Query 015372
Match_columns 408
No_of_seqs 31 out of 33
Neff 2.5
Searched_HMMs 13730
Date Mon Mar 25 11:28:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015372.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/015372hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1tska_ g.3.7.2 (A:) Toxin ts 14.3 20 0.0014 23.4 0.3 16 18-33 5-20 (35)
2 d1u19a_ f.13.1.2 (A:) Rhodopsi 12.4 67 0.0048 25.6 3.1 45 134-187 41-85 (348)
3 d1fcqa_ c.1.8.9 (A:) Bee venom 8.9 39 0.0028 30.9 0.5 12 19-30 173-184 (321)
4 d1guua_ a.4.1.3 (A:) c-Myb, DN 8.2 53 0.0039 21.5 0.8 12 297-308 39-50 (50)
5 d1h9aa1 c.2.1.3 (A:1-181,A:413 7.7 67 0.0048 26.3 1.4 12 118-129 184-195 (195)
6 d1be3k_ f.23.15.1 (K:) Subunit 4.8 1.3E+02 0.0091 18.4 1.1 10 294-303 3-12 (26)
7 d2axtm1 f.23.35.1 (M:1-36) Pho 4.7 1.5E+02 0.011 19.4 1.5 16 285-300 7-22 (36)
8 d1gvda_ a.4.1.3 (A:) c-Myb, DN 4.6 1.5E+02 0.011 19.5 1.5 12 297-308 41-52 (52)
9 d1coja1 a.2.11.1 (A:2-90) Fe s 4.3 1.5E+02 0.011 21.2 1.4 17 303-319 8-24 (89)
10 d1a6sa_ a.61.1.4 (A:) GAG poly 4.1 1.4E+02 0.01 22.8 1.1 19 89-107 45-63 (87)
No 1
>d1tska_ g.3.7.2 (A:) Toxin ts kappa {Scorpion (Tityus serrulatus) [TaxId: 6887]}
Probab=14.31 E-value=20 Score=23.44 Aligned_cols=16 Identities=44% Similarity=0.893 Sum_probs=11.7
Q ss_pred CCCccCCCcccccCCC
Q 015372 18 EPFYRYPDCLSTSQSL 33 (408)
Q Consensus 18 ~~~~~~~~~~~~~~~~ 33 (408)
..-||-|||.|.-..|
T Consensus 5 qrcyrspdcysackkl 20 (35)
T d1tska_ 5 QRCYRSPDCYSACKKL 20 (35)
T ss_dssp CCCSSSCSSHHHHHHH
T ss_pred ccccCCccHHHHHHHH
Confidence 3469999999875443
No 2
>d1u19a_ f.13.1.2 (A:) Rhodopsin {Cow (Bos taurus) [TaxId: 9913]}
Probab=12.41 E-value=67 Score=25.55 Aligned_cols=45 Identities=18% Similarity=0.227 Sum_probs=30.1
Q ss_pred hhhchhHHHhhhhhhhhhHHHHhhccccceeEEeeehhhhhHHHHHHHHhhCCC
Q 015372 134 LAVPWLGMLTGLLGNLSLLSYFIKKREKEAIVVQTLGVVSTYVVISQLAVGEAM 187 (408)
Q Consensus 134 ~av~W~g~ltGLLGNLsLLSYFA~KrE~~A~vVQ~vGVvSt~iVL~QLa~Ag~M 187 (408)
+++-..-.+-|++||++.+--+.++|+..- .+++.+..||+++.+
T Consensus 41 ~~~~~ii~v~gi~gN~lvi~vi~~~k~lr~---------~~~~~l~nLaiaDll 85 (348)
T d1u19a_ 41 AAYMFLLIMLGFPINFLTLYVTVQHKKLRT---------PLNYILLNLAVADLF 85 (348)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSTTCCS---------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHeehhhhccCCCCC---------HhHHHHHHHHHHHHH
Confidence 344444566799999998877776655321 256677788888753
No 3
>d1fcqa_ c.1.8.9 (A:) Bee venom hyaluronidase {Honeybee (Apis mellifera) [TaxId: 7460]}
Probab=8.87 E-value=39 Score=30.86 Aligned_cols=12 Identities=33% Similarity=0.996 Sum_probs=10.0
Q ss_pred CCccCCCccccc
Q 015372 19 PFYRYPDCLSTS 30 (408)
Q Consensus 19 ~~~~~~~~~~~~ 30 (408)
-||.||||-...
T Consensus 173 GyYlfPdCyN~~ 184 (321)
T d1fcqa_ 173 GYYAYPYCYNLT 184 (321)
T ss_dssp EEBTCSCCCTTS
T ss_pred ccccccccccCC
Confidence 599999998753
No 4
>d1guua_ a.4.1.3 (A:) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=8.15 E-value=53 Score=21.49 Aligned_cols=12 Identities=33% Similarity=0.913 Sum_probs=9.4
Q ss_pred HHHHHhhcCCCC
Q 015372 297 VSQMWTNFLNPD 308 (408)
Q Consensus 297 VaQmwtN~lnP~ 308 (408)
+.+=|+|++||+
T Consensus 39 cr~Rw~~~L~P~ 50 (50)
T d1guua_ 39 CQHRWQKVLNPE 50 (50)
T ss_dssp HHHHHHHHHSCC
T ss_pred HHHHHHhhCCCC
Confidence 556689999986
No 5
>d1h9aa1 c.2.1.3 (A:1-181,A:413-426) Glucose 6-phosphate dehydrogenase, N-terminal domain {Leuconostoc mesenteroides [TaxId: 1245]}
Probab=7.72 E-value=67 Score=26.34 Aligned_cols=12 Identities=8% Similarity=0.119 Sum_probs=9.4
Q ss_pred HHHHHHHhhcCC
Q 015372 118 IILNARNLLAGN 129 (408)
Q Consensus 118 Ii~Na~nl~aGn 129 (408)
.+.|-||||+||
T Consensus 184 ~v~~iqnlm~~~ 195 (195)
T d1h9aa1 184 YERMIHDTMNGD 195 (195)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHhcCC
Confidence 357888898887
No 6
>d1be3k_ f.23.15.1 (K:) Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) {Cow (Bos taurus) [TaxId: 9913]}
Probab=4.78 E-value=1.3e+02 Score=18.39 Aligned_cols=10 Identities=40% Similarity=1.425 Sum_probs=7.9
Q ss_pred HhhHHHHHhh
Q 015372 294 WMPVSQMWTN 303 (408)
Q Consensus 294 wmPVaQmwtN 303 (408)
|.|-+|+|--
T Consensus 3 wvptaqlwga 12 (26)
T d1be3k_ 3 WVPTAQLWGA 12 (26)
T ss_dssp HHHHHHHHHH
T ss_pred cchHHHHHhh
Confidence 7788999853
No 7
>d2axtm1 f.23.35.1 (M:1-36) Photosystem II reaction center protein M, PsbM {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=4.67 E-value=1.5e+02 Score=19.42 Aligned_cols=16 Identities=38% Similarity=0.590 Sum_probs=12.9
Q ss_pred hhhHHHHHHHhhHHHH
Q 015372 285 GWTATLLFMWMPVSQM 300 (408)
Q Consensus 285 gWTATLLFMwmPVaQm 300 (408)
|-.||+||...|-+-+
T Consensus 7 g~iAt~LFilvPt~FL 22 (36)
T d2axtm1 7 GLIATALFVLVPSVFL 22 (36)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 6789999999987654
No 8
>d1gvda_ a.4.1.3 (A:) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=4.63 E-value=1.5e+02 Score=19.49 Aligned_cols=12 Identities=42% Similarity=0.985 Sum_probs=8.6
Q ss_pred HHHHHhhcCCCC
Q 015372 297 VSQMWTNFLNPD 308 (408)
Q Consensus 297 VaQmwtN~lnP~ 308 (408)
+.+=|+|++||+
T Consensus 41 c~~Rw~~~L~P~ 52 (52)
T d1gvda_ 41 CRERWHNHLNPE 52 (52)
T ss_dssp HHHHHHHTTSCC
T ss_pred HHHHHHhhCCCC
Confidence 445588888886
No 9
>d1coja1 a.2.11.1 (A:2-90) Fe superoxide dismutase (FeSOD) {Aquifex pyrophilus [TaxId: 2714]}
Probab=4.28 E-value=1.5e+02 Score=21.25 Aligned_cols=17 Identities=29% Similarity=0.679 Sum_probs=13.6
Q ss_pred hcCCCCCccchhHHHHH
Q 015372 303 NFLNPDNIKGLSASSML 319 (408)
Q Consensus 303 N~lnP~nl~GLS~~T~L 319 (408)
..+.|..++|+|.-||=
T Consensus 8 d~lep~~~~gIs~~tm~ 24 (89)
T d1coja1 8 DHLKPQNLEGISNEQIE 24 (89)
T ss_dssp GGGCCCSCSSSCHHHHH
T ss_pred cccCcccccccCHHHHH
Confidence 46788888999988873
No 10
>d1a6sa_ a.61.1.4 (A:) GAG polyprotein M-domain {Rous sarcoma virus [TaxId: 11886]}
Probab=4.13 E-value=1.4e+02 Score=22.80 Aligned_cols=19 Identities=26% Similarity=0.326 Sum_probs=15.0
Q ss_pred chhhhhhhhHHhhhhcccc
Q 015372 89 NKAFEEWNSLTAKFSGAAN 107 (408)
Q Consensus 89 ~~~~~~Wds~T~~l~~~a~ 107 (408)
..+..+||..|+.|+.-++
T Consensus 45 i~~pg~Wd~~TAaLaqram 63 (87)
T d1a6sa_ 45 LYSPGSWDPITAALSQRAM 63 (87)
T ss_dssp GGSTTTTHHHHHHHHHTTT
T ss_pred hcCCCchHHHHHHHHHHHH
Confidence 3456799999999987665
Done!