 HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111
OMA:NGHWDTV OrthoDB:EOG49ZXP0 EMBL:AK001667 EMBL:AK022032
EMBL:BC002876 EMBL:BC110654 IPI:IPI00305833 RefSeq:NP_060695.2
UniGene:Hs.655351 ProteinModelPortal:Q2TAY7 SMR:Q2TAY7
IntAct:Q2TAY7 MINT:MINT-256588 STRING:Q2TAY7 PhosphoSite:Q2TAY7
DMDM:109939732 PaxDb:Q2TAY7 PeptideAtlas:Q2TAY7 PRIDE:Q2TAY7
DNASU:55234 Ensembl:ENST00000397149 GeneID:55234 KEGG:hsa:55234
UCSC:uc003zsf.1 GeneCards:GC09M033041 HGNC:HGNC:18247 HPA:HPA019228
HPA:HPA019708 neXtProt:NX_Q2TAY7 PharmGKB:PA134903890
PhylomeDB:Q2TAY7 ChiTaRS:SMU1 GenomeRNAi:55234 NextBio:59249
ArrayExpress:Q2TAY7 Bgee:Q2TAY7 CleanEx:HS_SMU1
Genevestigator:Q2TAY7 GermOnline:ENSG00000122692 Uniprot:Q2TAY7
Length = 513
Score = 151 (58.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 47/178 (26%), Positives = 78/178 (43%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQ 97
G S V ++FS DG + V S + I+V+N KI+KD++ +A D + D
Sbjct: 212 GQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTG-KIRKDLKYQA-----QDNFMMMDD 265
Query: 98 RFLVYASICAIVNIVDVGSSARESLANV-TIHKGLDFSADGDEDEFGIFSVKFSTDGQEL 156
L +C + + + A++ V I G G+ + FS D ++
Sbjct: 266 AVLC---MCFSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQI 322
Query: 157 VAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRR 214
++A D I ++ L++ K H S VN F + GH I S S D K+W+ +
Sbjct: 323 LSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQD-GHYIISASSDGTVKIWNMK 379
Score = 126 (49.4 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 43/178 (24%), Positives = 76/178 (42%)
Query: 94 SPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGD---EDEFGIFSVKFS 150
SPD ++LV S+ + + + + I K L + A + D+ + + FS
Sbjct: 223 SPDGQYLVTGSVDGFIEVWNFTTGK--------IRKDLKYQAQDNFMMMDD-AVLCMCFS 273
Query: 151 TDGQELVAAGSDNFIYVYDLQANKCSLRIP-AHKSDVNTVCFADETGHLIFSGSDDSLCK 209
D + L D I V+ +Q+ +C R AH V + F+ ++ ++ S S D +
Sbjct: 274 RDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQIL-SASFDQTIR 332
Query: 210 VWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMS-SNT 266
+ + G+ GH + +DG Y IS D T K+W+++ SNT
Sbjct: 333 IHG----LKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTECSNT 386
Score = 43 (20.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 293 HPHDQSLATYKGHSVLR 309
HPH +ATY +L+
Sbjct: 493 HPHQNLIATYSEDGLLK 509
>MGI|MGI:1915546 [details] [associations]
symbol:Smu1 "smu-1 suppressor of mec-8 and unc-52 homolog
(C. elegans)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
MGI:MGI:1915546 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
CTD:55234 HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111
OMA:NGHWDTV OrthoDB:EOG49ZXP0 EMBL:AB044414 EMBL:AK003493
EMBL:AK011140 EMBL:AK145982 EMBL:AK159635 EMBL:AK168813
EMBL:BC057446 IPI:IPI00331342 IPI:IPI00760034 RefSeq:NP_067510.3
UniGene:Mm.289929 ProteinModelPortal:Q3UKJ7 SMR:Q3UKJ7
STRING:Q3UKJ7 PhosphoSite:Q3UKJ7 PaxDb:Q3UKJ7 PRIDE:Q3UKJ7
Ensembl:ENSMUST00000030117 GeneID:74255 KEGG:mmu:74255
UCSC:uc008shv.2 InParanoid:Q3UKJ7 NextBio:340258 Bgee:Q3UKJ7
Genevestigator:Q3UKJ7 GermOnline:ENSMUSG00000028409 Uniprot:Q3UKJ7
Length = 513
Score = 151 (58.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 47/178 (26%), Positives = 78/178 (43%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQ 97
G S V ++FS DG + V S + I+V+N KI+KD++ +A D + D
Sbjct: 212 GQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTG-KIRKDLKYQA-----QDNFMMMDD 265
Query: 98 RFLVYASICAIVNIVDVGSSARESLANV-TIHKGLDFSADGDEDEFGIFSVKFSTDGQEL 156
L +C + + + A++ V I G G+ + FS D ++
Sbjct: 266 AVLC---MCFSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQI 322
Query: 157 VAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRR 214
++A D I ++ L++ K H S VN F + GH I S S D K+W+ +
Sbjct: 323 LSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQD-GHYIISASSDGTVKIWNMK 379
Score = 126 (49.4 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 43/178 (24%), Positives = 76/178 (42%)
Query: 94 SPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGD---EDEFGIFSVKFS 150
SPD ++LV S+ + + + + I K L + A + D+ + + FS
Sbjct: 223 SPDGQYLVTGSVDGFIEVWNFTTGK--------IRKDLKYQAQDNFMMMDD-AVLCMCFS 273
Query: 151 TDGQELVAAGSDNFIYVYDLQANKCSLRIP-AHKSDVNTVCFADETGHLIFSGSDDSLCK 209
D + L D I V+ +Q+ +C R AH V + F+ ++ ++ S S D +
Sbjct: 274 RDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQIL-SASFDQTIR 332
Query: 210 VWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMS-SNT 266
+ + G+ GH + +DG Y IS D T K+W+++ SNT
Sbjct: 333 IHG----LKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTECSNT 386
Score = 43 (20.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 293 HPHDQSLATYKGHSVLR 309
HPH +ATY +L+
Sbjct: 493 HPHQNLIATYSEDGLLK 509
>RGD|620694 [details] [associations]
symbol:Smu1 "smu-1 suppressor of mec-8 and unc-52 homolog (C.
elegans)" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620694
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 KO:K13111 OrthoDB:EOG49ZXP0 EMBL:AY029526
IPI:IPI00197468 RefSeq:NP_476543.1 UniGene:Rn.54978
ProteinModelPortal:Q99M63 STRING:Q99M63 PRIDE:Q99M63 GeneID:117541
KEGG:rno:117541 UCSC:RGD:620694 InParanoid:Q99M63 NextBio:620357
Genevestigator:Q99M63 GermOnline:ENSRNOG00000007671 Uniprot:Q99M63
Length = 513
Score = 151 (58.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 47/178 (26%), Positives = 78/178 (43%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQ 97
G S V ++FS DG + V S + I+V+N KI+KD++ +A D + D
Sbjct: 212 GQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTG-KIRKDLKYQA-----QDNFMMMDD 265
Query: 98 RFLVYASICAIVNIVDVGSSARESLANV-TIHKGLDFSADGDEDEFGIFSVKFSTDGQEL 156
L +C + + + A++ V I G G+ + FS D ++
Sbjct: 266 AVLC---MCFSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQI 322
Query: 157 VAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRR 214
++A D I ++ L++ K H S VN F + GH I S S D K+W+ +
Sbjct: 323 LSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQD-GHYIISASSDGTVKIWNMK 379
Score = 126 (49.4 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 43/178 (24%), Positives = 76/178 (42%)
Query: 94 SPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGD---EDEFGIFSVKFS 150
SPD ++LV S+ + + + + I K L + A + D+ + + FS
Sbjct: 223 SPDGQYLVTGSVDGFIEVWNFTTGK--------IRKDLKYQAQDNFMMMDD-AVLCMCFS 273
Query: 151 TDGQELVAAGSDNFIYVYDLQANKCSLRIP-AHKSDVNTVCFADETGHLIFSGSDDSLCK 209
D + L D I V+ +Q+ +C R AH V + F+ ++ ++ S S D +
Sbjct: 274 RDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQIL-SASFDQTIR 332
Query: 210 VWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMS-SNT 266
+ + G+ GH + +DG Y IS D T K+W+++ SNT
Sbjct: 333 IHG----LKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTECSNT 386
Score = 43 (20.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 293 HPHDQSLATYKGHSVLR 309
HPH +ATY +L+
Sbjct: 493 HPHQNLIATYSEDGLLK 509
>TAIR|locus:2172084 [details] [associations]
symbol:AT5G54520 "AT5G54520" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0048573 "photoperiodism, flowering" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0080008 IPI:IPI00547624 RefSeq:NP_200263.2
UniGene:At.29492 ProteinModelPortal:F4K0D3 SMR:F4K0D3 PRIDE:F4K0D3
EnsemblPlants:AT5G54520.1 GeneID:835540 KEGG:ath:AT5G54520
OMA:PPFKLNK Uniprot:F4K0D3
Length = 457
Score = 151 (58.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 68/260 (26%), Positives = 116/260 (44%)
Query: 147 VKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSD--VNTVCFADETGHLIFSGSD 204
VK+S G L++ G D ++D++ + + K D V V F + ++ SG
Sbjct: 211 VKWSKQGLSLLSCGYDCTSRLFDVERG---VETQSFKEDEVVGVVKFHPDNCNVFLSGGS 267
Query: 205 DSLCKVWDRRC--FISKGRANGVLMGHLEGITFIDSRRDGRYFISN----GK---DQTTK 255
++WD R F+ + + +G + + FI G+ FIS+ G+ +
Sbjct: 268 KGSLRLWDIRANKFVHEYVRD---LGPILDVEFIAG---GKQFISSSDVSGRNISENAVI 321
Query: 256 LWDI-RKMS-SN-------TTDNSRLRDYDWDYRWMEYPSYARRLKHPHDQSLATYK--- 303
+WDI R++ SN T + D + + +Y L YK
Sbjct: 322 VWDISREVPLSNQVYVEAYTCPCIKRHPQDPVFIAQSHGNYTAIFSTNPPFKLNKYKRFE 381
Query: 304 GHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWH 363
GH V I+C FSP+ T + +GSSD SVY+YD S A + KL + P + +H
Sbjct: 382 GHWVAGFPIKCNFSPDGET----LASGSSDGSVYMYDYKSTALIKKLKAYEQPCVNVSYH 437
Query: 364 PIYPMLISS-SWDCNIVRWE 382
P+ P ++++ SW+ + +E
Sbjct: 438 PVLPNVVAACSWNGQVSVFE 457
>UNIPROTKB|H0YN81 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC090607 HGNC:HGNC:30300 ChiTaRS:WDR61
Ensembl:ENST00000560569 Bgee:H0YN81 Uniprot:H0YN81
Length = 294
Score = 147 (56.8 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 32/128 (25%), Positives = 63/128 (49%)
Query: 132 DFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCF 191
++S D +F I S+ +S DG+ L + D I ++D+ K + H + ++ F
Sbjct: 141 EYSLD-TRGKF-ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTF 198
Query: 192 ADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKD 251
+ ++ L+ + SDD K++D + G L GH + + D +F+S+ D
Sbjct: 199 SPDS-QLLVTASDDGYIKIYD----VQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSD 253
Query: 252 QTTKLWDI 259
++ K+WD+
Sbjct: 254 KSVKVWDV 261
Score = 137 (53.3 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 43/180 (23%), Positives = 86/180 (47%)
Query: 34 WKVDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKAL-RWTITDTS 92
W ++G V + S+ ++S +++I++++++ N K K I+ + WT+ +
Sbjct: 58 WSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLE-NGKQIKSIDAGPVDAWTL---A 113
Query: 93 LSPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTD 152
SPD ++L + VNI V S +E +S D +F I S+ +S D
Sbjct: 114 FSPDSQYLATGTHVGKVNIFGVESGKKE------------YSLD-TRGKF-ILSIAYSPD 159
Query: 153 GQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWD 212
G+ L + D I ++D+ K + H + ++ F+ ++ L+ + SDD K++D
Sbjct: 160 GKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDS-QLLVTASDDGYIKIYD 218
Score = 134 (52.2 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 40/125 (32%), Positives = 59/125 (47%)
Query: 88 ITDTSLSPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSV 147
I + SPD ++L +I I+NI D+ + +H + +G I S+
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGK-------LLH-----TLEGHA--MPIRSL 196
Query: 148 KFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSL 207
FS D Q LV A D +I +YD+Q + + H S V V F + H + S SD S+
Sbjct: 197 TFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSV 256
Query: 208 CKVWD 212
KVWD
Sbjct: 257 -KVWD 260
Score = 118 (46.6 bits), Expect = 0.00022, P = 0.00022
Identities = 45/193 (23%), Positives = 79/193 (40%)
Query: 194 ETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQT 253
E + +GS D L KVW R + L GH G+ +D S+ D
Sbjct: 30 ENSETVVTGSLDDLVKVWKWRD--ERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAH 87
Query: 254 TKLWDIRKMSSNTTDNSRLRDYDWDYRWMEYPSYARRLKHPHDQSL---ATYKGHSVLRT 310
+LWD+ + ++ D W + Y H ++ + K L T
Sbjct: 88 IRLWDLENGKQIKSIDAGPVDA-WTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDT 146
Query: 311 LIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLI 370
+ S YS KY+ +G+ D + I+D+ +G + L+ H P+R + P +L+
Sbjct: 147 RGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLV 206
Query: 371 SSSWDCNIVRWEI 383
++S D I +++
Sbjct: 207 TASDDGYIKIYDV 219
>MGI|MGI:1915086 [details] [associations]
symbol:Wdr83 "WD repeat domain containing 83" species:10090
"Mus musculus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1915086 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:AY365434 EMBL:AK005790 EMBL:AK020654 EMBL:BC005587
EMBL:BC019369 EMBL:BC094624 IPI:IPI00118714 IPI:IPI00407931
IPI:IPI00624217 RefSeq:NP_080675.2 UniGene:Mm.334680
ProteinModelPortal:Q9DAJ4 SMR:Q9DAJ4 STRING:Q9DAJ4
PhosphoSite:Q9DAJ4 PRIDE:Q9DAJ4 Ensembl:ENSMUST00000093357
Ensembl:ENSMUST00000149050 GeneID:67836 KEGG:mmu:67836
UCSC:uc009mph.1 InParanoid:Q9DAJ4 NextBio:325661 Bgee:Q9DAJ4
CleanEx:MM_1500041N16RIK Genevestigator:Q9DAJ4
GermOnline:ENSMUSG00000005150 Uniprot:Q9DAJ4
Length = 315
Score = 145 (56.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 57/229 (24%), Positives = 96/229 (41%)
Query: 150 STDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCK 209
S D L + G D + ++D+ + + H VNTV F +E +I SGS DS +
Sbjct: 76 SFDNSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEAT-VILSGSIDSSVR 134
Query: 210 VWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR--KMSSNTT 267
WD C K L +GI+ + + ++ D + +D+R ++SS+
Sbjct: 135 CWD--CRSRKPEPVQTLDEARDGISSV--KVSDHEILAGSVDGRVRRYDLRMGQVSSDYV 190
Query: 268 DNS-RLRDYDWDYRWM---EYPSYARRLKHPHDQSLATYKGHSVLRTLIRCYFSPEYSTA 323
+ + D + S R L + L Y GH + + C S E T
Sbjct: 191 GSPITCTCFSRDGQCTLISSLDSTLRLLDKDTGELLGEYVGHKNQQYKLDCCLS-ERDT- 248
Query: 324 QKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISS 372
++ + S D V+ +DLV GA L + V+ +HP P L+++
Sbjct: 249 --HVVSCSEDGKVFFWDLVEGALALALPVGSNVVQSLAYHPTEPCLLTA 295
Score = 41 (19.5 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 9/41 (21%), Positives = 19/41 (46%)
Query: 28 LPVNGPWKVDGMNSRVYTSQFSNDGSFFVAASQESNIKVYN 68
LP +D V +F+ DG++ + + +K++N
Sbjct: 13 LPQKRMKTLDCSQGAVRAVRFNVDGNYCLTCGSDKTLKLWN 53
>DICTYBASE|DDB_G0278769 [details] [associations]
symbol:cstf1 "cleavage stimulation factor 50 kDa
subunit" species:44689 "Dictyostelium discoideum" [GO:0006396 "RNA
processing" evidence=ISS] [GO:0006379 "mRNA cleavage" evidence=ISS]
[GO:0006378 "mRNA polyadenylation" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0278769 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006378 GO:GO:0003723 EMBL:AAFI02000024
GO:GO:0006379 KO:K14406 OMA:TKFITTH RefSeq:XP_641951.1
ProteinModelPortal:Q54XS9 EnsemblProtists:DDB0233705 GeneID:8621683
KEGG:ddi:DDB_G0278769 InParanoid:Q54XS9 ProtClustDB:CLSZ2729098
Uniprot:Q54XS9
Length = 506
Score = 132 (51.5 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 61/233 (26%), Positives = 102/233 (43%)
Query: 46 SQFSNDGSFFVAASQESNIKVYNVDK--NWKIQKDIETK-------ALR------WTITD 90
++FS DG + S +++IK+ +V+K N+ K+ T+ +R I D
Sbjct: 175 AKFSWDGKYVATGSSDTSIKLLDVNKMRNYNQTKNETTEDSAPSRPVIRTFYDHTMPIND 234
Query: 91 TSLSPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFS 150
P L AS + D SS + S + +D GI S+ F
Sbjct: 235 LDFHPSAPILSSASKDGTIRFYDYKSSLKRSFKYI-------------QDTHGIRSINFH 281
Query: 151 TDGQELVAAGSDN-FIYVYDLQANKC--SLRIPAHK-SDVNTVCFADETGHLIFSGSDDS 206
G +L+ AG+D+ I +Y++ + + +I H +N V F+ + G++ S S D+
Sbjct: 282 PCG-DLILAGTDHQMIRLYNVNTFQSFTARKINEHHHGPINQVRFSLD-GNIFASCSKDN 339
Query: 207 LCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI 259
K+WD F N G E T + R+ +Y +S G+D KLW+I
Sbjct: 340 TIKIWDSNNFSLISTLNSP-HGGKEPTT-VQISRNQKYLLSCGRDSMIKLWEI 390
Score = 100 (40.3 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 35/128 (27%), Positives = 55/128 (42%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQAN-KCSLRIPAHKSDVNTVCFADETGHLIFSG 202
I + F L +A D I YD +++ K S + + ++ F G LI +G
Sbjct: 232 INDLDFHPSAPILSSASKDGTIRFYDYKSSLKRSFKYIQDTHGIRSINF-HPCGDLILAG 290
Query: 203 SDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKM 262
+D + ++++ F S A + H I + DG F S KD T K+WD
Sbjct: 291 TDHQMIRLYNVNTFQSF-TARKINEHHHGPINQVRFSLDGNIFASCSKDNTIKIWDSNNF 349
Query: 263 SSNTTDNS 270
S +T NS
Sbjct: 350 SLISTLNS 357
Score = 63 (27.2 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 19/60 (31%), Positives = 28/60 (46%)
Query: 317 SPEYSTAQKYIYTGSSDNSV-YIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWD 375
S ++ + YI T SV +Y+ + QV KL HN VR P+ L++ S D
Sbjct: 415 SATFNYTEDYIITNDEQPSVAVVYNSRTKEQVQKLTGHNNTVRYIAASPVENALMTCSLD 474
Score = 43 (20.2 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 7/33 (21%), Positives = 19/33 (57%)
Query: 319 EYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLD 351
+ S QKY+ + D+ + ++++ SG + ++
Sbjct: 368 QISRNQKYLLSCGRDSMIKLWEITSGRLIYSIN 400
>UNIPROTKB|Q32LN7 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9913
"Bos taurus" [GO:0080182 "histone H3-K4 trimethylation"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISS] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISS] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162
GeneTree:ENSGT00700000104507 GO:GO:0055087 EMBL:BC109495
IPI:IPI00695868 RefSeq:NP_001033186.1 UniGene:Bt.20040
ProteinModelPortal:Q32LN7 PRIDE:Q32LN7 Ensembl:ENSBTAT00000021203
GeneID:513208 KEGG:bta:513208 CTD:80349 HOGENOM:HOG000036765
HOVERGEN:HBG059813 InParanoid:Q32LN7 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW NextBio:20870747 Uniprot:Q32LN7
Length = 305
Score = 147 (56.8 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 32/128 (25%), Positives = 63/128 (49%)
Query: 132 DFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCF 191
++S D +F I S+ +S DG+ L + D I ++D+ K + H + ++ F
Sbjct: 141 EYSLD-TRGKF-ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTF 198
Query: 192 ADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKD 251
+ ++ L+ + SDD K++D + G L GH + + D +F+S+ D
Sbjct: 199 SPDS-QLLVTASDDGYIKIYD----VQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSD 253
Query: 252 QTTKLWDI 259
++ K+WD+
Sbjct: 254 KSVKVWDV 261
Score = 145 (56.1 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 47/171 (27%), Positives = 74/171 (43%)
Query: 88 ITDTSLSPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSV 147
I + SPD ++L +I I+NI D+ + +H + +G I S+
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGK-------LLH-----TLEGHA--MPIRSL 196
Query: 148 KFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSL 207
FS D Q LV A D +I +YD+Q + + H S V V F + H + S SD S+
Sbjct: 197 TFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSV 256
Query: 208 CKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWD 258
KVWD + H + + + +G +S G DQ ++D
Sbjct: 257 -KVWD----VGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 302
Score = 137 (53.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 43/180 (23%), Positives = 86/180 (47%)
Query: 34 WKVDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKAL-RWTITDTS 92
W ++G V + S+ ++S +++I++++++ N K K I+ + WT+ +
Sbjct: 58 WSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLE-NGKQIKSIDAGPVDAWTL---A 113
Query: 93 LSPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTD 152
SPD ++L + VNI V S +E +S D +F I S+ +S D
Sbjct: 114 FSPDSQYLATGTHVGKVNIFGVESGKKE------------YSLD-TRGKF-ILSIAYSPD 159
Query: 153 GQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWD 212
G+ L + D I ++D+ K + H + ++ F+ ++ L+ + SDD K++D
Sbjct: 160 GKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDS-QLLVTASDDGYIKIYD 218
Score = 122 (48.0 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 49/209 (23%), Positives = 85/209 (40%)
Query: 181 AHKSDVNTVCFAD---ETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFID 237
AH + +V + E + +GS D L KVW R K L GH G+ +D
Sbjct: 14 AHDDAIWSVAWGSNKKENSETVVTGSLDDLVKVWKWRD--EKLDLQWSLEGHQLGVVSVD 71
Query: 238 SRRDGRYFISNGKDQTTKLWDIRKMSSNTTDNSRLRDYDWDYRWMEYPSYARRLKHPHDQ 297
S+ D +LWD+ + ++ D W + Y H
Sbjct: 72 ISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDA-WTLAFSPDSQYLATGTHVGKV 130
Query: 298 SL---ATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHN 354
++ + K L T + S YS KY+ +G+ D + I+D+ +G + L+ H
Sbjct: 131 NIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHA 190
Query: 355 APVRDCCWHPIYPMLISSSWDCNIVRWEI 383
P+R + P +L+++S D I +++
Sbjct: 191 MPIRSLTFSPDSQLLVTASDDGYIKIYDV 219
>MGI|MGI:1917493 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=ISO]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISO] [GO:0035327
"transcriptionally active chromatin" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISO] [GO:0055087
"Ski complex" evidence=ISO] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISO] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1917493 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309554 EMBL:AK012342 EMBL:AK013114
EMBL:AK142498 EMBL:AK153862 EMBL:AK167706 EMBL:BC023026
IPI:IPI00112320 RefSeq:NP_001020546.1 RefSeq:NP_075680.1
UniGene:Mm.28437 ProteinModelPortal:Q9ERF3 SMR:Q9ERF3 IntAct:Q9ERF3
PhosphoSite:Q9ERF3 PaxDb:Q9ERF3 PRIDE:Q9ERF3
Ensembl:ENSMUST00000051822 Ensembl:ENSMUST00000121204 GeneID:66317
KEGG:mmu:66317 InParanoid:Q9ERF3 NextBio:321305 Bgee:Q9ERF3
CleanEx:MM_WDR61 Genevestigator:Q9ERF3
GermOnline:ENSMUSG00000061559 Uniprot:Q9ERF3
Length = 305
Score = 147 (56.8 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 32/128 (25%), Positives = 63/128 (49%)
Query: 132 DFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCF 191
++S D +F I S+ +S DG+ L + D I ++D+ K + H + ++ F
Sbjct: 141 EYSLD-TRGKF-ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTF 198
Query: 192 ADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKD 251
+ ++ L+ + SDD K++D + G L GH + + D +F+S+ D
Sbjct: 199 SPDS-QLLVTASDDGYIKIYD----VQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSD 253
Query: 252 QTTKLWDI 259
++ K+WD+
Sbjct: 254 KSVKVWDV 261
Score = 144 (55.7 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 47/171 (27%), Positives = 74/171 (43%)
Query: 88 ITDTSLSPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSV 147
I + SPD ++L +I I+NI D+ + +H + +G I S+
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGK-------LLH-----TLEGHA--MPIRSL 196
Query: 148 KFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSL 207
FS D Q LV A D +I +YD+Q + + H S V V F + H + S SD S+
Sbjct: 197 TFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSV 256
Query: 208 CKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWD 258
KVWD + H + + + +G +S G DQ ++D
Sbjct: 257 -KVWD----VGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
Score = 140 (54.3 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 43/180 (23%), Positives = 86/180 (47%)
Query: 34 WKVDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKAL-RWTITDTS 92
W ++G V + S+ ++S +++I++++++ N K K I+ + WT+ +
Sbjct: 58 WSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLE-NGKQMKSIDAGPVDAWTL---A 113
Query: 93 LSPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTD 152
SPD ++L + VNI V S +E +S D +F I S+ +S D
Sbjct: 114 FSPDSQYLATGTHMGKVNIFGVESGKKE------------YSLD-TRGKF-ILSIAYSPD 159
Query: 153 GQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWD 212
G+ L + D I ++D+ K + H + ++ F+ ++ L+ + SDD K++D
Sbjct: 160 GKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDS-QLLVTASDDGYIKIYD 218
Score = 117 (46.2 bits), Expect = 0.00030, P = 0.00030
Identities = 44/188 (23%), Positives = 78/188 (41%)
Query: 199 IFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWD 258
+ +GS D L KVW R + L GH G+ +D S+ D +LWD
Sbjct: 35 VVTGSLDDLVKVWKWRD--ERLELQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWD 92
Query: 259 IRKMSSNTTDNSRLRDYDWDYRWMEYPSYARRLKHPHDQSL---ATYKGHSVLRTLIRCY 315
+ + ++ D W + Y H ++ + K L T +
Sbjct: 93 LENGKQMKSIDAGPVDA-WTLAFSPDSQYLATGTHMGKVNIFGVESGKKEYSLDTRGKFI 151
Query: 316 FSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWD 375
S YS KY+ +G+ D + I+D+ +G + L+ H P+R + P +L+++S D
Sbjct: 152 LSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDD 211
Query: 376 CNIVRWEI 383
I +++
Sbjct: 212 GYIKIYDV 219
>UNIPROTKB|Q9GZS3 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=IDA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IDA] [GO:0055087 "Ski complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0035327 "transcriptionally active
chromatin" evidence=IDA] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=IMP] [GO:2001162 "positive
regulation of histone H3-K79 methylation" evidence=IMP] [GO:0080182
"histone H3-K4 trimethylation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 EMBL:CH471136 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309553 EMBL:AF100786 EMBL:AF127799
EMBL:AK024754 EMBL:CR457333 EMBL:BC010080 IPI:IPI00019269
RefSeq:NP_079510.1 UniGene:Hs.513055 PDB:3OW8 PDBsum:3OW8
ProteinModelPortal:Q9GZS3 SMR:Q9GZS3 DIP:DIP-36672N IntAct:Q9GZS3
MINT:MINT-1376321 STRING:Q9GZS3 PhosphoSite:Q9GZS3 DMDM:74761365
PaxDb:Q9GZS3 PeptideAtlas:Q9GZS3 PRIDE:Q9GZS3 DNASU:80349
Ensembl:ENST00000267973 Ensembl:ENST00000558311 GeneID:80349
KEGG:hsa:80349 UCSC:uc002bdn.3 GeneCards:GC15M078575
HGNC:HGNC:30300 HPA:HPA039932 HPA:HPA040065 MIM:609540
neXtProt:NX_Q9GZS3 PharmGKB:PA142670595 InParanoid:Q9GZS3
PhylomeDB:Q9GZS3 ChiTaRS:WDR61 EvolutionaryTrace:Q9GZS3
GenomeRNAi:80349 NextBio:70956 Bgee:Q9GZS3 CleanEx:HS_WDR61
Genevestigator:Q9GZS3 GermOnline:ENSG00000140395 Uniprot:Q9GZS3
Length = 305
Score = 147 (56.8 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 32/128 (25%), Positives = 63/128 (49%)
Query: 132 DFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCF 191
++S D +F I S+ +S DG+ L + D I ++D+ K + H + ++ F
Sbjct: 141 EYSLD-TRGKF-ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTF 198
Query: 192 ADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKD 251
+ ++ L+ + SDD K++D + G L GH + + D +F+S+ D
Sbjct: 199 SPDS-QLLVTASDDGYIKIYD----VQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSD 253
Query: 252 QTTKLWDI 259
++ K+WD+
Sbjct: 254 KSVKVWDV 261
Score = 145 (56.1 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 47/171 (27%), Positives = 74/171 (43%)
Query: 88 ITDTSLSPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSV 147
I + SPD ++L +I I+NI D+ + +H + +G I S+
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGK-------LLH-----TLEGHA--MPIRSL 196
Query: 148 KFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSL 207
FS D Q LV A D +I +YD+Q + + H S V V F + H + S SD S+
Sbjct: 197 TFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSV 256
Query: 208 CKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWD 258
KVWD + H + + + +G +S G DQ ++D
Sbjct: 257 -KVWD----VGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 302
Score = 137 (53.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 43/180 (23%), Positives = 86/180 (47%)
Query: 34 WKVDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKAL-RWTITDTS 92
W ++G V + S+ ++S +++I++++++ N K K I+ + WT+ +
Sbjct: 58 WSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLE-NGKQIKSIDAGPVDAWTL---A 113
Query: 93 LSPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTD 152
SPD ++L + VNI V S +E +S D +F I S+ +S D
Sbjct: 114 FSPDSQYLATGTHVGKVNIFGVESGKKE------------YSLD-TRGKF-ILSIAYSPD 159
Query: 153 GQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWD 212
G+ L + D I ++D+ K + H + ++ F+ ++ L+ + SDD K++D
Sbjct: 160 GKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDS-QLLVTASDDGYIKIYD 218
Score = 118 (46.6 bits), Expect = 0.00024, P = 0.00024
Identities = 45/193 (23%), Positives = 79/193 (40%)
Query: 194 ETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQT 253
E + +GS D L KVW R + L GH G+ +D S+ D
Sbjct: 30 ENSETVVTGSLDDLVKVWKWRD--ERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAH 87
Query: 254 TKLWDIRKMSSNTTDNSRLRDYDWDYRWMEYPSYARRLKHPHDQSL---ATYKGHSVLRT 310
+LWD+ + ++ D W + Y H ++ + K L T
Sbjct: 88 IRLWDLENGKQIKSIDAGPVDA-WTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDT 146
Query: 311 LIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLI 370
+ S YS KY+ +G+ D + I+D+ +G + L+ H P+R + P +L+
Sbjct: 147 RGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLV 206
Query: 371 SSSWDCNIVRWEI 383
++S D I +++
Sbjct: 207 TASDDGYIKIYDV 219
>RGD|1308228 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISO;ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISO;ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISO;ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0055087 "Ski complex" evidence=ISO;ISS]
[GO:0080182 "histone H3-K4 trimethylation" evidence=ISO;ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1308228 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:BC098059 IPI:IPI00366523 RefSeq:NP_001020914.1 UniGene:Rn.3698
ProteinModelPortal:Q4V7A0 STRING:Q4V7A0 PRIDE:Q4V7A0 GeneID:363064
KEGG:rno:363064 UCSC:RGD:1308228 InParanoid:Q4V7A0 NextBio:682300
ArrayExpress:Q4V7A0 Genevestigator:Q4V7A0
GermOnline:ENSRNOG00000012803 Uniprot:Q4V7A0
Length = 305
Score = 147 (56.8 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 32/128 (25%), Positives = 63/128 (49%)
Query: 132 DFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCF 191
++S D +F I S+ +S DG+ L + D I ++D+ K + H + ++ F
Sbjct: 141 EYSLD-TRGKF-ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTF 198
Query: 192 ADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKD 251
+ ++ L+ + SDD K++D + G L GH + + D +F+S+ D
Sbjct: 199 SPDS-QLLVTASDDGYIKIYD----VQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSD 253
Query: 252 QTTKLWDI 259
++ K+WD+
Sbjct: 254 KSVKVWDV 261
Score = 144 (55.7 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 47/171 (27%), Positives = 74/171 (43%)
Query: 88 ITDTSLSPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSV 147
I + SPD ++L +I I+NI D+ + +H + +G I S+
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGK-------LLH-----TLEGHA--MPIRSL 196
Query: 148 KFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSL 207
FS D Q LV A D +I +YD+Q + + H S V V F + H + S SD S+
Sbjct: 197 TFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSV 256
Query: 208 CKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWD 258
KVWD + H + + + +G +S G DQ ++D
Sbjct: 257 -KVWD----VGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
Score = 136 (52.9 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 43/180 (23%), Positives = 85/180 (47%)
Query: 34 WKVDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKAL-RWTITDTS 92
W ++G V + S+ ++S +++I++++++ N K K I+ + WT+ +
Sbjct: 58 WSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLE-NGKQMKSIDAGPVDAWTL---A 113
Query: 93 LSPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTD 152
SPD + L + VNI V S +E +S D +F I S+ +S D
Sbjct: 114 FSPDSQHLATGTHMGKVNIFGVESGKKE------------YSLD-TRGKF-ILSIAYSPD 159
Query: 153 GQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWD 212
G+ L + D I ++D+ K + H + ++ F+ ++ L+ + SDD K++D
Sbjct: 160 GKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDS-QLLVTASDDGYIKIYD 218
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 147 (56.8 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 46/171 (26%), Positives = 77/171 (45%)
Query: 88 ITDTSLSPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSV 147
I + SPD ++L +I I+NI D+ + +H + +G I S+
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGK-------LLH-----TLEGHA--MPIRSL 196
Query: 148 KFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSL 207
FS D Q LV A D +I +Y++Q + + H S V V F+ + H + S SD S+
Sbjct: 197 TFSPDSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSV 256
Query: 208 CKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWD 258
KVWD +S + H + + + ++G +S DQ ++D
Sbjct: 257 -KVWD----VSARTCVHTFLDHQDQVWGVKYNKNGSKIVSVADDQEIHVYD 302
Score = 143 (55.4 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 47/195 (24%), Positives = 82/195 (42%)
Query: 192 ADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKD 251
+++ L+ SGS D L KVW + + L GH G+ +D G S+ D
Sbjct: 28 SNDGSELVISGSLDDLVKVW--KWSDERLELQSTLEGHQLGVVSVDVSPSGNIMASSSLD 85
Query: 252 QTTKLWDIRKMSSNTTDNSRLRDYDWDYRWMEYPSYARRLKHPHDQSL---ATYKGHSVL 308
+LWD+ ++ D W + + H ++ T K L
Sbjct: 86 AHIRLWDLESGKQIRAIDAGPVDA-WSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSL 144
Query: 309 RTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPM 368
T + S YS KY+ +G+ D + I+D+ +G + L+ H P+R + P +
Sbjct: 145 DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQL 204
Query: 369 LISSSWDCNIVRWEI 383
L+++S D I +E+
Sbjct: 205 LVTASDDGYIKIYEV 219
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 38/177 (21%), Positives = 82/177 (46%)
Query: 36 VDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSP 95
++G V + S G+ ++S +++I++++++ +I+ W++ + SP
Sbjct: 60 LEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRAIDAGPVDAWSV---AFSP 116
Query: 96 DQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQE 155
D + L S VNI V + +E +S D +F I S+ +S DG+
Sbjct: 117 DSQHLATGSHVGKVNIFGVETGKKE------------YSLD-TRGKF-ILSIAYSPDGKY 162
Query: 156 LVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWD 212
L + D I ++D+ K + H + ++ F+ ++ L+ + SDD K+++
Sbjct: 163 LASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDS-QLLVTASDDGYIKIYE 218
>FB|FBgn0038927 [details] [associations]
symbol:CG6015 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 KO:K12816 GeneTree:ENSGT00530000063583 EMBL:AY069490
RefSeq:NP_651005.1 UniGene:Dm.20226 SMR:Q9VD52 IntAct:Q9VD52
STRING:Q9VD52 EnsemblMetazoa:FBtr0084183 GeneID:42593
KEGG:dme:Dmel_CG6015 UCSC:CG6015-RA FlyBase:FBgn0038927
InParanoid:Q9VD52 OMA:PEDIEGF OrthoDB:EOG493202 GenomeRNAi:42593
NextBio:829587 Uniprot:Q9VD52
Length = 576
Score = 152 (58.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 56/253 (22%), Positives = 98/253 (38%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETG-HLIFSG 202
I + ++ G ++A D +I ++D + R K D + HL +G
Sbjct: 332 IKDIAWNNRGTNFLSASYDRYIKLWDAETGDVVSRFTTRKMPFCVKFHPDNSKQHLFVAG 391
Query: 203 SDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW----- 257
+ D WD R + L G + ITF+D D R F++ D++ ++W
Sbjct: 392 TSDKKIICWDTRSGDIVQEYDRHL-GSVSTITFVD---DNRRFVTTSDDKSMRIWEWDIP 447
Query: 258 -DIRKMSSNTTDNSRLRDYDWDYRWMEYPSYARR------LKHPHDQSLATYKGHSVLRT 310
D++ ++ T + + +WM S + L T+ GH V
Sbjct: 448 VDMKYIADPTMHSMPAVTLAPNGKWMACQSLDNKIVIFSALNRFKMNRKKTFTGHMVSGY 507
Query: 311 LIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPM-L 369
+ FSP+ S Y+ +G D YI+D + K H+ WHP +
Sbjct: 508 ACQLDFSPDMS----YLVSGDGDGKCYIWDWKTTKMYKKWQAHDGVCISALWHPHEASKV 563
Query: 370 ISSSWDCNIVRWE 382
+++ WD I W+
Sbjct: 564 VTAGWDGQIKYWD 576
>UNIPROTKB|E1C9D6 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:AADN02061119 IPI:IPI00578429 RefSeq:XP_425517.3
ProteinModelPortal:E1C9D6 PRIDE:E1C9D6 Ensembl:ENSGALT00000023410
GeneID:427945 KEGG:gga:427945 Uniprot:E1C9D6
Length = 340
Score = 148 (57.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 58/251 (23%), Positives = 100/251 (39%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQAN----KCSLRIPAHKSDVNTVCFADETGHLI 199
+ + ++ G + G DN +Y+L+ K S + AH ++ F D+ I
Sbjct: 100 VMTCAYAPSGNFVACGGLDNMCSIYNLKTREGNVKVSRELSAHTGYLSCCRFLDDNS--I 157
Query: 200 FSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI 259
+ S D+ C +WD I G+ V +GH + D + FIS D T KLWD+
Sbjct: 158 VTSSGDTTCALWD----IETGQQKTVFLGHTGDCMSLAVSPDFKLFISGACDATAKLWDV 213
Query: 260 RKMSSNTTDNSRLRDYDWDYRWMEYPSYA--------RRLKHPHDQSLATYKGHSVLRTL 311
R+ + T + D + + + R DQ L Y S++ +
Sbjct: 214 REGTCRQTFSGHESDINAICFFPNGEAICTGSDDATCRLFDLRADQELIVYSHESIICGI 273
Query: 312 IRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLIS 371
S +S + + + G D + I+D + +V L H+ V C M ++
Sbjct: 274 T----SVAFSRSGRLLLAGYDDFNCNIWDSLKAERVGILSGHDNRV-SCLGVTADGMAVA 328
Query: 372 S-SWDCNIVRW 381
+ SWD + W
Sbjct: 329 TGSWDSFLKIW 339
Score = 117 (46.2 bits), Expect = 0.00038, P = 0.00038
Identities = 31/121 (25%), Positives = 58/121 (47%)
Query: 141 EFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKS---DVNTVCFADETGH 197
E I ++ F +G+ + D ++DL+A++ L + +H+S + +V F+ +G
Sbjct: 226 ESDINAICFFPNGEAICTGSDDATCRLFDLRADQ-ELIVYSHESIICGITSVAFS-RSGR 283
Query: 198 LIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
L+ +G DD C +WD K G+L GH ++ + DG + D K+W
Sbjct: 284 LLLAGYDDFNCNIWDSL----KAERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKIW 339
Query: 258 D 258
+
Sbjct: 340 N 340
Score = 117 (46.2 bits), Expect = 0.00038, P = 0.00038
Identities = 36/126 (28%), Positives = 57/126 (45%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
I+++ +STD + LV+A D + V+D IP S V T +A +G+ + G
Sbjct: 58 IYAMHWSTDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAP-SGNFVACGG 116
Query: 204 DDSLCKVWD---RRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
D++C +++ R + R G+L F+D D S+G D T LWDI
Sbjct: 117 LDNMCSIYNLKTREGNVKVSRELSAHTGYLSCCRFLD---DNSIVTSSG-DTTCALWDIE 172
Query: 261 KMSSNT 266
T
Sbjct: 173 TGQQKT 178
>UNIPROTKB|E1BWK2 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031648 "protein destabilization"
evidence=IEA] [GO:0042347 "negative regulation of NF-kappaB import
into nucleus" evidence=IEA] [GO:0042753 "positive regulation of
circadian rhythm" evidence=IEA] [GO:0045862 "positive regulation of
proteolysis" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 GeneTree:ENSGT00690000101849 OMA:FDQWSEA
EMBL:AADN02035964 EMBL:AADN02035965 EMBL:AADN02035966
IPI:IPI00818493 Ensembl:ENSGALT00000041199 ArrayExpress:E1BWK2
Uniprot:E1BWK2
Length = 523
Score = 151 (58.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 54/254 (21%), Positives = 116/254 (45%)
Query: 139 EDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHL 198
E+ G++ +++ D +++++ DN I ++D + +C + H V +C + +
Sbjct: 218 ENSKGVYCLQY--DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LCLQYDERVI 273
Query: 199 IFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWD 258
+ SD ++ +VWD ++ G L+ H E + + R ++ KD++ +WD
Sbjct: 274 VTGSSDSTVSRVWD----VNTGEVLNTLIHHNEAVLHL--RFSNGLMVTCSKDRSIAVWD 327
Query: 259 IRKMSSNTT------DNSRLRDYDWDYRWMEYPSYARRLKHPHDQS---LATYKGHSVLR 309
+ + T + + D+D +++ S R +K + + T GH +
Sbjct: 328 MASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGH---K 384
Query: 310 TLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPML 369
I C +Y + + +GSSDN++ ++D+ GA + L+ H VR C +
Sbjct: 385 RGIACL---QYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR--CIRFDNKRI 437
Query: 370 ISSSWDCNIVRWEI 383
+S ++D I W++
Sbjct: 438 VSGAYDGKIKVWDL 451
>FB|FBgn0039601 [details] [associations]
symbol:CG1523 species:7227 "Drosophila melanogaster"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GeneTree:ENSGT00390000012666 KO:K11802 EMBL:AY051986
RefSeq:NP_651635.2 ProteinModelPortal:Q9VAT2 SMR:Q9VAT2
IntAct:Q9VAT2 MINT:MINT-1763791 PaxDb:Q9VAT2 PRIDE:Q9VAT2
EnsemblMetazoa:FBtr0085355 GeneID:43400 KEGG:dme:Dmel_CG1523
UCSC:CG1523-RA FlyBase:FBgn0039601 InParanoid:Q9VAT2 OMA:DGSIFTW
OrthoDB:EOG4H9W1P GenomeRNAi:43400 NextBio:833737 Bgee:Q9VAT2
Uniprot:Q9VAT2
Length = 621
Score = 152 (58.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 41/130 (31%), Positives = 62/130 (47%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIP-AHKSDVNTVCFADETGHLIFSG 202
IF+++F+ DG +VAA + V+D K ++P AH VN + F DE L +G
Sbjct: 51 IFNLEFNADGNVVVAATERKCVLVFDAITQKEIFKVPDAHTDSVNCIKFFDE--RLFATG 108
Query: 203 SDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKM 262
SDD +WD R K R VL GH + I+ + +S+G D + WDI
Sbjct: 109 SDDFTVALWDLRNMKQKLR---VLHGHSNWVKNIEYSSKDKLLVSSGFDGSIFTWDINSQ 165
Query: 263 SSNTTDNSRL 272
+ + R+
Sbjct: 166 TEQGLISQRV 175
>UNIPROTKB|Q9BRX9 [details] [associations]
symbol:WDR83 "WD repeat domain-containing protein 83"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;IDA] [GO:0000375 "RNA
splicing, via transesterification reactions" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH471106 GO:GO:0000398 GO:GO:0071013 UniGene:Hs.657204
HOGENOM:HOG000091642 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V OMA:CKQGAVR EMBL:AK223195 EMBL:AK314164
EMBL:BC005870 IPI:IPI00031581 RefSeq:NP_001093207.1
RefSeq:NP_115708.1 ProteinModelPortal:Q9BRX9 SMR:Q9BRX9
STRING:Q9BRX9 PhosphoSite:Q9BRX9 DMDM:74761224 PRIDE:Q9BRX9
DNASU:84292 Ensembl:ENST00000242796 Ensembl:ENST00000418543
GeneID:84292 KEGG:hsa:84292 UCSC:uc002mue.4 GeneCards:GC19P012777
HGNC:HGNC:32672 HPA:HPA042629 HPA:HPA042838 neXtProt:NX_Q9BRX9
PharmGKB:PA165394765 InParanoid:Q9BRX9 PhylomeDB:Q9BRX9
ChiTaRS:WDR83 GenomeRNAi:84292 NextBio:73931 ArrayExpress:Q9BRX9
Bgee:Q9BRX9 Genevestigator:Q9BRX9 GermOnline:ENSG00000123154
Uniprot:Q9BRX9
Length = 315
Score = 147 (56.8 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 57/230 (24%), Positives = 93/230 (40%)
Query: 150 STDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCK 209
S D L + G D + ++D+ + + + H VNTV F +E +I SGS DS +
Sbjct: 76 SFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEAT-VILSGSIDSSIR 134
Query: 210 VWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRK-------M 262
WD C + L +G++ + + ++ D + +D+R +
Sbjct: 135 CWD--CRSRRPEPVQTLDEARDGVSSV--KVSDHEILAGSVDGRVRRYDLRMGQLFSDYV 190
Query: 263 SSNTTDNSRLRDYDWDYRWMEYPSYARRLKHPHDQSLATYKGHSVLRTLIRCYFSPEYST 322
S T RD S R L + L YKGH + C S E T
Sbjct: 191 GSPITCTCFSRDGQCTLV-SSLDSTLRLLDKDTGELLGEYKGHKNQEYKLDCCLS-ERDT 248
Query: 323 AQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISS 372
++ + S D V+ +DLV GA L + V+ +HP P L+++
Sbjct: 249 ---HVVSCSEDGKVFFWDLVEGALALALPVGSGVVQSLAYHPTEPCLLTA 295
Score = 38 (18.4 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 5/22 (22%), Positives = 14/22 (63%)
Query: 47 QFSNDGSFFVAASQESNIKVYN 68
+F+ DG++ + + +K++N
Sbjct: 32 RFNVDGNYCLTCGSDKTLKLWN 53
>UNIPROTKB|B3KPW7 [details] [associations]
symbol:ERCC8 "DNA excision repair protein ERCC-8"
species:9606 "Homo sapiens" [GO:0009411 "response to UV"
evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009411 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010165
HOVERGEN:HBG005409 UniGene:Hs.435237 HGNC:HGNC:3439 EMBL:AC022445
EMBL:AC104113 EMBL:AK056931 IPI:IPI01015409 SMR:B3KPW7
STRING:B3KPW7 Ensembl:ENST00000426742 Uniprot:B3KPW7
Length = 338
Score = 98 (39.6 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 35/130 (26%), Positives = 60/130 (46%)
Query: 156 LVAAGSDN-FIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWD-R 213
LVA G+ + + DL++ CS + H+ ++ V ++ +++ + S DS K+WD R
Sbjct: 100 LVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVR 159
Query: 214 R---CFIS----KGR-------ANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI 259
R C I+ G+ AN G + G+ F DG + ++ G D +LW+
Sbjct: 160 RASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS---DGLHLLTVGTDNRMRLWNS 216
Query: 260 RKMSSNTTDN 269
NT N
Sbjct: 217 SN-GENTLVN 225
Score = 94 (38.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 334 NSVYIYDLVSGAQVAKLDFHNAPVRDCC-WHPIYPMLISSSWDCNIVRWEIPGIGEAPLP 392
+++ +Y + SG Q+ L H V DCC + + L S S DCNI+ W +P + E P+P
Sbjct: 256 STIAVYTVYSGEQITMLKGHYKTV-DCCVFQSNFQELYSGSRDCNILAW-VPSLYE-PVP 312
Score = 62 (26.9 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 22/71 (30%), Positives = 33/71 (46%)
Query: 156 LVAAGSDNFIYVYDLQANK----------CSL---RIPAHKSDVNTV-CFADETGHLIFS 201
+++ GSD I +YDL+ + CS+ H+ V TV + +TG + S
Sbjct: 1 MLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTG-MFTS 59
Query: 202 GSDDSLCKVWD 212
S D KVWD
Sbjct: 60 SSFDKTLKVWD 70
>DICTYBASE|DDB_G0291231 [details] [associations]
symbol:mhkA "myosin heavy chain kinase A"
species:44689 "Dictyostelium discoideum" [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0006468 "protein phosphorylation"
evidence=IEA;IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0004672 "protein kinase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0018107 "peptidyl-threonine
phosphorylation" evidence=IDA] [GO:0051764 "actin crosslink
formation" evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=IDA] [GO:0051017 "actin filament bundle assembly"
evidence=IDA] [GO:0051015 "actin filament binding" evidence=IDA]
[GO:0005938 "cell cortex" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0031037 "myosin II filament disassembly"
evidence=IDA;IMP] [GO:0000910 "cytokinesis" evidence=IMP]
[GO:0045159 "myosin II binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA;IC] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA;IDA] [GO:0016905 "myosin heavy chain
kinase activity" evidence=IEA;IDA] [GO:0046777 "protein
autophosphorylation" evidence=IDA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR004166
InterPro:IPR011009 InterPro:IPR015943 Pfam:PF00400 Pfam:PF02816
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS51158 SMART:SM00320
SMART:SM00811 dictyBase:DDB_G0291231 GO:GO:0005524 GO:GO:0005938
EMBL:AAFI02000177 GenomeReviews:CM000155_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 SUPFAM:SSF56112
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0051015 GO:GO:0046777 GO:GO:0016887 GO:GO:0051017
GO:GO:0000910 GO:GO:0051764 GO:GO:0018107 BRENDA:2.7.11.7
GO:GO:0031037 EMBL:U16856 PIR:A55532 RefSeq:XP_635119.1 PDB:3LKM
PDB:3LLA PDB:3LMH PDB:3LMI PDB:3PDT PDBsum:3LKM PDBsum:3LLA
PDBsum:3LMH PDBsum:3LMI PDBsum:3PDT ProteinModelPortal:P42527
EnsemblProtists:DDB0216274 GeneID:8628066 KEGG:ddi:DDB_G0291231
OMA:NEQVERV ProtClustDB:CLSZ2429540 EvolutionaryTrace:P42527
GO:GO:0016905 Uniprot:P42527
Length = 1146
Score = 148 (57.2 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 61/231 (26%), Positives = 99/231 (42%)
Query: 156 LVAAGSDNFIYVYDLQAN--KCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDR 213
+ + DN I V+ +++ KC + H +VN V A+E +FS S D KVWD
Sbjct: 925 IFTSSPDNTIKVHIIRSGNTKCIETLVGHTGEVNCVV-ANEK--YLFSCSYDKTIKVWDL 981
Query: 214 RCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSSNTTDNSRLR 273
F GV +++ + GRY S G DQ +WD +S N +
Sbjct: 982 STFKEIKSFEGVHTKYIKTLAL-----SGRYLFSGGNDQIIYVWDTETLSM--LFNMQGH 1034
Query: 274 DYDWDYRWMEYPSYARRLKHPHDQSLATYKGHSVLRTLIRCYFSPEYSTAQ-KYIYTGSS 332
+ DW SY + + S + TL + S + +Y+Y+GS
Sbjct: 1035 E-DWVLSLHCTASYLFSTSKDNVIKIWDLSNFSCIDTLKGHWNSVSSCVVKDRYLYSGSE 1093
Query: 333 DNSVYIYDLVSGAQVAKLD-FHNAPVRDCCWHPIYPMLISSSWDCNIVRWE 382
DNS+ ++DL + V + H+ V+ C +IS+++D +I WE
Sbjct: 1094 DNSIKVWDLDTLECVYTIPKSHSLGVK--CLMVFNNQIISAAFDGSIKVWE 1142
Score = 54 (24.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 19/74 (25%), Positives = 31/74 (41%)
Query: 36 VDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKI-------QKDIETKALRWTI 88
+ RV + F ++ A + +V++V+ NWK +K IE+ A
Sbjct: 865 IQSFRERVNSIAFFDNQKLLCAGYGDGTYRVFDVNDNWKCLYTVNGHRKSIESIACNSNY 924
Query: 89 TDTSLSPDQRFLVY 102
TS SPD V+
Sbjct: 925 IFTS-SPDNTIKVH 937
>TAIR|locus:2174784 [details] [associations]
symbol:FAS2 "AT5G64630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006334 "nucleosome assembly" evidence=IDA]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0033186 "CAF-1 complex" evidence=IPI] [GO:0031507
"heterochromatin assembly" evidence=IMP] [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0010026 "trichome differentiation"
evidence=IMP] [GO:0048366 "leaf development" evidence=IMP]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IMP] [GO:0006310 "DNA recombination"
evidence=IMP] [GO:0009555 "pollen development" evidence=IGI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002688 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0009555 GO:GO:0008283
GO:GO:0006351 GO:GO:0000724 GO:GO:0048366 GO:GO:0009933
GO:GO:0006334 GO:GO:0005678 GO:GO:0031507 EMBL:AB010076
HOGENOM:HOG000183312 KO:K10751 OMA:VYDICWT GO:GO:0010026
EMBL:AB027230 EMBL:AF375435 EMBL:AY074827 IPI:IPI00534662
RefSeq:NP_568990.1 RefSeq:NP_974991.1 UniGene:At.28741
ProteinModelPortal:Q9SXY1 SMR:Q9SXY1 STRING:Q9SXY1 PRIDE:Q9SXY1
EnsemblPlants:AT5G64630.2 GeneID:836584 KEGG:ath:AT5G64630
GeneFarm:3331 TAIR:At5g64630 InParanoid:Q9SXY1 PhylomeDB:Q9SXY1
ProtClustDB:CLSN2690078 Genevestigator:Q9SXY1 Uniprot:Q9SXY1
Length = 487
Score = 103 (41.3 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 32/119 (26%), Positives = 62/119 (52%)
Query: 146 SVKFSTDGQELVAAGSDN---FIY-VYDLQAN---KCSLRIPAHKSDVNTVCFADETGHL 198
+++FS G EL+A+G+D FI+ ++ + N K + H+ DV + ++ + +L
Sbjct: 69 TIRFSPSG-ELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYL 127
Query: 199 IFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
I SGS D+ C +WD ++KG + +L H + + +Y S D+T +++
Sbjct: 128 I-SGSVDNSCIIWD----VNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIY 181
Score = 93 (37.8 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 25/68 (36%), Positives = 35/68 (51%)
Query: 325 KYIYTGSSDNSVYIYDLVSGAQVAKL-DFHNAPVRDCCWHPIYPMLISSSWD--CNIVRW 381
+ ++ ++ NSVYIYD A +A L H A + D W P L SS D C +V +
Sbjct: 311 RLVFAIATLNSVYIYDTECVAPIAVLAGLHYAAITDITWSPNASYLALSSQDGYCTLVEF 370
Query: 382 EIPGIGEA 389
E +GEA
Sbjct: 371 EDKELGEA 378
Score = 84 (34.6 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 30/131 (22%), Positives = 56/131 (42%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPA---------HKSDVNTVCFADE 194
+ +V F L AG+D I ++ + + + ++P+ H VNT+ F+
Sbjct: 16 VLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIRFSP- 74
Query: 195 TGHLIFSGSDDSLCKVWDRRCFISKG--RANGVLMGHLEGITFIDSRRDGRYFISNGKDQ 252
+G L+ SG+D +W + + + L H + + + D Y IS D
Sbjct: 75 SGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDN 134
Query: 253 TTKLWDIRKMS 263
+ +WD+ K S
Sbjct: 135 SCIIWDVNKGS 145
>ZFIN|ZDB-GENE-040426-1110 [details] [associations]
symbol:strap "serine/threonine kinase receptor
associated protein" species:7955 "Danio rerio" [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1110 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016301 HSSP:P16649
GeneTree:ENSGT00630000089849 EMBL:BX649476 CTD:11171
HOGENOM:HOG000174258 HOVERGEN:HBG055228 KO:K13137 OMA:LWQTTVG
OrthoDB:EOG4CRM0M EMBL:BC049525 EMBL:BC065428 IPI:IPI00506790
RefSeq:NP_956598.1 UniGene:Dr.12320 STRING:Q7ZW92 DNASU:393274
Ensembl:ENSDART00000013224 Ensembl:ENSDART00000124627 GeneID:393274
KEGG:dre:393274 InParanoid:Q7ZW92 NextBio:20814331 Uniprot:Q7ZW92
Length = 329
Score = 147 (56.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 56/246 (22%), Positives = 104/246 (42%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
++ +T+ + A +D V+D L + AHK V +V F ++ +L+ +G
Sbjct: 62 VWGATLNTEATKAATAAADFTAKVWDAVTGDEVLTL-AHKHIVKSVNFTQDSNYLL-TGG 119
Query: 204 DDSLCKVWDRRCFISKGRANGV-LMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKM 262
+D + +++D +SK A + GH I + + +S D+T +LWD
Sbjct: 120 NDKVLRIYD----LSKPEAEPQEIAGHTSAIKKALWCNNDQQILSAADDKTIRLWD---- 171
Query: 263 SSNTTDNSRLRDYDWDYRWMEYPSYARRLKHPHDQSLATYKGHSVLRTLIRCYFSPE--Y 320
NT + + +D MEY L + +++A Y HS+ LI+ +P +
Sbjct: 172 -KNTNEAVKTLSFDASVSSMEYIPDGETLVITYGRTIAFYNAHSL--DLIKTVDAPASIH 228
Query: 321 STA----QKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDC 376
S + + + G D +Y YD + ++ H PV + P + S S D
Sbjct: 229 SASLHPDKDFFVAGGDDFKLYKYDYTTKEEMESYKGHFGPVHCVRFSPDGELYASGSEDG 288
Query: 377 NIVRWE 382
+ W+
Sbjct: 289 TLRLWQ 294
>UNIPROTKB|B4MY77 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7260 "Drosophila willistoni"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 OMA:SWKCVCT OrthoDB:EOG45DV4X EMBL:CH963894
RefSeq:XP_002066080.1 ProteinModelPortal:B4MY77 STRING:B4MY77
EnsemblMetazoa:FBtr0252775 GeneID:6643305 KEGG:dwi:Dwil_GK22124
FlyBase:FBgn0224109 InParanoid:B4MY77 Uniprot:B4MY77
Length = 335
Score = 147 (56.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 53/226 (23%), Positives = 95/226 (42%)
Query: 36 VDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKN-WKIQKDIETKALRWTITDTSLS 94
+ G R++ + G+ F + ++ I+++++ N W K I + + TI + S
Sbjct: 10 LQGHKGRIWGVAWHPKGNTFASCGEDKAIRIWSLSGNSWST-KTILSDGHKRTIREIRWS 68
Query: 95 PDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQ 154
P ++L AS A I S E N T+ +G E+E + SV +S G
Sbjct: 69 PCGQYLASASFDATTAIWSKSSGEFE--CNATL--------EGHENE--VKSVSWSKSGG 116
Query: 155 ELVAAGSDNFIYVYDLQAN---KCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVW 211
L D ++++++ + +C+ + H DV V + T ++ S S D+ K++
Sbjct: 117 LLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVW-HPTKEILASASYDNTIKMF 175
Query: 212 DRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
S L H + ID DG +S D T K+W
Sbjct: 176 AESALDSDWDCTATLSSHTSTVWSIDFDADGERLVSCSDDTTLKIW 221
>UNIPROTKB|B4P7Q3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7245 "Drosophila yakuba"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000158 OrthoDB:EOG45DV4X RefSeq:XP_002091367.1
ProteinModelPortal:B4P7Q3 STRING:B4P7Q3 EnsemblMetazoa:FBtr0258798
GeneID:6530451 KEGG:dya:Dyak_GE12280 FlyBase:FBgn0230036
Uniprot:B4P7Q3
Length = 335
Score = 147 (56.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 52/225 (23%), Positives = 95/225 (42%)
Query: 36 VDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSP 95
+ G R++ + G+ F + ++ I+++++ N K I + + TI + SP
Sbjct: 10 LQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIQWSP 69
Query: 96 DQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQE 155
++L AS A I S E N T+ +G E+E + SV +S G
Sbjct: 70 CGQYLASASFDATTAIWSKSSGEFE--CNATL--------EGHENE--VKSVSWSRSGGL 117
Query: 156 LVAAGSDNFIYVYDLQAN---KCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWD 212
L D ++++++ + +C+ + +H DV V + T ++ S S D+ K++
Sbjct: 118 LATCSRDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVW-HPTKEILASASYDNTIKMYA 176
Query: 213 RRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
+ L H I ID DG +S D T K+W
Sbjct: 177 EEPIDNDWDCTATLTSHTSTIWGIDFDADGERLVSCSDDTTVKIW 221
>ZFIN|ZDB-GENE-040924-7 [details] [associations]
symbol:wdr55 "WD repeat domain 55" species:7955
"Danio rerio" [GO:0048538 "thymus development" evidence=IMP]
[GO:0060465 "pharynx development" evidence=IMP] [GO:0001654 "eye
development" evidence=IMP] [GO:0048794 "swim bladder development"
evidence=IMP] [GO:0005730 "nucleolus" evidence=ISS] [GO:0006364
"rRNA processing" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040924-7 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0048538 GO:GO:0060465
GO:GO:0001654 GO:GO:0006364 CTD:54853 HOGENOM:HOG000242496
OrthoDB:EOG41C6WQ InterPro:IPR017422 PIRSF:PIRSF038169
EMBL:AY648800 EMBL:BC095552 IPI:IPI00499087 RefSeq:NP_001003871.1
UniGene:Dr.99528 ProteinModelPortal:Q6DRF9 STRING:Q6DRF9
DNASU:445394 GeneID:445394 KEGG:dre:445394 InParanoid:Q6DRF9
NextBio:20832099 GO:GO:0048794 Uniprot:Q6DRF9
Length = 387
Score = 148 (57.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 38/116 (32%), Positives = 63/116 (54%)
Query: 147 VKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIP-AHKSDVNTVCFADETGHLIFSGSDD 205
V FS+DGQ+L + D I++ D++A K RIP AHK +N + DE ++ +G D+
Sbjct: 87 VLFSSDGQKLFSVSKDKAIHIMDVEAGKLETRIPKAHKVPINAMLLIDE--NIFATGDDE 144
Query: 206 SLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRK 261
KVWD R KG + L H + I+ I + R +++ D T +++I++
Sbjct: 145 GTLKVWDMR----KGTSFMDLKHHEDYISDITIDQAKRTLLTSSGDGTLGVFNIKR 196
>FB|FBgn0032030 [details] [associations]
symbol:Wdr82 species:7227 "Drosophila melanogaster"
[GO:0008352 "katanin complex" evidence=ISS] [GO:0051013
"microtubule severing" evidence=ISS] [GO:0048188 "Set1C/COMPASS
complex" evidence=IDA] [GO:0051568 "histone H3-K4 methylation"
evidence=IMP;IDA] [GO:0080182 "histone H3-K4 trimethylation"
evidence=IMP] [GO:0035097 "histone methyltransferase complex"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048188 GO:GO:0080182
HSSP:P16649 KO:K14962 GeneTree:ENSGT00530000063965 OMA:CTNMAFW
EMBL:AY069081 RefSeq:NP_609217.1 UniGene:Dm.6967 SMR:Q9VLN1
IntAct:Q9VLN1 MINT:MINT-1570298 STRING:Q9VLN1
EnsemblMetazoa:FBtr0079650 GeneID:34153 KEGG:dme:Dmel_CG17293
UCSC:CG17293-RA FlyBase:FBgn0032030 InParanoid:Q9VLN1
OrthoDB:EOG4C5B12 GenomeRNAi:34153 NextBio:787125 Uniprot:Q9VLN1
Length = 317
Score = 142 (55.0 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 65/285 (22%), Positives = 122/285 (42%)
Query: 114 VGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGS--DNFIYVYDLQ 171
+ S + + KG S + ++G+ + F+ + + + D+ I L
Sbjct: 39 ISCSEDDQIVIYDCEKGTQ-SRTVNSKKYGVDLIHFTHANNTAIHSSTKVDDTIRYLSLH 97
Query: 172 ANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLE 231
NK P H V ++C + + SGS D ++WD R +G LM HL
Sbjct: 98 DNKYLRYFPGHTKKVISLCISPVEDTFL-SGSLDKTLRLWDLRSPNCQG-----LM-HLS 150
Query: 232 GITFIDSRRDGRYFISNGKDQTTKLWDIRKMSSNTTDNSRL-RDYDWDYRWMEYP----- 285
G +G F + ++ KL+D+R +L ++ + D+ +++
Sbjct: 151 GRPIAAYDPEGLIFAAGVNSESIKLYDLRSFDKGPFVTFKLNQEKECDWTGLKFSRDGKT 210
Query: 286 -------SYARRLKHPHDQSLATYKGHSVLRTL-IRCYFSPEYSTAQKYIYTGSSDNSVY 337
S R + H L T+ G+ + + I FSP+ ++I++GS+D V+
Sbjct: 211 ILISTNGSVIRLVDAFHGTPLQTFTGYPNNKGIPIEASFSPD----SQFIFSGSTDGRVH 266
Query: 338 IYDLVSGAQVAKLDF-HNAPVRDCCWHPIYPMLISSSWDCNIVRW 381
I++ +G +V+ L+ H PV+ ++P Y ML S+ N+ W
Sbjct: 267 IWNADTGNKVSVLNGDHPGPVQCVQFNPKYMMLASAC--TNMAFW 309
Score = 43 (20.2 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 6/30 (20%), Positives = 17/30 (56%)
Query: 42 RVYTSQFSNDGSFFVAASQESNIKVYNVDK 71
++ F+ +G ++ S++ I +Y+ +K
Sbjct: 25 KINAIDFAPNGEHLISCSEDDQIVIYDCEK 54
>UNIPROTKB|E2RRL3 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 CTD:84292 KO:K13124
OMA:CKQGAVR EMBL:AAEX03012407 RefSeq:XP_542047.1
ProteinModelPortal:E2RRL3 Ensembl:ENSCAFT00000027316 GeneID:484931
KEGG:cfa:484931 NextBio:20858998 Uniprot:E2RRL3
Length = 315
Score = 145 (56.1 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 59/230 (25%), Positives = 91/230 (39%)
Query: 150 STDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCK 209
S D L + G D + ++D+ + + + H VNTV F +E +I SGS DS +
Sbjct: 76 SFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEAT-VILSGSIDSSIR 134
Query: 210 VWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRK-------M 262
WD C + L +GI+ + + +S D + +D+R +
Sbjct: 135 CWD--CRSRRPEPVQTLDEARDGISSV--KVSDHEVLSGSVDGRVRRYDLRMGQLFSDYV 190
Query: 263 SSNTTDNSRLRDYDWDYRWMEYPSYARRLKHPHDQSLATYKGHSVLRTLIRCYFSPEYST 322
S T RD S R L + L Y GH + C S E T
Sbjct: 191 GSPITCTCFSRDGQCTLV-SSLDSTLRLLDKDTGELLGEYTGHKNQEYKLDCCLS-ERDT 248
Query: 323 AQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISS 372
++ + S D VY +DLV GA L V+ +HP P L+++
Sbjct: 249 ---HVVSCSEDGKVYFWDLVEGALALALPVGPGVVQSLAYHPTEPCLLTA 295
Score = 39 (18.8 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 9/41 (21%), Positives = 19/41 (46%)
Query: 28 LPVNGPWKVDGMNSRVYTSQFSNDGSFFVAASQESNIKVYN 68
LP +D V +F+ DG++ + + +K++N
Sbjct: 13 LPQKRVKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWN 53
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 150 (57.9 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 68/266 (25%), Positives = 102/266 (38%)
Query: 15 FSAADSCHVLSRYLPVNGPWKVDGMNSRVYTSQFSNDGSFFVAASQESN-IKVYNVDKNW 73
FS D C + WK DG + + D VA + + DK W
Sbjct: 306 FSPVDDCLATASADRTAKLWKTDGTLLQTFEGHL--DRLARVAFHPSGKYLGTTSYDKTW 363
Query: 74 KIQKDIETKALRWTITDTSLSPDQRFLVYASICAIVNIVDVGSSARESLANV-TIHKGLD 132
++ DI T A + L VY I + S +SLA V + G
Sbjct: 364 RLW-DINTGA------ELLLQEGHSRSVYG-IAFQQDGALAASCGLDSLARVWDLRTGRS 415
Query: 133 FSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFA 192
+ +FSV FS +G L + G DN ++DL+ K IPAH + V+ V +
Sbjct: 416 ILVFQGHIK-PVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYE 474
Query: 193 DETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQ 252
+ G+ + + S D +W R F S ++ L GH + +D D + D+
Sbjct: 475 PQEGYFLATASYDMKVNIWSGRDF-SLVKS---LAGHESKVASLDITADSSCIATVSHDR 530
Query: 253 TTKLWDIRKMSSNTTDNSRLRDYDWD 278
T KLW S N ++ D D
Sbjct: 531 TIKLWT---SSGNDDEDEEKETMDID 553
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 151 (58.2 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 71/283 (25%), Positives = 125/283 (44%)
Query: 115 GSSARESLANVTIHKGLDFSADG--DEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQA 172
GSS+ E T+ GL F+ + + + S+ +S + ++ + +G D+ Y Q
Sbjct: 143 GSSSGE----FTLWNGLTFNFETILQAHDSAVRSIIWSHN-EDWMVSGDDSGNIKY-WQP 196
Query: 173 NKCSLRI-PAHK-SDVNTVCFADETGHLIFSGSDDSLCKVWD-RRCFISKGRANGVLMGH 229
N +++I AH+ S + + F+ T + S +DD + K+WD RC + L+GH
Sbjct: 197 NMNNVKIFKAHEQSKIRGLSFSP-TDLKLASCADDKIIKIWDFARC-----TEDNQLVGH 250
Query: 230 LEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSSNTT---DNSRLRDYDWDYR--WMEY 284
+ + +S GKD K+WD + + TT S + +W+ W+
Sbjct: 251 GWDVKCVSWHPQKSLIVSGGKDNNIKIWDAKSSQNITTLHGHKSTVSKVEWNQNGNWIVS 310
Query: 285 PSYARRLKHPHD----QSLATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYD 340
S + LK D + + T+KGH T + + P + + +G D + +Y
Sbjct: 311 ASSDQLLK-VFDIRTMKEMQTFKGHGKEVTALALH--PYH---EDLFVSGDKDGKI-LYW 363
Query: 341 LVSGAQV-AKL-DFHNAPVRDCCWHPIYPMLISSSWDCNIVRW 381
+V + A++ H+A V WHPI +L S S D W
Sbjct: 364 IVGNPEPQAEIHSAHDADVWSLSWHPIGHILASGSNDHTTKFW 406
>UNIPROTKB|B4GDM7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7234 "Drosophila persimilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH479181 OrthoDB:EOG45DV4X RefSeq:XP_002015794.1
ProteinModelPortal:B4GDM7 GeneID:6591258 KEGG:dpe:Dper_GL10827
FlyBase:FBgn0148437 Uniprot:B4GDM7
Length = 335
Score = 146 (56.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 53/225 (23%), Positives = 96/225 (42%)
Query: 36 VDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSP 95
+ G R++ + G+ F + ++ I+V+++ N K I + + TI + SP
Sbjct: 10 LQGHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLSGNTWSTKTILSDGHKRTIREIRWSP 69
Query: 96 DQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQE 155
++L AS A I S E N T+ +G E+E + SV +S G
Sbjct: 70 CGQYLASASFDATTAIWSKSSGEFE--CNATL--------EGHENE--VKSVSWSRSGGL 117
Query: 156 LVAAGSDNFIYVYDLQAN---KCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWD 212
L D ++++++ + +C+ + AH DV V + T ++ S S D+ K++
Sbjct: 118 LATCSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVW-HPTKDILASASYDNTIKMFA 176
Query: 213 RRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
S L H + ID +G +S D+T K+W
Sbjct: 177 ESQLDSDWDCTATLSSHTSTVWSIDFDAEGDRLVSCSDDKTLKIW 221
>UNIPROTKB|Q292E8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:46245 "Drosophila pseudoobscura
pseudoobscura" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000071 GenomeReviews:CM000071_GR OMA:SWKCVCT
OrthoDB:EOG45DV4X HSSP:P63005 RefSeq:XP_001360339.1
ProteinModelPortal:Q292E8 GeneID:4803656 KEGG:dpo:Dpse_GA11817
FlyBase:FBgn0071866 InParanoid:Q292E8 Uniprot:Q292E8
Length = 335
Score = 146 (56.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 53/225 (23%), Positives = 96/225 (42%)
Query: 36 VDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSP 95
+ G R++ + G+ F + ++ I+V+++ N K I + + TI + SP
Sbjct: 10 LQGHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLSGNTWSTKTILSDGHKRTIREIRWSP 69
Query: 96 DQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQE 155
++L AS A I S E N T+ +G E+E + SV +S G
Sbjct: 70 CGQYLASASFDATTAIWSKSSGEFE--CNATL--------EGHENE--VKSVSWSRSGGL 117
Query: 156 LVAAGSDNFIYVYDLQAN---KCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWD 212
L D ++++++ + +C+ + AH DV V + T ++ S S D+ K++
Sbjct: 118 LATCSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVW-HPTKDILASASYDNTIKMFA 176
Query: 213 RRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
S L H + ID +G +S D+T K+W
Sbjct: 177 ESQLDSDWDCTATLSSHTSTVWSIDFDAEGDRLVSCSDDKTLKIW 221
>UNIPROTKB|Q13216 [details] [associations]
symbol:ERCC8 "DNA excision repair protein ERCC-8"
species:9606 "Homo sapiens" [GO:0010165 "response to X-ray"
evidence=IEA] [GO:0006289 "nucleotide-excision repair"
evidence=IMP;TAS] [GO:0006979 "response to oxidative stress"
evidence=IDA;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0043234 "protein complex" evidence=IDA] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0009411 "response to UV"
evidence=IMP;IDA] [GO:0045739 "positive regulation of DNA repair"
evidence=IMP] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IDA;IMP;TAS] [GO:0003678 "DNA
helicase activity" evidence=IDA] [GO:0032403 "protein complex
binding" evidence=IDA] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IDA] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=IDA] [GO:0000109 "nucleotide-excision
repair complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0016363 "nuclear matrix" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS]
Reactome:REACT_216 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0009411 GO:GO:0005654
GO:GO:0006979 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0032403 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471123 GO:GO:0016363
GO:GO:0000209 GO:GO:0010165 GO:GO:0045739 GO:GO:0051865
GO:GO:0006283 HOGENOM:HOG000248233 KO:K10570 GO:GO:0031464 PDB:4A11
PDBsum:4A11 GO:GO:0000109 Orphanet:90321 Orphanet:90322
Orphanet:90324 Orphanet:178338 CTD:1161 HOVERGEN:HBG005409
OMA:TMLRGHY EMBL:U28413 EMBL:CR536563 EMBL:BT020021 EMBL:AY213194
EMBL:AK314511 EMBL:BC009793 IPI:IPI00012284 IPI:IPI00386696
PIR:A57090 RefSeq:NP_000073.1 UniGene:Hs.435237
ProteinModelPortal:Q13216 SMR:Q13216 DIP:DIP-291N IntAct:Q13216
MINT:MINT-1417899 STRING:Q13216 PhosphoSite:Q13216 DMDM:3121917
PRIDE:Q13216 DNASU:1161 Ensembl:ENST00000265038 GeneID:1161
KEGG:hsa:1161 UCSC:uc003jsl.3 UCSC:uc003jsn.3 GeneCards:GC05M060169
H-InvDB:HIX0004887 HGNC:HGNC:3439 MIM:216400 MIM:609412 MIM:614621
neXtProt:NX_Q13216 PharmGKB:PA27853 InParanoid:Q13216
OrthoDB:EOG4SN1NR PhylomeDB:Q13216 GenomeRNAi:1161 NextBio:4822
ArrayExpress:Q13216 Bgee:Q13216 CleanEx:HS_ERCC8
Genevestigator:Q13216 GermOnline:ENSG00000049167 Uniprot:Q13216
Length = 396
Score = 98 (39.6 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 35/130 (26%), Positives = 60/130 (46%)
Query: 156 LVAAGSDN-FIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWD-R 213
LVA G+ + + DL++ CS + H+ ++ V ++ +++ + S DS K+WD R
Sbjct: 158 LVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVR 217
Query: 214 R---CFIS----KGR-------ANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI 259
R C I+ G+ AN G + G+ F DG + ++ G D +LW+
Sbjct: 218 RASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS---DGLHLLTVGTDNRMRLWNS 274
Query: 260 RKMSSNTTDN 269
NT N
Sbjct: 275 SN-GENTLVN 283
Score = 94 (38.1 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 334 NSVYIYDLVSGAQVAKLDFHNAPVRDCC-WHPIYPMLISSSWDCNIVRWEIPGIGEAPLP 392
+++ +Y + SG Q+ L H V DCC + + L S S DCNI+ W +P + E P+P
Sbjct: 314 STIAVYTVYSGEQITMLKGHYKTV-DCCVFQSNFQELYSGSRDCNILAW-VPSLYE-PVP 370
Score = 77 (32.2 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 29/101 (28%), Positives = 47/101 (46%)
Query: 130 GLDFSADGDEDEF---GIFSVKFS-TDGQELVAAGSDNFIYVYDLQANK----------C 175
GL+ + D D + GI ++ +G+ +++ GSD I +YDL+ + C
Sbjct: 29 GLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVC 88
Query: 176 SL---RIPAHKSDVNTV-CFADETGHLIFSGSDDSLCKVWD 212
S+ H+ V TV + +TG + S S D KVWD
Sbjct: 89 SIGRDHPDVHRYSVETVQWYPHDTG-MFTSSSFDKTLKVWD 128
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 151 (58.2 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 60/232 (25%), Positives = 105/232 (45%)
Query: 40 NSRVYTSQFSNDGSFFVAASQESNIKVYNVD-KNWK--IQKDIE-----TKAL---RWTI 88
N+ + +F++D + A Q+S IK++++D K K +++D T+ L +
Sbjct: 461 NNNMTCIEFNDDSTLVAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQENTRKLIGHSGPV 520
Query: 89 TDTSLSPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVK 148
S SPD ++L+ S V + + ++ + +KG ++ VK
Sbjct: 521 YGVSFSPDNKYLLSCSEDKTVRLWSL-----DTYTALVSYKG---------HTQPVWDVK 566
Query: 149 FSTDGQELVAAGSDNFIYVYDLQANKCSLRIPA-HKSDVNTVCFADETGHLIFSGSDDSL 207
FS G V A D ++ + LRI A H +DV+ V F + + +F+GS D
Sbjct: 567 FSPLGHYFVTASHDQTARLWATD-HIYPLRIFAGHINDVDCVEFHPNSNY-VFTGSSDKT 624
Query: 208 CKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI 259
C++WD + G V +GH + + DGR+ S G+D +WDI
Sbjct: 625 CRMWD----VHTGNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDI 672
Score = 126 (49.4 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 32/123 (26%), Positives = 54/123 (43%)
Query: 147 VKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDS 206
V+F + + SD ++D+ C H + VN + + + G + SG +D
Sbjct: 607 VEFHPNSNYVFTGSSDKTCRMWDVHTGNCVRVFLGHTNSVNCLAVSPD-GRWLASGGEDG 665
Query: 207 LCKVWDRRCFISKGRANGVLMGHLEGITF-IDSRRDGRYFISNGKDQTTKLWDIRKMSSN 265
+ VWD I GR + GH + + RDG +S D + ++WD++K N
Sbjct: 666 IICVWD----IGSGRRLKSMRGHARASLYSLAFSRDGTVLVSGCADNSVRVWDVKK---N 718
Query: 266 TTD 268
T D
Sbjct: 719 TND 721
Score = 119 (46.9 bits), Expect = 0.00080, P = 0.00080
Identities = 55/223 (24%), Positives = 92/223 (41%)
Query: 182 HKSDVNTVC--FADETGHLIFSGSDDSLCKVW--DRRCFIS-------KGRANG-VLMGH 229
H ++ N C F D++ L+ +G DS K+W D + S K + N L+GH
Sbjct: 458 HNTNNNMTCIEFNDDST-LVAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQENTRKLIGH 516
Query: 230 LEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSSNTTDNSRLRDYDWDYRWMEYPSYAR 289
+ + D +Y +S +D+T +LW + ++ + + WD ++ Y
Sbjct: 517 SGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPV-WDVKFSPLGHYF- 574
Query: 290 RLKHPHDQSLATYKGHSV--LRTL---IRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSG 344
+ HDQ+ + + LR I E+ Y++TGSSD + ++D+ +G
Sbjct: 575 -VTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVHTG 633
Query: 345 AQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWEIPGIG 387
V H V P L S D I W+I G G
Sbjct: 634 NCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDI-GSG 675
Score = 46 (21.3 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVD 70
G V+ +FS G +FV AS + +++ D
Sbjct: 557 GHTQPVWDVKFSPLGHYFVTASHDQTARLWATD 589
>WB|WBGene00007972 [details] [associations]
symbol:prp-4 species:6239 "Caenorhabditis elegans"
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0001703
"gastrulation with mouth forming first" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:Z80215
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0016477
GO:GO:0008406 GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR027106 PANTHER:PTHR19846
GO:GO:0001703 InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR PIR:T19776
RefSeq:NP_492363.1 HSSP:O43172 ProteinModelPortal:Q93339 SMR:Q93339
DIP:DIP-26822N IntAct:Q93339 MINT:MINT-1102466 STRING:Q93339
PaxDb:Q93339 EnsemblMetazoa:C36B1.5.1 EnsemblMetazoa:C36B1.5.2
GeneID:183250 KEGG:cel:CELE_C36B1.5 UCSC:C36B1.5.1 CTD:183250
WormBase:C36B1.5 InParanoid:Q93339 NextBio:920460 Uniprot:Q93339
Length = 496
Score = 148 (57.2 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 41/122 (33%), Positives = 61/122 (50%)
Query: 136 DGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADET 195
DG E I SV++ +G E++ SDN + V+DL+ + + +PAH S V V AD
Sbjct: 377 DGHTKE--IHSVEWMPNGYEMITGSSDNSMKVWDLRMRRNTYTMPAHTSVVTRVR-ADAA 433
Query: 196 GHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTK 255
G + S S D K+W + + L GH I +D DG++ S+ D+T K
Sbjct: 434 GQYLVSASFDCTLKMWSTTGWQPLRQ----LQGHDTRILCVDISPDGQWMCSSAFDRTFK 489
Query: 256 LW 257
LW
Sbjct: 490 LW 491
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 151 (58.2 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 41/118 (34%), Positives = 60/118 (50%)
Query: 143 GIFSVKFSTDGQELVAAGS-DNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFS 201
GI SV F + LVAAG+ I ++DL+ K + H+S+ +V F G S
Sbjct: 61 GIDSVTFDAS-EGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNF-HPFGEFFAS 118
Query: 202 GSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI 259
GS D+ K+WD R KG + GH G+ + DGR+ +S G+D K+WD+
Sbjct: 119 GSLDTNLKIWDIR---KKGCIH-TYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDL 172
Score = 126 (49.4 bits), Expect = 0.00015, P = 0.00015
Identities = 49/211 (23%), Positives = 89/211 (42%)
Query: 181 AHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRR 240
AH + VN + ++ ++ +G +D +W I K A L GH GI +
Sbjct: 14 AHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWA----IGKPNAILSLYGHSSGIDSVTFDA 69
Query: 241 DGRYFISNGKDQTTKLWDIRKMSS-NTTDNSRLRDYDWDYR-WMEY---PSYARRLKHPH 295
+ T KLWD+ + T R ++ + E+ S LK
Sbjct: 70 SEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWD 129
Query: 296 DQS---LATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDF 352
+ + TYKGH+ ++R F+P+ ++I +G DN V ++DL +G + +
Sbjct: 130 IRKKGCIHTYKGHTRGVNVLR--FTPD----GRWIVSGGEDNVVKVWDLTAGKLLHEFKS 183
Query: 353 HNAPVRDCCWHPIYPMLISSSWDCNIVRWEI 383
H ++ +HP +L + S D + W++
Sbjct: 184 HEGKIQSLDFHPHEFLLATGSADKTVKFWDL 214
Score = 121 (47.7 bits), Expect = 0.00052, P = 0.00052
Identities = 54/237 (22%), Positives = 93/237 (39%)
Query: 156 LVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRC 215
LV G D+ + ++ + L + H S +++V F D + L+ +G+ K+WD
Sbjct: 32 LVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTF-DASEGLVAAGAASGTIKLWD--- 87
Query: 216 FISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSSNTTDNSRLRD- 274
+ + + L GH ++ G +F S D K+WDIRK T R
Sbjct: 88 -LEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGV 146
Query: 275 ----YDWDYRWMEYPSYARRLKH---PHDQSLATYKGHS-VLRTLIRCYFSPEYSTAQKY 326
+ D RW+ +K + L +K H +++L F P +
Sbjct: 147 NVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLD---FHPH----EFL 199
Query: 327 IYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPI-YPMLISSSWDCNIVRWE 382
+ TGS+D +V +DL + + VR ++P +L I WE
Sbjct: 200 LATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKSVLCGLQESLKIFSWE 256
>UNIPROTKB|G4MXN3 [details] [associations]
symbol:MGG_01259 "Pre-mRNA splicing factor" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 KO:K12662 RefSeq:XP_003714171.1
ProteinModelPortal:G4MXN3 EnsemblFungi:MGG_01259T0 GeneID:2679643
KEGG:mgr:MGG_01259 Uniprot:G4MXN3
Length = 531
Score = 128 (50.1 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 38/142 (26%), Positives = 63/142 (44%)
Query: 147 VKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDS 206
V F G+ L +A D ++D++ L H V V F + G L+ S DS
Sbjct: 307 VDFHPSGRFLASASEDTSWRLWDVEKRTELLLQEGHSRGVFAVSFNGD-GSLLASAGQDS 365
Query: 207 LCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSSNT 266
+ ++WD R + +G + GH++ I +D DG +S D K WD+RK+
Sbjct: 366 IGRIWDLRTGRTIMILDGHMDGHIKPIYALDWGSDGHRVLSASADGWIKCWDVRKVQRTG 425
Query: 267 ---TDNSRLRDYDWDYRWMEYP 285
S + D W ++ ++ P
Sbjct: 426 GVGAHTSAVSDMRW-FKGLDGP 446
Score = 107 (42.7 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 49/192 (25%), Positives = 76/192 (39%)
Query: 39 MNSRVYTSQFSNDGSFFVAASQESNIKVYNVDK---------N-WKIQKDIETKALRW-- 86
MN R +T++ S F A QESN+ +V+ N W + +D L
Sbjct: 242 MNLRGHTNKVSGMCWFPGATLQESNVSAESVNLATGGAEGQVNLWSLSQDTPLATLSGHT 301
Query: 87 -TITDTSLSPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIF 145
+ P RFL AS + DV E + + +G G+F
Sbjct: 302 QRVCRVDFHPSGRFLASASEDTSWRLWDV-----EKRTELLLQEG---------HSRGVF 347
Query: 146 SVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSD-VNTVCFAD--ETGHLIFSG 202
+V F+ DG L +AG D+ ++DL+ + + + H + + D GH + S
Sbjct: 348 AVSFNGDGSLLASAGQDSIGRIWDLRTGRTIMILDGHMDGHIKPIYALDWGSDGHRVLSA 407
Query: 203 SDDSLCKVWDRR 214
S D K WD R
Sbjct: 408 SADGWIKCWDVR 419
Score = 87 (35.7 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 226 LMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
L GH + +D RDGR+ +S G D+T KLW
Sbjct: 492 LSGHTGPVASVDVSRDGRWIVSGGHDRTVKLW 523
Score = 77 (32.2 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 34/152 (22%), Positives = 71/152 (46%)
Query: 36 VDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSP 95
+ G RV F G F +AS++++ ++++V+K ++ ++ R S +
Sbjct: 297 LSGHTQRVCRVDFHPSGRFLASASEDTSWRLWDVEKRTELL--LQEGHSRGVFA-VSFNG 353
Query: 96 DQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQE 155
D L A +I I D+ + + I LD DG I+++ + +DG
Sbjct: 354 DGSLLASAGQDSIGRIWDLRTGR-----TIMI---LDGHMDGHIKP--IYALDWGSDGHR 403
Query: 156 LVAAGSDNFIYVYDLQANKCSLRIPAHKSDVN 187
+++A +D +I +D++ + + + AH S V+
Sbjct: 404 VLSASADGWIKCWDVRKVQRTGGVGAHTSAVS 435
Score = 42 (19.8 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 326 YIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPV 357
++ + D+ V IY A V L H PV
Sbjct: 468 FLVSSGFDHKVNIYSADDWALVQSLSGHTGPV 499
>UNIPROTKB|Q5JKX0 [details] [associations]
symbol:B1147A04.35 "cDNA clone:J013000B23, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0001700
"embryonic development via the syncytial blastoderm" evidence=ISS]
[GO:0005623 "cell" evidence=ISS] [GO:0009909 "regulation of flower
development" evidence=ISS;IDA] [GO:0031124 "mRNA 3'-end processing"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001700 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0005623 GO:GO:0009909
GO:GO:0031124 GO:GO:0080008 EMBL:AP003735 EMBL:AK111493
STRING:Q5JKX0 EnsemblPlants:LOC_Os01g72220.1 OMA:FACAISD
Uniprot:Q5JKX0
Length = 527
Score = 148 (57.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 61/239 (25%), Positives = 110/239 (46%)
Query: 151 TDGQELVAAGSDNFIYVYDLQANKCSLRI--PAHKSDVNTVCFADETGHLIFSGSDDSLC 208
++ + + G D Y Q+N ++++ AH+ V + F T S SDD+
Sbjct: 16 SNNENWMVTGDDGGAIKY-WQSNMNNVKVNKTAHRESVRDLSFC-RTDLKFCSCSDDTTV 73
Query: 209 KVWD-RRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI---RKMSS 264
KVWD RC + R+ L GH + +D +S GKD KLWD R++ S
Sbjct: 74 KVWDFARC--QEERS---LTGHGWDVKSVDWHPTKSLLVSGGKDYLVKLWDAKSGRELRS 128
Query: 265 NTTDNSRLRDYDWDYR--WMEYPSYARRLKHPHDQS---LATYKGHSVLRTLIRCYFSPE 319
+ ++ W+ W+ S + +K +S L +++GH+ + + + P
Sbjct: 129 FHGHKNIVQCVKWNQNGNWVLTASKDQIIKLYDIRSMKELESFRGHN--KDVTALAWHPF 186
Query: 320 YSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNA---PVRDCCWHPIYPMLISSSWD 375
+ ++Y +GS D +++ + LV G + +++ +NA V D WHP+ +L S D
Sbjct: 187 H---EEYFVSGSYDGAIFHW-LV-GHETPQIEINNAHDNSVWDLAWHPVGYLLCSGGND 240
Score = 133 (51.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 44/216 (20%), Positives = 89/216 (41%)
Query: 179 IPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDS 238
+ AH V ++ +++ ++ +G D K W ++ + N H E + +
Sbjct: 3 LQAHDQAVRSMIWSNNENWMV-TGDDGGAIKYWQSN--MNNVKVNKT--AHRESVRDLSF 57
Query: 239 RRDGRYFISNGKDQTTKLWDIRKMSSNTTDNSRLRDYDWDYRWMEY-PSYARRLKHPHD- 296
R F S D T K+WD + + L + WD + +++ P+ + + D
Sbjct: 58 CRTDLKFCSCSDDTTVKVWDFARCQEERS----LTGHGWDVKSVDWHPTKSLLVSGGKDY 113
Query: 297 ----------QSLATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQ 346
+ L ++ GH + +++C +++ ++ T S D + +YD+ S +
Sbjct: 114 LVKLWDAKSGRELRSFHGH---KNIVQCV---KWNQNGNWVLTASKDQIIKLYDIRSMKE 167
Query: 347 VAKLDFHNAPVRDCCWHPIYP-MLISSSWDCNIVRW 381
+ HN V WHP + +S S+D I W
Sbjct: 168 LESFRGHNKDVTALAWHPFHEEYFVSGSYDGAIFHW 203
>ZFIN|ZDB-GENE-070112-342 [details] [associations]
symbol:gnb5a "guanine nucleotide binding protein (G
protein), beta 5a" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 ZFIN:ZDB-GENE-070112-342 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
OMA:ATDGLHE OrthoDB:EOG4XWFXZ EMBL:AL954697 EMBL:BC129375
IPI:IPI00512905 RefSeq:NP_001073650.1 UniGene:Dr.108630 SMR:A1L271
Ensembl:ENSDART00000027720 GeneID:562813 KEGG:dre:562813 CTD:562813
InParanoid:A1L271 NextBio:20884602 Uniprot:A1L271
Length = 355
Score = 145 (56.1 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 57/254 (22%), Positives = 104/254 (40%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCS------LRIPAHKSDVNTVCFADETGH 197
+ + ++ G + G DN VY L +K + H + ++ CF +
Sbjct: 110 VMACAYAPSGCAVACGGLDNKCSVYPLSLDKNENLAAKKKSVAMHTNYLSACCFTNSDMQ 169
Query: 198 LIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFID--SRRDGRYFISNGKDQTTK 255
++ S S D C +WD + G+ GH + +D G F+S G D+
Sbjct: 170 ILTS-SGDGTCALWD----VESGQMLQSFHGHAADVLCLDLAPSETGNTFVSGGCDKKAC 224
Query: 256 LWDIR------KMSSNTTDNSRLRDYDWDYRWMEYPSYAR-RLKHPH-DQSLATYKGHSV 307
+WD+R S+ +D + +R Y + A RL D+ +A Y S+
Sbjct: 225 VWDMRTGQCVQSFESHDSDINSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESI 284
Query: 308 LRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYP 367
+ S ++S + + ++ G +D ++ ++D++ GA+V+ L H V P
Sbjct: 285 IFGAS----SVDFSLSGRLLFGGYNDYTINVWDVLKGARVSILFGHENRVSTLRVSPDGT 340
Query: 368 MLISSSWDCNIVRW 381
S SWD + W
Sbjct: 341 AFCSGSWDHTLRIW 354
>WB|WBGene00001680 [details] [associations]
symbol:gpb-2 species:6239 "Caenorhabditis elegans"
[GO:0040007 "growth" evidence=IMP] [GO:0030163 "protein catabolic
process" evidence=IMP] [GO:0008277 "regulation of G-protein coupled
receptor protein signaling pathway" evidence=IGI] [GO:0046662
"regulation of oviposition" evidence=IMP] [GO:0040012 "regulation
of locomotion" evidence=IMP] [GO:0007631 "feeding behavior"
evidence=IMP] [GO:0007212 "dopamine receptor signaling pathway"
evidence=IMP] [GO:0032094 "response to food" evidence=IMP]
[GO:0007213 "G-protein coupled acetylcholine receptor signaling
pathway" evidence=IGI;IMP] [GO:0043051 "regulation of pharyngeal
pumping" evidence=IMP] [GO:0043025 "neuronal cell body"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0040007 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007212
GO:GO:0007631 GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0040012 GO:GO:0046662
GO:GO:0043051 GO:GO:0032094 GO:GO:0007213 GO:GO:0030163
GO:GO:0008277 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 InterPro:IPR016346 PIRSF:PIRSF002394
EMBL:AF291847 EMBL:Z71263 PIR:T22478 RefSeq:NP_492072.1
UniGene:Cel.18555 ProteinModelPortal:Q20636 SMR:Q20636
STRING:Q20636 PaxDb:Q20636 EnsemblMetazoa:F52A8.2.1
EnsemblMetazoa:F52A8.2.2 GeneID:172483 KEGG:cel:CELE_F52A8.2
UCSC:F52A8.2 CTD:172483 WormBase:F52A8.2 InParanoid:Q20636
KO:K04539 OMA:ATDGLHE NextBio:875701 Uniprot:Q20636
Length = 356
Score = 145 (56.1 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 59/252 (23%), Positives = 104/252 (41%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLR----IPAHKSDVNTVCFADETGHLI 199
+ + FS Q + G DN V L ++ + H S ++ F + +LI
Sbjct: 113 VMACAFSPSSQMIACGGLDNKCSVVPLSFEDDIIQKKRQVATHTSYMSCCTFL-RSDNLI 171
Query: 200 FSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRR--DGRYFISNGKDQTTKLW 257
+GS DS C +WD + G+ GH + ID + G FIS G D+ + +W
Sbjct: 172 LTGSGDSTCAIWD----VESGQLIQNFHGHTGDVFAIDVPKCDTGNTFISAGADKHSLVW 227
Query: 258 DIRK------MSSNTTDNSRLRDY-DWD-YRWMEYPSYARRLKHPHDQSLATYKGHSVLR 309
DIR + D + +R + + D + + R D+ + Y+ S+L
Sbjct: 228 DIRSGQCVQSFEGHEADINTVRFHPNGDAFATGSDDATCRLFDLRADRQVCVYEKESILF 287
Query: 310 TLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPML 369
+ ++S + + ++ G D V ++D + A+ + L H + P +
Sbjct: 288 PVN----GVDFSLSGRILFAGYGDYRVGVWDSLKCARHSVLYGHENRISCLRTSPDGTAV 343
Query: 370 ISSSWDCNIVRW 381
S+SWDC I W
Sbjct: 344 CSASWDCTIRIW 355
Score = 128 (50.1 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 37/131 (28%), Positives = 60/131 (45%)
Query: 140 DEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLI 199
D F I K T G ++AG+D V+D+++ +C H++D+NTV F G
Sbjct: 200 DVFAIDVPKCDT-GNTFISAGADKHSLVWDIRSGQCVQSFEGHEADINTVRF-HPNGDAF 257
Query: 200 FSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITF----IDSRRDGRYFISNGKDQTTK 255
+GSDD+ C+++D R V + E I F +D GR + D
Sbjct: 258 ATGSDDATCRLFDLRA------DRQVCVYEKESILFPVNGVDFSLSGRILFAGYGDYRVG 311
Query: 256 LWDIRKMSSNT 266
+WD K + ++
Sbjct: 312 VWDSLKCARHS 322
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 146 (56.5 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 58/236 (24%), Positives = 108/236 (45%)
Query: 156 LVAAGS-DNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRR 214
LVA GS D ++D+Q+ + + H +++ ++ F + +G+ I +GS D VW+
Sbjct: 191 LVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSF-NTSGNRIITGSFDHTVTVWEA- 248
Query: 215 CFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI---RKMSSNTTDNSR 271
GR L+GH I+ D ++ D+T KLWD + +++ T +
Sbjct: 249 ---DTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDE 305
Query: 272 LRDYDWDY--RWMEYPSY---ARRLKHPHDQSLATYKGHSVLRTLIRCYFSPEYSTAQKY 326
+ D +DY + + S AR + + +GH + + F+P+ +
Sbjct: 306 ILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHE--GEISKISFNPQGNR---- 359
Query: 327 IYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWD--CNIVR 380
+ TGSSD + I+D +G + L+ H + C ++ ++I+ S D C I R
Sbjct: 360 LLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIWR 415
Score = 145 (56.1 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 55/248 (22%), Positives = 105/248 (42%)
Query: 144 IFSVKFSTDGQELVAAGS-DNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSG 202
++++ F+ + +A GS D ++ ++ KC H +++ + F ++ L+ +G
Sbjct: 137 VYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQST-LVATG 195
Query: 203 SDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI--- 259
S D+ K+WD I G L GH I + G I+ D T +W+
Sbjct: 196 SMDTTAKLWD----IQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTG 251
Query: 260 RKMSSNTTDNSRLRD--YDWDYRWMEYPSYARRLK---HPHDQSLATYKGHSVLRTLIRC 314
RK+ + + + ++WD + S + K + + +AT GH L C
Sbjct: 252 RKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDD-EILDSC 310
Query: 315 YFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSW 374
+ +Y+ K I T S+D + I+ + V KL+ H + ++P L++ S
Sbjct: 311 F---DYTG--KLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSS 365
Query: 375 DCNIVRWE 382
D W+
Sbjct: 366 DKTARIWD 373
Score = 141 (54.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 50/236 (21%), Positives = 93/236 (39%)
Query: 146 SVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDD 205
+V + G + D ++D + + + H++ V + F + G I +GS D
Sbjct: 97 NVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFD 156
Query: 206 SLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSSN 265
CK+W + G+ GH I + + D T KLWDI+
Sbjct: 157 KTCKLWS----VETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEV 212
Query: 266 TTDNSRLRDYDWDYRWMEYPSYARRL-KHPHDQSLATYK---GHSVLRTLIRC--YFSPE 319
T L + + + + + R+ D ++ ++ G V + C S
Sbjct: 213 FT----LTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAV 268
Query: 320 YSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWD 375
++ I TGS D + ++D V+G VA L H+ + D C+ ++ ++S D
Sbjct: 269 FNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASAD 324
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 149 (57.5 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 51/214 (23%), Positives = 91/214 (42%)
Query: 179 IPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDS 238
I AH S+V+++ +G L+ +G +D +W +SK L GH + I
Sbjct: 16 IVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWA----VSKPNCIMSLTGHTSAVGCIQF 71
Query: 239 RRDGRYFISNGKDQTTKLWDIRKMSS-NTTDNSRLRDYDWDYRWM-EY---PSYARRLKH 293
++ + +LWD+ T + D+ M EY S +K
Sbjct: 72 NSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKL 131
Query: 294 ---PHDQSLATYKGHSVLRTLIRCY-FSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAK 349
+ YKGH+ +RC FSP+ K++ + S D++V ++DL++G + +
Sbjct: 132 WDVRRKGCVFRYKGHT---QAVRCLAFSPD----GKWLASASDDSTVKLWDLIAGKMITE 184
Query: 350 LDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWEI 383
H + V +HP +L S S D + W++
Sbjct: 185 FTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDL 218
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 54/242 (22%), Positives = 97/242 (40%)
Query: 151 TDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKV 210
+ G+ L G D + ++ + C + + H S V + F + + + +GS ++
Sbjct: 31 SSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQF-NSSEERVVAGSLSGSLRL 89
Query: 211 WDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMS-----SN 265
WD + + LMGH I+ +D G Y S D KLWD+R+
Sbjct: 90 WD----LEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKG 145
Query: 266 TTDNSRLRDYDWDYRWMEYPSYARRLKHPH---DQSLATYKGHSVLRTLIRCYFSP-EYS 321
T R + D +W+ S +K + + + H+ +++ F P EY
Sbjct: 146 HTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQ--FHPNEYL 203
Query: 322 TAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDC-NIVR 380
A +GS+D +V ++DL + + VR ++P L S S + +
Sbjct: 204 LA-----SGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGSENTLRVYG 258
Query: 381 WE 382
WE
Sbjct: 259 WE 260
Score = 135 (52.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 36/126 (28%), Positives = 63/126 (50%)
Query: 147 VKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDS 206
++F++ + +VA + ++DL+A K + HK+ ++++ F G + SGS DS
Sbjct: 69 IQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDF-HPMGEYLASGSVDS 127
Query: 207 LCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI--RKMSS 264
K+WD R KG GH + + + DG++ S D T KLWD+ KM +
Sbjct: 128 NIKLWDVR---RKGCVFRY-KGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMIT 183
Query: 265 NTTDNS 270
T ++
Sbjct: 184 EFTSHT 189
Score = 133 (51.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 33/121 (27%), Positives = 57/121 (47%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
I S+ F G+ L + D+ I ++D++ C R H V + F+ + G + S S
Sbjct: 108 ISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPD-GKWLASAS 166
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGK-DQTTKLWDIRKM 262
DDS K+WD + G+ H + + + Y +++G D+T KLWD+ K
Sbjct: 167 DDSTVKLWD----LIAGKMITEFTSHTSAVNVVQFHPN-EYLLASGSADRTVKLWDLEKF 221
Query: 263 S 263
+
Sbjct: 222 N 222
Score = 118 (46.6 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 39/129 (30%), Positives = 58/129 (44%)
Query: 129 KGLDFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNT 188
KG F G + + FS DG+ L +A D+ + ++DL A K +H S VN
Sbjct: 137 KGCVFRYKGHTQ--AVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNV 194
Query: 189 VCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISN 248
V F +L+ SGS D K+WD F G + G G + + F DG S
Sbjct: 195 VQFHPNE-YLLASGSADRTVKLWDLEKFNMIGSSEGET-GVVRSVLF---NPDGSCLYS- 248
Query: 249 GKDQTTKLW 257
G + T +++
Sbjct: 249 GSENTLRVY 257
Score = 46 (21.3 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 22/106 (20%), Positives = 46/106 (43%)
Query: 10 SGRGRFSAADSCHV-LSRYLPVNGPWKVDGMNSRVYTSQFSNDGSFFVAASQESNIKVYN 68
SGR + + C V + N + G S V QF++ VA S ++++++
Sbjct: 32 SGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWD 91
Query: 69 VDKNWKIQKDIETKALRWTITDTSLSPDQRFLVYASICAIVNIVDV 114
++ ++ + KA +I+ P +L S+ + + + DV
Sbjct: 92 LEAAKILRTLMGHKA---SISSLDFHPMGEYLASGSVDSNIKLWDV 134
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 146 (56.5 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 57/241 (23%), Positives = 108/241 (44%)
Query: 36 VDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSP 95
++G + + T FS DG + S ++ IK+++ + +++ +E + ++ + SP
Sbjct: 37 LEGHSDWIETVTFSPDGRLLASGSNDTTIKLWD-PASGGLKQTLEGHSS--SVQSVAFSP 93
Query: 96 DQRFLVYASICAIVNIVDVGS-SARESLANVTIH-KGLDFSADGD--EDEFG-------- 143
+ + L S + + + S S + ++ + + + FS +G G
Sbjct: 94 NGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLWNPAIGSLKHTIEG 153
Query: 144 ----IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLR--IPAHKSDVNTVCFADETGH 197
+ SV FS DGQ L + ++ I ++D + C L+ + H + V + F+ + G
Sbjct: 154 HSDWVLSVAFSPDGQLLASGSAEKTIKLWD--SATCGLKHTLGGHSNWVLPLVFSPD-GR 210
Query: 198 LIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
L+ SGS+D+ K+WD G L GH I + +G+ S D T KLW
Sbjct: 211 LLASGSNDATIKLWDP----PSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLW 266
Query: 258 D 258
D
Sbjct: 267 D 267
Score = 137 (53.3 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 66/282 (23%), Positives = 117/282 (41%)
Query: 104 SICAIV-NIVDVGSSARESLANVTIHK--GLDFSADGDEDEFGIFSVKFSTDGQELVAAG 160
SI I+ +IVD ++ + +L + G + ++ I +V FS DG+ L +
Sbjct: 2 SILGIITDIVDCINTLQSTLQRPKVEDNWGPELQTLEGHSDW-IETVTFSPDGRLLASGS 60
Query: 161 SDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKG 220
+D I ++D + + H S V +V F+ G L+ SGS D+ K+W+ K
Sbjct: 61 NDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPN-GQLLASGSSDTTIKLWNSASDSLKH 119
Query: 221 RANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSSNTTDNSRLRDYDWDYR 280
G +E + F + + I + K D + + D L +
Sbjct: 120 TMEGH-SDRVESVAFSPNGQLWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKT 178
Query: 281 WMEYPSYARRLKHPHDQSLATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYD 340
+ S LKH T GHS ++ FSP+ + + +GS+D ++ ++D
Sbjct: 179 IKLWDSATCGLKH-------TLGGHS--NWVLPLVFSPD----GRLLASGSNDATIKLWD 225
Query: 341 LVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWE 382
SG+ L+ H+ + + P +L S S D I W+
Sbjct: 226 PPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWD 267
Score = 115 (45.5 bits), Expect = 0.00096, P = 0.00096
Identities = 63/250 (25%), Positives = 99/250 (39%)
Query: 146 SVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDD 205
SV FS +GQ L + SD I +++ ++ + H V +V F+ G L
Sbjct: 88 SVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPN-GQL------- 139
Query: 206 SLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSSN 265
W+ G + GH + + + DG+ S ++T KLWD
Sbjct: 140 -----WNPAI----GSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLK 190
Query: 266 TT----DNSRLR-DYDWDYRWMEYPSYARRLK--HPHDQSLA-TYKGHSVLRTLIRCYFS 317
T N L + D R + S +K P SL T +GHS + FS
Sbjct: 191 HTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHS--NKIESLAFS 248
Query: 318 PEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCN 377
P + + +GSSD ++ ++D +G+ L H+ V + P +L S S D
Sbjct: 249 PN----GQLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNT 304
Query: 378 IVRWEIPGIG 387
I W+ P G
Sbjct: 305 IKLWD-PATG 313
>RGD|708344 [details] [associations]
symbol:Gnb3 "guanine nucleotide binding protein (G protein), beta
polypeptide 3" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0043005 "neuron projection" evidence=IDA] [GO:0044297 "cell
body" evidence=IDA] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 RGD:708344 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043005 GO:GO:0004871
GO:GO:0044297 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS OrthoDB:EOG4J118C
EMBL:L29090 EMBL:BC086422 IPI:IPI00204239 PIR:I53871
RefSeq:NP_068630.1 UniGene:Rn.27065 ProteinModelPortal:P52287
SMR:P52287 STRING:P52287 PhosphoSite:P52287 PRIDE:P52287
Ensembl:ENSRNOT00000021481 GeneID:60449 KEGG:rno:60449
UCSC:RGD:708344 InParanoid:P52287 NextBio:612200
ArrayExpress:P52287 Genevestigator:P52287
GermOnline:ENSRNOG00000015541 Uniprot:P52287
Length = 340
Score = 144 (55.7 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 56/251 (22%), Positives = 100/251 (39%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQAN----KCSLRIPAHKSDVNTVCFADETGHLI 199
+ + ++ G + G DN +Y L++ K S + AH ++ F D+ I
Sbjct: 100 VMTCAYAPSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNN--I 157
Query: 200 FSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI 259
+ S D+ C +WD I G+ V +GH + D + FIS D + KLWD+
Sbjct: 158 VTSSGDTTCALWD----IETGQQKTVFVGHTGDCMSLAVSPDYKLFISGACDASAKLWDV 213
Query: 260 RKMSSNTTDNSRLRDYDWDYRWMEYPSYA--------RRLKHPHDQSLATYKGHSVLRTL 311
R+ + T D + + + R DQ L Y S++ +
Sbjct: 214 REGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSHESIICGI 273
Query: 312 IRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLIS 371
S +S + + ++ G D + ++D + +V L H+ V C M ++
Sbjct: 274 T----SVAFSLSGRLLFAGYDDFNCNVWDSLKCERVGVLSGHDNRV-SCLGVTADGMAVA 328
Query: 372 S-SWDCNIVRW 381
+ SWD + W
Sbjct: 329 TGSWDSFLKIW 339
Score = 117 (46.2 bits), Expect = 0.00038, P = 0.00038
Identities = 34/121 (28%), Positives = 58/121 (47%)
Query: 141 EFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKS---DVNTVCFADETGH 197
E I ++ F +G+ + D ++DL+A++ L +H+S + +V F+ +G
Sbjct: 226 ESDINAICFFPNGEAICTGSDDASCRLFDLRADQ-ELTAYSHESIICGITSVAFS-LSGR 283
Query: 198 LIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
L+F+G DD C VWD K GVL GH ++ + DG + D K+W
Sbjct: 284 LLFAGYDDFNCNVWDSL----KCERVGVLSGHDNRVSCLGVTADGMAVATGSWDSFLKIW 339
Query: 258 D 258
+
Sbjct: 340 N 340
Score = 115 (45.5 bits), Expect = 0.00063, P = 0.00063
Identities = 54/209 (25%), Positives = 82/209 (39%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
I+++ ++TD + LV+A D + V+D IP S V T +A +G+ + G
Sbjct: 58 IYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAP-SGNFVACGG 116
Query: 204 DDSLCKVWD---RRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
D++C ++ R + R G+L F+D D S+G D T LWDI
Sbjct: 117 LDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLD---DNNIVTSSG-DTTCALWDIE 172
Query: 261 KMSSNTTDNSRLRD-----YDWDYRWM---EYPSYARRLKHPHDQSLATYKGHSVLRTLI 312
T D DY+ + A+ T+ GH I
Sbjct: 173 TGQQKTVFVGHTGDCMSLAVSPDYKLFISGACDASAKLWDVREGTCRQTFTGHESDINAI 232
Query: 313 RCYFSPEYSTAQKYIYTGSSDNSVYIYDL 341
C+F P I TGS D S ++DL
Sbjct: 233 -CFF-PNGEA----ICTGSDDASCRLFDL 255
>UNIPROTKB|Q9HAV0 [details] [associations]
symbol:GNB4 "Guanine nucleotide-binding protein subunit
beta-4" species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006112 "energy reserve metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006112 GO:GO:0004871
GO:GO:0071377 PRINTS:PR00319 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 HPA:HPA040736 EMBL:AF300648 EMBL:AK001890
EMBL:BC000873 IPI:IPI00012451 RefSeq:NP_067642.1 UniGene:Hs.173030
ProteinModelPortal:Q9HAV0 SMR:Q9HAV0 IntAct:Q9HAV0
MINT:MINT-1135986 STRING:Q9HAV0 PhosphoSite:Q9HAV0 DMDM:22256759
OGP:Q9HAV0 PeptideAtlas:Q9HAV0 PRIDE:Q9HAV0 DNASU:59345
Ensembl:ENST00000232564 Ensembl:ENST00000468623 GeneID:59345
KEGG:hsa:59345 UCSC:uc003fjv.4 CTD:59345 GeneCards:GC03M179113
HGNC:HGNC:20731 HPA:CAB018383 HPA:CAB018737 MIM:610863
neXtProt:NX_Q9HAV0 PharmGKB:PA134864200 InParanoid:Q9HAV0 KO:K04538
OMA:GACDATS PhylomeDB:Q9HAV0 GenomeRNAi:59345 NextBio:65246
ArrayExpress:Q9HAV0 Bgee:Q9HAV0 CleanEx:HS_GNB4
Genevestigator:Q9HAV0 GermOnline:ENSG00000114450 Uniprot:Q9HAV0
Length = 340
Score = 144 (55.7 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 54/251 (21%), Positives = 104/251 (41%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRI----PAHKSDVNTVCFADETGHLI 199
+ + ++ G + G DN +Y+L+ + ++R+ P H ++ F D++ I
Sbjct: 100 VMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQ--I 157
Query: 200 FSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI 259
+ S D+ C +WD I + GH + + D R F+S D ++KLWDI
Sbjct: 158 VTSSGDTTCALWD----IETAQQTTTFTGHSGDVMSLSLSPDMRTFVSGACDASSKLWDI 213
Query: 260 R------KMSSNTTDNSRLRDYDWDYRWMEYPSYA--RRLKHPHDQSLATYKGHSVLRTL 311
R + + +D + + + Y + A R DQ L Y +++ +
Sbjct: 214 RDGMCRQSFTGHVSDINAVSFFPNGYAFATGSDDATCRLFDLRADQELLLYSHDNIICGI 273
Query: 312 IRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLIS 371
S +S + + + G D + ++D + G + L H+ V C M ++
Sbjct: 274 T----SVAFSKSGRLLLAGYDDFNCNVWDTLKGDRAGVLAGHDNRV-SCLGVTDDGMAVA 328
Query: 372 S-SWDCNIVRW 381
+ SWD + W
Sbjct: 329 TGSWDSFLRIW 339
Score = 116 (45.9 bits), Expect = 0.00049, P = 0.00049
Identities = 35/127 (27%), Positives = 58/127 (45%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
I+++ + D + LV+A D + ++D IP S V T +A +G+ + G
Sbjct: 58 IYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAP-SGNYVACGG 116
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGH---LEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
D++C +++ + R + L GH L F+D D + S+G D T LWDI
Sbjct: 117 LDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLD---DSQIVTSSG-DTTCALWDIE 172
Query: 261 KMSSNTT 267
TT
Sbjct: 173 TAQQTTT 179
Score = 114 (45.2 bits), Expect = 0.00082, P = 0.00082
Identities = 32/118 (27%), Positives = 56/118 (47%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKS---DVNTVCFADETGHLIF 200
I +V F +G D ++DL+A++ L + +H + + +V F+ ++G L+
Sbjct: 229 INAVSFFPNGYAFATGSDDATCRLFDLRADQ-ELLLYSHDNIICGITSVAFS-KSGRLLL 286
Query: 201 SGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWD 258
+G DD C VWD KG GVL GH ++ + DG + D ++W+
Sbjct: 287 AGYDDFNCNVWDTL----KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN 340
>MGI|MGI:95785 [details] [associations]
symbol:Gnb3 "guanine nucleotide binding protein (G protein),
beta 3" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0043005 "neuron projection" evidence=ISO] [GO:0044297 "cell
body" evidence=ISO] [GO:0051020 "GTPase binding" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95785 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
EMBL:AC002397 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784
KO:K07825 OMA:NMCSIYS OrthoDB:EOG4J118C EMBL:AK014789 EMBL:BC018239
EMBL:U38494 IPI:IPI00116938 RefSeq:NP_038558.1 UniGene:Mm.68889
ProteinModelPortal:Q61011 SMR:Q61011 STRING:Q61011
PhosphoSite:Q61011 PaxDb:Q61011 PRIDE:Q61011
Ensembl:ENSMUST00000024206 GeneID:14695 KEGG:mmu:14695
InParanoid:Q61011 NextBio:286643 Bgee:Q61011 Genevestigator:Q61011
GermOnline:ENSMUSG00000023439 Uniprot:Q61011
Length = 340
Score = 144 (55.7 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 56/251 (22%), Positives = 101/251 (40%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQAN----KCSLRIPAHKSDVNTVCFADETGHLI 199
+ + ++ G + G DN +Y+L++ K S + AH ++ F D+ I
Sbjct: 100 VMTCAYAPSGNFVACGGLDNMCSIYNLKSREGNVKVSRELSAHTGYLSCCRFLDDNN--I 157
Query: 200 FSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI 259
+ S D+ C +WD I G+ V +GH + D + FIS D + KLWD+
Sbjct: 158 VTSSGDTTCALWD----IETGQQKTVFVGHTGDCMSLAVSPDYKLFISGACDASAKLWDV 213
Query: 260 RKMSSNTTDNSRLRDYDWDYRWMEYPSYA--------RRLKHPHDQSLATYKGHSVLRTL 311
R+ + T D + + + R DQ L Y S++ +
Sbjct: 214 REGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSQESIICGI 273
Query: 312 IRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLIS 371
S +S + + ++ G D + ++D + +V L H+ V C M ++
Sbjct: 274 T----SVAFSLSGRLLFAGYDDFNCNVWDSLKCERVGILSGHDNRV-SCLGVTADGMAVA 328
Query: 372 S-SWDCNIVRW 381
+ SWD + W
Sbjct: 329 TGSWDSFLKIW 339
Score = 116 (45.9 bits), Expect = 0.00049, P = 0.00049
Identities = 54/209 (25%), Positives = 83/209 (39%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
I+++ ++TD + LV+A D + V+D IP S V T +A +G+ + G
Sbjct: 58 IYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAP-SGNFVACGG 116
Query: 204 DDSLCKVWD---RRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
D++C +++ R + R G+L F+D D S+G D T LWDI
Sbjct: 117 LDNMCSIYNLKSREGNVKVSRELSAHTGYLSCCRFLD---DNNIVTSSG-DTTCALWDIE 172
Query: 261 KMSSNTTDNSRLRD-----YDWDYRWM---EYPSYARRLKHPHDQSLATYKGHSVLRTLI 312
T D DY+ + A+ T+ GH I
Sbjct: 173 TGQQKTVFVGHTGDCMSLAVSPDYKLFISGACDASAKLWDVREGTCRQTFTGHESDINAI 232
Query: 313 RCYFSPEYSTAQKYIYTGSSDNSVYIYDL 341
C+F P I TGS D S ++DL
Sbjct: 233 -CFF-PNGEA----ICTGSDDASCRLFDL 255
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 148 (57.2 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 67/278 (24%), Positives = 111/278 (39%)
Query: 126 TIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSD 185
T+H+ S D D + + ++ FS DG+ LV D I ++DL K H+ D
Sbjct: 349 TLHEE---SPDPSRDLY-VRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQD 404
Query: 186 VNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLE-GITFIDSRRDGRY 244
+ ++ F+ G I SGS D ++WD + G+ +L +E G+T I + ++
Sbjct: 405 IYSLDFS-HNGRFIVSGSGDRTARLWD----VETGQC--ILKLEIENGVTAIAISPNDQF 457
Query: 245 FISNGKDQTTKLWDI-----RKMSSN---------TTDNSRLRDYDWDYRWMEYPSYARR 290
DQ ++W + ++ + + D+S L D + A R
Sbjct: 458 IAVGSLDQIIRVWSVSGTLVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATR 517
Query: 291 ---LK--HPHDQSLATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGA 345
L P ATY GH+ ++ SP+ ++ +GS D S+ +DL +G
Sbjct: 518 SVGLSAIKPEGICKATYTGHTDF--VLSVAVSPD----SRWGLSGSKDRSMQFWDLQTGQ 571
Query: 346 QVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWEI 383
H V C+ P S S D W I
Sbjct: 572 SYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIWSI 609
Score = 144 (55.7 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 36/119 (30%), Positives = 61/119 (51%)
Query: 147 VKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSD------VNTVCFADETGHLIF 200
VKFS +G+ L A G + V+D+Q K + D V T+ F+ + +L+
Sbjct: 319 VKFSNNGKYL-ATGCNQAANVFDVQTGKKLFTLHEESPDPSRDLYVRTIAFSPDGKYLV- 376
Query: 201 SGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI 259
+G++D K+WD +S + V GH + I +D +GR+ +S D+T +LWD+
Sbjct: 377 TGTEDRQIKLWD----LSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDV 431
Score = 126 (49.4 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 52/225 (23%), Positives = 91/225 (40%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQK-DIETKALRWTITDTSLSPD 96
G +Y+ FS++G F V+ S + ++++V+ I K +IE +T ++SP+
Sbjct: 400 GHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEIENG-----VTAIAISPN 454
Query: 97 QRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQ-- 154
+F+ S+ I+ + V + E L HK +S D + S +
Sbjct: 455 DQFIAVGSLDQIIRVWSVSGTLVERLEG---HKESVYSIAFSPDSSILLSGSLDKTIKVW 511
Query: 155 ELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRR 214
EL A S + C H V +V + ++ + SGS D + WD
Sbjct: 512 ELQATRSVGLSAIKP--EGICKATYTGHTDFVLSVAVSPDSRWGL-SGSKDRSMQFWD-- 566
Query: 215 CFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI 259
+ G++ GH + + DGR F S D ++W I
Sbjct: 567 --LQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIWSI 609
>RGD|1306947 [details] [associations]
symbol:Wdr83 "WD repeat domain 83" species:10116 "Rattus
norvegicus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0005681 "spliceosomal complex"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1306947 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013
GO:GO:0000375 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V EMBL:AY940050 IPI:IPI00209921
RefSeq:NP_001041312.1 UniGene:Rn.3570 ProteinModelPortal:Q5BLX8
PRIDE:Q5BLX8 GeneID:288924 KEGG:rno:288924 InParanoid:Q5BLX8
NextBio:629000 Genevestigator:Q5BLX8 Uniprot:Q5BLX8
Length = 315
Score = 143 (55.4 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 58/230 (25%), Positives = 96/230 (41%)
Query: 150 STDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCK 209
S D L + G D + ++D+ + + H VNTV F +E +I SGS DS +
Sbjct: 76 SFDNSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEAT-VILSGSIDSSVR 134
Query: 210 VWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSSNTTD- 268
WD C K L +GI+ + + ++ D + +D+R M T+D
Sbjct: 135 CWD--CRSRKPEPVQTLDEARDGISSV--KVSDHEILAGSVDGRVRRYDLR-MGQVTSDY 189
Query: 269 -NSRLRD--YDWDYRWM---EYPSYARRLKHPHDQSLATYKGHSVLRTLIRCYFSPEYST 322
S + + D + S R L + L Y GH + + C S E T
Sbjct: 190 VGSPITCTCFSRDGQCTLISSLDSTLRLLDKDTGELLGEYVGHKNQKYKLDCCLS-ERDT 248
Query: 323 AQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISS 372
++ + S D V+ +DLV G+ L + V+ +HP P L+++
Sbjct: 249 ---HVVSCSEDGKVFFWDLVEGSLALALPVGSNVVQSLAYHPADPCLLTA 295
Score = 38 (18.4 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 5/22 (22%), Positives = 14/22 (63%)
Query: 47 QFSNDGSFFVAASQESNIKVYN 68
+F+ DG++ + + +K++N
Sbjct: 32 RFNVDGNYCLTCGSDKTLKLWN 53
>UNIPROTKB|F1SM42 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0000421 "autophagic vacuole membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:FP102656 Ensembl:ENSSSCT00000017750 Uniprot:F1SM42
Length = 596
Score = 113 (44.8 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 38/162 (23%), Positives = 72/162 (44%)
Query: 102 YASICAIVNIVDVG-SSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAG 160
++S+ A + VD S++E VT D + DG+ + +V+FS + L G
Sbjct: 288 FSSVPAPQDNVDTHPGSSKEVRVPVTAVCVFD-AHDGE-----VNAVQFSPGSRLLATGG 341
Query: 161 SDNFIYVYDLQANKCSLR--IPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFIS 218
D + ++++ +KC + + + + ++ F D G + + S+D ++W +
Sbjct: 342 MDRRVKLWEVFGDKCEFKGSLSGSNAGITSIEF-DSAGSYLLAASNDFASRIWT----VD 396
Query: 219 KGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
R L GH + D +S D+T KLWD+R
Sbjct: 397 DYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLR 438
Score = 92 (37.4 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 30/117 (25%), Positives = 49/117 (41%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
+ S KF D +V+ D + ++DL++ C + A S + VC T + SG
Sbjct: 411 VLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVC----TEQCVMSGH 466
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
D + WD R + G L+G F R + +S +D K+ D+R
Sbjct: 467 FDKKIRFWDIRYNTRSLVSLGQLLGKQTASRFNPERTE---LLSCSRDDLLKIIDLR 520
Score = 80 (33.2 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 313 RCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKL--DFHNAPVRDCCWHP 364
R FSP+ S Y+ GS++ S+Y++ ++SG +V K+ H++P+ W P
Sbjct: 541 RVVFSPDGS----YVAAGSAEGSLYVWSVLSG-KVEKVLSKHHSSPINAVAWSP 589
Score = 57 (25.1 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 10/35 (28%), Positives = 22/35 (62%)
Query: 36 VDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVD 70
+ G N+ + + +F + GS+ +AAS + +++ VD
Sbjct: 362 LSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVD 396
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 140 (54.3 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 38/130 (29%), Positives = 68/130 (52%)
Query: 153 GQELVAAGSDNF-IYVYDLQANKCSL-RIPAHKSDVNTVCFADETGHLIFSGSDDSLCKV 210
G E + +GSD+F ++++ +K L R+ H++ +N V F+ ++ +I S S D K+
Sbjct: 341 GPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDS-RVIASASFDKSIKL 399
Query: 211 WDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR--KMSSNTTD 268
WD R G+ L GH+ + I D R +S D T K+WD++ K+S++
Sbjct: 400 WDGRT----GKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLSTDLPG 455
Query: 269 NS-RLRDYDW 277
++ + DW
Sbjct: 456 HADEVYAVDW 465
Score = 132 (51.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 33/114 (28%), Positives = 57/114 (50%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
I V FS D + + +A D I ++D + K + H + V + ++ ++ L+ SGS
Sbjct: 376 INQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADS-RLLVSGS 434
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
DS KVWD + + + L GH + + +D DG+ S GKD+ ++W
Sbjct: 435 SDSTLKVWD----VKAQKLSTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 484
Score = 105 (42.0 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 45/184 (24%), Positives = 77/184 (41%)
Query: 134 SADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFAD 193
S +G + + SV FS G+ L + D + +DL H+ V ++ ++
Sbjct: 110 SLEGHSE--AVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSP 167
Query: 194 ETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFID-----SRRDGRYFISN 248
+ G + SG + +WD GRA L GH + IT + + + RY S+
Sbjct: 168 D-GKKLASGCKNGQILLWDPSTGKQVGRA---LTGHSKWITALSWEPLHANPECRYVASS 223
Query: 249 GKDQTTKLWDIR--KMSSNTTDNSR-LRDYDWDYRWMEYP-SYARRLK--HPHDQSLA-T 301
KD + ++WD + T +++ + W + Y S R +K HD L T
Sbjct: 224 SKDGSVRVWDTTAGRCERTLTGHAQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRT 283
Query: 302 YKGH 305
+GH
Sbjct: 284 LQGH 287
Score = 86 (35.3 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 25/85 (29%), Positives = 40/85 (47%)
Query: 299 LATYKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVR 358
LA GH L + + FSP+ + I + S D S+ ++D +G +A L H A V
Sbjct: 366 LARMTGHQAL--INQVVFSPD----SRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVY 419
Query: 359 DCCWHPIYPMLISSSWDCNIVRWEI 383
W +L+S S D + W++
Sbjct: 420 QIAWSADSRLLVSGSSDSTLKVWDV 444
>UNIPROTKB|J9JHP3 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
Ensembl:ENSCAFT00000044849 Uniprot:J9JHP3
Length = 1215
Score = 110 (43.8 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 42/172 (24%), Positives = 74/172 (43%)
Query: 43 VYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQRFLVY 102
VY + FS DG + + ++V+ + K+ +E KA + + S D RF+
Sbjct: 626 VYHACFSEDGQRIASCGVDKTLQVFKAETGEKL---LEIKAHEDEVLCCAFSTDDRFI-- 680
Query: 103 ASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELV--AAG 160
+ C++ V + +S L +V DE + F+ + L+ A
Sbjct: 681 -ATCSVDKKVKIWNSMTGGLVHVY-----------DEHSEQVNCCHFTNNSHYLLLATAS 728
Query: 161 SDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWD 212
SD F+ ++DL +C + H + VN F+ + L+ S S D K+WD
Sbjct: 729 SDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDD-KLLASCSADGTLKLWD 779
Score = 90 (36.7 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 39/156 (25%), Positives = 67/156 (42%)
Query: 228 GHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSSNTTDNSRLRDYDWDYRWMEYPSY 287
GHL + + DG F+++ DQT +LW+ +K+ N+ + ++ D ++ E
Sbjct: 845 GHLSWVHCVMFSPDGSSFLTSSDDQTIRLWETKKVCKNSAIVLK-QEIDVVFQENEVMVL 903
Query: 288 A-RRLKHPHDQSLATYKGHSVLRTLIRCY-FSPEYSTAQKYIYTGSSDNSVYIYDLVSGA 345
A +K + T + ++ + C SP +YI G D +V I +L++
Sbjct: 904 AVDNIKRLQLINGKTGQIDYLIEAQVSCCCLSPHL----QYIAFGGEDGAVEILELLNNR 959
Query: 346 QVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRW 381
H VR + LISSS D +I W
Sbjct: 960 IFQSRIGHKKTVRHIQFTDDGKTLISSSDDSSIQVW 995
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 146 (56.5 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 56/234 (23%), Positives = 94/234 (40%)
Query: 156 LVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRC 215
L ++ D I ++D + C + H + V+ V + + G L++SGS D +VWD
Sbjct: 251 LASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQ-G-LLYSGSHDRTVRVWDIN- 307
Query: 216 FISKGRANGVLMGHLEGITFIDSRRDGRY----FISNGKDQTTKLWDIRKMSSNTTDNSR 271
S+GR +L H + + D F GK +T +K N +
Sbjct: 308 --SQGRCINILKSHAHWVNHLSLSTDYALRIGAFDHTGKKPSTPEEAQKKALENYEKICK 365
Query: 272 LRDYDWDYRWMEYPSYARRLKHP--HDQSLATYKGHSVLRTLIRCYFSPEYSTAQKYIYT 329
+ Y L +P + +A GH L + FSP+ +YI +
Sbjct: 366 KNGNSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVA--FSPD----GRYIVS 419
Query: 330 GSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWEI 383
S DNS+ ++D G ++ H A V W +L+S S D + W++
Sbjct: 420 ASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDV 473
Score = 137 (53.3 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 38/135 (28%), Positives = 69/135 (51%)
Query: 148 KFSTDGQELVAAGSDNF-IYVYD-LQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDD 205
K + + +E++ SD++ +++++ L++ K R+ H+ VN V F+ + G I S S D
Sbjct: 365 KKNGNSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPD-GRYIVSASFD 423
Query: 206 SLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR--KMS 263
+ K+WD R G+ GH+ + + D R +S KD T K+WD+R K+S
Sbjct: 424 NSIKLWDGR----DGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKLS 479
Query: 264 SNTTDNS-RLRDYDW 277
+ + + DW
Sbjct: 480 VDLPGHKDEVYTVDW 494
Score = 133 (51.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 38/112 (33%), Positives = 56/112 (50%)
Query: 147 VKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDS 206
V FS DG+ +V+A DN I ++D + K H + V V ++ + L+ S S D+
Sbjct: 408 VAFSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDC-RLLVSCSKDT 466
Query: 207 LCKVWDRRCFISKGRANGV-LMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
KVWD R R V L GH + + +D DG+ S GKD+ +LW
Sbjct: 467 TLKVWDVRT-----RKLSVDLPGHKDEVYTVDWSVDGKRVCSGGKDKMVRLW 513
Score = 122 (48.0 bits), Expect = 0.00021, P = 0.00021
Identities = 54/252 (21%), Positives = 104/252 (41%)
Query: 144 IFSVKFSTDGQELVAAGS-DNFIYVYDLQANKC-SLRIPAHKSDVNTVCFADETGHLIFS 201
+ V +S DG E++A GS DN I ++D ++ +C + H + ++ + E HL+
Sbjct: 189 VLCVSWSPDG-EVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSW--EPIHLVKP 245
Query: 202 GSD--------DSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQT 253
GS D K+WD +S+ + GH ++ + G + S D+T
Sbjct: 246 GSKPRLASSSKDGTIKIWDT---VSRV-CQYTMSGHTNSVSCVKWGGQGLLY-SGSHDRT 300
Query: 254 TKLWDIRKMSSNTTDNSRLRDYDWDYRWMEYPSYARRLKHPHDQSLATYKGHSVLRTLIR 313
++WDI S N W YA R+ + +
Sbjct: 301 VRVWDIN--SQGRCINILKSHAHWVNHLSLSTDYALRIGAFDHTGKKPSTPEEAQKKALE 358
Query: 314 CY--FSPEYSTAQKYIYTGSSDNSVYIYD-LVSGAQVAKLDFHNAPVRDCCWHPIYPMLI 370
Y + +++ + T S D ++++++ L S +A++ H V + P ++
Sbjct: 359 NYEKICKKNGNSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIV 418
Query: 371 SSSWDCNIVRWE 382
S+S+D +I W+
Sbjct: 419 SASFDNSIKLWD 430
>MGI|MGI:1329037 [details] [associations]
symbol:Strap "serine/threonine kinase receptor associated
protein" species:10090 "Mus musculus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005102 "receptor binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016301
"kinase activity" evidence=IEA] [GO:0016310 "phosphorylation"
evidence=IEA] [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1329037 EMBL:AF096285 GO:GO:0005829 GO:GO:0005739
GO:GO:0005886 GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030054 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005102
GO:GO:0005681 GO:GO:0000122 GO:GO:0030512
GeneTree:ENSGT00630000089849 CTD:11171 HOGENOM:HOG000174258
HOVERGEN:HBG055228 KO:K13137 OMA:LWQTTVG OrthoDB:EOG4CRM0M
ChiTaRS:STRAP EMBL:AK075804 EMBL:AK077504 EMBL:AK145971
EMBL:AK152283 IPI:IPI00918973 RefSeq:NP_035629.2 UniGene:Mm.22584
ProteinModelPortal:Q9Z1Z2 SMR:Q9Z1Z2 STRING:Q9Z1Z2
PhosphoSite:Q9Z1Z2 REPRODUCTION-2DPAGE:IPI00130670
REPRODUCTION-2DPAGE:Q9Z1Z2 PaxDb:Q9Z1Z2 PRIDE:Q9Z1Z2
Ensembl:ENSMUST00000064910 GeneID:20901 KEGG:mmu:20901
NextBio:299765 Bgee:Q9Z1Z2 Genevestigator:Q9Z1Z2
GermOnline:ENSMUSG00000030224 Uniprot:Q9Z1Z2
Length = 350
Score = 143 (55.4 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 56/243 (23%), Positives = 98/243 (40%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
++ + D + A +D V+D + L AHK V TV F ++ +L+ +G
Sbjct: 62 VWGATLNKDATKAATAAADFTAKVWDAVSGD-ELMTLAHKHIVKTVDFTQDSNYLL-TGG 119
Query: 204 DDSLCKVWDRRCFISKGRANGV-LMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKM 262
D L +++D ++K A + GH GI D + +S D+T +LWD M
Sbjct: 120 QDKLLRIYD----LNKPEAEPKEISGHTSGIKKALWCSDDKQILS-ADDKTVRLWDHATM 174
Query: 263 SSNTTDNSRLRDYDWDY---RWMEYPSYARRLKHPHDQSLATYKGHSVLRTLIRCYFSPE 319
+ + N + +Y + +Y R + SL K T+ PE
Sbjct: 175 TEVKSLNFNMSVSSMEYIPEGEILVITYGRSIAFHSAVSLEPIKSFEAPATINSASLHPE 234
Query: 320 YSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIV 379
++++ G D +Y YD SG ++ H P+ + P + S S D +
Sbjct: 235 ----KEFLVAGGEDFKLYKYDYNSGEELESYKGHFGPIHCVRFSPDGELYASGSEDGTLR 290
Query: 380 RWE 382
W+
Sbjct: 291 LWQ 293
>UNIPROTKB|F1SEX9 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 KO:K13124 OMA:CKQGAVR
EMBL:CU856041 RefSeq:XP_003123369.1 Ensembl:ENSSSCT00000014996
GeneID:100519823 KEGG:ssc:100519823 Uniprot:F1SEX9
Length = 311
Score = 142 (55.0 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 58/230 (25%), Positives = 92/230 (40%)
Query: 150 STDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCK 209
S D L + G D + ++D+ + + + H VNTV F +E +I SGS DS +
Sbjct: 76 SFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEAT-VILSGSIDSSVR 134
Query: 210 VWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRK-------M 262
WD C K L +GI+ + + ++ D + +D+R +
Sbjct: 135 CWD--CRSRKPEPVQTLDEARDGISSV--KVSDHEVLAGSVDGRVRRYDLRMGQLFSDYV 190
Query: 263 SSNTTDNSRLRDYDWDYRWMEYPSYARRLKHPHDQSLATYKGHSVLRTLIRCYFSPEYST 322
S T RD S R L + L Y GH + C S E T
Sbjct: 191 GSPITCTCFSRDGQCTLV-SSLDSTLRLLDKDTGELLGEYTGHKNQEYKLDCCLS-ERDT 248
Query: 323 AQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISS 372
++ + S D V+ +DLV G V L + V+ +HP P L+++
Sbjct: 249 ---HVVSCSEDGKVFFWDLVEGVLVLALPVGPSVVQSLAYHPTEPCLLTA 295
Score = 38 (18.4 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 5/22 (22%), Positives = 14/22 (63%)
Query: 47 QFSNDGSFFVAASQESNIKVYN 68
+F+ DG++ + + +K++N
Sbjct: 32 RFNVDGNYCLTCGSDKTLKLWN 53
>SGD|S000001885 [details] [associations]
symbol:CDC4 "F-box protein required for G1/S and G2/M
transition" species:4932 "Saccharomyces cerevisiae" [GO:0000086
"G2/M transition of mitotic cell cycle" evidence=IGI;IMP]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043224 "nuclear SCF
ubiquitin ligase complex" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA;IPI]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IDA] [GO:0007126 "meiosis" evidence=IMP] [GO:0051301 "cell
division" evidence=IEA] [GO:0030435 "sporulation resulting in
formation of a cellular spore" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 SGD:S000001885 GO:GO:0007126 GO:GO:0000086
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0000082 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:D50617 EMBL:BK006940
SUPFAM:SSF81383 GO:GO:0030435 GO:GO:0016363 GO:GO:0042787
GO:GO:0043130 EMBL:Z46255 GeneTree:ENSGT00550000075528
GO:GO:0031146 EMBL:X05625 PIR:S56245 RefSeq:NP_116585.1 PDB:1NEX
PDB:2P63 PDB:3MKS PDB:3V7D PDBsum:1NEX PDBsum:2P63 PDBsum:3MKS
PDBsum:3V7D ProteinModelPortal:P07834 SMR:P07834 DIP:DIP-1625N
IntAct:P07834 MINT:MINT-389524 STRING:P07834 PaxDb:P07834
PRIDE:P07834 EnsemblFungi:YFL009W GeneID:850539 KEGG:sce:YFL009W
CYGD:YFL009w HOGENOM:HOG000111495 KO:K03361 OMA:VVTCLQH
OrthoDB:EOG4B2X5M EvolutionaryTrace:P07834 NextBio:966298
Genevestigator:P07834 GermOnline:YFL009W GO:GO:0043224
Uniprot:P07834
Length = 779
Score = 148 (57.2 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 53/194 (27%), Positives = 83/194 (42%)
Query: 156 LVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRC 215
++ D I VYD K L++ H V + +A G ++ SGS D +VWD
Sbjct: 395 VITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAH--GGILVSGSTDRTVRVWD--- 449
Query: 216 FISKGRANGVLMGHLEGITFID--SRRDGRYFISNGKDQTTKLWDIRKMSSNTTDNSRLR 273
I KG V GH + +D ++ +Y ++ +D T +W + K SS D+
Sbjct: 450 -IKKGCCTHVFKGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESS-VPDHGEEH 507
Query: 274 DYDWDYRWMEYPSYARRLKHPHDQSLATYKGHSVLRTLIRCYFSP--EYSTAQK---YIY 328
DY + E Y + H S+ T GH + + Y + + AQ YI
Sbjct: 508 DYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNI-VVSGSYDNTLIVWDVAQMKCLYIL 566
Query: 329 TGSSDNSVY--IYD 340
+G +D +Y IYD
Sbjct: 567 SGHTDR-IYSTIYD 579
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 144 (55.7 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 59/236 (25%), Positives = 108/236 (45%)
Query: 156 LVAAGS-DNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRR 214
+VA GS D ++D+Q+ + + + H +++ ++ F D +G I +GS D VWD
Sbjct: 191 VVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSF-DTSGDRIITGSFDHTVVVWDA- 248
Query: 215 CFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRK---MSSNTTDNSR 271
S GR L+GH I+ D ++ D+T LWD +++ T +
Sbjct: 249 ---STGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDE 305
Query: 272 LRDYDWDY--RWMEYPSY---ARRLKHPHDQSLATYKGHSVLRTLIRCYFSPEYSTAQKY 326
+ D +DY + + S AR + + +GH + + F+P+ +
Sbjct: 306 ILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHE--GEISKISFNPQGNR---- 359
Query: 327 IYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWD--CNIVR 380
+ TGSSD + I+D+ +G + L+ H + C ++ ++I+ S D C I R
Sbjct: 360 LLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIWR 415
Score = 144 (55.7 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 54/249 (21%), Positives = 104/249 (41%)
Query: 144 IFSVKFSTDGQELVAAGS-DNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSG 202
++++ F+ + +A GS D ++ + KC H +++ + F ++ ++ +G
Sbjct: 137 VYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQST-VVATG 195
Query: 203 SDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI--- 259
S D+ K+WD I G L GHL I + G I+ D T +WD
Sbjct: 196 SMDTTAKLWD----IQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTG 251
Query: 260 RKMSSNTTDNSRLRD--YDWDYRWMEYPSYARRLK---HPHDQSLATYKGHSVLRTLIRC 314
RK+ + + + + WD + S + + +AT GH L C
Sbjct: 252 RKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDD-EILDSC 310
Query: 315 YFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSW 374
+ +Y+ K I T S+D + +Y+ + + KL+ H + ++P L++ S
Sbjct: 311 F---DYTG--KLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSS 365
Query: 375 DCNIVRWEI 383
D W++
Sbjct: 366 DKTARIWDV 374
Score = 137 (53.3 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 31/121 (25%), Positives = 56/121 (46%)
Query: 137 GDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETG 196
G +DE I F G+ + A +D VY+ KC ++ H+ +++ + F + G
Sbjct: 301 GHDDE--ILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQ-G 357
Query: 197 HLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKL 256
+ + +GS D ++WD + G+ VL GH + I G I+ KD + ++
Sbjct: 358 NRLLTGSSDKTARIWD----VQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRI 413
Query: 257 W 257
W
Sbjct: 414 W 414
Score = 137 (53.3 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 53/236 (22%), Positives = 91/236 (38%)
Query: 146 SVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDD 205
+V + G + D V+D + + + H++ V + F + G I +GS D
Sbjct: 97 NVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFD 156
Query: 206 SLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSSN 265
CK+W G+ GH I + + D T KLWDI+
Sbjct: 157 KTCKLWSAET----GKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEV 212
Query: 266 TTDNSRLRDYDWDYRWMEYPSYARRL-KHPHDQSLATYKGHS--VLRTLI-RC--YFSPE 319
T L + + + + R+ D ++ + + + TLI C S
Sbjct: 213 VTLTGHLAEIIS----LSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSAL 268
Query: 320 YSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWD 375
+S I TGS D + ++D SG VA L H+ + D C+ ++ ++S D
Sbjct: 269 FSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASAD 324
>UNIPROTKB|B4KTK4 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7230 "Drosophila mojavensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH933808 OrthoDB:EOG45DV4X RefSeq:XP_002005652.1
ProteinModelPortal:B4KTK4 EnsemblMetazoa:FBtr0169681 GeneID:6579773
KEGG:dmo:Dmoj_GI18956 FlyBase:FBgn0141695 InParanoid:B4KTK4
Uniprot:B4KTK4
Length = 331
Score = 142 (55.0 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 52/225 (23%), Positives = 93/225 (41%)
Query: 36 VDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSP 95
+ G R++ + G+ F + ++ I+++++ N K I + + TI + SP
Sbjct: 10 LQGHKGRIWGVAWHPKGNSFASCGEDKAIRIWSLSGNTWTTKTILSDGHKRTIREVRWSP 69
Query: 96 DQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQE 155
+L AS A I S E A + +G E+E + SV +S G
Sbjct: 70 CGEYLASASFDATTAIW----SKHECTATL----------EGHENE--VKSVSWSRSGGL 113
Query: 156 LVAAGSDNFIYVYDLQAN---KCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWD 212
L D ++++++ + +C+ + AH DV V + T ++ S S D+ K++
Sbjct: 114 LATCSRDKSVWIWEVAGDDEFECAAVLNAHSQDVKRVVW-HPTKEILASASYDNTIKMYA 172
Query: 213 RRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
S L H + ID DG +S D T K+W
Sbjct: 173 ESALDSDWDCTATLSSHTSTVWSIDFDADGERLVSCSDDATLKIW 217
>DICTYBASE|DDB_G0293070 [details] [associations]
symbol:DDB_G0293070 "TROVE domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005697 "telomerase holoenzyme complex"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320
dictyBase:DDB_G0293070 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 EMBL:AAFI02000199
GO:GO:0005697 KO:K11127 InterPro:IPR025139 Pfam:PF13271
RefSeq:XP_629304.1 ProteinModelPortal:Q54CB5 PRIDE:Q54CB5
EnsemblProtists:DDB0237515 GeneID:8629027 KEGG:ddi:DDB_G0293070
InParanoid:Q54CB5 OMA:LPSDWIE ProtClustDB:CLSZ2429313
Uniprot:Q54CB5
Length = 2430
Score = 153 (58.9 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 85/360 (23%), Positives = 145/360 (40%)
Query: 36 VDGMNSR-VYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLS 94
V G +S+ V SNDG++ V S ++ KV++ ++ + W + S
Sbjct: 1735 VMGNHSKSVNHCSLSNDGNYIVTGSDDATAKVWSSTLGTQLTNFLIPGDC-WA-NCLAFS 1792
Query: 95 PDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQ 154
P Q L + V + DV S+ TI++ + G I S+ FS G
Sbjct: 1793 PTQPLLAVGATDCTVRLFDVSSN--------TIYREVA-KLHGHTR--AITSITFSPSGN 1841
Query: 155 ELVAAGSDNFIYVYDLQANKCSLRIP-AHKSDVNTVCFADETGHLIFSGSDDSLCKVWDR 213
+ + D I V+++Q +K I AH +N + F + S SDD KVW R
Sbjct: 1842 LIASTSEDLLIKVWNVQTHKAEYTIEKAHNDPINCISFNPTNECELISCSDDYSTKVWSR 1901
Query: 214 ----RCFISKGRANGV--LMGHLEGITFIDSRRDGRY--FISNGKDQTTKL---WDIRKM 262
++G N + + +G RD ++ + K +L D
Sbjct: 1902 FTTSTTLSTEGSTNTIKHCVYSPDGKYIATVSRDCSIAVYLCSSKKLLFRLKGHTDWVNF 1961
Query: 263 SSNTTDNSRLRDYDWDYRWMEYPSYARRLKHPHDQSLATYKGHSVLRTLIRCYFSPEYST 322
+ + D+ +L WD+ + +K + L KGHS ++ + +F+ +
Sbjct: 1962 CTFSPDSKKLVSGGWDFNLRVW-----NIKT--QKELLCLKGHS--SSIEKAFFTKD--- 2009
Query: 323 AQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVR-W 381
QKYI + S D SV ++D G+++ L H + D I SS D I++ W
Sbjct: 2010 -QKYIISASFDGSVKVWDAQFGSEITSLR-HQTRISDVVSSSDASGRIFSSSDDGIIKSW 2067
Score = 128 (50.1 bits), Expect = 0.00030, P = 0.00030
Identities = 84/354 (23%), Positives = 135/354 (38%)
Query: 48 FSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQRFLVYASI-- 105
+S DG+ ++S + IK++N I KD L+ I D SLS Y SI
Sbjct: 1658 WSPDGTLIASSSWDGTIKIWNPFDT--IAKD----RLKHVI-DASLS-------YGSIKS 1703
Query: 106 CAI-VNIVDV-GSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGSDN 163
C N + ++ + + ++ S G+ + + S DG +V D
Sbjct: 1704 CKFSANSKQILATTMKNDVLLFDVNSQKLISVMGNHSK-SVNHCSLSNDGNYIVTGSDDA 1762
Query: 164 FIYVYD--LQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKG- 220
V+ L + IP N + F+ T L+ G+ D +++D +S
Sbjct: 1763 TAKVWSSTLGTQLTNFLIPGD-CWANCLAFSP-TQPLLAVGATDCTVRLFD----VSSNT 1816
Query: 221 --RANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSSNTT----DNSRLRD 274
R L GH IT I G S +D K+W+++ + T N +
Sbjct: 1817 IYREVAKLHGHTRAITSITFSPSGNLIASTSEDLLIKVWNVQTHKAEYTIEKAHNDPINC 1876
Query: 275 YDWD-YRWMEYPS----YARRLKHPHDQSLATYKGHSVLRTLIRCYFSPEYSTAQKYIYT 329
++ E S Y+ ++ S T T+ C +SP+ KYI T
Sbjct: 1877 ISFNPTNECELISCSDDYSTKVWSRFTTS-TTLSTEGSTNTIKHCVYSPD----GKYIAT 1931
Query: 330 GSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRWEI 383
S D S+ +Y S + +L H V C + P L+S WD N+ W I
Sbjct: 1932 VSRDCSIAVYLCSSKKLLFRLKGHTDWVNFCTFSPDSKKLVSGGWDFNLRVWNI 1985
Score = 113 (44.8 bits), Expect = 4.4e-05, Sum P(4) = 4.4e-05
Identities = 29/83 (34%), Positives = 44/83 (53%)
Query: 302 YKGHSVLRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDF---HNAPVR 358
+K HS R + C FSP TA + + + D+S+ I++ S + + +F H+ PV
Sbjct: 1602 FKDHS--RAVNYCEFSP---TANNLLMSCAWDSSIIIFN-TSDKNIFR-NFRSAHSKPVN 1654
Query: 359 DCCWHPIYPMLISSSWDCNIVRW 381
CCW P ++ SSSWD I W
Sbjct: 1655 SCCWSPDGTLIASSSWDGTIKIW 1677
Score = 76 (31.8 bits), Expect = 4.4e-05, Sum P(4) = 4.4e-05
Identities = 25/93 (26%), Positives = 37/93 (39%)
Query: 185 DVNTVCFADETGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRY 244
D T C G +I S DS+ ++ S G L+GH I+ DG+
Sbjct: 1523 DGATACCYSRDGSMIASAGKDSIIHIFKA----SNGSELLTLVGHSNWISCFSFSDDGKT 1578
Query: 245 FISNGKDQTTKLWD--IRKMSSNTTDNSRLRDY 275
S+ D T +WD + D+SR +Y
Sbjct: 1579 LASSSWDNTVIVWDLIVGNQIHQFKDHSRAVNY 1611
Score = 42 (19.8 bits), Expect = 4.4e-05, Sum P(4) = 4.4e-05
Identities = 12/36 (33%), Positives = 15/36 (41%)
Query: 152 DGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVN 187
D LV D F D AN + + +KSD N
Sbjct: 1165 DRHSLVLGKFDEFRKKLDESANNNQMSLLLNKSDAN 1200
Score = 42 (19.8 bits), Expect = 4.4e-05, Sum P(4) = 4.4e-05
Identities = 16/55 (29%), Positives = 29/55 (52%)
Query: 43 VYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETK-ALRWTITDTSLSPD 96
VY S FS F+A S+ ++ ++K +I++ E K ++ T T T+ + D
Sbjct: 620 VYISGFSESILKFIAERGGSDQQLQYIEKIDEIKRIPELKKSITSTATTTTNTQD 674
>UNIPROTKB|B3KVK2 [details] [associations]
symbol:GNB1 "cDNA FLJ16663 fis, clone THYMU2005759, highly
similar to Guanine nucleotide-binding proteinG(I)/G(S)/G(T) subunit
beta 1" species:9606 "Homo sapiens" [GO:0001917 "photoreceptor
inner segment" evidence=IEA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IEA] [GO:0007200 "phospholipase C-activating
G-protein coupled receptor signaling pathway" evidence=IEA]
[GO:0007204 "elevation of cytosolic calcium ion concentration"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0010659 "cardiac muscle cell apoptotic process" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0042622 "photoreceptor
outer segment membrane" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 GO:GO:0001750
EMBL:AL109917 EMBL:AL031282 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 UniGene:Hs.430425 HGNC:HGNC:4396 ChiTaRS:GNB1
EMBL:AK122949 IPI:IPI00642117 ProteinModelPortal:B3KVK2 SMR:B3KVK2
STRING:B3KVK2 PRIDE:B3KVK2 Ensembl:ENST00000455156
OrthoDB:EOG4GHZR3 ArrayExpress:B3KVK2 Bgee:B3KVK2 Uniprot:B3KVK2
Length = 240
Score = 138 (53.6 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 53/246 (21%), Positives = 99/246 (40%)
Query: 149 FSTDGQELVAAGSDNFIYVYDLQANKCSLRIP----AHKSDVNTVCFADETGHLIFSGSD 204
++ G + G DN +Y+L+ + ++R+ H ++ F D+ + I + S
Sbjct: 5 YAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDD--NQIVTSSG 62
Query: 205 DSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSS 264
D+ C +WD I G+ GH + + D R F+S D + KLWD+R+
Sbjct: 63 DTTCALWD----IETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMC 118
Query: 265 NTTDNSRLRDYDWDYRWMEYPSYA--------RRLKHPHDQSLATYKGHSVLRTLIRCYF 316
T D + + ++A R DQ L TY +++ +
Sbjct: 119 RQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGIT---- 174
Query: 317 SPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISS-SWD 375
S +S + + + G D + ++D + + L H+ V C M +++ SWD
Sbjct: 175 SVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRV-SCLGVTDDGMAVATGSWD 233
Query: 376 CNIVRW 381
+ W
Sbjct: 234 SFLKIW 239
Score = 127 (49.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/121 (24%), Positives = 56/121 (46%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
+ S+ + D + V+ D ++D++ C H+SD+N +CF G+ +GS
Sbjct: 87 VMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPN-GNAFATGS 145
Query: 204 DDSLCKVWDRRC---FISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
DD+ C+++D R ++ N + GIT + + GR ++ D +WD
Sbjct: 146 DDATCRLFDLRADQELMTYSHDNIIC-----GITSVSFSKSGRLLLAGYDDFNCNVWDAL 200
Query: 261 K 261
K
Sbjct: 201 K 201
Score = 111 (44.1 bits), Expect = 0.00083, P = 0.00083
Identities = 33/121 (27%), Positives = 57/121 (47%)
Query: 141 EFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKS---DVNTVCFADETGH 197
E I ++ F +G D ++DL+A++ L +H + + +V F+ ++G
Sbjct: 126 ESDINAICFFPNGNAFATGSDDATCRLFDLRADQ-ELMTYSHDNIICGITSVSFS-KSGR 183
Query: 198 LIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
L+ +G DD C VWD + RA GVL GH ++ + DG + D K+W
Sbjct: 184 LLLAGYDDFNCNVWDA---LKADRA-GVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 239
Query: 258 D 258
+
Sbjct: 240 N 240
>TAIR|locus:2027749 [details] [associations]
symbol:SMU1 "AT1G73720" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002684 GO:GO:0005634 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 GO:GO:0080008
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 KO:K13111
OMA:NGHWDTV EMBL:AF462796 EMBL:AY102129 IPI:IPI00544131
RefSeq:NP_177513.2 UniGene:At.27865 ProteinModelPortal:Q8W117
SMR:Q8W117 IntAct:Q8W117 PaxDb:Q8W117 PRIDE:Q8W117
EnsemblPlants:AT1G73720.1 GeneID:843707 KEGG:ath:AT1G73720
TAIR:At1g73720 InParanoid:Q8W117 PhylomeDB:Q8W117
ProtClustDB:CLSN2690492 Genevestigator:Q8W117 Uniprot:Q8W117
Length = 511
Score = 124 (48.7 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 44/178 (24%), Positives = 72/178 (40%)
Query: 94 SPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGD---EDEFGIFSVKFS 150
SPD +FL +S+ + + D S + K L + AD D+ + + FS
Sbjct: 222 SPDGQFLASSSVDGFIEVWDYISGK--------LKKDLQYQADESFMMHDD-PVLCIDFS 272
Query: 151 TDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKV 210
D + L + D I ++ ++ C R AH V ++ F+ + G + S S D ++
Sbjct: 273 RDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRD-GSQLLSTSFDQTARI 331
Query: 211 WDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSSNTTD 268
+ G+ GH + DG I+ D T K+WD S TTD
Sbjct: 332 HG----LKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWD-----SKTTD 380
Score = 124 (48.7 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 44/182 (24%), Positives = 81/182 (44%)
Query: 38 GMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSLSPDQ 97
G S ++FS DG F ++S + I+V++ K++KD++ +A D+
Sbjct: 211 GKKSHAECARFSPDGQFLASSSVDGFIEVWDYISG-KLKKDLQYQA------------DE 257
Query: 98 RFLVYASICAIVNIV-D---VGSSARESLANV-TIHKGLDFSADGDEDEFGIFSVKFSTD 152
F+++ ++ D + S +++ + I G+ D G+ S+ FS D
Sbjct: 258 SFMMHDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRF-DAHSQGVTSLSFSRD 316
Query: 153 GQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWD 212
G +L++ D ++ L++ K H S VN F + G I + S D KVWD
Sbjct: 317 GSQLLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSD-GSRIITASSDCTVKVWD 375
Query: 213 RR 214
+
Sbjct: 376 SK 377
Score = 122 (48.0 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 47/186 (25%), Positives = 79/186 (42%)
Query: 82 KALRWTITDTSLSPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDE 141
+AL+W L P +F ++ A+ V+ ++ NV H + F +
Sbjct: 166 QALKWQQHQGLLPPGTQFDLFRGTAAMKQDVE------DTHPNVLTHT-IKFGKKSHAE- 217
Query: 142 FGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCS--LRIPAHKS----DVNTVCFA-DE 194
+FS DGQ L ++ D FI V+D + K L+ A +S D +C
Sbjct: 218 ----CARFSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSR 273
Query: 195 TGHLIFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTT 254
++ SGS D K+W R + R + H +G+T + RDG +S DQT
Sbjct: 274 DSEMLASGSQDGKIKIWRIRTGVCIRRFDA----HSQGVTSLSFSRDGSQLLSTSFDQTA 329
Query: 255 KLWDIR 260
++ ++
Sbjct: 330 RIHGLK 335
Score = 65 (27.9 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 17/62 (27%), Positives = 26/62 (41%)
Query: 321 STAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVR 380
ST +IY D +Y ++ SG + H V HP +L + S DC +
Sbjct: 449 STKGDWIYCIGEDKKLYCFNYQSGGLEHFMMVHEKDVIGITHHPHRNLLATYSEDCTMKL 508
Query: 381 WE 382
W+
Sbjct: 509 WK 510
Score = 39 (18.8 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 7/10 (70%), Positives = 7/10 (70%)
Query: 293 HPHDQSLATY 302
HPH LATY
Sbjct: 491 HPHRNLLATY 500
>UNIPROTKB|Q5BIM8 [details] [associations]
symbol:ERCC8 "DNA excision repair protein ERCC-8"
species:9913 "Bos taurus" [GO:0009411 "response to UV"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0051865 "protein autoubiquitination" evidence=ISS] [GO:0045739
"positive regulation of DNA repair" evidence=ISS] [GO:0032403
"protein complex binding" evidence=ISS] [GO:0006979 "response to
oxidative stress" evidence=ISS] [GO:0006289 "nucleotide-excision
repair" evidence=ISS] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=ISS] [GO:0000209 "protein
polyubiquitination" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031464 "Cul4A-RING ubiquitin ligase complex" evidence=IEA]
[GO:0016363 "nuclear matrix" evidence=IEA] [GO:0010165 "response to
X-ray" evidence=IEA] [GO:0000109 "nucleotide-excision repair
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0009411 GO:GO:0043234
GO:GO:0006979 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0032403 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004842 GO:GO:0016363
GO:GO:0000209 GO:GO:0010165 GO:GO:0045739 GO:GO:0051865
GO:GO:0006283 HOGENOM:HOG000248233 KO:K10570 GO:GO:0031464
GO:GO:0000109 EMBL:BT021196 IPI:IPI00699947 RefSeq:NP_001103651.1
UniGene:Bt.33395 ProteinModelPortal:Q5BIM8 STRING:Q5BIM8
Ensembl:ENSBTAT00000028792 GeneID:518857 KEGG:bta:518857 CTD:1161
GeneTree:ENSGT00390000009065 HOVERGEN:HBG005409 OMA:TMLRGHY
NextBio:20872751 Uniprot:Q5BIM8
Length = 397
Score = 98 (39.6 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 35/130 (26%), Positives = 60/130 (46%)
Query: 156 LVAAGSDN-FIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWD-R 213
LVA G+ + + DL++ CS + H+ ++ V ++ +++ + S DS K+WD R
Sbjct: 158 LVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYEYILATASADSRAKLWDVR 217
Query: 214 R---CFIS----KGR-------ANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI 259
R C I+ G+ AN G + G+ F DG + ++ G D +LW+
Sbjct: 218 RASGCLITLDQHNGKKSQAAESANTAHNGKVNGLCFTS---DGLHLLTVGTDNRMRLWNS 274
Query: 260 RKMSSNTTDN 269
NT N
Sbjct: 275 SN-GENTLVN 283
Score = 90 (36.7 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 334 NSVYIYDLVSGAQVAKLDFHNAPVRDCC-WHPIYPMLISSSWDCNIVRWEIPGIGEA 389
+++ +Y + SG Q+ L H V DCC + + L S S DCNI+ W +P + E+
Sbjct: 314 STIAVYTIYSGEQITMLKGHYKSV-DCCVFQSNFQELYSGSRDCNILAW-VPSLCES 368
Score = 71 (30.1 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 26/75 (34%), Positives = 38/75 (50%)
Query: 152 DGQELVAAGSDNFIYVYDLQANK----------CSL-RI-P-AHKSDVNTV-CFADETGH 197
+G+ +++ GSD I +YDL+ + CS+ R P HK V TV + +TG
Sbjct: 55 EGRYMLSGGSDGVIVLYDLENSSRQPYYTCKAVCSVGRSHPDVHKYSVETVQWYPHDTG- 113
Query: 198 LIFSGSDDSLCKVWD 212
+ S S D KVWD
Sbjct: 114 MFTSSSFDKTLKVWD 128
>UNIPROTKB|F1NNQ9 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0071001 "U4/U6 snRNP" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AADN02026938
EMBL:AADN02026937 IPI:IPI00576508 Ensembl:ENSGALT00000014388
Uniprot:F1NNQ9
Length = 521
Score = 145 (56.1 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 35/114 (30%), Positives = 56/114 (49%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
I+ + FS +G + DN V+DL+ KC IPAH++ V V F G+ + +G+
Sbjct: 409 IYGLNFSPNGYHVATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEPNHGNFLLTGA 468
Query: 204 DDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
D+ K+W + S + L GH + +D DG+ + D+T KLW
Sbjct: 469 YDNTAKIWTHPGW-SPLKT---LAGHEGKVMGLDISLDGQLIATCSYDRTFKLW 518
Score = 142 (55.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 32/118 (27%), Positives = 58/118 (49%)
Query: 143 GIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSG 202
G++ + F TDG G D F V+DL+ +C + + H ++ + F+ G+ + +G
Sbjct: 366 GVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGLNFSPN-GYHVATG 424
Query: 203 SDDSLCKVWD---RRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLW 257
S D+ CKVWD R+C + ++ G + F + G + ++ D T K+W
Sbjct: 425 SGDNTCKVWDLRQRKCIYTIPAHQNLVTG----VKFEPNH--GNFLLTGAYDNTAKIW 476
>UNIPROTKB|J9NS21 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
RefSeq:XP_003432082.1 ProteinModelPortal:J9NS21
Ensembl:ENSCAFT00000049144 GeneID:482620 KEGG:cfa:482620
Uniprot:J9NS21
Length = 1250
Score = 152 (58.6 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 78/352 (22%), Positives = 141/352 (40%)
Query: 37 DGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKI-QKDIETKALRWT--ITDTSL 93
D + +V F+N+ + + A+ S+ + K W + QK+ T +
Sbjct: 697 DEHSEQVNCCHFTNNSHYLLLATASSDCFL----KLWDLNQKECRNTMFGHTNSVNHCRF 752
Query: 94 SPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDED-EFGIFSVKFSTD 152
SPD + L S + + DV SA E ++ + + S + ED E + +S D
Sbjct: 753 SPDDKLLASCSADGTLKLWDV-KSANER-KSINVKQFFLNSEEPQEDMEVIVKCCSWSAD 810
Query: 153 GQELVAAGSDNFIYVYDLQANKCSLRI-PAHKSDVNTVCFADETGHLIFSGSDDSLCKVW 211
G ++ A N I+++D+ I H S + F+ + HL ++W
Sbjct: 811 GTRIMVAAK-NKIFLFDIHTGGLLAEIHTGHHSTIQYCDFSPQN-HLAVVALSQCCVELW 868
Query: 212 DRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSSNTTDNSR 271
+ + G HL + + DG F+++ DQT +LW+ +K+ N+ +
Sbjct: 869 NMDSCLKVADCRG----HLSWVHCVMFSPDGSSFLTSSDDQTIRLWETKKVCKNSAIVLK 924
Query: 272 LRDYDWDYRWMEYPSYA-RRLKHPHDQSLATYKGHSVLRTLIRCY-FSPEYSTAQKYIYT 329
++ D ++ E A +K + T + ++ + C SP +YI
Sbjct: 925 -QEIDVVFQENEVMVLAVDNIKRLQLINGKTGQIDYLIEAQVSCCCLSPHL----QYIAF 979
Query: 330 GSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIVRW 381
G D +V I +L++ H VR + LISSS D +I W
Sbjct: 980 GGEDGAVEILELLNNRIFQSRIGHKKTVRHIQFTDDGKTLISSSDDSSIQVW 1031
Score = 44 (20.5 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 8/34 (23%), Positives = 14/34 (41%)
Query: 35 KVDGMNSRVYTSQFSNDGSFFVAASQESNIKVYN 68
++ V FS D F S + +K++N
Sbjct: 653 EIKAHEDEVLCCAFSTDDRFIATCSVDKKVKIWN 686
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 147 (56.8 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 61/244 (25%), Positives = 104/244 (42%)
Query: 151 TDGQELVAAG-SDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCK 209
TD L+A G +D+ + V+ + K LR SD++ LI SDD L +
Sbjct: 480 TDDSSLIAGGFADSTVRVWSVTPKK--LRSVKQASDLS----------LIDKESDDVLER 527
Query: 210 VWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSSNTTDN 269
+ D + S+ + +L GH + D Y +S+ +D T +LW ++ +
Sbjct: 528 IMDEKT-ASELK---ILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLV--G 581
Query: 270 SRLRDYD-WDYRWMEYPSY---------ARRLKHPHDQSLATYKGHSVLRTLIRCYFSPE 319
+ +Y WD ++ Y Y AR H Q L + GH L + C
Sbjct: 582 YKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGH--LAD-VNC---TR 635
Query: 320 YSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSSWDCNIV 379
Y Y+ TGS+D +V ++D+++G V H P+ + P L + + D ++
Sbjct: 636 YHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVL 695
Query: 380 RWEI 383
W+I
Sbjct: 696 LWDI 699
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 32/115 (27%), Positives = 52/115 (45%)
Query: 157 VAAGS-DNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVWDRRC 215
VA GS D + ++D+ C HK ++++ F+ G + +G+ D +WD
Sbjct: 643 VATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPN-GRFLATGATDGRVLLWD--- 698
Query: 216 FISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWD-IRKMSSNTTDN 269
I G G L GH + + + RDG S D T +LWD ++ TD+
Sbjct: 699 -IGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFEDLETDD 752
>RGD|620575 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEP] [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006309 "apoptotic DNA fragmentation" evidence=ISO] [GO:0006917
"induction of apoptosis" evidence=IDA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0007420 "brain development" evidence=ISO;IEP] [GO:0007568
"aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008635 "activation of cysteine-type
endopeptidase activity involved in apoptotic process by cytochrome
c" evidence=ISO] [GO:0010659 "cardiac muscle cell apoptotic
process" evidence=IMP] [GO:0010952 "positive regulation of
peptidase activity" evidence=ISO] [GO:0016505 "apoptotic protease
activator activity" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEP] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0031072 "heat shock protein binding"
evidence=IPI] [GO:0034349 "glial cell apoptotic process"
evidence=IEP] [GO:0042802 "identical protein binding"
evidence=ISO;IDA] [GO:0043293 "apoptosome" evidence=ISO;IDA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IDA] [GO:0051402 "neuron apoptotic
process" evidence=ISO] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IDA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 RGD:620575 GO:GO:0005524 GO:GO:0007420 GO:GO:0030154
GO:GO:0006952 GO:GO:0006917 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0071560 GO:GO:0007568
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0001666 GO:GO:0007584 GO:GO:0043531 GO:GO:0042802
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293
CTD:317 HOVERGEN:HBG018730 KO:K02084 InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:AF320222 IPI:IPI00324110 RefSeq:NP_076469.1
UniGene:Rn.64522 ProteinModelPortal:Q9EPV5 SMR:Q9EPV5
MINT:MINT-3370020 STRING:Q9EPV5 PRIDE:Q9EPV5 GeneID:78963
KEGG:rno:78963 UCSC:RGD:620575 InParanoid:Q9EPV5 NextBio:614396
Genevestigator:Q9EPV5 GermOnline:ENSRNOG00000008022 GO:GO:0010659
GO:GO:0034349 Uniprot:Q9EPV5
Length = 1249
Score = 149 (57.5 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 39/145 (26%), Positives = 60/145 (41%)
Query: 126 TIHKGLDFSADGDEDEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSD 185
T K LD A DE + FS+D + D + ++D K H
Sbjct: 646 TGEKLLDIKAHEDE----VLCCAFSSDDSYIATCSVDKKVKIWDSGTGKLVHTYEEHSEQ 701
Query: 186 VNTVCFADETGHLIFS-GSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRY 244
VN F +++ HL+ + GS+DS K+WD +++ + GH +T D
Sbjct: 702 VNCCHFTNKSNHLLLATGSNDSFLKLWD----LNQKECRNTMFGHTNSVTHCRFSPDDEL 757
Query: 245 FISNGKDQTTKLWDIRKMSSNTTDN 269
S D T KLWD+R + + N
Sbjct: 758 LASCSADGTLKLWDVRSANEKKSIN 782
Score = 130 (50.8 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 55/236 (23%), Positives = 100/236 (42%)
Query: 40 NSRVYTSQFSNDGSFFVAA--SQESNIKVYNVDKNWKIQKDIETKALRWT--ITDTSLSP 95
+ +V F+N + + A S +S +K+++++ QK+ T +T SP
Sbjct: 699 SEQVNCCHFTNKSNHLLLATGSNDSFLKLWDLN-----QKECRNTMFGHTNSVTHCRFSP 753
Query: 96 DQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDED-EFGIFSVKFSTDGQ 154
D L S + + DV SA E ++ + + S D ED E + +S DG
Sbjct: 754 DDELLASCSADGTLKLWDV-RSANEK-KSINVKRFFLSSEDPPEDVEVIVKCCSWSADGD 811
Query: 155 ELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADET--GHLIFSGSDDSLCKVW- 211
++ A N + + D+ + L H +T+ + D + HL ++W
Sbjct: 812 RIIVAAK-NKVLLLDIHTS--GLLTEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWN 868
Query: 212 -DRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKMSSNT 266
D R ++ R GHL + + DG F++ DQT ++W+ RK+ N+
Sbjct: 869 IDSRVKVADCR------GHLSWVHGVMFSPDGSSFLTASDDQTIRVWETRKVCKNS 918
>TAIR|locus:2159562 [details] [associations]
symbol:AT5G08560 "AT5G08560" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0007062 "sister chromatid
cohesion" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0009888 "tissue development" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010359 "regulation of anion channel activity"
evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0010638 "positive regulation of organelle
organization" evidence=RCA] [GO:0016926 "protein desumoylation"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006697
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 OMA:IRGQFYQ EMBL:AY054535 EMBL:AY064639
IPI:IPI00526669 RefSeq:NP_001078546.1 RefSeq:NP_196473.1
UniGene:At.20607 ProteinModelPortal:Q9FNN2 SMR:Q9FNN2 IntAct:Q9FNN2
PaxDb:Q9FNN2 PRIDE:Q9FNN2 EnsemblPlants:AT5G08560.1
EnsemblPlants:AT5G08560.2 GeneID:830756 KEGG:ath:AT5G08560
TAIR:At5g08560 InParanoid:Q9FNN2 PhylomeDB:Q9FNN2
ProtClustDB:CLSN2687467 Genevestigator:Q9FNN2 Uniprot:Q9FNN2
Length = 589
Score = 145 (56.1 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 65/256 (25%), Positives = 109/256 (42%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTV-CFADETGHLIFSG 202
+ ++ +S D ++++ G++ I +D+ + C K ++ + C G I +G
Sbjct: 322 VIAILWSPDDRQVLTCGAEEVIRRWDVDSGDCVHMY--EKGGISPISCGWYPDGQGIIAG 379
Query: 203 -SDDSLCKVWDRRCFISKGRANGVLMGH-LEGITFIDSRRDGRYFISNGKDQTTKLWDI- 259
+D S+C +WD GR G + ++ I DG++ +S KD L+D
Sbjct: 380 MTDRSIC-MWDL-----DGREKECWKGQRTQKVSDIAMTDDGKWLVSVCKDSVISLFDRE 433
Query: 260 ----RKMSSNTTDNSRLRDYDWDYRWMEYPSYARRLKHPH-DQSLAT-YKGHSVLRTLIR 313
R + S D Y + + RL + D + + YKGH R +IR
Sbjct: 434 ATVERLIEEEDMITSFSLSNDNKYILVNLLNQEIRLWNIEGDPKIVSRYKGHKRSRFIIR 493
Query: 314 CYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPI-YPMLISS 372
F Y Q +I +GS D+ VYI+ +G + +L H V W P ML S+
Sbjct: 494 SCFGG-YK--QAFIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASA 550
Query: 373 SWDCNIVRWEIPGIGE 388
S D I W + I +
Sbjct: 551 SDDGTIRIWGLDRINQ 566
Score = 121 (47.7 bits), Expect = 0.00032, P = 0.00032
Identities = 43/179 (24%), Positives = 84/179 (46%)
Query: 34 WKVDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKALRWTITDTSL 93
WK +V ++DG + V+ ++S I ++ D+ +++ IE + + IT SL
Sbjct: 398 WKGQ-RTQKVSDIAMTDDGKWLVSVCKDSVISLF--DREATVERLIEEEDM---ITSFSL 451
Query: 94 SPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSVKFSTDG 153
S D ++++ + + + ++ + V+ +KG S F I S F
Sbjct: 452 SNDNKYILVNLLNQEIRLWNIEGDPKI----VSRYKGHKRS------RFIIRSC-FGGYK 500
Query: 154 QELVAAGS-DNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSLCKVW 211
Q +A+GS D+ +Y++ K + +P H VN V ++ H++ S SDD ++W
Sbjct: 501 QAFIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIW 559
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 146 (56.5 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 63/250 (25%), Positives = 107/250 (42%)
Query: 140 DEFGIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLI 199
D+ I ++FS G +V+ DN + V+ KC + H V + + +G++I
Sbjct: 994 DDHVITCLQFS--GNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWS---SQMSGNII 1048
Query: 200 FSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDI 259
SGS D KVWD + G L GH + + G +S +D T ++WDI
Sbjct: 1049 ISGSTDRTLKVWD----MDSGACVHTLQGHTSTVRCMHLH--GSKVVSGSRDATLRVWDI 1102
Query: 260 RKMSSNTTDNSRL---RDYDWDYRWMEYPSYARRLK--HPHDQS-LATYKGHSVLRTLIR 313
+ S L R +D + + +Y +K HP Q L T +GH+ R
Sbjct: 1103 EQGSCLHVLVGHLAAVRCVQYDGKLIVSGAYDYMVKIWHPERQECLHTLQGHTN-----R 1157
Query: 314 CYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISSS 373
Y S ++ ++ +GS D S+ ++D+ +G L H + +L+S +
Sbjct: 1158 VY-SLQFDGL--HVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELRQ--NILVSGN 1212
Query: 374 WDCNIVRWEI 383
D + W+I
Sbjct: 1213 ADSTVKVWDI 1222
Score = 140 (54.3 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 54/246 (21%), Positives = 106/246 (43%)
Query: 143 GIFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSG 202
G++S + S G +++ +D + V+D+ + C + H S V C G + SG
Sbjct: 1037 GVWSSQMS--GNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVR--CMHLH-GSKVVSG 1091
Query: 203 SDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWDIRKM 262
S D+ +VWD I +G VL+GHL + + + DG+ +S D K+W +
Sbjct: 1092 SRDATLRVWD----IEQGSCLHVLVGHLAAVRCV--QYDGKLIVSGAYDYMVKIWHPERQ 1145
Query: 263 SS-NTTDNSRLRDYDWDYRWMEYPSYARRLK-HPHDQSLATYKGHSVLRTLIRCYFSPEY 320
+T R Y + + S + D K H+++ +
Sbjct: 1146 ECLHTLQGHTNRVYSLQFDGLHVVSGSLDTSIRVWDVETGNCK-HTLMG---HQSLTSGM 1201
Query: 321 STAQKYIYTGSSDNSVYIYDLVSGAQVAKL---DFHNAPVRDCCWHPIYPMLISSSWDCN 377
Q + +G++D++V ++D+ +G + L + H++ V C +++SS D
Sbjct: 1202 ELRQNILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAVT--CLQFNSRFVVTSSDDGT 1259
Query: 378 IVRWEI 383
+ W++
Sbjct: 1260 VKLWDV 1265
Score = 125 (49.1 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 33/120 (27%), Positives = 62/120 (51%)
Query: 144 IFSVKFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGS 203
++S++F DG +V+ D I V+D++ C + H+S + + + +++ SG+
Sbjct: 1158 VYSLQF--DGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGM---ELRQNILVSGN 1212
Query: 204 DDSLCKVWDRRCFISKGRANGVLMG---HLEGITFIDSRRDGRYFISNGKDQTTKLWDIR 260
DS KVWD I+ G+ L G H +T + + R+ +++ D T KLWD++
Sbjct: 1213 ADSTVKVWD----ITTGQCLQTLSGPNKHHSAVTCLQF--NSRFVVTSSDDGTVKLWDVK 1266
Score = 57 (25.1 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 18/66 (27%), Positives = 34/66 (51%)
Query: 7 VNYSGRGRFSAADSCHVLSRYLPVNGPW--KVDGMNSRVYTSQFSNDGSFFVAASQESNI 64
+ +SG S +D + L + VNG + G V++SQ S G+ ++ S + +
Sbjct: 1001 LQFSGNRIVSGSDD-NTLKVWSAVNGKCLRTLVGHTGGVWSSQMS--GNIIISGSTDRTL 1057
Query: 65 KVYNVD 70
KV+++D
Sbjct: 1058 KVWDMD 1063
>UNIPROTKB|F1NFT8 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0016593 "Cdc73/Paf1 complex" evidence=IEA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IEA] [GO:0035327
"transcriptionally active chromatin" evidence=IEA] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0055087
"Ski complex" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087
OMA:IATGSHH IPI:IPI00584957 EMBL:AADN02040454
ProteinModelPortal:F1NFT8 PRIDE:F1NFT8 Ensembl:ENSGALT00000034634
Uniprot:F1NFT8
Length = 305
Score = 140 (54.3 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 49/174 (28%), Positives = 75/174 (43%)
Query: 88 ITDTSLSPDQRFLVYASICAIVNIVDVGSSARESLANVTIHKGLDFSADGDEDEFGIFSV 147
I + SPD ++L +I I+NI D+ + +H + +G I S+
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGK-------LLH-----TLEGHA--MPIRSL 196
Query: 148 KFSTDGQELVAAGSDNFIYVYDLQANKCSLRIPAHKSDVNTVCFADETGHLIFSGSDDSL 207
FS D Q LV A D +I +YD+Q + + H S V V F + H + S SD S+
Sbjct: 197 TFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSV 256
Query: 208 CKVWD---RRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWD 258
KVWD R C + H + + + G +S G DQ ++D
Sbjct: 257 -KVWDAGTRTCVHT-------FFDHQDQVWGVKYNGSGSKIVSVGDDQEIHIYD 302
Score = 133 (51.9 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 48/191 (25%), Positives = 85/191 (44%)
Query: 199 IFSGSDDSLCKVWDRRCFISKGRANGVLMGHLEGITFIDSRRDGRYFISNGKDQTTKLWD 258
+ SGS D L KVW + K L GH G+ +D G S+ D +LWD
Sbjct: 35 VISGSLDDLVKVW--KWNDEKLDLQWTLEGHQLGVVSVDISHTGSIAASSSLDAHIRLWD 92
Query: 259 ------IRKMSSNTTDNSRLRDYDWDYRWMEYPSYARRLKHPHDQSLATYKGHSVLRTLI 312
I+ + + D L + D +++ S+ ++ + + T K L T
Sbjct: 93 LETGKQIKSIDAGPVDAWSLA-FSPDSQFLATGSHVGKV---NIFGVETGKKEYSLDTRG 148
Query: 313 RCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPVRDCCWHPIYPMLISS 372
+ S YS KY+ +G+ D + I+D+ +G + L+ H P+R + P +L+++
Sbjct: 149 KFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTA 208
Query: 373 SWDCNIVRWEI 383
S D I +++
Sbjct: 209 SDDGYIKIYDV 219
Score = 85 (35.0 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 23/88 (26%), Positives = 47/88 (53%)
Query: 34 WKVDGMNSRVYTSQFSNDGSFFVAASQESNIKVYNVDKNWKIQKDIETKAL-RWTITDTS 92
W ++G V + S+ GS ++S +++I++++++ +I K I+ + W++ +
Sbjct: 58 WTLEGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQI-KSIDAGPVDAWSL---A 113
Query: 93 LSPDQRFLVYASICAIVNIVDVGSSARE 120
SPD +FL S VNI V + +E
Sbjct: 114 FSPDSQFLATGSHVGKVNIFGVETGKKE 141
Score = 72 (30.4 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 24/85 (28%), Positives = 41/85 (48%)
Query: 299 LATYKGHSV-LRTLIRCYFSPEYSTAQKYIYTGSSDNSVYIYDLVSGAQVAKLDFHNAPV 357
L T +GH++ +R+L FSP+ + + T S D + IYD+ L H + V
Sbjct: 183 LHTLEGHAMPIRSLT---FSPD----SQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWV 235
Query: 358 RDCCWHPIYPMLISSSWDCNIVRWE 382
+ + P +SSS D ++ W+
Sbjct: 236 LNVAFCPDDTHFVSSSSDKSVKVWD 260
WARNING: HSPs involving 422 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.426 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 408 395 0.00096 117 3 11 22 0.38 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 672
No. of states in DFA: 625 (66 KB)
Total size of DFA: 293 KB (2150 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.22u 0.08s 33.30t Elapsed: 00:00:02
Total cpu time: 33.30u 0.08s 33.38t Elapsed: 00:00:02
Start: Fri May 10 21:06:51 2013 End: Fri May 10 21:06:53 2013
WARNINGS ISSUED: 2