Query 015372
Match_columns 408
No_of_seqs 31 out of 33
Neff 2.5
Searched_HMMs 29240
Date Mon Mar 25 11:28:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015372.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015372hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pt5_A NANS (YJHS), A 9-O-acet 24.7 24 0.00083 34.8 1.3 43 80-122 189-245 (337)
2 3v2y_A Sphingosine 1-phosphate 21.2 3.8E+02 0.013 25.2 8.7 46 133-187 66-111 (520)
3 3eml_A Human adenosine A2A rec 16.0 5.9E+02 0.02 22.7 11.0 47 132-187 23-69 (488)
4 2z73_A Rhodopsin; visual pigme 14.6 1.2E+02 0.0041 27.5 3.4 44 133-185 37-80 (448)
5 4dkl_A MU-type opioid receptor 13.7 1.5E+02 0.005 26.4 3.7 45 133-186 20-64 (464)
6 3rze_A Histamine H1 receptor, 13.6 1.6E+02 0.0054 26.2 3.9 47 131-186 9-55 (452)
7 4amj_A Beta-1 adrenergic recep 13.2 1.4E+02 0.0048 24.8 3.3 47 132-187 13-59 (315)
8 1zxu_A AT5G01750 protein; PFAM 12.2 47 0.0016 29.1 0.1 19 20-38 6-24 (217)
9 3vw7_A Proteinase-activated re 11.6 1.8E+02 0.0061 26.2 3.6 46 133-187 23-68 (484)
10 4ea3_A Fusion protein of nocic 10.6 2.3E+02 0.0079 25.7 4.1 46 132-186 127-172 (434)
No 1
>3pt5_A NANS (YJHS), A 9-O-acetyl N-acetylneuraminic acid; SGNH hydrolase, 9-O-acetyl N-acetylneuraminic acid esterase, structural genomics; 1.60A {Escherichia coli O157}
Probab=24.66 E-value=24 Score=34.81 Aligned_cols=43 Identities=5% Similarity=0.087 Sum_probs=29.3
Q ss_pred CccccccCCc--hh------------hhhhhhHHhhhhcccchhhhhhhhhHHHHHH
Q 015372 80 HQESANFRSN--KA------------FEEWNSLTAKFSGAANIPFMLLQLPQIILNA 122 (408)
Q Consensus 80 h~~~~~~~~~--~~------------~~~Wds~T~~l~~~a~iPFL~LqlPQIi~Na 122 (408)
||||.+.... .. +++|+.++++......+||++-|++..+++.
T Consensus 189 yQGESN~~~~~~~~Y~~~f~~LI~~wR~d~~~~~~q~~~~~~lPFi~gqL~~f~~~~ 245 (337)
T 3pt5_A 189 MQGEFDLMTSDYASHPQHFNHMVEAFRRDLKQYHSQLNNITDAPWFCGDTTWYWKEN 245 (337)
T ss_dssp ECCTGGGGSTTGGGHHHHHHHHHHHHHHHHGGGGGGCC---CCCEEEECCCHHHHHH
T ss_pred ecCCccccCcCHHHHHHHHHHHHHHHHHHHcccccccccCCCCCEEEEECchhhhcc
Confidence 8998887764 33 3345555555545779999999999988776
No 2
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=21.16 E-value=3.8e+02 Score=25.24 Aligned_cols=46 Identities=22% Similarity=0.166 Sum_probs=34.9
Q ss_pred hhhhchhHHHhhhhhhhhhHHHHhhccccceeEEeeehhhhhHHHHHHHHhhCCC
Q 015372 133 LLAVPWLGMLTGLLGNLSLLSYFIKKREKEAIVVQTLGVVSTYVVISQLAVGEAM 187 (408)
Q Consensus 133 L~av~W~g~ltGLLGNLsLLSYFA~KrE~~A~vVQ~vGVvSt~iVL~QLa~Ag~M 187 (408)
+.++-+.-.+.|++||++.+--+.++|... -.+++.|.-||++..+
T Consensus 66 ~~~~~~~i~~~g~~gN~lvi~vi~~~~~lr---------~~~~~~l~nLA~aDll 111 (520)
T 3v2y_A 66 TSVVFILICCFIILENIFVLLTIWKTKKFH---------RPMYYFIGNLALSDLL 111 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSTTC---------SHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcccc---------ChHHHHHHHHHHHHHH
Confidence 456677778999999999988777666532 1468888899998854
No 3
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=15.98 E-value=5.9e+02 Score=22.72 Aligned_cols=47 Identities=15% Similarity=0.121 Sum_probs=34.1
Q ss_pred hhhhhchhHHHhhhhhhhhhHHHHhhccccceeEEeeehhhhhHHHHHHHHhhCCC
Q 015372 132 ALLAVPWLGMLTGLLGNLSLLSYFIKKREKEAIVVQTLGVVSTYVVISQLAVGEAM 187 (408)
Q Consensus 132 AL~av~W~g~ltGLLGNLsLLSYFA~KrE~~A~vVQ~vGVvSt~iVL~QLa~Ag~M 187 (408)
.+.++-..-.+.|++||++++--+.+++... -.+++.|..||++..+
T Consensus 23 ~~~~~~~~i~~~gi~gN~lvi~~~~~~~~~~---------~~~~~~l~~La~aDll 69 (488)
T 3eml_A 23 VYITVELAIAVLAILGNVLVCWAVWLNSNLQ---------NVTNYFVVSLAAADIA 69 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCGGGC---------SSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhheeeccccC---------ChHHHHHHHHHHHHHH
Confidence 4455666677899999999997776665432 1467888999998843
No 4
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=14.56 E-value=1.2e+02 Score=27.51 Aligned_cols=44 Identities=20% Similarity=0.199 Sum_probs=28.2
Q ss_pred hhhhchhHHHhhhhhhhhhHHHHhhccccceeEEeeehhhhhHHHHHHHHhhC
Q 015372 133 LLAVPWLGMLTGLLGNLSLLSYFIKKREKEAIVVQTLGVVSTYVVISQLAVGE 185 (408)
Q Consensus 133 L~av~W~g~ltGLLGNLsLLSYFA~KrE~~A~vVQ~vGVvSt~iVL~QLa~Ag 185 (408)
+.++-..-.+.|++||++++--+.++|...- ++++.+..||+++
T Consensus 37 ~~i~~~ii~i~gi~gN~lvi~vi~~~~~~~~---------~~~~ll~~LaiaD 80 (448)
T 2z73_A 37 LGIFIGICGIIGCGGNGIVIYLFTKTKSLQT---------PANMFIINLAFSD 80 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSTTCS---------TTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHhhhhhhhccccCC---------ccchHHHHHHHHH
Confidence 3455566678999999999887776654321 2345555555554
No 5
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=13.66 E-value=1.5e+02 Score=26.44 Aligned_cols=45 Identities=22% Similarity=0.399 Sum_probs=31.4
Q ss_pred hhhhchhHHHhhhhhhhhhHHHHhhccccceeEEeeehhhhhHHHHHHHHhhCC
Q 015372 133 LLAVPWLGMLTGLLGNLSLLSYFIKKREKEAIVVQTLGVVSTYVVISQLAVGEA 186 (408)
Q Consensus 133 L~av~W~g~ltGLLGNLsLLSYFA~KrE~~A~vVQ~vGVvSt~iVL~QLa~Ag~ 186 (408)
+.++-..-.+.|++||++++--+.+++... -.+++.+..||++..
T Consensus 20 ~~~~~~~~~~~gi~gN~lvi~~~~~~~~~~---------~~~~~~l~~La~~Dl 64 (464)
T 4dkl_A 20 IMALYSIVCVVGLFGNFLVMYVIVRYTKMK---------TATNIYIFNLALADA 64 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSTTC---------SHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHeehhhhhccccC---------CHHHHHHHHHHHHHH
Confidence 344555567889999999998887765532 235677777777774
No 6
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=13.63 E-value=1.6e+02 Score=26.21 Aligned_cols=47 Identities=21% Similarity=0.106 Sum_probs=31.1
Q ss_pred chhhhhchhHHHhhhhhhhhhHHHHhhccccceeEEeeehhhhhHHHHHHHHhhCC
Q 015372 131 AALLAVPWLGMLTGLLGNLSLLSYFIKKREKEAIVVQTLGVVSTYVVISQLAVGEA 186 (408)
Q Consensus 131 ~AL~av~W~g~ltGLLGNLsLLSYFA~KrE~~A~vVQ~vGVvSt~iVL~QLa~Ag~ 186 (408)
..+.++-..-.+.|++||++++--+.++|...- .+++.|.-||++..
T Consensus 9 ~~~~~~~~~~~~~gi~gN~~vi~~~~~~~~~~~---------~~~~~l~~La~~Dl 55 (452)
T 3rze_A 9 MPLVVVLSTICLVTVGLNLLVLYAVRSERKLHT---------VGNLYIVSLSVADL 55 (452)
T ss_dssp CGGGTHHHHHHHHHHHHHHHHHHHHHHCSTTCC---------GGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccCC---------hhHHHHHHHHHHHH
Confidence 345566667788999999999877776654321 35556666666554
No 7
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=13.24 E-value=1.4e+02 Score=24.82 Aligned_cols=47 Identities=17% Similarity=0.181 Sum_probs=32.0
Q ss_pred hhhhhchhHHHhhhhhhhhhHHHHhhccccceeEEeeehhhhhHHHHHHHHhhCCC
Q 015372 132 ALLAVPWLGMLTGLLGNLSLLSYFIKKREKEAIVVQTLGVVSTYVVISQLAVGEAM 187 (408)
Q Consensus 132 AL~av~W~g~ltGLLGNLsLLSYFA~KrE~~A~vVQ~vGVvSt~iVL~QLa~Ag~M 187 (408)
.+.++-..-.+.|++||++++--+.++|... -++.+.+.-||+++.+
T Consensus 13 ~~~~~~~~~~~~gi~gN~lvi~~i~~~~~~~---------~~~~~ll~~LaiaDll 59 (315)
T 4amj_A 13 GMSLLMALVVLLIVAGNVLVIAAIGSTQRLQ---------TLTNLFITSLACADLV 59 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCGGGC---------CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHhhhchhhc---------chHHHHHHHHHHHHHH
Confidence 4445566678899999999998887666532 1355666677766643
No 8
>1zxu_A AT5G01750 protein; PFAM PF01167, TULP, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 1.70A {Arabidopsis thaliana} SCOP: d.23.1.2 PDB: 2q4m_A
Probab=12.19 E-value=47 Score=29.07 Aligned_cols=19 Identities=21% Similarity=0.282 Sum_probs=0.4
Q ss_pred CccCCCcccccCCCccccc
Q 015372 20 FYRYPDCLSTSQSLPLKSL 38 (408)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~ 38 (408)
-||||+|-.+++--|+.+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~ 24 (217)
T 1zxu_A 6 VYAYPQGSGPSGAPTPQAG 24 (217)
T ss_dssp ------------------C
T ss_pred EEeCCCCCCCCCCCCCCCc
Confidence 3999999999888777653
No 9
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=11.57 E-value=1.8e+02 Score=26.25 Aligned_cols=46 Identities=20% Similarity=0.156 Sum_probs=31.2
Q ss_pred hhhhchhHHHhhhhhhhhhHHHHhhccccceeEEeeehhhhhHHHHHHHHhhCCC
Q 015372 133 LLAVPWLGMLTGLLGNLSLLSYFIKKREKEAIVVQTLGVVSTYVVISQLAVGEAM 187 (408)
Q Consensus 133 L~av~W~g~ltGLLGNLsLLSYFA~KrE~~A~vVQ~vGVvSt~iVL~QLa~Ag~M 187 (408)
+.++-..-.+.|++||++.+--+.++|... -.+++.|..||++..+
T Consensus 23 ~~~~~~~i~~~~i~gN~lvi~~~~~~~~l~---------~~~~~~l~~La~aDll 68 (484)
T 3vw7_A 23 VPSVYTGVFVVSLPLNIMAIVVFILKMKVK---------KPAVVYMLHLATADVL 68 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHGGGC---------CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccC---------CHHHHHHHHHHHHHHH
Confidence 445555667889999999887676655432 1456777777777643
No 10
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=10.60 E-value=2.3e+02 Score=25.74 Aligned_cols=46 Identities=20% Similarity=0.349 Sum_probs=32.7
Q ss_pred hhhhhchhHHHhhhhhhhhhHHHHhhccccceeEEeeehhhhhHHHHHHHHhhCC
Q 015372 132 ALLAVPWLGMLTGLLGNLSLLSYFIKKREKEAIVVQTLGVVSTYVVISQLAVGEA 186 (408)
Q Consensus 132 AL~av~W~g~ltGLLGNLsLLSYFA~KrE~~A~vVQ~vGVvSt~iVL~QLa~Ag~ 186 (408)
.+.++-..-.+.|++||++++--+.++|... -.+++.+..||++..
T Consensus 127 ~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~---------~~~~~ll~~LAvsDl 172 (434)
T 4ea3_A 127 TIVGLYLAVCVGGLLGNCLVMYVILRHTKMK---------TATNIYIFNLALADT 172 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCSCC---------CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHeeeeeeecCccC---------chhHHHHHHHHHHHH
Confidence 4455666677889999999888776665532 246777778887774
Done!