Query 015377
Match_columns 408
No_of_seqs 141 out of 1871
Neff 10.2
Searched_HMMs 46136
Date Fri Mar 29 05:44:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015377.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015377hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0253 Synaptic vesicle trans 100.0 8.7E-52 1.9E-56 363.8 29.4 380 1-391 139-527 (528)
2 KOG0569 Permease of the major 100.0 2.2E-42 4.8E-47 326.1 31.7 363 1-401 86-472 (485)
3 TIGR01299 synapt_SV2 synaptic 100.0 5.4E-42 1.2E-46 343.2 34.4 389 1-391 228-741 (742)
4 TIGR00887 2A0109 phosphate:H+ 100.0 1.1E-39 2.3E-44 321.0 31.6 371 1-397 82-502 (502)
5 TIGR00898 2A0119 cation transp 100.0 1E-36 2.2E-41 300.7 34.5 349 1-394 153-505 (505)
6 KOG0254 Predicted transporter 100.0 1.1E-35 2.3E-40 292.8 28.2 367 1-398 115-498 (513)
7 KOG0255 Synaptic vesicle trans 100.0 1.3E-34 2.8E-39 286.5 33.3 361 1-400 144-509 (521)
8 PF00083 Sugar_tr: Sugar (and 100.0 4E-42 8.7E-47 334.5 -21.3 360 1-397 72-450 (451)
9 PRK10642 proline/glycine betai 100.0 4.7E-32 1E-36 265.9 33.7 336 1-393 83-439 (490)
10 PRK10077 xylE D-xylose transpo 100.0 5.4E-32 1.2E-36 265.4 33.2 357 1-397 81-471 (479)
11 KOG0252 Inorganic phosphate tr 100.0 2.3E-34 5E-39 261.5 11.5 368 1-397 110-511 (538)
12 PRK09952 shikimate transporter 100.0 5.7E-29 1.2E-33 240.7 33.7 323 1-387 90-436 (438)
13 TIGR00879 SP MFS transporter, 100.0 1.3E-29 2.9E-34 247.8 28.6 366 1-393 97-480 (481)
14 PRK10406 alpha-ketoglutarate t 100.0 3.4E-28 7.3E-33 235.1 34.4 319 1-391 89-430 (432)
15 TIGR00903 2A0129 major facilit 100.0 4.7E-27 1E-31 221.3 30.9 309 1-383 52-365 (368)
16 PRK15075 citrate-proton sympor 100.0 3.2E-25 7E-30 214.5 33.9 323 1-393 82-429 (434)
17 PRK12307 putative sialic acid 100.0 2.3E-25 5.1E-30 215.1 31.3 330 1-386 79-412 (426)
18 PRK11551 putative 3-hydroxyphe 99.9 8.5E-25 1.8E-29 209.9 33.7 318 1-383 76-396 (406)
19 TIGR02332 HpaX 4-hydroxyphenyl 99.9 4E-25 8.7E-30 212.2 29.8 317 1-360 69-397 (412)
20 TIGR00891 2A0112 putative sial 99.9 1.7E-24 3.7E-29 207.4 29.5 316 1-360 73-392 (405)
21 PRK11663 regulatory protein Uh 99.9 3.2E-24 7E-29 207.4 31.2 338 1-390 84-431 (434)
22 COG2271 UhpC Sugar phosphate p 99.9 3.1E-25 6.6E-30 201.4 20.4 331 2-383 91-434 (448)
23 TIGR00895 2A0115 benzoate tran 99.9 6.1E-24 1.3E-28 202.9 30.4 318 1-355 78-397 (398)
24 TIGR00893 2A0114 d-galactonate 99.9 5.8E-24 1.3E-28 202.6 27.9 332 1-381 55-397 (399)
25 PRK09556 uhpT sugar phosphate 99.9 1.3E-23 2.7E-28 205.2 25.8 338 1-387 90-454 (467)
26 PRK10489 enterobactin exporter 99.9 3.3E-23 7.2E-28 199.5 27.4 333 1-400 78-416 (417)
27 PRK03545 putative arabinose tr 99.9 1.6E-22 3.6E-27 193.0 31.9 307 1-383 70-380 (390)
28 PRK03893 putative sialic acid 99.9 9.9E-23 2.1E-27 200.7 29.7 358 1-384 81-455 (496)
29 PRK09705 cynX putative cyanate 99.9 5.1E-22 1.1E-26 189.6 32.0 315 1-392 70-390 (393)
30 TIGR00883 2A0106 metabolite-pr 99.9 2.5E-22 5.4E-27 191.4 29.7 295 1-360 61-377 (394)
31 PRK11273 glpT sn-glycerol-3-ph 99.9 7.8E-22 1.7E-26 191.8 30.4 338 1-388 89-441 (452)
32 PRK05122 major facilitator sup 99.9 2E-21 4.4E-26 186.0 32.6 313 1-393 77-398 (399)
33 TIGR00890 2A0111 Oxalate/Forma 99.9 7.7E-22 1.7E-26 186.9 28.6 306 1-375 64-374 (377)
34 COG2814 AraJ Arabinose efflux 99.9 3.4E-21 7.4E-26 177.3 31.1 309 1-382 74-385 (394)
35 TIGR00894 2A0114euk Na(+)-depe 99.9 5E-22 1.1E-26 194.1 27.1 328 1-382 102-449 (465)
36 PLN00028 nitrate transmembrane 99.9 8.5E-22 1.8E-26 192.4 28.3 319 1-383 97-433 (476)
37 TIGR00712 glpT glycerol-3-phos 99.9 3.8E-21 8.2E-26 186.3 29.1 338 1-387 87-437 (438)
38 PRK03699 putative transporter; 99.9 6.5E-21 1.4E-25 182.2 29.9 311 1-383 68-380 (394)
39 TIGR00899 2A0120 sugar efflux 99.9 2.8E-20 6E-25 176.5 32.6 308 1-382 59-373 (375)
40 cd06174 MFS The Major Facilita 99.9 1.9E-20 4.2E-25 175.4 30.6 289 1-381 60-350 (352)
41 TIGR00900 2A0121 H+ Antiporter 99.9 2.8E-20 6E-25 175.5 29.5 294 1-358 60-363 (365)
42 PRK12382 putative transporter; 99.9 4.4E-20 9.5E-25 176.4 30.5 304 1-383 77-389 (392)
43 PRK11010 ampG muropeptide tran 99.9 1.8E-19 3.9E-24 176.5 35.3 314 2-383 77-403 (491)
44 TIGR00881 2A0104 phosphoglycer 99.9 9.3E-21 2E-25 179.6 25.0 310 1-360 56-374 (379)
45 TIGR00711 efflux_EmrB drug res 99.9 5E-20 1.1E-24 181.0 28.1 328 1-357 63-409 (485)
46 PRK15011 sugar efflux transpor 99.9 4E-19 8.7E-24 169.7 32.7 312 1-386 77-393 (393)
47 PRK09874 drug efflux system pr 99.9 1.8E-19 4E-24 172.9 30.4 316 1-383 80-398 (408)
48 PRK10473 multidrug efflux syst 99.9 8.3E-19 1.8E-23 167.6 33.1 117 1-117 64-182 (392)
49 PRK10213 nepI ribonucleoside t 99.9 9.9E-19 2.1E-23 166.9 33.5 117 1-117 81-199 (394)
50 PRK10091 MFS transport protein 99.9 4.2E-19 9.2E-24 168.9 30.7 306 1-382 64-375 (382)
51 PRK10504 putative transporter; 99.9 2E-18 4.4E-23 169.0 33.9 333 1-359 71-416 (471)
52 PF07690 MFS_1: Major Facilita 99.9 8.4E-20 1.8E-24 171.4 23.0 287 1-349 58-352 (352)
53 TIGR00710 efflux_Bcr_CflA drug 99.9 3.9E-18 8.4E-23 162.3 34.1 117 1-117 66-184 (385)
54 PRK15034 nitrate/nitrite trans 99.9 9.7E-19 2.1E-23 166.7 29.2 305 1-382 96-453 (462)
55 PRK15402 multidrug efflux syst 99.9 4.5E-18 9.7E-23 163.3 33.3 118 1-118 74-193 (406)
56 PRK14995 methyl viologen resis 99.8 1.6E-18 3.5E-23 170.4 30.7 333 1-357 67-412 (495)
57 TIGR00897 2A0118 polyol permea 99.8 8.1E-18 1.8E-22 161.2 33.5 313 1-382 74-400 (402)
58 KOG2533 Permease of the major 99.8 1.1E-19 2.4E-24 174.5 20.1 334 4-388 110-462 (495)
59 PRK11102 bicyclomycin/multidru 99.8 5.7E-18 1.2E-22 160.9 31.7 117 1-117 52-170 (377)
60 PRK11195 lysophospholipid tran 99.8 4.3E-18 9.4E-23 162.5 30.6 319 1-388 64-385 (393)
61 PRK11043 putative transporter; 99.8 9.1E-18 2E-22 160.9 33.0 284 1-358 67-357 (401)
62 TIGR00892 2A0113 monocarboxyla 99.8 6.7E-19 1.5E-23 171.2 24.6 328 1-377 80-415 (455)
63 KOG2532 Permease of the major 99.8 4.5E-19 9.7E-24 170.0 22.3 327 1-382 99-446 (466)
64 COG2223 NarK Nitrate/nitrite t 99.8 1.5E-18 3.3E-23 158.3 24.3 311 1-382 75-400 (417)
65 PRK08633 2-acyl-glycerophospho 99.8 1.4E-17 3E-22 180.2 32.1 323 1-385 73-412 (1146)
66 PRK15403 multidrug efflux syst 99.8 5.6E-17 1.2E-21 155.8 32.7 118 1-118 77-196 (413)
67 PRK03633 putative MFS family t 99.8 3.5E-17 7.6E-22 155.7 31.0 301 1-380 67-369 (381)
68 TIGR00886 2A0108 nitrite extru 99.8 2.8E-18 6E-23 162.3 22.9 118 1-118 63-193 (366)
69 PRK11646 multidrug resistance 99.8 4.5E-17 9.8E-22 155.8 30.0 114 1-115 72-187 (400)
70 TIGR00901 2A0125 AmpG-related 99.8 1.6E-17 3.4E-22 156.7 26.1 277 2-342 53-355 (356)
71 PRK10133 L-fucose transporter; 99.8 1.3E-16 2.8E-21 154.3 30.9 300 1-371 87-421 (438)
72 PRK11902 ampG muropeptide tran 99.8 4.9E-16 1.1E-20 149.0 34.7 314 3-387 65-394 (402)
73 TIGR00885 fucP L-fucose:H+ sym 99.8 1.3E-16 2.7E-21 152.9 30.3 285 1-358 64-381 (410)
74 PRK10054 putative transporter; 99.8 8.3E-17 1.8E-21 153.7 27.5 308 1-378 69-379 (395)
75 PRK11652 emrD multidrug resist 99.8 8.6E-16 1.9E-20 146.9 32.5 118 1-118 69-188 (394)
76 TIGR00889 2A0110 nucleoside tr 99.8 7.7E-16 1.7E-20 148.0 29.6 324 2-390 65-409 (418)
77 KOG1330 Sugar transporter/spin 99.8 9.6E-19 2.1E-23 160.8 8.4 118 1-118 94-214 (493)
78 TIGR00896 CynX cyanate transpo 99.8 7.7E-16 1.7E-20 145.1 27.9 285 1-360 61-350 (355)
79 PRK06814 acylglycerophosphoeth 99.8 5.3E-16 1.2E-20 167.6 30.3 293 1-357 78-395 (1140)
80 TIGR00792 gph sugar (Glycoside 99.8 1.6E-15 3.5E-20 147.0 29.5 291 1-359 65-381 (437)
81 PRK09528 lacY galactoside perm 99.7 1.6E-15 3.4E-20 146.3 26.9 135 251-385 270-405 (420)
82 TIGR00902 2A0127 phenyl propri 99.7 2.2E-14 4.7E-19 136.6 32.1 286 21-379 87-375 (382)
83 TIGR00882 2A0105 oligosacchari 99.7 8.1E-15 1.8E-19 140.3 28.9 318 1-382 64-394 (396)
84 PRK11128 putative 3-phenylprop 99.7 1E-13 2.2E-18 132.0 31.0 284 22-378 88-374 (382)
85 KOG2504 Monocarboxylate transp 99.7 7.7E-15 1.7E-19 142.6 22.3 362 1-383 107-476 (509)
86 PTZ00207 hypothetical protein; 99.7 5.3E-14 1.1E-18 138.1 26.6 133 1-135 87-229 (591)
87 TIGR00924 yjdL_sub1_fam amino 99.7 2.3E-13 5.1E-18 132.8 30.0 105 2-106 76-184 (475)
88 PF05977 MFS_3: Transmembrane 99.6 4.4E-13 9.5E-18 131.0 31.2 317 1-382 71-393 (524)
89 PF06609 TRI12: Fungal trichot 99.6 2.7E-13 5.9E-18 132.4 28.2 328 2-353 105-462 (599)
90 TIGR02718 sider_RhtX_FptX side 99.6 8.3E-13 1.8E-17 126.1 30.8 307 1-377 65-385 (390)
91 PF11700 ATG22: Vacuole efflux 99.6 3E-12 6.6E-17 123.8 33.4 324 4-390 100-474 (477)
92 PRK10207 dipeptide/tripeptide 99.6 4.4E-13 9.6E-18 131.1 27.5 100 2-101 78-181 (489)
93 PRK09584 tppB putative tripept 99.6 6.4E-13 1.4E-17 130.5 28.0 104 2-105 85-192 (500)
94 TIGR01272 gluP glucose/galacto 99.6 3.2E-12 6.8E-17 117.8 28.5 275 23-366 5-298 (310)
95 KOG2615 Permease of the major 99.6 6.9E-13 1.5E-17 119.3 20.7 116 1-116 94-216 (451)
96 TIGR00806 rfc RFC reduced fola 99.6 4E-13 8.6E-18 126.4 20.0 117 1-118 88-207 (511)
97 TIGR01301 GPH_sucrose GPH fami 99.5 1.2E-11 2.5E-16 119.2 26.6 341 1-388 69-476 (477)
98 TIGR00805 oat sodium-independe 99.5 4.4E-13 9.6E-18 134.8 17.3 116 1-116 94-283 (633)
99 COG0738 FucP Fucose permease [ 99.5 6.5E-11 1.4E-15 108.0 28.2 303 1-375 74-401 (422)
100 PRK09669 putative symporter Ya 99.5 2.6E-11 5.7E-16 117.8 27.5 107 253-359 274-389 (444)
101 KOG3764 Vesicular amine transp 99.5 6.8E-13 1.5E-17 120.1 14.8 113 1-113 132-246 (464)
102 TIGR00788 fbt folate/biopterin 99.4 6.8E-12 1.5E-16 122.3 19.4 305 4-360 94-415 (468)
103 PRK11462 putative transporter; 99.4 3E-10 6.4E-15 110.7 28.5 108 1-108 75-198 (460)
104 PF13347 MFS_2: MFS/sugar tran 99.4 1.8E-10 3.9E-15 111.4 26.4 289 1-358 67-384 (428)
105 PRK10429 melibiose:sodium symp 99.4 1.7E-10 3.6E-15 113.1 26.2 108 251-358 274-393 (473)
106 COG2807 CynX Cyanate permease 99.4 4E-10 8.8E-15 101.4 25.9 307 1-383 73-385 (395)
107 PRK10642 proline/glycine betai 99.4 2.8E-12 6E-17 126.2 12.0 136 1-137 312-458 (490)
108 COG2270 Permeases of the major 99.4 6.3E-10 1.4E-14 102.4 26.1 321 4-390 88-435 (438)
109 PLN00028 nitrate transmembrane 99.3 8.9E-10 1.9E-14 107.9 23.1 183 193-387 32-223 (476)
110 PF03825 Nuc_H_symport: Nucleo 99.3 2E-08 4.4E-13 95.5 30.9 137 250-386 250-398 (400)
111 COG2211 MelB Na+/melibiose sym 99.3 5.9E-09 1.3E-13 98.8 26.8 333 1-402 78-454 (467)
112 TIGR00880 2_A_01_02 Multidrug 99.2 3E-10 6.4E-15 91.3 14.2 133 254-386 9-141 (141)
113 TIGR02332 HpaX 4-hydroxyphenyl 99.2 1.5E-09 3.2E-14 104.4 20.1 182 196-388 7-194 (412)
114 TIGR01299 synapt_SV2 synaptic 99.2 8.8E-10 1.9E-14 111.8 18.8 137 249-386 208-357 (742)
115 PRK11551 putative 3-hydroxyphe 99.2 1.6E-09 3.4E-14 104.1 19.2 140 248-387 55-194 (406)
116 TIGR00710 efflux_Bcr_CflA drug 99.2 1.3E-09 2.8E-14 103.7 18.5 143 247-389 44-186 (385)
117 PRK09848 glucuronide transport 99.2 2.3E-08 4.9E-13 97.4 27.0 106 253-358 274-388 (448)
118 TIGR00895 2A0115 benzoate tran 99.2 9.3E-10 2E-14 104.9 17.0 138 250-387 59-196 (398)
119 PRK10473 multidrug efflux syst 99.2 1.8E-09 3.9E-14 103.1 18.6 142 248-389 43-184 (392)
120 PRK10213 nepI ribonucleoside t 99.2 4.2E-09 9.1E-14 100.7 20.8 138 250-387 62-199 (394)
121 PRK15462 dipeptide/tripeptide 99.2 1E-07 2.2E-12 92.6 29.8 105 1-105 71-180 (493)
122 TIGR00880 2_A_01_02 Multidrug 99.2 3.9E-10 8.4E-15 90.6 11.2 116 1-116 24-141 (141)
123 PRK10054 putative transporter; 99.2 3E-09 6.4E-14 101.8 18.8 137 250-387 50-186 (395)
124 PF07690 MFS_1: Major Facilita 99.2 4.7E-09 1E-13 98.4 19.9 142 247-388 36-177 (352)
125 PRK11663 regulatory protein Uh 99.1 4.1E-09 8.8E-14 102.2 19.5 139 248-386 63-201 (434)
126 PRK10504 putative transporter; 99.1 5.6E-09 1.2E-13 102.3 20.5 180 197-387 10-189 (471)
127 PRK15462 dipeptide/tripeptide 99.1 3.5E-09 7.6E-14 102.6 18.6 168 201-379 13-185 (493)
128 TIGR00893 2A0114 d-galactonate 99.1 1.9E-09 4.2E-14 102.5 16.1 141 248-388 34-174 (399)
129 PRK03699 putative transporter; 99.1 1.3E-08 2.7E-13 97.5 21.7 131 250-380 49-180 (394)
130 PRK15402 multidrug efflux syst 99.1 7.1E-09 1.5E-13 99.6 19.6 139 250-388 55-193 (406)
131 PF01306 LacY_symp: LacY proto 99.1 1.2E-07 2.6E-12 89.1 26.9 144 250-393 266-410 (412)
132 PRK12307 putative sialic acid 99.1 8.3E-09 1.8E-13 99.7 19.9 119 249-367 59-177 (426)
133 TIGR00891 2A0112 putative sial 99.1 8.4E-09 1.8E-13 98.7 19.7 181 195-387 10-192 (405)
134 PRK15403 multidrug efflux syst 99.1 9E-09 2E-13 99.0 19.1 138 251-388 59-196 (413)
135 PRK03545 putative arabinose tr 99.1 1E-08 2.2E-13 97.9 19.1 137 251-387 52-188 (390)
136 TIGR00711 efflux_EmrB drug res 99.1 4.8E-09 1E-13 103.2 17.3 140 249-388 43-182 (485)
137 PRK03893 putative sialic acid 99.1 1.5E-08 3.2E-13 100.1 20.6 164 193-367 16-179 (496)
138 TIGR00900 2A0121 H+ Antiporter 99.1 1.8E-08 4E-13 94.8 20.1 136 247-382 38-178 (365)
139 TIGR00881 2A0104 phosphoglycer 99.0 2.4E-09 5.3E-14 101.3 12.9 140 248-387 35-175 (379)
140 PRK11102 bicyclomycin/multidru 99.0 9.5E-09 2.1E-13 97.6 16.3 139 250-388 33-171 (377)
141 PRK14995 methyl viologen resis 99.0 3.9E-08 8.4E-13 97.0 20.8 136 253-388 51-187 (495)
142 PRK11273 glpT sn-glycerol-3-ph 99.0 3.1E-08 6.7E-13 96.6 18.9 139 249-387 69-212 (452)
143 PRK11652 emrD multidrug resist 99.0 4.7E-08 1E-12 93.5 19.7 140 249-388 49-188 (394)
144 TIGR00924 yjdL_sub1_fam amino 99.0 3E-08 6.4E-13 97.1 18.6 173 201-381 14-190 (475)
145 PRK10091 MFS transport protein 99.0 2.3E-08 5E-13 95.2 17.5 140 249-388 44-183 (382)
146 TIGR00886 2A0108 nitrite extru 99.0 4E-08 8.7E-13 92.8 19.0 137 249-386 43-191 (366)
147 TIGR00903 2A0129 major facilit 99.0 2.4E-08 5.3E-13 94.3 17.3 137 250-387 33-169 (368)
148 KOG4686 Predicted sugar transp 99.0 1.5E-07 3.4E-12 81.9 19.7 123 256-382 313-442 (459)
149 TIGR00712 glpT glycerol-3-phos 98.9 3.8E-08 8.3E-13 95.5 17.1 140 248-387 66-210 (438)
150 TIGR00890 2A0111 Oxalate/Forma 98.9 2.3E-08 5E-13 94.5 15.1 140 246-386 41-180 (377)
151 PRK09874 drug efflux system pr 98.9 8.9E-08 1.9E-12 91.9 19.2 135 251-386 62-196 (408)
152 PRK11646 multidrug resistance 98.9 1.5E-07 3.3E-12 90.2 19.9 133 253-386 56-188 (400)
153 PRK15034 nitrate/nitrite trans 98.9 3.1E-07 6.6E-12 88.3 21.4 143 244-387 71-236 (462)
154 cd06174 MFS The Major Facilita 98.9 8.4E-08 1.8E-12 89.6 17.1 135 248-382 39-173 (352)
155 COG2271 UhpC Sugar phosphate p 98.9 4.6E-08 9.9E-13 90.2 13.8 144 244-387 65-210 (448)
156 TIGR00887 2A0109 phosphate:H+ 98.9 3.1E-07 6.7E-12 90.8 20.9 109 247-355 60-174 (502)
157 PRK11043 putative transporter; 98.9 3.1E-07 6.8E-12 88.0 20.2 139 248-386 46-184 (401)
158 PRK10207 dipeptide/tripeptide 98.9 1.2E-07 2.7E-12 92.9 17.6 119 257-375 64-186 (489)
159 COG2814 AraJ Arabinose efflux 98.9 3.4E-07 7.3E-12 85.2 19.1 139 246-384 51-189 (394)
160 KOG2563 Permease of the major 98.9 2.9E-07 6.3E-12 85.6 18.4 327 2-392 106-459 (480)
161 TIGR00879 SP MFS transporter, 98.8 6.7E-08 1.4E-12 94.4 14.7 140 247-387 75-220 (481)
162 PRK11195 lysophospholipid tran 98.8 3.9E-07 8.6E-12 87.1 19.4 134 249-387 44-177 (393)
163 TIGR00894 2A0114euk Na(+)-depe 98.8 1.1E-07 2.4E-12 93.0 15.9 136 251-386 84-222 (465)
164 PRK10489 enterobactin exporter 98.8 2.2E-07 4.9E-12 89.5 17.2 140 247-387 56-200 (417)
165 TIGR00892 2A0113 monocarboxyla 98.8 2.9E-07 6.2E-12 89.8 18.0 130 254-384 65-195 (455)
166 PRK09584 tppB putative tripept 98.8 4.3E-07 9.4E-12 89.5 19.0 117 260-376 74-194 (500)
167 PRK09556 uhpT sugar phosphate 98.8 1E-07 2.3E-12 93.3 14.4 137 249-385 70-214 (467)
168 PRK10406 alpha-ketoglutarate t 98.8 6.7E-07 1.5E-11 86.7 19.5 137 251-388 71-223 (432)
169 TIGR00898 2A0119 cation transp 98.8 1.9E-07 4.1E-12 92.4 15.4 135 248-386 132-266 (505)
170 PF05977 MFS_3: Transmembrane 98.8 1.1E-06 2.5E-11 86.3 20.1 136 251-386 53-193 (524)
171 KOG0255 Synaptic vesicle trans 98.7 2.1E-07 4.5E-12 92.5 14.9 133 251-387 126-258 (521)
172 PRK15075 citrate-proton sympor 98.7 8.8E-07 1.9E-11 85.9 19.0 98 256-353 69-174 (434)
173 PRK03633 putative MFS family t 98.7 1.3E-06 2.9E-11 83.1 19.5 112 246-357 44-155 (381)
174 PRK10077 xylE D-xylose transpo 98.7 3.9E-07 8.6E-12 89.5 16.1 138 249-387 61-218 (479)
175 TIGR00897 2A0118 polyol permea 98.7 6.6E-07 1.4E-11 85.9 17.2 114 247-360 52-170 (402)
176 PRK05122 major facilitator sup 98.7 9.1E-07 2E-11 84.7 18.0 125 247-371 55-187 (399)
177 TIGR00889 2A0110 nucleoside tr 98.7 6.7E-08 1.5E-12 93.1 9.3 116 1-116 277-405 (418)
178 TIGR00899 2A0120 sugar efflux 98.7 1.8E-06 3.8E-11 81.8 18.5 138 251-388 41-181 (375)
179 PRK09952 shikimate transporter 98.7 2.3E-06 4.9E-11 83.1 19.4 135 252-387 73-223 (438)
180 PRK09705 cynX putative cyanate 98.7 9.8E-07 2.1E-11 84.4 16.6 129 248-377 49-178 (393)
181 COG2223 NarK Nitrate/nitrite t 98.7 1.8E-06 4E-11 79.8 17.0 147 241-388 47-198 (417)
182 PF03092 BT1: BT1 family; Int 98.7 1.1E-05 2.3E-10 78.0 23.3 112 4-115 57-177 (433)
183 KOG3764 Vesicular amine transp 98.6 2E-07 4.4E-12 85.1 10.4 141 250-390 113-254 (464)
184 TIGR00885 fucP L-fucose:H+ sym 98.6 3.2E-06 6.8E-11 81.3 19.4 111 246-356 41-154 (410)
185 PF01770 Folate_carrier: Reduc 98.6 2.2E-05 4.7E-10 73.7 24.0 116 3-118 69-186 (412)
186 KOG2615 Permease of the major 98.6 2.1E-07 4.6E-12 84.5 10.1 104 253-357 78-181 (451)
187 PRK12382 putative transporter; 98.6 3.8E-06 8.2E-11 80.2 19.1 114 248-361 56-177 (392)
188 PRK06814 acylglycerophosphoeth 98.6 4.3E-06 9.4E-11 91.1 20.8 136 251-387 60-198 (1140)
189 PRK09528 lacY galactoside perm 98.6 1.7E-07 3.6E-12 90.5 8.8 116 1-116 288-406 (420)
190 PRK08633 2-acyl-glycerophospho 98.6 4.4E-06 9.5E-11 91.2 20.6 109 250-358 54-165 (1146)
191 PRK11010 ampG muropeptide tran 98.6 6.2E-06 1.4E-10 81.2 19.6 129 258-387 60-198 (491)
192 PF06609 TRI12: Fungal trichot 98.6 3.1E-06 6.7E-11 83.4 16.8 125 250-376 85-210 (599)
193 KOG2816 Predicted transporter 98.5 7.8E-05 1.7E-09 72.0 25.5 113 1-118 88-204 (463)
194 KOG2325 Predicted transporter/ 98.5 8.4E-06 1.8E-10 77.9 17.6 114 5-118 102-234 (488)
195 PRK15011 sugar efflux transpor 98.5 3E-05 6.4E-10 74.2 21.8 133 255-388 64-199 (393)
196 TIGR00883 2A0106 metabolite-pr 98.5 2.9E-06 6.2E-11 80.7 14.6 132 255-387 47-194 (394)
197 KOG1330 Sugar transporter/spin 98.5 2.3E-07 4.9E-12 86.5 6.5 143 251-393 76-219 (493)
198 TIGR00896 CynX cyanate transpo 98.5 6.4E-06 1.4E-10 77.6 16.4 124 248-373 40-165 (355)
199 PRK10133 L-fucose transporter; 98.5 2.7E-05 5.9E-10 75.5 21.1 144 201-355 30-176 (438)
200 TIGR00901 2A0125 AmpG-related 98.5 6.1E-06 1.3E-10 77.7 15.9 128 260-387 38-182 (356)
201 TIGR01301 GPH_sucrose GPH fami 98.5 1.9E-05 4.2E-10 76.5 19.4 141 247-387 43-222 (477)
202 PTZ00207 hypothetical protein; 98.4 3.2E-05 7E-10 76.7 20.4 125 259-385 77-207 (591)
203 TIGR00882 2A0105 oligosacchari 98.4 2.5E-05 5.4E-10 74.8 19.2 138 246-386 41-186 (396)
204 TIGR00806 rfc RFC reduced fola 98.4 5.5E-05 1.2E-09 72.2 19.2 129 253-383 72-203 (511)
205 COG3104 PTR2 Dipeptide/tripept 98.3 1.2E-05 2.5E-10 76.3 13.9 133 259-393 77-216 (498)
206 COG3104 PTR2 Dipeptide/tripept 98.3 0.00029 6.3E-09 67.0 22.7 110 2-111 89-203 (498)
207 KOG0254 Predicted transporter 98.3 1.6E-05 3.4E-10 78.9 14.9 138 247-387 93-233 (513)
208 PRK11902 ampG muropeptide tran 98.3 9.1E-05 2E-09 71.0 19.4 131 257-388 46-186 (402)
209 KOG0569 Permease of the major 98.3 1.7E-05 3.7E-10 76.3 13.8 133 253-388 70-209 (485)
210 PF03209 PUCC: PUCC protein; 98.1 0.0087 1.9E-07 56.0 29.1 73 31-103 92-166 (403)
211 KOG2532 Permease of the major 98.1 5.2E-05 1.1E-09 73.4 13.0 133 253-385 83-218 (466)
212 TIGR00805 oat sodium-independe 98.1 3.5E-05 7.7E-10 78.0 12.3 131 253-383 78-281 (633)
213 TIGR00902 2A0127 phenyl propri 98.1 0.00036 7.7E-09 66.5 18.3 120 250-371 46-167 (382)
214 PF03137 OATP: Organic Anion T 98.0 1E-06 2.2E-11 87.0 0.1 89 28-116 141-252 (539)
215 TIGR00792 gph sugar (Glycoside 98.0 0.00025 5.5E-09 68.7 15.9 138 250-387 42-198 (437)
216 KOG2816 Predicted transporter 98.0 8.9E-05 1.9E-09 71.6 12.3 138 253-393 72-209 (463)
217 KOG2504 Monocarboxylate transp 98.0 0.00015 3.3E-09 71.1 13.6 129 255-384 93-222 (509)
218 PRK11128 putative 3-phenylprop 97.9 0.0014 2.9E-08 62.5 18.5 138 246-386 42-181 (382)
219 COG0738 FucP Fucose permease [ 97.9 0.002 4.4E-08 59.8 18.2 141 249-389 54-217 (422)
220 PF00083 Sugar_tr: Sugar (and 97.9 5.5E-07 1.2E-11 87.7 -5.3 106 247-352 50-158 (451)
221 TIGR02718 sider_RhtX_FptX side 97.9 0.0015 3.2E-08 62.4 18.4 123 264-386 60-187 (390)
222 PF06813 Nodulin-like: Nodulin 97.8 0.00068 1.5E-08 59.8 13.3 132 249-383 43-182 (250)
223 KOG3098 Uncharacterized conser 97.8 0.018 4E-07 55.3 23.6 81 3-84 78-159 (461)
224 TIGR00788 fbt folate/biopterin 97.7 0.0015 3.2E-08 64.0 16.6 125 261-387 78-212 (468)
225 KOG2533 Permease of the major 97.6 0.00075 1.6E-08 65.8 12.0 140 249-388 87-232 (495)
226 PF02487 CLN3: CLN3 protein; 97.5 0.055 1.2E-06 51.1 23.0 103 9-116 93-198 (402)
227 KOG0252 Inorganic phosphate tr 97.5 0.0014 2.9E-08 61.8 12.0 95 249-343 90-191 (538)
228 PF01306 LacY_symp: LacY proto 97.5 0.005 1.1E-07 58.3 15.6 141 244-388 44-193 (412)
229 PRK09669 putative symporter Ya 97.5 0.0013 2.7E-08 64.1 12.2 136 250-385 52-206 (444)
230 COG0477 ProP Permeases of the 97.4 0.0013 2.9E-08 59.4 10.8 103 3-105 67-176 (338)
231 KOG3810 Micronutrient transpor 97.4 0.00097 2.1E-08 60.4 9.0 104 15-118 82-187 (433)
232 KOG3762 Predicted transporter 97.4 0.0019 4.1E-08 62.0 11.4 132 249-380 412-544 (618)
233 KOG3626 Organic anion transpor 97.4 0.0068 1.5E-07 61.0 15.8 89 29-117 238-346 (735)
234 PF13347 MFS_2: MFS/sugar tran 97.4 0.00083 1.8E-08 65.0 9.4 131 255-385 49-200 (428)
235 PF05631 DUF791: Protein of un 97.4 0.028 6E-07 51.8 18.2 115 1-116 95-219 (354)
236 PF11700 ATG22: Vacuole efflux 97.3 0.0024 5.3E-08 62.3 11.7 114 2-115 344-469 (477)
237 PRK11462 putative transporter; 97.3 0.014 3E-07 57.1 16.9 132 254-385 56-206 (460)
238 PRK10429 melibiose:sodium symp 97.2 0.011 2.4E-07 58.1 15.2 105 251-355 50-166 (473)
239 PRK09848 glucuronide transport 97.2 0.0048 1E-07 60.1 12.3 86 1-86 290-385 (448)
240 PF03825 Nuc_H_symport: Nucleo 97.1 0.067 1.4E-06 51.2 18.6 103 244-348 38-141 (400)
241 KOG0253 Synaptic vesicle trans 97.0 0.00088 1.9E-08 61.3 5.0 110 1-115 407-520 (528)
242 COG2211 MelB Na+/melibiose sym 96.9 0.034 7.4E-07 53.5 14.2 140 255-394 60-215 (467)
243 TIGR00769 AAA ADP/ATP carrier 96.8 0.31 6.8E-06 47.4 20.8 41 316-356 149-189 (472)
244 KOG2563 Permease of the major 96.6 0.053 1.2E-06 51.3 12.7 105 251-356 87-200 (480)
245 PF05631 DUF791: Protein of un 96.5 0.68 1.5E-05 42.9 20.8 133 256-389 82-222 (354)
246 KOG2325 Predicted transporter/ 96.4 0.094 2E-06 50.7 14.1 140 247-388 75-234 (488)
247 PF06963 FPN1: Ferroportin1 (F 96.4 0.95 2.1E-05 43.6 22.9 101 248-348 298-408 (432)
248 PF03092 BT1: BT1 family; Int 96.4 0.033 7.2E-07 53.9 11.2 130 260-390 41-182 (433)
249 KOG3762 Predicted transporter 96.4 0.0086 1.9E-07 57.7 6.6 110 2-111 433-544 (618)
250 PF00854 PTR2: POT family; In 96.3 0.019 4.2E-07 54.4 8.6 105 6-110 2-119 (372)
251 PF06813 Nodulin-like: Nodulin 96.2 0.084 1.8E-06 46.7 11.7 114 2-116 63-184 (250)
252 TIGR00926 2A1704 Peptide:H+ sy 96.2 0.26 5.5E-06 50.3 16.7 122 259-380 39-179 (654)
253 PF05978 UNC-93: Ion channel r 95.9 0.048 1E-06 44.4 7.8 84 2-86 64-148 (156)
254 COG2270 Permeases of the major 95.8 0.036 7.7E-07 52.1 7.7 116 1-116 314-431 (438)
255 TIGR00926 2A1704 Peptide:H+ sy 95.5 0.18 3.8E-06 51.4 11.9 109 1-109 50-177 (654)
256 PF05978 UNC-93: Ion channel r 95.4 0.6 1.3E-05 38.0 12.7 101 251-352 45-145 (156)
257 KOG0637 Sucrose transporter an 95.2 0.66 1.4E-05 44.3 13.7 91 1-95 97-207 (498)
258 TIGR01272 gluP glucose/galacto 95.1 0.16 3.4E-06 46.9 9.6 75 314-388 28-119 (310)
259 PF03209 PUCC: PUCC protein; 95.0 0.56 1.2E-05 44.2 12.6 79 314-392 107-187 (403)
260 PF07672 MFS_Mycoplasma: Mycop 94.2 2.6 5.6E-05 37.3 14.1 56 58-113 1-61 (267)
261 COG0477 ProP Permeases of the 94.0 0.81 1.8E-05 40.9 11.5 104 253-356 49-156 (338)
262 PF03219 TLC: TLC ATP/ADP tran 93.3 8.9 0.00019 37.7 18.3 42 316-357 164-205 (491)
263 KOG4332 Predicted sugar transp 92.8 4.2 9.2E-05 36.2 12.9 81 2-85 99-185 (454)
264 PF01770 Folate_carrier: Reduc 92.4 9.8 0.00021 36.3 16.0 125 261-386 59-185 (412)
265 KOG1237 H+/oligopeptide sympor 91.6 16 0.00035 36.7 23.2 117 2-120 101-249 (571)
266 PF12832 MFS_1_like: MFS_1 lik 91.0 3.8 8.2E-05 28.8 9.0 37 244-280 36-72 (77)
267 PF02487 CLN3: CLN3 protein; 90.8 1.2 2.6E-05 42.3 8.1 64 23-86 330-394 (402)
268 TIGR00939 2a57 Equilibrative N 90.7 17 0.00037 35.2 23.5 36 315-350 391-426 (437)
269 TIGR00769 AAA ADP/ATP carrier 89.9 21 0.00045 35.0 21.7 37 50-86 152-188 (472)
270 KOG4686 Predicted sugar transp 87.8 2.8 6.1E-05 37.7 7.6 109 2-111 327-440 (459)
271 COG2807 CynX Cyanate permease 86.6 28 0.00062 32.6 15.9 132 247-380 51-183 (395)
272 PF00854 PTR2: POT family; In 83.9 7.8 0.00017 36.6 9.4 67 315-381 52-121 (372)
273 PF13000 Acatn: Acetyl-coenzym 80.4 20 0.00043 35.1 10.4 23 365-387 203-225 (544)
274 PRK03612 spermidine synthase; 77.9 79 0.0017 31.6 14.7 41 331-371 144-185 (521)
275 KOG3098 Uncharacterized conser 77.3 31 0.00067 33.6 10.8 99 253-352 60-158 (461)
276 PF03219 TLC: TLC ATP/ADP tran 76.9 80 0.0017 31.2 17.1 37 52-88 169-205 (491)
277 PF06779 DUF1228: Protein of u 72.9 32 0.0007 24.7 7.4 48 247-294 31-78 (85)
278 KOG3880 Predicted small molecu 72.4 15 0.00031 33.7 6.7 78 9-86 323-401 (409)
279 PF01733 Nucleoside_tran: Nucl 67.4 2 4.4E-05 39.5 0.4 35 315-349 267-301 (309)
280 PRK10697 DNA-binding transcrip 66.9 11 0.00023 29.0 4.1 52 87-138 31-88 (118)
281 KOG2881 Predicted membrane pro 66.9 92 0.002 27.6 11.2 27 258-284 255-281 (294)
282 PF06341 DUF1056: Protein of u 66.8 10 0.00022 25.3 3.4 42 21-62 21-62 (63)
283 PF06963 FPN1: Ferroportin1 (F 62.2 1.6E+02 0.0034 28.6 20.4 52 330-381 147-198 (432)
284 TIGR02978 phageshock_pspC phag 57.1 30 0.00064 26.8 5.0 36 84-119 23-64 (121)
285 PF04024 PspC: PspC domain; I 51.0 17 0.00036 24.2 2.5 32 87-118 26-61 (61)
286 KOG3626 Organic anion transpor 47.4 82 0.0018 32.7 7.8 44 315-358 605-649 (735)
287 PF01528 Herpes_glycop: Herpes 46.5 1.1E+02 0.0023 29.0 7.8 47 52-98 259-307 (374)
288 KOG1479 Nucleoside transporter 45.7 2.8E+02 0.0061 26.6 17.0 44 309-353 355-399 (406)
289 KOG3574 Acetyl-CoA transporter 42.8 47 0.001 31.6 4.8 31 261-291 81-117 (510)
290 COG5336 Uncharacterized protei 42.0 1E+02 0.0022 23.2 5.5 51 327-377 37-89 (116)
291 PF11947 DUF3464: Protein of u 40.4 1.7E+02 0.0036 23.8 7.0 80 265-344 56-142 (153)
292 KOG3880 Predicted small molecu 40.3 3.1E+02 0.0067 25.5 11.7 96 13-113 100-198 (409)
293 PF10183 ESSS: ESSS subunit of 35.5 61 0.0013 24.3 3.8 30 89-118 56-86 (105)
294 COG4708 Predicted membrane pro 32.1 67 0.0015 25.5 3.5 32 243-274 134-165 (169)
295 PF13428 TPR_14: Tetratricopep 31.2 77 0.0017 19.0 3.1 23 119-141 10-32 (44)
296 PF11151 DUF2929: Protein of u 30.9 1.6E+02 0.0034 19.3 6.6 47 71-117 10-56 (57)
297 KOG0637 Sucrose transporter an 30.6 1.7E+02 0.0037 28.6 6.6 38 312-349 158-196 (498)
298 PF06645 SPC12: Microsomal sig 30.6 73 0.0016 22.3 3.2 33 67-102 12-44 (76)
299 COG3202 ATP/ADP translocase [E 29.8 5.6E+02 0.012 25.4 20.8 35 53-87 174-208 (509)
300 COG5336 Uncharacterized protei 29.6 1.4E+02 0.003 22.5 4.5 21 261-281 60-81 (116)
301 COG3202 ATP/ADP translocase [E 28.5 5.9E+02 0.013 25.2 19.5 42 316-357 168-209 (509)
302 TIGR00939 2a57 Equilibrative N 27.4 91 0.002 30.3 4.4 61 26-86 370-431 (437)
303 KOG4332 Predicted sugar transp 24.4 5.1E+02 0.011 23.6 7.9 18 261-278 90-107 (454)
304 PHA02902 putative IMV membrane 24.1 1.3E+02 0.0029 20.0 3.3 14 384-397 33-46 (70)
305 KOG2513 Protein required for m 24.0 3.3E+02 0.0072 27.5 7.4 16 107-122 587-602 (647)
306 PF01350 Flavi_NS4A: Flaviviru 21.5 2.5E+02 0.0055 22.4 5.0 28 366-393 99-127 (144)
307 PF01733 Nucleoside_tran: Nucl 20.7 36 0.00079 31.2 0.3 60 26-85 246-306 (309)
308 PF06779 DUF1228: Protein of u 20.6 3.3E+02 0.0072 19.5 6.5 41 66-106 30-70 (85)
No 1
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=8.7e-52 Score=363.78 Aligned_cols=380 Identities=38% Similarity=0.610 Sum_probs=319.4
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcchhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEA 80 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~ 80 (408)
+.|||+.+.+..+.-++...+.+.++|+..+.++|.+.|+|.|+.++..++..|+.|..+|+..+-.. .+|.+|.+..+
T Consensus 139 ~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea 217 (528)
T KOG0253|consen 139 TIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGGLPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEA 217 (528)
T ss_pred hhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCCccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHH
Confidence 36999999999999999999999999999999999999999999888888889999999999988777 99999999999
Q ss_pred HHHhHhccccchHHHHHHhhHHHHHHHHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCCCCcccc
Q 015377 81 ALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEE 160 (408)
Q Consensus 81 ~l~~~~~~~~~Wr~~f~i~~i~~~~~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (408)
.+++.++...||||.....+.|..+...+.+++||||||++.+|+.+||.+.++++++.|+...|...+....+++.+++
T Consensus 218 ~law~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e 297 (528)
T KOG0253|consen 218 LLAWGVMSNFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQE 297 (528)
T ss_pred HHHHHHHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhh
Confidence 99999999999999999889999998999999999999999999999999999999999998888766654443333222
Q ss_pred cCCCCCccccccccccccccccccchhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc----
Q 015377 161 FSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILL---- 236 (408)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---- 236 (408)
..+ ..+.+. +..|+.......+++|+++|+++++|.++++|.+.||+..++...+.+.-..|+.....
T Consensus 298 ~~~------~~~~~~--~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e 369 (528)
T KOG0253|consen 298 ESD------LDDSKS--SAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTE 369 (528)
T ss_pred hhc------hhhhhh--ccccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhH
Confidence 111 111111 11122223456889999999999999999999999999999988776544333332110
Q ss_pred --c---cCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhh
Q 015377 237 --S---ENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSM 311 (408)
Q Consensus 237 --~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (408)
. -...+..-|.+.++.++.++||.++.+++.||+|||+.+..++++++++.+.+....+......+++...+|..
T Consensus 370 ~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafis 449 (528)
T KOG0253|consen 370 LETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFIS 449 (528)
T ss_pred HHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHh
Confidence 0 01223445889999999999999999999999999999999999999988887776666666677888888888
Q ss_pred hhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCCccc
Q 015377 312 GTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGKEL 391 (408)
Q Consensus 312 ~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~~~~ 391 (408)
+.+...|+|++|+|||.+|++|.|.|.+++++|++++|++. +....+...+..+++.+++++++.+.++|-|||||.+
T Consensus 450 g~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEtkGR~l 527 (528)
T KOG0253|consen 450 GAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIETKGRSL 527 (528)
T ss_pred chheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeeccCCCCC
Confidence 99999999999999999999999999999999999999987 3443445688999999999999999999999999975
No 2
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.2e-42 Score=326.06 Aligned_cols=363 Identities=22% Similarity=0.338 Sum_probs=268.5
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhh---hhhHHHHHHHHHHhhccCCcchh-hhHHHhhhcCCCcchhHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAF---SPNYISLLILRGLAGAGLGSGHV-FFSWFMEFVPPSNRGKWMVVFSTFWTFGS 76 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~R~l~Gi~~g~~~~-~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~ 76 (408)
+.|||.++.++.++..++++++.+ .+++++++++|++.|+..|.... ...|+.|++|++.||....+.+.+..+|.
T Consensus 86 ~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ 165 (485)
T KOG0569|consen 86 RFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGI 165 (485)
T ss_pred hhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHH
Confidence 479999999999999888877655 58899999999999999998754 45589999999999999999999999999
Q ss_pred HHHHHHHh--HhccccchHHHHHHhhHHHHHHHHHHHhccCcchhHhh-cCChhhHHHHHHHHHHHcCCCCCCCCccCCC
Q 015377 77 VSEAALAW--IVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCT-KGRITDAHNILDKIAQFNQTSLPSGNLTSDG 153 (408)
Q Consensus 77 ~l~~~l~~--~~~~~~~Wr~~f~i~~i~~~~~~~~~~~lpESp~~l~~-~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~ 153 (408)
+++..++. .+++...|++.+.+..+|+++.+....++||||+||.. |||.+||++.+++++..++.+.
T Consensus 166 ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~--------- 236 (485)
T KOG0569|consen 166 LLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEA--------- 236 (485)
T ss_pred HHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchh---------
Confidence 99977764 34577889999999999999999999999999999999 8999999999999975432110
Q ss_pred CCCcccccCCCCCccccccccccccccccccchhhhcc-chhhHHHHHHHHHHHHH------HHHHHHHHHHHHHhhhcc
Q 015377 154 TNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRFFKTTILLWVLYFG------NSFVYYGIVLLASELSGS 226 (408)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~~ 226 (408)
+.+++.++.+++ +..+++..++.+.+ ++++|+...+...+.+. +.+.+|+..++..
T Consensus 237 --~~e~~~~e~~~~----------~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~----- 299 (485)
T KOG0569|consen 237 --EIEEMLREIEEE----------ELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKT----- 299 (485)
T ss_pred --HHHHHHHHHHHh----------ccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHH-----
Confidence 011100000000 00011112344444 45666665544444443 3345565555432
Q ss_pred CCCCCcccccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh---hhhh---HH--
Q 015377 227 QSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT---LQSN---IL-- 298 (408)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~---~~~~---~~-- 298 (408)
.+ -......+. +...+...++.++++.++.||.|||++++.+...+.++.+.+.. ..+. +.
T Consensus 300 aG----------~~~~~a~~a-n~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y 368 (485)
T KOG0569|consen 300 AG----------FTPEEAQYA-NLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSY 368 (485)
T ss_pred cC----------CCHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 10 011122333 34446677899999999999999999999887777665443321 1111 11
Q ss_pred --HHHHHHHHHHHhhhhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHH
Q 015377 299 --LTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSV 376 (408)
Q Consensus 299 --~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~ 376 (408)
....+.....+..|..+++|.+.+|++|++.|+.+.+++..+.|+.+++..+.++++.+..|. ..|+++.+.+++..
T Consensus 369 ~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~ 447 (485)
T KOG0569|consen 369 LCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFL 447 (485)
T ss_pred HHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHH
Confidence 122223334456788899999999999999999999999999999999999999988887765 67888999999999
Q ss_pred HHHHhcccccCCccccccccccccc
Q 015377 377 VVILLIPFETKGKELVNTIDGVSNS 401 (408)
Q Consensus 377 ~~~~~~~~et~~~~~~~~~~~~~~~ 401 (408)
+..++..||||||+..|+.++.+..
T Consensus 448 i~~~~~lPETkgr~~~eI~~~~~~~ 472 (485)
T KOG0569|consen 448 IYLYRYLPETKGRTPYEIIEELEKR 472 (485)
T ss_pred HHHHHhCcccCCCCHHHHHHHHHhC
Confidence 9999999999999999999876543
No 3
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=5.4e-42 Score=343.18 Aligned_cols=389 Identities=25% Similarity=0.411 Sum_probs=279.5
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 79 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 79 (408)
|.|||++++++.+++.++++++++++++..++++|++.|++.|+. ++...+++|++|+++||+..++.+.++.+|.+++
T Consensus 228 R~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila 307 (742)
T TIGR01299 228 KLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYA 307 (742)
T ss_pred HhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 579999999999999999999999999999999999999999876 5667789999999999999999999999999999
Q ss_pred HHHHhHhcc-------------ccchHHHHHHhhHHHHHHHHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCC
Q 015377 80 AALAWIVMP-------------ILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPS 146 (408)
Q Consensus 80 ~~l~~~~~~-------------~~~Wr~~f~i~~i~~~~~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~ 146 (408)
+.+++.+.+ ..+||+++++.++|.++.++.++++||||+|+..+||.+||.+.++++++.|.+....
T Consensus 308 ~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~ 387 (742)
T TIGR01299 308 AAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGH 387 (742)
T ss_pred HHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCc
Confidence 988766543 2469999999999988888888899999999999999999999999998776532110
Q ss_pred --CCccC---CCCCCcccccCCCCCcc--ccccccccccccccccchhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 015377 147 --GNLTS---DGTNDLDEEFSTSEETP--LLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLL 219 (408)
Q Consensus 147 --~~~~~---~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (408)
..... +...+.++..+..+... ..+............+..+..+++++++++++++|.+++...+.||++..|
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w 467 (742)
T TIGR01299 388 PEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVW 467 (742)
T ss_pred hhHHHHHHHHHHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 00000000000000000 000000000001112234567889999999999999999999999999999
Q ss_pred HHhhhccC---C--------------------------------------------------------------------
Q 015377 220 ASELSGSQ---S-------------------------------------------------------------------- 228 (408)
Q Consensus 220 ~~~l~~~~---~-------------------------------------------------------------------- 228 (408)
.|.+.... .
T Consensus 468 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (742)
T TIGR01299 468 FPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFK 547 (742)
T ss_pred HHHHHHHHHHHHHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhh
Confidence 99763110 0
Q ss_pred CCCccccc--------c-------------------------cCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHH
Q 015377 229 KCSSSILL--------S-------------------------ENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLS 275 (408)
Q Consensus 229 ~~~~~~~~--------~-------------------------~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~ 275 (408)
.|...... . ........+...++.+++.++|.+++++++||+|||++
T Consensus 548 ~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~ 627 (742)
T TIGR01299 548 NCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRM 627 (742)
T ss_pred ccchhhhhccccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH
Confidence 00000000 0 00001134666777788999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHH
Q 015377 276 MTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGL 355 (408)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l 355 (408)
++.+.++.+++++.+....+......+.++..++..+.++..+.+++|++|++.|+++.|++++.+++|++++|++.+.+
T Consensus 628 l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L 707 (742)
T TIGR01299 628 LAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSF 707 (742)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98887777776655544333222222223333344456678889999999999999999999999999999999998876
Q ss_pred hhhcchhhHHHHHHHHHHHHHHHHHhcccccCCccc
Q 015377 356 VTSCHQTAAILLLEALIVLSVVVILLIPFETKGKEL 391 (408)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~~~~ 391 (408)
... +...++++++++.++++++.+++ |||+++.+
T Consensus 708 ~~~-~~~~pf~i~a~~lll~~ll~~~L-PET~~~~l 741 (742)
T TIGR01299 708 VGI-TKAAPILFASAALACGGLLALKL-PDTRGQVL 741 (742)
T ss_pred HHh-hhHHHHHHHHHHHHHHHHHHHhC-CCCccccc
Confidence 654 34567778888888887777766 79999865
No 4
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=1.1e-39 Score=321.03 Aligned_cols=371 Identities=22% Similarity=0.295 Sum_probs=249.1
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhh------HHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPN------YISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWT 73 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~ 73 (408)
|.|||+++.++.+++.+++++++++++ +..++++|++.|++.|.. +....|++|++|+++||+.+++.+.++.
T Consensus 82 ~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~ 161 (502)
T TIGR00887 82 KLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQG 161 (502)
T ss_pred hhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHH
Confidence 579999999999999999999988876 789999999999999986 4567789999999999999999999999
Q ss_pred HHHHHHHHHHhHhcc-----------------------ccchHHHHHHhhHHHHHHHHHHHhccCcchhHhhcCChh-hH
Q 015377 74 FGSVSEAALAWIVMP-----------------------ILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRIT-DA 129 (408)
Q Consensus 74 ~G~~l~~~l~~~~~~-----------------------~~~Wr~~f~i~~i~~~~~~~~~~~lpESp~~l~~~~~~~-~a 129 (408)
+|.++++.++..+.. .++||+++.++++|+++..+.++++||||+|+..|+|.+ ++
T Consensus 162 ~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a 241 (502)
T TIGR00887 162 FGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQA 241 (502)
T ss_pred HHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHH
Confidence 999998887765321 247999999999999888888889999999999998875 47
Q ss_pred HHHHHHHHHHcCCCCCCCCccCCCCCCcccccCCCCCccccccccccccccccccchhhhccc----hhhHHHHHHHHHH
Q 015377 130 HNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFS----PRFFKTTILLWVL 205 (408)
Q Consensus 130 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 205 (408)
++.+++.++.+..+ + .++.++..++ + + ..+ ..++++++ +++++.++.++..
T Consensus 242 ~~~~~~~~~~~~~~---~------~~~~~~~~~~--~--------~---~~~---~~~~~l~~~~~~~~~~~~~~~~~~~ 296 (502)
T TIGR00887 242 ASDMSAVLQVKIEA---E------PDEVEKASTA--V--------E---VPK---ASWSDFFTHFFKWRHGKHLLGTAGS 296 (502)
T ss_pred HHHHHHHhcccccc---C------cccccchhcc--c--------c---chh---hhHHHHHHHHhhhHHHHHHHHHHHH
Confidence 76676665321110 0 0000000000 0 0 000 02233332 2333444444555
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCcccccc-cCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHH
Q 015377 206 YFGNSFVYYGIVLLASELSGSQSKCSSSILLS-ENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVC 284 (408)
Q Consensus 206 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~ 284 (408)
++.+.+.+|+...+.|.+....+......... ....-........+..++.++|.++.++++||+|||+.++.+..+.+
T Consensus 297 ~~~~~~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~ 376 (502)
T TIGR00887 297 WFLLDIAFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILT 376 (502)
T ss_pred HHHHHHHHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHH
Confidence 66667788887776665543221110000000 00000011112334445677899999999999999999877665555
Q ss_pred HHHHHHHhhh---h-hHHHHHHHHHHHHHhhhhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhc-
Q 015377 285 IFLLPLVTLQ---S-NILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSC- 359 (408)
Q Consensus 285 ~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~- 359 (408)
+++..+.... + ............++..+..+..|.+++|++|++.|+++.|+++.+++++++++|.+.+.+.+..
T Consensus 377 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~ 456 (502)
T TIGR00887 377 VLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGD 456 (502)
T ss_pred HHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhcccc
Confidence 4433332211 1 1111111122222234556778899999999999999999999999999999999998877632
Q ss_pred ---------chhhHHHHHHHHHHHHHHHHHhcccccCCccccccccc
Q 015377 360 ---------HQTAAILLLEALIVLSVVVILLIPFETKGKELVNTIDG 397 (408)
Q Consensus 360 ---------~~~~~~~~~~~~~~i~~~~~~~~~~et~~~~~~~~~~~ 397 (408)
+....+.+++++++++.+.. ++.||||+++++|+.++
T Consensus 457 ~~~~~~~~~~~~~~~~i~~~~~~~~~i~~-~~lpEt~~~~leei~~~ 502 (502)
T TIGR00887 457 PTKGYPTGIWMGHVLEIFALFMFLGILFT-LLIPETKGKSLEELSGE 502 (502)
T ss_pred ccccccccccchHHHHHHHHHHHHHHHHh-eEeccCCCCCHHhhhCC
Confidence 22356788888888776654 56689999999887543
No 5
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=1e-36 Score=300.70 Aligned_cols=349 Identities=34% Similarity=0.592 Sum_probs=263.0
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 79 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 79 (408)
|.|||++++++.++..++++++++++|++.++++|++.|++.|.. +....++.|++|+++|++..++.+.++.+|.+++
T Consensus 153 r~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~ 232 (505)
T TIGR00898 153 RFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLL 232 (505)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHH
Confidence 579999999999999999999999999999999999999999885 5667788999999999999999999999999999
Q ss_pred HHHHhHhccccchHHHHHHhhHHHHHHHHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCCCCccc
Q 015377 80 AALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDE 159 (408)
Q Consensus 80 ~~l~~~~~~~~~Wr~~f~i~~i~~~~~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (408)
+.+++.+. +||+.+++.+++.++..+..+++||||+|+..++|.+++++.+++.++.|+.+.+.+.. +.
T Consensus 233 ~~~~~~~~---~wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~--------~~ 301 (505)
T TIGR00898 233 PLVAYFIP---DWRWLQLAVSLPTFLFFLLSWFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVL--------SL 301 (505)
T ss_pred HHHHHHhh---HHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHH--------hh
Confidence 98887764 49999999999988877777889999999999999999999999998876542211000 00
Q ss_pred ccCCCCCccccccccccccccccccchhhhcc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccccc
Q 015377 160 EFSTSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSE 238 (408)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 238 (408)
+.+++ . +.+ + +....++++ +++.++.++..+..++...+.+|+...+.+.+.
T Consensus 302 ---~~~~~-----~-~~~---~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 354 (505)
T TIGR00898 302 ---SLEKD-----L-SSS---K-KQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGNLG-------------- 354 (505)
T ss_pred ---hhhhh-----h-hhc---c-CCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHhccccccC--------------
Confidence 00000 0 000 0 001233444 466666676677777777777877665544221
Q ss_pred CccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhh--HHHHHHHHHHHHHhhhhhhh
Q 015377 239 NVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSN--ILLTALLSGARMFSMGTFII 316 (408)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 316 (408)
.+.+...++.++..+++.++.++++||+|||+.+..+.++.++.++.+....+. ...........++..+.++.
T Consensus 355 ----~~~~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (505)
T TIGR00898 355 ----GNIYLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQM 430 (505)
T ss_pred ----CChHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 224556667778889999999999999999999988777766655444433222 22222333333444455677
Q ss_pred hhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCCcccccc
Q 015377 317 ANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGKELVNT 394 (408)
Q Consensus 317 ~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~~~~~~~ 394 (408)
.+.+.+|++|++.|+++.|+.++++++|++++|++.+ +.+ .+...++.+++++.+++.+..+++ |||++++++|+
T Consensus 431 ~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~l-pet~~~~l~~t 505 (505)
T TIGR00898 431 VYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGE-KWLFLPLVLFGGLALLAGILTLFL-PETKGVPLPET 505 (505)
T ss_pred HHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHH-HHHhhHHHHHHHHHHHHHHHHHcC-cCCCCCCCCCC
Confidence 8899999999999999999999999999999999887 433 345677888888888887776655 69999999874
No 6
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=1.1e-35 Score=292.81 Aligned_cols=367 Identities=22% Similarity=0.332 Sum_probs=257.3
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcch-hhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 79 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 79 (408)
+.|||++++++.+++.++++++++++|+.+++++|++.|+|.|... +...|.+|.+|++.||...+..+..+.+|.+++
T Consensus 115 ~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~ 194 (513)
T KOG0254|consen 115 RIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLG 194 (513)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHH
Confidence 3699999999999999999999999999999999999999999875 556689999999999999999999999999999
Q ss_pred HHHHhHhccc-cchHHHHHHhhHHHHHHHHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCCCCcc
Q 015377 80 AALAWIVMPI-LTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLD 158 (408)
Q Consensus 80 ~~l~~~~~~~-~~Wr~~f~i~~i~~~~~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (408)
..+++...+. ++||+++++..+|+++..+..+++||||+||.++||.++|++.+++++..++.+. +.+.+
T Consensus 195 ~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~---------~~~~~ 265 (513)
T KOG0254|consen 195 YCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDV---------EVELE 265 (513)
T ss_pred HHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcch---------HHHHH
Confidence 7777765433 5899999999999999877788999999999999999999999999875321100 00000
Q ss_pred cccCCCCCccccccccccccccccccchhhhccchhhHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhccCCCCCcccccc
Q 015377 159 EEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSF-VYYGIVLLASELSGSQSKCSSSILLS 237 (408)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~ 237 (408)
+.. .+ . ..+.....++ ....+++.++.+++..+...+...+.+ .+....++.+.+....
T Consensus 266 ~~~----~~-~---~~~~~~~~~~--~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~---------- 325 (513)
T KOG0254|consen 266 LLK----IK-L---LVEAEVAEGK--ASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSA---------- 325 (513)
T ss_pred HHH----HH-H---HHhhhccccc--ccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhc----------
Confidence 000 00 0 0000000000 023345556677767654444333222 2111112222222110
Q ss_pred cCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh---hh-h--------hHHH-HHHHH
Q 015377 238 ENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT---LQ-S--------NILL-TALLS 304 (408)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~---~~-~--------~~~~-~~~~~ 304 (408)
.... +.....++.++..+++++++.++.||+|||+.++.+.....++++.+.. .. . .+.. ...+.
T Consensus 326 -g~~~-~~~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (513)
T KOG0254|consen 326 -GLKS-DTFLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCL 403 (513)
T ss_pred -CCCC-chHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHH
Confidence 1111 1145556667778889999999999999999999877666554443321 11 0 1111 11222
Q ss_pred HHHHHhhhhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHH-HHHhcc
Q 015377 305 GARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVV-VILLIP 383 (408)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~-~~~~~~ 383 (408)
....+..+..+++|.+.+|+||.+.|+++.+++..+++..+++.....+.+....+....+.+++..+.+... .++++.
T Consensus 404 ~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~ 483 (513)
T KOG0254|consen 404 FIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFV 483 (513)
T ss_pred HHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEEc
Confidence 2233445667899999999999999999999999999998877776666555443224567777777777777 789999
Q ss_pred cccCCcccccccccc
Q 015377 384 FETKGKELVNTIDGV 398 (408)
Q Consensus 384 ~et~~~~~~~~~~~~ 398 (408)
|||||++++|+.+.-
T Consensus 484 pETkg~sleei~~~~ 498 (513)
T KOG0254|consen 484 PETKGLTLEEINELF 498 (513)
T ss_pred ccCCCCcHHHHHHHH
Confidence 999999999988743
No 7
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=1.3e-34 Score=286.54 Aligned_cols=361 Identities=32% Similarity=0.460 Sum_probs=270.2
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 79 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 79 (408)
+.|||++++.+.++..++++++++++|++.+++.|+++|++.++. .+...+++|+.++++|+.+.++....+..|.+..
T Consensus 144 ~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~~~~~~ 223 (521)
T KOG0255|consen 144 RFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTLGGFFFVGGLMLP 223 (521)
T ss_pred hcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhhheeecCcchhhHHHHHHHHHHHHHHHHH
Confidence 369999999999999999999999999999999999999998876 4667788999999999999999666666666666
Q ss_pred HHHHhHhccccchHHHHHHhhHHHHHHHHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCCCCccc
Q 015377 80 AALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDE 159 (408)
Q Consensus 80 ~~l~~~~~~~~~Wr~~f~i~~i~~~~~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (408)
+..+++. .+|||.+++..+|+++.++.++..||||||+..+||.++|.+.++++++.|+.+....+. .+.
T Consensus 224 ~~~a~~~---~~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~-------~~~ 293 (521)
T KOG0255|consen 224 AGAAYIT---RDWRWLFWIISIPSGLFLLLWFLPPESPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKEL-------LRL 293 (521)
T ss_pred HHHHHHH---hhHHHHHHHHHHHHHHHHHHHHccCcChHHHHHcCchHHHHHHHHHHHhhcCCCCCcHHH-------HHH
Confidence 5566655 399999999999998887777777799999999999999999999999877433211100 000
Q ss_pred ccCCCCCccccccccccccccccccchhhhcc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccccc
Q 015377 160 EFSTSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSE 238 (408)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 238 (408)
.. ..+ ..+. ...++...+.+++ .++.++.++.+++.++...+.||+..+....+
T Consensus 294 ~~---~~~-----~~~~--~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~~~~~l--------------- 348 (521)
T KOG0255|consen 294 EL---LLR-----PLKL--LFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSLNVSGL--------------- 348 (521)
T ss_pred HH---Hhh-----Hhhh--hccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhhhhhhc---------------
Confidence 00 000 0000 0000111234444 45688888888888888888999887655432
Q ss_pred CccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhh-hH--HHHHHHHHHHHHhhhhhh
Q 015377 239 NVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQS-NI--LLTALLSGARMFSMGTFI 315 (408)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~ 315 (408)
..+.+.+..+.+....++....+...|+.|||.....+.....+.++....... .. .......++.++....+.
T Consensus 349 ---g~~~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (521)
T KOG0255|consen 349 ---GGNIYLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFN 425 (521)
T ss_pred ---CchHHHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHH
Confidence 245677777777789999999999999999999998887777766555444221 11 233344444555555566
Q ss_pred hhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCCccccccc
Q 015377 316 IANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGKELVNTI 395 (408)
Q Consensus 316 ~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~~~~~~~~ 395 (408)
..+.+++|++|+.+|+++.+.++.+++++++++|.+...... ......+.+++....+.+++..++.|||++++++|+.
T Consensus 426 ~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~lpet~~~~l~~t~ 504 (521)
T KOG0255|consen 426 LIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ-MFPLLGLILFGWLALLLGLLSLLLLPETKGKPLPGTL 504 (521)
T ss_pred HHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcccchHHHHHHHHHHHHHHHHhcCcccCCCCCchhH
Confidence 779999999999999999999999999999999987643322 3333444456888888888887888999999999988
Q ss_pred ccccc
Q 015377 396 DGVSN 400 (408)
Q Consensus 396 ~~~~~ 400 (408)
++.++
T Consensus 505 ~~~~~ 509 (521)
T KOG0255|consen 505 LDAEN 509 (521)
T ss_pred HHHHh
Confidence 88774
No 8
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=100.00 E-value=4e-42 Score=334.48 Aligned_cols=360 Identities=29% Similarity=0.502 Sum_probs=252.0
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhh---hHHHHHHHHHHhhccCCcch-hhhHHHhhhcCCCcchhHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSP---NYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGS 76 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~R~l~Gi~~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~ 76 (408)
+.|||++++++.++..+++++.++++ |+..+.++|++.|++.|... +...|+.|.+|+++||+..++.+.++.+|.
T Consensus 72 ~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~ 151 (451)
T PF00083_consen 72 RYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGI 151 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 57999999999999999999999999 99999999999999999874 566789999999999999999999999999
Q ss_pred HHHHHHHhHhccc---cchHHHHHHhhHHHHHHHHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCC
Q 015377 77 VSEAALAWIVMPI---LTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDG 153 (408)
Q Consensus 77 ~l~~~l~~~~~~~---~~Wr~~f~i~~i~~~~~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~ 153 (408)
+++..+++...+. ++||+.+.+..+|+++..+..+++||||+||.+|||.|||++.++++++.+..+
T Consensus 152 ~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~---------- 221 (451)
T PF00083_consen 152 LLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIED---------- 221 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccceeccccccccccccccccccccccc----------
Confidence 9998887765433 459999999999998887888899999999999999999999998854331111
Q ss_pred CCCcccccCCCCCccccccccccccccccccchhhhccch-hhHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhccCCCCC
Q 015377 154 TNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSP-RFFKTTILLWVLYFGNSF-VYYGIVLLASELSGSQSKCS 231 (408)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~ 231 (408)
++.+++.++.++.+ ..+ ...++++++ +++++..........+.. .++....+.+.+....+
T Consensus 222 -~~~~~~~~~~~~~~----------~~~---~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~--- 284 (451)
T PF00083_consen 222 -EEIEEIKAEKKESQ----------ESK---ASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAG--- 284 (451)
T ss_pred -cccccccccccccc----------ccc---eeeeeccccccccccccccccccccccccccccccccccccccccc---
Confidence 01111111000000 000 122334433 233444333323222222 22222223333321110
Q ss_pred cccccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH---h--hhh----hHHHHHH
Q 015377 232 SSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLV---T--LQS----NILLTAL 302 (408)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~---~--~~~----~~~~~~~ 302 (408)
.. .+ +....+..+..+++.+++.+++||+|||+.++.+...++++...+. . ..+ .......
T Consensus 285 --------~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 354 (451)
T PF00083_consen 285 --------IS-NS-FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVF 354 (451)
T ss_pred --------cc-cc-ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccee
Confidence 00 01 2233344566677888888999999999998887766655444332 1 111 1111111
Q ss_pred HHHH-HHHhhhhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHh
Q 015377 303 LSGA-RMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILL 381 (408)
Q Consensus 303 ~~~~-~~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 381 (408)
.... ..+..+..+..+.+++|+||++.|+++.|+++.++++++++.|.+.+.+.+..+....+.+++++++++.++.++
T Consensus 355 ~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~ 434 (451)
T PF00083_consen 355 LALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYF 434 (451)
T ss_pred eeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHhheeE
Confidence 1111 222335567888999999999999999999999999999999988887766555456788888888999999999
Q ss_pred cccccCCccccccccc
Q 015377 382 IPFETKGKELVNTIDG 397 (408)
Q Consensus 382 ~~~et~~~~~~~~~~~ 397 (408)
+.|||||++++|++++
T Consensus 435 ~lpET~g~~l~ei~~~ 450 (451)
T PF00083_consen 435 FLPETKGKTLEEIQEM 450 (451)
T ss_pred EEeeCCCCCHHHHHhh
Confidence 9999999999998764
No 9
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=4.7e-32 Score=265.88 Aligned_cols=336 Identities=15% Similarity=0.172 Sum_probs=216.9
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHH--------HHHHHHHhhccCCcch-hhhHHHhhhcCCCcchhHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYIS--------LLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTF 71 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~--------l~~~R~l~Gi~~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~ 71 (408)
|.|||+++.++.++++++++++++++|+.+ ++++|+++|++.|+.. +...+++|++|+++||+..++.+.+
T Consensus 83 r~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~ 162 (490)
T PRK10642 83 KYGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFG 162 (490)
T ss_pred hcccHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHH
Confidence 579999999999999999999999999975 8999999999999874 5677899999999999999999988
Q ss_pred HHHHHHHHHHHHhHhc--------cccchHHHHHHhhHHHHHHHHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCC
Q 015377 72 WTFGSVSEAALAWIVM--------PILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTS 143 (408)
Q Consensus 72 ~~~G~~l~~~l~~~~~--------~~~~Wr~~f~i~~i~~~~~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~ 143 (408)
..+|.++++.+...+. +.++||++|++.+++.++.++.+..+||||+|+..+++.++.. + +
T Consensus 163 ~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~~----------~-~ 231 (490)
T PRK10642 163 SIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGD----------R-E 231 (490)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhhc----------c-c
Confidence 8888888876654331 3679999999988777766666778999999864332211100 0 0
Q ss_pred CCCCCccCCCCCCcccccCCCCCccccccccccccccccccchhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015377 144 LPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASEL 223 (408)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 223 (408)
..+ + + .+ ..+++++++ +++.+...+...+.....+|+...|.|.+
T Consensus 232 ------------~~~----~-~--------------~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 276 (490)
T PRK10642 232 ------------GLQ----D-G--------------PK---VSFKEIATK-HWRSLLTCIGLVIATNVTYYMLLTYMPSY 276 (490)
T ss_pred ------------ccc----c-c--------------cc---CCHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 0 0 00 011222222 33444444444444556677777666654
Q ss_pred hccCCCCCcccccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH-HHh--hhhhHHHH
Q 015377 224 SGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLP-LVT--LQSNILLT 300 (408)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~-~~~--~~~~~~~~ 300 (408)
..... +..............++.+++.++.++++||+|||+.+..+.+...+.... +.. ..+.....
T Consensus 277 l~~~~----------g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (490)
T PRK10642 277 LSHNL----------HYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIF 346 (490)
T ss_pred HHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH
Confidence 32110 011111122233345667788889999999999999887665433322211 111 11111111
Q ss_pred HHHHHHHHHhhhhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcc-hhhHHHHHHHHHHHHHHHH
Q 015377 301 ALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH-QTAAILLLEALIVLSVVVI 379 (408)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~-~~~~~~~~~~~~~i~~~~~ 379 (408)
.......++..+.......+.+|++|++.|+++.|+.++++++++.++|.+.+++.+..+ ...+..+..+.++++.+..
T Consensus 347 ~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~ 426 (490)
T PRK10642 347 AGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITG 426 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHH
Confidence 111111122222334556677899999999999999999999989999999887776543 2344455556666666655
Q ss_pred HhcccccCCccccc
Q 015377 380 LLIPFETKGKELVN 393 (408)
Q Consensus 380 ~~~~~et~~~~~~~ 393 (408)
+++ |||+++.+++
T Consensus 427 ~~~-pes~~~~~~~ 439 (490)
T PRK10642 427 VTM-KETANRPLKG 439 (490)
T ss_pred HHh-ccccCCCCCC
Confidence 554 7998876653
No 10
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=5.4e-32 Score=265.38 Aligned_cols=357 Identities=22% Similarity=0.274 Sum_probs=231.8
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhh------------hhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFS------------PNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVV 67 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~------------~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~ 67 (408)
|.|||++++++.+++.+++++++++ +++..++++|+++|++.|.. +....+++|++|+++||+.+++
T Consensus 81 r~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~ 160 (479)
T PRK10077 81 RFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSF 160 (479)
T ss_pred HhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHH
Confidence 5799999999999999888887763 33678899999999999986 4567789999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhHhc--------cccchHHHHHHhhHHHHHHHHHHHhccCcchhHhhcCChhhHHHHHHHHHHH
Q 015377 68 FSTFWTFGSVSEAALAWIVM--------PILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQF 139 (408)
Q Consensus 68 ~~~~~~~G~~l~~~l~~~~~--------~~~~Wr~~f~i~~i~~~~~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~ 139 (408)
.+.+..+|.++++.++..+. +..+||+.|++.+++.++..+..+++||||+|+..+++.+++++.+++..+.
T Consensus 161 ~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~ 240 (479)
T PRK10077 161 NQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGN 240 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCC
Confidence 99999999999887765442 3568999999998888777777788999999999999988888777665321
Q ss_pred cCCCCCCCCccCCCCCCcccccCCCCCccccccccccccccccccchhhhccchhhHHHHHHH--HHHHHHHHHHHHHHH
Q 015377 140 NQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILL--WVLYFGNSFVYYGIV 217 (408)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 217 (408)
+.. ++..++ ..+..+++ +. .....+. ........ ....+.+...++...
T Consensus 241 ~~~---------------~~~~~~-----~~~~~~~~----~~---~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (479)
T PRK10077 241 TLA---------------TQALQE-----IKHSLDHG----RK---TGGKLLM--FGVGVIVIGVMLSVFQQFVGINVVL 291 (479)
T ss_pred hhH---------------HHHHHH-----HHHHHHHh----hh---hhhhhcc--hhHHHHHHHHHHHHHHHHhChhHHH
Confidence 100 000000 00000000 00 0000010 00011111 111112222233333
Q ss_pred HHHHhhhccCCCCCcccccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh--hh
Q 015377 218 LLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL--QS 295 (408)
Q Consensus 218 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~--~~ 295 (408)
.+.|.+....+ ..............+..+++.+++++++||+|||+.++.+.+...+....+... .+
T Consensus 292 ~~~p~i~~~~g-----------~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~ 360 (479)
T PRK10077 292 YYAPEIFKTLG-----------ASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQ 360 (479)
T ss_pred HHHHHHHHHcC-----------CCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 34444332111 111111233334556778899999999999999999988776655544333221 11
Q ss_pred -hH-HHH-HHHHHHHHHhhhhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHh------hhcchhhHHH
Q 015377 296 -NI-LLT-ALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLV------TSCHQTAAIL 366 (408)
Q Consensus 296 -~~-~~~-~~~~~~~~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~------~~~~~~~~~~ 366 (408)
.. ... ........+.....+..+.+.+|++|++.|+++.|++++++++++++++.+.+.+. +..+....+.
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 440 (479)
T PRK10077 361 APGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYW 440 (479)
T ss_pred cccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHH
Confidence 11 111 11111111212223567889999999999999999999999999999887776443 2334456677
Q ss_pred HHHHHHHHHHHHHHhcccccCCccccccccc
Q 015377 367 LLEALIVLSVVVILLIPFETKGKELVNTIDG 397 (408)
Q Consensus 367 ~~~~~~~i~~~~~~~~~~et~~~~~~~~~~~ 397 (408)
++++.++++.++.+++.||||+++++|..+.
T Consensus 441 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 471 (479)
T PRK10077 441 IYGCMGVLAALFMWKFVPETKGKTLEEMEAL 471 (479)
T ss_pred HHHHHHHHHHHHHHhccccCCCCCHHHHHHH
Confidence 8888888888888888999999999887554
No 11
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-34 Score=261.55 Aligned_cols=368 Identities=22% Similarity=0.307 Sum_probs=254.1
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhh-------HHHHHHHHHHhhccCCcch-hhhHHHhhhcCCCcchhHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPN-------YISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFW 72 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~-------~~~l~~~R~l~Gi~~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~ 72 (408)
+.|||+++...+++..++++++++... ..++...|++.|+|+|+.+ ...+.++|.+-+++||...+......
T Consensus 110 ~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Q 189 (538)
T KOG0252|consen 110 KFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQ 189 (538)
T ss_pred hhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEec
Confidence 479999999999999999998887532 4679999999999999985 55667899999999999998777777
Q ss_pred HHHHHHHHHHHhHhc-------cc--------cchHHHHHHhhHHHHHHHHHHHhccCcchhHhhcC-ChhhHHHHHHHH
Q 015377 73 TFGSVSEAALAWIVM-------PI--------LTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKG-RITDAHNILDKI 136 (408)
Q Consensus 73 ~~G~~l~~~l~~~~~-------~~--------~~Wr~~f~i~~i~~~~~~~~~~~lpESp~~l~~~~-~~~~a~~~l~~~ 136 (408)
..|.+.+..++.++. +. .-||..+.+..+|+++.++.++.+|||++|..... |.++|.+ +.
T Consensus 190 g~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~~---d~ 266 (538)
T KOG0252|consen 190 GFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAAG---DM 266 (538)
T ss_pred chhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhhh---cc
Confidence 777777666655531 11 13999999999999999999999999999984332 3233321 11
Q ss_pred HHHcCCCCCCCCccCCCCCCcccccCCCCCccccccccccccccccccchhhhccchhhHHHHHHHHHHHHHHHHHHHHH
Q 015377 137 AQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGI 216 (408)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (408)
.++.+. +++++.+..+ .....++....+...+...+-++.+.....||...+.+|+.
T Consensus 267 ----~k~~~~---------~~~~~~~~~~----------~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~ 323 (538)
T KOG0252|consen 267 ----KKVLSV---------DIEAESTAES----------DVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQ 323 (538)
T ss_pred ----cccccc---------ccchhhcccc----------CCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Confidence 111000 0111000000 00011111111222222234455555666777888999999
Q ss_pred HHHHHhhhccCCCCCcccccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhh
Q 015377 217 VLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSN 296 (408)
Q Consensus 217 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~ 296 (408)
.++...+.+..+..+..... ...-...-.+.++..+..+||.+++..++|++||+...+.++++.+++.+.+....++
T Consensus 324 nL~~s~I~~~ig~~~~~~~~--~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~ 401 (538)
T KOG0252|consen 324 NLFQSVIFSAIGVIPSANTY--HELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQ 401 (538)
T ss_pred ccHHHHHHHhhccCCCcchH--HHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCccc
Confidence 99888776533322211100 0000011234455567778899999999999999999999998888877766554331
Q ss_pred -----HHHHHHHHHHHHHhhhhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhh-----hcchhhHHH
Q 015377 297 -----ILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVT-----SCHQTAAIL 366 (408)
Q Consensus 297 -----~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~-----~~~~~~~~~ 366 (408)
...+...+..++...|++....++.+|.||+++|++..|++.++|++|++++.+.+.++.+ ..+....+.
T Consensus 402 ~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~ 481 (538)
T KOG0252|consen 402 LENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFI 481 (538)
T ss_pred ccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHH
Confidence 1122233344455678888899999999999999999999999999999999988888877 455556788
Q ss_pred HHHHHHHHHHHHHHhcccccCCccccccccc
Q 015377 367 LLEALIVLSVVVILLIPFETKGKELVNTIDG 397 (408)
Q Consensus 367 ~~~~~~~i~~~~~~~~~~et~~~~~~~~~~~ 397 (408)
+++.+++++.+..+++ ||||+|+++|+.++
T Consensus 482 i~~~~~~~gi~~T~l~-pEtk~~~leei~~e 511 (538)
T KOG0252|consen 482 ILAGCMLLGILFTLLI-PETKGKSLEEISNE 511 (538)
T ss_pred HHHHHHHHhHheeEEe-ecccccCHHHhcCh
Confidence 8888888887766666 59999999997554
No 12
>PRK09952 shikimate transporter; Provisional
Probab=99.97 E-value=5.7e-29 Score=240.66 Aligned_cols=323 Identities=18% Similarity=0.193 Sum_probs=206.2
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHH--------HHHHHHHHhhccCCcch-hhhHHHhhhcCCCcchhHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYI--------SLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTF 71 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~R~l~Gi~~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~ 71 (408)
|.|||+++..+.++++++++++++++|+. .++++|+++|++.|... ....++.|+.|+++||+..+..+.+
T Consensus 90 r~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g 169 (438)
T PRK09952 90 RLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVG 169 (438)
T ss_pred hhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHH
Confidence 57999999999999999999999999987 59999999999999874 5567889999999999999999999
Q ss_pred HHHHHHHHHHHHhHhc--------cccchHHHHHHhhHHHHHHHHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCC
Q 015377 72 WTFGSVSEAALAWIVM--------PILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTS 143 (408)
Q Consensus 72 ~~~G~~l~~~l~~~~~--------~~~~Wr~~f~i~~i~~~~~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~ 143 (408)
+.+|.+++..+...+. ..++||++|++.+++.++....+...||||+|..++++.+++
T Consensus 170 ~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~~~~-------------- 235 (438)
T PRK09952 170 YGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQAAA-------------- 235 (438)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhcccc--------------
Confidence 9999988876655432 257999999999988776666677789999875322111000
Q ss_pred CCCCCccCCCCCCcccccCCCCCccccccccccccccccccchhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015377 144 LPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASEL 223 (408)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 223 (408)
++ +.+ ..+.++ ++++.........+.....+|....|.+..
T Consensus 236 --------------~~------~~~-----------------~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 276 (438)
T PRK09952 236 --------------KK------RIP-----------------VIEALL--RHPGAFLKIIALRLCELLTMYIVTAFALNY 276 (438)
T ss_pred --------------cc------cCC-----------------HHHHHH--HchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 000 000011 111112222223333444555555444433
Q ss_pred hccCCCCCcccccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh---hhhhHHHH
Q 015377 224 SGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT---LQSNILLT 300 (408)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 300 (408)
.... .+.+.........+..+..+++..+.++++||+|||+.+..+.++..+....... ..+.....
T Consensus 277 ~~~~----------~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (438)
T PRK09952 277 STQN----------LGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIV 346 (438)
T ss_pred HHHh----------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHH
Confidence 2110 0011111111222334556778889999999999999887665544333222211 11112111
Q ss_pred H-HHHHHHHHhhhhhhhhhhhcccccCCchhhHHHhHHHHhhh-HhHhhHHHHHHHHhhhc-c-hhhHHHHHHHHHHHHH
Q 015377 301 A-LLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGR-IGGMVCPLVAVGLVTSC-H-QTAAILLLEALIVLSV 376 (408)
Q Consensus 301 ~-~~~~~~~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~-~~~~~~p~~~~~l~~~~-~-~~~~~~~~~~~~~i~~ 376 (408)
. ......+......+..+.+.+|.+|++.|+++.|+.+.++. +++.++|.+.+.+.+.. + ...++.+.+++.+++.
T Consensus 347 ~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~ 426 (438)
T PRK09952 347 FFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISA 426 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHH
Confidence 1 11221222223345678889999999999999999998876 78999999998887743 2 2345555666666666
Q ss_pred HHHHhcccccC
Q 015377 377 VVILLIPFETK 387 (408)
Q Consensus 377 ~~~~~~~~et~ 387 (408)
+..+.. +||+
T Consensus 427 v~~~~~-~~~~ 436 (438)
T PRK09952 427 MTALLM-KDNQ 436 (438)
T ss_pred HHHHHc-cccc
Confidence 665554 5644
No 13
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.97 E-value=1.3e-29 Score=247.82 Aligned_cols=366 Identities=21% Similarity=0.302 Sum_probs=233.6
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhh---hhHHHHHHHHHHhhccCCcch-hhhHHHhhhcCCCcchhHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFS---PNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGS 76 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~R~l~Gi~~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~ 76 (408)
|.|||++++++.+++.++.+++++. .+++.++++|++.|++.|... ....++.|++|+++|++.++.++.+..+|.
T Consensus 97 ~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~ 176 (481)
T TIGR00879 97 RFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGI 176 (481)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHH
Confidence 5799999999999999999888554 345589999999999998764 456788999999999999999999999999
Q ss_pred HHHHHHH---hHhccccchHHHHHHhhHHHHHHHHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCC
Q 015377 77 VSEAALA---WIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDG 153 (408)
Q Consensus 77 ~l~~~l~---~~~~~~~~Wr~~f~i~~i~~~~~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~ 153 (408)
.+++.++ ....+..+||+.|++.+++.++..+..+++||+|+++..+++.+++++..++..+.+..+
T Consensus 177 ~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 246 (481)
T TIGR00879 177 LVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGED---------- 246 (481)
T ss_pred HHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCc----------
Confidence 9999988 444567799999999877777777777889999999988888777666554432211000
Q ss_pred CCCcccccCCCCCccccccccccccccccccchhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcc
Q 015377 154 TNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSS 233 (408)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 233 (408)
.+..+.....+.. ........+..+......+++..++........++.+...+.....+.+.+....+
T Consensus 247 -~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----- 315 (481)
T TIGR00879 247 -KELLDELELIDIK-----RSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAG----- 315 (481)
T ss_pred -HHHHHHHHHHHHH-----HHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcC-----
Confidence 0000000000000 00000000001111111111111222222222222222222222333333321111
Q ss_pred cccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH---hh-hh------hHH-HHHH
Q 015377 234 ILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLV---TL-QS------NIL-LTAL 302 (408)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~---~~-~~------~~~-~~~~ 302 (408)
..............+..+++.+++++++||+|||+.+..+..+..+.+..+. .. .. ... ....
T Consensus 316 ------~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (481)
T TIGR00879 316 ------VSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFI 389 (481)
T ss_pred ------CCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHH
Confidence 1111122334445567788999999999999999988776555544433332 11 11 111 1111
Q ss_pred HHHHHHHhhhhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhc
Q 015377 303 LSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLI 382 (408)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 382 (408)
......+..+..+..+.+.+|.+|++.|+++.|+.+.+.+++++++|.+.+.+.+..+....+.++++++++++++.+++
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~ 469 (481)
T TIGR00879 390 LLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFF 469 (481)
T ss_pred HHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHhee
Confidence 22222222333456677889999999999999999999999999999998887776666667788888888888888888
Q ss_pred ccccCCccccc
Q 015377 383 PFETKGKELVN 393 (408)
Q Consensus 383 ~~et~~~~~~~ 393 (408)
.||+|+++.+|
T Consensus 470 ~~~~~~~~~~~ 480 (481)
T TIGR00879 470 LPETKGRTLEE 480 (481)
T ss_pred cccCCCCChhh
Confidence 89999887654
No 14
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.97 E-value=3.4e-28 Score=235.13 Aligned_cols=319 Identities=19% Similarity=0.231 Sum_probs=200.0
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHH--------HHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYI--------SLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTF 71 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~ 71 (408)
|.|||+++..+.+++.++++++++++++. .++++|+++|++.|+. +....+++|+.|+++||+..++.+.+
T Consensus 89 r~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~ 168 (432)
T PRK10406 89 KHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVT 168 (432)
T ss_pred hcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHH
Confidence 68999999999999999999999999875 5999999999999986 45677899999999999999998888
Q ss_pred HHHHHHHHHHHHhHhc--------cccchHHHHHHhhHHHHHHHHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCC
Q 015377 72 WTFGSVSEAALAWIVM--------PILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTS 143 (408)
Q Consensus 72 ~~~G~~l~~~l~~~~~--------~~~~Wr~~f~i~~i~~~~~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~ 143 (408)
...|.++++.+...+. +.++||++|++.+++.++..+.+..+||+|++..++ ..
T Consensus 169 ~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~~~~-----------------~~- 230 (432)
T PRK10406 169 LIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDETSQQETRA-----------------LK- 230 (432)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCCchHHHhh-----------------hc-
Confidence 8888888776644432 257999999999998887777777789987642000 00
Q ss_pred CCCCCccCCCCCCcccccCCCCCccccccccccccccccccchhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015377 144 LPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASEL 223 (408)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 223 (408)
+. .+++++++ +++.........+.....+|+...|.|..
T Consensus 231 ---------------------~~------------------~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~lp~~ 269 (432)
T PRK10406 231 ---------------------EA------------------GSLKGLWR--NRRAFIMVLGFTAAGSLCFYTFTTYMQKY 269 (432)
T ss_pred ---------------------cc------------------ccHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 00111111 12222222233333455666666666654
Q ss_pred hccCCCCCcccccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH--hh--hhhHHH
Q 015377 224 SGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLV--TL--QSNILL 299 (408)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~--~~--~~~~~~ 299 (408)
.... .+.+.........+..+...++..+.++++||+|||+.+..+..+..+...+.. .. .+....
T Consensus 270 l~~~----------~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (432)
T PRK10406 270 LVNT----------AGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAA 339 (432)
T ss_pred HHHh----------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHH
Confidence 3211 001111111222233344566777889999999999887665444333222211 11 111211
Q ss_pred HHHHHHHHHHhhhhhhhhhhhcccccCCchhhHHHhHHHHhhhH-hHhhHHHHHHHHhhhcchhh-HHHHHHHHHHHHHH
Q 015377 300 TALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRI-GGMVCPLVAVGLVTSCHQTA-AILLLEALIVLSVV 377 (408)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~-~~~~~p~~~~~l~~~~~~~~-~~~~~~~~~~i~~~ 377 (408)
..+.....+......+..+.+.+|.||++.|+++.|++++++++ .+...|.+... .+..+.+. .+++.+++.+++.+
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~-l~~~g~~~~~~~~~~~~~~i~~~ 418 (432)
T PRK10406 340 FGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALS-LKSIGMETAFFWYVTLMAVVAFL 418 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHH-HHHhCCCcHHHHHHHHHHHHHHH
Confidence 11121111111122345677889999999999999999999886 34457777664 44444333 34444555566665
Q ss_pred HHHhcccccCCccc
Q 015377 378 VILLIPFETKGKEL 391 (408)
Q Consensus 378 ~~~~~~~et~~~~~ 391 (408)
..+++ |+++|+.
T Consensus 419 ~~~~l--~~~~~~~ 430 (432)
T PRK10406 419 VSLML--HRKGKGM 430 (432)
T ss_pred HHHHh--hhccccc
Confidence 55553 6667654
No 15
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.96 E-value=4.7e-27 Score=221.34 Aligned_cols=309 Identities=17% Similarity=0.126 Sum_probs=199.0
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcchhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEA 80 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~ 80 (408)
|.|||+.++.+.+....+.+.....+|+..++++|+++|++.|........++|+.|+++|++++++.+.+..+|.++++
T Consensus 52 r~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~ 131 (368)
T TIGR00903 52 RAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAALGQPFLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFAL 131 (368)
T ss_pred HccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhHhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57999887665554444433334447999999999999999886544555568999999999999999999999999999
Q ss_pred HHHhHhccccchHHHHHHhhHHHHHH-HHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCCCCccc
Q 015377 81 ALAWIVMPILTWRWLLALSAIPAFVL-LIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDE 159 (408)
Q Consensus 81 ~l~~~~~~~~~Wr~~f~i~~i~~~~~-~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (408)
+++..+.+..+||+.|++.++++++. ++.++++||+|++. ++..+.++
T Consensus 132 ~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p~~~---~~~~~~~~---------------------------- 180 (368)
T TIGR00903 132 AAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALPFQA---AEGFGFKD---------------------------- 180 (368)
T ss_pred HHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCCCCC---CCCcchHH----------------------------
Confidence 99988888899999999977766554 55677899998742 00000000
Q ss_pred ccCCCCCccccccccccccccccccchhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccC
Q 015377 160 EFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSEN 239 (408)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 239 (408)
.. +++++++++ +..+..+..++.....+|++..|.|.+..+.+
T Consensus 181 ---------~~--------------~~~~~ll~~---~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g----------- 223 (368)
T TIGR00903 181 ---------AV--------------KEFGALAGR---KDLWIIGAILGFGVALFDNLAIWLEAALRPAG----------- 223 (368)
T ss_pred ---------HH--------------HHHHHHHcC---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----------
Confidence 00 011122221 12233445566667777888888876653211
Q ss_pred ccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchH---HHHHH-HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhh
Q 015377 240 VQDASVYINVFITSFAELPGLLTAALLVDRVGRK---LSMTI-MFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFI 315 (408)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (408)
.+ .. ......+..+.|.+..++++||..|| +.... ......+.+..+....+............++..+.++
T Consensus 224 ~s-~~---~~~~~~l~~~~g~~g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 299 (368)
T TIGR00903 224 LE-DI---AGDAVALAILAGLIGVAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAYA 299 (368)
T ss_pred CC-hH---HHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhHH
Confidence 00 01 11122333344555668888887543 33222 2222222222222222222222233333334445556
Q ss_pred hhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcc
Q 015377 316 IANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIP 383 (408)
Q Consensus 316 ~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 383 (408)
..+.+.+|.+|++.|+++.|+.++.++++++++|.+.+.+.. +....|.++++..+++.+...+++
T Consensus 300 ~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~~~~~ 365 (368)
T TIGR00903 300 IIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIALLLP 365 (368)
T ss_pred HHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHhCC
Confidence 678899999999999999999999999999999988876663 445667788888888877765443
No 16
>PRK15075 citrate-proton symporter; Provisional
Probab=99.95 E-value=3.2e-25 Score=214.45 Aligned_cols=323 Identities=16% Similarity=0.228 Sum_probs=193.1
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHH--------HHHHHHHHhhccCCcch-hhhHHHhhhcCCCcchhHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYI--------SLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTF 71 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~R~l~Gi~~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~ 71 (408)
|.|||+.++.+.+++.++++++++++++. .++++|+++|++.|... ....+++|++|+++||+.+++.+..
T Consensus 82 r~Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~ 161 (434)
T PRK15075 82 RVGRRKGLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSAS 161 (434)
T ss_pred hhchHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHH
Confidence 57999999999999999999999999987 47999999999998764 4567899999999999999998888
Q ss_pred HHHHHHHHHHHHhHh--------ccccchHHHHHHhhHHHHHHHHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCC
Q 015377 72 WTFGSVSEAALAWIV--------MPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTS 143 (408)
Q Consensus 72 ~~~G~~l~~~l~~~~--------~~~~~Wr~~f~i~~i~~~~~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~ 143 (408)
..+|..+++.++..+ .+..+||++|++..++.++..+.....||++++...++ +
T Consensus 162 ~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~-----------------~- 223 (434)
T PRK15075 162 QQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPFIFLIRRSLEETEEFLARKH-----------------R- 223 (434)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhh-----------------c-
Confidence 888877777666554 24679999999876554333333444555443210000 0
Q ss_pred CCCCCccCCCCCCcccccCCCCCccccccccccccccccccchhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015377 144 LPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASEL 223 (408)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 223 (408)
.+. ++ .++.. .+.++.........+.+...++....|.|.+
T Consensus 224 --------------------~~~--------------~~---~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 264 (434)
T PRK15075 224 --------------------PSM--------------RE---IFRSL--AANWRIVLAGMLMVAMTTVSFYLITVYTPTF 264 (434)
T ss_pred --------------------ccc--------------cc---HHHHH--HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 00 00000 1112222222223333444555666666654
Q ss_pred hccCCCCCcccccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH-HH-h-hhhhH-HH
Q 015377 224 SGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLP-LV-T-LQSNI-LL 299 (408)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~-~~-~-~~~~~-~~ 299 (408)
..+.- +.+............+.++++.+++++++||+|||+.+..+.......... .. . ..... ..
T Consensus 265 l~~~~----------g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (434)
T PRK15075 265 GKTVL----------HLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARM 334 (434)
T ss_pred HHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHH
Confidence 32110 011111223334455677889999999999999999877654433222111 11 1 11111 11
Q ss_pred HHHHHHHHHHhhhhhhhhhhhcccccCCchhhHHHhHHHHhhhH-hHhhHHHHHHHHhhhcchh---hHHHHHHHHHHHH
Q 015377 300 TALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRI-GGMVCPLVAVGLVTSCHQT---AAILLLEALIVLS 375 (408)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~-~~~~~p~~~~~l~~~~~~~---~~~~~~~~~~~i~ 375 (408)
........++.....+..+.+.+|.+|++.|+++.|+.++++.. ++.++|.+.+.+.+..+.. ..+++++.+ +
T Consensus 335 ~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~~~~~~~~~~~~~---~ 411 (434)
T PRK15075 335 LAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDKAAPGYWLSFAAV---C 411 (434)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCchHHHHHHHHHHH---H
Confidence 11111111222222344567789999999999999999888876 5888999988887765532 112233222 2
Q ss_pred HHHHHhcccccCCccccc
Q 015377 376 VVVILLIPFETKGKELVN 393 (408)
Q Consensus 376 ~~~~~~~~~et~~~~~~~ 393 (408)
..+..+...+.++..++.
T Consensus 412 ~~~~~~~~~~~~~~~~~~ 429 (434)
T PRK15075 412 GLIATLVLYRRRGARLQA 429 (434)
T ss_pred HHHHHHHhccccchhhhh
Confidence 223333444666665554
No 17
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.95 E-value=2.3e-25 Score=215.13 Aligned_cols=330 Identities=19% Similarity=0.221 Sum_probs=203.7
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 79 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 79 (408)
|.|||+++.++.++..++.++.++++++..++++|++.|++.|.. +....++.|+.|+++|++..++.+.+..+|.+++
T Consensus 79 r~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~ 158 (426)
T PRK12307 79 KFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIA 158 (426)
T ss_pred HhCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHH
Confidence 579999999999999999999999999999999999999998875 4556678999999999999999999999999999
Q ss_pred HHHHhHhccccchHHHHHHhhHHHHHHHHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCCCCccc
Q 015377 80 AALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDE 159 (408)
Q Consensus 80 ~~l~~~~~~~~~Wr~~f~i~~i~~~~~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (408)
+.+...+.+..+||+.|++..++.++........||++++...+.+ .+ . ++
T Consensus 159 ~~l~~~l~~~~~w~~~f~i~~~~~~~~~~~~~~~p~~~~~~~~~~~----------------~~--~-----------~~ 209 (426)
T PRK12307 159 AYFMPSFAEAYGWRAAFFVGLLPVLLVIYIRARAPESKEWEEAKLS----------------GK--G-----------KH 209 (426)
T ss_pred HHHHHHHcccCCHHHHHHHHHHHHHHHHHHHHHCCCChHHHHhhhh----------------cc--c-----------cc
Confidence 8887777778899999998776665555555567887765311000 00 0 00
Q ss_pred ccCCCCCccccccccccccccccccchhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccC
Q 015377 160 EFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSEN 239 (408)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 239 (408)
++... . . .....+..++++..+.........+......+....+.|......+
T Consensus 210 --~~~~~----~-------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----------- 262 (426)
T PRK12307 210 --SQSAW----S-------V---FSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGEG----------- 262 (426)
T ss_pred --cccch----h-------h---hhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-----------
Confidence 00000 0 0 0001222333332222222222222111122222223332221110
Q ss_pred ccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhh-hhHHHH-HHHHHHHHHhhhhhhhh
Q 015377 240 VQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ-SNILLT-ALLSGARMFSMGTFIIA 317 (408)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~ 317 (408)
.+............++.+++.++.+++.||+|||+.+..+..+..+....+.... +..... ...+...+...+..+..
T Consensus 263 ~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (426)
T PRK12307 263 FDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLV 342 (426)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHH
Confidence 1111112223344567888999999999999999988777665544433332211 111111 11211112222333455
Q ss_pred hhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhh-HHHHHHHHHHHHHHHHHhccccc
Q 015377 318 NIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTA-AILLLEALIVLSVVVILLIPFET 386 (408)
Q Consensus 318 ~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~et 386 (408)
+.+..|.+|++.|+++.|+.+.++++++.++|.+.+.+.+..+... .+++.++.+..+.....+..||+
T Consensus 343 ~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (426)
T PRK12307 343 PKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTFIVAFWTATILLIIGLSIPDR 412 (426)
T ss_pred HHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHhhccccCChh
Confidence 6777899999999999999999999999999999988877665322 23333333444444433444554
No 18
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.95 E-value=8.5e-25 Score=209.89 Aligned_cols=318 Identities=23% Similarity=0.311 Sum_probs=206.3
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 79 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 79 (408)
|.|||+++..+.++..++.++.++++++..+++.|++.|++.|.. +....++.|++|+++|++.+++.+.+..+|..++
T Consensus 76 r~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 155 (406)
T PRK11551 76 RIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALA 155 (406)
T ss_pred HhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 579999999999999999999999999999999999999998875 3556688999999999999999999999999999
Q ss_pred HHHHhHhccccchHHHHHHhhHHHHHH-HHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCCCCcc
Q 015377 80 AALAWIVMPILTWRWLLALSAIPAFVL-LIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLD 158 (408)
Q Consensus 80 ~~l~~~~~~~~~Wr~~f~i~~i~~~~~-~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (408)
+.++..+.+..+||+.|++.++..++. .....++||+|++...+++.++.++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--------------------------- 208 (406)
T PRK11551 156 SVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQRAP--------------------------- 208 (406)
T ss_pred HHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhhhh---------------------------
Confidence 988877777789999999887655544 3455678998875321110000000
Q ss_pred cccCCCCCccccccccccccccccccchhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccccc
Q 015377 159 EEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSE 238 (408)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 238 (408)
. ....++++..+.....+...+.....++....|.|.+..+.+
T Consensus 209 ----------~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g---------- 251 (406)
T PRK11551 209 ----------V-----------------LRALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVGQG---------- 251 (406)
T ss_pred ----------h-----------------HHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----------
Confidence 0 000000111111122233333333344444445554432211
Q ss_pred CccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhh
Q 015377 239 NVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIAN 318 (408)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (408)
.+............+..+++.++.+++.||+|||+.+..+.....+.+..+....+............++..+..+..+
T Consensus 252 -~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 330 (406)
T PRK11551 252 -LSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLY 330 (406)
T ss_pred -CChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHH
Confidence 1111112233344567789999999999999999988765444444333333222222222222222223334456677
Q ss_pred hhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhh-HHHHHHHHHHHHHHHHHhcc
Q 015377 319 IFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTA-AILLLEALIVLSVVVILLIP 383 (408)
Q Consensus 319 ~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~-~~~~~~~~~~i~~~~~~~~~ 383 (408)
.+.+|.+|++.|+++.|+.+.++.+++.++|.+.+.+.+..+... .+.....+.+++.+..++..
T Consensus 331 ~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (406)
T PRK11551 331 ALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLLV 396 (406)
T ss_pred HHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 888999999999999999999999999999999998877544332 33344444445545544443
No 19
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.95 E-value=4e-25 Score=212.15 Aligned_cols=317 Identities=17% Similarity=0.235 Sum_probs=195.1
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcch-hhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 79 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 79 (408)
|.|||+.+.++.+++.++++++++++|++.+++.|+++|++.|... ....++.|++|+++||+.+++++.+..+|.+++
T Consensus 69 r~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~ 148 (412)
T TIGR02332 69 IIGARRWIAGIMVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALG 148 (412)
T ss_pred HhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4799999999999999999999999999999999999999998763 445678999999999999999999999999999
Q ss_pred HHHHhHhcc------ccchHHHHHHhhHHHHHH-HHHHHhccCcch---hHhhcCChhhHHHHHHHHHHHcCCCCCCCCc
Q 015377 80 AALAWIVMP------ILTWRWLLALSAIPAFVL-LIFIVFMPESPR---YLCTKGRITDAHNILDKIAQFNQTSLPSGNL 149 (408)
Q Consensus 80 ~~l~~~~~~------~~~Wr~~f~i~~i~~~~~-~~~~~~lpESp~---~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~ 149 (408)
+.++..+.+ ..+||+.|++.+++.++. .+.++++||+|+ |+. +++++..++..+.+..+
T Consensus 149 ~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~-----~~~~~~~~~~~~~~~~~------ 217 (412)
T TIGR02332 149 LILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLD-----EEDKKALKEMIDNDQLT------ 217 (412)
T ss_pred HHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCC-----HHHHHHHHHHHHhcccc------
Confidence 998776542 469999999998887665 445677899995 322 12222111111111000
Q ss_pred cCCCCCCcccccCCCCCccccccccccccccccccchhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 015377 150 TSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSK 229 (408)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 229 (408)
.++..++.++. +...+ ...+.+++++.+ .....++.....++++..|.|.+..+...
T Consensus 218 -------~~~~~~~~~~~---------~~~~~---~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~p~~l~~~~~ 274 (412)
T TIGR02332 218 -------LEQPEGAFAHA---------AMPQR---SMLREIFTPAIM----LYTLAYFCLTNTLSAINIWTPQILQSFNQ 274 (412)
T ss_pred -------ccccccccccc---------cccHH---HHHHHhcChHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 00000000000 00000 012223333322 23333444455566666666655432100
Q ss_pred CCcccccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHH-HHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Q 015377 230 CSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSM-TIMFIFVCIFLLPLVTLQSNILLTALLSGARM 308 (408)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (408)
...............++.++|.++.++++||++||+.. ........+.+.......+............+
T Consensus 275 ---------~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (412)
T TIGR02332 275 ---------GSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLASATDHNLIQLLGIIMASM 345 (412)
T ss_pred ---------CCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 00111112233455677888999999999999977643 32222222222111112221211111111111
Q ss_pred HhhhhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcc
Q 015377 309 FSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH 360 (408)
Q Consensus 309 ~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~ 360 (408)
......+..+....|.+|++.|+++.|+.++.+++|++++|.+.+.+.+..+
T Consensus 346 g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g 397 (412)
T TIGR02332 346 GSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATG 397 (412)
T ss_pred HhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCC
Confidence 1112223455666789999999999999999999999999999887777654
No 20
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.94 E-value=1.7e-24 Score=207.41 Aligned_cols=316 Identities=19% Similarity=0.286 Sum_probs=197.2
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcch-hhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 79 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 79 (408)
|.|||+.++++.++..++.+++++++++..+++.|++.|++.+... ....++.|+.|+++|++..++.+.+..+|..++
T Consensus 73 r~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~ 152 (405)
T TIGR00891 73 RYGRRLPMVTSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVA 152 (405)
T ss_pred HhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHH
Confidence 5799999999999999999999999999999999999999988764 556788999999999999999999999999999
Q ss_pred HHHHhHhccccc--hHHHHHHhhHHHHHHHHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCCCCc
Q 015377 80 AALAWIVMPILT--WRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDL 157 (408)
Q Consensus 80 ~~l~~~~~~~~~--Wr~~f~i~~i~~~~~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 157 (408)
+.++..+.+..+ ||+.|++.+++.++..+....+||+|++...+++.++..+..++..+ .+ ...
T Consensus 153 ~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----------~~~ 218 (405)
T TIGR00891 153 AQVYSLVVPVWGDGWRALFFISILPIIFALWLRKNIPEAEDWKEKHAGKALVRTMVDILYG---GE-----------HRI 218 (405)
T ss_pred HHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHhhhhhhhhhHHHHHhc---cc-----------hhh
Confidence 998877766554 99999998887777666777889998765333222211111111100 00 000
Q ss_pred ccccCCCCCccccccccccccccccccchhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccc
Q 015377 158 DEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLS 237 (408)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 237 (408)
+. ..+ +. . ...+. ..++.+.................++...+.|......
T Consensus 219 ~~---------~~~---~~----~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 268 (405)
T TIGR00891 219 AN---------IVM---TL----A---AAMVQ-SAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKAD---------- 268 (405)
T ss_pred hh---------hhh---hh----h---HHhhh-hhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHH----------
Confidence 00 000 00 0 00000 0011111111112222222222222222222211100
Q ss_pred cCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH-hhhhhHHHHHHHHHHHHHhhhhhhh
Q 015377 238 ENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLV-TLQSNILLTALLSGARMFSMGTFII 316 (408)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (408)
.+.+............++.+++.++.+++.||+|||+.+..+.....+...... ...+............++..+..+.
T Consensus 269 ~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (405)
T TIGR00891 269 LGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGI 348 (405)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhh
Confidence 001111222233445677889999999999999999988776655433222222 2222222111112222333344556
Q ss_pred hhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcc
Q 015377 317 ANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH 360 (408)
Q Consensus 317 ~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~ 360 (408)
...+.+|.+|++.|+++.|+.+.++.+++.++|.+.+.+.+..+
T Consensus 349 ~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g 392 (405)
T TIGR00891 349 LPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLD 392 (405)
T ss_pred HHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 67788999999999999999999999999999999998888765
No 21
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.94 E-value=3.2e-24 Score=207.44 Aligned_cols=338 Identities=16% Similarity=0.168 Sum_probs=206.9
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 79 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 79 (408)
|.|||+++.++.++..++.++.++++++..+++.|++.|++.|.. +....++.|++|+++||+.+++++.+..+|..++
T Consensus 84 r~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~ 163 (434)
T PRK11663 84 RSNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALI 163 (434)
T ss_pred hcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 579999999999999999999999999999999999999988865 4456688999999999999999999999999999
Q ss_pred HHHHhHhccccchHHHHHHhhHHHHHH-HHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCCCCcc
Q 015377 80 AALAWIVMPILTWRWLLALSAIPAFVL-LIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLD 158 (408)
Q Consensus 80 ~~l~~~~~~~~~Wr~~f~i~~i~~~~~-~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (408)
+.+...+.+..+||+.|++.+++.++. ++..+++||+|++.......++ .++
T Consensus 164 ~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~---------------------~~~------ 216 (434)
T PRK11663 164 PLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEW---------------------RHD------ 216 (434)
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccc---------------------ccc------
Confidence 998888878889999999988776554 4455678998864210000000 000
Q ss_pred cccCCCCCccccccccccccccccccch-hh--hccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015377 159 EEFSTSEETPLLSSARKRTTVRKSGFSS-FL--MLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSIL 235 (408)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 235 (408)
.+ +..++. +++ +.+.+. ++ .+.+++ .+......+.....++++..|.|.+.....
T Consensus 217 ~~-~~~~~~-------~~~---~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~------- 274 (434)
T PRK11663 217 AL-ELAQQQ-------EGA---GLSRKEILTKYVLLNPY----IWLLSFSYVLVYVVRAAINDWGNLYMSETL------- 274 (434)
T ss_pred cc-ccchhc-------ccc---CCChhhhHHHHHhcChH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-------
Confidence 00 000000 000 000000 00 011111 112222223333344444445443331110
Q ss_pred cccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhh--chH-HHHHHHHHHHH--HHHHHHHhhhhhHHHHHHHHHHHHHh
Q 015377 236 LSENVQDASVYINVFITSFAELPGLLTAALLVDRV--GRK-LSMTIMFIFVC--IFLLPLVTLQSNILLTALLSGARMFS 310 (408)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~--grR-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (408)
..+............+++++|.++.++++||+ ++| ........... ..........+........+...++.
T Consensus 275 ---g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 351 (434)
T PRK11663 275 ---GVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFASYVMQAACFFTIGFFV 351 (434)
T ss_pred ---CCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHH
Confidence 01111111222344567789999999999998 333 32222111111 11111111111111111122222222
Q ss_pred hhhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCCcc
Q 015377 311 MGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGKE 390 (408)
Q Consensus 311 ~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~~~ 390 (408)
.++......+.+|.+|++.|+++.|+.++.+++|+.++|.+.+.+.+..+....+.+.+++.+++.+..++..++.++++
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (434)
T PRK11663 352 FGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLPFLNAQAPRE 431 (434)
T ss_pred hhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhhhchhc
Confidence 23333445567899999999999999999999999999999998888777666777777887777777776666666654
No 22
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.94 E-value=3.1e-25 Score=201.37 Aligned_cols=331 Identities=21% Similarity=0.324 Sum_probs=224.0
Q ss_pred CcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHHH
Q 015377 2 EEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEA 80 (408)
Q Consensus 2 ~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~ 80 (408)
-+.|..+-+++++..+.+++.++++++..+.+.-+++|.-.|.+ +.+...++-|+|++|||+..++++.++++|..+.+
T Consensus 91 ~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~ 170 (448)
T COG2271 91 SNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAP 170 (448)
T ss_pred CCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHH
Confidence 46678888999999999999999999999999999999988876 56677889999999999999999999999999999
Q ss_pred HHH--hHhccccchHHHHHHhhHHHHHH-HHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCCCCc
Q 015377 81 ALA--WIVMPILTWRWLLALSAIPAFVL-LIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDL 157 (408)
Q Consensus 81 ~l~--~~~~~~~~Wr~~f~i~~i~~~~~-~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 157 (408)
++. ..+..+.+||..|++.++.+++. ++.++.+.|+|+=. |-. .+++..++ ..
T Consensus 171 ~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~---GLP--------~ie~~~~d-------------~~ 226 (448)
T COG2271 171 LVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSE---GLP--------PIEEYRGD-------------PL 226 (448)
T ss_pred HHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCcccc---CCC--------CHHHhhcC-------------ch
Confidence 888 66677789999999999988776 55677889998721 111 01110000 00
Q ss_pred ccccCCCCCccccccccccccccccccchhhhccchhhHHHHHHHHHHHHHHHHHH---HHHHHHHHhhhccCCCCCccc
Q 015377 158 DEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVY---YGIVLLASELSGSQSKCSSSI 234 (408)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~ 234 (408)
+.+ ++ +++. + +. +.++.+.+...++- .+|.+.+.+.+.| |++..|.|....+.
T Consensus 227 e~~-~~-~~~~-------~------~l-s~~~i~~~YVL~Nk-~iW~la~a~vfvYivR~gi~dW~p~YL~e~------- 282 (448)
T COG2271 227 EIY-EE-EKEN-------E------GL-TAWQIFVKYVLKNK-LIWLLALANVFVYVVRYGINDWGPLYLSEV------- 282 (448)
T ss_pred hhh-hh-hccC-------C------Cc-cHHHHHHHHHHcCh-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHh-------
Confidence 000 00 0000 0 00 01111111111111 2455655665555 77888877554321
Q ss_pred ccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhh--chHHHHHHHHHHHH-HHHHHHHhhhh--hHHHHHHHHHHHHH
Q 015377 235 LLSENVQDASVYINVFITSFAELPGLLTAALLVDRV--GRKLSMTIMFIFVC-IFLLPLVTLQS--NILLTALLSGARMF 309 (408)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~--grR~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~ 309 (408)
.+.+..+......+.-+++++|+++.|+++||+ |||......+.+.. +++.......+ ......+++...++
T Consensus 283 ---k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~ 359 (448)
T COG2271 283 ---KGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFL 359 (448)
T ss_pred ---cCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHH
Confidence 111112223334455688999999999999997 88877755433333 33333332222 23444455555666
Q ss_pred hhhhhhhhhhhcccccCCchhhHHHhHHHHhhhH-hHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcc
Q 015377 310 SMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRI-GGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIP 383 (408)
Q Consensus 310 ~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~-~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 383 (408)
..|+.-+......|..|.+.-+++.|+...++++ |+..+....+.+.|..++...|+++.+.++++.+..+...
T Consensus 360 IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~ 434 (448)
T COG2271 360 IYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPVW 434 (448)
T ss_pred HhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 6788778888999999999999999999999999 8888887777776776777778877777766665555443
No 23
>TIGR00895 2A0115 benzoate transport.
Probab=99.94 E-value=6.1e-24 Score=202.91 Aligned_cols=318 Identities=28% Similarity=0.378 Sum_probs=207.1
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 79 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 79 (408)
|.|||+.+..+.++..++.++.++++++..+++.|++.|++.|.. +....++.|+.|+++|++..++.+.+..+|..++
T Consensus 78 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 157 (398)
T TIGR00895 78 RIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVG 157 (398)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHH
Confidence 469999999999999999999999999999999999999998875 4566788999999999999999999999999999
Q ss_pred HHHHhHhccccchHHHHHHhhHHH-HHHHHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCCCCcc
Q 015377 80 AALAWIVMPILTWRWLLALSAIPA-FVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLD 158 (408)
Q Consensus 80 ~~l~~~~~~~~~Wr~~f~i~~i~~-~~~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (408)
+.+...+.+..+||+.+++.++.. +...+...++||+|++...+ +.+++.+..++....+..+.+ .+.+
T Consensus 158 ~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---------~~~~ 227 (398)
T TIGR00895 158 GFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSK-RPETVRRIVNAIAPQMQAEAQ---------SALP 227 (398)
T ss_pred HHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhc-CHHHHHHHHHHHHHhcccccc---------cccc
Confidence 999888888889999999886544 44455667889999887655 445555555544332211100 0000
Q ss_pred cccCCCCCccccccccccccccccccchhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccccc
Q 015377 159 EEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSE 238 (408)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 238 (408)
+ ++. +....+ ...+.+++++..+.....+...+.....++....+.|.+....+
T Consensus 228 ~------~~~-------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---------- 281 (398)
T TIGR00895 228 E------QKA-------TQGTKR---SVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMVELG---------- 281 (398)
T ss_pred c------ccc-------ccchhh---HHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC----------
Confidence 0 000 000000 01122333444444544555555555555555555554332111
Q ss_pred CccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhh
Q 015377 239 NVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIAN 318 (408)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (408)
.+............+..+++.++.++++||+|||.......+.............+............++..+..+..+
T Consensus 282 -~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 360 (398)
T TIGR00895 282 -FSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLY 360 (398)
T ss_pred -CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111122333444577889999999999999999544433332222222222122222222222223333344556778
Q ss_pred hhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHH
Q 015377 319 IFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGL 355 (408)
Q Consensus 319 ~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l 355 (408)
.+.+|.+|++.|+++.|+.+.++++|+.++|.+.+.+
T Consensus 361 ~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 361 ALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 8999999999999999999999999999999887643
No 24
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.93 E-value=5.8e-24 Score=202.59 Aligned_cols=332 Identities=16% Similarity=0.204 Sum_probs=200.4
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 79 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 79 (408)
|.|||+.+.++.++..++.++.++++|++.++++|++.|++.|.. +....++.|++|+++|++.+++.+....+|.+++
T Consensus 55 ~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 134 (399)
T TIGR00893 55 RFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIG 134 (399)
T ss_pred hcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHH
Confidence 579999999999999999999999999999999999999998765 4556788999999999999999999999999999
Q ss_pred HHHHhHhccccchHHHHHHhhHHHHHHHH-HHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCCCCcc
Q 015377 80 AALAWIVMPILTWRWLLALSAIPAFVLLI-FIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLD 158 (408)
Q Consensus 80 ~~l~~~~~~~~~Wr~~f~i~~i~~~~~~~-~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (408)
+.++..+.+..+||+.|++.++..++..+ ..+..||+|+.. ++.++.++.... +..+. +
T Consensus 135 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~---------------~ 194 (399)
T TIGR00893 135 GPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQKA---KWLTEEEKYIVV--GGLLA---------------E 194 (399)
T ss_pred HHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCCCCcc---ccCCHHHHhhcc--hhhcc---------------c
Confidence 99988887888999999998887666544 445567776421 111111100000 00000 0
Q ss_pred cccCCCCCccccccccccccccccccchhhhcc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccc
Q 015377 159 EEFSTSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLS 237 (408)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 237 (408)
. ++.+++ +......+..+ +++.+ ......+.....++....+.|....+..
T Consensus 195 ~--~~~~~~-------------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 246 (399)
T TIGR00893 195 Q--QGKGPS-------------TPKKYQIKELLKDRRVW----GLALGQFLVNIGLGFFLTWFPTYLVQER--------- 246 (399)
T ss_pred c--cccccc-------------CCCccchHHHhcCHHHH----HHHHHHHHHHhHHHHHHHHHHHHHHHHh---------
Confidence 0 000000 00001111222 22222 1222222222333333333332221100
Q ss_pred cCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHH--HHHHH-HH-HHHH--HHHHHHhh-hhhHHHHHHHHHHHHHh
Q 015377 238 ENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKL--SMTIM-FI-FVCI--FLLPLVTL-QSNILLTALLSGARMFS 310 (408)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~--~~~~~-~~-~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~ 310 (408)
+.+............+.++++.++.++++||++||+ ..... .. ...+ ........ .+.............+.
T Consensus 247 -~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (399)
T TIGR00893 247 -GLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFG 325 (399)
T ss_pred -cccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhc
Confidence 011111122334445677889999999999999996 11111 11 1111 11111111 11111111111222222
Q ss_pred hhhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcc-hhhHHHHHHHHHHHHHHHHHh
Q 015377 311 MGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH-QTAAILLLEALIVLSVVVILL 381 (408)
Q Consensus 311 ~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~-~~~~~~~~~~~~~i~~~~~~~ 381 (408)
.+..+..+.+.+|.+|++.|+++.|+.+.+.++|+.++|.+.+.+.+..+ ....+.+.+++.+++.+..++
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 397 (399)
T TIGR00893 326 LGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYLL 397 (399)
T ss_pred hhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHHH
Confidence 33467788899999999999999999999999999999999998887766 445566666666666555443
No 25
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.93 E-value=1.3e-23 Score=205.23 Aligned_cols=338 Identities=14% Similarity=0.137 Sum_probs=199.0
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhh-----hhhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAF-----SPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTF 74 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~ 74 (408)
|.|||+++.++.+++++..++.++ ++|+..+++.|++.|++.|.. +....++.|++|+++||+++++++.+..+
T Consensus 90 r~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~l 169 (467)
T PRK09556 90 GKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNL 169 (467)
T ss_pred ccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccch
Confidence 679999999888888777765554 689999999999999988765 45567889999999999999999999999
Q ss_pred HHHHHHHHHhHhccc---cchHHHHHHhhHHHHHHHH-HHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCcc
Q 015377 75 GSVSEAALAWIVMPI---LTWRWLLALSAIPAFVLLI-FIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLT 150 (408)
Q Consensus 75 G~~l~~~l~~~~~~~---~~Wr~~f~i~~i~~~~~~~-~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~ 150 (408)
|.++++++...+... .+||..|.+.+++.++..+ .+++.+|+|+.. +..+ +++.. + +
T Consensus 170 G~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~---~~~~-~~~~~------~--~------- 230 (467)
T PRK09556 170 GGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEEL---GWGK-AEEIF------G--E------- 230 (467)
T ss_pred hhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhc---CCCC-hhhcc------c--C-------
Confidence 999998877554432 2699999988877766543 445567777521 1101 00000 0 0
Q ss_pred CCCCCCcccccCCCCCccccccccccccccccccchhh-hccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 015377 151 SDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFL-MLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSK 229 (408)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 229 (408)
..+++.+..+++ +. ..++.+ .+ .+.++..+ ......+.....+++...|.|....+.
T Consensus 231 -----~~~~~~~~~~~~--------~~-~~~~~~--~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~p~yl~~~-- 288 (467)
T PRK09556 231 -----PISEEDKETEST--------DM-TKWQIF--VEYVLKNPVIW----LLCFANIFLYIVRIGIDNWSPVYAFQE-- 288 (467)
T ss_pred -----ccchhhhccccc--------cC-cHHHHH--HHHHHcChHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHc--
Confidence 000000000000 00 000000 00 11122222 233333334444555555665432111
Q ss_pred CCcccccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHH--HHHHhhhhhHHHHHHHHHHH
Q 015377 230 CSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFL--LPLVTLQSNILLTALLSGAR 307 (408)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 307 (408)
.+.+............++.++|.+++|+++||+|||+..........+.. .......+........+...
T Consensus 289 --------~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 360 (467)
T PRK09556 289 --------LGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFALG 360 (467)
T ss_pred --------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 00111111223334456788999999999999999887655433222211 11111122222212222222
Q ss_pred HHhhhhhhhhhhhcccccCCchhhHHHhHHHHhhhH-hHhhHHHHHHHHhh------------hcchhhHHHHHHHHHHH
Q 015377 308 MFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRI-GGMVCPLVAVGLVT------------SCHQTAAILLLEALIVL 374 (408)
Q Consensus 308 ~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~-~~~~~p~~~~~l~~------------~~~~~~~~~~~~~~~~i 374 (408)
++..+.....+.+..|.+|.+.|+++.|+.+.++.+ |++++|.+.+.+.+ ..++...+.++.++.++
T Consensus 361 ~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~ 440 (467)
T PRK09556 361 FLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIG 440 (467)
T ss_pred HHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHH
Confidence 222233333345667999999999999999999997 77899999998888 34455666677777777
Q ss_pred HHHHHHhcc-cccC
Q 015377 375 SVVVILLIP-FETK 387 (408)
Q Consensus 375 ~~~~~~~~~-~et~ 387 (408)
+.+..+++. .|+|
T Consensus 441 ~~~~~~~~~~~~~~ 454 (467)
T PRK09556 441 CICLMAIVAVMEER 454 (467)
T ss_pred HHHHHHHHHHHHHH
Confidence 766655543 4544
No 26
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.92 E-value=3.3e-23 Score=199.53 Aligned_cols=333 Identities=16% Similarity=0.087 Sum_probs=211.4
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhh-----hhhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAF-----SPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTF 74 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~ 74 (408)
|.|||+.+..+.++..++.+..+. .++++.+++.|++.|++.|.. +....++.|+.|+++|++..++.+....+
T Consensus 78 r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (417)
T PRK10489 78 RYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRL 157 (417)
T ss_pred hcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhH
Confidence 579999998888777766554432 567899999999999987654 34456778999999999999999999999
Q ss_pred HHHHHHHHHhHhccccchHHHHHHhhHHHHHHHHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCC
Q 015377 75 GSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGT 154 (408)
Q Consensus 75 G~~l~~~l~~~~~~~~~Wr~~f~i~~i~~~~~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~ 154 (408)
|..+++.++..+.+..+||+.+++.++..++..+..+.+||+|+.. +++ +
T Consensus 158 g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~-~--------------------------- 207 (417)
T PRK10489 158 GSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLRLPALPPPP--QPR-E--------------------------- 207 (417)
T ss_pred HHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhCCCCCCCC--ccc-c---------------------------
Confidence 9999999988877778999999988877766666666777764310 000 0
Q ss_pred CCcccccCCCCCccccccccccccccccccchhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccc
Q 015377 155 NDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSI 234 (408)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 234 (408)
+ +.+.. + ..++..++++..+...+..... . ...+...+.|....+.
T Consensus 208 ----~-----~~~~~-----------~---~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~p~~~~~~------- 253 (417)
T PRK10489 208 ----H-----PLRSL-----------L---AGFRFLLASPVVGGIALLGGLL---T-MASAVRVLYPALADEV------- 253 (417)
T ss_pred ----c-----chHHH-----------H---HHHHHHHcChHHHHHHHHHHHH---H-HHHhHHHhhHHHHHhc-------
Confidence 0 00000 0 0111112222222121111111 1 1122222333222110
Q ss_pred ccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhh
Q 015377 235 LLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTF 314 (408)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (408)
.+.+............++.++|.++.+++.||.++|+.+..+..+..+..+.+....+........+...+......
T Consensus 254 ---~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 330 (417)
T PRK10489 254 ---WQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISS 330 (417)
T ss_pred ---cCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHH
Confidence 00111111122234456778889999999999777766666555444443333322222221111211112211222
Q ss_pred hhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCCcccccc
Q 015377 315 IIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGKELVNT 394 (408)
Q Consensus 315 ~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~~~~~~~ 394 (408)
+....+..|..|.+.|+++.|+.+....+|+.++|.+.+.+.+..+....+.+++++.++..++.....||+|+++.+|+
T Consensus 331 ~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (417)
T PRK10489 331 LLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGELRRFRQTPP 410 (417)
T ss_pred HHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhcccccccccccc
Confidence 44567888999999999999999999999999999999988887776667777787777777777777789999999999
Q ss_pred cccccc
Q 015377 395 IDGVSN 400 (408)
Q Consensus 395 ~~~~~~ 400 (408)
.||.+.
T Consensus 411 ~~~~~~ 416 (417)
T PRK10489 411 EVDASD 416 (417)
T ss_pred cCCCCC
Confidence 998765
No 27
>PRK03545 putative arabinose transporter; Provisional
Probab=99.92 E-value=1.6e-22 Score=192.95 Aligned_cols=307 Identities=16% Similarity=0.127 Sum_probs=194.4
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 79 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 79 (408)
|.|||+.+..+.++..++++++++++|++.++++|+++|++.+.. +....++.|++|+++|++.+++.+.+..+|..++
T Consensus 70 r~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig 149 (390)
T PRK03545 70 NVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLG 149 (390)
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHH
Confidence 689999999999999999999999999999999999999988765 3456788999999999999999999999999999
Q ss_pred HHHHhHhccccchHHHHHHhhHHHHHHH-HHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCCCCcc
Q 015377 80 AALAWIVMPILTWRWLLALSAIPAFVLL-IFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLD 158 (408)
Q Consensus 80 ~~l~~~~~~~~~Wr~~f~i~~i~~~~~~-~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (408)
++++..+.+..+||+.|++.++..++.. +.+..+||.|+. + ++..
T Consensus 150 ~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~-----~-~~~~---------------------------- 195 (390)
T PRK03545 150 LPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPSE-----H-SGSL---------------------------- 195 (390)
T ss_pred hhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCCC-----C-cchH----------------------------
Confidence 9998888788899999999888766553 334456665420 0 0000
Q ss_pred cccCCCCCccccccccccccccccccchhhhcc-chhhHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhccCCCCCccccc
Q 015377 159 EEFSTSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRFFKTTILLWVLYFGNSFVYYGIVLL-ASELSGSQSKCSSSILL 236 (408)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~ 236 (408)
+.....+ +++.+..... .+.....+++...+ .+.+....
T Consensus 196 --------------------------~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~--------- 236 (390)
T PRK03545 196 --------------------------KSLPLLFRRPALVSLYLL----TVVVVTAHFTAYSYIEPFVQQVA--------- 236 (390)
T ss_pred --------------------------HHHHHHHhCcHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhc---------
Confidence 0000111 1222221111 11111112221112 22221110
Q ss_pred ccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhh
Q 015377 237 SENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFII 316 (408)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (408)
+.+............+.++++.++.++++||.+||.......+.............+............+...+....
T Consensus 237 --g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~ 314 (390)
T PRK03545 237 --GLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLIAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLA 314 (390)
T ss_pred --CCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHH
Confidence 011111122233445678899999999999999887554333322222221122222222111222212222222233
Q ss_pred hhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcc
Q 015377 317 ANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIP 383 (408)
Q Consensus 317 ~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 383 (408)
......|..| +.|+++.|+.+....+|..++|.+.+.+.+..+....+...+.+.++++++.++..
T Consensus 315 ~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 315 MQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 3455567777 57899999999999999999999999888877766677777777777777766655
No 28
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.92 E-value=9.9e-23 Score=200.75 Aligned_cols=358 Identities=18% Similarity=0.266 Sum_probs=203.6
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 79 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 79 (408)
|.|||+.++++.++..++.++.++++|+..++++|++.|++.+.. .....++.|..|+++|++..+....+..+|..++
T Consensus 81 r~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 160 (496)
T PRK03893 81 RYGRRLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVA 160 (496)
T ss_pred HhCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 469999999999999999999999999999999999999998865 4556778999999999999999999999999999
Q ss_pred HHHHhHhccccchHHHHHHhhHHHHHHHHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCCCCccc
Q 015377 80 AALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDE 159 (408)
Q Consensus 80 ~~l~~~~~~~~~Wr~~f~i~~i~~~~~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (408)
+.+...+.+..+||+.|++..++.++.++....+||++++...+++.++.++..+...+.++. ....
T Consensus 161 ~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~ 227 (496)
T PRK03893 161 AQVYSLVVPVWGWRALFFIGILPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHR-------------IINI 227 (496)
T ss_pred HHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhCCCchhhhhhccccccchhHHHHHhcchhH-------------HHHH
Confidence 999888888899999999877766665556677899877643322211111111100000000 0000
Q ss_pred ccCCCCCccccccccccccccccccc-------------hhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015377 160 EFSTSEETPLLSSARKRTTVRKSGFS-------------SFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGS 226 (408)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 226 (408)
...... ....... ... ..+..+. .+.....++.+..........+......++...+.|.+...
T Consensus 228 ~~~~~~-~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~ 304 (496)
T PRK03893 228 LLTLAA-AAALWFC-FAG-NLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKT 304 (496)
T ss_pred HHHHHH-HHHHHHH-HHh-hhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHh
Confidence 000000 0000000 000 0000000 00000000011111111111111111111122233332210
Q ss_pred CCCCCcccccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh-hhhH-HHHHHHH
Q 015377 227 QSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL-QSNI-LLTALLS 304 (408)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~ 304 (408)
. .+..............++.++|.++.++++||+|||+.+..+..+..+..+..... .... ......+
T Consensus 305 ~----------~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (496)
T PRK03893 305 D----------LGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLF 374 (496)
T ss_pred h----------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHH
Confidence 0 01111222333444567788899999999999999998877655544433322221 1111 1111122
Q ss_pred HHHHHhhhhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHH-HHHHHHHHhcc
Q 015377 305 GARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALI-VLSVVVILLIP 383 (408)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~-~i~~~~~~~~~ 383 (408)
...+...+..+....+.+|.+|.+.|+++.|+.++.+.+|+.++|.+.+.+.+..+....+...+.++ +.+.+...+..
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 454 (496)
T PRK03893 375 FQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTFVVILLIGLDM 454 (496)
T ss_pred HHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHHHhcC
Confidence 21122223344556678899999999999999999999999999999988877666544554444333 33333333433
Q ss_pred c
Q 015377 384 F 384 (408)
Q Consensus 384 ~ 384 (408)
|
T Consensus 455 ~ 455 (496)
T PRK03893 455 P 455 (496)
T ss_pred c
Confidence 3
No 29
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.92 E-value=5.1e-22 Score=189.57 Aligned_cols=315 Identities=16% Similarity=0.094 Sum_probs=202.1
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcch-hhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 79 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 79 (408)
|.|||+++..+.+++.++.+.+++++|+..++++|+++|++.|... ....++.|+.| ++|+++++.+..+...|..++
T Consensus 70 r~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g 148 (393)
T PRK09705 70 HVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLG 148 (393)
T ss_pred HhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHH
Confidence 4799999999999999999999999999999999999999998754 44556778887 889999999999999999999
Q ss_pred HHHHhHhcccc-chHHHHHHhhHHHHHHHHHHHhccC-cchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCCCCc
Q 015377 80 AALAWIVMPIL-TWRWLLALSAIPAFVLLIFIVFMPE-SPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDL 157 (408)
Q Consensus 80 ~~l~~~~~~~~-~Wr~~f~i~~i~~~~~~~~~~~lpE-Sp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 157 (408)
+.+...+.++. +||+.+.+.+++.++..+.++...+ .|+ ++
T Consensus 149 ~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~--------- 191 (393)
T PRK09705 149 AAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSAREVA----------------------------SS--------- 191 (393)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhcCCCc----------------------------cc---------
Confidence 88887766654 8999887766665443333322111 000 00
Q ss_pred ccccCCCCCccccccccccccccccccchhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccc
Q 015377 158 DEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLS 237 (408)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 237 (408)
++ ++. . ....+.+++.+ .....++.....+++...|.|....+.+
T Consensus 192 ~~-----~~~--------~---------~~~~l~~~~~~----~l~~~~~~~~~~~~~~~~~lp~~l~~~g--------- 236 (393)
T PRK09705 192 HK-----TTT--------T---------PVRVVFTPRAW----TLGVYFGLINGGYASLIAWLPAFYIEIG--------- 236 (393)
T ss_pred cC-----CCc--------C---------CcccccCHhHH----HHHHHHHHHHHHHHHHHHHHHHHHHHcC---------
Confidence 00 000 0 00011122222 1222222334455555555554432211
Q ss_pred cCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh-hhhhHHHHHHHHHHHHHhhhhhhh
Q 015377 238 ENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT-LQSNILLTALLSGARMFSMGTFII 316 (408)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 316 (408)
.+.........+..+.+++|.++.+++.||.+||+....+..+..+....+.. ..+..... . ....+...+.++.
T Consensus 237 --~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~-~l~g~g~g~~~~~ 312 (393)
T PRK09705 237 --ASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVLW-A-MVCGLGLGGAFPL 312 (393)
T ss_pred --CChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHHH-H-HHHHHhccchHHH
Confidence 11111122334556778899999999999999998887765554443332221 12111111 1 1111222233344
Q ss_pred hhhhccccc-CCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcch-hhHHHHHHHHHHHHHHHHHhcccccCCcccc
Q 015377 317 ANIFAPEIY-PTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQ-TAAILLLEALIVLSVVVILLIPFETKGKELV 392 (408)
Q Consensus 317 ~~~~~~el~-p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~et~~~~~~ 392 (408)
......+.+ |++.|+++.|+.+.++.+++.++|.+.+.+.+..+. ...+.+..+++++..++.+.++|||++|...
T Consensus 313 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK09705 313 CLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARFPQLWV 390 (393)
T ss_pred HHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccccchhc
Confidence 444555666 468899999999999999999999999988887653 3455666677777778878899999987544
No 30
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.92 E-value=2.5e-22 Score=191.42 Aligned_cols=295 Identities=20% Similarity=0.258 Sum_probs=184.7
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHH--------HHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYI--------SLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTF 71 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~ 71 (408)
|.|||+++..+.++..++.++.++++++. .++++|+++|++.|.. +....++.|+.|+++|++..+..+.+
T Consensus 61 r~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 140 (394)
T TIGR00883 61 RIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVG 140 (394)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHH
Confidence 57999999999999999999999999876 4899999999998875 45567889999999999999999999
Q ss_pred HHHHHHHHHHHHhHhc--------cccchHHHHHHhhHHHHHHHHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCC
Q 015377 72 WTFGSVSEAALAWIVM--------PILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTS 143 (408)
Q Consensus 72 ~~~G~~l~~~l~~~~~--------~~~~Wr~~f~i~~i~~~~~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~ 143 (408)
..+|.++++.+...+. +..+||+.|++.++..++..+....+||+|++...+++ .+
T Consensus 141 ~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~ 204 (394)
T TIGR00883 141 APVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQEK----------------HK 204 (394)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHhc----------------cc
Confidence 9999999887765432 35689999998887766666666677887754211000 00
Q ss_pred CCCCCccCCCCCCcccccCCCCCccccccccccccccccccchhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015377 144 LPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASEL 223 (408)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 223 (408)
+ ++. ..+..++++ ++.........+.....++....+.|.+
T Consensus 205 ---------------~-----~~~------------------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (394)
T TIGR00883 205 ---------------K-----KRG------------------PIRETLTKH-RKPFLLGLGLVIATTTTFYLITTYLPTY 245 (394)
T ss_pred ---------------c-----ccC------------------CHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 000 000111111 1112222223333333344333333333
Q ss_pred hccCCCCCcccccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHH-HH-HHhh--hhhHHH
Q 015377 224 SGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFL-LP-LVTL--QSNILL 299 (408)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~-~~-~~~~--~~~~~~ 299 (408)
.... .+.+............+..+++.++.++++||+|||+.+..+.....+.. .. .... .+....
T Consensus 246 ~~~~----------~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (394)
T TIGR00883 246 LTQT----------LGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLF 315 (394)
T ss_pred HHHh----------cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHH
Confidence 2110 00111122223334456678888999999999999997765433332222 11 1111 111222
Q ss_pred HHHHHHHHHHhhhhhhhhhhhcccccCCchhhHHHhHHHHhhh-HhHhhHHHHHHHHhhhcc
Q 015377 300 TALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGR-IGGMVCPLVAVGLVTSCH 360 (408)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~-~~~~~~p~~~~~l~~~~~ 360 (408)
........+......+....+.+|.+|++.|+++.|+.+.++. +|+.++|.+.+.+.+..+
T Consensus 316 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g 377 (394)
T TIGR00883 316 FFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTG 377 (394)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcC
Confidence 1222222222223446677888999999999999999776654 678899999988877665
No 31
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.91 E-value=7.8e-22 Score=191.82 Aligned_cols=338 Identities=17% Similarity=0.220 Sum_probs=191.8
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhh----hHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSP----NYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFG 75 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G 75 (408)
|.|||+.++.+.++++++.++.++++ ++..+++.|++.|++.|.. +.....+.|++|+++||+.+++++.+..+|
T Consensus 89 r~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 168 (452)
T PRK11273 89 RSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVG 168 (452)
T ss_pred ccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhh
Confidence 67999999999999999888887753 7888999999999988765 334556789999999999999999999888
Q ss_pred HHH-HHHHHhHhccccchHHHHHHhhHHHHHH-HHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCC
Q 015377 76 SVS-EAALAWIVMPILTWRWLLALSAIPAFVL-LIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDG 153 (408)
Q Consensus 76 ~~l-~~~l~~~~~~~~~Wr~~f~i~~i~~~~~-~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~ 153 (408)
..+ ++++........+||+.|++.+++.++. .+..+++||+|+... ..++++. + + +. + +
T Consensus 169 ~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~--~---~---~~-~-----~-- 229 (452)
T PRK11273 169 GGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTPQSCG---LPPIEEY--K---N---DY-P-----D-- 229 (452)
T ss_pred hhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcC---CCChhhh--h---h---cc-c-----c--
Confidence 644 4444333333459999999988776654 556677899887421 1111000 0 0 00 0 0
Q ss_pred CCCcccccCCCCCccccccccccccccccccchhhhcc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCc
Q 015377 154 TNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSS 232 (408)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 232 (408)
+.++ ++ +++ . ..++.+ .+..+ ++..+ ......+.....+++...+.|....+..
T Consensus 230 --~~~~--~~-~~~--------~--~~~~~~--~~~~~~~~~~~----~~~l~~~~~~~~~~~~~~~~P~~l~~~~---- 284 (452)
T PRK11273 230 --DYNE--KH-EQE--------L--TAKQIF--MQYVLPNKLLW----YIAIANVFVYLLRYGILDWSPTYLKEVK---- 284 (452)
T ss_pred --cccc--cc-CCC--------c--cHHHHH--HHHHHcChHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhc----
Confidence 0000 00 000 0 000000 00111 11121 1222222223334555555554432110
Q ss_pred ccccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhh--chHHHHHH-HHHHHHHHHHHHHh--hhhhHHHHHHHHHHH
Q 015377 233 SILLSENVQDASVYINVFITSFAELPGLLTAALLVDRV--GRKLSMTI-MFIFVCIFLLPLVT--LQSNILLTALLSGAR 307 (408)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~--grR~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 307 (408)
+...........+..+.++++.+++++++||+ +||..... ......+....... ..+........+...
T Consensus 285 ------g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g 358 (452)
T PRK11273 285 ------HFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIG 358 (452)
T ss_pred ------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHH
Confidence 01111112223344567788999999999999 55543322 11111111111111 111111111122222
Q ss_pred HHhhhhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhh-HHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhc-ccc
Q 015377 308 MFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMV-CPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLI-PFE 385 (408)
Q Consensus 308 ~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~-~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~e 385 (408)
....+.......+..|.+|++.|+++.|+.+..+.+|+.+ +|.+.+.+.+..+....|.+++++++++.+....+ .+|
T Consensus 359 ~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~ 438 (452)
T PRK11273 359 FLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGE 438 (452)
T ss_pred HHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhccc
Confidence 2222222333456779999999999999999999988765 68888888887776667777777777776665543 344
Q ss_pred cCC
Q 015377 386 TKG 388 (408)
Q Consensus 386 t~~ 388 (408)
+|+
T Consensus 439 ~~~ 441 (452)
T PRK11273 439 KRH 441 (452)
T ss_pred cch
Confidence 443
No 32
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.91 E-value=2e-21 Score=186.04 Aligned_cols=313 Identities=14% Similarity=0.045 Sum_probs=192.6
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhh--------hhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFS--------PNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTF 71 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~--------~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~ 71 (408)
|.|||++++.+.++..++++..+++ .++..+++.|+++|++.+.. +....++.|+.|+++|++.+++.+.+
T Consensus 77 r~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 156 (399)
T PRK05122 77 TLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIA 156 (399)
T ss_pred ccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhh
Confidence 5799999999999888877665543 25778999999999998875 45566788999999999999999999
Q ss_pred HHHHHHHHHHHHhHhccccchHHHHHHhhHHHHHHHHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccC
Q 015377 72 WTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTS 151 (408)
Q Consensus 72 ~~~G~~l~~~l~~~~~~~~~Wr~~f~i~~i~~~~~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~ 151 (408)
..+|.++++.++..+.+..+||+.+++..+..++..+.....||++. .+
T Consensus 157 ~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-------------------------- 205 (399)
T PRK05122 157 TYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLLARPRPAVPP-----VK-------------------------- 205 (399)
T ss_pred hhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCCCC-----CC--------------------------
Confidence 99999999999888888889999988776655443333222232211 00
Q ss_pred CCCCCcccccCCCCCccccccccccccccccccchhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 015377 152 DGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCS 231 (408)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 231 (408)
+ ++. +.+..+ ++.++... .. ....+.+.....+.+....+.+
T Consensus 206 -------~-----~~~------------------~~~~~~-~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~--- 247 (399)
T PRK05122 206 -------G-----ERL------------------PFRRVL-GRVWPYGM-GL---ALASIGFGTIATFITLYYAARG--- 247 (399)
T ss_pred -------c-----cch------------------hHHHHH-HHHHHHHH-HH---HHHHHHHHHHHHHHHHHHHHcc---
Confidence 0 000 000000 01111111 01 1111222222222221111110
Q ss_pred cccccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhh
Q 015377 232 SSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSM 311 (408)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (408)
..... .......+..+++.++.+++.||.|||+.+..+.....+....+....+............++..
T Consensus 248 --------~~~~~--~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~ 317 (399)
T PRK05122 248 --------WDGAA--LALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFS 317 (399)
T ss_pred --------cccch--HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHH
Confidence 00111 11223345667888999999999999998877655555444333333332222221222222222
Q ss_pred hhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCCccc
Q 015377 312 GTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGKEL 391 (408)
Q Consensus 312 ~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~~~~ 391 (408)
..++.......|.+|.+.|+++.|+.+....+|+.++|.+.+.+.+..+....+.+.+++++++.+...++. +.++++.
T Consensus 318 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 396 (399)
T PRK05122 318 LVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLY-RRAPRAV 396 (399)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhc-ccccccC
Confidence 233444455678999999999999999999999888888888887766666677777777777776666654 5555555
Q ss_pred cc
Q 015377 392 VN 393 (408)
Q Consensus 392 ~~ 393 (408)
+|
T Consensus 397 ~~ 398 (399)
T PRK05122 397 PE 398 (399)
T ss_pred CC
Confidence 54
No 33
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.91 E-value=7.7e-22 Score=186.91 Aligned_cols=306 Identities=17% Similarity=0.225 Sum_probs=189.5
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcch-hhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 79 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 79 (408)
|.|||+++..+.++..++.+++++++|++.++++|++.|++.|... ....+..|+.| ++||+..+....+..+|..++
T Consensus 64 ~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~ 142 (377)
T TIGR00890 64 KFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFIL 142 (377)
T ss_pred HcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHH
Confidence 5799999999999999999999999999999999999999988653 44456678886 679999999999999998876
Q ss_pred HHHHhHhccccchHHHHHHhhHHHHHHHHH-HHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCCCCcc
Q 015377 80 AALAWIVMPILTWRWLLALSAIPAFVLLIF-IVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLD 158 (408)
Q Consensus 80 ~~l~~~~~~~~~Wr~~f~i~~i~~~~~~~~-~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (408)
+++...+.+..+||+.|++.++..++..+. .++++|+|+-. . +++ .+.+
T Consensus 143 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~---~----------------~~~-----------~~~~ 192 (377)
T TIGR00890 143 SPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQL---I----------------KTN-----------IEVS 192 (377)
T ss_pred HHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheecCchhc---c----------------ccC-----------cccc
Confidence 666555566779999999988877665444 44455543200 0 000 0000
Q ss_pred cccCCCCCccccccccccccccccccchhhhcc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccc
Q 015377 159 EEFSTSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLS 237 (408)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 237 (408)
++ + ...++.+ +++.+. .....+...+.......+.+....+.
T Consensus 193 ------~~---------~--------~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 235 (377)
T TIGR00890 193 ------VK---------D--------YTVWEMLRTPQFWV----LYLSFFLNAVSGLLLIGLYKPYGQSL---------- 235 (377)
T ss_pred ------hh---------h--------hhHHHHHcCccHHH----HHHHHHHHhHHHHHHHHHHHHHHHHc----------
Confidence 00 0 0001111 122221 11111111111111111111111110
Q ss_pred cCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhh--hHHHHHHHHHHHHHhhhhhh
Q 015377 238 ENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQS--NILLTALLSGARMFSMGTFI 315 (408)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 315 (408)
............+..+..+++.++.+++.||+|||+.+..+.....+....+....+ ............+......+
T Consensus 236 -~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 314 (377)
T TIGR00890 236 -GLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTIS 314 (377)
T ss_pred -CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchh
Confidence 011111222334455677889999999999999999887766655554443333221 11111111112222222334
Q ss_pred hhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHH
Q 015377 316 IANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLS 375 (408)
Q Consensus 316 ~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~ 375 (408)
....+.+|.+|++.|+++.|+.+....+|+.++|.+.+.+.+..+....+.+.+++++++
T Consensus 315 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 315 LFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred ccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 456678899999999999999999999999999999988877766656666666665554
No 34
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.91 E-value=3.4e-21 Score=177.31 Aligned_cols=309 Identities=21% Similarity=0.249 Sum_probs=200.6
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcch-hhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 79 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 79 (408)
|..||+.++....++.++++++++++||+.++++|++.|++-|... +.....++..|+++|+++++....+.+++.+++
T Consensus 74 r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~G 153 (394)
T COG2814 74 RLERRRLLLGLLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLG 153 (394)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHh
Confidence 4689999999999999999999999999999999999999999874 556677899999999999999999999999999
Q ss_pred HHHHhHhccccchHHHHHHhhHHHHHH-HHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCCCCcc
Q 015377 80 AALAWIVMPILTWRWLLALSAIPAFVL-LIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLD 158 (408)
Q Consensus 80 ~~l~~~~~~~~~Wr~~f~i~~i~~~~~-~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (408)
.+++.++.+.+|||+.|++.+..+++. ...+..+| |+-. .+.
T Consensus 154 vPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP--~~~~---------------------~~~-------------- 196 (394)
T COG2814 154 VPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP--PSEI---------------------SGS-------------- 196 (394)
T ss_pred ccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC--CccC---------------------CCC--------------
Confidence 999999999999999999998887775 45667788 3200 000
Q ss_pred cccCCCCCccccccccccccccccccchhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccccc
Q 015377 159 EEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSE 238 (408)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 238 (408)
.+.+. .+..+.+.+|+.+.......+.+.++. ..| .+..|.+.+..
T Consensus 197 ------~~~~~--------------~~~~~~l~~p~v~~~l~~t~l~~~g~F-~~f--tYi~P~L~~v~----------- 242 (394)
T COG2814 197 ------LPGPL--------------RTLLRLLRRPGVLLGLLATFLFMTGHF-ALY--TYIRPFLESVA----------- 242 (394)
T ss_pred ------CCcch--------------hHHHHHhcCchHHHHHHHHHHHHcchh-hhH--HhHHHHHHHcc-----------
Confidence 00000 001222333444443333222222222 222 22234333211
Q ss_pred CccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh-hhhhHHHHHHHHHHHHHhhhhhhhh
Q 015377 239 NVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT-LQSNILLTALLSGARMFSMGTFIIA 317 (408)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (408)
..+....-......++++++|.+++|++.|| +.|+.+........+.+..+.. ..+........+...+.........
T Consensus 243 g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~ 321 (394)
T COG2814 243 GFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGL 321 (394)
T ss_pred CCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHH
Confidence 1122334455566778899999999999999 7777766654444444433333 2333333222322222211122223
Q ss_pred hhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhc
Q 015377 318 NIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLI 382 (408)
Q Consensus 318 ~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 382 (408)
....++ .-++.+..+.++.....++|..++..+.+.+++..+......+-+...+++..+....
T Consensus 322 ~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~ 385 (394)
T COG2814 322 QTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLS 385 (394)
T ss_pred HHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHH
Confidence 344455 4457789999999999999988888888888887554444444445555555444443
No 35
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.91 E-value=5e-22 Score=194.09 Aligned_cols=328 Identities=15% Similarity=0.154 Sum_probs=195.6
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhh--hhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFS--PNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSV 77 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~ 77 (408)
|.|||+++..+.++++++.+++.++ .++..+++.|+++|++.|.. +....++.|+.|+++||+.+++.+.+..+|.+
T Consensus 102 r~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 181 (465)
T TIGR00894 102 KYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTF 181 (465)
T ss_pred HhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 4799999999999999988877544 56889999999999999886 45667899999999999999999999999999
Q ss_pred HHHHHHhHhccc-cchHHHHHHhhHHHHHHHHH-HHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCCC
Q 015377 78 SEAALAWIVMPI-LTWRWLLALSAIPAFVLLIF-IVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTN 155 (408)
Q Consensus 78 l~~~l~~~~~~~-~~Wr~~f~i~~i~~~~~~~~-~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 155 (408)
+++++...+.+. .+||+.|++.++++++..+. +.+.||+|+.. .+.++.++ +.+.+...
T Consensus 182 i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~---~~~~~~~~--~~i~~~~~-------------- 242 (465)
T TIGR00894 182 IFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIH---PCISKFEK--KYINSSLQ-------------- 242 (465)
T ss_pred HHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccC---CCCCHHHH--HHHHhhcc--------------
Confidence 999998887777 49999999999888776554 44567888621 11111111 11110000
Q ss_pred CcccccCCCCCccccccccccccccccccchhhhcc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccc
Q 015377 156 DLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSI 234 (408)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 234 (408)
++.++ . ..+ ..++..+ +++. .......+.....++....|.|.......
T Consensus 243 ---~~~~~--~------------~~~---~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~lp~~l~~~~------ 292 (465)
T TIGR00894 243 ---GQKGS--T------------RQS---LPIKAIPKSLPV----WAIWFAIFGHFWLYTILPTYLPTFISWVL------ 292 (465)
T ss_pred ---cccCC--C------------CCC---CCHHHHhcCHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHh------
Confidence 00000 0 000 0112222 2222 22333444444555555555554432110
Q ss_pred ccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHH--------HHHHHHH--HHHHHHHHh-hhhhHHHHHHH
Q 015377 235 LLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSM--------TIMFIFV--CIFLLPLVT-LQSNILLTALL 303 (408)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~--------~~~~~~~--~~~~~~~~~-~~~~~~~~~~~ 303 (408)
+...........+..+..+++.+++|+++||+++|+.. ..+.... .+....... ..+.......+
T Consensus 293 ----g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (465)
T TIGR00894 293 ----RVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIIL 368 (465)
T ss_pred ----CcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHH
Confidence 01111122233345677788999999999998654211 1111111 111111111 11122222222
Q ss_pred HHHHHHhhhhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhc--c-hhhHHHHHHHHHHHHHHHHH
Q 015377 304 SGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSC--H-QTAAILLLEALIVLSVVVIL 380 (408)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~--~-~~~~~~~~~~~~~i~~~~~~ 380 (408)
.....+..+.....+....|..|. .++++.|+.+..+.++++++|.+.+.+.+.. + ....+.+.++..+++.++..
T Consensus 369 ~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~ 447 (465)
T TIGR00894 369 TLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYL 447 (465)
T ss_pred HHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHee
Confidence 222222222334445556677776 8999999999999999999999988766532 2 33456666666677665544
Q ss_pred hc
Q 015377 381 LI 382 (408)
Q Consensus 381 ~~ 382 (408)
++
T Consensus 448 ~~ 449 (465)
T TIGR00894 448 IF 449 (465)
T ss_pred ee
Confidence 43
No 36
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.91 E-value=8.5e-22 Score=192.44 Aligned_cols=319 Identities=13% Similarity=0.088 Sum_probs=182.0
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcchhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEA 80 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~ 80 (408)
|.|||+++..+.++++++.+++++++++..++++|++.|++.+.......+++|++|+++||+.+++.+....+|..+++
T Consensus 97 r~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~ 176 (476)
T PLN00028 97 LYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFSLATFVSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQ 176 (476)
T ss_pred HhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhHHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHH
Confidence 57999999999999999999999999999999999999998876444445788999999999999998776666666655
Q ss_pred HHHhHh----cc-----ccchHHHHHHhhHHHHHHHHHHHhcc-CcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCcc
Q 015377 81 ALAWIV----MP-----ILTWRWLLALSAIPAFVLLIFIVFMP-ESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLT 150 (408)
Q Consensus 81 ~l~~~~----~~-----~~~Wr~~f~i~~i~~~~~~~~~~~lp-ESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~ 150 (408)
.+...+ .+ ..+||+.|++.+++.++..+..++++ |.|+ ++.++.+ + +
T Consensus 177 ~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~-----~~~~~~~-------~--~--------- 233 (476)
T PLN00028 177 LLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPD-----GNYRELK-------K--S--------- 233 (476)
T ss_pred HHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCC-----CchhhHH-------h--c---------
Confidence 444322 11 25899999999888776655444444 3332 1110000 0 0
Q ss_pred CCCCCCcccccCCCCCccccccccccccccccccchhhh-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 015377 151 SDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLM-LFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSK 229 (408)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 229 (408)
.+.++.. ....++. +.+++ ++.++..++......++...+.|......
T Consensus 234 -----------~~~~~~~--------------~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-- 282 (476)
T PLN00028 234 -----------GTMPKDS--------------FSKVLRYGVTNYR----TWILALTYGYSFGVELTMDNIIAEYFYDR-- 282 (476)
T ss_pred -----------Ccccccc--------------HHHHHHHHHcCch----hHHHHHHHHHHHHHHHHHHhHHHHHHHHh--
Confidence 0000000 0001111 11122 12222222222222333333333222110
Q ss_pred CCcccccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHH-------HHHHHHHHHHHHHHHHHhhhhhHHHHHH
Q 015377 230 CSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKL-------SMTIMFIFVCIFLLPLVTLQSNILLTAL 302 (408)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (408)
.+...........+..++.++|.+++|+++||++||. .......+.++.+..+....+.......
T Consensus 283 --------~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~ 354 (476)
T PLN00028 283 --------FGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVV 354 (476)
T ss_pred --------cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHH
Confidence 0111122223344456778899999999999998762 2222222222222222222222222222
Q ss_pred HHHHHHHhhhhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhc
Q 015377 303 LSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLI 382 (408)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 382 (408)
+.+..++..+..+..+.+.+|+.| +.|+++.|+.+..+.+|++++|.+.. ..+..+....+++++++.+++.++.++.
T Consensus 355 ~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~ 432 (476)
T PLN00028 355 MILFSIFVQAACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFI 432 (476)
T ss_pred HHHHHHHHHHhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhe
Confidence 222222222333456677788765 68999999999988899988887654 1122234456777777777777666655
Q ss_pred c
Q 015377 383 P 383 (408)
Q Consensus 383 ~ 383 (408)
+
T Consensus 433 ~ 433 (476)
T PLN00028 433 H 433 (476)
T ss_pred e
Confidence 4
No 37
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.90 E-value=3.8e-21 Score=186.31 Aligned_cols=338 Identities=16% Similarity=0.201 Sum_probs=196.0
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFS----PNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFG 75 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G 75 (408)
|.|||+.+..+.++..++.++.++. .++..+.+.|++.|++.|.. +....++.|++|+++||+.+++++.+..+|
T Consensus 87 r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g 166 (438)
T TIGR00712 87 RSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIG 166 (438)
T ss_pred ccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhH
Confidence 5799999999999988888877664 56788899999999988875 345567789999999999999999999999
Q ss_pred HHHHHHHHhH-hccccchHHHHHHhhHHHHHH-HHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCC
Q 015377 76 SVSEAALAWI-VMPILTWRWLLALSAIPAFVL-LIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDG 153 (408)
Q Consensus 76 ~~l~~~l~~~-~~~~~~Wr~~f~i~~i~~~~~-~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~ 153 (408)
..+++.+... +....+||+.|++.++..++. ++..+++||+|+... ..+ .++ . ++ +
T Consensus 167 ~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~-~~~----~---~~-~---------- 224 (438)
T TIGR00712 167 GGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTPQSCG---LPP-IEE----Y---RN-D---------- 224 (438)
T ss_pred hHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcC---CCC-chh----c---cc-c----------
Confidence 9888876554 334568999999988877664 455667899876421 000 000 0 00 0
Q ss_pred CCCcccccCCCCCccccccccccccccccccchhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcc
Q 015377 154 TNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSS 233 (408)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 233 (408)
..++. ++.++. +. ..++...+ ..+.+++.+... ...+.....+++...+.|....+.
T Consensus 225 --~~~~~-~~~~~~--------~~-~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~p~~l~~~------ 281 (438)
T TIGR00712 225 --YPDDY-NEKAEQ--------EL-TAKEIFMQ-YVLPNKLLWYIA----IANVFVYLLRYGVLDWSPTYLKEV------ 281 (438)
T ss_pred --ccccc-cccccc--------cc-chHHHHHH-HHccCchHHHHH----HHHHHHHHHHHHHHHhHHHHHHHc------
Confidence 00000 000000 00 00000000 011122222211 111122233344444444433211
Q ss_pred cccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHH---HHHHHHHhh--hhhHHHHHHHHHHHH
Q 015377 234 ILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVC---IFLLPLVTL--QSNILLTALLSGARM 308 (408)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~~~ 308 (408)
.+...........+..+.++++.+++++++||+++++....+..... +....+... .+........+...+
T Consensus 282 ----~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 357 (438)
T TIGR00712 282 ----KHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGF 357 (438)
T ss_pred ----cCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHH
Confidence 00111112233344556778899999999999954321112211111 111111111 111211111111111
Q ss_pred HhhhhhhhhhhhcccccCCchhhHHHhHHHHhhhHhH-hhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccC
Q 015377 309 FSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGG-MVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 387 (408)
Q Consensus 309 ~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~-~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 387 (408)
...+..........|.+|++.|+++.|+.+.++++++ .++|.+.+.+.+..+....+.++.+..+++.+..+++.||.|
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 358 LIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred HHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 1122222223456799999999999999999999875 578999888888766666777777778888888888888876
No 38
>PRK03699 putative transporter; Provisional
Probab=99.90 E-value=6.5e-21 Score=182.16 Aligned_cols=311 Identities=14% Similarity=0.176 Sum_probs=194.2
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcch-hhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 79 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 79 (408)
|.|||+.+..+.++..++.++.++++++..+++.|+++|++.|... ....++.|+.|+++||+..+..+....+|..++
T Consensus 68 r~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~ 147 (394)
T PRK03699 68 IIPLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIF 147 (394)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHH
Confidence 5799999999999999999999999999999999999999888653 455678899999999999999888888888888
Q ss_pred HHHHhHhc-cccchHHHHHHhhHHHHHHHHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCCCCcc
Q 015377 80 AALAWIVM-PILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLD 158 (408)
Q Consensus 80 ~~l~~~~~-~~~~Wr~~f~i~~i~~~~~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (408)
+.+...+. +..+||+.|.+.+++.++..+..++ .+.|+. ++. + + +
T Consensus 148 ~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~-~~~p~~----~~~-------------------------~---~-~ 193 (394)
T PRK03699 148 PIIAAYLLARSIEWYWVYACIGLVYVAIFILTLF-SEFPAL----GKH-------------------------A---P-K 193 (394)
T ss_pred HHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHh-cCCccc----ccc-------------------------C---c-c
Confidence 87765543 4679999999888776655443332 232220 000 0 0 0
Q ss_pred cccCCCCCccccccccccccccccccchhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccccc
Q 015377 159 EEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSE 238 (408)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 238 (408)
+ ++.. .+. .+++ ..+......+.....+++...|.|.+..+..
T Consensus 194 ~------~~~~----------~~~-------~~~~----~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~---------- 236 (394)
T PRK03699 194 A------DKPV----------AKE-------KWGI----GVLFLAIAALLYILAQLTFISWVPEYAQKKF---------- 236 (394)
T ss_pred c------cCcc----------ccc-------cCCh----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------
Confidence 0 0000 000 0011 1222222223333344455555554432110
Q ss_pred CccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhh
Q 015377 239 NVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIAN 318 (408)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (408)
+.+............+...+|.++.++++||++||+.+.....+..+.+..+....+........+...++..+.++...
T Consensus 237 g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~ 316 (394)
T PRK03699 237 GMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTII 316 (394)
T ss_pred CCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 00001111112233456688999999999999999988766555444333333223222222222222233334455556
Q ss_pred hhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcc
Q 015377 319 IFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIP 383 (408)
Q Consensus 319 ~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 383 (408)
.+..|..|.+ +++..|..+.++.+|+.++|.+.+.+.+..+....+.+.+++++++.+...+..
T Consensus 317 ~~~~~~~~~~-~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (394)
T PRK03699 317 TLGSQQTKVA-SPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCILLG 380 (394)
T ss_pred HHHHHHccCC-CHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHHHH
Confidence 6677877754 677889999999999999999999888876666666666666666655555554
No 39
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.89 E-value=2.8e-20 Score=176.50 Aligned_cols=308 Identities=18% Similarity=0.157 Sum_probs=182.3
Q ss_pred CCcchhHHHH-HHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhH--HHHHHHHHHHHH
Q 015377 1 MEEGRMSILG-GALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKW--MVVFSTFWTFGS 76 (408)
Q Consensus 1 ~~gRr~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~--~~~~~~~~~~G~ 76 (408)
|.||||.++. +.++..++.++.++++|++.+++.|++.|.+.+.. +....+..|+.|+++|++. .+..+.+..+|.
T Consensus 59 r~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 138 (375)
T TIGR00899 59 YQGDRKGLILFCCLLAALACLLFAWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAW 138 (375)
T ss_pred ccCCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHH
Confidence 5788887655 45555667788899999999999999998766543 3445567788888877754 567777788999
Q ss_pred HHHHHHHhHhccccchHHHHHHhhHHHHHHHH-HHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCCC
Q 015377 77 VSEAALAWIVMPILTWRWLLALSAIPAFVLLI-FIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTN 155 (408)
Q Consensus 77 ~l~~~l~~~~~~~~~Wr~~f~i~~i~~~~~~~-~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 155 (408)
++++.++..+.+..+||+.|++.+++.++..+ ..+++||+|+....+
T Consensus 139 ~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------- 186 (375)
T TIGR00899 139 VIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPSYPRGAPGA-------------------------------- 186 (375)
T ss_pred HHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCCcccCcccc--------------------------------
Confidence 99999888887788999999999887666544 445689877521000
Q ss_pred CcccccCCCCCccccccccccccccccccchhhhcc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hccCCCCCcc
Q 015377 156 DLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRFFKTTILLWVLYFGNSFVYYGIVLLASEL-SGSQSKCSSS 233 (408)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~ 233 (408)
++ ..+ .+..+ +++.+.........+....... .+.|.. ....
T Consensus 187 --~~---~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~------ 230 (375)
T TIGR00899 187 --LT---RLE---------------------VRGLLASRDTRLLFVACTLMWGCNILYI----INMPLLIIHEL------ 230 (375)
T ss_pred --cC---cch---------------------hhhhhcCcchHHHHHHHHHHHHHHHHHH----hhhHHHHHHHc------
Confidence 00 000 00001 1111111111112221111111 111111 1000
Q ss_pred cccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhh
Q 015377 234 ILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGT 313 (408)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (408)
+.+...............+++.++.+++.||+|||+.+..+.....+.........+............+.....
T Consensus 231 -----g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 305 (375)
T TIGR00899 231 -----GLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGIL 305 (375)
T ss_pred -----CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 011111111222333455677889999999999999887665544443333222222222222212222222223
Q ss_pred hhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhc
Q 015377 314 FIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLI 382 (408)
Q Consensus 314 ~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 382 (408)
.+....+..|..|.+ |+++.|+.+...++|+.++|.+.+.+.+..+....+.+.+++++++.+...+.
T Consensus 306 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 373 (375)
T TIGR00899 306 AGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLLI 373 (375)
T ss_pred HHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhee
Confidence 355567778999876 56999999999999999999999887776665566666666666666554443
No 40
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.89 E-value=1.9e-20 Score=175.42 Aligned_cols=289 Identities=27% Similarity=0.376 Sum_probs=206.4
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 79 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 79 (408)
|.|||+.+..+..+..++.++..+.+++..+++.|++.|++.+.. +....++.|+.|+++|++..+..+....+|..++
T Consensus 60 ~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 139 (352)
T cd06174 60 RFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLG 139 (352)
T ss_pred HhCCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHH
Confidence 579999999999999999999999999999999999999998875 4556788999999999999999999999999999
Q ss_pred HHHHhHhccccchHHHHHHhhHHHHHHHHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCCCCccc
Q 015377 80 AALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDE 159 (408)
Q Consensus 80 ~~l~~~~~~~~~Wr~~f~i~~i~~~~~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (408)
+.++..+.+..+||+.+++.+++.++..+...+++ |+
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----------------------------------------- 176 (352)
T cd06174 140 PLLGGLLAESLGWRWLFLILAILGLLLALLLLFLL--RL----------------------------------------- 176 (352)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH--HH-----------------------------------------
Confidence 99998888888899999998887766655544433 00
Q ss_pred ccCCCCCccccccccccccccccccchhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccC
Q 015377 160 EFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSEN 239 (408)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 239 (408)
........+.....+.....+.+....+. .+
T Consensus 177 ---------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~ 207 (352)
T cd06174 177 ---------------------------------------LLLLALAFFLLSFGYYGLLTYLPLYLQEV----------LG 207 (352)
T ss_pred ---------------------------------------HHHHHHHHHHHHhHHHHHHHHHHHHHHHh----------cC
Confidence 00111111112222222222222222110 01
Q ss_pred ccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHH-HHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhh
Q 015377 240 VQDASVYINVFITSFAELPGLLTAALLVDRVGRKL-SMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIAN 318 (408)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (408)
.+............+..+++.++.+++.||.|||+ .+..+..+..+.........+............+......+...
T Consensus 208 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 287 (352)
T cd06174 208 LSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALL 287 (352)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhHH
Confidence 11222333445556778889999999999999999 77777666655554444333322222222233333344557778
Q ss_pred hhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHh
Q 015377 319 IFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILL 381 (408)
Q Consensus 319 ~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 381 (408)
.+..|..|.+.|+++.|+.+....+++.++|.+.+.+.+..+....+.+.+++.+++.+..++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 288 TLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLLL 350 (352)
T ss_pred HHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhee
Confidence 899999999999999999999999999999999988877666667778888887777665544
No 41
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.89 E-value=2.8e-20 Score=175.54 Aligned_cols=294 Identities=13% Similarity=0.128 Sum_probs=184.5
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhh-----hHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSP-----NYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTF 74 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~ 74 (408)
|.|||+.++.+.++..++.++.++.+ +++.+++.|++.|++.+.. +....++.|+.|+++|++..+..+.+..+
T Consensus 60 r~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (365)
T TIGR00900 60 RYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSL 139 (365)
T ss_pred hhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHH
Confidence 57999999999999998888888887 9999999999999998875 45567889999999999999999999999
Q ss_pred HHHHHHHHHhHhccccchHHHHHHhhHHHHHHHHHHHhc--cCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCC
Q 015377 75 GSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFM--PESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSD 152 (408)
Q Consensus 75 G~~l~~~l~~~~~~~~~Wr~~f~i~~i~~~~~~~~~~~l--pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~ 152 (408)
|.++++.++..+.+..+||+.|++.++..++..+..+.+ ||+++. ++.+
T Consensus 140 g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~------------------------- 190 (365)
T TIGR00900 140 FYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPELAAS----EIQA------------------------- 190 (365)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccCCCc----cccc-------------------------
Confidence 999999998888888899999998877665544433332 332110 0000
Q ss_pred CCCCcccccCCCCCccccccccccccccccccchhhhccchhhHHHHHHHHHHHHHHHHHHHHHH-HHHHhhhccCCCCC
Q 015377 153 GTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIV-LLASELSGSQSKCS 231 (408)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~ 231 (408)
.+ ++ ..+ + .+ ...+.+++++........... ....+++.. .+.|....+.
T Consensus 191 ----~~-------~~-~~~----~---~~---~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~---- 241 (365)
T TIGR00900 191 ----LS-------NA-VLR----D---TR---EGIKFVLKNPLLRTLLLLALL---FNLVFAPAIVALFPYVQSKY---- 241 (365)
T ss_pred ----cc-------hh-HHH----H---HH---hHHHHHHcCcHHHHHHHHHHH---HHHHHHHHHHHHhHHHHHHH----
Confidence 00 00 000 0 00 011122222222212111111 111111111 2222221100
Q ss_pred cccccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHHHHh
Q 015377 232 SSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQS-NILLTALLSGARMFS 310 (408)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 310 (408)
.+.+............+..+++.++.+++.||.+||+.+..+....++.........+ ............+..
T Consensus 242 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 315 (365)
T TIGR00900 242 ------LGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGY 315 (365)
T ss_pred ------hCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHH
Confidence 0011112223334445677888999999999999999887765555444443333222 222222222222222
Q ss_pred hhhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhh
Q 015377 311 MGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS 358 (408)
Q Consensus 311 ~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~ 358 (408)
....+....+..|..|++.|+++.|+.+.+..+++.++|.+.+.+.+.
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~ 363 (365)
T TIGR00900 316 GPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADH 363 (365)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 233456678889999999999999999999999999999998877664
No 42
>PRK12382 putative transporter; Provisional
Probab=99.88 E-value=4.4e-20 Score=176.40 Aligned_cols=304 Identities=19% Similarity=0.075 Sum_probs=184.5
Q ss_pred CCcchhHHHHHHHHHHHHHHHH---h-----hhhhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLS---A-----FSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTF 71 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~---~-----~~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~ 71 (408)
|.|||+.++.+.+...++.+.. + ..++++.++++|+++|++.+.. +....+..|..|+++|+++++..+.+
T Consensus 77 r~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~ 156 (392)
T PRK12382 77 QYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMA 156 (392)
T ss_pred hhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHH
Confidence 5799999999888777655422 2 2368899999999999998765 34556788999999999999999999
Q ss_pred HHHHHHHHHHHHhHhccccchHHHHHHhhHHHHHHHHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccC
Q 015377 72 WTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTS 151 (408)
Q Consensus 72 ~~~G~~l~~~l~~~~~~~~~Wr~~f~i~~i~~~~~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~ 151 (408)
..+|..++++++..+.+..+||+.+.+..+..++........||.|..
T Consensus 157 ~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------- 204 (392)
T PRK12382 157 MYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAWAFNGTVRKVPAH-------------------------------- 204 (392)
T ss_pred HHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHhccCCCCC--------------------------------
Confidence 999999999998887777899998776655443332222222332110
Q ss_pred CCCCCcccccCCCCCccccccccccccccccccchhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 015377 152 DGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCS 231 (408)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 231 (408)
++ ++.+. ++ ..+ ..++....... ....+.....+.+....+.+
T Consensus 205 ------~~-----~~~~~-----------~~---~~~-----~~~~~~~~~~l----~~~~~~~~~~~~~~~~~~~~--- 247 (392)
T PRK12382 205 ------AG-----ERPSL-----------WS---VVG-----LIWKPGLGLAL----QGVGFAVIGTFVSLYFASKG--- 247 (392)
T ss_pred ------cc-----cCchH-----------HH---HHH-----HHHHhHHHHHH----HHHHHhHHHHHHHHHHHhcC---
Confidence 00 00000 00 000 11111111111 11112122222221111100
Q ss_pred cccccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhh
Q 015377 232 SSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSM 311 (408)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (408)
.... ........+..+++.++.+++.||+|||+.+..+..+..+.........+.........+..+...
T Consensus 248 --------~~~~--~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~ 317 (392)
T PRK12382 248 --------WAMA--GFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCS 317 (392)
T ss_pred --------Cchh--HHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHH
Confidence 0011 112223345567888999999999999988877655554443333332322222111111112112
Q ss_pred hhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcc
Q 015377 312 GTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIP 383 (408)
Q Consensus 312 ~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 383 (408)
...+.......|.+|.+.|+++.|+.+....+|+.++|.+.+.+.+..+....+.+.+.+.+++.+..++..
T Consensus 318 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 389 (392)
T PRK12382 318 LIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILSF 389 (392)
T ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhhc
Confidence 223445556688999999999999999999999999999999888877766677777777777766666553
No 43
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.88 E-value=1.8e-19 Score=176.50 Aligned_cols=314 Identities=18% Similarity=0.144 Sum_probs=192.2
Q ss_pred CcchhH-HHHHHHHHHHHHHHHhhh---hhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHH
Q 015377 2 EEGRMS-ILGGALVTFVAGLLSAFS---PNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGS 76 (408)
Q Consensus 2 ~gRr~~-~~~~~~~~~~~~~~~~~~---~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~ 76 (408)
.|||+. +..+.+...++..+.++. +++..+.+.|++.|++.+.. .....+..|++|+++||+..++...++.+|.
T Consensus 77 ~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~ 156 (491)
T PRK11010 77 LGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAM 156 (491)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHH
Confidence 399986 556666666776777675 47888999999999877654 4556788999999999999999999999999
Q ss_pred HHHHHHHhHhcc-ccchHHHHHHhhHHHHHHHHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCCC
Q 015377 77 VSEAALAWIVMP-ILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTN 155 (408)
Q Consensus 77 ~l~~~l~~~~~~-~~~Wr~~f~i~~i~~~~~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 155 (408)
++++.+...+.+ ..|||..|++.++..++..+..++.||+|+.. +.++.
T Consensus 157 llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~~~e~~~~~----~~~~~-------------------------- 206 (491)
T PRK11010 157 LVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLLAPEPTDTI----PVPKT-------------------------- 206 (491)
T ss_pred HHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHhcCCCcccc----ccccc--------------------------
Confidence 999988887777 56999999998887776666666678875410 00000
Q ss_pred CcccccCCCCCccccccccccccccccccchhhhccc-hhhHHHHHHHHHHHHHHHHHHHHHH-HHHHhhhccCCCCCcc
Q 015377 156 DLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFS-PRFFKTTILLWVLYFGNSFVYYGIV-LLASELSGSQSKCSSS 233 (408)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~ 233 (408)
.++ . ....++++++ ++.+. .....+.+. ...+... ...+.+....
T Consensus 207 --------~~~-~--------------~~~~l~~~~~~~~~~~-~ll~~~l~~---~~~~~~~~~~~~~l~~~~------ 253 (491)
T PRK11010 207 --------LEQ-A--------------VVAPLRDFFGRNNAWL-ILLLIVLYK---LGDAFAMSLTTTFLIRGV------ 253 (491)
T ss_pred --------hhh-h--------------HHHHHHHHHcCcCHHH-HHHHHHHHH---HHHHHHHHHHHHHHHHhc------
Confidence 000 0 0001112222 22222 111111111 1111111 1122221110
Q ss_pred cccccCccchhHHHH-HHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH---HHhhhhhH-HHHHHHHHHHH
Q 015377 234 ILLSENVQDASVYIN-VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLP---LVTLQSNI-LLTALLSGARM 308 (408)
Q Consensus 234 ~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~ 308 (408)
+.+....... .....+..++|.+++++++||+|||+.+..+.+...+.... +....++. ......+...+
T Consensus 254 -----G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~ 328 (491)
T PRK11010 254 -----GFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENL 328 (491)
T ss_pred -----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHH
Confidence 1111122222 23444677899999999999999988776544433322211 11211121 11111111111
Q ss_pred HhhhhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcc
Q 015377 309 FSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIP 383 (408)
Q Consensus 309 ~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 383 (408)
+........+.+..++.|.+.+++..|+.++...+|+.+.+.+.+.+.+..+....|.+.+++++++.+..++++
T Consensus 329 ~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 329 CGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred HHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 111223445777889999999999999999999999888887888888877766667777788888777776664
No 44
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.88 E-value=9.3e-21 Score=179.62 Aligned_cols=310 Identities=16% Similarity=0.249 Sum_probs=181.5
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 79 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 79 (408)
|.|||+.+..+.++..++.++.++++++..+++.|++.|++.|.. +....++.|+.|+++|++..++.+.+..+|..++
T Consensus 56 r~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 135 (379)
T TIGR00881 56 RSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLL 135 (379)
T ss_pred hhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHH
Confidence 579999999999999999999999999999999999999998875 4566788999999999999999999999999999
Q ss_pred H-HHHhHhccccchHHHHHHhhHHHHHH-HHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCCCCc
Q 015377 80 A-ALAWIVMPILTWRWLLALSAIPAFVL-LIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDL 157 (408)
Q Consensus 80 ~-~l~~~~~~~~~Wr~~f~i~~i~~~~~-~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 157 (408)
+ .+...+.+..+||+.|++.++..++. .+..++.||+|+.. ++.++ + +.. + ++.
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--------------~--~~~---~--~~~ 191 (379)
T TIGR00881 136 PPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRDSPQSC---GLPPA--------------E--EMP---N--EEP 191 (379)
T ss_pred HHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeCCCcccc---ccCcc--------------c--cCc---c--ccc
Confidence 9 46666666789999999887766554 44556678876521 00000 0 000 0 000
Q ss_pred ccccCCCCCccccccccccccccccccchhhhcc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015377 158 DEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILL 236 (408)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 236 (408)
+++.+ +++ +.. ..++ ...+.++ ++..+. .....+......++...+.|....+.
T Consensus 192 ~~~~~--~~~-------~~~-~~~~--~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 246 (379)
T TIGR00881 192 DGDAE--KKE-------EEL-TKKQ--IFLQYVLLNKVLWY----ISLGYVFVYVVRTGILDWSPLYLTQE--------- 246 (379)
T ss_pred ccccc--ccc-------ccc-cchH--HHHHHHHhcchHHH----HHHHHHHHHHHHHHHHHHHHHHHHHH---------
Confidence 00000 000 000 0000 0111111 222221 11222222222222222333221100
Q ss_pred ccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhc-hHH-HHHHHHHHHH-HHHHHHHh--hhhhHHHHHHHHHHHHHhh
Q 015377 237 SENVQDASVYINVFITSFAELPGLLTAALLVDRVG-RKL-SMTIMFIFVC-IFLLPLVT--LQSNILLTALLSGARMFSM 311 (408)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~g-rR~-~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 311 (408)
.+.+............+.+++|.++.+++.||.. ||+ .......... +.+..... ..+........+...++..
T Consensus 247 -~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 325 (379)
T TIGR00881 247 -KGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVY 325 (379)
T ss_pred -hCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHh
Confidence 0011112222334445677889999999999863 333 2222111111 11111111 1111111112222222233
Q ss_pred hhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcc
Q 015377 312 GTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH 360 (408)
Q Consensus 312 ~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~ 360 (408)
+.....+.+.+|.+|++.|+++.|+.+.++.+|+.++|.+.+.+.+..+
T Consensus 326 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g 374 (379)
T TIGR00881 326 GPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFG 374 (379)
T ss_pred hhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhc
Confidence 4445556788999999999999999999999999999999988877654
No 45
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.87 E-value=5e-20 Score=180.99 Aligned_cols=328 Identities=13% Similarity=0.155 Sum_probs=191.7
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 79 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 79 (408)
|.|||+.++.+.++..++.+++++++|+..++++|+++|++.|.. +....++.|++|+++||+..++++....+|..++
T Consensus 63 r~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g 142 (485)
T TIGR00711 63 RFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALG 142 (485)
T ss_pred HhCcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhh
Confidence 579999999999999999999999999999999999999998875 4566788999999999999999999999999999
Q ss_pred HHHHhHhccccchHHHHHHhhHHHHHHH-HHHHhccCcchhHhhcCChhhHHHHHHHHH------HHcCCCCCCCCccCC
Q 015377 80 AALAWIVMPILTWRWLLALSAIPAFVLL-IFIVFMPESPRYLCTKGRITDAHNILDKIA------QFNQTSLPSGNLTSD 152 (408)
Q Consensus 80 ~~l~~~~~~~~~Wr~~f~i~~i~~~~~~-~~~~~lpESp~~l~~~~~~~~a~~~l~~~~------~~~~~~~~~~~~~~~ 152 (408)
+.++..+.++.+||+.|++.+.+.++.. +..+++||+++- .+++.|.....+.... .....+. .
T Consensus 143 ~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~g~~l~~~~~~~~~~~~~~~~~--~----- 213 (485)
T TIGR00711 143 PTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPA--ASENFDFLGLLLLSVGLGSLLYGLSEGPE--R----- 213 (485)
T ss_pred hccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCcccc--ccCCCcHHHHHHHHHHHHHHHHHHhhCCC--C-----
Confidence 9999888888999999999887766553 345567775541 1222222211111000 0000000 0
Q ss_pred CCCCcccccCCCCCccccc-------cccccccccccccchhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015377 153 GTNDLDEEFSTSEETPLLS-------SARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSG 225 (408)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 225 (408)
+..++.+...... .....+...+++....+.+.+++.+...+.. +...+.+++...+.|....
T Consensus 214 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~p~~~~ 283 (485)
T TIGR00711 214 ------GWFDSNEILILSITGLVAIIAFVVWELTDDNPLVDLRLFKYRNFTIGCVYM----SLLGLGLYGSFYLLPLYLQ 283 (485)
T ss_pred ------CCCCchHHHHHHHHHHHHHHHHHHHHHcCCCCccCHHHHcCCChHHHHHHH----HHHHHHHHHHHHHHHHHHH
Confidence 0000000000000 0000000001111111222233333222222 2222233333333333221
Q ss_pred cCCCCCcccccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh-h--hhhH-HHHH
Q 015377 226 SQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT-L--QSNI-LLTA 301 (408)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~-~--~~~~-~~~~ 301 (408)
+. .+.+............+..+++.++.+++.||+|||+.+..+.....+....+.. . ..+. ....
T Consensus 284 ~~----------~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (485)
T TIGR00711 284 QV----------LGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIAL 353 (485)
T ss_pred Hh----------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHH
Confidence 10 0011112223334455677889999999999999999887766555544333331 1 1111 1111
Q ss_pred HHHHHHHHhhhhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhh
Q 015377 302 LLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVT 357 (408)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~ 357 (408)
......+.....+........|..|++.|+++.|+.+....+|+.+++.+.+.+.+
T Consensus 354 ~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~ 409 (485)
T TIGR00711 354 PQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILT 409 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11112222112223344455688899999999999999999999999888876665
No 46
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.87 E-value=4e-19 Score=169.75 Aligned_cols=312 Identities=13% Similarity=0.144 Sum_probs=175.0
Q ss_pred CCcchhHH-HHHHHHHHHHHHHHhhhhhHHHHHHHHHHh-hccCCcchhhhHHHhhhcCCCcc--hhHHHHHHHHHHHHH
Q 015377 1 MEEGRMSI-LGGALVTFVAGLLSAFSPNYISLLILRGLA-GAGLGSGHVFFSWFMEFVPPSNR--GKWMVVFSTFWTFGS 76 (408)
Q Consensus 1 ~~gRr~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~-Gi~~g~~~~~~~~~~E~~p~~~R--g~~~~~~~~~~~~G~ 76 (408)
|.||||.+ ..+.+...++..+.+++++++.+++.+.+. |.+....+....+..|+.|+++| +...+..+.+.++|.
T Consensus 77 r~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~ 156 (393)
T PRK15011 77 KRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAW 156 (393)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHH
Confidence 56898875 455566667777788999999876665544 44433334445566787777666 345578888999999
Q ss_pred HHHHHHHhHhccccchHHHHHHhhHHHHHHH-HHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCCC
Q 015377 77 VSEAALAWIVMPILTWRWLLALSAIPAFVLL-IFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTN 155 (408)
Q Consensus 77 ~l~~~l~~~~~~~~~Wr~~f~i~~i~~~~~~-~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 155 (408)
+++++++..+.++.|||+.|++.++..++.. +...++||+|+- + + ++
T Consensus 157 ~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~---~-~-~~--------------------------- 204 (393)
T PRK15011 157 VIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKE---L-P-LA--------------------------- 204 (393)
T ss_pred HHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccCCC---C-c-cc---------------------------
Confidence 9999999988888899999998887766553 445567876530 0 0 00
Q ss_pred CcccccCCCCCccccccccccccccccccchhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015377 156 DLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSIL 235 (408)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 235 (408)
++ +.+.. + ++ .++.+.........+ ..++....+.|....+.
T Consensus 205 --~~-----~~~~~------~----~~---------~~~~~~~~~~~~~~~----~~~~~~~~~~p~~l~~~-------- 246 (393)
T PRK15011 205 --TG-----TLEAP------R----RN---------RRDTLLLFVICTLMW----GTNSLYIINMPLFIINE-------- 246 (393)
T ss_pred --cc-----ccccc------c----cc---------cccHHHHHHHHHHHH----HHHHHHHHHHHHHHHHH--------
Confidence 00 00000 0 00 000111111111111 11111112222211100
Q ss_pred cccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhh
Q 015377 236 LSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFI 315 (408)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (408)
.+.+...............+++.++.++++||+|||+.+..+.....+........++............+......+
T Consensus 247 --~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~ 324 (393)
T PRK15011 247 --LHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGG 324 (393)
T ss_pred --cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 001111111122233455677889999999999999877665444333322222222222211111111111111123
Q ss_pred hhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhccccc
Q 015377 316 IANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 386 (408)
Q Consensus 316 ~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et 386 (408)
....+..|.+|.+ |+++.++.+....+|+.++|.+.+.+.+..+....+.+.+++++++.+..++. |||
T Consensus 325 ~~~~~~~~~~p~~-~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~ 393 (393)
T PRK15011 325 IGMLYFQDLMPGQ-AGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI-KDV 393 (393)
T ss_pred HHHHHHHHhCCCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh-cCC
Confidence 3455668999975 99999999998899999999999888776555555555566666665555544 554
No 47
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.87 E-value=1.8e-19 Score=172.93 Aligned_cols=316 Identities=15% Similarity=0.117 Sum_probs=193.5
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcchhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEA 80 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~ 80 (408)
|.|||+.++.+.++..++.++.++.++++.+++.|++.|++.+..+....++.|..|+++|++..+..+....+|.++++
T Consensus 80 r~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 159 (408)
T PRK09874 80 RKGRKIMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGLLGGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGP 159 (408)
T ss_pred hhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHH
Confidence 57999999999999999888888999999999999999997554444455778999999999999999999999999999
Q ss_pred HHHhHhccccchHHHHHHhhHHHHHHHH-HHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCCCCccc
Q 015377 81 ALAWIVMPILTWRWLLALSAIPAFVLLI-FIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDE 159 (408)
Q Consensus 81 ~l~~~~~~~~~Wr~~f~i~~i~~~~~~~-~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (408)
.++..+.+..+||+.|++.++..++..+ ..+++||+++-. ++.+ ....+
T Consensus 160 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~------------------------- 209 (408)
T PRK09874 160 LAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIRENFQPV---SKKE--MLHMR------------------------- 209 (408)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCcccc---cchh--hhHHH-------------------------
Confidence 9988887788999999998877655433 445566653210 0000 00000
Q ss_pred ccCCCCCccccccccccccccccccchhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccC
Q 015377 160 EFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSEN 239 (408)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 239 (408)
+ ....+.+++.+.......... .........+.+....+.. ..
T Consensus 210 ----------------~---------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~---------~~ 252 (408)
T PRK09874 210 ----------------E---------VVTSLKNPKLVLSLFVTTLII---QVATGSIAPILTLYVRELA---------GN 252 (408)
T ss_pred ----------------H---------HHHhCcCCchHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHh---------cc
Confidence 0 000111122222111111111 0111011011110000000 00
Q ss_pred ccch--hHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhh
Q 015377 240 VQDA--SVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIA 317 (408)
Q Consensus 240 ~~~~--~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (408)
.... .......+..+..+++....++++||+|||+.+..+.....+..+......+............++.....+..
T Consensus 253 ~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 332 (408)
T PRK09874 253 VSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAV 332 (408)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHH
Confidence 0000 01111222345566777888999999999998877666554444333333322222222222222222233444
Q ss_pred hhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcc
Q 015377 318 NIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIP 383 (408)
Q Consensus 318 ~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 383 (408)
.....|..|.+.|++..++.+.+..+|..++|.+.+.+.+..+....+.+.+++.+++.+..++..
T Consensus 333 ~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~ 398 (408)
T PRK09874 333 QTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSL 398 (408)
T ss_pred HHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 555678889999999999999999999999999988877766666777777777777766665543
No 48
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.87 E-value=8.3e-19 Score=167.56 Aligned_cols=117 Identities=20% Similarity=0.270 Sum_probs=100.1
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcch-hhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 79 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 79 (408)
|.|||+.++.+.++..++.++..+++++..+++.|+++|++.+... ....++.|..|+++|++..+..+....+|..++
T Consensus 64 r~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~ 143 (392)
T PRK10473 64 RSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLA 143 (392)
T ss_pred HhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5799999999999999999999999999999999999999988753 456678999999999999999999999999999
Q ss_pred HHHHhHhccccchHHHHHHhhHHHHHH-HHHHHhccCcc
Q 015377 80 AALAWIVMPILTWRWLLALSAIPAFVL-LIFIVFMPESP 117 (408)
Q Consensus 80 ~~l~~~~~~~~~Wr~~f~i~~i~~~~~-~~~~~~lpESp 117 (408)
+.++..+.+..+||+.|++.++..++. .+..+.+||++
T Consensus 144 ~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 182 (392)
T PRK10473 144 PVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETR 182 (392)
T ss_pred HHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 988887777789999999988766554 34456677764
No 49
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.87 E-value=9.9e-19 Score=166.91 Aligned_cols=117 Identities=24% Similarity=0.315 Sum_probs=101.1
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 79 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 79 (408)
|.|||+.++.+.++..++.++.++++|++.+++.|+++|++.|.. +....++.|++|+++|++..+......++|.+++
T Consensus 81 r~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig 160 (394)
T PRK10213 81 ATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIA 160 (394)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHH
Confidence 579999999999999999999999999999999999999999875 4556678899999999999999999999999999
Q ss_pred HHHHhHhccccchHHHHHHhhHHHHHHHH-HHHhccCcc
Q 015377 80 AALAWIVMPILTWRWLLALSAIPAFVLLI-FIVFMPESP 117 (408)
Q Consensus 80 ~~l~~~~~~~~~Wr~~f~i~~i~~~~~~~-~~~~lpESp 117 (408)
+.++..+.+..+||+.|++.++..++..+ .....||+|
T Consensus 161 ~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~ 199 (394)
T PRK10213 161 APLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLP 199 (394)
T ss_pred HHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCC
Confidence 99999888888999999998776655433 333467654
No 50
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.87 E-value=4.2e-19 Score=168.95 Aligned_cols=306 Identities=12% Similarity=0.069 Sum_probs=181.6
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcch-hhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 79 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 79 (408)
|.|||+++.++.++..++.++.++++|++.+++.|++.|++.|... ....++.|+.|+++|++.++.+..+..+|..++
T Consensus 64 r~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 143 (382)
T PRK10091 64 RYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLG 143 (382)
T ss_pred cCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHh
Confidence 5799999999999999999999999999999999999999988753 445567899999999999999999999999999
Q ss_pred HHHHhHhccccchHHHHHHhhHHHHHHH-HHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCCCCcc
Q 015377 80 AALAWIVMPILTWRWLLALSAIPAFVLL-IFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLD 158 (408)
Q Consensus 80 ~~l~~~~~~~~~Wr~~f~i~~i~~~~~~-~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (408)
++++..+.+..+||+.|++.++..++.. ..+.++||.++ +.+.+ . +
T Consensus 144 ~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~----~~~~~-~----------------------------~ 190 (382)
T PRK10091 144 IPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIRD----EAKGG-L----------------------------R 190 (382)
T ss_pred ccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCCc----ccccC-H----------------------------H
Confidence 9988887777899999999887665543 34556777532 00000 0 0
Q ss_pred cccCCCCCccccccccccccccccccchhhhccchhhHHHHHHHHHHHHHHHHHHHHH-HHHHHhhhccCCCCCcccccc
Q 015377 159 EEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGI-VLLASELSGSQSKCSSSILLS 237 (408)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~ 237 (408)
+ ..+.+.+++.+. .....+......+.. .+..+.+....
T Consensus 191 ----------------~----------~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 230 (382)
T PRK10091 191 ----------------E----------QFHFLRSPAPWL----IFAATMFGNAGVFAWFSYIKPYMMFIS---------- 230 (382)
T ss_pred ----------------H----------HHHHhcChHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhc----------
Confidence 0 000111111111 111111111111111 11112221100
Q ss_pred cCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh-hhhhHHHHHHHHHHHHHhhhhhh-
Q 015377 238 ENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT-LQSNILLTALLSGARMFSMGTFI- 315 (408)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~- 315 (408)
+.+............+..+++.++.+++.||+|+|+.+..+..+..+..+.+.. .++................+..+
T Consensus 231 -g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 309 (382)
T PRK10091 231 -GFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAP 309 (382)
T ss_pred -CCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHH
Confidence 111112223334455778899999999999999998887665554443322222 22222211111111111111112
Q ss_pred hhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhc-chhhHHHHHHHHHHHHHHHHHhc
Q 015377 316 IANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSC-HQTAAILLLEALIVLSVVVILLI 382 (408)
Q Consensus 316 ~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~-~~~~~~~~~~~~~~i~~~~~~~~ 382 (408)
.......+..|.+.++.+ ..+....+|+.++|.+.+.+.+.. +....+.+.+..+++......++
T Consensus 310 ~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (382)
T PRK10091 310 LQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLY 375 (382)
T ss_pred HHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHH
Confidence 222344555666655554 346667789999999998888753 34445555555554444444444
No 51
>PRK10504 putative transporter; Provisional
Probab=99.86 E-value=2e-18 Score=169.00 Aligned_cols=333 Identities=14% Similarity=0.111 Sum_probs=184.6
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 79 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 79 (408)
+.|||+.++.+.++..++.++++++++++.+++.|+++|++.|.. +....++.|+.|+++|++..++.+....+|..++
T Consensus 71 ~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 150 (471)
T PRK10504 71 RVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLG 150 (471)
T ss_pred HhchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhh
Confidence 469999999999999999988999999999999999999999875 4556678899999999999999999999999999
Q ss_pred HHHHhHhccccchHHHHHHhhHHHHHHHH-HHHhccCcchhHhhcCChhhHHHHHHHHHH------HcCCCCCCCCccCC
Q 015377 80 AALAWIVMPILTWRWLLALSAIPAFVLLI-FIVFMPESPRYLCTKGRITDAHNILDKIAQ------FNQTSLPSGNLTSD 152 (408)
Q Consensus 80 ~~l~~~~~~~~~Wr~~f~i~~i~~~~~~~-~~~~lpESp~~l~~~~~~~~a~~~l~~~~~------~~~~~~~~~~~~~~ 152 (408)
+.++..+.+..+||+.|.+......+..+ .....||++. ++.|.+.+.....-... .++.+ ...
T Consensus 151 ~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~---~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~----- 221 (471)
T PRK10504 151 PALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYTM---QTRRFDLSGFLLLAVGMATLTLALDGSK-GLG----- 221 (471)
T ss_pred hHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCccc---cCCCCChHHHHHHHHHHHHHHHHHhcCC-cCC-----
Confidence 99998888888999999987665544433 3445565442 22333333221111100 00000 000
Q ss_pred CCCCcccccCCC-CCccc-cccccccccccccccchhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCC
Q 015377 153 GTNDLDEEFSTS-EETPL-LSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKC 230 (408)
Q Consensus 153 ~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 230 (408)
........... ..... .-..+++ ..+++..+.+.+.+++++.......+..+......+...++.....
T Consensus 222 -~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------ 292 (471)
T PRK10504 222 -LSPLAIAGLVAVGVVALLLYLLHAR--NNNRALFSLKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGL------ 292 (471)
T ss_pred -cchHHHHHHHHHHHHHHHHHHHHHh--cCCCCccCHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------
Confidence 00000000000 00000 0000000 0000011122222333322211112222222111111112211111
Q ss_pred CcccccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh--hhhHH-HHHHHHHHH
Q 015377 231 SSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL--QSNIL-LTALLSGAR 307 (408)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~ 307 (408)
+..............+..+++..+.+.+.||+|||+.+..+..+..+....+... .+... .........
T Consensus 293 --------g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 364 (471)
T PRK10504 293 --------GFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQG 364 (471)
T ss_pred --------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHH
Confidence 0111111222233345556677889999999999999877666554443333221 11111 111111111
Q ss_pred HHhhhhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhc
Q 015377 308 MFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSC 359 (408)
Q Consensus 308 ~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~ 359 (408)
+.....++.......+.+|.+.|+++.|+.+...++|+.++|.+.+.+.+..
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~ 416 (471)
T PRK10504 365 MVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLF 416 (471)
T ss_pred HHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2222233455667778999999999999999999999999988877665543
No 52
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.86 E-value=8.4e-20 Score=171.43 Aligned_cols=287 Identities=25% Similarity=0.377 Sum_probs=178.7
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 79 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 79 (408)
|.|||++++.+.++..++..+..+++|++.+++.|++.|++.+.. +....++.|+.|+++|++..+..+....+|.+++
T Consensus 58 r~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g 137 (352)
T PF07690_consen 58 RFGRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILG 137 (352)
T ss_dssp HS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcc
Confidence 479999999999999999666667788889999999999998765 4567789999999999999999999999999999
Q ss_pred HHHHhHhccccchHHHHHHhhHHHHHHHH-HHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCCCCcc
Q 015377 80 AALAWIVMPILTWRWLLALSAIPAFVLLI-FIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLD 158 (408)
Q Consensus 80 ~~l~~~~~~~~~Wr~~f~i~~i~~~~~~~-~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (408)
+.++..+.+..+||+.|++.++..++..+ ...+++|+|+....+. +
T Consensus 138 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~---------------------------------~ 184 (352)
T PF07690_consen 138 PLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEPPPPRERES---------------------------------P 184 (352)
T ss_dssp HHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---STTTT--S---------------------------------S
T ss_pred cchhhhhhhccccccccccccchhhhhhhhHhhhhhhccccccccc---------------------------------c
Confidence 99999888888999999999888777654 3455565544110000 0
Q ss_pred cccCCCCCccccccccccccccccccch-hhhccchh-hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015377 159 EEFSTSEETPLLSSARKRTTVRKSGFSS-FLMLFSPR-FFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILL 236 (408)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 236 (408)
+ +++ + +.+++..+ ++.+++++ .+ ......+...+.++....+.|......
T Consensus 185 ~-----~~~---~-------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~--------- 236 (352)
T PF07690_consen 185 K-----ESE---S-------KKPKPLKPGFKSLFKNPVLW----ILLIAFFLFFFVFSGFSFFLPLYLQEV--------- 236 (352)
T ss_dssp T-----TTT------------HHHCCCH-CTHHHHHHCCH----HHHHHHHHHHHHHHHHHHHHHHHCCHH---------
T ss_pred c-----ccc---c-------ccccccccccccccccchhh----hhhhhhhHHHHHHHHhhcccchhhhhc---------
Confidence 0 000 0 00000011 11222221 22 122222222333333444444321100
Q ss_pred ccCcc-chhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh---hhhhHHHHHHHHHHHHHhhh
Q 015377 237 SENVQ-DASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT---LQSNILLTALLSGARMFSMG 312 (408)
Q Consensus 237 ~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 312 (408)
.+.+ .........+..+.++++.++.++++||+++|+..........+....+.. ..+............++...
T Consensus 237 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 315 (352)
T PF07690_consen 237 -LGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGI 315 (352)
T ss_dssp -HHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHH
T ss_pred -cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 0111 122222234455667778999999999999877665544444333333222 11222222222222233333
Q ss_pred hhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHH
Q 015377 313 TFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCP 349 (408)
Q Consensus 313 ~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p 349 (408)
..+....+..|.+|++.|+++.|+.+.+..+++.++|
T Consensus 316 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 316 VFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 4577788899999999999999999999999999887
No 53
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.86 E-value=3.9e-18 Score=162.33 Aligned_cols=117 Identities=18% Similarity=0.290 Sum_probs=101.2
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 79 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 79 (408)
|.|||+.+..+.++..++.++.++++++..+++.|++.|++.+.. +....++.|+.|+++|++..+..+....+|..++
T Consensus 66 ~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 145 (385)
T TIGR00710 66 RYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVA 145 (385)
T ss_pred hcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHH
Confidence 579999999999999999999999999999999999999998875 4556788999999999999999999999999999
Q ss_pred HHHHhHhccccchHHHHHHhhHHHHHHH-HHHHhccCcc
Q 015377 80 AALAWIVMPILTWRWLLALSAIPAFVLL-IFIVFMPESP 117 (408)
Q Consensus 80 ~~l~~~~~~~~~Wr~~f~i~~i~~~~~~-~~~~~lpESp 117 (408)
+.++..+.+..+||+.+++.++..++.. ...++.||++
T Consensus 146 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (385)
T TIGR00710 146 PLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETL 184 (385)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9998887778899999998877665543 3445567754
No 54
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.85 E-value=9.7e-19 Score=166.66 Aligned_cols=305 Identities=15% Similarity=0.179 Sum_probs=181.7
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhh-----hhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFS-----PNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTF 74 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~ 74 (408)
|.|+|+++.++.+++++.+++.+++ +++..+++.|++.|++ |.. .+....+++++|+++||+++++......+
T Consensus 96 r~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~ 174 (462)
T PRK15034 96 IFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNL 174 (462)
T ss_pred HhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhh
Confidence 5799999999999999999999987 8999999999999998 444 45667889999999999999999655555
Q ss_pred HHHHHHHHHhHhc------------------cccchHHHHHHhhHHHHHHHHH-HHhccCcchhHhhcCChhhHHHHHHH
Q 015377 75 GSVSEAALAWIVM------------------PILTWRWLLALSAIPAFVLLIF-IVFMPESPRYLCTKGRITDAHNILDK 135 (408)
Q Consensus 75 G~~l~~~l~~~~~------------------~~~~Wr~~f~i~~i~~~~~~~~-~~~lpESp~~l~~~~~~~~a~~~l~~ 135 (408)
|..+++.+...+. +..+||...++-.++.++..+. ++.++|.|. .+.+. +
T Consensus 175 G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~---~~~~~-------~- 243 (462)
T PRK15034 175 GVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIAS---SRASI-------A- 243 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc---cccCH-------H-
Confidence 6654444332211 1334888877766665555443 333433221 00000 0
Q ss_pred HHHHcCCCCCCCCccCCCCCCcccccCCCCCccccccccccccccccccchhhhccchhhHHHHHHHHHHHHHHHHHHHH
Q 015377 136 IAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYG 215 (408)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (408)
.....+.+++.| ++...+++..-.|.+
T Consensus 244 -------------------------------------------------~~~~vlk~~~~W----llslly~~tFG~fvg 270 (462)
T PRK15034 244 -------------------------------------------------DQLPVLQRLHLW----LLSLLYLATFGSFIG 270 (462)
T ss_pred -------------------------------------------------HHHHHhCCCchh----HHHHHHHHHHHHHHH
Confidence 001112223322 333334443334444
Q ss_pred HHHHHHhhhccCCCCCcccccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH--hh
Q 015377 216 IVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLV--TL 293 (408)
Q Consensus 216 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~--~~ 293 (408)
+..+.|.+..+. .+........++..+.+.++..++|+++||+|+|+++..+.....+...... ..
T Consensus 271 ~s~~lp~~~~~~------------~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp 338 (462)
T PRK15034 271 FSAGFAMLAKTQ------------FPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLP 338 (462)
T ss_pred HHHHHHHHHHHH------------cChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc
Confidence 444444432110 0111222223444566777889999999999999988876655444332211 11
Q ss_pred hh---hHHHHHHHHHHHHHhhh-hhhhhhhhcccccCC---------------------chhhHHHhHHHHhhhHhHhhH
Q 015377 294 QS---NILLTALLSGARMFSMG-TFIIANIFAPEIYPT---------------------SMRSTGAGVAYAVGRIGGMVC 348 (408)
Q Consensus 294 ~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~el~p~---------------------~~R~~a~gi~~~~~~~~~~~~ 348 (408)
.+ +.......+...+...| .+...+-+.+.+||. +.-+.+.|+..+.|.+|+++.
T Consensus 339 ~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~ 418 (462)
T PRK15034 339 GTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFI 418 (462)
T ss_pred cccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchh
Confidence 11 11111111222222222 234566677888885 145788899999999999999
Q ss_pred HHHHHHHhhhcchh-hHHHHHHHHHHHHHHHHHhc
Q 015377 349 PLVAVGLVTSCHQT-AAILLLEALIVLSVVVILLI 382 (408)
Q Consensus 349 p~~~~~l~~~~~~~-~~~~~~~~~~~i~~~~~~~~ 382 (408)
|.+++...+..+.+ ..+..+.+..++|.++....
T Consensus 419 p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~ 453 (462)
T PRK15034 419 PQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLV 453 (462)
T ss_pred hHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 99888777665543 34555666655555554433
No 55
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.85 E-value=4.5e-18 Score=163.32 Aligned_cols=118 Identities=19% Similarity=0.196 Sum_probs=99.1
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 79 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 79 (408)
|.|||+.++++.++..++.++.+++++++.+++.|++.|++.+.. +....++.|..|+++|++..+.......+|..++
T Consensus 74 r~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g 153 (406)
T PRK15402 74 RIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLG 153 (406)
T ss_pred HhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHH
Confidence 579999999999999999999999999999999999999998765 4556678899999999999988888888888999
Q ss_pred HHHHhHhccccchHHHHHHhhHHHHHHHH-HHHhccCcch
Q 015377 80 AALAWIVMPILTWRWLLALSAIPAFVLLI-FIVFMPESPR 118 (408)
Q Consensus 80 ~~l~~~~~~~~~Wr~~f~i~~i~~~~~~~-~~~~lpESp~ 118 (408)
+.++..+.++.+||+.|++.++..++..+ .++..||+++
T Consensus 154 ~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (406)
T PRK15402 154 PLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAG 193 (406)
T ss_pred HHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCc
Confidence 98888777778999999988877665544 4455677643
No 56
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.85 E-value=1.6e-18 Score=170.36 Aligned_cols=333 Identities=12% Similarity=0.066 Sum_probs=184.9
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcc-hhhhHHHhhh-cCCCcchhHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEF-VPPSNRGKWMVVFSTFWTFGSVS 78 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~-~p~~~Rg~~~~~~~~~~~~G~~l 78 (408)
|.|||+.++.+.+++.++++++++++|++.++++|+++|+|.|.. +.....+.+. .|+++|++..+++.....+|..+
T Consensus 67 ~~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~ 146 (495)
T PRK14995 67 RIGFKRLLMLGGTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAF 146 (495)
T ss_pred HhccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 579999999999999999999999999999999999999988764 3344445454 57899999999999999999999
Q ss_pred HHHHHhHhccccchHHHHHHhhHHHHHH-HHHHHhccCcchhHhhcCChhhHHHHHHH------HHHHcCCCCCCCCccC
Q 015377 79 EAALAWIVMPILTWRWLLALSAIPAFVL-LIFIVFMPESPRYLCTKGRITDAHNILDK------IAQFNQTSLPSGNLTS 151 (408)
Q Consensus 79 ~~~l~~~~~~~~~Wr~~f~i~~i~~~~~-~~~~~~lpESp~~l~~~~~~~~a~~~l~~------~~~~~~~~~~~~~~~~ 151 (408)
+|.++..+.++.+|||.|++.....++. .+..+++||+|+.. +++.|.....+.. ........ ...
T Consensus 147 gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~--~~~~d~~g~~~~~~~~~~l~~~~~~~~--~~~--- 219 (495)
T PRK14995 147 GPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRR--DQPLNLGHALMLIVAILLLVYSAKTAL--KGF--- 219 (495)
T ss_pred HHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCC--CCCCChHhHHHHHHHHHHHHHHHHhcc--ccC---
Confidence 9999999989999999999886655544 34556778876421 1122211111000 00000000 000
Q ss_pred CCCCCcccccCC-CCCccccccccccccccccccchhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCC
Q 015377 152 DGTNDLDEEFST-SEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKC 230 (408)
Q Consensus 152 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 230 (408)
.......... .... ........+...+++......+.++..+. . ....+.....+++...+.|...+..
T Consensus 220 --~~~~~~~~~~~~~~~-~l~~f~~~e~~~~~p~~~~~lf~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~lq~v--- 289 (495)
T PRK14995 220 --LSLWVTSLTLLTGAL-LLGLFIRTQLAASRPMIDMRLFTHRIILS-G---VVMAMTAMITLVGFELLMAQELQFV--- 289 (495)
T ss_pred --CchHHHHHHHHHHHH-HHHHHHHHHhcCCCCCcCHHHhCCcccHH-H---HHHHHHHHHHHHHHHHHHHHHHHHH---
Confidence 0000000000 0000 00000000000111111222222222221 1 1222222233333333333221100
Q ss_pred CcccccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh---hhhHHHHHHHHHHH
Q 015377 231 SSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL---QSNILLTALLSGAR 307 (408)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 307 (408)
.+.+............+...++..+.|++.||+|||+.+..+..+..+....+... .+............
T Consensus 290 -------~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G 362 (495)
T PRK14995 290 -------HGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLG 362 (495)
T ss_pred -------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHH
Confidence 00111112222333446667888999999999999998877665554433322221 11111111222222
Q ss_pred HHhhhhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhh
Q 015377 308 MFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVT 357 (408)
Q Consensus 308 ~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~ 357 (408)
+......+.......+..|.+.++.+.++.+....+|+.+++.+.+.+.+
T Consensus 363 ~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 363 FSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222234455566788999999999999999999998888877766543
No 57
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.85 E-value=8.1e-18 Score=161.23 Aligned_cols=313 Identities=15% Similarity=0.140 Sum_probs=179.6
Q ss_pred CCcchhHHHHHHHHHHHHHHHH---hh-hhhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLS---AF-SPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFG 75 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~---~~-~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G 75 (408)
|.|||+.+..+.++..++.++. +. .+++..+++.|++.|++.+.. +....++.|..|+++||+.+++.+....+|
T Consensus 74 r~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 153 (402)
T TIGR00897 74 IIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIG 153 (402)
T ss_pred HcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 5799999999999998887654 23 358889999999999987754 344556789999999999999999999999
Q ss_pred H-HHHHHHHhHhccccchHHHHHHhhHHHHHH-HHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCC
Q 015377 76 S-VSEAALAWIVMPILTWRWLLALSAIPAFVL-LIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDG 153 (408)
Q Consensus 76 ~-~l~~~l~~~~~~~~~Wr~~f~i~~i~~~~~-~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~ 153 (408)
. ++++.++..+.+..+|+..++.......+. .+..+..+|.|+ .+.+
T Consensus 154 ~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---------------------------- 202 (402)
T TIGR00897 154 IGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSNKDIFT---PQHM---------------------------- 202 (402)
T ss_pred HHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhccCCCCC---cccc----------------------------
Confidence 6 578887766666778665544332222221 222333333211 0000
Q ss_pred CCCcccccCCCCCccccccccccccccccccchhhhcc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCc
Q 015377 154 TNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSS 232 (408)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 232 (408)
++ .++. ++. + +..+..+ +++.+ ......+.+...+++...+.|......+
T Consensus 203 ----~~----~~~~---~~~-------~---~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~p~~~~~~g---- 253 (402)
T TIGR00897 203 ----QT----REKF---SEL-------G---KAATILFTNPNVL----LGGMVRIINTIGLFGFAVFLPMFVAELG---- 253 (402)
T ss_pred ----cC----Ccch---hhH-------H---HHHHHHHcChhHH----HHHHHHHHHHHHHHHHHHHHHHHHHHcC----
Confidence 00 0000 000 0 0011111 22222 2222333344455555555554432111
Q ss_pred ccccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHH-HHHHHHHHHHHHH---h--hhhhHHHHHHHHHH
Q 015377 233 SILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTI-MFIFVCIFLLPLV---T--LQSNILLTALLSGA 306 (408)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~-~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~ 306 (408)
.+............++.+++.++.++++||+|||+.... +.....+....+. . .++...........
T Consensus 254 -------~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 326 (402)
T TIGR00897 254 -------FSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIAL 326 (402)
T ss_pred -------CChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHH
Confidence 111111122233456778899999999999998876532 2222222111111 1 11111111111111
Q ss_pred HHHhhhhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhc
Q 015377 307 RMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLI 382 (408)
Q Consensus 307 ~~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 382 (408)
.++..+..+ .....+|..| +.|+++.|+.+....+++.++|.+.+.+.+..+....+.+.+++.+++.+...|.
T Consensus 327 G~~~~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 327 GIFLAGYVP-LAAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred HHHHHHHHH-HHHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHh
Confidence 222112222 2344567766 4799999999999999999999999988887776667777777777776666654
No 58
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.84 E-value=1.1e-19 Score=174.54 Aligned_cols=334 Identities=17% Similarity=0.233 Sum_probs=192.0
Q ss_pred chhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHH
Q 015377 4 GRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAAL 82 (408)
Q Consensus 4 Rr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l 82 (408)
-.+.+....+.+++.++++++.+|++.+++.|++.|+..++. +....+++-|+.++|||++++++.....+|.+.++++
T Consensus 110 ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggli 189 (495)
T KOG2533|consen 110 LSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLI 189 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHH
Confidence 356777888889999989999999999999999999999887 4556678999999999999999999999999999999
Q ss_pred HhHh------ccccchHHHHHHhhHHHHHH-HHHHHhccCcch--hHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCC
Q 015377 83 AWIV------MPILTWRWLLALSAIPAFVL-LIFIVFMPESPR--YLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDG 153 (408)
Q Consensus 83 ~~~~------~~~~~Wr~~f~i~~i~~~~~-~~~~~~lpESp~--~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~ 153 (408)
++.+ ....||||+|++.++..++. ++.++++|++|. |...+++.+ -..++.++.+.++
T Consensus 190 A~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~---~~~~~~~~~~~~~---------- 256 (495)
T KOG2533|consen 190 AYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKE---LVVERLRESPSGG---------- 256 (495)
T ss_pred HHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChhhccccchHHHH---HHHHHHHhccCCC----------
Confidence 9985 33569999999999887776 456788999998 332221111 1111211110000
Q ss_pred CCCcccccCCCCCccccccccccccccccccchhhh-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCc
Q 015377 154 TNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLM-LFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSS 232 (408)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 232 (408)
.++ +.++.++++ +..++.| ...+.+++....-|+...|.|.+..+..
T Consensus 257 ---~~~---------------------~~~~~~~~~a~~dp~vw----~~~l~~~~~~lv~~~~~~~lpl~l~~~~---- 304 (495)
T KOG2533|consen 257 ---IEN---------------------KFKWKGFKEALKDPGVW----PFSLCYFFLKLVNYGFSYWLPLYLKSNG---- 304 (495)
T ss_pred ---ccc---------------------ccCHHHHHHHHhchhHH----HHHHHHHHHhhccccHHHHHHHHHHcCC----
Confidence 000 001112222 2233333 2334444455555556666665543200
Q ss_pred ccccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhh----hchHHHHHHHHHHHHHHH-HHHHhhhhhHHHHHHHHHHH
Q 015377 233 SILLSENVQDASVYINVFITSFAELPGLLTAALLVDR----VGRKLSMTIMFIFVCIFL-LPLVTLQSNILLTALLSGAR 307 (408)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr----~grR~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 307 (408)
...............++++++.+++++++|| ..+|........+..... ..+...............+.
T Consensus 305 ------~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~ 378 (495)
T KOG2533|consen 305 ------GYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLAAAVLPGAYGAFLIGP 378 (495)
T ss_pred ------CcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHhHHHHhcc
Confidence 0001111122334467788999999999999 556665554433333222 22222221222211122222
Q ss_pred HHhhhhhhhhhhhcccccCCchhhHHHhHHHHh-hhHhHhhHHHHHHHHhhhc-chhhHH-HHHHHHHHHHHHHHHhccc
Q 015377 308 MFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAV-GRIGGMVCPLVAVGLVTSC-HQTAAI-LLLEALIVLSVVVILLIPF 384 (408)
Q Consensus 308 ~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~-~~~~~~~~p~~~~~l~~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~ 384 (408)
+...........+.++......|..+...++.. ...+++++|.+........ .....+ .+.+.+..+..+++.++..
T Consensus 379 ~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~~~~~~~~~~~~~v~~~~~ 458 (495)
T KOG2533|consen 379 YGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPRYGWGAVFYMLVAACVGIVLLLVILFYK 458 (495)
T ss_pred hhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 222233455566667777666665555555554 4467777777664433321 222333 3444333333333333333
Q ss_pred ccCC
Q 015377 385 ETKG 388 (408)
Q Consensus 385 et~~ 388 (408)
|.++
T Consensus 459 ~~~n 462 (495)
T KOG2533|consen 459 EREN 462 (495)
T ss_pred HHHH
Confidence 4443
No 59
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.84 E-value=5.7e-18 Score=160.88 Aligned_cols=117 Identities=19% Similarity=0.303 Sum_probs=101.0
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 79 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 79 (408)
|.|||+.+..+.++..++.++..+++++..+++.|++.|++.+.. +....++.|+.|+++|++.+++.+....+|..++
T Consensus 52 ~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 131 (377)
T PRK11102 52 SFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLA 131 (377)
T ss_pred hcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 579999999999999999999999999999999999999988765 3456688999999999999999999999999999
Q ss_pred HHHHhHhccccchHHHHHHhhHHHHHH-HHHHHhccCcc
Q 015377 80 AALAWIVMPILTWRWLLALSAIPAFVL-LIFIVFMPESP 117 (408)
Q Consensus 80 ~~l~~~~~~~~~Wr~~f~i~~i~~~~~-~~~~~~lpESp 117 (408)
+.++..+.+..+||+.|++.++..++. .+..+++||++
T Consensus 132 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (377)
T PRK11102 132 PIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPETL 170 (377)
T ss_pred HHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 999887777789999999888776655 34456677754
No 60
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.84 E-value=4.3e-18 Score=162.46 Aligned_cols=319 Identities=12% Similarity=0.041 Sum_probs=187.1
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 79 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 79 (408)
|.|||++++.+.+++.+++++++++++. ++.|+++|++.|.. ++..+++.|++|+++|+++.+..+....+|.+++
T Consensus 64 r~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~G 140 (393)
T PRK11195 64 SFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLG 140 (393)
T ss_pred ccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 6899999999999999888887777664 78999999998875 5667789999999999999999999999999999
Q ss_pred HHHHhHhccccchHHHHHHhhHHHHHHHHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCCCCccc
Q 015377 80 AALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDE 159 (408)
Q Consensus 80 ~~l~~~~~~~~~Wr~~f~i~~i~~~~~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (408)
|.++..+.+. .|+..+.+.+...++..+..+.+||+|+... ++.++..+.++...
T Consensus 141 p~lgG~l~~~-~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~---------------------- 195 (393)
T PRK11195 141 TVLGGALADP-HAEAALAVCALIYLLAALFNLFIPRLGARRP--GQSWNPIALLRDFF---------------------- 195 (393)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCccccc--ccCCCHHHHHHHHH----------------------
Confidence 9998887653 4888877766555444555667888764210 00000000000000
Q ss_pred ccCCCCCccccccccccccccccccchhhhccchhhHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccccc
Q 015377 160 EFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTIL-LWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSE 238 (408)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 238 (408)
...+.+++.+..+.... ....+.......+....|.+...+
T Consensus 196 -------------------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg------------- 237 (393)
T PRK11195 196 -------------------------HACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALG------------- 237 (393)
T ss_pred -------------------------HHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-------------
Confidence 00111222222222221 122222222222333233332211
Q ss_pred CccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhh
Q 015377 239 NVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIAN 318 (408)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (408)
.+............++.++|.++.+++.||.++|+.+..+..+. .....+....+.+..........++.....+...
T Consensus 238 -~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~~~~ 315 (393)
T PRK11195 238 -ITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGILMG-LVVLLMALQHSLLPAYPLLILIGALGGFFVVPMN 315 (393)
T ss_pred -CChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHHHH-HHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhHH
Confidence 11112223334455677888899999999988887776654332 2222222222222222222122222111123334
Q ss_pred hhcccccCCch-hhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCC
Q 015377 319 IFAPEIYPTSM-RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKG 388 (408)
Q Consensus 319 ~~~~el~p~~~-R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~ 388 (408)
....|..|.+. ++++.++.+....++..++..+...+ +..+-...+.+.++..+++....+.+....++
T Consensus 316 ~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (393)
T PRK11195 316 ALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVPVVAVIVGFGLLVALAMALLWRWHRRN 385 (393)
T ss_pred HHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 44567766665 79999999999999888887776644 44555555566565556666666666544333
No 61
>PRK11043 putative transporter; Provisional
Probab=99.84 E-value=9.1e-18 Score=160.91 Aligned_cols=284 Identities=11% Similarity=0.153 Sum_probs=171.6
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcch-hhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 79 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 79 (408)
|.|||+.+..+..+..++.++.++++++..+++.|+++|++.+... ....++.|+.|+++|++..+..+....+|..++
T Consensus 67 r~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 146 (401)
T PRK11043 67 RYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALA 146 (401)
T ss_pred hcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHH
Confidence 5799999999999999999999999999999999999999887643 344577899999999999888888888899999
Q ss_pred HHHHhHhccccchHHHHHHhhHHHHHHHHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCCCCccc
Q 015377 80 AALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDE 159 (408)
Q Consensus 80 ~~l~~~~~~~~~Wr~~f~i~~i~~~~~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (408)
+.++..+.+..+||+.|++.++..++..+..++++|+++. ++.++.+
T Consensus 147 ~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~----------------------------- 193 (401)
T PRK11043 147 PLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKPSKKA----RKQSQDA----------------------------- 193 (401)
T ss_pred HHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCCCCc----cccchHH-----------------------------
Confidence 9988888788899999999888777665555556665420 0000000
Q ss_pred ccCCCCCccccccccccccccccccchhhhc-cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccccc
Q 015377 160 EFSTSEETPLLSSARKRTTVRKSGFSSFLML-FSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSE 238 (408)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 238 (408)
..++.. .+++.+..... .......++....+.|.+....+
T Consensus 194 -------------------------~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~p~~~~~~g---------- 234 (401)
T PRK11043 194 -------------------------LTFKQLLKSKTYLGNVLI----FAACSAAFFAWLTGSPFILEQMG---------- 234 (401)
T ss_pred -------------------------HHHHHHHcChhHHHHHHH----HHHHHHHHHHHHHHhHHHHHHcC----------
Confidence 001111 12222221111 11111222222223333221110
Q ss_pred CccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH---HHh-hhhhHH-HHHHHHHHHHHhhhh
Q 015377 239 NVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLP---LVT-LQSNIL-LTALLSGARMFSMGT 313 (408)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~---~~~-~~~~~~-~~~~~~~~~~~~~~~ 313 (408)
.+............+..++|.++.+++.||+++|+..........+.... ... ..+... .........+.....
T Consensus 235 -~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (401)
T PRK11043 235 -YSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAI 313 (401)
T ss_pred -CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHH
Confidence 11111112222334566778888999999999988664433332222111 111 111111 111111111222233
Q ss_pred hhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhh
Q 015377 314 FIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS 358 (408)
Q Consensus 314 ~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~ 358 (408)
++.......|..|. .|+++.|+.+.++..++..++.+.+.+.+.
T Consensus 314 ~~~~~~~~~~~~~~-~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~ 357 (401)
T PRK11043 314 YPIVVAQALRPFPQ-ATGKAAALQNTLQLGLCFLASLLVSALIST 357 (401)
T ss_pred HHHHHHHHhhhCcc-cChHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 34445555677774 699999999999888888888888777653
No 62
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.84 E-value=6.7e-19 Score=171.18 Aligned_cols=328 Identities=12% Similarity=0.071 Sum_probs=181.8
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLI-LRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVS 78 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l 78 (408)
|.|||+.++++.++..++.++++++++++.+++ .|++.|++.|.. .....++.|+.| ++|++..++.+.+..+|..+
T Consensus 80 r~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~ 158 (455)
T TIGR00892 80 RFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLST 158 (455)
T ss_pred HcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHH
Confidence 579999999999999999999999999998875 579999998864 344556778886 78999999999999999999
Q ss_pred HHHHHhHhccccchHHHHHHhhHHHHHHHHHHHh-ccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCCCCc
Q 015377 79 EAALAWIVMPILTWRWLLALSAIPAFVLLIFIVF-MPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDL 157 (408)
Q Consensus 79 ~~~l~~~~~~~~~Wr~~f~i~~i~~~~~~~~~~~-lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 157 (408)
++++...+.+..+||+.|++.++..++..+..++ .|+.+..- +.+. +.+ ++. + .+ .
T Consensus 159 ~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~--~~~~-~~~---------~~~--~-----~~----~ 215 (455)
T TIGR00892 159 LAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRPVGPSQR--VSKS-KSK---------EGL--P-----PD----G 215 (455)
T ss_pred HHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCCCCcccc--cccc-ccc---------ccC--C-----CC----C
Confidence 9988887777889999999998876654433333 33322100 0000 000 000 0 00 0
Q ss_pred ccccCCCCCccccccccccccccccccchhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccc
Q 015377 158 DEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLS 237 (408)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 237 (408)
.. ++.+.. ...+. ..+...+..+.+++++. .....+...+.++....+.+....+.
T Consensus 216 ~~--~~~~~~-------~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~l~~~~~~~---------- 271 (455)
T TIGR00892 216 ST--KKLSKK-------STAEK-INRFLDFSLFTHRGFLV----YLSGNVIMFLGFFAPIIFLVPYAKDK---------- 271 (455)
T ss_pred cc--cccccc-------chhhh-hhhhcchHHhcCchHHH----HHHHHHHHHHHccchHHHHHHHHHHc----------
Confidence 00 000000 00000 00000111122222221 11112222223333333333222111
Q ss_pred cCccchhHHHHHHHHHhhhhHHHHHHHHHHhhh--chHHHHHH--HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhh
Q 015377 238 ENVQDASVYINVFITSFAELPGLLTAALLVDRV--GRKLSMTI--MFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGT 313 (408)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~--grR~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (408)
............+.++..+++.+++++++||. ++|+.... +.+..++..+......+............+.....
T Consensus 272 -g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~ 350 (455)
T TIGR00892 272 -GVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSV 350 (455)
T ss_pred -CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchH
Confidence 01111222233344566777888899999973 33433322 22222222222222222222222222222222233
Q ss_pred hhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcc-hhhHHHHHHHHHHHHHH
Q 015377 314 FIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH-QTAAILLLEALIVLSVV 377 (408)
Q Consensus 314 ~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~-~~~~~~~~~~~~~i~~~ 377 (408)
.+..+.+..|.+|.+.|+++.|+.+....+|++++|.+.+.+.+..+ ....+.+.+++.+++.+
T Consensus 351 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 351 GALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 45567778899999999999999999999999999999887776553 33455555555444444
No 63
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.84 E-value=4.5e-19 Score=169.98 Aligned_cols=327 Identities=19% Similarity=0.288 Sum_probs=205.5
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhh--hhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFS--PNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSV 77 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~ 77 (408)
|+|-|+++..+.++.++.++++=++ .++..+++.|+++|++.|.. ++.....+.|+|++||++..++...+..+|.+
T Consensus 99 k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v 178 (466)
T KOG2532|consen 99 KFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTI 178 (466)
T ss_pred HcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHH
Confidence 5799999999999999999988555 44557899999999999986 45566788999999999999999999999999
Q ss_pred HHHHHHhHhccc-cchHHHHHHhhHHHHHHHHH-HHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCCC
Q 015377 78 SEAALAWIVMPI-LTWRWLLALSAIPAFVLLIF-IVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTN 155 (408)
Q Consensus 78 l~~~l~~~~~~~-~~Wr~~f~i~~i~~~~~~~~-~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 155 (408)
++-+++..+-+. .||++.|++.++.+++..+. +++..|+|+- +.+..+.| ++++.+....+
T Consensus 179 ~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~---h~~is~~E--l~~I~~~k~~~------------ 241 (466)
T KOG2532|consen 179 ITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSK---HPNISEKE--LKYIEKGKSEA------------ 241 (466)
T ss_pred HHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCccc---CCCCCHHH--HHHHHhccccc------------
Confidence 999888887766 89999999999988887554 4566788862 22222222 22222110000
Q ss_pred CcccccCCCCCccccccccccccccccccchhhhcc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccc
Q 015377 156 DLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSI 234 (408)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 234 (408)
+ .++..+ ..++.++ +++.| ..|+..++....++.+..+.|....+.
T Consensus 242 ---------~----------~~~~~~---vP~~~i~ts~~vw----ai~~~~f~~~~~~~~l~~y~PtY~~~V------- 288 (466)
T KOG2532|consen 242 ---------H----------VKKKPP---VPYKAILTSPPVW----AIWISAFGGNWGFYLLLTYLPTYLKEV------- 288 (466)
T ss_pred ---------c----------cCCCCC---CCHHHHHcCHHHH----HHHHHHHHHHHHHHHHHHHhhHHHHHH-------
Confidence 0 000001 1223333 23322 345555666666666666665443211
Q ss_pred ccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchH--------HHH-HHHHHHHHHHHHHHHhhhh-hH-HHHHHH
Q 015377 235 LLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRK--------LSM-TIMFIFVCIFLLPLVTLQS-NI-LLTALL 303 (408)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR--------~~~-~~~~~~~~~~~~~~~~~~~-~~-~~~~~~ 303 (408)
.+.+.........+..+...+..+++|.++||+.+| +.+ .++....+++++.+.+... .. ..+.++
T Consensus 289 ---L~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l 365 (466)
T KOG2532|consen 289 ---LGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILL 365 (466)
T ss_pred ---hCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHH
Confidence 111122223445566677788889999999998553 222 3344444555555544332 22 232222
Q ss_pred HHHHHHhhhhhhhhhhhccccc-CCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhh---cchhhHHHHHHHHHHHHHHHH
Q 015377 304 SGARMFSMGTFIIANIFAPEIY-PTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS---CHQTAAILLLEALIVLSVVVI 379 (408)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~el~-p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~---~~~~~~~~~~~~~~~i~~~~~ 379 (408)
... ....+. .....+..-.- -++.-+...|+++.++.+.++++|.+.+.+... ..+...|++.+++.+++.++.
T Consensus 366 ~~~-~~~~g~-~~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f 443 (466)
T KOG2532|consen 366 TIA-IGLSGF-NISGFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIF 443 (466)
T ss_pred HHH-HHHccc-chhhhHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchhe
Confidence 222 222232 33333333333 567789999999999999999999999877631 123455667777777776554
Q ss_pred Hhc
Q 015377 380 LLI 382 (408)
Q Consensus 380 ~~~ 382 (408)
.++
T Consensus 444 ~~f 446 (466)
T KOG2532|consen 444 LFF 446 (466)
T ss_pred eEe
Confidence 444
No 64
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.84 E-value=1.5e-18 Score=158.27 Aligned_cols=311 Identities=20% Similarity=0.193 Sum_probs=202.7
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHH---HHHHHHHHhhccCCcchhhhHHHhhhcCCCcchhHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYI---SLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSV 77 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~---~l~~~R~l~Gi~~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~ 77 (408)
|+|.|+...++.++..+-.+..+++.+++ ++++.+++.|++-|...+..++.++++||+++|.+++++. .-++|..
T Consensus 75 rfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~a 153 (417)
T COG2223 75 RFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVA 153 (417)
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcccceehcccccccccCChhhhhHHHHHhc-cccccHH
Confidence 57999999999999999999999887666 9999999999998877777888999999999999999998 7777887
Q ss_pred HHHHHHhHhccccc---hHHHHHHhhHHHHHH-HHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCC
Q 015377 78 SEAALAWIVMPILT---WRWLLALSAIPAFVL-LIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDG 153 (408)
Q Consensus 78 l~~~l~~~~~~~~~---Wr~~f~i~~i~~~~~-~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~ 153 (408)
+...++-.+....+ ||....+-.++.++. +..++.+.|.|+...+++...+
T Consensus 154 v~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~~------------------------- 208 (417)
T COG2223 154 VAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQLP------------------------- 208 (417)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccch-------------------------
Confidence 77776666555556 999888877776664 4556667666653100000000
Q ss_pred CCCcccccCCCCCccccccccccccccccccchhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcc
Q 015377 154 TNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSS 233 (408)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 233 (408)
.+++..++ .++++.+...|+...-.+-++..+.|.+..++-
T Consensus 209 -------------------------------~~~~~v~~---~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~f----- 249 (417)
T COG2223 209 -------------------------------AQLKAVFS---NKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQF----- 249 (417)
T ss_pred -------------------------------hHHHHHhc---CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----
Confidence 01111111 122334555555555555566666665543210
Q ss_pred cccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhh-------hhHHHHHHHHHH
Q 015377 234 ILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ-------SNILLTALLSGA 306 (408)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 306 (408)
..+..+. ....+...+.+...-.++|+++||+|.|+.+.......+++........ +........+..
T Consensus 250 ---g~~~~~A--g~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l 324 (417)
T COG2223 250 ---GLSPVTA--GLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLAL 324 (417)
T ss_pred ---CCChhhH--HHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHH
Confidence 0111111 1233344455566678899999999888877665555555444333221 112222222222
Q ss_pred HHHhhhhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcc-hhhHHHHHHHHHHHHHHHHHhc
Q 015377 307 RMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH-QTAAILLLEALIVLSVVVILLI 382 (408)
Q Consensus 307 ~~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~-~~~~~~~~~~~~~i~~~~~~~~ 382 (408)
..+....+...+-..+.+||.+ -+...|+..++|.+|++.-|...+...+.++ ....+.++..+.+++.+.....
T Consensus 325 ~~~~G~GnGsvfk~Ip~if~~~-~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~ 400 (417)
T COG2223 325 FVFAGLGNGSVFKMIPVIFPKE-TGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWAL 400 (417)
T ss_pred HHHhccCcchheeechHHHHhh-hhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 2333334456778888889874 6888999999999999999999988877776 3456666666666666654444
No 65
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.82 E-value=1.4e-17 Score=180.22 Aligned_cols=323 Identities=14% Similarity=0.018 Sum_probs=182.5
Q ss_pred CCcchhHHHHHHHHHHHHHHHH---hhhhhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLS---AFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGS 76 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~ 76 (408)
|.|||++++.+.++..++.++. ..+++++.++++|+++|++.|.. ++...++.|++|+++|++++++.+.+..+|.
T Consensus 73 r~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~ 152 (1146)
T PRK08633 73 KFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAI 152 (1146)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHH
Confidence 5799999999887766555443 44578999999999999998875 4556789999999999999999999999999
Q ss_pred HHHHHHHhHhccc---------cchHHHHHHhhHH-HHHHHHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCC
Q 015377 77 VSEAALAWIVMPI---------LTWRWLLALSAIP-AFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPS 146 (408)
Q Consensus 77 ~l~~~l~~~~~~~---------~~Wr~~f~i~~i~-~~~~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~ 146 (408)
+++++++..+... .+|++.+.+..+. .++.++..+.+||+|+....++
T Consensus 153 ~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------- 210 (1146)
T PRK08633 153 LAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVF---------------------- 210 (1146)
T ss_pred HHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCcccc----------------------
Confidence 9999998876544 3455555554443 3334455667788875311000
Q ss_pred CCccCCCCCCcccccCCCCCccccccccccccccccccchhhhccchhhHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhc
Q 015377 147 GNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTIL-LWVLYFGNSFVYYGIVLLASELSG 225 (408)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~ 225 (408)
++. +... . +.....++.+++.+......+ ..+.++.... ...+.+....
T Consensus 211 ------------~~~---~~~~-~----------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 260 (1146)
T PRK08633 211 ------------DKK---KYLF-P----------KLLWRNLKLLRSDRVLWLAIIGLSYFWFISQL----AQANFPAYAK 260 (1146)
T ss_pred ------------ccc---cccc-H----------HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH----HHHhhHHHHH
Confidence 000 0000 0 000011222333222222211 1111111111 1111111110
Q ss_pred cCCCCCcccccccCccch-hHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHH
Q 015377 226 SQSKCSSSILLSENVQDA-SVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLS 304 (408)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (408)
.. ...... ..........++.++|.++.+++.||.++|..+.++.+..++.++.+....+........+
T Consensus 261 ~~----------~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (1146)
T PRK08633 261 EV----------LGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFF 330 (1146)
T ss_pred HH----------hCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 00 001111 1222333445677889999999999999888776665554444433333222222222222
Q ss_pred HHHHHhhhhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhh-cchhhHHHHHHHHHHHHHHHHHhcc
Q 015377 305 GARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS-CHQTAAILLLEALIVLSVVVILLIP 383 (408)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~-~~~~~~~~~~~~~~~i~~~~~~~~~ 383 (408)
...++..........+..|..|.+.|+++.|+.+.+..+++++++.+...+... .+....+.+.+.++++..+..+...
T Consensus 331 ~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (1146)
T PRK08633 331 LFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLIGTLYTLLLL 410 (1146)
T ss_pred HHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 222222233345677888999999999999999999998887776665433321 1222334444444444444444433
Q ss_pred cc
Q 015377 384 FE 385 (408)
Q Consensus 384 ~e 385 (408)
|+
T Consensus 411 ~~ 412 (1146)
T PRK08633 411 PD 412 (1146)
T ss_pred HH
Confidence 43
No 66
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.82 E-value=5.6e-17 Score=155.79 Aligned_cols=118 Identities=19% Similarity=0.277 Sum_probs=101.9
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcch-hhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 79 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 79 (408)
|.|||++++.+.+++.++++++++++|++.++++|+++|++.+... ....+..|+.|+++|++.++..+....+|..++
T Consensus 77 r~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 156 (413)
T PRK15403 77 RIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIG 156 (413)
T ss_pred HcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5799999999999999999999999999999999999999887543 345567899999999999999999999999999
Q ss_pred HHHHhHhccccchHHHHHHhhHHHHHHHH-HHHhccCcch
Q 015377 80 AALAWIVMPILTWRWLLALSAIPAFVLLI-FIVFMPESPR 118 (408)
Q Consensus 80 ~~l~~~~~~~~~Wr~~f~i~~i~~~~~~~-~~~~lpESp~ 118 (408)
+.++..+.+..+||+.|++.++..++..+ ..+++||+++
T Consensus 157 ~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~ 196 (413)
T PRK15403 157 PLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVK 196 (413)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 99988887778999999999887766544 3556788753
No 67
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.82 E-value=3.5e-17 Score=155.73 Aligned_cols=301 Identities=16% Similarity=0.117 Sum_probs=174.7
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 79 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 79 (408)
|.|||+.+..+.++..++.++.++++|++.+++.|+++|++.|.. ++...++.|..|+++||+.++.++....+|..++
T Consensus 67 r~g~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 146 (381)
T PRK03633 67 RIGFNRSYYLASLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLG 146 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 469999999999999999999999999999999999999998875 3445566788999999999999999999999999
Q ss_pred HHHHhHhccccchHHHHHHhhHHHHHHHHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCCCCccc
Q 015377 80 AALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDE 159 (408)
Q Consensus 80 ~~l~~~~~~~~~Wr~~f~i~~i~~~~~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (408)
+.+...+.+...|+..+....+...+..+.....+|++. + ++
T Consensus 147 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------~-~~ 188 (381)
T PRK03633 147 QLLVSKVSTELMSVLPWVTGLVLAAILPLLFTRILNQQA-------------------------------------E-NH 188 (381)
T ss_pred HHHHhcccccccchHHHHHHHHHHHHHHHHHhcccCCCC-------------------------------------C-CC
Confidence 998877654433333222211111111111111111100 0 00
Q ss_pred ccCCCCCccccccccccccccccccchhhh-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccccc
Q 015377 160 EFSTSEETPLLSSARKRTTVRKSGFSSFLM-LFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSE 238 (408)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 238 (408)
+.+ +... +.+++.+. .....+.. ...+.....+.|....+.
T Consensus 189 -----~~~------------------~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~lp~~~~~~----------- 230 (381)
T PRK03633 189 -----DST------------------SIWPMLKLRQARL-GVNGCIIS---GIVLGSLYGLMPLYLNHQ----------- 230 (381)
T ss_pred -----CCC------------------CHHHHHHhcchHH-HHHHHHHH---HHHHHHHHHHHHHHHHHc-----------
Confidence 000 0000 11122221 11111111 111111112223222111
Q ss_pred CccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhh
Q 015377 239 NVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIAN 318 (408)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (408)
+.+............+..+++.+..+++.||+|||+.+..+.....+....+. .. .......... ........+...
T Consensus 231 g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~-~~-~~~~~~~~l~-g~~~~~~~p~~~ 307 (381)
T PRK03633 231 GMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML-SQ-AAMAPALFIL-GAAGFTLYPVAM 307 (381)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh-hh-HHHHHHHHHH-HHHHHhHHHHHH
Confidence 01111122223344567788999999999999999988765555444332222 11 1111111111 111123345566
Q ss_pred hhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHH
Q 015377 319 IFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVIL 380 (408)
Q Consensus 319 ~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 380 (408)
.+..|..|.+.++.+.+..+....+|+.++|.+.+.+.+..+....|.+.+.+.++..+..+
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~ 369 (381)
T PRK03633 308 AWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLL 369 (381)
T ss_pred HHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHH
Confidence 66789998887777777777777899999999999888877666667776666665544433
No 68
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.82 E-value=2.8e-18 Score=162.27 Aligned_cols=118 Identities=19% Similarity=0.270 Sum_probs=91.1
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHhhccCCcchhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSP-NYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 79 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~R~l~Gi~~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 79 (408)
|.|||+.++++.++..++.++.++++ ++..+++.|+++|++.+.......+++|+.|+++|++..++......+|..++
T Consensus 63 r~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 142 (366)
T TIGR00886 63 KFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIAGGSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVA 142 (366)
T ss_pred HhCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhchhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHH
Confidence 57999999999999999999999999 99999999999999865444556678999999999999999887777777776
Q ss_pred HHHHhHhcc----------ccchHHHHH-HhhHHH-HHHHHHHHhccCcch
Q 015377 80 AALAWIVMP----------ILTWRWLLA-LSAIPA-FVLLIFIVFMPESPR 118 (408)
Q Consensus 80 ~~l~~~~~~----------~~~Wr~~f~-i~~i~~-~~~~~~~~~lpESp~ 118 (408)
+.++..+.. ..+||+.|+ ..++.. ++..+.....+|+|+
T Consensus 143 ~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (366)
T TIGR00886 143 QFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADTPP 193 (366)
T ss_pred HHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHHHHHHHhcccCCc
Confidence 666544321 348999994 434433 333445556677764
No 69
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.81 E-value=4.5e-17 Score=155.81 Aligned_cols=114 Identities=17% Similarity=0.134 Sum_probs=96.8
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 79 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 79 (408)
|.|||+.+..+.++..++.++.+++++++.+++.|++.|++.+.. +....++.|..|+++|++..++.+....+|..++
T Consensus 72 r~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig 151 (400)
T PRK11646 72 RFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIG 151 (400)
T ss_pred HhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 579999999999999999999999999999999999999987654 4456678899999999999999999999999999
Q ss_pred HHHHhHhccccchHHHHHHhhHHHHHHH-HHHHhccC
Q 015377 80 AALAWIVMPILTWRWLLALSAIPAFVLL-IFIVFMPE 115 (408)
Q Consensus 80 ~~l~~~~~~~~~Wr~~f~i~~i~~~~~~-~~~~~lpE 115 (408)
+.++..+. .++||+.|++.++..++.. +..++.||
T Consensus 152 ~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~ 187 (400)
T PRK11646 152 ALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPA 187 (400)
T ss_pred HHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 99988777 6799999999877655543 33445554
No 70
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.81 E-value=1.6e-17 Score=156.65 Aligned_cols=277 Identities=11% Similarity=0.082 Sum_probs=160.5
Q ss_pred CcchhHH-HHHHHHHHHHHHHHhhh---hhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHH
Q 015377 2 EEGRMSI-LGGALVTFVAGLLSAFS---PNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGS 76 (408)
Q Consensus 2 ~gRr~~~-~~~~~~~~~~~~~~~~~---~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~ 76 (408)
.||||.+ +.+.+..++...+.++. .++..+....++.|++.+.. +....++.|++|+++|++..++...+..+|.
T Consensus 53 ~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~ 132 (356)
T TIGR00901 53 FGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGM 132 (356)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHH
Confidence 5999974 56677777776677777 45555666676777555443 4556688999999999999999999999999
Q ss_pred HHHHHHHhHhccccc--------hHHHHHHhhHHHHHHHHHHH-hccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCC
Q 015377 77 VSEAALAWIVMPILT--------WRWLLALSAIPAFVLLIFIV-FMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSG 147 (408)
Q Consensus 77 ~l~~~l~~~~~~~~~--------Wr~~f~i~~i~~~~~~~~~~-~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~ 147 (408)
++++.++..+.+..+ ||..|++.++..++..+..+ ..||+++.. .+.++..+
T Consensus 133 ~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~~---~~~~~~~~---------------- 193 (356)
T TIGR00901 133 LLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLFLAKEPQEDA---SVPKPLTQ---------------- 193 (356)
T ss_pred HHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHHhccCCCccc---ccchhHHH----------------
Confidence 999999877766666 99999999887766555544 356643210 00000000
Q ss_pred CccCCCCCCcccccCCCCCccccccccccccccccccchhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 015377 148 NLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQ 227 (408)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 227 (408)
+ .+ ..++.+++++..+.........+.....++....+.+....+.
T Consensus 194 ----------------------------~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 239 (356)
T TIGR00901 194 ----------------------------A---VL---KPIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLDM 239 (356)
T ss_pred ----------------------------H---HH---HHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 0 00 0111222222111122222222223333444333333222111
Q ss_pred CCCCcccccccCccchhHH-HHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh--h--------hh
Q 015377 228 SKCSSSILLSENVQDASVY-INVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL--Q--------SN 296 (408)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~--~--------~~ 296 (408)
+.+..... .......+..++|.++++++.||+|||+.+..+.++..+........ . +.
T Consensus 240 -----------g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (356)
T TIGR00901 240 -----------GFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPH 308 (356)
T ss_pred -----------CCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccch
Confidence 01111111 12222335567899999999999999988877666554433322221 1 11
Q ss_pred -HHHHHHHHHHHHHhhhhhhhhhhhcccccCCchhhHHHhHHHHhhh
Q 015377 297 -ILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGR 342 (408)
Q Consensus 297 -~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~ 342 (408)
.......+...+.....++....+..|.+|++.|++..|+.+....
T Consensus 309 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 309 LLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 1111112222233334456778899999999999999999887653
No 71
>PRK10133 L-fucose transporter; Provisional
Probab=99.80 E-value=1.3e-16 Score=154.25 Aligned_cols=300 Identities=14% Similarity=0.062 Sum_probs=170.0
Q ss_pred CCcchhHHHHHHHHHHHHHHHH---hhhhhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLS---AFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGS 76 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~ 76 (408)
|.|||+++..+.+++.++.+++ ++++++..++++|+++|+|.|.. .....++.|+.|+++|++.++..+..+.+|.
T Consensus 87 r~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~ 166 (438)
T PRK10133 87 KLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGA 166 (438)
T ss_pred HhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Confidence 5799999999999999999775 57899999999999999999876 4556677888878877778999999999999
Q ss_pred HHHHHHHhHhc-c-----------------c--------cchHHHHHHh-hHHHHHHHH-HHHhccCcchhHhhcCChhh
Q 015377 77 VSEAALAWIVM-P-----------------I--------LTWRWLLALS-AIPAFVLLI-FIVFMPESPRYLCTKGRITD 128 (408)
Q Consensus 77 ~l~~~l~~~~~-~-----------------~--------~~Wr~~f~i~-~i~~~~~~~-~~~~lpESp~~l~~~~~~~~ 128 (408)
.+++.++..+. . . .+||++|+.. .+..++.++ ....+||.|. ++.
T Consensus 167 ~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~-----~~~-- 239 (438)
T PRK10133 167 IIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQS-----DNH-- 239 (438)
T ss_pred HHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc-----ccc--
Confidence 99988765432 0 0 2566677543 333323222 2333444211 000
Q ss_pred HHHHHHHHHHHcCCCCCCCCccCCCCCCcccccCCCCCccccccccccccccccccchhhhcc-chhhHHHHHHHHHHHH
Q 015377 129 AHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRFFKTTILLWVLYF 207 (408)
Q Consensus 129 a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 207 (408)
++ + ++.. .....+.++ +|+.+...+ ..+.+.
T Consensus 240 -----------------------------~~--~--~~~~--------------~~~~~~~ll~~~~~~~~~l-~~~~~~ 271 (438)
T PRK10133 240 -----------------------------SD--A--KQGS--------------FSASLSRLARIRHWRWAVL-AQFCYV 271 (438)
T ss_pred -----------------------------cc--c--cccc--------------hhhhHHHHHhCchHHHHHH-HHHHHH
Confidence 00 0 0000 000111122 223222221 111111
Q ss_pred HHHHHHHHHHHHHH-hhhccCCCCCcccccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHH
Q 015377 208 GNSFVYYGIVLLAS-ELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIF 286 (408)
Q Consensus 208 ~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~ 286 (408)
...++...|.+ .+..+. ................++.++|.++++++.||+|||+.+..+..+....
T Consensus 272 ---~~~~~~~~~~~~~l~~~~----------~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~ 338 (438)
T PRK10133 272 ---GAQTACWSYLIRYAVEEI----------PGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMAL 338 (438)
T ss_pred ---HHHHHHHHHHHHHHhhhc----------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 11111111222 111100 0111112222334445677889999999999999999887766555443
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcc-hhhHH
Q 015377 287 LLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH-QTAAI 365 (408)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~-~~~~~ 365 (408)
+.......+. .....+....++....++..+....|.+|.+ .+++.++.. ...+|+.+.|.+.+.+.+..+ ....+
T Consensus 339 ~~~~~~~~~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~-~~~as~l~~-~~~~g~~~~~~i~G~l~~~~g~~~~~~ 415 (438)
T PRK10133 339 CLISAFAGGH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQD-TKYGSSFIV-MTIIGGGIVTPVMGFVSDAAGNIPTAE 415 (438)
T ss_pred HHHHHHcCCh-HHHHHHHHHHHHHHHHHHHHHHHHHcccchh-hccchhHHh-HHhccchHHHHHHHHHHHhccchHHHH
Confidence 3332222222 2222223333444455678888888888775 566777765 344677788888887766654 33445
Q ss_pred HHHHHH
Q 015377 366 LLLEAL 371 (408)
Q Consensus 366 ~~~~~~ 371 (408)
++...+
T Consensus 416 ~v~~~~ 421 (438)
T PRK10133 416 LIPALC 421 (438)
T ss_pred HHHHHH
Confidence 443333
No 72
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.80 E-value=4.9e-16 Score=148.96 Aligned_cols=314 Identities=16% Similarity=0.104 Sum_probs=174.2
Q ss_pred cchh-HHHHHHHHHHHHHHHHhhh---hhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHHH
Q 015377 3 EGRM-SILGGALVTFVAGLLSAFS---PNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSV 77 (408)
Q Consensus 3 gRr~-~~~~~~~~~~~~~~~~~~~---~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~ 77 (408)
|||| .+.++.+...++..+.++. .+++.+.+..++.|+..+.. +...++..|+.|+++|++..++...+..+|.+
T Consensus 65 g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i 144 (402)
T PRK11902 65 GRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAML 144 (402)
T ss_pred CcchhHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHH
Confidence 7776 6777777777777666776 35677788877777554443 45567889999999999999999999999999
Q ss_pred HHHHHHhHhccc-cchHHHHHHhhHHHHHHHHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCCCC
Q 015377 78 SEAALAWIVMPI-LTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTND 156 (408)
Q Consensus 78 l~~~l~~~~~~~-~~Wr~~f~i~~i~~~~~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~ 156 (408)
+++.+...+.+. .+||..|++.++..++..+..++.||+++.. ++.++..+
T Consensus 145 ~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~~~~~~e~~~~~---~~~~~~~~------------------------- 196 (402)
T PRK11902 145 VSGGLALWLADRVLGWGNTYLLMAGLMLAGALTTLWAPEPEVPA---RPPRSLGE------------------------- 196 (402)
T ss_pred HHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHhcCCCcccc---cccchhHH-------------------------
Confidence 999888777664 5999999998877666555566778765410 00000000
Q ss_pred cccccCCCCCccccccccccccccccccchhhhccchhhHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015377 157 LDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLY-FGNSFVYYGIVLLASELSGSQSKCSSSIL 235 (408)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 235 (408)
.. + ..++.+++++..+..+.....+ ..... ++.. ..+.+....
T Consensus 197 -----------~~-----------~---~~~~~l~~~~~~~~~l~~~~l~~~~~~~-~~~~--~~~~l~~~~-------- 240 (402)
T PRK11902 197 -----------AV-----------V---GPLRDFFSRRGAWALLLLIVLYKLGDAF-AGSL--STTFLIRGA-------- 240 (402)
T ss_pred -----------HH-----------H---HHHHHHHhCcCHHHHHHHHHHHHhHHHH-HHHH--HHHHHHHhc--------
Confidence 00 0 0111222222222222222221 11111 1111 111111100
Q ss_pred cccCccchhHHHHH-HHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHH---Hhh-hhhHHHHHHHHH----H
Q 015377 236 LSENVQDASVYINV-FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPL---VTL-QSNILLTALLSG----A 306 (408)
Q Consensus 236 ~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~----~ 306 (408)
+.+........ .......++|.++++++.||+|||+.+..+.....+....+ ... .+.......... .
T Consensus 241 ---G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (402)
T PRK11902 241 ---GFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCG 317 (402)
T ss_pred ---CCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Confidence 01111111111 22234578899999999999999887765544433322211 122 222222111111 1
Q ss_pred HHHhhhhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhccccc
Q 015377 307 RMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 386 (408)
Q Consensus 307 ~~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et 386 (408)
.+...........++.+.+|.+.+ ++.+.+..++++..+.+.+.+.+..+....|.+.+.+++++.++....++..
T Consensus 318 g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~~~~~~ 393 (402)
T PRK11902 318 GMGTAAFVALLMALCNRSFSATQY----ALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWLMRGTI 393 (402)
T ss_pred HHHHHHHHHHHHHhcCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 111122234455566777775544 4444444555554555667777777766667777777777777766665443
Q ss_pred C
Q 015377 387 K 387 (408)
Q Consensus 387 ~ 387 (408)
+
T Consensus 394 ~ 394 (402)
T PRK11902 394 G 394 (402)
T ss_pred c
Confidence 3
No 73
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.80 E-value=1.3e-16 Score=152.95 Aligned_cols=285 Identities=15% Similarity=0.124 Sum_probs=176.6
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhh---hhhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAF---SPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGS 76 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~ 76 (408)
|.|||+++..+.++++++.++... .+++..+++.|++.|+|.|.. ....++..|..|+++|++.+++.+.+..+|.
T Consensus 64 r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~ 143 (410)
T TIGR00885 64 KLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGS 143 (410)
T ss_pred HhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHH
Confidence 579999999999999998877543 468999999999999999876 4566788899999999999999999999999
Q ss_pred HHHHHHHhHhcc--------------------------ccchHHHHHHhhHHHHHHHHHHHh--ccCcchhHhhcCChhh
Q 015377 77 VSEAALAWIVMP--------------------------ILTWRWLLALSAIPAFVLLIFIVF--MPESPRYLCTKGRITD 128 (408)
Q Consensus 77 ~l~~~l~~~~~~--------------------------~~~Wr~~f~i~~i~~~~~~~~~~~--lpESp~~l~~~~~~~~ 128 (408)
.+++.+...+.. ..+||++|.+.++..++..+...+ +||.++ ++
T Consensus 144 ~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~--------~~ 215 (410)
T TIGR00885 144 IIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNH--------SD 215 (410)
T ss_pred HHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc--------cc
Confidence 999988765421 136999999887766554333322 333111 00
Q ss_pred HHHHHHHHHHHcCCCCCCCCccCCCCCCcccccCCCCCccccccccccccccccccchhhhcc-chhhHHHHHHHHHHHH
Q 015377 129 AHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRFFKTTILLWVLYF 207 (408)
Q Consensus 129 a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 207 (408)
+++ + +.. ...+..+ +++.+. ..+..+.+.
T Consensus 216 -----------------------------~~~--~-~~~-----------------~~~~~~~~~~~~~~-~~l~~f~yv 245 (410)
T TIGR00885 216 -----------------------------AKQ--I-SFS-----------------ASLSRLARIRHYRE-GVIAQFFYV 245 (410)
T ss_pred -----------------------------ccc--c-cch-----------------hhHHHHHhChhHHH-HHHHHHHHH
Confidence 000 0 000 0000111 122222 222222233
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCcccccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHH
Q 015377 208 GNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFL 287 (408)
Q Consensus 208 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~ 287 (408)
+.....+ .+.+....+... ....+....+.... .....+|.++++++.||+++|+.+..+...+.+.+
T Consensus 246 g~e~~~~---s~l~~y~~~~~~-------~~~~~~a~~~~~~~--~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ 313 (410)
T TIGR00885 246 GVQIMCW---TFIIQYAVRLIP-------GMTAGFAANYNIGA--MVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALC 313 (410)
T ss_pred HHHHHHH---HHHHHHHhhccC-------CCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 2222222 111111110000 00011111122222 24457899999999999999998877766666555
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhh
Q 015377 288 LPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS 358 (408)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~ 358 (408)
+......+... ...+....++....++..+....+..+.+.+..+.++++++ +|+.+.|.+.+.+.|.
T Consensus 314 ll~~~~~~~~~-~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~--~Gga~~p~l~G~~~d~ 381 (410)
T TIGR00885 314 LGSIFAGGHVG-LYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMAI--IGGGIVPPLQGFIIDM 381 (410)
T ss_pred HHHHHcCChHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHH--hccchHHHHHHHHHHH
Confidence 44444333222 22333333444566788899999999998887788888876 8999999999988874
No 74
>PRK10054 putative transporter; Provisional
Probab=99.79 E-value=8.3e-17 Score=153.74 Aligned_cols=308 Identities=12% Similarity=0.090 Sum_probs=178.7
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 79 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 79 (408)
|.|||++++++.+...++.++.+++++++.++++|++.|.+.+.. +....++.|..|+++|++..++.+....+|..++
T Consensus 69 r~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~ig 148 (395)
T PRK10054 69 KFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVG 148 (395)
T ss_pred hcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHH
Confidence 579999999999988888888899999999999999988765543 3456788999999999999999999999999999
Q ss_pred HHHHhHhccccchHHHHHHhhHHHHHHH-HHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCCCCcc
Q 015377 80 AALAWIVMPILTWRWLLALSAIPAFVLL-IFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLD 158 (408)
Q Consensus 80 ~~l~~~~~~~~~Wr~~f~i~~i~~~~~~-~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (408)
+.++..+.. .+||..|++.++..++.. +..+++||+++ +++ ++..
T Consensus 149 p~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~----~~~-~~~~---------------------------- 194 (395)
T PRK10054 149 PPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSEK----AIA-TETG---------------------------- 194 (395)
T ss_pred HHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhcccc----ccc-cchh----------------------------
Confidence 998887654 689999998877666553 33444565432 000 0000
Q ss_pred cccCCCCCccccccccccccccccccchhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccccc
Q 015377 159 EEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSE 238 (408)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 238 (408)
+ + . + ....+.+++.+.-.....+..+...........+.+... + .
T Consensus 195 ~-----~----~-----~---------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~-----------~ 239 (395)
T PRK10054 195 S-----V----W-----S---------PSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVA-D-----------S 239 (395)
T ss_pred h-----h----h-----h---------hhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhc-c-----------c
Confidence 0 0 0 0 000011122211111111111111100001111111110 0 0
Q ss_pred CccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHH-HHHHHHHHHHHhhhhhhhh
Q 015377 239 NVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNIL-LTALLSGARMFSMGTFIIA 317 (408)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 317 (408)
..............+...++.....+.+.||.++|+.+..+.....+....+....++.. ................+..
T Consensus 240 ~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~ 319 (395)
T PRK10054 240 DFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGE 319 (395)
T ss_pred chHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhH
Confidence 011111111222223344455567788999999999887765544443333322222221 1111111222212223455
Q ss_pred hhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHH
Q 015377 318 NIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVV 378 (408)
Q Consensus 318 ~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~ 378 (408)
.....|..|++.|+++.+..+ .+++|..++|.+.+.+.+..+....+.+++.+..+..+.
T Consensus 320 ~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~ 379 (395)
T PRK10054 320 YMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLL 379 (395)
T ss_pred HHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHH
Confidence 667789999999999998654 677899999999998888776544555554444444333
No 75
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.78 E-value=8.6e-16 Score=146.87 Aligned_cols=118 Identities=14% Similarity=0.181 Sum_probs=99.2
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcch-hhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 79 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 79 (408)
|.|||+.+..+..+..++.+...+++++..+++.|++.|++.+... ....+..|..++++|++..+..+.+..+|..++
T Consensus 69 r~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 148 (394)
T PRK11652 69 RVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLA 148 (394)
T ss_pred hcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5799999999999999999999999999999999999999887653 334566789999999999999999999999999
Q ss_pred HHHHhHhccccchHHHHHHhhHHHHHH-HHHHHhccCcch
Q 015377 80 AALAWIVMPILTWRWLLALSAIPAFVL-LIFIVFMPESPR 118 (408)
Q Consensus 80 ~~l~~~~~~~~~Wr~~f~i~~i~~~~~-~~~~~~lpESp~ 118 (408)
+.++..+.+..+||+.|++.++..++. .+..++.||+|+
T Consensus 149 ~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 188 (394)
T PRK11652 149 PLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRP 188 (394)
T ss_pred HHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCc
Confidence 998888777789999999987766554 344566788653
No 76
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.77 E-value=7.7e-16 Score=148.02 Aligned_cols=324 Identities=12% Similarity=0.052 Sum_probs=174.6
Q ss_pred Cc-chhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcc-hhhh----HHHh----hhcCCCcchhHHHHHHHH
Q 015377 2 EE-GRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFF----SWFM----EFVPPSNRGKWMVVFSTF 71 (408)
Q Consensus 2 ~g-Rr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~-~~~~----~~~~----E~~p~~~Rg~~~~~~~~~ 71 (408)
.| ||+.+.++.+...++..+..+.+++..+.+.|++.|++.+.. +... .+.. |......|.+..+
T Consensus 65 ~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G----- 139 (418)
T TIGR00889 65 WLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG----- 139 (418)
T ss_pred hcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh-----
Confidence 44 477888888888888888888999999999999999876543 2221 2332 3333334555444
Q ss_pred HHHHHHHHHHHHhHhccccchHHHHHHhhHHHHHHHHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccC
Q 015377 72 WTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTS 151 (408)
Q Consensus 72 ~~~G~~l~~~l~~~~~~~~~Wr~~f~i~~i~~~~~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~ 151 (408)
.+|.++++.++..+.....|+.. ++.++..++..+..+++||+|+- +++.++
T Consensus 140 -~lG~~ig~~l~g~l~~~~~~~~f-~~~~~~~~~~~~~~~~~~e~~~~---~~~~~~----------------------- 191 (418)
T TIGR00889 140 -TIGFIAAMWAVSLLDIELSNIQL-YITAGSSALLGVFALTLPDIPVA---KSTAKM----------------------- 191 (418)
T ss_pred -hHHHHHHHHHHHHhcccchhHHH-HHHHHHHHHHHHHHhcCCCCCCC---cccccc-----------------------
Confidence 24666666666555334457654 45554444444456678887640 000000
Q ss_pred CCCCCcccccCCCCCccccccccccccccccccchhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 015377 152 DGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCS 231 (408)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 231 (408)
+..+ . . +......+.+++++.-.....+...... .++ .++.+.+.. .+...
T Consensus 192 ----~~~~------~--------~-------~~~~~~~~k~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~-~g~~~ 242 (418)
T TIGR00889 192 ----SIKV------M--------L-------GLDAFILFKNKRMAIFFFFSMLLGAPLQ-ITN--IFGNGFLHE-FGRNP 242 (418)
T ss_pred ----CHHH------H--------h-------hhhHHHHhcCCCeeeHHHHHHHHHhHHH-HHH--HhHHHHHHH-hcccc
Confidence 0000 0 0 0000001111222111111111111111 111 111111110 00000
Q ss_pred cccccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhh-h--HH-HHHHHHHHH
Q 015377 232 SSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQS-N--IL-LTALLSGAR 307 (408)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~-~--~~-~~~~~~~~~ 307 (408)
....+...........+..+.++++.+..++++||+|||+++..+.+..++.......... . .. ......+..
T Consensus 243 ---~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g 319 (418)
T TIGR00889 243 ---EFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYG 319 (418)
T ss_pred ---cccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHH
Confidence 0000000011223334455677888999999999999999998877766554333332111 1 11 111111111
Q ss_pred HHhhhhhhhhhhhcccccCCchhhHHHhHHH-HhhhHhHhhHHHHHHHHhhhcc------hhhHHHHHHHHHHHHHHHHH
Q 015377 308 MFSMGTFIIANIFAPEIYPTSMRSTGAGVAY-AVGRIGGMVCPLVAVGLVTSCH------QTAAILLLEALIVLSVVVIL 380 (408)
Q Consensus 308 ~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~-~~~~~~~~~~p~~~~~l~~~~~------~~~~~~~~~~~~~i~~~~~~ 380 (408)
.......+....+.+|.+|++.|+++.|+.+ ....+|++++|.+.+.+.+..+ +...+.+.+++++++++..+
T Consensus 320 ~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~ 399 (418)
T TIGR00889 320 CAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFM 399 (418)
T ss_pred HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHH
Confidence 1111223455677899999999999999997 4567899999999998887643 34567777777778888888
Q ss_pred hcccccCCcc
Q 015377 381 LIPFETKGKE 390 (408)
Q Consensus 381 ~~~~et~~~~ 390 (408)
++.||+++.-
T Consensus 400 ~~~~~~~~~~ 409 (418)
T TIGR00889 400 IFFKYSHNAI 409 (418)
T ss_pred HHhCCcccCC
Confidence 8888887653
No 77
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.76 E-value=9.6e-19 Score=160.80 Aligned_cols=118 Identities=23% Similarity=0.343 Sum_probs=103.5
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 79 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 79 (408)
|+.||+++..++.+|.++.++++++..|+++.++|.+.|+|.+.. +...+.+++.+|..+|+++++++++..+.|..+|
T Consensus 94 ryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG 173 (493)
T KOG1330|consen 94 RYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLG 173 (493)
T ss_pred hcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhccccccee
Confidence 578999999999999999999999999999999999999999875 5677899999999999999999999999999998
Q ss_pred HHHHhHhccccc-hHHHHHHhhHHHHHHH-HHHHhccCcch
Q 015377 80 AALAWIVMPILT-WRWLLALSAIPAFVLL-IFIVFMPESPR 118 (408)
Q Consensus 80 ~~l~~~~~~~~~-Wr~~f~i~~i~~~~~~-~~~~~lpESp~ 118 (408)
.+.+..+.+..+ |||.|...++.+++.. +.+++.+|.+|
T Consensus 174 ~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~r 214 (493)
T KOG1330|consen 174 YVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPER 214 (493)
T ss_pred EEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCccc
Confidence 887776665444 9999999999888764 45667777544
No 78
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.76 E-value=7.7e-16 Score=145.07 Aligned_cols=285 Identities=18% Similarity=0.171 Sum_probs=165.6
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcch-hhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 79 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 79 (408)
|.|||+.+.++.+...++.++. ..++...+++.|++.|++.|... ....+..|+.| ++|++..+.++.+..+|..++
T Consensus 61 r~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~ 138 (355)
T TIGR00896 61 RFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALA 138 (355)
T ss_pred HhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHH
Confidence 5799999999998888877777 78899999999999999987643 33445678776 689999999999999999999
Q ss_pred HHHHhHhcccc--chHHHHHHhhHHHHHHHHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCCCCc
Q 015377 80 AALAWIVMPIL--TWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDL 157 (408)
Q Consensus 80 ~~l~~~~~~~~--~Wr~~f~i~~i~~~~~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 157 (408)
+.+...+.+.. +||+.|.+.++..++.. ..++||+++ +. + +
T Consensus 139 ~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~--~~~~~~~~~------~~----------------~-~------------ 181 (355)
T TIGR00896 139 AAATVPLAQHSGGHWQQALAWWALPALLAL--LAWIPQVRR------RV----------------A-A------------ 181 (355)
T ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHHHHH--HHHhhhhcc------cc----------------C-C------------
Confidence 88877665443 49999887665543322 233454321 00 0 0
Q ss_pred ccccCCCCCccccccccccccccccccchhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccc
Q 015377 158 DEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLS 237 (408)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 237 (408)
+++ . +.. . ....+.+++.+.. ..........+++...+.|....+.+
T Consensus 182 ~~~-~--~~~---------------~--~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~lp~~~~~~g--------- 228 (355)
T TIGR00896 182 NQT-T--TRL---------------T--PVRIWRSPLAWQV----TVFFGLQSGLYYSLIGWLPAILISHG--------- 228 (355)
T ss_pred CCC-C--CCC---------------C--CchhhcCHhHHHH----HHHHHHHHHHHHHHHHHHHHHHHHcC---------
Confidence 000 0 000 0 0001111222211 11222223344444444443332111
Q ss_pred cCccchhHHHHHHHHHhhhhHHHHHHHHHHhhh-chHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhh
Q 015377 238 ENVQDASVYINVFITSFAELPGLLTAALLVDRV-GRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFII 316 (408)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~-grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (408)
.+............++.+++.++.+++.||+ +||..+..+..+..+....+....+..... ...+..+.....++.
T Consensus 229 --~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~g~~~g~~~~~ 305 (355)
T TIGR00896 229 --ASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WALVLGLGQGGAFPL 305 (355)
T ss_pred --CCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHHHHHhhhhHhHH
Confidence 1111122233344577889999999999999 556555554444433333222222111111 111112222222344
Q ss_pred hhhhcc-cccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcc
Q 015377 317 ANIFAP-EIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH 360 (408)
Q Consensus 317 ~~~~~~-el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~ 360 (408)
...... +..+++.+++..++.+.++.+++.++|.+.+.+.+..+
T Consensus 306 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 306 ALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 344444 44456778999999999999999999999998877655
No 79
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.76 E-value=5.3e-16 Score=167.64 Aligned_cols=293 Identities=9% Similarity=-0.042 Sum_probs=170.0
Q ss_pred CCcchhHHHH---HHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILG---GALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGS 76 (408)
Q Consensus 1 ~~gRr~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~ 76 (408)
|+|||+++.. ..++..+..+.....+|++.++++|+++|++.+.. ++..+++.|++|+++|++++++.+.+..+|.
T Consensus 78 r~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~ 157 (1140)
T PRK06814 78 KYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAI 157 (1140)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHH
Confidence 5799997533 22233333334444589999999999999998865 5667788999999999999999999999999
Q ss_pred HHHHHHHhHhccccchHHHHHHhhHHHHHHHHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCCCC
Q 015377 77 VSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTND 156 (408)
Q Consensus 77 ~l~~~l~~~~~~~~~Wr~~f~i~~i~~~~~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~ 156 (408)
+++++++..+....+||+.|+...+..++.++..+++||++.- +.+.
T Consensus 158 ~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~------------------------------ 204 (1140)
T PRK06814 158 LLGTIIGGLATISGNFVILVALLMGIAVLGWLASLFIPKTGNA---APDL------------------------------ 204 (1140)
T ss_pred HHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhCCCCCCC---CCCC------------------------------
Confidence 9999999998888899999965555555555566667765420 0000
Q ss_pred cccccCCCCCccccccccccccccccccchhhhccc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015377 157 LDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFS-PRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSIL 235 (408)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 235 (408)
.. +.. ..++ ....++...+ +..+...+.....+ +.++....+.|.+....
T Consensus 205 -~~-----~~~-~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~p~~~~~~-------- 255 (1140)
T PRK06814 205 -KI-----DRN-IIRS----------TITLLKYAKADKRIWLAILGISWFW----LVGAVVLSQLPLLAKET-------- 255 (1140)
T ss_pred -ee-----ccc-hHHH----------HHHHHHHHhcCchHHHHHHHHHHHH----HHHHHHHHHhHHHHHHH--------
Confidence 00 000 0000 0001122222 22222111111111 11222222222221100
Q ss_pred cccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh--------------------hh
Q 015377 236 LSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL--------------------QS 295 (408)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~--------------------~~ 295 (408)
.+.............+++.++|.++.++++|+.++++.+..+.++.++..+.+... .+
T Consensus 256 --~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (1140)
T PRK06814 256 --LGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRH 333 (1140)
T ss_pred --cCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccc
Confidence 00111112223344457778899999999988776655444333333222211111 11
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhh
Q 015377 296 NILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVT 357 (408)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~ 357 (408)
.+......+...++..........+..+..|.+.|+++.|+.+.+..++..+++.+.+.+.+
T Consensus 334 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~ 395 (1140)
T PRK06814 334 GWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQA 395 (1140)
T ss_pred cHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12221222222222223334567788999999999999999999999999898888776653
No 80
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.75 E-value=1.6e-15 Score=147.05 Aligned_cols=291 Identities=15% Similarity=0.069 Sum_probs=164.4
Q ss_pred CCcchh-HHHHHHHHHHHHHHHHhhhhh------HHHHHHHHHHhhccCCcch-hhhHHHhhhc-CCCcchhHHHHHHHH
Q 015377 1 MEEGRM-SILGGALVTFVAGLLSAFSPN------YISLLILRGLAGAGLGSGH-VFFSWFMEFV-PPSNRGKWMVVFSTF 71 (408)
Q Consensus 1 ~~gRr~-~~~~~~~~~~~~~~~~~~~~~------~~~l~~~R~l~Gi~~g~~~-~~~~~~~E~~-p~~~Rg~~~~~~~~~ 71 (408)
|.|||| .++.+.....++.++..+.++ ...+++.+++.|++.+... ...++..|.. ++++|++..++.+.+
T Consensus 65 r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~ 144 (437)
T TIGR00792 65 RWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFG 144 (437)
T ss_pred CCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHH
Confidence 468855 566777777777777766654 4567788888888776543 3345667877 568999999998888
Q ss_pred HHHHHHHHHHHHhHhc-------cccchHHHHHHhhHHHHHHHH-HHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCC
Q 015377 72 WTFGSVSEAALAWIVM-------PILTWRWLLALSAIPAFVLLI-FIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTS 143 (408)
Q Consensus 72 ~~~G~~l~~~l~~~~~-------~~~~Wr~~f~i~~i~~~~~~~-~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~ 143 (408)
..+|.++++.+...+. +..+||+++.+.++..++..+ ..+..||.++.. +
T Consensus 145 ~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~------~---------------- 202 (437)
T TIGR00792 145 ATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEI------P---------------- 202 (437)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCC------C----------------
Confidence 8888877665543322 246899999998887766544 345566643200 0
Q ss_pred CCCCCccCCCCCCcccccCCCCCccccccccccccccccccchhhhccc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015377 144 LPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFS-PRFFKTTILLWVLYFGNSFVYYGIVLLASE 222 (408)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (408)
+++ + ++.+. + ..++.+++ ++.+. .. ...+...+.++....+.+.
T Consensus 203 --------------~~~--~-~~~~~-----------~---~~~~~l~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~ 247 (437)
T TIGR00792 203 --------------KNI--E-KKLSL-----------K---QIFKALFKNDQLLI-LC---LAYLFYNLAFNIKNGVQVY 247 (437)
T ss_pred --------------ccc--c-cCCCH-----------H---HHHHHHhCCHHHHH-HH---HHHHHHHHHHHHHcchhhe
Confidence 000 0 00000 0 01222222 22222 11 1111122222221111111
Q ss_pred hhccCCCCCcccccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhh-HHHHH
Q 015377 223 LSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSN-ILLTA 301 (408)
Q Consensus 223 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 301 (408)
.... . .. ..........+..+..+++.++.++++||+|||+.+..+..+..+.........++ .....
T Consensus 248 ~~~~--------~--~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (437)
T TIGR00792 248 YFTY--------V--LG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILV 316 (437)
T ss_pred eEee--------e--cC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHH
Confidence 1100 0 00 01111122234467778899999999999999998877766555443333322222 22222
Q ss_pred HHHHHHHHhhhhhhhhhhhcccccC-------CchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhc
Q 015377 302 LLSGARMFSMGTFIIANIFAPEIYP-------TSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSC 359 (408)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~el~p-------~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~ 359 (408)
......+......+..+.+.+|..| .+.++++.|+.+.+.++++.+++.+.+.+.+..
T Consensus 317 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~ 381 (437)
T TIGR00792 317 LIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGII 381 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 2222222223344667777787765 566799999999999999999999888776643
No 81
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.74 E-value=1.6e-15 Score=146.34 Aligned_cols=135 Identities=12% Similarity=0.085 Sum_probs=88.6
Q ss_pred HHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCchh
Q 015377 251 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 330 (408)
Q Consensus 251 ~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R 330 (408)
+..+..+++.++.++++||+|||+.+..+.++.++.........+........................+.+|.+|++.|
T Consensus 270 ~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~ 349 (420)
T PRK09528 270 FQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLS 349 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccce
Confidence 33456678999999999999999988776665555433333333333222211111111111123345677899999999
Q ss_pred hHHHhH-HHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccc
Q 015377 331 STGAGV-AYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFE 385 (408)
Q Consensus 331 ~~a~gi-~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~e 385 (408)
+++.+. .+..+.+|++++|.+.+.+.+..+....+.+.+++.++..++.++..++
T Consensus 350 a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 350 ATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred eeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 998776 4556778999999999988887776677777777777666666655444
No 82
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.73 E-value=2.2e-14 Score=136.60 Aligned_cols=286 Identities=13% Similarity=0.021 Sum_probs=164.0
Q ss_pred HHhhhhhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHhHhccccchHHHHHHh
Q 015377 21 LSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALS 99 (408)
Q Consensus 21 ~~~~~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~~~~~~Wr~~f~i~ 99 (408)
....+++++.+++.|+++|.+.+.. +....+..|+ +++|++..+......++|.+++++++..+.+..|||+.|++.
T Consensus 87 ~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~ 164 (382)
T TIGR00902 87 FSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAIL 164 (382)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHH
Confidence 4456789999999999999877654 3444454454 578899999999999999999999988888889999999887
Q ss_pred hHHHHHHHHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCCCCcccccCCCCCccccccccccccc
Q 015377 100 AIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTV 179 (408)
Q Consensus 100 ~i~~~~~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (408)
.+...+... .+.++|+++ +++.+ + ++ +.+
T Consensus 165 ~~~~~~~~~-~~~~~~~~~----~~~~~----------------------------~-~~-----~~~------------ 193 (382)
T TIGR00902 165 TAGLAFMLI-GFLIKPTIP----PKDAI----------------------------P-ED-----ESQ------------ 193 (382)
T ss_pred HHHHHHHHH-HHHcCCCCC----CCccc----------------------------c-cc-----ccc------------
Confidence 654333222 333344321 00000 0 00 000
Q ss_pred cccccchhhhc-cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccCccchhHHHHHHHHHhhhhH
Q 015377 180 RKSGFSSFLML-FSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELP 258 (408)
Q Consensus 180 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (408)
..+..... .+|+.+.-.....+.... ...++. +.+....+.+ ...........+..+.+++
T Consensus 194 ---~~~~~~~~l~~~~~~~~l~~~~l~~~~-~~~~~~---~~~~~l~~~g-----------~s~~~~g~l~~~~~~~~i~ 255 (382)
T TIGR00902 194 ---GDSAFIALLKNPMNLRFLAAVCLIQGA-HAAYYG---FSAIYWQAAG-----------ISASATGLLWGIGVLAEII 255 (382)
T ss_pred ---cchhHHHHHcChHHHHHHHHHHHHHHH-HHHHHH---HHHHHHHHCC-----------CCHhHHHHHHHHHHHHHHH
Confidence 00011122 223332222111221111 112221 2221111110 1111122223345677888
Q ss_pred HHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCchhhHHHhHHH
Q 015377 259 GLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAY 338 (408)
Q Consensus 259 g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~ 338 (408)
+..+.+.+.||+|+|+.+..+.....+........++..........-.+......+....+..+. |.+.|+++.++.+
T Consensus 256 ~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~ 334 (382)
T TIGR00902 256 IFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYN 334 (382)
T ss_pred HHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHH
Confidence 899999999999999998887777666554444433322222111111111122234445566677 9999999999976
Q ss_pred Hh-hhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHH
Q 015377 339 AV-GRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVI 379 (408)
Q Consensus 339 ~~-~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~ 379 (408)
.. ..+|..++|.+.+.+.+..+. ..|.+.+.+.+++.+..
T Consensus 335 ~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~~ 375 (382)
T TIGR00902 335 ALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFLI 375 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHH
Confidence 54 457888899999988887653 55777777776665443
No 83
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.72 E-value=8.1e-15 Score=140.26 Aligned_cols=318 Identities=12% Similarity=0.068 Sum_probs=168.1
Q ss_pred CCcchhHHHHHHHHHHHHHHHH---hhh-----hhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLS---AFS-----PNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTF 71 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~---~~~-----~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~ 71 (408)
|.|||+.++.+.....+..... .+. +.+..+++.|++.|++.+.. +....+..|..+ +++...+.....
T Consensus 64 r~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~ 141 (396)
T TIGR00882 64 KLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMF 141 (396)
T ss_pred HhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--hcccccchhhhh
Confidence 5799999988766665433221 112 22345677788888887764 334445555433 334455566666
Q ss_pred HHHHHHHHHHHHhHhccccchHHHHHHhhHHHHHHHHHHH-hccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCcc
Q 015377 72 WTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIV-FMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLT 150 (408)
Q Consensus 72 ~~~G~~l~~~l~~~~~~~~~Wr~~f~i~~i~~~~~~~~~~-~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~ 150 (408)
..+|..+++.++..+.+ .+||++|++.++..++..+..+ ..||+|+. ++..+ +
T Consensus 142 ~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~--------~---------- 195 (396)
T TIGR00882 142 GCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKPKAPSS-------ATVAN--------A---------- 195 (396)
T ss_pred cccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCCCchh-------hhhhc--------c----------
Confidence 67888888887765543 5999999998877666544433 34554321 00000 0
Q ss_pred CCCCCCcccccCCCCCccccccccccccccccccchhhhcc-chhhHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhccCC
Q 015377 151 SDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRFFKTTILLWVLYFGNS-FVYYGIVLLASELSGSQS 228 (408)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~ 228 (408)
.+. +.++. ..++..+++ +++.+.-............ ...+ ...+.......
T Consensus 196 ------~~~---~~~~~---------------~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~-~~~y~~~~~~~-- 248 (396)
T TIGR00882 196 ------LGA---NASAF---------------SLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQ-FANFFTSFFAT-- 248 (396)
T ss_pred ------ccc---ccCCC---------------CHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhccc--
Confidence 000 00000 000111222 2222221111111111110 1011 11111111100
Q ss_pred CCCcccccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Q 015377 229 KCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARM 308 (408)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (408)
.............+..+...++....+++.||+|||+.+..+..+.++.........+.............
T Consensus 249 ---------~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~ 319 (396)
T TIGR00882 249 ---------PQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAF 319 (396)
T ss_pred ---------cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHH
Confidence 00111111222334456677788999999999999998877666555533332333332222221111111
Q ss_pred HhhhhhhhhhhhcccccCCchhhHHHhH-HHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhc
Q 015377 309 FSMGTFIIANIFAPEIYPTSMRSTGAGV-AYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLI 382 (408)
Q Consensus 309 ~~~~~~~~~~~~~~el~p~~~R~~a~gi-~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 382 (408)
...........+..|.+|++.|+++.+. .+....+|++++|.+.+.+.+..+....+.+.+++.++..++..+.
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~ 394 (396)
T TIGR00882 320 EVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISVFT 394 (396)
T ss_pred HHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHh
Confidence 1111112344566788999999998877 4567789999999999998887776778888888877776665543
No 84
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.69 E-value=1e-13 Score=132.02 Aligned_cols=284 Identities=9% Similarity=-0.053 Sum_probs=151.8
Q ss_pred HhhhhhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHhHhccccchHHHHHHhh
Q 015377 22 SAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSA 100 (408)
Q Consensus 22 ~~~~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~~~~~~Wr~~f~i~~ 100 (408)
...+++++.+++.|++.|++.+.. +....+..++ +++|++..+..+...++|..++++++..+.++.+||..|++.+
T Consensus 88 ~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~ 165 (382)
T PRK11128 88 WFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILT 165 (382)
T ss_pred HHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHH
Confidence 345688999999999999876654 3334444454 4567777777888889999999999999888889999998877
Q ss_pred HHHHHHHHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCCCCcccccCCCCCcccccccccccccc
Q 015377 101 IPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVR 180 (408)
Q Consensus 101 i~~~~~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (408)
+..++..+...+.||.++ +++. ++ +..+ .
T Consensus 166 ~~~~~~~~~~~~~~~~~~----~~~~-------------------------------~~--~~~~--------------~ 194 (382)
T PRK11128 166 AGVASMLLGQLLRPTIMP----QGES-------------------------------RQ--QESA--------------G 194 (382)
T ss_pred HHHHHHHHHHHccCCCCC----cccc-------------------------------cc--cccc--------------c
Confidence 644443333334444211 0000 00 0000 0
Q ss_pred ccccchhhhcc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccCccchhHHHHHHHHHhhhhHH
Q 015377 181 KSGFSSFLMLF-SPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPG 259 (408)
Q Consensus 181 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 259 (408)
+ .+++..+ +++.+.-.....+.... +.....+.+....+. +...........+..+..+++
T Consensus 195 ~---~~~~~i~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~-----------g~s~~~~g~~~~~~~~~~~~~ 256 (382)
T PRK11128 195 W---PAWKALLKEPTVWRFLLCVSLLQGS----HAAYYGFSAIYWQAA-----------GYSASTIGYLWSLGVVAEVLI 256 (382)
T ss_pred c---chHHHHHcChhHHHHHHHHHHHHHH----hHhHHHHHHHHHHHC-----------CCCHhHHHHHHHHHHHHHHHH
Confidence 0 0112222 23333222211221111 111111111111111 011111122223445677888
Q ss_pred HHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCchhhHHHhHHHH
Q 015377 260 LLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYA 339 (408)
Q Consensus 260 ~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~ 339 (408)
.++.+++.||.|+|+.+..+.....+........++.+......+...+......+....+..+.. ...+++..++.+.
T Consensus 257 ~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 335 (382)
T PRK11128 257 FAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAARP-GSEVIRLQALYSA 335 (382)
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-HhhhHHHHHHHHH
Confidence 889999999999999987776665554443333333232222222111111112233344455654 4446788888775
Q ss_pred hh-hHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHH
Q 015377 340 VG-RIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVV 378 (408)
Q Consensus 340 ~~-~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~ 378 (408)
.+ .+|..++|.+.+.+.+..+. ..++..+++.+++.++
T Consensus 336 ~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T PRK11128 336 LAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPALFI 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 54 35667889998888887654 3455555555544433
No 85
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.68 E-value=7.7e-15 Score=142.64 Aligned_cols=362 Identities=16% Similarity=0.144 Sum_probs=200.3
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHH-HhhccCCcchhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRG-LAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 79 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~-l~Gi~~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 79 (408)
|+|.|.+.+.+.++..++.+++.|+++++++++.-- +.|+|.|..+.....+.-...+|+|+.++++...+-.+|.++-
T Consensus 107 rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kkR~lA~Gia~~GsG~G~~~~ 186 (509)
T KOG2504|consen 107 RFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKKRALATGIAVSGTGVGTVVF 186 (509)
T ss_pred hcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHHHHHHHhhhhccCCcceeeH
Confidence 579999999999999999999999999988776654 7788988764332222223347899999999999999999998
Q ss_pred HHHHhHhccccchHHHHHHhhHHHHHHHHH-HHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCCCCcc
Q 015377 80 AALAWIVMPILTWRWLLALSAIPAFVLLIF-IVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLD 158 (408)
Q Consensus 80 ~~l~~~~~~~~~Wr~~f~i~~i~~~~~~~~-~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (408)
+.+.-.+.+..|||+.+++.+.+.+-..+. ...-|.+|+-. .+ +++. .++ . ..+.+..+...+.+...+
T Consensus 187 ~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~---~~-~~~~--~~~-~---~~~~~~~~~~~~~~~~~~ 256 (509)
T KOG2504|consen 187 PPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKK---PN-EEKD--LRN-S---AASVESTPKPVELRISER 256 (509)
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCC---ch-hhhh--hcc-c---cccccccccccccccccC
Confidence 888888888999999999887766554443 33445444311 11 1111 111 0 000000000000000000
Q ss_pred cccCCCCCcccccccccccc-ccccccchhhhccchhhHHH--HHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 015377 159 EEFSTSEETPLLSSARKRTT-VRKSGFSSFLMLFSPRFFKT--TILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSIL 235 (408)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 235 (408)
+..............++.++ ...........+++.+..+. .+...+-.....+.++....+.+....+.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~-------- 328 (509)
T KOG2504|consen 257 DSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSL-------- 328 (509)
T ss_pred CCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--------
Confidence 00000000000000000000 00000001111112222222 11112222233344444444444443211
Q ss_pred cccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhc--hHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhh
Q 015377 236 LSENVQDASVYINVFITSFAELPGLLTAALLVDRVG--RKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGT 313 (408)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~g--rR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (408)
............+.++..++|.++.|++.|+.. ++.....+.+++++....+...++......+.....++....
T Consensus 329 ---g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~ 405 (509)
T KOG2504|consen 329 ---GLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSF 405 (509)
T ss_pred ---CCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 112222233334456778899999999999987 344445555555554433333333222222222222222223
Q ss_pred hhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchh-hHHHHHHHHHHHHHHHHHhcc
Q 015377 314 FIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQT-AAILLLEALIVLSVVVILLIP 383 (408)
Q Consensus 314 ~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~-~~~~~~~~~~~i~~~~~~~~~ 383 (408)
......+..|+.+.+.-+.+.|+...+..++..++|.+.+.+.+..+.+ ..+...+++.+++.+..++.+
T Consensus 406 ~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 406 SSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 3445578899999999999999999999999999999988877776643 455666666667766655554
No 86
>PTZ00207 hypothetical protein; Provisional
Probab=99.66 E-value=5.3e-14 Score=138.07 Aligned_cols=133 Identities=16% Similarity=0.110 Sum_probs=100.3
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhh------hhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFS------PNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWT 73 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~ 73 (408)
+.|||+++.++.++++++.++++++ ++++.+.++|++.|+|.+.. ......+.+++| ++||++.++...+..
T Consensus 87 r~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~g 165 (591)
T PTZ00207 87 YLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTG 165 (591)
T ss_pred HhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHH
Confidence 4799999999999999999999987 68999999999999998764 344456778886 789999999999999
Q ss_pred HHHHHHHHHHhHhccccchHHHHHHhhHHHHHH-HHH--HHhccCcchhHhhcCChhhHHHHHHH
Q 015377 74 FGSVSEAALAWIVMPILTWRWLLALSAIPAFVL-LIF--IVFMPESPRYLCTKGRITDAHNILDK 135 (408)
Q Consensus 74 ~G~~l~~~l~~~~~~~~~Wr~~f~i~~i~~~~~-~~~--~~~lpESp~~l~~~~~~~~a~~~l~~ 135 (408)
+|..+.+.+...+.. .+|+..|++.++.+++. ++. ....|++|+|...+++.+++++.+++
T Consensus 166 LGsaI~~~l~~~l~~-~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~ 229 (591)
T PTZ00207 166 LGSAILGSIQLAFFS-DNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRL 229 (591)
T ss_pred HHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHh
Confidence 999864444333222 46888888776655443 332 33457777777677777777766444
No 87
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.65 E-value=2.3e-13 Score=132.84 Aligned_cols=105 Identities=15% Similarity=0.084 Sum_probs=91.4
Q ss_pred CcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCc---chhHHHHHHHHHHHHHH
Q 015377 2 EEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSN---RGKWMVVFSTFWTFGSV 77 (408)
Q Consensus 2 ~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~---Rg~~~~~~~~~~~~G~~ 77 (408)
.|||+++.++.++..++.++.++++++..+.++|++.|+|.|.. +...++.+|.+|+++ |+...++++.+.++|.+
T Consensus 76 ~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ 155 (475)
T TIGR00924 76 WGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSF 155 (475)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHH
Confidence 69999999999999999999999999999999999999999875 455667889998865 88889999999999999
Q ss_pred HHHHHHhHhccccchHHHHHHhhHHHHHH
Q 015377 78 SEAALAWIVMPILTWRWLLALSAIPAFVL 106 (408)
Q Consensus 78 l~~~l~~~~~~~~~Wr~~f~i~~i~~~~~ 106 (408)
+++.+...+.+..+||+.|++.++..++.
T Consensus 156 ig~~l~g~l~~~~g~~~~f~~~~~~~~~~ 184 (475)
T TIGR00924 156 ISPLLAGVIAENYGYHVGFNLAAVGMVIG 184 (475)
T ss_pred HHHHHHHHHHHhcChHHHHHHHHHHHHHH
Confidence 99999888888889999999877544333
No 88
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.65 E-value=4.4e-13 Score=131.03 Aligned_cols=317 Identities=16% Similarity=0.074 Sum_probs=192.2
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhh-----hhhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAF-----SPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTF 74 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~ 74 (408)
|..||+.++.+.++..+..+..++ ..+.+.+++.-++.|++.+.. +.-.+.+-|..|+++...+.++.+...++
T Consensus 71 r~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~ni 150 (524)
T PF05977_consen 71 RFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNI 150 (524)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHH
Confidence 568999999999887765543332 246788999999999988765 45566788999999999999999999999
Q ss_pred HHHHHHHHHhHhccccchHHHHHHhhHHHHHHHHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCC
Q 015377 75 GSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGT 154 (408)
Q Consensus 75 G~~l~~~l~~~~~~~~~Wr~~f~i~~i~~~~~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~ 154 (408)
..++||.+++.+....|=.+.|.+.++.-++.+.....++..++ ++ ..+.++
T Consensus 151 ar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~----~~-~~~~e~----------------------- 202 (524)
T PF05977_consen 151 ARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPPP----PS-SLPRER----------------------- 202 (524)
T ss_pred HHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc----cc-ccchhh-----------------------
Confidence 99999999998877778888898887765544333333322110 00 000000
Q ss_pred CCcccccCCCCCccccccccccccccccccchhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccc
Q 015377 155 NDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSI 234 (408)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 234 (408)
..+ ..++ .++.....+..+..++...........++ ...|.+....
T Consensus 203 --------------~~~-------~l~~---G~ryv~~~~~l~~~l~~~~~~~l~~~a~~---aLlPl~a~~~------- 248 (524)
T PF05977_consen 203 --------------FFS-------ALRE---GLRYVRSSPPLRSVLLRSFLFNLFASAVW---ALLPLFARDV------- 248 (524)
T ss_pred --------------hhh-------hHHH---HHHHHhcchHHHHHHHHHHHHHHhhhHHH---HhhhHHHHHH-------
Confidence 000 0000 11222222333333222222111111111 1223221100
Q ss_pred ccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhh
Q 015377 235 LLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTF 314 (408)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (408)
.+.+...........++++++|.++.+.+.+|+++++++..+.+..++.++.+....+.+.....+++..++.....
T Consensus 249 ---l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~ 325 (524)
T PF05977_consen 249 ---LGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAGAAWIIAN 325 (524)
T ss_pred ---hCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 01111222233344567788888888888888888887777766666655555554444443333333334334444
Q ss_pred hhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhc
Q 015377 315 IIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLI 382 (408)
Q Consensus 315 ~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 382 (408)
........+..|.++|+++.++..++...+..++..+.+.+.+..+....+.+.+++.+++.++....
T Consensus 326 ~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~~ 393 (524)
T PF05977_consen 326 SSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALRF 393 (524)
T ss_pred HHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHh
Confidence 55667778999999999999999988877777888888877777666556666555555555554433
No 89
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.64 E-value=2.7e-13 Score=132.36 Aligned_cols=328 Identities=18% Similarity=0.188 Sum_probs=174.3
Q ss_pred CcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcchhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 015377 2 EEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAA 81 (408)
Q Consensus 2 ~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~ 81 (408)
+|||..++.+.++..++.+.++.++|...++++-.+.|+|.|........++|..|.|+|+....+...........++.
T Consensus 105 fGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ 184 (599)
T PF06609_consen 105 FGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQELAALAISELVPNKWRGLGLAIASIPFIITTWISPL 184 (599)
T ss_pred hcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHH
Confidence 79999999999999999999999999999999999999997766554445789999999987776655544444445566
Q ss_pred HHhHhccccchHHHHHHhhHHHHHHHH--HHHhccCcchhHhhcCC---hhhHHHHHHHHHHH-------------cCCC
Q 015377 82 LAWIVMPILTWRWLLALSAIPAFVLLI--FIVFMPESPRYLCTKGR---ITDAHNILDKIAQF-------------NQTS 143 (408)
Q Consensus 82 l~~~~~~~~~Wr~~f~i~~i~~~~~~~--~~~~lpESp~~l~~~~~---~~~a~~~l~~~~~~-------------~~~~ 143 (408)
++..+..+.+|||.|++..+...+.++ +.++.| |++-..+++ ..|..+.+|.+.-. +-..
T Consensus 185 ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~P--P~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG 262 (599)
T PF06609_consen 185 IAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYFP--PPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGG 262 (599)
T ss_pred HHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhCC--CchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccC
Confidence 665555567999999999876555433 333444 333222222 22334445544421 1011
Q ss_pred CCCCCccCCCCCCcccccCCCCCccccc------cc-ccccc-ccccccchhhhccchhhHHHHHHHHHHHHHHHHHHHH
Q 015377 144 LPSGNLTSDGTNDLDEEFSTSEETPLLS------SA-RKRTT-VRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYG 215 (408)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (408)
.+... .+ +.+--..... .- ..+.. ..+++....+.+.+++ ......+..+...+.||+
T Consensus 263 ~~~~~-----W~------Sa~VIa~lviG~~~Lv~F~~wE~~~~~~~Pl~P~~Lf~~~r---~~~~~lvi~fi~G~~~~s 328 (599)
T PF06609_consen 263 YPYYP-----WK------SAHVIAPLVIGFVLLVAFVVWEWFGAPKDPLFPHRLFKDRR---GFAALLVISFISGMNFFS 328 (599)
T ss_pred CCCCC-----CC------CccchhhHHHHHHHHHHHHHhhhhccCCCCcCCHHHhccch---HHHHHHHHHHHHHHHHHH
Confidence 00000 00 0000000000 00 00000 0112222222221112 222223344444455666
Q ss_pred HHH-HHHhhhccCCCCCcccccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHH-HHHHHHHHHHHHHHHh-
Q 015377 216 IVL-LASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSM-TIMFIFVCIFLLPLVT- 292 (408)
Q Consensus 216 ~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~-~~~~~~~~~~~~~~~~- 292 (408)
... |..+...-..... .............+.+...|.++.+.+..|++|-+.. +++.....+++..+..
T Consensus 329 ~~~l~p~~~~~vf~~d~--------~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~ 400 (599)
T PF06609_consen 329 VNILWPQQVVNVFGSDP--------ISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAV 400 (599)
T ss_pred HHHHHHHHHhhhccCCC--------cccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHc
Confidence 554 4433321100000 0000111111222344556777788888888774444 4554444433333332
Q ss_pred -hhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHH
Q 015377 293 -LQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAV 353 (408)
Q Consensus 293 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~ 353 (408)
.++......+.....++..+..........-..|.+.-+++.|+..++..+||.++.-++.
T Consensus 401 ~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~ 462 (599)
T PF06609_consen 401 RPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYN 462 (599)
T ss_pred cCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 2222222333333333333333455666667789999999999999988888776655443
No 90
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.63 E-value=8.3e-13 Score=126.12 Aligned_cols=307 Identities=12% Similarity=-0.022 Sum_probs=157.7
Q ss_pred CCcchhHHHHHHHHHHH-HHHHHh-h--hhh-HHHHHHHHHHhhccCCc-chhhhHHHhhhcCCCcchhHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFV-AGLLSA-F--SPN-YISLLILRGLAGAGLGS-GHVFFSWFMEFVPPSNRGKWMVVFSTFWTF 74 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~-~~~~~~-~--~~~-~~~l~~~R~l~Gi~~g~-~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~ 74 (408)
|.||||..++...+... .....+ + .++ ...++..-++.++.... .+....+..|..++++|+...+....+..+
T Consensus 65 ~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~l 144 (390)
T TIGR02718 65 RLGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMI 144 (390)
T ss_pred cCCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHH
Confidence 46899987555533221 121112 1 222 22333333333232222 233445667888888888888888888889
Q ss_pred HHHHHHHHHhHhccccchHHHHHHhhHHHHHHHHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCC
Q 015377 75 GSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGT 154 (408)
Q Consensus 75 G~~l~~~l~~~~~~~~~Wr~~f~i~~i~~~~~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~ 154 (408)
|.++++.....+.+..+||..|++.++..++..+..++++|+++- +.+.+
T Consensus 145 G~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~~~~~~---~~~~~--------------------------- 194 (390)
T TIGR02718 145 GFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWLKDRAVA---SPEAP--------------------------- 194 (390)
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCCCcC---ccccc---------------------------
Confidence 999988777777778899999999987766654444455443210 00000
Q ss_pred CCcccccCCCCCccccccccccccccccccchhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccc
Q 015377 155 NDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSI 234 (408)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 234 (408)
+ ++ . ..++.+++++..+......+.+......+++. ..+.+. +.+
T Consensus 195 ---~------~~--------------~---~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~l~-~~G------ 239 (390)
T TIGR02718 195 ---L------AR--------------R---ASLFRFFRRPLAWSLLALALLSAMTAVSGFGL--SKLYLV-DAG------ 239 (390)
T ss_pred ---h------hh--------------H---HHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHH--hhHHHH-hcC------
Confidence 0 00 0 01112222222222222222222212222221 111111 110
Q ss_pred ccccCccchhHHHHHHH-HHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHH-HHHHHhh-----hhhHHHHHHHHHHH
Q 015377 235 LLSENVQDASVYINVFI-TSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIF-LLPLVTL-----QSNILLTALLSGAR 307 (408)
Q Consensus 235 ~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~~~~~ 307 (408)
.+.......... .....++|.++++++.||+|+|+.+..+.....+. +...... .+............
T Consensus 240 -----~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (390)
T TIGR02718 240 -----WPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGS 314 (390)
T ss_pred -----CCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHH
Confidence 111111121112 22355677889999999999999887765544221 1111111 11111111111111
Q ss_pred HHhhhhhhhhhhhcccccCC-chhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHH
Q 015377 308 MFSMGTFIIANIFAPEIYPT-SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVV 377 (408)
Q Consensus 308 ~~~~~~~~~~~~~~~el~p~-~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~ 377 (408)
+.....++.......+..+. +.++++.++.++...+|++++|.+.+.+.+..+....|.+.+++.+++.+
T Consensus 315 ~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 315 LITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 11122223444454555555 89999999999999999999999999888876655566665555555443
No 91
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.62 E-value=3e-12 Score=123.84 Aligned_cols=324 Identities=17% Similarity=0.223 Sum_probs=183.4
Q ss_pred chhHHHHHHHHHHHHHHHHhhh-hh-HHHHHHHHHHhhccCCcchhh-hHHHhhhcCCCcc-------------------
Q 015377 4 GRMSILGGALVTFVAGLLSAFS-PN-YISLLILRGLAGAGLGSGHVF-FSWFMEFVPPSNR------------------- 61 (408)
Q Consensus 4 Rr~~~~~~~~~~~~~~~~~~~~-~~-~~~l~~~R~l~Gi~~g~~~~~-~~~~~E~~p~~~R------------------- 61 (408)
||+.+....++..+++++..+. ++ +....+.-++.-++.+...+. .+++-|.++++++
T Consensus 100 Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~ 179 (477)
T PF11700_consen 100 RKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYLPDLARPEPRVRAAREPSANGNISDSEYE 179 (477)
T ss_pred chHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCChhhhhhhhhhccCCCChhhhh
Confidence 5555666666666677666664 33 333333333333455544443 4678899999998
Q ss_pred -------hhHHHHHHHHHHHHHHHHHHHHhHhc-c-------ccchHHHHHHhhHHHHHH-HHHHHhccCcchhHhhcCC
Q 015377 62 -------GKWMVVFSTFWTFGSVSEAALAWIVM-P-------ILTWRWLLALSAIPAFVL-LIFIVFMPESPRYLCTKGR 125 (408)
Q Consensus 62 -------g~~~~~~~~~~~~G~~l~~~l~~~~~-~-------~~~Wr~~f~i~~i~~~~~-~~~~~~lpESp~~l~~~~~ 125 (408)
++..+.-....++|.++.-.+...+. . ...-|..+.+.++.-+++ ++.++++||.|+--..+..
T Consensus 180 ~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~ 259 (477)
T PF11700_consen 180 AVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSG 259 (477)
T ss_pred hHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcc
Confidence 88888766666677776655554431 1 223588888888875554 6667788887752000000
Q ss_pred hhhHHHHHHHHHHHcCCCCCCCCccCCCCCCcccccCCCCCccccccccccccccccccchhhhccchhhHHHHHHHHHH
Q 015377 126 ITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVL 205 (408)
Q Consensus 126 ~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (408)
.+-.....+++.+ .++...+-+.....++.+++
T Consensus 260 ~~~~~~g~~~l~~-----------------------------------------------t~k~~~~~~~~~~fLia~~l 292 (477)
T PF11700_consen 260 SSYLRFGFKRLWR-----------------------------------------------TFKEIRKLRQLFLFLIAYFL 292 (477)
T ss_pred hhHHHHHHHHHHH-----------------------------------------------HHHHHHhChHHHHHHHHHHH
Confidence 0000111111111 11111111111122222232
Q ss_pred HH--HHHHHHHHHHHHHHhhhccCCCCCcccccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchH--HHHHHHHH
Q 015377 206 YF--GNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRK--LSMTIMFI 281 (408)
Q Consensus 206 ~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR--~~~~~~~~ 281 (408)
+. .+.+...+..+....+ +.+..+.....++..+.+++|+++.+++.||+|.| +++..+.+
T Consensus 293 ~~dg~~ti~~~~~i~a~~~l---------------g~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~ 357 (477)
T PF11700_consen 293 YSDGVNTIISFAGIYATEVL---------------GMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLI 357 (477)
T ss_pred HHHHHHHHHHHHHHHHHHhc---------------CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHH
Confidence 21 1222222222211111 12233444556666788999999999999999999 66665544
Q ss_pred HHHH-HHHHHH-h------hhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHH
Q 015377 282 FVCI-FLLPLV-T------LQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAV 353 (408)
Q Consensus 282 ~~~~-~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~ 353 (408)
...+ .+..+. . ..+.+....+......+..+..+..-.+.+|+.|....+.-+|+-...++..++++|++++
T Consensus 358 ~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g 437 (477)
T PF11700_consen 358 LWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFG 437 (477)
T ss_pred HHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 4422 222222 0 2222333333333333344556788889999999999999999999999999999999999
Q ss_pred HHhhhcch-hhHHHHHHHHHHHHHHHHHhcccccCCcc
Q 015377 354 GLVTSCHQ-TAAILLLEALIVLSVVVILLIPFETKGKE 390 (408)
Q Consensus 354 ~l~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~et~~~~ 390 (408)
.+.+..+. ...+....++.+++.++ +...++.|++.
T Consensus 438 ~i~~~tg~~r~g~~~l~~lf~~gl~l-l~~v~~~~g~~ 474 (477)
T PF11700_consen 438 LITDATGSQRYGFLFLLVLFLIGLIL-LFFVDVEKGRE 474 (477)
T ss_pred HHHHHhCCchhHHHHHHHHHHHHHHH-Hhhccchhhhh
Confidence 88877663 34555555555566555 45556777763
No 92
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.62 E-value=4.4e-13 Score=131.05 Aligned_cols=100 Identities=18% Similarity=0.163 Sum_probs=87.0
Q ss_pred CcchhHHHHHHHHHHHHHHHHhhhhhHHH-HHHHHHHhhccCCcc-hhhhHHHhhhcCCC--cchhHHHHHHHHHHHHHH
Q 015377 2 EEGRMSILGGALVTFVAGLLSAFSPNYIS-LLILRGLAGAGLGSG-HVFFSWFMEFVPPS--NRGKWMVVFSTFWTFGSV 77 (408)
Q Consensus 2 ~gRr~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~--~Rg~~~~~~~~~~~~G~~ 77 (408)
.||||+++++.+++.++.++++++++... ++++|+++|+|.|.. +...+.+.|.+|++ +|+...++++.++++|..
T Consensus 78 ~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~ 157 (489)
T PRK10207 78 LGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSL 157 (489)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHH
Confidence 79999999999999999999999877554 558999999999875 45567889999987 457788999999999999
Q ss_pred HHHHHHhHhccccchHHHHHHhhH
Q 015377 78 SEAALAWIVMPILTWRWLLALSAI 101 (408)
Q Consensus 78 l~~~l~~~~~~~~~Wr~~f~i~~i 101 (408)
+++.++..+.++.|||+.|++.++
T Consensus 158 ~g~~l~g~l~~~~gw~~~F~i~~i 181 (489)
T PRK10207 158 ISLSLAPVIADKFGYSVTYNLCGA 181 (489)
T ss_pred HHHHHHHHHHHhhChHHHHHHHHH
Confidence 999999988888899999998755
No 93
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.61 E-value=6.4e-13 Score=130.53 Aligned_cols=104 Identities=15% Similarity=0.070 Sum_probs=85.7
Q ss_pred CcchhHHHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCc--chhHHHHHHHHHHHHHH
Q 015377 2 EEGRMSILGGALVTFVAGLLSAFSP-NYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSN--RGKWMVVFSTFWTFGSV 77 (408)
Q Consensus 2 ~gRr~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~--Rg~~~~~~~~~~~~G~~ 77 (408)
.|||+.+..+.++..++..+.++++ +...+.++|++.|++.|.. +....++.|++|+++ |+...++++.+..+|..
T Consensus 85 ~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~ 164 (500)
T PRK09584 85 LGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSF 164 (500)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHH
Confidence 5999999999999999988888874 5667788999999998865 444567889998754 44567888999999999
Q ss_pred HHHHHHhHhccccchHHHHHHhhHHHHH
Q 015377 78 SEAALAWIVMPILTWRWLLALSAIPAFV 105 (408)
Q Consensus 78 l~~~l~~~~~~~~~Wr~~f~i~~i~~~~ 105 (408)
+++.+...+.+..|||+.|.+.++..++
T Consensus 165 ~gp~i~g~l~~~~g~~~~F~i~~i~~~i 192 (500)
T PRK09584 165 FSMLATPWLAAKYGWSVAFALSVVGMLI 192 (500)
T ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHH
Confidence 9999998888888999999998764444
No 94
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.59 E-value=3.2e-12 Score=117.77 Aligned_cols=275 Identities=13% Similarity=0.096 Sum_probs=155.5
Q ss_pred hhhhhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHhHhcc-------------
Q 015377 23 AFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMP------------- 88 (408)
Q Consensus 23 ~~~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~~~------------- 88 (408)
+...+|..+++.-|+.|.|.+.. ....+|+++..|++++.+.+++.+.++.+|.+++|.++..+..
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~ 84 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA 84 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence 35578999999999999999985 5678899999999999999999999999999999999876542
Q ss_pred ---ccchHHHHHHhhHHHHHHHHHHH--hccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCCCCcccccCC
Q 015377 89 ---ILTWRWLLALSAIPAFVLLIFIV--FMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFST 163 (408)
Q Consensus 89 ---~~~Wr~~f~i~~i~~~~~~~~~~--~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (408)
..+||+++++.+...++..+.+. .+||.++ +.++ +.
T Consensus 85 ~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~------~~~~---------------------------------~~ 125 (310)
T TIGR01272 85 NAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQE------ADVA---------------------------------RV 125 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCc------cccc---------------------------------cc
Confidence 14799999966554433333332 3454211 0000 00
Q ss_pred CCCccccccccccccccccccchhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccCccch
Q 015377 164 SEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDA 243 (408)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 243 (408)
.+++ . .++ ...+..++.+- -.+..+.+.+.-. +...|.+....+... ...+....
T Consensus 126 ~~~~---------~-~~~-----~~~~~~~~~~l-~~~~~f~yvg~e~---~~~~w~~~yl~~~~~------~g~s~~~a 180 (310)
T TIGR01272 126 SSGD---------T-TQK-----TSAFQFTHLVL-GALGIFVYVGAEV---SAGSFLVNFLSDPHA------LGLPEDQA 180 (310)
T ss_pred cccc---------c-cch-----hhHHhhHHHHH-HHHHHHHHHHHHH---HHHHHHHHHHHhccc------CCCCHHHH
Confidence 0000 0 000 00000111111 1111222222111 111222221110000 00011111
Q ss_pred hHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhccc
Q 015377 244 SVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPE 323 (408)
Q Consensus 244 ~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 323 (408)
. ..........++|.++++++.||+|+|+.+..+..++.+............... ......++....++.......+
T Consensus 181 ~--~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~~~-~~~l~g~~~s~i~P~~~s~a~~ 257 (310)
T TIGR01272 181 A--HFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVAMW-FVLALGLFNSIMFPTIFSLALN 257 (310)
T ss_pred H--HHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHHHH-HHHHHHHHHHHHHHHHHHHHHh
Confidence 1 122333456778999999999999998887766655554443332222222122 2222334444556777777778
Q ss_pred ccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHH
Q 015377 324 IYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAIL 366 (408)
Q Consensus 324 l~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~ 366 (408)
.+|.+ .+++.++. ..+.+|+.+.|.+.+.+.|..+...++.
T Consensus 258 ~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~ 298 (310)
T TIGR01272 258 ALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFA 298 (310)
T ss_pred hhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHH
Confidence 88765 45566664 6788999999999998877666545544
No 95
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.56 E-value=6.9e-13 Score=119.34 Aligned_cols=116 Identities=21% Similarity=0.156 Sum_probs=93.1
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcchhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEA 80 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~ 80 (408)
+.|||+++++++...+++..+-+++.|+..+++.|++.|+.-|--.+..++++|+.++++|++.++..+.++.+|.++||
T Consensus 94 ~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGP 173 (451)
T KOG2615|consen 94 RYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGP 173 (451)
T ss_pred hhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcc
Confidence 47999999999999999999999999998888889999999988778888999999999999999999999999999999
Q ss_pred HHHhHhcc---ccc--h-HHHHHHhhHHHHH-HHHHHHhccCc
Q 015377 81 ALAWIVMP---ILT--W-RWLLALSAIPAFV-LLIFIVFMPES 116 (408)
Q Consensus 81 ~l~~~~~~---~~~--W-r~~f~i~~i~~~~-~~~~~~~lpES 116 (408)
.++..+.. ..+ | -.+-++..+.... ...+.+++||+
T Consensus 174 mIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpET 216 (451)
T KOG2615|consen 174 MIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPET 216 (451)
T ss_pred hhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 98876543 111 1 1112222233333 45667889999
No 96
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.56 E-value=4e-13 Score=126.42 Aligned_cols=117 Identities=15% Similarity=0.180 Sum_probs=99.5
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcchhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEA 80 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~ 80 (408)
+.|-|+++.++.+.+++.+++.++++++..|.+.|++.|++.|+..+...++..++|+++|+++.+..+.+..+|.++++
T Consensus 88 rlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~llGvaEA~~~A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~ 167 (511)
T TIGR00806 88 YLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFYSVTMAARIAYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSS 167 (511)
T ss_pred HhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46889999999999999999999999999999999999999999876677899999999999999999999999999999
Q ss_pred HHHhHhccccchHHHHHHhhH---HHHHHHHHHHhccCcch
Q 015377 81 ALAWIVMPILTWRWLLALSAI---PAFVLLIFIVFMPESPR 118 (408)
Q Consensus 81 ~l~~~~~~~~~Wr~~f~i~~i---~~~~~~~~~~~lpESp~ 118 (408)
+++.. +...+||+.+-+.-+ ...+.++..+++|-.++
T Consensus 168 ~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~~~ 207 (511)
T TIGR00806 168 VLGQL-LVTLGWISYSTLNIISLVFMTFSVFLALFLKRPKR 207 (511)
T ss_pred HHHHH-HHhcCchhHHHHHHHHHHHHHHHHHHHHhCCCCch
Confidence 99887 456799987766543 22333556678884443
No 97
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.52 E-value=1.2e-11 Score=119.16 Aligned_cols=341 Identities=15% Similarity=0.076 Sum_probs=176.8
Q ss_pred CCcchhHHHHH-HHHHHHHHHHHhhhhhHHHHH------------HHHHHhhc-----cCCcc-hhhhHHHhhhcCCCcc
Q 015377 1 MEEGRMSILGG-ALVTFVAGLLSAFSPNYISLL------------ILRGLAGA-----GLGSG-HVFFSWFMEFVPPSNR 61 (408)
Q Consensus 1 ~~gRr~~~~~~-~~~~~~~~~~~~~~~~~~~l~------------~~R~l~Gi-----~~g~~-~~~~~~~~E~~p~~~R 61 (408)
|.||||.+++. .....++..+.++++++..++ +.+++.|+ +.... ...-++++|.+|+++|
T Consensus 69 r~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~ 148 (477)
T TIGR01301 69 RFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDAR 148 (477)
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhH
Confidence 58999999886 444445556667776654322 13444444 33322 2234578999999865
Q ss_pred --hhHHHHHHHHHHHHHHHHHHHHhHhc--cc-------------cchHHHHHHhhHHHHHH-HHHHHhccCcchhHhhc
Q 015377 62 --GKWMVVFSTFWTFGSVSEAALAWIVM--PI-------------LTWRWLLALSAIPAFVL-LIFIVFMPESPRYLCTK 123 (408)
Q Consensus 62 --g~~~~~~~~~~~~G~~l~~~l~~~~~--~~-------------~~Wr~~f~i~~i~~~~~-~~~~~~lpESp~~l~~~ 123 (408)
+...++.+.+..+|.++++.+++... +. .+-|+.|++.++..++. .+..+..+|.|-.. .
T Consensus 149 ~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~--~ 226 (477)
T TIGR01301 149 RTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIG--S 226 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCc--c
Confidence 57888899999999999998876531 10 16799999988766664 44556778876310 0
Q ss_pred CChhhHHHHHHHHHHHcCCCCCCCCccCCCCCCcccccCCCCCccccccccccccccccccchhhhccchhhHHHHHH-H
Q 015377 124 GRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTIL-L 202 (408)
Q Consensus 124 ~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 202 (408)
++.++ ++.++ .++.++. ...++-++.++. -|+..++.++ .
T Consensus 227 ~~~~~--------------------------~~~~~-~~~~~~~----------~~~~~i~~~~~~--mP~~m~~l~~vq 267 (477)
T TIGR01301 227 DDFIN--------------------------SEAAP-PSKHGEE----------AFFGELFGAFKY--LPRPVWILLLVT 267 (477)
T ss_pred ccchh--------------------------hhccc-ccccchh----------hhHHHHHHHHHH--CCHHHHHHHHHH
Confidence 00000 00000 0000000 000011111111 1333333322 2
Q ss_pred HHHHHHHH-HHHHHHHHHHHhhhccCCCCCcccccccCccch-h-HHHHHHHHHhhhhHHHHHHHHHHhhhch-HHHHHH
Q 015377 203 WVLYFGNS-FVYYGIVLLASELSGSQSKCSSSILLSENVQDA-S-VYINVFITSFAELPGLLTAALLVDRVGR-KLSMTI 278 (408)
Q Consensus 203 ~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~g~~~~~~l~dr~gr-R~~~~~ 278 (408)
++.|++.. +.+|...+...++....... ....+.+ . -.....+.++...+.+++-..+.+|+|+ |.....
T Consensus 268 ffsW~a~f~~~~y~T~~vg~~v~~~~~~~------~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~ 341 (477)
T TIGR01301 268 CLNWIAWFPFILFDTDWMGREVYGGSVNQ------GAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGI 341 (477)
T ss_pred HHHHHHHHHHHHhccHHHHHHHcCCCCcc------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHH
Confidence 23332211 11222222121222111000 0000011 0 0111233334444556677788899985 666677
Q ss_pred HHHHHHHHHHHHHhhhh------h---------------HHHHHHHHHHHHHhhhhhhhhhhhcccccCCchh--hHHHh
Q 015377 279 MFIFVCIFLLPLVTLQS------N---------------ILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR--STGAG 335 (408)
Q Consensus 279 ~~~~~~~~~~~~~~~~~------~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R--~~a~g 335 (408)
+.++.++++....+..+ . ...........+.....++++|.+.+|..|.+.| +.-.|
T Consensus 342 s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mg 421 (477)
T TIGR01301 342 VNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMG 421 (477)
T ss_pred HHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhh
Confidence 75555554444332111 0 1111222222223344568899999999996544 78888
Q ss_pred HHHHhhhHhHhhHHHHHHHHhhhcch-h-hHHHHHHHHHHHHHHHHHhcccccCC
Q 015377 336 VAYAVGRIGGMVCPLVAVGLVTSCHQ-T-AAILLLEALIVLSVVVILLIPFETKG 388 (408)
Q Consensus 336 i~~~~~~~~~~~~p~~~~~l~~~~~~-~-~~~~~~~~~~~i~~~~~~~~~~et~~ 388 (408)
+-|.+-.+..++..+..+.+.+..+. . ..+.+-++..+++++...++.|.++.
T Consensus 422 ilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 422 VLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRPRV 476 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 88888887777777666665544432 2 34445557778888898998888764
No 98
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.51 E-value=4.4e-13 Score=134.76 Aligned_cols=116 Identities=16% Similarity=0.233 Sum_probs=95.5
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhh---------------------------------------------------hHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSP---------------------------------------------------NYI 29 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~---------------------------------------------------~~~ 29 (408)
|.|||+.+.++.+++++++++.++.+ .+.
T Consensus 94 r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (633)
T TIGR00805 94 KLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWL 173 (633)
T ss_pred ccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceeh
Confidence 46899999999999999999887763 256
Q ss_pred HHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHhHhcccc------------------
Q 015377 30 SLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPIL------------------ 90 (408)
Q Consensus 30 ~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~~~~~------------------ 90 (408)
.++++|+++|+|.+.. +...+|+.|++|+++|++..++++....+|.+++++++..+.+.+
T Consensus 174 ~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dp 253 (633)
T TIGR00805 174 LFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDP 253 (633)
T ss_pred hhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCc
Confidence 7889999999999886 456778999999999999999999999999999998877654321
Q ss_pred ----chHHHHHHhhHHHHHHHHHHHhccCc
Q 015377 91 ----TWRWLLALSAIPAFVLLIFIVFMPES 116 (408)
Q Consensus 91 ----~Wr~~f~i~~i~~~~~~~~~~~lpES 116 (408)
.||..|++.++..++..+..+++||.
T Consensus 254 rWiGaWwl~Fli~g~l~~l~~v~l~~~p~~ 283 (633)
T TIGR00805 254 RWIGAWWIGFLICGGVALLTSIPFFFFPKA 283 (633)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 37888888888877765656667765
No 99
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.50 E-value=6.5e-11 Score=108.02 Aligned_cols=303 Identities=15% Similarity=0.172 Sum_probs=183.5
Q ss_pred CCcchhHHHHHHHHHHHHHHHH---hhhhhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLS---AFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGS 76 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~ 76 (408)
|.|+|+.++++..++.++..+- +-..+|..++++=|+.|.|.|.- ....+|++-.-|+++-...+++.+.+.++|+
T Consensus 74 k~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa 153 (422)
T COG0738 74 KLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGA 153 (422)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHH
Confidence 5799999999999999988766 45678999999999999999975 5667888888888888888999999999999
Q ss_pred HHHHHHHhHhcc-------------------ccchHHHHHHhhHHHHHHHHHHHh--ccCcchhHhhcCChhhHHHHHHH
Q 015377 77 VSEAALAWIVMP-------------------ILTWRWLLALSAIPAFVLLIFIVF--MPESPRYLCTKGRITDAHNILDK 135 (408)
Q Consensus 77 ~l~~~l~~~~~~-------------------~~~Wr~~f~i~~i~~~~~~~~~~~--lpESp~~l~~~~~~~~a~~~l~~ 135 (408)
+++|+++..+.. ...||+++...+...+++.+.... +||-+.
T Consensus 154 ~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~----------------- 216 (422)
T COG0738 154 ILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQV----------------- 216 (422)
T ss_pred HHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCc-----------------
Confidence 999998765432 114777777665544444333322 222110
Q ss_pred HHHHcCCCCCCCCccCCCCCCcccccCCCCCccccccccccccccccccchhhhccchhhHHHHHHHHHHHHHHHHHHHH
Q 015377 136 IAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYG 215 (408)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (408)
+ ++++. ++ + . ....++++.++++.-.+..+.|.+.....+.
T Consensus 217 ----------------~----------~~~~~-------~~----~-~-~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gs 257 (422)
T COG0738 217 ----------------A----------APSLG-------AS----G-S-AGLSSLFQNKHLRLGVLAIFLYVGAEVAIGS 257 (422)
T ss_pred ----------------c----------ccccc-------cc----c-c-chHHHHHhChHHHHHHHHHHHHHhHHHHHHH
Confidence 0 00000 00 0 0 0122344445555555555566655444433
Q ss_pred HHHHHHhhhccCCCCCcccccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhh
Q 015377 216 IVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQS 295 (408)
Q Consensus 216 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~ 295 (408)
.... ...+. ...+.+....+...+ -.+.++|-+++.++.+|+...+.+........+.++......+
T Consensus 258 fl~~---y~~~~--------~g~~~~~aa~~~s~~--~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g 324 (422)
T COG0738 258 FLVS---YLEEL--------LGLNEQQAAYYLSFF--WVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIGG 324 (422)
T ss_pred HHHH---HHHhc--------CCccHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 2221 11100 001122222233222 2456789999999999998888887766555554444444443
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHH
Q 015377 296 NILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLS 375 (408)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~ 375 (408)
...+..+.++.++....++..+....+..|.+.-..+..++ .+-+||.+.|.+.+.+.|..+....+......|.+-
T Consensus 325 -~v~~~~l~~ig~F~simfPTIfslal~~l~~~ts~~s~~l~--maivGGAiiP~l~G~i~d~~g~~~~~~~~pllc~ly 401 (422)
T COG0738 325 -VVALYALFLIGLFNSIMFPTIFSLALKNLGEHTSVGSGLLV--MAIVGGAIIPPLQGVIADMFGIQLTFLIVPLLCYLY 401 (422)
T ss_pred -hHHHHHHHHHHHHhHHHHHHHHHHHHhccCccccccceeee--eheecchHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 33333444445555667788888888999844333333333 344788899999998888766544444333333333
No 100
>PRK09669 putative symporter YagG; Provisional
Probab=99.49 E-value=2.6e-11 Score=117.83 Aligned_cols=107 Identities=12% Similarity=0.012 Sum_probs=67.7
Q ss_pred HhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh-h-hhhHHHHHHHHHHHHHhhhhhhhhhhhcccccC----
Q 015377 253 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT-L-QSNILLTALLSGARMFSMGTFIIANIFAPEIYP---- 326 (408)
Q Consensus 253 ~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p---- 326 (408)
.+..+++.++.++++||+|+|+.+..+.....+....+.. . ++.........+..+......+..+.+.+|..+
T Consensus 274 ~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~ 353 (444)
T PRK09669 274 MIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEK 353 (444)
T ss_pred HHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 4556778888999999999999887765544332222222 1 222222222222223333445677888888875
Q ss_pred ---CchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhc
Q 015377 327 ---TSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSC 359 (408)
Q Consensus 327 ---~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~ 359 (408)
.+..+...|+.+.+.++|..++|.+.+.+.+..
T Consensus 354 ~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~ 389 (444)
T PRK09669 354 RSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWV 389 (444)
T ss_pred hcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 334466778888888999999998887766543
No 101
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.49 E-value=6.8e-13 Score=120.11 Aligned_cols=113 Identities=19% Similarity=0.281 Sum_probs=101.0
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcch-hhhHHHhhhcCCCc-chhHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSN-RGKWMVVFSTFWTFGSVS 78 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~~-~~~~~~~E~~p~~~-Rg~~~~~~~~~~~~G~~l 78 (408)
|.|+|..++.+..++..++++-++..+|+++++.|.++|+|.+... +....+++.+|.++ ||+++++.-.+.++|.++
T Consensus 132 ~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lv 211 (464)
T KOG3764|consen 132 RIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLV 211 (464)
T ss_pred HhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhcccee
Confidence 4699999999999999999999999999999999999999988764 55778889988866 799999999999999999
Q ss_pred HHHHHhHhccccchHHHHHHhhHHHHHHHHHHHhc
Q 015377 79 EAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFM 113 (408)
Q Consensus 79 ~~~l~~~~~~~~~Wr~~f~i~~i~~~~~~~~~~~l 113 (408)
+|+.+.++-+..|.+.+|.+.++..++-....+++
T Consensus 212 gPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~v 246 (464)
T KOG3764|consen 212 GPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLV 246 (464)
T ss_pred cCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHhe
Confidence 99999988778899999999999888876665554
No 102
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.45 E-value=6.8e-12 Score=122.26 Aligned_cols=305 Identities=12% Similarity=0.019 Sum_probs=157.4
Q ss_pred chhHHHHHHHHHH-HHHHHHhhhhhHHHHH-HHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHH---HHHHHHH
Q 015377 4 GRMSILGGALVTF-VAGLLSAFSPNYISLL-ILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFST---FWTFGSV 77 (408)
Q Consensus 4 Rr~~~~~~~~~~~-~~~~~~~~~~~~~~l~-~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~---~~~~G~~ 77 (408)
||+.++++.++.+ +.....+..++...+. +.+++.+++.+.. .+.-.+..|..+ ++++...+.... ...+|.+
T Consensus 94 Rr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~ 172 (468)
T TIGR00788 94 KRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGL 172 (468)
T ss_pred chHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHH
Confidence 4555666665552 3323334445544444 4888888887764 455678889998 555443333333 3457999
Q ss_pred HHHHHHhHhccccchHHHHHHhhHHHHHHHHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCCCCc
Q 015377 78 SEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDL 157 (408)
Q Consensus 78 l~~~l~~~~~~~~~Wr~~f~i~~i~~~~~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 157 (408)
+++.++..+.+..+||..|++.++..++..+...++||++.....+.+ ++... .
T Consensus 173 vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~-~~~~~-------------------------~ 226 (468)
T TIGR00788 173 ISSLLGGPLLDKTLTRILFLITAALLLLQLFVSNLSKERRAFVRPRIG-TYLEM-------------------------N 226 (468)
T ss_pred HHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHhccccccccccccc-ccchh-------------------------h
Confidence 999888888777899999999887666665666778886321000000 00000 0
Q ss_pred ccccCCCCCccccccccccccccccccchhhhcc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 015377 158 DEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILL 236 (408)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 236 (408)
.... ... ..+ ..++..+.....+ ++..++.....++. |. ..+........ ....
T Consensus 227 ~~~~-~~~---~~~-------~~~~~~~~l~~~l~~~~i~~~l~fifl~-------~~----~~~~~~~~~f~---~~~~ 281 (468)
T TIGR00788 227 MALL-TLG---VLA-------NVKVQILGLRGAIQLLEIAKPLIFIFLS-------YA----NLPGASGSVFC---ATTQ 281 (468)
T ss_pred hhhh-hhh---HHH-------HHHHHHHHHHHHHhcHHHHHHHHHHHHH-------Hh----hcCCCCceeEE---EEcc
Confidence 0000 000 000 0000001111111 22222211111110 10 01111000000 0000
Q ss_pred ccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh----h------hhhHHHHHHHHHH
Q 015377 237 SENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT----L------QSNILLTALLSGA 306 (408)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~----~------~~~~~~~~~~~~~ 306 (408)
..+.............++..++|..+.+.+.+|++.|+++..+.++..+....... . .+...........
T Consensus 282 ~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~ 361 (468)
T TIGR00788 282 CLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIA 361 (468)
T ss_pred cCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHH
Confidence 01112223333444556788889999999999999999988877666554322110 0 1111110111111
Q ss_pred HHHhhhhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcc
Q 015377 307 RMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH 360 (408)
Q Consensus 307 ~~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~ 360 (408)
.+.....+.....+.+++.|.+.+++.+++.+++..+|+.+++.+.+.+.+..+
T Consensus 362 ~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 362 EVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 111112234457788899999999999999999999999999977776665544
No 103
>PRK11462 putative transporter; Provisional
Probab=99.42 E-value=3e-10 Score=110.68 Aligned_cols=108 Identities=17% Similarity=0.056 Sum_probs=66.8
Q ss_pred CCcchhHHH-HHHHHHHHHHHHHhhhhh------HHHHHHHHHHhhccCCcchh-hhHHHhhhcC-CCcchhHHHHHHHH
Q 015377 1 MEEGRMSIL-GGALVTFVAGLLSAFSPN------YISLLILRGLAGAGLGSGHV-FFSWFMEFVP-PSNRGKWMVVFSTF 71 (408)
Q Consensus 1 ~~gRr~~~~-~~~~~~~~~~~~~~~~~~------~~~l~~~R~l~Gi~~g~~~~-~~~~~~E~~p-~~~Rg~~~~~~~~~ 71 (408)
|.||||..+ ++.+...++.++.-..|+ ...+.+.-++..++.-...+ -.++..|.++ ++||.+..++-..+
T Consensus 75 r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~ 154 (460)
T PRK11462 75 RWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVL 154 (460)
T ss_pred CCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 578887755 455666666555443442 33445555555554433322 2345678888 68899999998888
Q ss_pred HHHHHHHHHHHHhHhcc-------ccchHHHHHHhhHHHHHHHH
Q 015377 72 WTFGSVSEAALAWIVMP-------ILTWRWLLALSAIPAFVLLI 108 (408)
Q Consensus 72 ~~~G~~l~~~l~~~~~~-------~~~Wr~~f~i~~i~~~~~~~ 108 (408)
..+|..+++.+...+.. ..+|+....+.+++.++...
T Consensus 155 ~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~ 198 (460)
T PRK11462 155 ATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLA 198 (460)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHH
Confidence 88887777665433221 13688887777776655443
No 104
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.41 E-value=1.8e-10 Score=111.43 Aligned_cols=289 Identities=19% Similarity=0.183 Sum_probs=161.7
Q ss_pred CCcchhHHH-HHHHHHHHHHHHHhhh-h-------hHHHHHHHHHHhhccCCcchh-hhHHHhhhcCC-CcchhHHHHHH
Q 015377 1 MEEGRMSIL-GGALVTFVAGLLSAFS-P-------NYISLLILRGLAGAGLGSGHV-FFSWFMEFVPP-SNRGKWMVVFS 69 (408)
Q Consensus 1 ~~gRr~~~~-~~~~~~~~~~~~~~~~-~-------~~~~l~~~R~l~Gi~~g~~~~-~~~~~~E~~p~-~~Rg~~~~~~~ 69 (408)
|.||||..+ ++..+..++.++.... | ....+.+.-++..++.....+ ..++..|.++. ++|.+..+.-+
T Consensus 67 r~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~ 146 (428)
T PF13347_consen 67 RWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRM 146 (428)
T ss_pred cccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHH
Confidence 578777755 5666666666666555 4 223346666666665554433 34567899984 78999999888
Q ss_pred HHHHHHHHHHHHHHhHhc----cc---cchHHHHHHhhHHHHHHHH-HHHhccCcchhHhhcCChhhHHHHHHHHHHHcC
Q 015377 70 TFWTFGSVSEAALAWIVM----PI---LTWRWLLALSAIPAFVLLI-FIVFMPESPRYLCTKGRITDAHNILDKIAQFNQ 141 (408)
Q Consensus 70 ~~~~~G~~l~~~l~~~~~----~~---~~Wr~~f~i~~i~~~~~~~-~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~ 141 (408)
.+..+|.++.+.+...+. +. .+|++...+.++..++..+ ..+..+|.++ +.+
T Consensus 147 ~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~------~~~-------------- 206 (428)
T PF13347_consen 147 IFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKERSV------EVT-------------- 206 (428)
T ss_pred HHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeeeccc------ccc--------------
Confidence 888888865555444332 11 2799999988887776544 4555566110 000
Q ss_pred CCCCCCCccCCCCCCcccccCCCCCccccccccccccccccccchhhhccchhhHHHHHHH-HHHHHHHHHHHHHHHHHH
Q 015377 142 TSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILL-WVLYFGNSFVYYGIVLLA 220 (408)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 220 (408)
++ .++.+ -.+.++.+++.|.+...... .+.++...+..-...++.
T Consensus 207 -----------------~~---~~~~~--------------~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~ 252 (428)
T PF13347_consen 207 -----------------EQ---EKKIS--------------LRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYF 252 (428)
T ss_pred -----------------cc---ccccc--------------cccchhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHH
Confidence 00 00000 00112233333333322222 222222222111112222
Q ss_pred HhhhccCCCCCcccccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhh--hhHH
Q 015377 221 SELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ--SNIL 298 (408)
Q Consensus 221 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~--~~~~ 298 (408)
....... ........+..+..+++.++.++++||+|+|+.+..+..+..+......... +...
T Consensus 253 ~~vl~~~---------------~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (428)
T PF13347_consen 253 TYVLGNE---------------GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWL 317 (428)
T ss_pred HHHhcCc---------------hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHH
Confidence 2221110 0111222344566788899999999999999999888777766554444332 3333
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhcccccCC-------chhhHHHhHHHHhhhHhHhhHHHHHHHHhhh
Q 015377 299 LTALLSGARMFSMGTFIIANIFAPEIYPT-------SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS 358 (408)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~el~p~-------~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~ 358 (408)
...............+...+.+.+|+.+. +..+.-.|+.+...+++..+++.+.+.+++.
T Consensus 318 ~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~ 384 (428)
T PF13347_consen 318 VLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLAL 384 (428)
T ss_pred HHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHH
Confidence 33333333333344557788888988873 3347778888888899888888877766543
No 105
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.41 E-value=1.7e-10 Score=113.06 Aligned_cols=108 Identities=16% Similarity=0.096 Sum_probs=66.1
Q ss_pred HHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh----hhhh-HHHHHHHHHHHHHhhhhhhhhhhhccccc
Q 015377 251 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT----LQSN-ILLTALLSGARMFSMGTFIIANIFAPEIY 325 (408)
Q Consensus 251 ~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~el~ 325 (408)
+..+..+++.++.+++.||+|+|+.+..+..+..+....+.. ..+. ...........+.....+...+.+.+|..
T Consensus 274 ~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~i 353 (473)
T PRK10429 274 YAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTV 353 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 334667888899999999999999987665543332222211 1111 21111111222222334466778888884
Q ss_pred C-----Cchh--hHHHhHHHHhhhHhHhhHHHHHHHHhhh
Q 015377 326 P-----TSMR--STGAGVAYAVGRIGGMVCPLVAVGLVTS 358 (408)
Q Consensus 326 p-----~~~R--~~a~gi~~~~~~~~~~~~p~~~~~l~~~ 358 (408)
+ +..| +...|....+.+++..+++.+.+.+.+.
T Consensus 354 d~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~ 393 (473)
T PRK10429 354 DYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGL 393 (473)
T ss_pred hhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 5444 5666888888899999998888776643
No 106
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.40 E-value=4e-10 Score=101.44 Aligned_cols=307 Identities=20% Similarity=0.164 Sum_probs=190.9
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcchhh-hHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVF-FSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 79 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~~~~-~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 79 (408)
|.|-++.+.++.++..++.++-... +...++.+-.+.|.|++...+. ..++-|.+|+ +-|.+++.|.....+|..++
T Consensus 73 ~~g~er~l~~~Llli~~G~~iR~~~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk-~~~~mtglYs~sl~~~aaLa 150 (395)
T COG2807 73 RFGEERSLFLALLLIAAGILIRSLG-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPK-RVGLMTGLYSTSLGAGAALA 150 (395)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhccc-chhhHHhHHHHHHHHHHHHH
Confidence 3566788888888888888877666 7788999999999999986554 5577788876 55789999999999999999
Q ss_pred HHHHhHhcccc-chHHHHHHhhHHHHHHHHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCCCCCCCccCCCCCCcc
Q 015377 80 AALAWIVMPIL-TWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLD 158 (408)
Q Consensus 80 ~~l~~~~~~~~-~Wr~~f~i~~i~~~~~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (408)
+.++..+..+. +||....+=++|+++.++.++ |...|. +. ++
T Consensus 151 a~lavpla~~~~gW~~aL~~WAl~allAl~~Wl--Pq~~r~-----~~------------------~~------------ 193 (395)
T COG2807 151 AALAVPLAQHSGGWRGALGFWALLALLALLIWL--PQALRE-----QA------------------AS------------ 193 (395)
T ss_pred hhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHh--hhcccc-----cc------------------cc------------
Confidence 98887776555 799999888888877666554 332221 00 00
Q ss_pred cccCCCCCccccccccccccccccccchhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccccc
Q 015377 159 EEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSE 238 (408)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 238 (408)
. .. +.+. +.+.+.++.-|+ +.+.+..+...||...-|.|.+..+.+...
T Consensus 194 ~------~~---------~~~~-----~~~vw~~~~aW~----vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa------- 242 (395)
T COG2807 194 I------AT---------KLVS-----VRKVWRSPLAWQ----VTLFMGLQSLLYYIVIGWLPAILIDRGLSA------- 242 (395)
T ss_pred c------cc---------cccc-----ccccccCchhHH----HHHHHHhhHHHHHHHHHHHHHHHHHcCCCH-------
Confidence 0 00 0000 000111222222 233344577889999999998865443211
Q ss_pred CccchhHHHHHHHHHhhhhHHHHHHHHHHhhh-chHHHHHHHHHHHHHHHHHHHh-hhhhHHHHHHHHHHHHHhhhhhhh
Q 015377 239 NVQDASVYINVFITSFAELPGLLTAALLVDRV-GRKLSMTIMFIFVCIFLLPLVT-LQSNILLTALLSGARMFSMGTFII 316 (408)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~-grR~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 316 (408)
.......-+..+.+++.++....+.+|. ++|+..+.......+-...+.+ ..+...... ++..+...+.++.
T Consensus 243 ----~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw~--~llG~G~G~~F~l 316 (395)
T COG2807 243 ----AEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILWA--LLLGLGQGGAFPL 316 (395)
T ss_pred ----HHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHHH--HHHhCccchHHHH
Confidence 1112233455677889999999999975 6666655544433332322222 222222221 2222222344555
Q ss_pred hhhhcccccC-CchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhh-HHHHHHHHHHHHHHHHHhcc
Q 015377 317 ANIFAPEIYP-TSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTA-AILLLEALIVLSVVVILLIP 383 (408)
Q Consensus 317 ~~~~~~el~p-~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~-~~~~~~~~~~i~~~~~~~~~ 383 (408)
.-.....-.+ .+.-+.=.|+...+|++-+.++|.+++.+.|..+++. +...+..+.+...+..+...
T Consensus 317 aL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a~ 385 (395)
T COG2807 317 ALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLRAG 385 (395)
T ss_pred HHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhhcc
Confidence 5444444443 3555667788888999999999999999999877543 44455555555555555443
No 107
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.38 E-value=2.8e-12 Score=126.16 Aligned_cols=136 Identities=17% Similarity=0.009 Sum_probs=98.9
Q ss_pred CCcchhHHHHHHHHHHHHHHH---HhhhhhHHHHHHHHHHhhccCCcch-hhhHHHhhhcCCCcchhHHHH-HHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLL---SAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVV-FSTFWTFG 75 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~R~l~Gi~~g~~~-~~~~~~~E~~p~~~Rg~~~~~-~~~~~~~G 75 (408)
+.|||+.+..+.+...+.... ...+++...++++|++.|++.+... ....+..|.+|++.||...++ ++.+...|
T Consensus 312 r~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g 391 (490)
T PRK10642 312 RFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVA 391 (490)
T ss_pred HhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHH
Confidence 469999988877654433322 2334567888899999998766542 345567899999999998886 56655544
Q ss_pred HHHHHHHHhHhcc-ccchHHHHHHhhHHHHHHHHHHHhccCcchhHhhc-----CChhhHHHHHHHHH
Q 015377 76 SVSEAALAWIVMP-ILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTK-----GRITDAHNILDKIA 137 (408)
Q Consensus 76 ~~l~~~l~~~~~~-~~~Wr~~f~i~~i~~~~~~~~~~~lpESp~~l~~~-----~~~~~a~~~l~~~~ 137 (408)
.+++.+...+.+ ..+|+.++++..+++++..+..+++||||+|+.++ ||.|||++.++|++
T Consensus 392 -~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~pes~~~~~~~~~~~~~~~~~a~~~l~~~~ 458 (490)
T PRK10642 392 -GLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTMKETANRPLKGATPAASDIQEAKEILVEHY 458 (490)
T ss_pred -HHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccCCCCCCccccccchhhHHHHhhccc
Confidence 455555444433 34688888877777777767777789999999865 99999999999886
No 108
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.38 E-value=6.3e-10 Score=102.37 Aligned_cols=321 Identities=17% Similarity=0.172 Sum_probs=184.1
Q ss_pred chhHHHHHHHHHHHHHHHHhhhhh---HHHHHHHHHHhhccCCcchhh-hHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015377 4 GRMSILGGALVTFVAGLLSAFSPN---YISLLILRGLAGAGLGSGHVF-FSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 79 (408)
Q Consensus 4 Rr~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~R~l~Gi~~g~~~~~-~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 79 (408)
||+.+-+..++..+++++..++++ +...++.-.+..++.....+. .+++.+..++++-|+..+.-...-.+|+++.
T Consensus 88 Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i~ 167 (438)
T COG2270 88 RKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDNMGRISGLGWALGYLGSVIL 167 (438)
T ss_pred cchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccccCcccccccccccccchHH
Confidence 566666777777778887777766 344555556777777665544 4678889999888887665433444454433
Q ss_pred HHHHhH--h-c---------------cccchHHHHHHhhHHHHHH-HHHHHhccCcchhHhhcCCh-hhHHHHHHHHHHH
Q 015377 80 AALAWI--V-M---------------PILTWRWLLALSAIPAFVL-LIFIVFMPESPRYLCTKGRI-TDAHNILDKIAQF 139 (408)
Q Consensus 80 ~~l~~~--~-~---------------~~~~Wr~~f~i~~i~~~~~-~~~~~~lpESp~~l~~~~~~-~~a~~~l~~~~~~ 139 (408)
-...+. + . +...=|..+.+.++.-+++ ++++++.||-++- +... +--++..+++.
T Consensus 168 li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~~~v~~~~~~---~~~~~~~l~~g~k~L~-- 242 (438)
T COG2270 168 LIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMILNVHDAEKI---SSPPPTALRNGFKELK-- 242 (438)
T ss_pred HHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHHhcccccccc---cccchHHHHHHHHHHH--
Confidence 322211 1 1 2235788888888866555 4556666655430 0000 00001111111
Q ss_pred cCCCCCCCCccCCCCCCcccccCCCCCccccccccccccccccccchhhhccchhhHHHHHHHHHHHH--HHHHHHHHHH
Q 015377 140 NQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYF--GNSFVYYGIV 217 (408)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 217 (408)
.++++.+..+....+++..+.+. .+.+.-.+..
T Consensus 243 ---------------------------------------------~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~ 277 (438)
T COG2270 243 ---------------------------------------------STFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGV 277 (438)
T ss_pred ---------------------------------------------HHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHH
Confidence 01122222222222222222221 1222222221
Q ss_pred HHHHhhhccCCCCCcccccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhH
Q 015377 218 LLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNI 297 (408)
Q Consensus 218 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~ 297 (408)
+-...+ +.++.++........+.+++|+++.+++.||+|-|+++..+.++..+..+...+...+.
T Consensus 278 fg~~~~---------------gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~ 342 (438)
T COG2270 278 FGAADL---------------GLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGEL 342 (438)
T ss_pred HHHHHc---------------CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccH
Confidence 111111 23345667777788899999999999999999999888877666555443333333333
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchh-hHHHHHHHHHHHHH
Q 015377 298 LLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQT-AAILLLEALIVLSV 376 (408)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~-~~~~~~~~~~~i~~ 376 (408)
....+-.....+..+..+..-.|.+++.|.+.-+..+|+-+..|+.+++.+|+.+..+.+.++.. ..+..+..+.+++.
T Consensus 343 ~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl 422 (438)
T COG2270 343 DFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGL 422 (438)
T ss_pred HHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhH
Confidence 33223222222334567888999999999999999999999999999999999998777766543 33444445545554
Q ss_pred HHHHhcccccCCcc
Q 015377 377 VVILLIPFETKGKE 390 (408)
Q Consensus 377 ~~~~~~~~et~~~~ 390 (408)
..+...|+.+.++
T Consensus 423 -~~L~~v~~~~~~~ 435 (438)
T COG2270 423 -LLLLRVKVPGRRE 435 (438)
T ss_pred -hhEEeecCCCCcc
Confidence 4455555554443
No 109
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.28 E-value=8.9e-10 Score=107.95 Aligned_cols=183 Identities=12% Similarity=0.174 Sum_probs=108.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhch
Q 015377 193 PRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGR 272 (408)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gr 272 (408)
+++++.....|..++......+....+.+.+..+.+ ..............++..++.++.|+++||+||
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g-----------ls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~ 100 (476)
T PLN00028 32 RPHMRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLN-----------LTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGP 100 (476)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 344555555666665555555555544454443221 111122222333446677899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHH
Q 015377 273 KLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVA 352 (408)
Q Consensus 273 R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~ 352 (408)
|+.+..+.+..++..+......+........+...+.. +.......+.+|.+|.+.|+++.|+.+..+.+|+.+++.+.
T Consensus 101 r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~-~~~~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~ 179 (476)
T PLN00028 101 RYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFSL-ATFVSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLM 179 (476)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH-HhhHHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHH
Confidence 99888776666555444433333222222112222221 22223344678999999999999999988888877776665
Q ss_pred HHHhh----h-----cchhhHHHHHHHHHHHHHHHHHhcccccC
Q 015377 353 VGLVT----S-----CHQTAAILLLEALIVLSVVVILLIPFETK 387 (408)
Q Consensus 353 ~~l~~----~-----~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 387 (408)
+.+.. . .++...+.+.++++++..+..+++++|..
T Consensus 180 ~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p 223 (476)
T PLN00028 180 PLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDLP 223 (476)
T ss_pred HHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCC
Confidence 53321 1 24556778888877777777677665543
No 110
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.27 E-value=2e-08 Score=95.45 Aligned_cols=137 Identities=16% Similarity=0.209 Sum_probs=86.2
Q ss_pred HHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh-hhhHHHHHHHHH----HHHHhhhhhhhhhhhcccc
Q 015377 250 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL-QSNILLTALLSG----ARMFSMGTFIIANIFAPEI 324 (408)
Q Consensus 250 ~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~el 324 (408)
.+..+.+++-....+++.+|+|-|++++.+.+...+=....... ++.......... -.......+.....|..|.
T Consensus 250 ~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~ 329 (400)
T PF03825_consen 250 ALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRI 329 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHh
Confidence 45567889999999999999999999888776655422222222 222222221111 0111112235566788999
Q ss_pred cCCchhhHHHhHHHHhh-hHhHhhHHHHHHHHhhhcchh------hHHHHHHHHHHHHHHHHHhccccc
Q 015377 325 YPTSMRSTGAGVAYAVG-RIGGMVCPLVAVGLVTSCHQT------AAILLLEALIVLSVVVILLIPFET 386 (408)
Q Consensus 325 ~p~~~R~~a~gi~~~~~-~~~~~~~p~~~~~l~~~~~~~------~~~~~~~~~~~i~~~~~~~~~~et 386 (408)
.|.+.|+++.|+-++.. .+|+.++.++.+.+.+..+.. ..+.+.+++.++..++..++-+|+
T Consensus 330 ~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 330 APPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred CCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 99999999999988875 488999999988888765432 223444454444444444444443
No 111
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.27 E-value=5.9e-09 Score=98.81 Aligned_cols=333 Identities=17% Similarity=0.147 Sum_probs=177.4
Q ss_pred CCcchhH-HHHHHHHHHHHHHHHhhhhh------HHHHHHHHHHhhccCCcchhh-hHHHhhhcCC-CcchhHHHHHHHH
Q 015377 1 MEEGRMS-ILGGALVTFVAGLLSAFSPN------YISLLILRGLAGAGLGSGHVF-FSWFMEFVPP-SNRGKWMVVFSTF 71 (408)
Q Consensus 1 ~~gRr~~-~~~~~~~~~~~~~~~~~~~~------~~~l~~~R~l~Gi~~g~~~~~-~~~~~E~~p~-~~Rg~~~~~~~~~ 71 (408)
|.||||- ++.+.....+...++-.+++ .....+.-.+.|++.-...+. .++..|.++. +||.+..++-+.+
T Consensus 78 r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~ 157 (467)
T COG2211 78 RWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVF 157 (467)
T ss_pred ccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHH
Confidence 5788776 55555777788887777764 334555566666655432222 2345677665 7899999999999
Q ss_pred HHHHHHHHHHHHhHh----cc---ccchHHHHHHhhHHHHHHHHHHH-hccCcchhHhhcCChhhHHHHHHHHHHHcCCC
Q 015377 72 WTFGSVSEAALAWIV----MP---ILTWRWLLALSAIPAFVLLIFIV-FMPESPRYLCTKGRITDAHNILDKIAQFNQTS 143 (408)
Q Consensus 72 ~~~G~~l~~~l~~~~----~~---~~~Wr~~f~i~~i~~~~~~~~~~-~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~ 143 (408)
..+|.++...+...+ .+ ..|||..-++.++.+++..+..+ ...|.+. ++.
T Consensus 158 ~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~---------~~~------------- 215 (467)
T COG2211 158 ASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVV---------ETQ------------- 215 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccC---------ccc-------------
Confidence 988877766554332 22 34899988888887766654433 3333211 000
Q ss_pred CCCCCccCCCCCCcccccCCCCCcccccccccccccccccc-chhhhccchhhHHHHHHHHHHHH-HHHHHHHHHHHHHH
Q 015377 144 LPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGF-SSFLMLFSPRFFKTTILLWVLYF-GNSFVYYGIVLLAS 221 (408)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 221 (408)
. .++ ..+.++ ..+..+++.+-++..+++.+..+ +.++.--...++..
T Consensus 216 -----~--------------~~~------------~~~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~ 264 (467)
T COG2211 216 -----P--------------TKT------------GVKLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVT 264 (467)
T ss_pred -----c--------------Ccc------------cccccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEE
Confidence 0 000 000000 01222333222222222211111 11111111111111
Q ss_pred hhhccCCCCCcccccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhh--HHH
Q 015377 222 ELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSN--ILL 299 (408)
Q Consensus 222 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~--~~~ 299 (408)
.. .+..+...+..........+++.++...+.+|+|+|+++..+.++..+....+.+...+ ...
T Consensus 265 y~--------------lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~ 330 (467)
T COG2211 265 YV--------------LGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLI 330 (467)
T ss_pred EE--------------cCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHH
Confidence 10 11222333344445556667778999999999999999998877776655554443322 222
Q ss_pred HHHHHHHHHHhhhhhhhhhhhcccccC-----Cchh--hHHHhHHHHhhhHhHhhHHHHHHHHhhhcch-----------
Q 015377 300 TALLSGARMFSMGTFIIANIFAPEIYP-----TSMR--STGAGVAYAVGRIGGMVCPLVAVGLVTSCHQ----------- 361 (408)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~el~p-----~~~R--~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~----------- 361 (408)
.+............+++.|...+|+.. +..| +...|...++.++|..++..+.+..+...|.
T Consensus 331 ~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~Gyv~~~~~Q~~~a 410 (467)
T COG2211 331 VVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIGYVPNVSAQSASA 410 (467)
T ss_pred HHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcccCCHHH
Confidence 222233333444556788998886653 3344 6667888888899888888777765543321
Q ss_pred ----hhHHHHH-HHHHHHHHHHHHhcccccCCcccccccccccccc
Q 015377 362 ----TAAILLL-EALIVLSVVVILLIPFETKGKELVNTIDGVSNSK 402 (408)
Q Consensus 362 ----~~~~~~~-~~~~~i~~~~~~~~~~et~~~~~~~~~~~~~~~~ 402 (408)
...+.+. +++.+++++...+++ - .++.+++++++.++.|
T Consensus 411 l~gI~~~~~~~Pa~l~l~~~i~~~~y~-L-~~~~~~~I~~eL~~r~ 454 (467)
T COG2211 411 LFGIRFLFIILPALLLLLAAIIIFFYK-L-NEKMHKEIIEELEQRK 454 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc-C-CHHHHHHHHHHHHHHh
Confidence 1122222 334444444444442 2 2345566666666554
No 112
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.24 E-value=3e-10 Score=91.26 Aligned_cols=133 Identities=18% Similarity=0.186 Sum_probs=94.3
Q ss_pred hhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCchhhHH
Q 015377 254 FAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTG 333 (408)
Q Consensus 254 ~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R~~a 333 (408)
+..+++....+++.||.|||+.+..+.....+.........+............+......+..+.+..|.+|++.|+++
T Consensus 9 ~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (141)
T TIGR00880 9 LGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEERGVA 88 (141)
T ss_pred hHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhhhHH
Confidence 44566778899999999999998877666555444433333322222222222222233446677888999999999999
Q ss_pred HhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhccccc
Q 015377 334 AGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 386 (408)
Q Consensus 334 ~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et 386 (408)
.++.+....++..++|.+.+.+.+..+....+.+.+.+.+++.+..+++.||+
T Consensus 89 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (141)
T TIGR00880 89 LGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPET 141 (141)
T ss_pred HHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 99999999999999999888777655555667777777777777777777764
No 113
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.21 E-value=1.5e-09 Score=104.44 Aligned_cols=182 Identities=9% Similarity=0.004 Sum_probs=112.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHH
Q 015377 196 FKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLS 275 (408)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~ 275 (408)
++....+++.++.+.+.........+.+..+.+ .+............++..++.+..++++||+|||+.
T Consensus 7 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~-----------~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~ 75 (412)
T TIGR02332 7 RRLIIFLFILFIFSFLDRINIGFAGLTMGKDLG-----------LSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRW 75 (412)
T ss_pred hHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcC-----------CCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHH
Confidence 334444555555544444444444444432211 111222233334456667888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHH
Q 015377 276 MTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGL 355 (408)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l 355 (408)
+..+.++..+........++.......-+...+...+..+....+.+|.+|.+.|+++.|+.+....+|..++|.+.+.+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l 155 (412)
T TIGR02332 76 IAGIMVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYI 155 (412)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88877666655444444333222222222222222233455567789999999999999999999889999999887766
Q ss_pred hh------hcchhhHHHHHHHHHHHHHHHHHhcccccCC
Q 015377 356 VT------SCHQTAAILLLEALIVLSVVVILLIPFETKG 388 (408)
Q Consensus 356 ~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~ 388 (408)
.+ ..++...|.+.++..++..++.+++.||++.
T Consensus 156 ~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 156 LALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred HhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 53 2355667777777777666666777778763
No 114
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.20 E-value=8.8e-10 Score=111.81 Aligned_cols=137 Identities=15% Similarity=0.095 Sum_probs=90.1
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCc
Q 015377 249 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTS 328 (408)
Q Consensus 249 ~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~ 328 (408)
..+..++.++|.++.|+++||+|||+.++.+.++.++..+...+..+.......-++..++..+..+....+.+|.+|.+
T Consensus 208 ~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~ 287 (742)
T TIGR01299 208 GLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQE 287 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
Confidence 34445778899999999999999999998877666554444443333222222223333333445578899999999999
Q ss_pred hhhHHHhHHHHhhhHhHhhHHHHHHHHhhhc-------------chhhHHHHHHHHHHHHHHHHHhccccc
Q 015377 329 MRSTGAGVAYAVGRIGGMVCPLVAVGLVTSC-------------HQTAAILLLEALIVLSVVVILLIPFET 386 (408)
Q Consensus 329 ~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~-------------~~~~~~~~~~~~~~i~~~~~~~~~~et 386 (408)
.|+...++...+..+|+++++.+...+.... ++...+.+ +++..+..++..++.||+
T Consensus 288 ~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i-~~lp~ll~ll~~~~lPES 357 (742)
T TIGR01299 288 KRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIV-CAFPCVFAIGALTFMPES 357 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHH-HHHHHHHHHHHHHHcCCC
Confidence 9999999999998899888887655443221 12223333 333344444556666787
No 115
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.19 E-value=1.6e-09 Score=104.10 Aligned_cols=140 Identities=17% Similarity=0.134 Sum_probs=94.1
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCC
Q 015377 248 NVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPT 327 (408)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~ 327 (408)
......++.+++.++.++++||+|||+.+..+.++..+..+......+............+......+....+.+|.+|.
T Consensus 55 ~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~ 134 (406)
T PRK11551 55 AFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGP 134 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCH
Confidence 34445577788999999999999999999887666555444333333322222222222222223345667788999999
Q ss_pred chhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccC
Q 015377 328 SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 387 (408)
Q Consensus 328 ~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 387 (408)
+.|+++.++.+....+|+.++|.+...+.+..+....+.+.+++.++..+...++.||++
T Consensus 135 ~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 194 (406)
T PRK11551 135 RLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESR 194 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 999999999999988999999887765555555555666666666666555556566764
No 116
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.19 E-value=1.3e-09 Score=103.67 Aligned_cols=143 Identities=19% Similarity=0.138 Sum_probs=99.9
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccC
Q 015377 247 INVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYP 326 (408)
Q Consensus 247 ~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p 326 (408)
.......+...++.++.|.++||+|||+.+..+..+..+........++........+...+......+....+..|.+|
T Consensus 44 ~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~ 123 (385)
T TIGR00710 44 MTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYP 123 (385)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcC
Confidence 33444556778899999999999999999988766665554444333332222222222222222334556778899999
Q ss_pred CchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCCc
Q 015377 327 TSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGK 389 (408)
Q Consensus 327 ~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~~ 389 (408)
.+.|+++.|+.+....++..++|.+.+.+.+..+....+.+.+++.++..+...+..||++.+
T Consensus 124 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (385)
T TIGR00710 124 GEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETLPY 186 (385)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 999999999999999999999998888777666666667777777777766666667776554
No 117
>PRK09848 glucuronide transporter; Provisional
Probab=99.18 E-value=2.3e-08 Score=97.40 Aligned_cols=106 Identities=9% Similarity=0.014 Sum_probs=66.4
Q ss_pred HhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhh-hhH-HHHHHHHHHHHHhhhhhhhhhhhcccccCC---
Q 015377 253 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ-SNI-LLTALLSGARMFSMGTFIIANIFAPEIYPT--- 327 (408)
Q Consensus 253 ~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~el~p~--- 327 (408)
.+..+++..+.+++.||+|+|+.+..+..+..+....+.... ++. ..........+......+..+...+|..|.
T Consensus 274 ~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~ 353 (448)
T PRK09848 274 LVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEY 353 (448)
T ss_pred HHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHH
Confidence 345667888899999999999998887665544333332221 111 111111122222233345567777777764
Q ss_pred ----chhhHHHhHHHHhhhHhHhhHHHHHHHHhhh
Q 015377 328 ----SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS 358 (408)
Q Consensus 328 ----~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~ 358 (408)
+.++...|+.+...++|..+++.+.+.+.+.
T Consensus 354 ~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~ 388 (448)
T PRK09848 354 LTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGL 388 (448)
T ss_pred hhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3568889999999999999988887766543
No 118
>TIGR00895 2A0115 benzoate transport.
Probab=99.18 E-value=9.3e-10 Score=104.93 Aligned_cols=138 Identities=20% Similarity=0.143 Sum_probs=95.4
Q ss_pred HHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCch
Q 015377 250 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 329 (408)
Q Consensus 250 ~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~ 329 (408)
....+..+++.++.++++||+|||+.+..+..+..+.........+.........+..+......+....+.+|.+|.+.
T Consensus 59 ~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 138 (398)
T TIGR00895 59 SAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRF 138 (398)
T ss_pred HHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHh
Confidence 34456678889999999999999999988776665544443333332222222222222223344667888899999999
Q ss_pred hhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccC
Q 015377 330 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 387 (408)
Q Consensus 330 R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 387 (408)
|+++.|+......+|+.++|.+.+.+.+..+....+.+.+..+++..+....+.||+.
T Consensus 139 r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (398)
T TIGR00895 139 RGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESI 196 (398)
T ss_pred hchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCC
Confidence 9999999999999999999988887776656555666665566666566666666764
No 119
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.17 E-value=1.8e-09 Score=103.14 Aligned_cols=142 Identities=15% Similarity=0.079 Sum_probs=96.9
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCC
Q 015377 248 NVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPT 327 (408)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~ 327 (408)
......+...++.++.|+++||+|||+.+..+.....+.........+........+.............+.+..|.+|.
T Consensus 43 ~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~ 122 (392)
T PRK10473 43 AFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDD 122 (392)
T ss_pred HHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCH
Confidence 33344566677889999999999999999887666655444443333222221111222222222345667788999999
Q ss_pred chhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCCc
Q 015377 328 SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGK 389 (408)
Q Consensus 328 ~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~~ 389 (408)
+.|+++.++.+....+++.++|.+...+.+..++...+.+.+++.++..+..++..||++.+
T Consensus 123 ~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 184 (392)
T PRK10473 123 RRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETRPA 184 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCCCc
Confidence 99999999999999999999998877665555555667777777777777666666777544
No 120
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.17 E-value=4.2e-09 Score=100.69 Aligned_cols=138 Identities=12% Similarity=0.061 Sum_probs=95.4
Q ss_pred HHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCch
Q 015377 250 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 329 (408)
Q Consensus 250 ~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~ 329 (408)
....+...++.++.+.++||+|||+.+..+..+..+.........+.......-....+......+....+.+|.+|.+.
T Consensus 62 ~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~ 141 (394)
T PRK10213 62 TVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRT 141 (394)
T ss_pred HHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhH
Confidence 34456667788999999999999999988877766654444333332222222222222222334566777899999999
Q ss_pred hhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccC
Q 015377 330 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 387 (408)
Q Consensus 330 R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 387 (408)
|+.+.++......++..++|.+.+.+.+..++...+.+.+.+++++.+......||++
T Consensus 142 ~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~ 199 (394)
T PRK10213 142 VPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLP 199 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCC
Confidence 9999999999999999999999888777666666777766666665555555456754
No 121
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.16 E-value=1e-07 Score=92.55 Aligned_cols=105 Identities=16% Similarity=0.159 Sum_probs=77.6
Q ss_pred CC-cchhHHHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCC--cchhHHHHHHHHHHHH
Q 015377 1 ME-EGRMSILGGALVTFVAGLLSAFSP-NYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPS--NRGKWMVVFSTFWTFG 75 (408)
Q Consensus 1 ~~-gRr~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~--~Rg~~~~~~~~~~~~G 75 (408)
|. ||||+++++.++..++.++.+... +...+.++-.+.++|.|.. +...++++|.+|++ +|....++++....+|
T Consensus 71 RilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG 150 (493)
T PRK15462 71 KVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVG 150 (493)
T ss_pred HccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHH
Confidence 44 999999999999988877665543 2223333333344444543 33456789999986 6888899999999999
Q ss_pred HHHHHHHHhHhccccchHHHHHHhhHHHHH
Q 015377 76 SVSEAALAWIVMPILTWRWLLALSAIPAFV 105 (408)
Q Consensus 76 ~~l~~~l~~~~~~~~~Wr~~f~i~~i~~~~ 105 (408)
..++|.+...+.+..|||+.|.+.++..++
T Consensus 151 ~~iap~l~g~L~~~~Gw~~~F~iaaigm~l 180 (493)
T PRK15462 151 SIIAPIACGYAQEEYSWAMGFGLAAVGMIA 180 (493)
T ss_pred HHHHHHHHHHHHhhhChHHHHHHHHHHHHH
Confidence 999999999888888999999987664333
No 122
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.16 E-value=3.9e-10 Score=90.56 Aligned_cols=116 Identities=23% Similarity=0.323 Sum_probs=98.4
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 79 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 79 (408)
|.|||+.+..+..+..++.+...+.+++..+.+.+++.|++.+.. +....+..|..|+++|++..+..+....+|..++
T Consensus 24 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 103 (141)
T TIGR00880 24 RFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLG 103 (141)
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHh
Confidence 468999999999999988888888899999999999999988765 3456678899999999999999999999999999
Q ss_pred HHHHhHhccccchHHHHHHhhHHHHHHHH-HHHhccCc
Q 015377 80 AALAWIVMPILTWRWLLALSAIPAFVLLI-FIVFMPES 116 (408)
Q Consensus 80 ~~l~~~~~~~~~Wr~~f~i~~i~~~~~~~-~~~~lpES 116 (408)
+.+...+.+..+||+.+++.++..++..+ ..+..||+
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (141)
T TIGR00880 104 PPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPET 141 (141)
T ss_pred HHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 99988888888999999988776665543 44455653
No 123
>PRK10054 putative transporter; Provisional
Probab=99.15 E-value=3e-09 Score=101.77 Aligned_cols=137 Identities=12% Similarity=0.076 Sum_probs=91.6
Q ss_pred HHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCch
Q 015377 250 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 329 (408)
Q Consensus 250 ~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~ 329 (408)
....+..+++.+..|.++||+|||+.+..+.....+....+.+.++...................+....+.+|.+|.+.
T Consensus 50 s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 129 (395)
T PRK10054 50 TIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTS 129 (395)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhH
Confidence 34446677888999999999999998887766655544444333332222111111111111223456777889999999
Q ss_pred hhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccC
Q 015377 330 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 387 (408)
Q Consensus 330 R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 387 (408)
|+++.|+.+....+|..++|.+.+.+.+ .+....+.+.+++.+++.+...+..||++
T Consensus 130 ~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~ 186 (395)
T PRK10054 130 KTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSE 186 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999988886654 45566777777776776655555444543
No 124
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.15 E-value=4.7e-09 Score=98.36 Aligned_cols=142 Identities=18% Similarity=0.109 Sum_probs=97.7
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccC
Q 015377 247 INVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYP 326 (408)
Q Consensus 247 ~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p 326 (408)
.......+...++.+..|.++||+|||+.+..+.++.++......+..+........+...+......+....+..|.+|
T Consensus 36 ~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~ 115 (352)
T PF07690_consen 36 LLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFP 115 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhccccccccccccccccccccccch
Confidence 34444556778899999999999999998888777766653332332332322222223333333445677888999999
Q ss_pred CchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCC
Q 015377 327 TSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKG 388 (408)
Q Consensus 327 ~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~ 388 (408)
.+.|+++.|+.+....+|..++|.+.+.+.+..+....+.+.++++++..++..++.++++.
T Consensus 116 ~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~ 177 (352)
T PF07690_consen 116 PEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEPPP 177 (352)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---ST
T ss_pred hhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhccc
Confidence 99999999999999999999999988877655566677888888888777654455544443
No 125
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.14 E-value=4.1e-09 Score=102.17 Aligned_cols=139 Identities=12% Similarity=0.073 Sum_probs=95.4
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCC
Q 015377 248 NVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPT 327 (408)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~ 327 (408)
......+...++.++.|+++||+|||+.+..+.++.++.........+............+.....++....+.+|.+|.
T Consensus 63 ~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~ 142 (434)
T PRK11663 63 LATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSR 142 (434)
T ss_pred HHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCH
Confidence 33445567788999999999999999999888777766555444433322222211122222222345567788999999
Q ss_pred chhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhccccc
Q 015377 328 SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 386 (408)
Q Consensus 328 ~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et 386 (408)
+.|+++.|+.+..+.+|+.++|.+.+.+.+..++...+.+.++++++..+...+..||+
T Consensus 143 ~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~ 201 (434)
T PRK11663 143 TERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDK 201 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999998888777766666677777766655544444444554
No 126
>PRK10504 putative transporter; Provisional
Probab=99.14 E-value=5.6e-09 Score=102.32 Aligned_cols=180 Identities=11% Similarity=0.014 Sum_probs=111.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHH
Q 015377 197 KTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSM 276 (408)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~ 276 (408)
+..+.++..++...+..+....+.|.+..+.+ .+............+...++.++.++++||+|||+.+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g-----------~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~ 78 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQSLG-----------ESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIF 78 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhC-----------cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHH
Confidence 34444555555555555555555555543211 1111212222333456677889999999999999998
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHh
Q 015377 277 TIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLV 356 (408)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~ 356 (408)
+.+..+.++.........+............+......+....+..|.+|.+.|+++.|+.+..+.+|..++|.+.+.+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~ 158 (471)
T PRK10504 79 FTAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLV 158 (471)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 87665555444333333322222222222222222334566777889999999999999999999999999999888777
Q ss_pred hhcchhhHHHHHHHHHHHHHHHHHhcccccC
Q 015377 357 TSCHQTAAILLLEALIVLSVVVILLIPFETK 387 (408)
Q Consensus 357 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 387 (408)
+..++...|.+...++.++.+......|+.+
T Consensus 159 ~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~ 189 (471)
T PRK10504 159 EYASWHWIFLINIPVGIIGAIATLMLMPNYT 189 (471)
T ss_pred hhccHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 7666566676666666666666666655554
No 127
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.14 E-value=3.5e-09 Score=102.61 Aligned_cols=168 Identities=17% Similarity=0.208 Sum_probs=101.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhh-chHHHHHHH
Q 015377 201 LLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRV-GRKLSMTIM 279 (408)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~-grR~~~~~~ 279 (408)
.+....+...+.+|+...+.+...... .+.+................++.+++|+++||+ |||+.++.+
T Consensus 13 ~l~~~~~~e~fs~Yg~~~~L~~yL~~~----------lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG 82 (493)
T PRK15462 13 YVVALQIWEYFSFYGMRALLILYLTNQ----------LKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLG 82 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh----------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHH
Confidence 344444556677887776655443211 011111222222333355567889999999999 999998887
Q ss_pred HHHHHHHHHHHHhhh-hhHHHHHHHHHHHHHhhhh-hhhhhhhcccccCCc--hhhHHHhHHHHhhhHhHhhHHHHHHHH
Q 015377 280 FIFVCIFLLPLVTLQ-SNILLTALLSGARMFSMGT-FIIANIFAPEIYPTS--MRSTGAGVAYAVGRIGGMVCPLVAVGL 355 (408)
Q Consensus 280 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~el~p~~--~R~~a~gi~~~~~~~~~~~~p~~~~~l 355 (408)
.++..+....+.... +........... ....+. .+....+.+|+||++ .|.++.++.++.+++|+.++|.+.+.+
T Consensus 83 ~il~~lg~lll~~~~~~~~~~~l~l~li-~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L 161 (493)
T PRK15462 83 ALLMAIGHVVLGASEIHPSFLYLSLAII-VCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYA 161 (493)
T ss_pred HHHHHHHHHHHHHhhcchhHHHHHHHHH-HHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHH
Confidence 766555433332211 111111111111 111222 244567789999986 799999999999999999999999988
Q ss_pred hhhcchhhHHHHHHHHHHHHHHHH
Q 015377 356 VTSCHQTAAILLLEALIVLSVVVI 379 (408)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~i~~~~~ 379 (408)
.+..+.+..|.+.++..+++.+..
T Consensus 162 ~~~~Gw~~~F~iaaigm~l~li~~ 185 (493)
T PRK15462 162 QEEYSWAMGFGLAAVGMIAGLVIF 185 (493)
T ss_pred HhhhChHHHHHHHHHHHHHHHHHH
Confidence 776666666766555544544443
No 128
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.12 E-value=1.9e-09 Score=102.46 Aligned_cols=141 Identities=14% Similarity=0.127 Sum_probs=99.2
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCC
Q 015377 248 NVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPT 327 (408)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~ 327 (408)
...+..+...++.++.|+++||+|||+.+..+.++.++.........+............+......+....+.+|.+|+
T Consensus 34 ~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~ 113 (399)
T TIGR00893 34 VFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLGAAEAPFFPGIILIVASWFPA 113 (399)
T ss_pred HHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCH
Confidence 33445567788899999999999999998877666555444433333322222222222222233445667888999999
Q ss_pred chhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCC
Q 015377 328 SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKG 388 (408)
Q Consensus 328 ~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~ 388 (408)
+.|+++.++......+|..++|.+.+.+.+..+....+.+.+++.++..+..++..||++.
T Consensus 114 ~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (399)
T TIGR00893 114 SERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQ 174 (399)
T ss_pred HHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCCCC
Confidence 9999999999999999999999888877766666667777777777776666666666544
No 129
>PRK03699 putative transporter; Provisional
Probab=99.12 E-value=1.3e-08 Score=97.46 Aligned_cols=131 Identities=15% Similarity=0.146 Sum_probs=86.4
Q ss_pred HHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCch
Q 015377 250 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 329 (408)
Q Consensus 250 ~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~ 329 (408)
....++..++.++.+++.||+|||+.+..+..+..+.........+........+...++.....+....+.+|.+|.+.
T Consensus 49 s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~ 128 (394)
T PRK03699 49 TFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQ 128 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccch
Confidence 34456778899999999999999999887766655544444433332222222222222222233455677889999999
Q ss_pred hhHHHhHHHHhhhHhHhhHHHHHHHHhhh-cchhhHHHHHHHHHHHHHHHHH
Q 015377 330 RSTGAGVAYAVGRIGGMVCPLVAVGLVTS-CHQTAAILLLEALIVLSVVVIL 380 (408)
Q Consensus 330 R~~a~gi~~~~~~~~~~~~p~~~~~l~~~-~~~~~~~~~~~~~~~i~~~~~~ 380 (408)
|+.+.+..+....+++.++|.+.+.+... .++...+.+.+++.++..+...
T Consensus 129 r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~ 180 (394)
T PRK03699 129 RGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTL 180 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888888888888887766543 3555667666766655544433
No 130
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.11 E-value=7.1e-09 Score=99.57 Aligned_cols=139 Identities=19% Similarity=0.078 Sum_probs=95.0
Q ss_pred HHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCch
Q 015377 250 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 329 (408)
Q Consensus 250 ~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~ 329 (408)
....+...++.++.|.++||+|||+.+..+.....+.........+........+..........+..+.+..|.+|.+.
T Consensus 55 ~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~ 134 (406)
T PRK15402 55 TAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEAD 134 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhH
Confidence 34456677888999999999999999888766665554444333332222222222122112223456677789999999
Q ss_pred hhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCC
Q 015377 330 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKG 388 (408)
Q Consensus 330 R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~ 388 (408)
|..+.++......++..++|.+.+.+.+..++...+.+.+++++++.+..++..||++.
T Consensus 135 ~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (406)
T PRK15402 135 AIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAG 193 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCc
Confidence 99999999888888888999888777665566667777777777776666666777754
No 131
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.11 E-value=1.2e-07 Score=89.08 Aligned_cols=144 Identities=11% Similarity=0.085 Sum_probs=94.4
Q ss_pred HHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCch
Q 015377 250 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 329 (408)
Q Consensus 250 ~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~ 329 (408)
.+..+.+++...+..++.+|+|.|+.++++..+.++=.+......+.+.....-..-..-.-.......-|.++.+|++.
T Consensus 266 s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rl 345 (412)
T PF01306_consen 266 SVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRL 345 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGG
T ss_pred HHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhH
Confidence 34456788899999999999999999988766655544444444443332211111100001112334557899999999
Q ss_pred hhHHHhHHHHhh-hHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCCccccc
Q 015377 330 RSTGAGVAYAVG-RIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGKELVN 393 (408)
Q Consensus 330 R~~a~gi~~~~~-~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~~~~~~ 393 (408)
.++...+...+. .++.++.+.+.+.+.|..|....|.+++++.++..++..+..++.+.....+
T Consensus 346 sAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~~~~~~ 410 (412)
T PF01306_consen 346 SATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKKQIVHP 410 (412)
T ss_dssp HHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSSTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCcccccC
Confidence 999999987664 4788888888899999887767888999888877778787776666554443
No 132
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.11 E-value=8.3e-09 Score=99.71 Aligned_cols=119 Identities=18% Similarity=0.133 Sum_probs=82.3
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCc
Q 015377 249 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTS 328 (408)
Q Consensus 249 ~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~ 328 (408)
..+..+...++.++.|+++||+|||+.+..+.++.++.........+.......-+...+...+.++....+..|.+|.+
T Consensus 59 ~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~ 138 (426)
T PRK12307 59 ATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKH 138 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHh
Confidence 33445677889999999999999999998887776665544443333222222222222222234556677889999999
Q ss_pred hhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHH
Q 015377 329 MRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILL 367 (408)
Q Consensus 329 ~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~ 367 (408)
.|+++.|+......+|.+++|.+.+.+.+..++...+.+
T Consensus 139 ~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i 177 (426)
T PRK12307 139 LKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFV 177 (426)
T ss_pred HhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHH
Confidence 999999999988889999998887766665555455544
No 133
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.10 E-value=8.4e-09 Score=98.69 Aligned_cols=181 Identities=15% Similarity=0.170 Sum_probs=106.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHH
Q 015377 195 FFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKL 274 (408)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~ 274 (408)
.++.....++.++...+..+......+.+..+.+ .+.........+..+...++.++.|+++||+|||+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----------~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~ 78 (405)
T TIGR00891 10 QWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFG-----------LTTVDAASLISAALISRWFGALMFGLWGDRYGRRL 78 (405)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----------CChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 3444445555555555555555555555432221 11122223333445677888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHH
Q 015377 275 SMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVG 354 (408)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~ 354 (408)
.+..+.++..+..+......+........+..........+....+..|.+|.+.|+++.++.+....+|.+++|.+.+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~ 158 (405)
T TIGR00891 79 PMVTSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSL 158 (405)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99887666555444433333222222222222222223345567778899999999999999999999999999988776
Q ss_pred Hhhhcc--hhhHHHHHHHHHHHHHHHHHhcccccC
Q 015377 355 LVTSCH--QTAAILLLEALIVLSVVVILLIPFETK 387 (408)
Q Consensus 355 l~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~et~ 387 (408)
+.+..+ +...+.+.+...++. +......||++
T Consensus 159 l~~~~~~~w~~~f~~~~~~~~~~-~~~~~~~~~~~ 192 (405)
T TIGR00891 159 VVPVWGDGWRALFFISILPIIFA-LWLRKNIPEAE 192 (405)
T ss_pred HHHhcCccHHHHHHHHHHHHHHH-HHHHHhCCCCh
Confidence 665443 334444433333333 33344456654
No 134
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.09 E-value=9e-09 Score=99.03 Aligned_cols=138 Identities=12% Similarity=0.050 Sum_probs=95.8
Q ss_pred HHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCchh
Q 015377 251 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 330 (408)
Q Consensus 251 ~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R 330 (408)
+..++..++.+..|.++||+|||+.+..+.++..+..+.....++.......-+...+......+..+.+..|.+|.+.|
T Consensus 59 ~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~ 138 (413)
T PRK15403 59 LYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKG 138 (413)
T ss_pred HHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 33466677889999999999999999887766655544444333322222222222222112234456778899999999
Q ss_pred hHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCC
Q 015377 331 STGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKG 388 (408)
Q Consensus 331 ~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~ 388 (408)
+++.++.+....++..++|.+.+.+.+..++...|.+.+++.+++.+...+..||++.
T Consensus 139 ~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~ 196 (413)
T PRK15403 139 IKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVK 196 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 9999999999999999999887777666566677888787777776665666678754
No 135
>PRK03545 putative arabinose transporter; Provisional
Probab=99.08 E-value=1e-08 Score=97.91 Aligned_cols=137 Identities=9% Similarity=0.026 Sum_probs=93.2
Q ss_pred HHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCchh
Q 015377 251 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 330 (408)
Q Consensus 251 ~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R 330 (408)
...+...++.+..+.++||+|||+++..+....++........++.......-...........+....+.+|.+|.+.|
T Consensus 52 ~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r 131 (390)
T PRK03545 52 IYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKK 131 (390)
T ss_pred HHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhh
Confidence 33455567778889999999999999888776665544444333322222211222222222234556777899999999
Q ss_pred hHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccC
Q 015377 331 STGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 387 (408)
Q Consensus 331 ~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 387 (408)
+++.|+......+|..++|.+.+.+.+..++...+.+.++++++..+......||.+
T Consensus 132 ~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~ 188 (390)
T PRK03545 132 AQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLP 188 (390)
T ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999999999899999999988877766666667788877777766666555555543
No 136
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.08 E-value=4.8e-09 Score=103.16 Aligned_cols=140 Identities=14% Similarity=0.044 Sum_probs=98.5
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCc
Q 015377 249 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTS 328 (408)
Q Consensus 249 ~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~ 328 (408)
.....+...++.++.++++||+|||+.++.+..+..+.........+............+......+....+..|.+|++
T Consensus 43 ~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~ 122 (485)
T TIGR00711 43 ITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPE 122 (485)
T ss_pred HHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHH
Confidence 34445777888999999999999999998877766655444443333222222222222222334466778889999999
Q ss_pred hhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCC
Q 015377 329 MRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKG 388 (408)
Q Consensus 329 ~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~ 388 (408)
.|+++.++......+|..++|.+.+.+.+..++...+.+.+...++..+...++.||++.
T Consensus 123 ~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~ 182 (485)
T TIGR00711 123 KRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKP 182 (485)
T ss_pred HHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCccc
Confidence 999999999999999999999988877776666666776666666666666666666543
No 137
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.08 E-value=1.5e-08 Score=100.08 Aligned_cols=164 Identities=19% Similarity=0.197 Sum_probs=102.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhch
Q 015377 193 PRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGR 272 (408)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gr 272 (408)
+++++....++..++.+.+.+.......+.+....+ ..............++..++.++.++++||+||
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-----------~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~ 84 (496)
T PRK03893 16 RAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFG-----------LTTVQAASLISAAFISRWFGGLLLGAMGDRYGR 84 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 445555555666666666666555555555532211 111122223334456677889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHH
Q 015377 273 KLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVA 352 (408)
Q Consensus 273 R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~ 352 (408)
|+.+..+.++.++.........+........+...+...+.++....+..|.+|.+.|+.+.++.+....+|+.++|.+.
T Consensus 85 r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 164 (496)
T PRK03893 85 RLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVY 164 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988877666554444433333222222222222222334456677889999999999999999999999999999988
Q ss_pred HHHhhhcchhhHHHH
Q 015377 353 VGLVTSCHQTAAILL 367 (408)
Q Consensus 353 ~~l~~~~~~~~~~~~ 367 (408)
+.+.+..++...+.+
T Consensus 165 ~~l~~~~~w~~~f~~ 179 (496)
T PRK03893 165 SLVVPVWGWRALFFI 179 (496)
T ss_pred HHHhccCCHHHHHHH
Confidence 877665554444443
No 138
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.07 E-value=1.8e-08 Score=94.81 Aligned_cols=136 Identities=14% Similarity=0.054 Sum_probs=90.7
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhh-----hhHHHHHHHHHHHHHhhhhhhhhhhhc
Q 015377 247 INVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ-----SNILLTALLSGARMFSMGTFIIANIFA 321 (408)
Q Consensus 247 ~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (408)
....+..+...++.++.|+++||+|||+.++.+..+..+......... +............+......+....+.
T Consensus 38 ~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~ 117 (365)
T TIGR00900 38 LAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAML 117 (365)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444567778889999999999999999887665544333322222 222222222222222223345667888
Q ss_pred ccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhc
Q 015377 322 PEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLI 382 (408)
Q Consensus 322 ~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 382 (408)
+|.+|.+.|+++.|+.+....+|.+++|.+.+.+.+..+....+.+.++..+++.+....+
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 178 (365)
T TIGR00900 118 PDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSV 178 (365)
T ss_pred HhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999888877766665566666565555555444444
No 139
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.04 E-value=2.4e-09 Score=101.29 Aligned_cols=140 Identities=16% Similarity=0.126 Sum_probs=93.9
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCC
Q 015377 248 NVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPT 327 (408)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~ 327 (408)
...+..+...++.++.|+++||+|||+.+..+.++..+..+......+............+......+....+.+|.+|.
T Consensus 35 ~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 114 (379)
T TIGR00881 35 LLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSR 114 (379)
T ss_pred HHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCH
Confidence 33444567778899999999999999999887776665554444433322222222222222233346667788999999
Q ss_pred chhhHHHhHHHHhhhHhHhhHH-HHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccC
Q 015377 328 SMRSTGAGVAYAVGRIGGMVCP-LVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 387 (408)
Q Consensus 328 ~~R~~a~gi~~~~~~~~~~~~p-~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 387 (408)
+.|+++.++.+....+|+.++| .+...+.+..+....+.+.+++.++..+...++.||++
T Consensus 115 ~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (379)
T TIGR00881 115 SERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRDSP 175 (379)
T ss_pred hhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeCCCc
Confidence 9999999999999999999998 44444444445556666667666666566666655643
No 140
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.03 E-value=9.5e-09 Score=97.56 Aligned_cols=139 Identities=14% Similarity=0.093 Sum_probs=97.6
Q ss_pred HHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCch
Q 015377 250 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 329 (408)
Q Consensus 250 ~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~ 329 (408)
....+...++.++.+.++||+|||+.+..+.....+.........+........+...++.....+....+.+|.+|.+.
T Consensus 33 ~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~ 112 (377)
T PRK11102 33 SAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEE 112 (377)
T ss_pred HHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH
Confidence 34456677889999999999999999988776666554444433332222222222222222333556778899999999
Q ss_pred hhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCC
Q 015377 330 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKG 388 (408)
Q Consensus 330 R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~ 388 (408)
|+++.++.+....+|..++|.+.+.+.+..+....+.+.+.++++..+...+..||++.
T Consensus 113 ~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (377)
T PRK11102 113 FSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPETLP 171 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCccCc
Confidence 99999999999999999999888877766566667777777777776666666667643
No 141
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.02 E-value=3.9e-08 Score=96.98 Aligned_cols=136 Identities=17% Similarity=0.062 Sum_probs=92.0
Q ss_pred HhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhccccc-CCchhh
Q 015377 253 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIY-PTSMRS 331 (408)
Q Consensus 253 ~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~-p~~~R~ 331 (408)
.+....+.+..|+++||+|||+.+..+..+..+..+.....++.......-....+...+..+.......+.+ |.+.|+
T Consensus 51 ~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~ 130 (495)
T PRK14995 51 SLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRN 130 (495)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 4455567788999999999999998887776665554444443332222222222222222333344444555 779999
Q ss_pred HHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCC
Q 015377 332 TGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKG 388 (408)
Q Consensus 332 ~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~ 388 (408)
++.|+......+|..++|.+.+.+.+..++.+.|.+...++++..+...+..||.++
T Consensus 131 ~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~ 187 (495)
T PRK14995 131 MALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAG 187 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 999999999999999999998888777676677777666666666666666667543
No 142
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.00 E-value=3.1e-08 Score=96.58 Aligned_cols=139 Identities=14% Similarity=0.046 Sum_probs=85.7
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHHhhhhhhhhhhhcccc
Q 015377 249 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ----SNILLTALLSGARMFSMGTFIIANIFAPEI 324 (408)
Q Consensus 249 ~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~el 324 (408)
.....+...++.++.|+++||+|||++++.+..+..+..+...... +.........+..++.....+.......|.
T Consensus 69 ~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~ 148 (452)
T PRK11273 69 LSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHW 148 (452)
T ss_pred HHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHh
Confidence 3444567788999999999999999998887776665544433221 111111222222222222234445566899
Q ss_pred cCCchhhHHHhHHHHhhhHhHh-hHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccC
Q 015377 325 YPTSMRSTGAGVAYAVGRIGGM-VCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 387 (408)
Q Consensus 325 ~p~~~R~~a~gi~~~~~~~~~~-~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 387 (408)
+|++.|+++.|+.+....+|+. .+|.+...+....++...+.+.++++++..++.+++.||+.
T Consensus 149 ~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~ 212 (452)
T PRK11273 149 WSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTP 212 (452)
T ss_pred CChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCH
Confidence 9999999999998888888764 45543322322234556677777766666566666656653
No 143
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.99 E-value=4.7e-08 Score=93.48 Aligned_cols=140 Identities=16% Similarity=0.035 Sum_probs=90.2
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCc
Q 015377 249 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTS 328 (408)
Q Consensus 249 ~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~ 328 (408)
.....+...++.++.|.++||+|||+.+..+.....+.........+........+...+......+....+..|.+|.+
T Consensus 49 ~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 128 (394)
T PRK11652 49 MAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGT 128 (394)
T ss_pred HHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHH
Confidence 33445667788999999999999999988776665554443333332222211111111211122344556678999999
Q ss_pred hhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCC
Q 015377 329 MRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKG 388 (408)
Q Consensus 329 ~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~ 388 (408)
.|+.+.+..+....++..++|.+.+.+.+..++...+.+.++..++..+...++.||++.
T Consensus 129 ~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 188 (394)
T PRK11652 129 QLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRP 188 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCc
Confidence 999999988887778888888887776665566666777666665555555556677643
No 144
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.99 E-value=3e-08 Score=97.07 Aligned_cols=173 Identities=17% Similarity=0.098 Sum_probs=105.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhh-hchHHHHHHH
Q 015377 201 LLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDR-VGRKLSMTIM 279 (408)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr-~grR~~~~~~ 279 (408)
.++...+.+.+.||+..-+.+........ .+.+............+...++.+++|+++|| +|||+.+..+
T Consensus 14 ~l~~~~~~~~~~~~~~~~~L~~yl~~~~~--------lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~ 85 (475)
T TIGR00924 14 TLFFVELWERFSYYGMQGILAVYLVQQAG--------LGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLG 85 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCC--------CCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHH
Confidence 34455566777788766655544321100 01111122233334456678899999999999 8999999888
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCc---hhhHHHhHHHHhhhHhHhhHHHHHHHHh
Q 015377 280 FIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTS---MRSTGAGVAYAVGRIGGMVCPLVAVGLV 356 (408)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~---~R~~a~gi~~~~~~~~~~~~p~~~~~l~ 356 (408)
..+.++....+....+...................+....+.+|.+|.+ .|+++.++.+...++|+.++|.+.+.+.
T Consensus 86 ~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~ 165 (475)
T TIGR00924 86 GIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIA 165 (475)
T ss_pred HHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHH
Confidence 7776665444443332222211111111221122355567778999875 4899999999999999999999988877
Q ss_pred hhcchhhHHHHHHHHHHHHHHHHHh
Q 015377 357 TSCHQTAAILLLEALIVLSVVVILL 381 (408)
Q Consensus 357 ~~~~~~~~~~~~~~~~~i~~~~~~~ 381 (408)
+..+....|.+.++.++++.+...+
T Consensus 166 ~~~g~~~~f~~~~~~~~~~~l~~~~ 190 (475)
T TIGR00924 166 ENYGYHVGFNLAAVGMVIGLLTFFA 190 (475)
T ss_pred HhcChHHHHHHHHHHHHHHHHHHHH
Confidence 7666666666666555555444333
No 145
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.99 E-value=2.3e-08 Score=95.20 Aligned_cols=140 Identities=11% Similarity=0.038 Sum_probs=95.4
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCc
Q 015377 249 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTS 328 (408)
Q Consensus 249 ~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~ 328 (408)
.....++..++.++.|+++||+|||+.+..+..+.++........++............+......+....+..|.+|.+
T Consensus 44 ~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~ 123 (382)
T PRK10091 44 ISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPG 123 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChH
Confidence 33445777889999999999999999998887776665544444333332222222222222222344556778999999
Q ss_pred hhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCC
Q 015377 329 MRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKG 388 (408)
Q Consensus 329 ~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~ 388 (408)
.|+.+.++......++..++|.+...+.+..++...+.+.+...++..+...+..||.+.
T Consensus 124 ~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~ 183 (382)
T PRK10091 124 KVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIRD 183 (382)
T ss_pred HhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCCc
Confidence 999999998888888888888877766665566677777777766666665666677543
No 146
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.99 E-value=4e-08 Score=92.79 Aligned_cols=137 Identities=20% Similarity=0.266 Sum_probs=84.6
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHHHhhhhhhhhhhhcccccCC
Q 015377 249 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ-SNILLTALLSGARMFSMGTFIIANIFAPEIYPT 327 (408)
Q Consensus 249 ~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~ 327 (408)
.....+...++.++.|+++||+|||+.+..+.++..+......... +........+..... .+.+.....+.+|.+|.
T Consensus 43 ~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~ 121 (366)
T TIGR00886 43 VAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIA-GGSFASCMPWISFFFPK 121 (366)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh-chhhHhHHHHHHHhcCH
Confidence 3444567788999999999999999998887776665544443333 222221121222222 23344456678899999
Q ss_pred chhhHHHhHHHHhhhHhHhhHHHHHHHHhhh----------cchhhHH-HHHHHHHHHHHHHHHhccccc
Q 015377 328 SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS----------CHQTAAI-LLLEALIVLSVVVILLIPFET 386 (408)
Q Consensus 328 ~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~----------~~~~~~~-~~~~~~~~i~~~~~~~~~~et 386 (408)
+.|+++.++....+.+|..+++.+.+.+... .++...+ +..+.+..+..++.+++.+|+
T Consensus 122 ~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (366)
T TIGR00886 122 KIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADT 191 (366)
T ss_pred hhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHHHHHHHhcccC
Confidence 9999999999888888777777666554432 1333445 333544444444444444443
No 147
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.99 E-value=2.4e-08 Score=94.31 Aligned_cols=137 Identities=13% Similarity=-0.006 Sum_probs=89.8
Q ss_pred HHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCch
Q 015377 250 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 329 (408)
Q Consensus 250 ~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~ 329 (408)
....++..++.+..|+++||+|||+++..+...............+-......-++... ..+.........+|.+|.+.
T Consensus 33 s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~-g~~~~~~~~~~~~~~~~~~~ 111 (368)
T TIGR00903 33 ITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAAL-GQPFLLNAFAPAASQIREER 111 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHh-HhHHHHHHHHHHHHHcCHHH
Confidence 33456677888999999999999987654433332222111111211111111111111 12233344555589999999
Q ss_pred hhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccC
Q 015377 330 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 387 (408)
Q Consensus 330 R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 387 (408)
|+++.++......+|+.+++.+.+.+.+..++...|++.+++.++..+..++..||.+
T Consensus 112 r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p 169 (368)
T TIGR00903 112 RDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALP 169 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999988887777667767777778887777777777777754
No 148
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.97 E-value=1.5e-07 Score=81.94 Aligned_cols=123 Identities=13% Similarity=0.052 Sum_probs=77.3
Q ss_pred hhHHHHHHHHHHhhhchHHHHHHHHHHHHHH---HHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCchhhH
Q 015377 256 ELPGLLTAALLVDRVGRKLSMTIMFIFVCIF---LLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRST 332 (408)
Q Consensus 256 ~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R~~ 332 (408)
..+.+.+.|.++||.||+..++.+..+..+. .+...+ -+++....++-+.. ...-+..|...+-+.|-+.-++
T Consensus 313 sav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft~-lsPy~~m~~lGLsy---sllAcslWP~va~~vpE~qLGT 388 (459)
T KOG4686|consen 313 SAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFTF-LSPYTSMTFLGLSY---SLLACSLWPCVASLVPEEQLGT 388 (459)
T ss_pred hhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhhh-ccHHHHHHHHhhhH---HHHHHHHhhhhhhhCCHHHhcc
Confidence 3456678899999999999988766555432 111111 22333322221111 1112346777888899999999
Q ss_pred HHhHHHHhhhHhHhhHHHHHHHHhhhcchh----hHHHHHHHHHHHHHHHHHhc
Q 015377 333 GAGVAYAVGRIGGMVCPLVAVGLVTSCHQT----AAILLLEALIVLSVVVILLI 382 (408)
Q Consensus 333 a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~----~~~~~~~~~~~i~~~~~~~~ 382 (408)
|+|.+..+.++|-.+.|++.+.+.+.-+.+ ..++..+.+.+.+..+.+.+
T Consensus 389 aygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~ 442 (459)
T KOG4686|consen 389 AYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYL 442 (459)
T ss_pred hHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhhe
Confidence 999999999999989999988776654422 23344455555554444444
No 149
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.94 E-value=3.8e-08 Score=95.51 Aligned_cols=140 Identities=16% Similarity=0.100 Sum_probs=90.1
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhh---hhH-HHHHHHHHHHHHhhhhhhhhhhhccc
Q 015377 248 NVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ---SNI-LLTALLSGARMFSMGTFIIANIFAPE 323 (408)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~e 323 (408)
......++..++.++.|+++||+|||+.+..+.++.++..+...... +.. .......+..++....++.......|
T Consensus 66 ~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~ 145 (438)
T TIGR00712 66 ALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVH 145 (438)
T ss_pred HHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHH
Confidence 33445567788999999999999999988877666555444332211 111 11111112222222223445566679
Q ss_pred ccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhh-hcchhhHHHHHHHHHHHHHHHHHhcccccC
Q 015377 324 IYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVT-SCHQTAAILLLEALIVLSVVVILLIPFETK 387 (408)
Q Consensus 324 l~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 387 (408)
.+|.+.|+++.|+.+....+++.++|.+.....+ ..++...+.+.++++++..+..+++.||++
T Consensus 146 ~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~ 210 (438)
T TIGR00712 146 WWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTP 210 (438)
T ss_pred hcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCH
Confidence 9999999999999999988988888776654443 234556777777777776666666666653
No 150
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.94 E-value=2.3e-08 Score=94.50 Aligned_cols=140 Identities=14% Similarity=0.065 Sum_probs=88.2
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhccccc
Q 015377 246 YINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIY 325 (408)
Q Consensus 246 ~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~ 325 (408)
.....+..++..++.+..|.++||+|||+.+..+.++..+..+......+............+.....+........|.+
T Consensus 41 g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 120 (377)
T TIGR00890 41 AIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLASAGVGIAYGIALNTAVKWF 120 (377)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHc
Confidence 33444556777889999999999999999998877766655544443333222212111222222222333444567778
Q ss_pred CCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhccccc
Q 015377 326 PTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 386 (408)
Q Consensus 326 p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et 386 (408)
| +.|+++.++......+|..+.+.+...+.+..+....+.+.++.+++..+..+++.+|.
T Consensus 121 ~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 180 (377)
T TIGR00890 121 P-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGYP 180 (377)
T ss_pred C-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheecC
Confidence 7 56999999998888888776655555555544555677777777777666666655443
No 151
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.93 E-value=8.9e-08 Score=91.89 Aligned_cols=135 Identities=19% Similarity=0.135 Sum_probs=91.6
Q ss_pred HHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCchh
Q 015377 251 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 330 (408)
Q Consensus 251 ~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R 330 (408)
+..+...++.++.|.++||+|||+.+..+.....+..+......+............+. .+..+....+..|.+|.+.|
T Consensus 62 ~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~ 140 (408)
T PRK09874 62 ITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGLL-GGFVPNANALIATQVPRNKS 140 (408)
T ss_pred HHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh-hhhHHhHHHHHHHhcCHhhh
Confidence 44466677888999999999999998877665555444333333222221111111121 23334455667789999999
Q ss_pred hHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhccccc
Q 015377 331 STGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 386 (408)
Q Consensus 331 ~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et 386 (408)
+.+.|+.+....+|.+++|.+.+.+.+..+....+.+.+++.+++.+...++.||.
T Consensus 141 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 141 GWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIREN 196 (408)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 99999999988899999998888777666666677777777777766666666664
No 152
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.91 E-value=1.5e-07 Score=90.18 Aligned_cols=133 Identities=11% Similarity=-0.020 Sum_probs=88.9
Q ss_pred HhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCchhhH
Q 015377 253 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRST 332 (408)
Q Consensus 253 ~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R~~ 332 (408)
.+......++.|.++||+|||+.+..+.....+........++.+..........+......+....+..|.+|.+.|++
T Consensus 56 ~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (400)
T PRK11646 56 QFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGR 135 (400)
T ss_pred HHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 34455567889999999999999988777766655544443332222222222222111223445667789999999999
Q ss_pred HHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhccccc
Q 015377 333 GAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 386 (408)
Q Consensus 333 a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et 386 (408)
+.|+.+....+|..++|.+.+.+. ..+....+.+.+..++++.+...+..||.
T Consensus 136 a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~ 188 (400)
T PRK11646 136 FFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAY 188 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 999999999999999999888776 44555666666666666555544555554
No 153
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.90 E-value=3.1e-07 Score=88.30 Aligned_cols=143 Identities=11% Similarity=0.069 Sum_probs=89.1
Q ss_pred hHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh-----hhhHHHHHHHHHHHHHhhhhhhhhh
Q 015377 244 SVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL-----QSNILLTALLSGARMFSMGTFIIAN 318 (408)
Q Consensus 244 ~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (408)
+......+..+.+.++.+..|++.||+|.|+++..+..+.++..+...+. .+.......-....+ ..+.++...
T Consensus 71 q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gi-gg~~f~~~~ 149 (462)
T PRK15034 71 QLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGF-AGANFASSM 149 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHH-HHHhHHHHH
Confidence 33444445556666777888999999999998888777766554444432 121111111111112 233456667
Q ss_pred hhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHh-----hhc-------------chhhHHHHHHHHHHHHHHHHH
Q 015377 319 IFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLV-----TSC-------------HQTAAILLLEALIVLSVVVIL 380 (408)
Q Consensus 319 ~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~-----~~~-------------~~~~~~~~~~~~~~i~~~~~~ 380 (408)
...++.||.+.|+++.|+....+.+|..+.+++.+.+. ... +......++....++..+..+
T Consensus 150 ~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~ 229 (462)
T PRK15034 150 GNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAW 229 (462)
T ss_pred HHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 77899999999999999998888888877666665433 211 122344567776667766666
Q ss_pred hcccccC
Q 015377 381 LIPFETK 387 (408)
Q Consensus 381 ~~~~et~ 387 (408)
++.+|.+
T Consensus 230 ~~~~~~~ 236 (462)
T PRK15034 230 SGMNDIA 236 (462)
T ss_pred HhCCCcc
Confidence 6655543
No 154
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.89 E-value=8.4e-08 Score=89.61 Aligned_cols=135 Identities=23% Similarity=0.192 Sum_probs=92.6
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCC
Q 015377 248 NVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPT 327 (408)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~ 327 (408)
......+...++.++.|.++||+|||+.+..+.....+........++............+......+....+..|.+|+
T Consensus 39 ~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~ 118 (352)
T cd06174 39 IVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPP 118 (352)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCc
Confidence 33444567788999999999999999988887776666555444333322222222222222223346667888999999
Q ss_pred chhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhc
Q 015377 328 SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLI 382 (408)
Q Consensus 328 ~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 382 (408)
+.|+++.++.+....+|+.++|.+.+.+.+..+....+.+.+...+++.+...++
T Consensus 119 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (352)
T cd06174 119 KERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFL 173 (352)
T ss_pred cchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999988877776555556666666665555554433
No 155
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.87 E-value=4.6e-08 Score=90.20 Aligned_cols=144 Identities=17% Similarity=0.107 Sum_probs=110.6
Q ss_pred hHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhccc
Q 015377 244 SVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPE 323 (408)
Q Consensus 244 ~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 323 (408)
+........++..-++-++.|.++||.+.|..+..++++++++.+.+.+..+-....++..+...+....++...-..+.
T Consensus 65 ~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~ 144 (448)
T COG2271 65 QLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITH 144 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 33444444456667889999999999999999999999999988887776644444444444444443445777778889
Q ss_pred ccCCchhhHHHhHHHHhhhHhHhhHHHHH--HHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccC
Q 015377 324 IYPTSMRSTGAGVAYAVGRIGGMVCPLVA--VGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 387 (408)
Q Consensus 324 l~p~~~R~~a~gi~~~~~~~~~~~~p~~~--~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 387 (408)
-||++-|++..++=+...++|+.+.|.+. ..+..+.+....|++-++++++..++.++..+||.
T Consensus 145 Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~P 210 (448)
T COG2271 145 WFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRP 210 (448)
T ss_pred HcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 99999999999999999999999888877 66666556677888989888888888888876653
No 156
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.87 E-value=3.1e-07 Score=90.81 Aligned_cols=109 Identities=18% Similarity=0.135 Sum_probs=74.2
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhh------hHHHHHHHHHHHHHhhhhhhhhhhh
Q 015377 247 INVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQS------NILLTALLSGARMFSMGTFIIANIF 320 (408)
Q Consensus 247 ~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (408)
.......++.++|.++.++++||+|||+.+..+.++..+..+......+ .......-+...+...+.++....+
T Consensus 60 ~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~ 139 (502)
T TIGR00887 60 AVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAII 139 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 3444556778899999999999999999987766655544333222211 1112222222223333445677899
Q ss_pred cccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHH
Q 015377 321 APEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGL 355 (408)
Q Consensus 321 ~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l 355 (408)
.+|.+|++.|+++.++.+....+|..+++.+...+
T Consensus 140 ~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~ 174 (502)
T TIGR00887 140 TSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIV 174 (502)
T ss_pred HHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888888887665433
No 157
>PRK11043 putative transporter; Provisional
Probab=98.87 E-value=3.1e-07 Score=88.01 Aligned_cols=139 Identities=17% Similarity=0.105 Sum_probs=92.2
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCC
Q 015377 248 NVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPT 327 (408)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~ 327 (408)
...+..+...++.++.|+++||+|||+.+..+..+..+.........+........+...+...........+..|.+|.
T Consensus 46 ~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~ 125 (401)
T PRK11043 46 SLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPA 125 (401)
T ss_pred HHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCc
Confidence 33444566788999999999999999999887666555444333333222221111111111112223345667899999
Q ss_pred chhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhccccc
Q 015377 328 SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 386 (408)
Q Consensus 328 ~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et 386 (408)
+.|....+..+....+++.++|.+.+.+.+..++...+.+.+.+.++..+...++++|.
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (401)
T PRK11043 126 QKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKPSK 184 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 99999999988888889999998888777766666677777777776666666665443
No 158
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.86 E-value=1.2e-07 Score=92.86 Aligned_cols=119 Identities=13% Similarity=0.033 Sum_probs=77.4
Q ss_pred hHHHHHHHHHHhh-hchHHHHHHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHHHHhhhhhhhhhhhcccccCCc--hhhH
Q 015377 257 LPGLLTAALLVDR-VGRKLSMTIMFIFVCIFLLPLVTLQS-NILLTALLSGARMFSMGTFIIANIFAPEIYPTS--MRST 332 (408)
Q Consensus 257 ~~g~~~~~~l~dr-~grR~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~--~R~~ 332 (408)
....+++|+++|| +|||++++.+.++..+.........+ ...................+....+.+|.||.+ .|..
T Consensus 64 ~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~ 143 (489)
T PRK10207 64 YGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDG 143 (489)
T ss_pred HHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhc
Confidence 3445689999999 99999999887776665444433222 111111122222222222345567889999987 4578
Q ss_pred HHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHH
Q 015377 333 GAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLS 375 (408)
Q Consensus 333 a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~ 375 (408)
+.++.+...++|+.++|.+.+.+.+..++...|.+.++..+++
T Consensus 144 ~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~ 186 (489)
T PRK10207 144 AFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIA 186 (489)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHH
Confidence 8999999999999999998888877767666666544433333
No 159
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.86 E-value=3.4e-07 Score=85.25 Aligned_cols=139 Identities=14% Similarity=0.070 Sum_probs=102.2
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhccccc
Q 015377 246 YINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIY 325 (408)
Q Consensus 246 ~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~ 325 (408)
.....+.+++..++.++...+.||+.||++++....+..+.........+-......=.+..+.....+++...+.+++.
T Consensus 51 G~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lv 130 (394)
T COG2814 51 GQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLV 130 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 34445556777889999999999999999998766665554443333222121111112222233345677888999999
Q ss_pred CCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhccc
Q 015377 326 PTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPF 384 (408)
Q Consensus 326 p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 384 (408)
|++.|++|.++.+.-..++.+++..+..++-+..|+..+|.+.+.+.+++.+......|
T Consensus 131 pp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 131 PPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred CccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999888888888767777777778888999999999999999888888
No 160
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.85 E-value=2.9e-07 Score=85.57 Aligned_cols=327 Identities=15% Similarity=0.145 Sum_probs=174.4
Q ss_pred CcchhHHHHHHHHHHHHHHHHhhhh------hHH--HHHHHHHHhhccCCcchhhhH-HHhhhcCCCcchhHHHHHHHHH
Q 015377 2 EEGRMSILGGALVTFVAGLLSAFSP------NYI--SLLILRGLAGAGLGSGHVFFS-WFMEFVPPSNRGKWMVVFSTFW 72 (408)
Q Consensus 2 ~gRr~~~~~~~~~~~~~~~~~~~~~------~~~--~l~~~R~l~Gi~~g~~~~~~~-~~~E~~p~~~Rg~~~~~~~~~~ 72 (408)
.|=|...+++.++-.+++.+-..+. .+. ..+.+..+.+.+.-..-...+ .-.-|+|+++|..+...-.++.
T Consensus 106 ~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n 185 (480)
T KOG2563|consen 106 FGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGN 185 (480)
T ss_pred cchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcc
Confidence 4667778888888887776554432 223 444555555544321111111 2235679999999998888888
Q ss_pred HHHHHHHHHHHhHhcc------ccchHHH--HHHhh-HHHHHHHHHHHhccCcchhHhhcCChhhHHHHHHHHHHHcCCC
Q 015377 73 TFGSVSEAALAWIVMP------ILTWRWL--LALSA-IPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTS 143 (408)
Q Consensus 73 ~~G~~l~~~l~~~~~~------~~~Wr~~--f~i~~-i~~~~~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~ 143 (408)
.+|..++.++.-.+.+ +..|-.. |+... +-.+.+....+..+|.|+.-
T Consensus 186 ~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tP----------------------- 242 (480)
T KOG2563|consen 186 PLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTP----------------------- 242 (480)
T ss_pred hHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC-----------------------
Confidence 8888888877766543 3457663 44222 22222222233334433210
Q ss_pred CCCCCccCCCCCCcccccCCCCCccccccccccccccccccchhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015377 144 LPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASEL 223 (408)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 223 (408)
++.. + ..+++. ...++.+.+++. ++..+....+..+...+|+........
T Consensus 243 -----ps~s------~--~~~~~~--------------~f~~si~~~~~n---~~F~il~~~ygi~~g~F~~l~~~l~~~ 292 (480)
T KOG2563|consen 243 -----PSAS------Q--AALQDA--------------SFPKSIKSCFKN---RQFIILAICYGIGLGLFNSLSTLLNLA 292 (480)
T ss_pred -----Cchh------H--hhhhcC--------------cHHHHHHHHHcC---ccHHHHHHHHhhhHHHHHHHHHHhhhc
Confidence 0000 0 000000 011122222222 123344555555555566655443311
Q ss_pred hccCCCCCcccccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhch-HHHHHHHHHHHHHH-HHHHHhh---hhhHH
Q 015377 224 SGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGR-KLSMTIMFIFVCIF-LLPLVTL---QSNIL 298 (408)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gr-R~~~~~~~~~~~~~-~~~~~~~---~~~~~ 298 (408)
....+ ..+........+..+.+++|++++|.+.||.+. |...+.......+. +...... ...++
T Consensus 293 l~~sg-----------Y~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~vi 361 (480)
T KOG2563|consen 293 LCPSG-----------YEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVI 361 (480)
T ss_pred ccccc-----------CCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEe
Confidence 11110 110111223445567788999999999999865 44444433333332 1111111 11122
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcc----hhhHHHHHHHHHHH
Q 015377 299 LTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH----QTAAILLLEALIVL 374 (408)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~----~~~~~~~~~~~~~i 374 (408)
.........++..+..++..-...|.-=+..=++..|+.+..|.+.+++-+++.+.+.+..+ .+..-+.++..+++
T Consensus 362 v~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l 441 (480)
T KOG2563|consen 362 VFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALL 441 (480)
T ss_pred hhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHH
Confidence 22222233344456667666677777656667899999999999988888888877665544 33344566677778
Q ss_pred HHHHHHhcccccCCcccc
Q 015377 375 SVVVILLIPFETKGKELV 392 (408)
Q Consensus 375 ~~~~~~~~~~et~~~~~~ 392 (408)
..+++.++.|+-|.+..+
T Consensus 442 ~~~lva~~r~~y~R~~~e 459 (480)
T KOG2563|consen 442 GAILVAFFRPDYRRLRAE 459 (480)
T ss_pred HHHHHhhhhhhHHhHhhh
Confidence 888888888776655444
No 161
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.83 E-value=6.7e-08 Score=94.42 Aligned_cols=140 Identities=19% Similarity=0.085 Sum_probs=88.5
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhh--h-HHHHHHHHHHHHHhhhhhhhhhhhccc
Q 015377 247 INVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQS--N-ILLTALLSGARMFSMGTFIIANIFAPE 323 (408)
Q Consensus 247 ~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~e 323 (408)
....+..++..++.++.|+++||+|||+.++.+.++..+.........+ . .......+...+......+....+.+|
T Consensus 75 ~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~ 154 (481)
T TIGR00879 75 LVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSE 154 (481)
T ss_pred HHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHc
Confidence 3444556777889999999999999999998876665554333322111 1 111112222222223334566788899
Q ss_pred ccCCchhhHHHhHHHHhhhHhHhhHHHHH---HHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccC
Q 015377 324 IYPTSMRSTGAGVAYAVGRIGGMVCPLVA---VGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 387 (408)
Q Consensus 324 l~p~~~R~~a~gi~~~~~~~~~~~~p~~~---~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 387 (408)
.+|.+.|+++.++.+....+|..++|.+. ....+..++...+.+.+...++.. +..++.||+.
T Consensus 155 ~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~-~~~~~l~~~~ 220 (481)
T TIGR00879 155 IAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLF-LGLFFLPESP 220 (481)
T ss_pred cCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHH-HHHhcCCCCh
Confidence 99999999999999999999999998876 322233344455655444444443 4445556753
No 162
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.83 E-value=3.9e-07 Score=87.08 Aligned_cols=134 Identities=10% Similarity=-0.045 Sum_probs=87.1
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCc
Q 015377 249 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTS 328 (408)
Q Consensus 249 ~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~ 328 (408)
.....+...+..++.|.++||+|||++++.+..+..+.........+. . ..............+....+.+|++|.+
T Consensus 44 ~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~--~-~~r~l~G~~~a~~~pa~~a~i~~~~~~~ 120 (393)
T PRK11195 44 QMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP--L-LAYGLVGIGAAAYSPAKYGILTELLPGE 120 (393)
T ss_pred HHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH--H-HHHHHHHHHHHHHHHHHHHHHHHHcCHH
Confidence 334446667788999999999999999988776655433332222221 1 1112222333344567788899999999
Q ss_pred hhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccC
Q 015377 329 MRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 387 (408)
Q Consensus 329 ~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 387 (408)
.|+++.|+......++..++|.+.+.+.+.. ...++.+.+.+.+++. +..+..||.+
T Consensus 121 ~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-~~~~~~i~~~~~~~~~-~~~~~l~~~~ 177 (393)
T PRK11195 121 KLVKANGWMEGSTIAAILLGTVLGGALADPH-AEAALAVCALIYLLAA-LFNLFIPRLG 177 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH-HHHhcCCCCc
Confidence 9999999999998899999999888776643 3333444333333343 3345556654
No 163
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.82 E-value=1.1e-07 Score=93.01 Aligned_cols=136 Identities=10% Similarity=0.016 Sum_probs=95.1
Q ss_pred HHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh--hhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCc
Q 015377 251 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL--QSNILLTALLSGARMFSMGTFIIANIFAPEIYPTS 328 (408)
Q Consensus 251 ~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~ 328 (408)
...++..++.+.+|+++||+|||+.+..+.++.++........ .+.......-+...+.....++....+.+|.+|++
T Consensus 84 ~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~ 163 (465)
T TIGR00894 84 SHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPK 163 (465)
T ss_pred HHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHH
Confidence 3446778899999999999999999988776665544333221 11111111112222222334466778889999999
Q ss_pred hhhHHHhHHHHhhhHhHhhHHHHHHHHhhh-cchhhHHHHHHHHHHHHHHHHHhccccc
Q 015377 329 MRSTGAGVAYAVGRIGGMVCPLVAVGLVTS-CHQTAAILLLEALIVLSVVVILLIPFET 386 (408)
Q Consensus 329 ~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~et 386 (408)
.|+++.|+.+....+|.+++|.+.+.+.+. .+....|.+.++..++..++.+++++|.
T Consensus 164 ~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~ 222 (465)
T TIGR00894 164 ERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADD 222 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999988877766 3666778887777776666666666553
No 164
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.81 E-value=2.2e-07 Score=89.54 Aligned_cols=140 Identities=15% Similarity=0.112 Sum_probs=87.7
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH---h-hhhh-HHHHHHHHHHHHHhhhhhhhhhhhc
Q 015377 247 INVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLV---T-LQSN-ILLTALLSGARMFSMGTFIIANIFA 321 (408)
Q Consensus 247 ~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~---~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (408)
.......+..+++.++.|.++||+|||+.+..+..+.++....+. . ..+. .......+...++.....+....+.
T Consensus 56 ~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~ 135 (417)
T PRK10489 56 LSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAAT 135 (417)
T ss_pred HHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 334444567778899999999999999988766554444322221 1 1111 1111111111122112234456678
Q ss_pred ccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccC
Q 015377 322 PEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 387 (408)
Q Consensus 322 ~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 387 (408)
+|.+|.+.|+++.++.+....+|..++|.+.+.+.+..+..+.+.+.+...+++.+....+ ||++
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~ 200 (417)
T PRK10489 136 PALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLRL-PALP 200 (417)
T ss_pred hhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhC-CCCC
Confidence 8999999999999999998899999999988877665555566666555555555544444 4543
No 165
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.81 E-value=2.9e-07 Score=89.81 Aligned_cols=130 Identities=15% Similarity=0.021 Sum_probs=85.1
Q ss_pred hhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHH-HHHHHHhhhhhhhhhhhcccccCCchhhH
Q 015377 254 FAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALL-SGARMFSMGTFIIANIFAPEIYPTSMRST 332 (408)
Q Consensus 254 ~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~el~p~~~R~~ 332 (408)
+...++..+.|+++||+|||+.++.+.++..+..+......+........ ....+...........+..|.+| +.|++
T Consensus 65 ~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~ 143 (455)
T TIGR00892 65 AVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPL 143 (455)
T ss_pred HHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHH
Confidence 44466778899999999999998877666555444333332222111111 11111111112344556678887 78999
Q ss_pred HHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhccc
Q 015377 333 GAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPF 384 (408)
Q Consensus 333 a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 384 (408)
+.|+.+....+|+.++|.+.+.+.+..++..+|.+.+++.+++.+...++.+
T Consensus 144 a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~ 195 (455)
T TIGR00892 144 ANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRP 195 (455)
T ss_pred HHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999888887777767777888888777666555555544
No 166
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.80 E-value=4.3e-07 Score=89.48 Aligned_cols=117 Identities=13% Similarity=0.031 Sum_probs=73.6
Q ss_pred HHHHHHHHhh-hchHHHHHHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHhhhhhhhhhhhcccccCCch--hhHHHh
Q 015377 260 LLTAALLVDR-VGRKLSMTIMFIFVCIFLLPLVTLQSN-ILLTALLSGARMFSMGTFIIANIFAPEIYPTSM--RSTGAG 335 (408)
Q Consensus 260 ~~~~~~l~dr-~grR~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~--R~~a~g 335 (408)
.+++|+++|| +|||+.+..+.++..+....+....+. ...........+......+....+.+|.||.+. |..+.+
T Consensus 74 ~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~ 153 (500)
T PRK09584 74 VAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFT 153 (500)
T ss_pred HHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcch
Confidence 4578999999 599999888766665544333332221 111111111222211223455567899998643 456788
Q ss_pred HHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHH
Q 015377 336 VAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSV 376 (408)
Q Consensus 336 i~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~ 376 (408)
+.+...++|+.++|.+.+++.+..++...|.+.++..+++.
T Consensus 154 ~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~ 194 (500)
T PRK09584 154 MYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITV 194 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 88999999999999999988776666666666554444443
No 167
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.79 E-value=1e-07 Score=93.26 Aligned_cols=137 Identities=15% Similarity=0.034 Sum_probs=86.7
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh-----hhhhHHHHHHHHHHHHHhhhhhhhhhhhccc
Q 015377 249 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT-----LQSNILLTALLSGARMFSMGTFIIANIFAPE 323 (408)
Q Consensus 249 ~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 323 (408)
.....+...++.++.|+++||+|||+++..+.++.++....... ..+.......-....++.....+....+.+|
T Consensus 70 ~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 149 (467)
T PRK09556 70 GLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITR 149 (467)
T ss_pred HHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHH
Confidence 33445666788999999999999999988776665554433322 1221212122122222222334566678899
Q ss_pred ccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhc---chhhHHHHHHHHHHHHHHHHHhcccc
Q 015377 324 IYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSC---HQTAAILLLEALIVLSVVVILLIPFE 385 (408)
Q Consensus 324 l~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~e 385 (408)
.+|.+.|+++.|+....+.+|+.+++.+...+.... +....+.+.+...++..+..+++.+|
T Consensus 150 ~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~ 214 (467)
T PRK09556 150 WTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSD 214 (467)
T ss_pred HcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999998887765544432 23344556666665555555555433
No 168
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.78 E-value=6.7e-07 Score=86.66 Aligned_cols=137 Identities=20% Similarity=0.111 Sum_probs=81.3
Q ss_pred HHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhh--------HHHHHHHHHHHHHhhhhhhhhhhhcc
Q 015377 251 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSN--------ILLTALLSGARMFSMGTFIIANIFAP 322 (408)
Q Consensus 251 ~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (408)
...++..+|.+++|+++||+|||+.+..+....++.........+. ......-+...+...+.++....+.+
T Consensus 71 ~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~ 150 (432)
T PRK10406 71 AGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMS 150 (432)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHH
Confidence 3345566899999999999999999988877776655444332211 01111111222222334567788899
Q ss_pred cccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHh--------hhcchhhHHHHHHHHHHHHHHHHHhcccccCC
Q 015377 323 EIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLV--------TSCHQTAAILLLEALIVLSVVVILLIPFETKG 388 (408)
Q Consensus 323 el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~--------~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~ 388 (408)
|.+|.+.|+.+.++.......|.++++.+...+. ...++...|.+-++..++. ++.....||++.
T Consensus 151 e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~-~~~~~~~~e~~~ 223 (432)
T PRK10406 151 EVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVA-LWLRRQLDETSQ 223 (432)
T ss_pred HhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH-HHHHhcCCCCch
Confidence 9999999999988876655556566554433221 1234555665544444443 333344566543
No 169
>TIGR00898 2A0119 cation transport protein.
Probab=98.76 E-value=1.9e-07 Score=92.43 Aligned_cols=135 Identities=16% Similarity=0.098 Sum_probs=91.1
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCC
Q 015377 248 NVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPT 327 (408)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~ 327 (408)
...+..++.++|.++.|+++||+|||+.++.+.++..+..+......+........++..+...+..+....+..|.+|.
T Consensus 132 ~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~ 211 (505)
T TIGR00898 132 TQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPK 211 (505)
T ss_pred HHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhhccchHHHHHHHhheecCh
Confidence 33444577788999999999999999999887776666554444433322222222333333334467788899999999
Q ss_pred chhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhccccc
Q 015377 328 SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 386 (408)
Q Consensus 328 ~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et 386 (408)
+.|+.+.++......+|.+++|.+...+ . ++...+.+.++..++..+.. ++.||+
T Consensus 212 ~~r~~~~~~~~~~~~~g~~~~~~~~~~~-~--~wr~~~~~~~i~~~~~~~~~-~~~~es 266 (505)
T TIGR00898 212 KQRAIVGTLIQVFFSLGLVLLPLVAYFI-P--DWRWLQLAVSLPTFLFFLLS-WFVPES 266 (505)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHh-h--HHHHHHHHHHHHHHHHHHHH-HhcCCC
Confidence 9999999998777777888888765433 2 24456666666666665555 455675
No 170
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.75 E-value=1.1e-06 Score=86.28 Aligned_cols=136 Identities=19% Similarity=0.116 Sum_probs=89.5
Q ss_pred HHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH---hh--hhhHHHHHHHHHHHHHhhhhhhhhhhhccccc
Q 015377 251 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLV---TL--QSNILLTALLSGARMFSMGTFIIANIFAPEIY 325 (408)
Q Consensus 251 ~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~ 325 (408)
...+-.++-.+.+|.++||+.||++++.+-++..+....+. .. .+.+....+.+....+.....+.-.++.+|+.
T Consensus 53 a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV 132 (524)
T PF05977_consen 53 ASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELV 132 (524)
T ss_pred HHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 33344456678899999999999999887665543322221 11 12222222223333333333466678899999
Q ss_pred CCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhccccc
Q 015377 326 PTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 386 (408)
Q Consensus 326 p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et 386 (408)
|.+....|.++.....++..+++|.+.+.++...+....|.+-+.+.++..+.....+++.
T Consensus 133 ~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~ 193 (524)
T PF05977_consen 133 PKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPP 193 (524)
T ss_pred cHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
Confidence 9999999999999999999999999888777766665666665655555555555555443
No 171
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.74 E-value=2.1e-07 Score=92.48 Aligned_cols=133 Identities=17% Similarity=0.197 Sum_probs=98.0
Q ss_pred HHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCchh
Q 015377 251 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 330 (408)
Q Consensus 251 ~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R 330 (408)
+..++..+|.++.|.++||+|||++++.+.++..++.+......+-.....+-++..++..+...+.+.+.+|+++++.|
T Consensus 126 ~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R 205 (521)
T KOG0255|consen 126 LFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQR 205 (521)
T ss_pred HHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhhheeecCcchh
Confidence 44467788999999999999999999998888877766655555544444444555566667778889999999999999
Q ss_pred hHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccC
Q 015377 331 STGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 387 (408)
Q Consensus 331 ~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 387 (408)
+.+..+ ..+.+.++...|....++.. ++...+.+.....++..+. .+++||.+
T Consensus 206 ~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~ 258 (521)
T KOG0255|consen 206 GLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESP 258 (521)
T ss_pred hHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcCh
Confidence 999999 88888888888877776655 3434444444444444333 67776854
No 172
>PRK15075 citrate-proton symporter; Provisional
Probab=98.74 E-value=8.8e-07 Score=85.88 Aligned_cols=98 Identities=11% Similarity=0.062 Sum_probs=63.8
Q ss_pred hhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHH--------HHHHHHHHHHHhhhhhhhhhhhcccccCC
Q 015377 256 ELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNIL--------LTALLSGARMFSMGTFIIANIFAPEIYPT 327 (408)
Q Consensus 256 ~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~el~p~ 327 (408)
..+|.++.|+++||+|||+.++.+..+.++.........+... ....-+...+......+....+.+|.+|+
T Consensus 69 ~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~ 148 (434)
T PRK15075 69 RPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATP 148 (434)
T ss_pred hhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCc
Confidence 3568899999999999999998887766655444443322111 01111111111112234456789999999
Q ss_pred chhhHHHhHHHHhhhHhHhhHHHHHH
Q 015377 328 SMRSTGAGVAYAVGRIGGMVCPLVAV 353 (408)
Q Consensus 328 ~~R~~a~gi~~~~~~~~~~~~p~~~~ 353 (408)
+.|+++.++.....+++..+++.+..
T Consensus 149 ~~rg~~~~~~~~~~~~g~~~g~~~g~ 174 (434)
T PRK15075 149 GRKGFYTSWQSASQQVAVVFAALLGY 174 (434)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988887777666665544
No 173
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.73 E-value=1.3e-06 Score=83.11 Aligned_cols=112 Identities=13% Similarity=-0.022 Sum_probs=73.6
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhccccc
Q 015377 246 YINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIY 325 (408)
Q Consensus 246 ~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~ 325 (408)
........++..++.++.++++||+|||+.+..+.....+........++............+......+.......+..
T Consensus 44 G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~ 123 (381)
T PRK03633 44 GVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSG 123 (381)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 34444555777889999999999999999998877766655444443333222222222222221122233334456778
Q ss_pred CCchhhHHHhHHHHhhhHhHhhHHHHHHHHhh
Q 015377 326 PTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVT 357 (408)
Q Consensus 326 p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~ 357 (408)
|.+.|+++.|..+....+|..++|.+.+.+.+
T Consensus 124 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~ 155 (381)
T PRK03633 124 TSRNRGRLLAAYMMVYYLGTVLGQLLVSKVST 155 (381)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 88899999999999999999999988776544
No 174
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.72 E-value=3.9e-07 Score=89.46 Aligned_cols=138 Identities=14% Similarity=0.042 Sum_probs=86.2
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh---------hhhH--H-HHHHHHHHHHHhhhhhhh
Q 015377 249 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL---------QSNI--L-LTALLSGARMFSMGTFII 316 (408)
Q Consensus 249 ~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~---------~~~~--~-~~~~~~~~~~~~~~~~~~ 316 (408)
.....++..++.++.|+++||+|||++++.+..+..+..+..... .+.. . ....-+...+...+..+.
T Consensus 61 ~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~ 140 (479)
T PRK10077 61 VASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASML 140 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhH
Confidence 344457778899999999999999999988766654433322211 1111 1 111112222233344566
Q ss_pred hhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHh--------hhcchhhHHHHHHHHHHHHHHHHHhcccccC
Q 015377 317 ANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLV--------TSCHQTAAILLLEALIVLSVVVILLIPFETK 387 (408)
Q Consensus 317 ~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~--------~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 387 (408)
...+.+|.+|.+.|+++.|+......+|..+++.+...+. +..++...+.+.++..++..+. .++.||+.
T Consensus 141 ~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~-~~~l~~s~ 218 (479)
T PRK10077 141 SPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLML-LYFVPETP 218 (479)
T ss_pred HHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHH-HHcCCCCc
Confidence 7788899999999999999988887788887776543332 1234455666655555555444 45557764
No 175
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.72 E-value=6.6e-07 Score=85.86 Aligned_cols=114 Identities=11% Similarity=0.019 Sum_probs=70.9
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH---hhhhhHHHHH-HHHHHHHHhhhhhhhhhhhcc
Q 015377 247 INVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLV---TLQSNILLTA-LLSGARMFSMGTFIIANIFAP 322 (408)
Q Consensus 247 ~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 322 (408)
.......+...++.++.|.++||+|||+.+..+..+.++...... ...++..... .............+....+..
T Consensus 52 ~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~ 131 (402)
T TIGR00897 52 SAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVV 131 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHH
Confidence 334455577788999999999999999999887666655433221 1111221111 111111111112233345567
Q ss_pred cccCCchhhHHHhHHHHhhhHhH-hhHHHHHHHHhhhcc
Q 015377 323 EIYPTSMRSTGAGVAYAVGRIGG-MVCPLVAVGLVTSCH 360 (408)
Q Consensus 323 el~p~~~R~~a~gi~~~~~~~~~-~~~p~~~~~l~~~~~ 360 (408)
|.+|++.|+++.|+.++...+|. .++|.+.+.+.+..+
T Consensus 132 ~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g 170 (402)
T TIGR00897 132 YNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFG 170 (402)
T ss_pred HhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 88999999999999999988885 577877666655444
No 176
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.71 E-value=9.1e-07 Score=84.73 Aligned_cols=125 Identities=12% Similarity=-0.092 Sum_probs=75.8
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH---hhhh----hH-HHHHHHHHHHHHhhhhhhhhh
Q 015377 247 INVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLV---TLQS----NI-LLTALLSGARMFSMGTFIIAN 318 (408)
Q Consensus 247 ~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~---~~~~----~~-~~~~~~~~~~~~~~~~~~~~~ 318 (408)
.......+...++.++.|.++||+|||+++..+.++..+..+... ...+ .. .....-+..........+...
T Consensus 55 ~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 134 (399)
T PRK05122 55 LVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSI 134 (399)
T ss_pred HHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHH
Confidence 334444566778889999999999999999887765544322211 1111 01 111111111111122234445
Q ss_pred hhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHH
Q 015377 319 IFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEAL 371 (408)
Q Consensus 319 ~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~ 371 (408)
.+..|.+|.+.|+++.++.......|..++|.+.+.+.+..+....+.+.+..
T Consensus 135 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~ 187 (399)
T PRK05122 135 LWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLL 187 (399)
T ss_pred HHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 66689999999999999988777788888888877666655544444443333
No 177
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.69 E-value=6.7e-08 Score=93.10 Aligned_cols=116 Identities=17% Similarity=0.153 Sum_probs=91.0
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhh-h---hHHHHHHHHHHhhccCCcch-hhhHHHhhhcCCCcchhHHHHHH-HHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFS-P---NYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFS-TFWTF 74 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~-~---~~~~l~~~R~l~Gi~~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~-~~~~~ 74 (408)
|.|||+.+..+.++..++..+.... + ++..+++.+++.|++.+... ....++.|.+|+++||+..++.+ ..+.+
T Consensus 277 r~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~l 356 (418)
T TIGR00889 277 RFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGF 356 (418)
T ss_pred HhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhh
Confidence 4699999999999888776555553 2 35678889999999987653 44567899999999999999997 67889
Q ss_pred HHHHHHHHHhHhccc------cchHHHHHHhhHHHHHH-HHHHHhccCc
Q 015377 75 GSVSEAALAWIVMPI------LTWRWLLALSAIPAFVL-LIFIVFMPES 116 (408)
Q Consensus 75 G~~l~~~l~~~~~~~------~~Wr~~f~i~~i~~~~~-~~~~~~lpES 116 (408)
|..+++.++..+.+. +|||..|.+.++..++. .+..+++||+
T Consensus 357 g~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 357 GSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 999999998877654 57999999887776554 4456667776
No 178
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.68 E-value=1.8e-06 Score=81.84 Aligned_cols=138 Identities=16% Similarity=0.037 Sum_probs=83.6
Q ss_pred HHHhhhhHHHHHHHHHHhhhchHHHHHH-HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCch
Q 015377 251 ITSFAELPGLLTAALLVDRVGRKLSMTI-MFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 329 (408)
Q Consensus 251 ~~~~~~~~g~~~~~~l~dr~grR~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~ 329 (408)
...+...+...+.|.++||.|||+.++. +.....+.........+...................+....+..|..|.+.
T Consensus 41 ~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~ 120 (375)
T TIGR00899 41 GSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTG 120 (375)
T ss_pred HHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcc
Confidence 3345566777888999999998886554 333333332322332222211111111111112233445566678888777
Q ss_pred hhHH--HhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCC
Q 015377 330 RSTG--AGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKG 388 (408)
Q Consensus 330 R~~a--~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~ 388 (408)
|+.+ .+.....+.+|..++|.+.+.+.+..++...+.+.+.+.++..+...++.||.+.
T Consensus 121 ~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 181 (375)
T TIGR00899 121 REAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPSYPR 181 (375)
T ss_pred hhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 7655 5777777778889999888877766666677888887777777776665666543
No 179
>PRK09952 shikimate transporter; Provisional
Probab=98.67 E-value=2.3e-06 Score=83.11 Aligned_cols=135 Identities=16% Similarity=0.042 Sum_probs=81.6
Q ss_pred HHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhH----H----HHHHHHHHHHHhhhhhhhhhhhccc
Q 015377 252 TSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNI----L----LTALLSGARMFSMGTFIIANIFAPE 323 (408)
Q Consensus 252 ~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~~~e 323 (408)
..+...+|.++.|+++||+|||+.+..+..+.++......+..+.. . ....-+...+...+.++....+.+|
T Consensus 73 ~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e 152 (438)
T PRK09952 73 GFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVE 152 (438)
T ss_pred HHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHH
Confidence 3455678889999999999999999888777766555444433211 1 1111112222222334556778899
Q ss_pred ccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhh--------hcchhhHHHHHHHHHHHHHHHHHhcccccC
Q 015377 324 IYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVT--------SCHQTAAILLLEALIVLSVVVILLIPFETK 387 (408)
Q Consensus 324 l~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 387 (408)
.+|.+.|+...+.......+|..+++.+...+.. ..++..+|++.++..++. +......||++
T Consensus 153 ~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~-~~l~~~~~es~ 223 (438)
T PRK09952 153 SAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIA-LWVRNGMEESA 223 (438)
T ss_pred hCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHH-HHHHHhCCCCh
Confidence 9999999998888877777777776554443321 234445665554443332 33334456654
No 180
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.67 E-value=9.8e-07 Score=84.38 Aligned_cols=129 Identities=12% Similarity=-0.021 Sum_probs=84.0
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCC
Q 015377 248 NVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPT 327 (408)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~ 327 (408)
......++..++.+..++++||+|||+++..+..+.++........++.......-.+..+......+....+..|.+|
T Consensus 49 ~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~- 127 (393)
T PRK09705 49 LTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ- 127 (393)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-
Confidence 3334446677888999999999999999999888887776665554433322222222222222233444556788888
Q ss_pred chhhHHHhHHHHhhhHhHhhHHHHHHHHhhhc-chhhHHHHHHHHHHHHHH
Q 015377 328 SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSC-HQTAAILLLEALIVLSVV 377 (408)
Q Consensus 328 ~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~-~~~~~~~~~~~~~~i~~~ 377 (408)
+.|+.+.|+.......|+.+++.+.+.+.+.. ++...+.+++...++...
T Consensus 128 ~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~ 178 (393)
T PRK09705 128 QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALF 178 (393)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 67999999998888888888888777666543 344455555554444433
No 181
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.66 E-value=1.8e-06 Score=79.81 Aligned_cols=147 Identities=17% Similarity=0.127 Sum_probs=101.2
Q ss_pred cchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH--hhhhhhhhh
Q 015377 241 QDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMF--SMGTFIIAN 318 (408)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 318 (408)
+..+.+....+..+.+.+.-+.-+++.||+|.|+....+.++..+-.+.+.+.........++.+..+. ..+.+.+.-
T Consensus 47 S~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~GasFav~m 126 (417)
T COG2223 47 SEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGASFAVGM 126 (417)
T ss_pred CHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcccceehccc
Confidence 345566777788888888899999999999999988887766555333333322111001111111111 234456677
Q ss_pred hhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcc---hhhHHHHHHHHHHHHHHHHHhcccccCC
Q 015377 319 IFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH---QTAAILLLEALIVLSVVVILLIPFETKG 388 (408)
Q Consensus 319 ~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~---~~~~~~~~~~~~~i~~~~~~~~~~et~~ 388 (408)
...++-||++.+++|.|+.. .|++|..+..++.|.+....+ .+....++....++..+...+...|...
T Consensus 127 ~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~ 198 (417)
T COG2223 127 PNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPE 198 (417)
T ss_pred ccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChh
Confidence 78899999999999999999 999999998888887777666 5556667777777766666666655433
No 182
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.66 E-value=1.1e-05 Score=78.02 Aligned_cols=112 Identities=18% Similarity=0.203 Sum_probs=72.4
Q ss_pred chhH-HHHHHHHHHHHHHHHhhhh----hHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCC--CcchhHHHHHHHHHHHH
Q 015377 4 GRMS-ILGGALVTFVAGLLSAFSP----NYISLLILRGLAGAGLGSG-HVFFSWFMEFVPP--SNRGKWMVVFSTFWTFG 75 (408)
Q Consensus 4 Rr~~-~~~~~~~~~~~~~~~~~~~----~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~--~~Rg~~~~~~~~~~~~G 75 (408)
|||. ++++.++...+.+..+..+ +.....+.=++..+|.... .+.-..++|.... +.||...+.......+|
T Consensus 57 rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G 136 (433)
T PF03092_consen 57 RRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVG 136 (433)
T ss_pred cchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHH
Confidence 4444 4555555544444444433 4555555556666665544 3344566677633 33788888888889999
Q ss_pred HHHHHHHHhHhccccchHHHHHHhhHHHHHH-HHHHHhccC
Q 015377 76 SVSEAALAWIVMPILTWRWLLALSAIPAFVL-LIFIVFMPE 115 (408)
Q Consensus 76 ~~l~~~l~~~~~~~~~Wr~~f~i~~i~~~~~-~~~~~~lpE 115 (408)
.+++..+++.+.+..++|+.|.+.++...+. +...+..+|
T Consensus 137 ~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 137 SLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred HHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhhh
Confidence 9999999988888889999999887655554 444455555
No 183
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.65 E-value=2e-07 Score=85.12 Aligned_cols=141 Identities=18% Similarity=0.142 Sum_probs=105.6
Q ss_pred HHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCch
Q 015377 250 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 329 (408)
Q Consensus 250 ~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~ 329 (408)
..-++.+++...+.|.+.||+|+|..+++++++.....+.+.+.++.......=................+.++.||.+.
T Consensus 113 askA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~ 192 (464)
T KOG3764|consen 113 ASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDN 192 (464)
T ss_pred HHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccch
Confidence 33457778888999999999999999999888776655555544432211111112222223334556778899999976
Q ss_pred -hhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCCcc
Q 015377 330 -RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGKE 390 (408)
Q Consensus 330 -R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~~~ 390 (408)
|+++.|+.-++-.+|-.++|.+.+.+.+..|...+|+++++++++.....++..+.++.++
T Consensus 193 er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~ 254 (464)
T KOG3764|consen 193 ERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDP 254 (464)
T ss_pred hhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCc
Confidence 6999999999999999999998888888888889999999999999999888886655544
No 184
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.64 E-value=3.2e-06 Score=81.28 Aligned_cols=111 Identities=13% Similarity=0.005 Sum_probs=73.6
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh---hhhHHHHHHHHHHHHHhhhhhhhhhhhcc
Q 015377 246 YINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL---QSNILLTALLSGARMFSMGTFIIANIFAP 322 (408)
Q Consensus 246 ~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (408)
........++..++.+..+++.||+|||+.+..+..+.++........ .+........+..........+....+..
T Consensus 41 g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~ 120 (410)
T TIGR00885 41 ALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYIL 120 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHH
Confidence 344455567778899999999999999999988877665544332211 11111111122222222222344456677
Q ss_pred cccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHh
Q 015377 323 EIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLV 356 (408)
Q Consensus 323 el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~ 356 (408)
|+.|.+.|++..++.+.+..+|+.++|.+...+.
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~ 154 (410)
T TIGR00885 121 VMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLI 154 (410)
T ss_pred HHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8889999999999999999999999998877664
No 185
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.64 E-value=2.2e-05 Score=73.68 Aligned_cols=116 Identities=16% Similarity=0.203 Sum_probs=94.9
Q ss_pred cchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcchhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHH
Q 015377 3 EGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAAL 82 (408)
Q Consensus 3 gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l 82 (408)
|-|+++++..+-..+...+..+.++...+-+.-+.-|++.+...+.++|+--..|+++-.++.+....+.-.|..+++++
T Consensus 69 ~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~~a~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~l 148 (412)
T PF01770_consen 69 RYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLATAAEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLL 148 (412)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHHHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56888888888888888889999999999999999999999887777777667788888889999999999999999988
Q ss_pred HhHhcc--ccchHHHHHHhhHHHHHHHHHHHhccCcch
Q 015377 83 AWIVMP--ILTWRWLLALSAIPAFVLLIFIVFMPESPR 118 (408)
Q Consensus 83 ~~~~~~--~~~Wr~~f~i~~i~~~~~~~~~~~lpESp~ 118 (408)
+..+.. ..+.+.+.++......+.++..+++|..++
T Consensus 149 gQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~~~ 186 (412)
T PF01770_consen 149 GQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMPKR 186 (412)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 887654 556777877776655555666677887654
No 186
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.63 E-value=2.1e-07 Score=84.52 Aligned_cols=104 Identities=15% Similarity=0.123 Sum_probs=77.7
Q ss_pred HhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCchhhH
Q 015377 253 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRST 332 (408)
Q Consensus 253 ~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R~~ 332 (408)
++.+.+.+...|.++||.|||+++.+|.+...+....+....+-...+..=++... ..+..++.-++.+|+++.+.|+.
T Consensus 78 ~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi-~kgnl~v~rAiisdV~sek~r~l 156 (451)
T KOG2615|consen 78 SILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGI-FKGNLSVIRAIISDVVSEKYRPL 156 (451)
T ss_pred HHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-ccCchHHHHHHHHhhcChhhccc
Confidence 46677888999999999999999999888887765554443321111111122222 24555788899999999999999
Q ss_pred HHhHHHHhhhHhHhhHHHHHHHHhh
Q 015377 333 GAGVAYAVGRIGGMVCPLVAVGLVT 357 (408)
Q Consensus 333 a~gi~~~~~~~~~~~~p~~~~~l~~ 357 (408)
+.+.......+|-+++|.+.+++..
T Consensus 157 ~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 157 GMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred eeeeeehhhhcchhhcchhhhHHHh
Confidence 9999999999999999998887655
No 187
>PRK12382 putative transporter; Provisional
Probab=98.62 E-value=3.8e-06 Score=80.24 Aligned_cols=114 Identities=13% Similarity=-0.130 Sum_probs=70.5
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH---hh-----hhhHHHHHHHHHHHHHhhhhhhhhhh
Q 015377 248 NVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLV---TL-----QSNILLTALLSGARMFSMGTFIIANI 319 (408)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~---~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (408)
......+...++.+..|+++||+|||+.++.+.+...+..+... .. .+.......-...........+....
T Consensus 56 ~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~ 135 (392)
T PRK12382 56 AVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALT 135 (392)
T ss_pred HHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444566778889999999999999998887665544322111 11 11111111111111111112233455
Q ss_pred hcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcch
Q 015377 320 FAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQ 361 (408)
Q Consensus 320 ~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~ 361 (408)
+..|.+|.+.|+++.|+.......+..++|.+.+.+.+..+.
T Consensus 136 ~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~ 177 (392)
T PRK12382 136 WGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGF 177 (392)
T ss_pred HHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccCh
Confidence 668999999999999998877778888888887766655443
No 188
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.59 E-value=4.3e-06 Score=91.09 Aligned_cols=136 Identities=15% Similarity=-0.089 Sum_probs=83.5
Q ss_pred HHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHH--HHHHHHHhh-hhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCC
Q 015377 251 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVC--IFLLPLVTL-QSNILLTALLSGARMFSMGTFIIANIFAPEIYPT 327 (408)
Q Consensus 251 ~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~ 327 (408)
+..+..++.++++|.++||+|||+++........ .....+... .+.+......++...+.....+....+..|++|.
T Consensus 60 ~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~ 139 (1140)
T PRK06814 60 VFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNK 139 (1140)
T ss_pred HHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCc
Confidence 3345567788899999999999997633211111 111111111 2222222233333333334457778899999999
Q ss_pred chhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccC
Q 015377 328 SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 387 (408)
Q Consensus 328 ~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 387 (408)
+.|+.+.|+.++...+|..++|.+.+.+....+....+ +.++...+..++..+..|+++
T Consensus 140 ~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 198 (1140)
T PRK06814 140 DELLGANALVEAGTFIAILLGTIIGGLATISGNFVILV-ALLMGIAVLGWLASLFIPKTG 198 (1140)
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHH-HHHHHHHHHHHHHHhhCCCCC
Confidence 99999999999999999999999998877765544444 333333333333344444543
No 189
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.59 E-value=1.7e-07 Score=90.52 Aligned_cols=116 Identities=14% Similarity=0.065 Sum_probs=92.6
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHH-HHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVV-FSTFWTFGSVS 78 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~-~~~~~~~G~~l 78 (408)
|.|||+.+.++.++..++.++.++++|...+++.+++.|++.+.. .....++.|..|++.|+...+. ++....+|.++
T Consensus 288 r~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~i 367 (420)
T PRK09528 288 RIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVF 367 (420)
T ss_pred HhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHH
Confidence 578999999999988888888889999999999999999887664 3445678899999999987654 67778899999
Q ss_pred HHHHHhHhccccchHHHHHHhhHHHHHH-HHHHHhccCc
Q 015377 79 EAALAWIVMPILTWRWLLALSAIPAFVL-LIFIVFMPES 116 (408)
Q Consensus 79 ~~~l~~~~~~~~~Wr~~f~i~~i~~~~~-~~~~~~lpES 116 (408)
++.+...+.+..|||..|.+.++..++. .+.++.+++.
T Consensus 368 g~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~ 406 (420)
T PRK09528 368 LSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGD 406 (420)
T ss_pred HHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999988888889999999877665544 3444444443
No 190
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.58 E-value=4.4e-06 Score=91.16 Aligned_cols=109 Identities=17% Similarity=0.001 Sum_probs=73.4
Q ss_pred HHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH---hhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccC
Q 015377 250 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLV---TLQSNILLTALLSGARMFSMGTFIIANIFAPEIYP 326 (408)
Q Consensus 250 ~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p 326 (408)
.+..+..+++.+++|+++||+|||++++.+.++..+..+... ...+........++..+......+....+.+|++|
T Consensus 54 ~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 133 (1146)
T PRK08633 54 ALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVG 133 (1146)
T ss_pred HHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcC
Confidence 344466678889999999999999998876654433322211 11221222222222222222334566788999999
Q ss_pred CchhhHHHhHHHHhhhHhHhhHHHHHHHHhhh
Q 015377 327 TSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS 358 (408)
Q Consensus 327 ~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~ 358 (408)
.+.|+++.|+......+|.+++|.+.+.+...
T Consensus 134 ~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 134 KENLSRANGLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred cccchhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999888776654
No 191
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.57 E-value=6.2e-06 Score=81.18 Aligned_cols=129 Identities=19% Similarity=0.230 Sum_probs=84.6
Q ss_pred HHHHHHHHHHhhh-----chHHHHH-HHHHHHHHHHHHHHhhh--hhH-HHHHHHHHHHHHhhhhhhhhhhhcccccCCc
Q 015377 258 PGLLTAALLVDRV-----GRKLSMT-IMFIFVCIFLLPLVTLQ--SNI-LLTALLSGARMFSMGTFIIANIFAPEIYPTS 328 (408)
Q Consensus 258 ~g~~~~~~l~dr~-----grR~~~~-~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~ 328 (408)
.+.++.+.++||+ |||+..+ .+.+...+....+.+.. ++. ..........++..........+.+|.+|.+
T Consensus 60 ~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~ 139 (491)
T PRK11010 60 VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAE 139 (491)
T ss_pred HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChh
Confidence 5778999999999 9998644 44444434333332321 121 1111222222233333455678889999999
Q ss_pred hhhHHHhHHHHhhhHhHhhHHHHHHHHhh-hcchhhHHHHHHHHHHHHHHHHHhcccccC
Q 015377 329 MRSTGAGVAYAVGRIGGMVCPLVAVGLVT-SCHQTAAILLLEALIVLSVVVILLIPFETK 387 (408)
Q Consensus 329 ~R~~a~gi~~~~~~~~~~~~p~~~~~l~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 387 (408)
.|+++.++.....++|.++++.+...+.+ ..++...|.+.++..++..+..++ .||++
T Consensus 140 ~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~-~~e~~ 198 (491)
T PRK11010 140 ERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLL-APEPT 198 (491)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHh-cCCCc
Confidence 99999999999999999999888777766 346667787878777776555554 46764
No 192
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.56 E-value=3.1e-06 Score=83.45 Aligned_cols=125 Identities=15% Similarity=0.107 Sum_probs=74.5
Q ss_pred HHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHH-HHHHHHHHHhhhhhhhhhhhcccccCCc
Q 015377 250 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLT-ALLSGARMFSMGTFIIANIFAPEIYPTS 328 (408)
Q Consensus 250 ~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~el~p~~ 328 (408)
....+...++..+.|.++|.+|||..++.+.++..+-.+.....++-.... ...+.+ . ..+.........+|+.|.+
T Consensus 85 ~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~G-v-gaG~~~~~~~~isEl~p~k 162 (599)
T PF06609_consen 85 TAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYG-V-GAGVQELAALAISELVPNK 162 (599)
T ss_pred HHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHH-H-hhHHHHHHHHHHHHhcccc
Confidence 334456667788899999999999999888777666554444333221111 111111 1 1233344566689999999
Q ss_pred hhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHH
Q 015377 329 MRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSV 376 (408)
Q Consensus 329 ~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~ 376 (408)
.|..+.++.....-+....+|.+...+....++.+.|.+..+...+++
T Consensus 163 ~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~ 210 (599)
T PF06609_consen 163 WRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIAL 210 (599)
T ss_pred hhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHH
Confidence 999888777654434444566665444333344455555554444443
No 193
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.54 E-value=7.8e-05 Score=71.99 Aligned_cols=113 Identities=21% Similarity=0.263 Sum_probs=87.8
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCc---chhhhHHHhhhcCCCcchhHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGS---GHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSV 77 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~---~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~ 77 (408)
+.|||..+.+......+...+..+.. ++.++ +.|+..|. .....+|+++....++|....++.+..+..+..
T Consensus 88 ~~grk~~L~~~~~~~~l~~~~~~~~~-~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~ 162 (463)
T KOG2816|consen 88 RYGRKVVLLLPLFGTILPALCLLFQG-YWFFL----LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLV 162 (463)
T ss_pred hhhhhhhHHHHHHHHHHhHHHHHHHH-HHHhh----hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHh
Confidence 47999999999998888887776666 33333 66654443 235567899999999999999999998999999
Q ss_pred HHHHHHhHhccccchHHHHHHhhHHHHHH-HHHHHhccCcch
Q 015377 78 SEAALAWIVMPILTWRWLLALSAIPAFVL-LIFIVFMPESPR 118 (408)
Q Consensus 78 l~~~l~~~~~~~~~Wr~~f~i~~i~~~~~-~~~~~~lpESp~ 118 (408)
+++.++.......+.=.+|.+..+..++. .+...++|||-.
T Consensus 163 ~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~ 204 (463)
T KOG2816|consen 163 IGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQ 204 (463)
T ss_pred HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccC
Confidence 99988888777778888888888776665 456778999843
No 194
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.51 E-value=8.4e-06 Score=77.90 Aligned_cols=114 Identities=19% Similarity=0.263 Sum_probs=82.6
Q ss_pred hhHHHHHHHHHHHHHHHH-hh---hh-hHHHHHHHHHHhhccCCcchhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015377 5 RMSILGGALVTFVAGLLS-AF---SP-NYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 79 (408)
Q Consensus 5 r~~~~~~~~~~~~~~~~~-~~---~~-~~~~l~~~R~l~Gi~~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 79 (408)
|+-++.+.++.+++.++- +. .+ ..+.++++|++.|+|.|...+.=.|++...-.++|-++++....+..+|.++|
T Consensus 102 k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilG 181 (488)
T KOG2325|consen 102 KKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILG 181 (488)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHh
Confidence 666788888888888765 22 23 56789999999999999877777789998889999999999888888899988
Q ss_pred HHHHhHhcc--ccc-----------hHHHHHHhhHHHHHH-HHHHHhccCcch
Q 015377 80 AALAWIVMP--ILT-----------WRWLLALSAIPAFVL-LIFIVFMPESPR 118 (408)
Q Consensus 80 ~~l~~~~~~--~~~-----------Wr~~f~i~~i~~~~~-~~~~~~lpESp~ 118 (408)
|.++....+ ..| +-.+-|+..+..++. ++..+++.|.++
T Consensus 182 p~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~ 234 (488)
T KOG2325|consen 182 PTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYR 234 (488)
T ss_pred HHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeeccc
Confidence 888766532 111 334555665555554 334556677554
No 195
>PRK15011 sugar efflux transporter B; Provisional
Probab=98.50 E-value=3e-05 Score=74.18 Aligned_cols=133 Identities=14% Similarity=0.030 Sum_probs=75.6
Q ss_pred hhhHHHHHHHHHHhhhchHHHHH-HHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCchhh--
Q 015377 255 AELPGLLTAALLVDRVGRKLSMT-IMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRS-- 331 (408)
Q Consensus 255 ~~~~g~~~~~~l~dr~grR~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R~-- 331 (408)
..+.+.+.+++ +||.|||+.++ .+.....+.........+...................+....+..|..|.+-|.
T Consensus 64 ~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (393)
T PRK15011 64 GILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAV 142 (393)
T ss_pred HHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHH
Confidence 44456666666 99999998754 333333332222222222221111111111111222344455556666665453
Q ss_pred HHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCC
Q 015377 332 TGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKG 388 (408)
Q Consensus 332 ~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~ 388 (408)
...++.+....+|.+++|.+.+.+.+..++...|.+.+..+++..+...+..||.+.
T Consensus 143 ~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~ 199 (393)
T PRK15011 143 MFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRK 199 (393)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccCC
Confidence 334677777889999999998887776677777877777777776666666667643
No 196
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.50 E-value=2.9e-06 Score=80.66 Aligned_cols=132 Identities=19% Similarity=0.141 Sum_probs=78.9
Q ss_pred hhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhH----H----HHHHHHHHHHHhhhhhhhhhhhcccccC
Q 015377 255 AELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNI----L----LTALLSGARMFSMGTFIIANIFAPEIYP 326 (408)
Q Consensus 255 ~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~~~el~p 326 (408)
...++.++.|+++||+|||+.+..+.++..+.........+.. . .....+...+......+....+.+|.+|
T Consensus 47 ~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~ 126 (394)
T TIGR00883 47 ARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAP 126 (394)
T ss_pred HhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCC
Confidence 3356888999999999999999887776665544433322211 0 1111111111112223455678899999
Q ss_pred CchhhHHHhHHHHhhhHhHhhHHHHHHHHhh--------hcchhhHHHHHHHHHHHHHHHHHhcccccC
Q 015377 327 TSMRSTGAGVAYAVGRIGGMVCPLVAVGLVT--------SCHQTAAILLLEALIVLSVVVILLIPFETK 387 (408)
Q Consensus 327 ~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 387 (408)
.+.|+...++......+|.++++.+...+.. ..++..++.+.+.+.+++... ....||++
T Consensus 127 ~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~-~~~~~~~~ 194 (394)
T TIGR00883 127 PGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYL-RRNLEETP 194 (394)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHH-HHhcCCCh
Confidence 9999999999998888888888876543321 223344555544444444333 33334543
No 197
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.49 E-value=2.3e-07 Score=86.54 Aligned_cols=143 Identities=13% Similarity=0.020 Sum_probs=98.8
Q ss_pred HHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCchh
Q 015377 251 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 330 (408)
Q Consensus 251 ~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R 330 (408)
...+...+.+.+.|++.||.+|+.++..+..+-.+..+...+...-+.....-......-....++...+.+|.||...|
T Consensus 76 vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~R 155 (493)
T KOG1330|consen 76 VFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKR 155 (493)
T ss_pred HHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhh
Confidence 33456677889999999999999999998887777666555442222222211122222234456778889999999999
Q ss_pred hHHHhHHHHhhhHhHhhHHHHHHHHhhhcc-hhhHHHHHHHHHHHHHHHHHhcccccCCccccc
Q 015377 331 STGAGVAYAVGRIGGMVCPLVAVGLVTSCH-QTAAILLLEALIVLSVVVILLIPFETKGKELVN 393 (408)
Q Consensus 331 ~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~et~~~~~~~ 393 (408)
+++.++-|....+|++++-.....+-...+ +.+.+..-+++.++.+++..++.+|...+.-+|
T Consensus 156 s~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~ 219 (493)
T KOG1330|consen 156 SRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDE 219 (493)
T ss_pred hHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcccccccc
Confidence 999999999998887776443332222222 456777888888888888888888876544444
No 198
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.48 E-value=6.4e-06 Score=77.55 Aligned_cols=124 Identities=12% Similarity=-0.005 Sum_probs=73.8
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCC
Q 015377 248 NVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPT 327 (408)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~ 327 (408)
...+..+...++.+..++++||+|||+.+..+.....+..... ...+........+...+...........+..|.+|
T Consensus 40 ~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~- 117 (355)
T TIGR00896 40 LTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTALIGVGIAIINVLLPSLIKRDFP- 117 (355)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHhccchHHHHHhCc-
Confidence 3344456777889999999999999999887765544433322 22222211111111111111112334456678887
Q ss_pred chhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcc--hhhHHHHHHHHHH
Q 015377 328 SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH--QTAAILLLEALIV 373 (408)
Q Consensus 328 ~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~--~~~~~~~~~~~~~ 373 (408)
+.|+++.|+.+....+|..+++.+.+.+.+..+ +...+.+.++..+
T Consensus 118 ~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~ 165 (355)
T TIGR00896 118 QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPAL 165 (355)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 579999999998888888888887776655432 2334444444333
No 199
>PRK10133 L-fucose transporter; Provisional
Probab=98.48 E-value=2.7e-05 Score=75.50 Aligned_cols=144 Identities=13% Similarity=0.047 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccccCccchhHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHH
Q 015377 201 LLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMF 280 (408)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~ 280 (408)
.+..+++...+.........|.+.... +.+............++..++.+..+.++||+|||+.+..+.
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~p~i~~~~-----------~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~ 98 (438)
T PRK10133 30 LLCSLFFLWAVANNLNDILLPQFQQAF-----------TLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGL 98 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 344444444444444555556554322 122233344445556778889999999999999999998887
Q ss_pred HHHHHHHHHHH---hhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHH
Q 015377 281 IFVCIFLLPLV---TLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGL 355 (408)
Q Consensus 281 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l 355 (408)
.+..+..+... ...+........+...+...........+..|..|.+.|....++.+.+..+|..++|.+...+
T Consensus 99 ~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l 176 (438)
T PRK10133 99 FLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSL 176 (438)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76665443321 1122122212222222222223344455667887777777788888888888998888776543
No 200
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.47 E-value=6.1e-06 Score=77.70 Aligned_cols=128 Identities=23% Similarity=0.232 Sum_probs=81.2
Q ss_pred HHHHHHHHhhh-----chHHHH-HHHHHHHHHHHHHHHhhh--hhH-HHHHHHHHHHHHhhhhhhhhhhhcccccCCchh
Q 015377 260 LLTAALLVDRV-----GRKLSM-TIMFIFVCIFLLPLVTLQ--SNI-LLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 330 (408)
Q Consensus 260 ~~~~~~l~dr~-----grR~~~-~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R 330 (408)
.++.|.++||+ |||+.+ +.+.+..++....+.+.. ... ...........+.....+....+.+|.+|.+.|
T Consensus 38 ~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r 117 (356)
T TIGR00901 38 KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEEL 117 (356)
T ss_pred HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhh
Confidence 67899999997 898875 444444444433333321 111 111111112222222234557788999999999
Q ss_pred hHHHhHHHHhhhHhHhhHHHHHHHHhhhcc--------hhhHHHHHHHHHHHHHHHHHhcccccC
Q 015377 331 STGAGVAYAVGRIGGMVCPLVAVGLVTSCH--------QTAAILLLEALIVLSVVVILLIPFETK 387 (408)
Q Consensus 331 ~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~--------~~~~~~~~~~~~~i~~~~~~~~~~et~ 387 (408)
+.+.|+......+|.++++.+...+....+ +...+.+.+++.++..+...+..||.+
T Consensus 118 ~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~ 182 (356)
T TIGR00901 118 GYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLFLAKEPQ 182 (356)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 999999998888999989888776665555 555677777766666656565566754
No 201
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.47 E-value=1.9e-05 Score=76.48 Aligned_cols=141 Identities=12% Similarity=0.011 Sum_probs=85.1
Q ss_pred HHHHHHHhhhhHHHHHHHHHHh----hhchHHHHHHHHH-HHHHHHHHHHhhhhh-------------HH----HHHHHH
Q 015377 247 INVFITSFAELPGLLTAALLVD----RVGRKLSMTIMFI-FVCIFLLPLVTLQSN-------------IL----LTALLS 304 (408)
Q Consensus 247 ~~~~~~~~~~~~g~~~~~~l~d----r~grR~~~~~~~~-~~~~~~~~~~~~~~~-------------~~----~~~~~~ 304 (408)
....+..+.+++...+.|.++| |+|||+.++.... ...+.+..+.+..+. .. ....+.
T Consensus 43 ~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~ 122 (477)
T TIGR01301 43 IIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFW 122 (477)
T ss_pred HHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHH
Confidence 3344556777888899999999 5999999876433 333333333221110 00 011111
Q ss_pred HHHHHhhhhhhhhhhhcccccCCchh--hHHHhHHHHhhhHhHhhHHHHHHHH--hhh--------c-----chhhHHHH
Q 015377 305 GARMFSMGTFIIANIFAPEIYPTSMR--STGAGVAYAVGRIGGMVCPLVAVGL--VTS--------C-----HQTAAILL 367 (408)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~el~p~~~R--~~a~gi~~~~~~~~~~~~p~~~~~l--~~~--------~-----~~~~~~~~ 367 (408)
..-+..........++.+|+.|.+.| ..+.++.+....+|+++++.+.... .+. . +....|++
T Consensus 123 lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i 202 (477)
T TIGR01301 123 ILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLI 202 (477)
T ss_pred HHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHH
Confidence 11122223334567789999999876 5788888888888888887765432 110 0 12345666
Q ss_pred HHHHHHHHHHHHHhcccccC
Q 015377 368 LEALIVLSVVVILLIPFETK 387 (408)
Q Consensus 368 ~~~~~~i~~~~~~~~~~et~ 387 (408)
-+++.+++.++..+..+|..
T Consensus 203 ~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 203 DIILLAILTYIALSAVKENP 222 (477)
T ss_pred HHHHHHHHHHHHeeeeeccC
Confidence 66777788888888888864
No 202
>PTZ00207 hypothetical protein; Provisional
Probab=98.43 E-value=3.2e-05 Score=76.69 Aligned_cols=125 Identities=11% Similarity=0.139 Sum_probs=74.0
Q ss_pred HHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhh-----hhHHHH-HHHHHHHHHhhhhhhhhhhhcccccCCchhhH
Q 015377 259 GLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ-----SNILLT-ALLSGARMFSMGTFIIANIFAPEIYPTSMRST 332 (408)
Q Consensus 259 g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~el~p~~~R~~ 332 (408)
..+.+|++.||+|||+++..+.++..+..+...... .+.... .............++.......+.|| +.|++
T Consensus 77 ~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~ 155 (591)
T PTZ00207 77 FLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGA 155 (591)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHH
Confidence 455689999999999999988777766544443321 111111 11111112211223344556678897 67999
Q ss_pred HHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccc
Q 015377 333 GAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFE 385 (408)
Q Consensus 333 a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~e 385 (408)
+.|+......+|+.+.+.+...+.. .+....+++.++..++..++.+.+.++
T Consensus 156 a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~l~vl~~vv~ll~~~~vr~ 207 (591)
T PTZ00207 156 VVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFFLMSFALVVGILAIVFMRL 207 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHhheeC
Confidence 9999999999988754444443333 233345566666665555555554433
No 203
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.43 E-value=2.5e-05 Score=74.78 Aligned_cols=138 Identities=14% Similarity=0.127 Sum_probs=77.1
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH---hhh---hhHHHHHHH--HHHHHHhhhhhhhh
Q 015377 246 YINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLV---TLQ---SNILLTALL--SGARMFSMGTFIIA 317 (408)
Q Consensus 246 ~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~--~~~~~~~~~~~~~~ 317 (408)
.....+..+...++.+..|+++||+|||+.++.+.....+...... ... ......... ....+......+..
T Consensus 41 g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 120 (396)
T TIGR00882 41 GIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAI 120 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhH
Confidence 3444556677888999999999999999998765444433222111 111 001110000 11111111112223
Q ss_pred hhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhccccc
Q 015377 318 NIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 386 (408)
Q Consensus 318 ~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et 386 (408)
..+..|.- +.++...|.....+.+|..++|.+.+.+.+ .++..+|.+.+.+.++..+..++..||.
T Consensus 121 ~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 186 (396)
T TIGR00882 121 EAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKPKA 186 (396)
T ss_pred HHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 33334432 223456677888888899999988775544 4566677777777776666666655554
No 204
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.37 E-value=5.5e-05 Score=72.21 Aligned_cols=129 Identities=16% Similarity=0.135 Sum_probs=86.3
Q ss_pred HhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCchhhH
Q 015377 253 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRST 332 (408)
Q Consensus 253 ~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R~~ 332 (408)
.....+..+.+|+++||+|-|+++..+.+..+++.....+..+.....++-+....+ .++....+.+....+|.+.|++
T Consensus 72 ~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~llGva-EA~~~A~~syI~~WfP~kER~r 150 (511)
T TIGR00806 72 PYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFYSVT-MAARIAYSSYIFSLVPPSRYQR 150 (511)
T ss_pred HHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHCCHHHHHH
Confidence 345567788999999999999999988877777666555543322222222222222 2333367788899999999999
Q ss_pred HHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHH--HHHH-HHHHHHHHHHHhcc
Q 015377 333 GAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAI--LLLE-ALIVLSVVVILLIP 383 (408)
Q Consensus 333 a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~--~~~~-~~~~i~~~~~~~~~ 383 (408)
+.|+.++...+|.++++.+.+.+ ...+..... -++. +...++.++.+++|
T Consensus 151 atsi~~sg~~vG~~Ia~~L~qll-~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP 203 (511)
T TIGR00806 151 AAAYSRAAVLLGVFLSSVLGQLL-VTLGWISYSTLNIISLVFMTFSVFLALFLK 203 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HhcCchhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999998888764 334432221 1223 33356666666665
No 205
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.33 E-value=1.2e-05 Score=76.29 Aligned_cols=133 Identities=23% Similarity=0.256 Sum_probs=90.0
Q ss_pred HHHHHHHHHhhh-chHHHHHHHHHHHHHHHHHHHhhh--h-hHHHHHHHHHHHHHhhhhh-hhhhhhcccccCC--chhh
Q 015377 259 GLLTAALLVDRV-GRKLSMTIMFIFVCIFLLPLVTLQ--S-NILLTALLSGARMFSMGTF-IIANIFAPEIYPT--SMRS 331 (408)
Q Consensus 259 g~~~~~~l~dr~-grR~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~el~p~--~~R~ 331 (408)
..+++||++||+ |+|+.++.+.++..+--+.+.... . ....+.+.+.. +..|.+ +....+..|++|. ..|-
T Consensus 77 t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~--iG~Gl~K~NiS~llg~ly~~~DprrD 154 (498)
T COG3104 77 TPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALII--VGTGLFKPNISSLLGELYPKDDPRRD 154 (498)
T ss_pred HHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHH--hccccccccHHHHHHHhcCCCCcccC
Confidence 457899999996 999988887666554333333221 1 11111111111 222332 4566777899976 3378
Q ss_pred HHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCCccccc
Q 015377 332 TGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGKELVN 393 (408)
Q Consensus 332 ~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~~~~~~ 393 (408)
.++++-++..++|++++|++.+++.+..+++..|...++-+.++++..++.++..++....+
T Consensus 155 ~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~ 216 (498)
T COG3104 155 GGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVP 216 (498)
T ss_pred CCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCC
Confidence 89999999999999999999998887777777888888888888777777765555554443
No 206
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.32 E-value=0.00029 Score=67.04 Aligned_cols=110 Identities=21% Similarity=0.207 Sum_probs=90.5
Q ss_pred CcchhHHHHHHHHHHHHHHHHhhhh--hHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCc--chhHHHHHHHHHHHHH
Q 015377 2 EEGRMSILGGALVTFVAGLLSAFSP--NYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSN--RGKWMVVFSTFWTFGS 76 (408)
Q Consensus 2 ~gRr~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~--Rg~~~~~~~~~~~~G~ 76 (408)
.|+|+++.++.++..++-++.+... +...++++=.+.++|.|.. +...+.+.|..|++. |=...+++..+.++|+
T Consensus 89 LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGs 168 (498)
T COG3104 89 LGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGS 168 (498)
T ss_pred cchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHH
Confidence 5999999999999999999888884 7889999999999999986 455667889988855 3344567788899999
Q ss_pred HHHHHHHhHhccccchHHHHHHhhHHHHHHHHHHH
Q 015377 77 VSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIV 111 (408)
Q Consensus 77 ~l~~~l~~~~~~~~~Wr~~f~i~~i~~~~~~~~~~ 111 (408)
+.+|.+...+....+|...|...++-..+.++.++
T Consensus 169 l~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~ 203 (498)
T COG3104 169 LIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFL 203 (498)
T ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988899999999998775555444443
No 207
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.30 E-value=1.6e-05 Score=78.88 Aligned_cols=138 Identities=19% Similarity=0.156 Sum_probs=86.8
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHH-HHHHHHHHHHHhhhhhhhhhhhccccc
Q 015377 247 INVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNIL-LTALLSGARMFSMGTFIIANIFAPEIY 325 (408)
Q Consensus 247 ~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~el~ 325 (408)
.......+++.+|.++.+.++|++|||..++.+.+...+..+......+... ...-.+. .+...+...+...|.+|+-
T Consensus 93 ~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~-G~g~G~~~~~~piy~sEia 171 (513)
T KOG0254|consen 93 LLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILT-GLGVGGASVLAPVYISEIA 171 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHh-ccchhhhhhcchhhHhhcC
Confidence 3444556788899999999999999999998877766554444443332221 1111111 1222233356688999999
Q ss_pred CCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhc--chhhHHHHHHHHHHHHHHHHHhcccccC
Q 015377 326 PTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSC--HQTAAILLLEALIVLSVVVILLIPFETK 387 (408)
Q Consensus 326 p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~et~ 387 (408)
|++.|+.-.+.......+|-.++ ++.+...... ++...+.+..+.+++..+. +++.||+.
T Consensus 172 p~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp 233 (513)
T KOG0254|consen 172 PAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESP 233 (513)
T ss_pred ChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCCh
Confidence 99999999998888777665555 4444444322 3334445555555555555 66667754
No 208
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.29 E-value=9.1e-05 Score=71.03 Aligned_cols=131 Identities=18% Similarity=0.160 Sum_probs=82.3
Q ss_pred hHHHHHHHHHHhhh-----chHH-HHHHHHHHHHHHHHHHHhhh--hhHH-HHHHHHHHHHHhhhhhhhhhhhcccccCC
Q 015377 257 LPGLLTAALLVDRV-----GRKL-SMTIMFIFVCIFLLPLVTLQ--SNIL-LTALLSGARMFSMGTFIIANIFAPEIYPT 327 (408)
Q Consensus 257 ~~g~~~~~~l~dr~-----grR~-~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~el~p~ 327 (408)
.+..++.+.++||. |||+ .+..+.....+.+..+.... .+.. .....+...++.....+....+.+|.+|.
T Consensus 46 ~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~ 125 (402)
T PRK11902 46 YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHP 125 (402)
T ss_pred HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 35678899999999 7876 45555555544443333321 1121 11111122222223335667888999999
Q ss_pred chhhHHHhHHHHhhhHhHhhHHHHHHHHhhh-cchhhHHHHHHHHHHHHHHHHHhcccccCC
Q 015377 328 SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS-CHQTAAILLLEALIVLSVVVILLIPFETKG 388 (408)
Q Consensus 328 ~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~et~~ 388 (408)
+.|+++.++......+|.++++.+...+.+. .++...+.+.++..++..+.. +..||++.
T Consensus 126 ~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~~-~~~~e~~~ 186 (402)
T PRK11902 126 EERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALTT-LWAPEPEV 186 (402)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHHH-HhcCCCcc
Confidence 9999999999988888888888777766654 355667777777666655543 44456543
No 209
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.28 E-value=1.7e-05 Score=76.29 Aligned_cols=133 Identities=17% Similarity=0.165 Sum_probs=76.5
Q ss_pred HhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhh---hh-hHHHHHHHHHHHHHhhhhhhhhhhhcccccCCc
Q 015377 253 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL---QS-NILLTALLSGARMFSMGTFIIANIFAPEIYPTS 328 (408)
Q Consensus 253 ~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~ 328 (408)
.+++++|++.+++++||+|||..+.++.+...+..+..... +. ......-+..+..+ .........|..|+-|.+
T Consensus 70 ~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~-gl~~~~~pmyl~E~sP~~ 148 (485)
T KOG0569|consen 70 FIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLAC-GLSTGLVPMYLTEISPKN 148 (485)
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHh-HHHHHHHHHHHhhcChhh
Confidence 47788999999999999999988877665554433322221 11 11111111111111 122345667889999999
Q ss_pred hhhHHHhHHHHhhhHhHhhHHHHH-HHHhhhcchhhHHH--HHHHHHHHHHHHHHhcccccCC
Q 015377 329 MRSTGAGVAYAVGRIGGMVCPLVA-VGLVTSCHQTAAIL--LLEALIVLSVVVILLIPFETKG 388 (408)
Q Consensus 329 ~R~~a~gi~~~~~~~~~~~~p~~~-~~l~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~et~~ 388 (408)
.|+....+......+|-.++..+. +.+.... ..++++ +..+..++. ++.+.+.||+.+
T Consensus 149 ~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~-~~W~~l~~~~~i~~~~~-l~~l~~~PESPk 209 (485)
T KOG0569|consen 149 LRGALGTLLQIGVVIGILLGQVLGLPSLLGTE-DLWPYLLAFPLIPALLQ-LALLPFLPESPK 209 (485)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHccHHhcCCC-cchHHHHHHHHHHHHHH-HHHHhcCCCCcc
Confidence 999998888877777766663333 3343221 223333 223333444 444555578654
No 210
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.11 E-value=0.0087 Score=56.00 Aligned_cols=73 Identities=12% Similarity=0.208 Sum_probs=51.9
Q ss_pred HHHHHHHhhccCCcch-hhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHhHhcccc-chHHHHHHhhHHH
Q 015377 31 LLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPIL-TWRWLLALSAIPA 103 (408)
Q Consensus 31 l~~~R~l~Gi~~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~~~~~-~Wr~~f~i~~i~~ 103 (408)
..+.-.+.|+|.+... ...++.+|.+|+++|++..++.......|.++++.+...+.+.+ .=|....++..+.
T Consensus 92 a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~ 166 (403)
T PF03209_consen 92 AALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVAL 166 (403)
T ss_pred HHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHH
Confidence 3344446667766654 44567899999999999999998889999999998877666543 4455545554443
No 211
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.09 E-value=5.2e-05 Score=73.44 Aligned_cols=133 Identities=15% Similarity=0.087 Sum_probs=97.9
Q ss_pred HhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh--hhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCchh
Q 015377 253 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT--LQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 330 (408)
Q Consensus 253 ~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R 330 (408)
..+.+++.+.++++.||+|-|+++..+.++.++..+.... ..+.....+.-+...+.....++....+.+.-.|+.-|
T Consensus 83 ~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~Er 162 (466)
T KOG2532|consen 83 FWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPNER 162 (466)
T ss_pred HHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHHhhhhceeeeECCHHHH
Confidence 4667888899999999999999998887777664433332 22222222222333333345567888899999999999
Q ss_pred hHHHhHHHHhhhHhHhhHHHHHHHHhhh-cchhhHHHHHHHHHHHHHHHHHhcccc
Q 015377 331 STGAGVAYAVGRIGGMVCPLVAVGLVTS-CHQTAAILLLEALIVLSVVVILLIPFE 385 (408)
Q Consensus 331 ~~a~gi~~~~~~~~~~~~p~~~~~l~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~e 385 (408)
++..++.++...+|.+++-.+.+.+-+. .|+...|++++++.++..++.+++..|
T Consensus 163 s~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d 218 (466)
T KOG2532|consen 163 STFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSD 218 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999998886677877776 777888999998887776666665544
No 212
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.08 E-value=3.5e-05 Score=78.03 Aligned_cols=131 Identities=10% Similarity=0.100 Sum_probs=83.3
Q ss_pred HhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhh----------------------------h---------
Q 015377 253 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ----------------------------S--------- 295 (408)
Q Consensus 253 ~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~----------------------------~--------- 295 (408)
.++..++.++.+++.||.|||+.+.++.++.++..+.....+ +
T Consensus 78 ~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~ 157 (633)
T TIGR00805 78 EIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQ 157 (633)
T ss_pred hHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccc
Confidence 355566778899999999999988776666554333222110 0
Q ss_pred --------h--HHHHHHHHHHH----HHhhhhhhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhc--
Q 015377 296 --------N--ILLTALLSGAR----MFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSC-- 359 (408)
Q Consensus 296 --------~--~~~~~~~~~~~----~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~-- 359 (408)
. .....+++... +.....++....+..|.+|++.|+...|+.+....+|..+++.+.+.+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d 237 (633)
T TIGR00805 158 CPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVD 237 (633)
T ss_pred cccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccc
Confidence 0 00111111222 2222334567788999999999999999999999999999988877655321
Q ss_pred -------------------c-hhhHHHHHHHHHHHHHHHHHhcc
Q 015377 360 -------------------H-QTAAILLLEALIVLSVVVILLIP 383 (408)
Q Consensus 360 -------------------~-~~~~~~~~~~~~~i~~~~~~~~~ 383 (408)
+ +...|++.+++.++.++..++++
T Consensus 238 ~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p 281 (633)
T TIGR00805 238 TGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFP 281 (633)
T ss_pred cccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 0 23356777777766665555554
No 213
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.07 E-value=0.00036 Score=66.46 Aligned_cols=120 Identities=15% Similarity=0.124 Sum_probs=68.5
Q ss_pred HHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHH-HHHHHHH-hhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCC
Q 015377 250 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVC-IFLLPLV-TLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPT 327 (408)
Q Consensus 250 ~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~ 327 (408)
....+...++.++.+.++||.|||........... +...... ..++.+...........+.....+....+..|. .
T Consensus 46 s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~ 123 (382)
T TIGR00902 46 GAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--Q 123 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--H
Confidence 34456667788899999999998654422221111 1111111 122222221111111122222334455554442 4
Q ss_pred chhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHH
Q 015377 328 SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEAL 371 (408)
Q Consensus 328 ~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~ 371 (408)
+.|+++.|.....+.+|.+++|.+.+.+.+..++...+.+....
T Consensus 124 ~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~ 167 (382)
T TIGR00902 124 KQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAG 167 (382)
T ss_pred HHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHH
Confidence 67899999999999999999999888888776665555555444
No 214
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.03 E-value=1e-06 Score=86.97 Aligned_cols=89 Identities=15% Similarity=0.220 Sum_probs=2.9
Q ss_pred HHHHHHHHHHhhccCCcch-hhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHhHhcc------------------
Q 015377 28 YISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMP------------------ 88 (408)
Q Consensus 28 ~~~l~~~R~l~Gi~~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~~~------------------ 88 (408)
+..|+++.++.|+|..... ...+|+=|.+++++-+...++......+|.++|.+++.....
T Consensus 141 ~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~ 220 (539)
T PF03137_consen 141 FYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPS 220 (539)
T ss_dssp -----------SSS------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCC
Confidence 4669999999999988764 567799999999999999999999998998888877765321
Q ss_pred ccc----hHHHHHHhhHHHHHHHHHHHhccCc
Q 015377 89 ILT----WRWLLALSAIPAFVLLIFIVFMPES 116 (408)
Q Consensus 89 ~~~----Wr~~f~i~~i~~~~~~~~~~~lpES 116 (408)
+.. |-.-|.+.++..++..+..+++|++
T Consensus 221 dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~ 252 (539)
T PF03137_consen 221 DPRWVGAWWLGFLICGILLFLSAIPLFFFPKK 252 (539)
T ss_dssp --------------------------------
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 012 5555555555555555556666655
No 215
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=97.99 E-value=0.00025 Score=68.69 Aligned_cols=138 Identities=19% Similarity=0.144 Sum_probs=78.1
Q ss_pred HHHHhhhhHHHHHHHHHHhh----hchHHH-HHHHHHHHHHHHHHHHhhhh----hHHHHHHH--HHHHHHhhhhhhhhh
Q 015377 250 FITSFAELPGLLTAALLVDR----VGRKLS-MTIMFIFVCIFLLPLVTLQS----NILLTALL--SGARMFSMGTFIIAN 318 (408)
Q Consensus 250 ~~~~~~~~~g~~~~~~l~dr----~grR~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~--~~~~~~~~~~~~~~~ 318 (408)
.+..+...+..++.|.++|| +|||+. ++.+.....+....+....+ ........ ...............
T Consensus 42 ~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (437)
T TIGR00792 42 LVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYITYILLGLFYSFVNIPYW 121 (437)
T ss_pred HHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcccHh
Confidence 34446667788999999998 677554 44554444444333332211 11111111 111111111122335
Q ss_pred hhccccc-CCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhh-------cchhhHHHHHHHHHHHHHHHHHhcccccC
Q 015377 319 IFAPEIY-PTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS-------CHQTAAILLLEALIVLSVVVILLIPFETK 387 (408)
Q Consensus 319 ~~~~el~-p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~-------~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 387 (408)
.+.+|+. +.+.|++..++....+.+|+.+++.+.+.+... .++...+.+++++.++..++..+..||.+
T Consensus 122 al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~ 198 (437)
T TIGR00792 122 SLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERY 198 (437)
T ss_pred hCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecC
Confidence 6778887 467899999998888888887776665544432 22334566667776666666666666754
No 216
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.98 E-value=8.9e-05 Score=71.59 Aligned_cols=138 Identities=20% Similarity=0.143 Sum_probs=98.0
Q ss_pred HhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCchhhH
Q 015377 253 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRST 332 (408)
Q Consensus 253 ~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R~~ 332 (408)
++..++.+..-|.++||.|||..+....+.+.+-.....+.. ++... ...........++....+.++.-..+.|..
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~--~~~~~-~~~l~g~~~~~~s~~~a~vadis~~~~R~~ 148 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG--YWFFL-LLGLSGGFSAIFSVGFAYVADISSEEERSS 148 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH--HHHhh-hcccccchhhhhhhhhhheeeccchhHHHH
Confidence 344566677889999999999998876665544322222211 21111 111111123445667888999999999999
Q ss_pred HHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCCccccc
Q 015377 333 GAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGKELVN 393 (408)
Q Consensus 333 a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~~~~~~ 393 (408)
+.|+.+..-+.+..++|.....+.+..+....+.+-.+..++..+...+..||+...+.++
T Consensus 149 ~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~ 209 (463)
T KOG2816|consen 149 SIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERS 209 (463)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCccccc
Confidence 9999999888888899988887777766667777777888888889999999987765554
No 217
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=97.96 E-value=0.00015 Score=71.11 Aligned_cols=129 Identities=16% Similarity=0.078 Sum_probs=91.4
Q ss_pred hhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHH-HHHHHHHHhhhhhhhhhhhcccccCCchhhHH
Q 015377 255 AELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTA-LLSGARMFSMGTFIIANIFAPEIYPTSMRSTG 333 (408)
Q Consensus 255 ~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~el~p~~~R~~a 333 (408)
+......+.+.+.||+|.|.+.+++.+++++.+....+..+-+.... +-....+.....+...-++....| .+.|+.|
T Consensus 93 ~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF-~kkR~lA 171 (509)
T KOG2504|consen 93 VYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYF-EKKRALA 171 (509)
T ss_pred HHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHh-HHHHHHH
Confidence 34455678889999999999999998888776666555554222111 111111111112233344445555 5669999
Q ss_pred HhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhccc
Q 015377 334 AGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPF 384 (408)
Q Consensus 334 ~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 384 (408)
.|++..-..+|.++-|.+...+++..|+....++++.+++-+++....+.|
T Consensus 172 ~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 172 TGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred HhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999988888888888888999999998888888888877
No 218
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=97.88 E-value=0.0014 Score=62.47 Aligned_cols=138 Identities=14% Similarity=0.065 Sum_probs=74.2
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHH-HHHHHHHHHHHhh-hhhHHHHHHHHHHHHHhhhhhhhhhhhccc
Q 015377 246 YINVFITSFAELPGLLTAALLVDRVGRKLSMTIMF-IFVCIFLLPLVTL-QSNILLTALLSGARMFSMGTFIIANIFAPE 323 (408)
Q Consensus 246 ~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 323 (408)
.....+..+..+++.++.+.++||.|||....-.. ....+........ ++.+.................+....+..+
T Consensus 42 G~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~ 121 (382)
T PRK11128 42 GLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFAVAFWFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANT 121 (382)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHcccccHHHHHHHH
Confidence 33444455667788889999999999853221111 1111111111111 222221111111222222233444444444
Q ss_pred ccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhccccc
Q 015377 324 IYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 386 (408)
Q Consensus 324 l~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et 386 (408)
. .+.|+.+.|.....+.+|..++|.+.+.+.+..++...+.+.++..++..+. .+..||.
T Consensus 122 ~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~~-~~~~~~~ 181 (382)
T PRK11128 122 W--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLLG-QLLRPTI 181 (382)
T ss_pred H--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHH-HHccCCC
Confidence 3 3457888888888889999999999888877766666666555544444333 3344554
No 219
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.87 E-value=0.002 Score=59.78 Aligned_cols=141 Identities=19% Similarity=0.132 Sum_probs=88.4
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH---hhhhhHHHHHHHHHHHHHhhhhhhhhhhhccccc
Q 015377 249 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLV---TLQSNILLTALLSGARMFSMGTFIIANIFAPEIY 325 (408)
Q Consensus 249 ~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~ 325 (408)
.+....+...+.+..+++.||+|+|.-++.++.+..+.+.... ...+-......++.........-+....+...+.
T Consensus 54 qfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg 133 (422)
T COG0738 54 QFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLG 133 (422)
T ss_pred HHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhC
Confidence 3444456677888899999999999999888777665443332 1111111111122221111122245566778889
Q ss_pred CCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhh-------------------cchhhHHHHHHHHHHHHHHHHHhcc-cc
Q 015377 326 PTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS-------------------CHQTAAILLLEALIVLSVVVILLIP-FE 385 (408)
Q Consensus 326 p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~-------------------~~~~~~~~~~~~~~~i~~~~~~~~~-~e 385 (408)
|.+..+.=.++...+..+|++++|.+...++.+ .....+|..++...++..+.....+ ||
T Consensus 134 ~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~ 213 (422)
T COG0738 134 KPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPD 213 (422)
T ss_pred CchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCc
Confidence 888788888999999999999999988877662 1234577777766655555544443 55
Q ss_pred cCCc
Q 015377 386 TKGK 389 (408)
Q Consensus 386 t~~~ 389 (408)
.+..
T Consensus 214 ~~~~ 217 (422)
T COG0738 214 LQVA 217 (422)
T ss_pred CCcc
Confidence 4443
No 220
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.86 E-value=5.5e-07 Score=87.73 Aligned_cols=106 Identities=18% Similarity=0.182 Sum_probs=70.5
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhh---hhHHHHHHHHHHHHHhhhhhhhhhhhccc
Q 015377 247 INVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ---SNILLTALLSGARMFSMGTFIIANIFAPE 323 (408)
Q Consensus 247 ~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 323 (408)
.......++.++|++++|+++||+|||+.+..+..+..+..+...... +.......-+...+...+.......+..|
T Consensus 50 ~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E 129 (451)
T PF00083_consen 50 LLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISE 129 (451)
T ss_pred HHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 334455678889999999999999999988877666554443333322 22222111122222223345677889999
Q ss_pred ccCCchhhHHHhHHHHhhhHhHhhHHHHH
Q 015377 324 IYPTSMRSTGAGVAYAVGRIGGMVCPLVA 352 (408)
Q Consensus 324 l~p~~~R~~a~gi~~~~~~~~~~~~p~~~ 352 (408)
..|++.|+...++......+|.+++..+.
T Consensus 130 ~~~~~~R~~~~~~~~~~~~~G~~~~~~~~ 158 (451)
T PF00083_consen 130 IAPPKHRGFLSSLFQLFWALGILLASLIG 158 (451)
T ss_pred ccccccccccccccccccccccccccccc
Confidence 99999999998888887777776666544
No 221
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=97.86 E-value=0.0015 Score=62.36 Aligned_cols=123 Identities=22% Similarity=0.138 Sum_probs=72.4
Q ss_pred HHHHhhhchHHHHHHHHHH-HHHHHHHHHh---hhh-hHHHHHHHHHHHHHhhhhhhhhhhhcccccCCchhhHHHhHHH
Q 015377 264 ALLVDRVGRKLSMTIMFIF-VCIFLLPLVT---LQS-NILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAY 338 (408)
Q Consensus 264 ~~l~dr~grR~~~~~~~~~-~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~ 338 (408)
.+..||.|||+..+....+ ...+...+.. ... ............++..........+..|..+.+.++.+.+...
T Consensus 60 ~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~ 139 (390)
T TIGR02718 60 NWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQI 139 (390)
T ss_pred ccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHH
Confidence 5567788998886554322 2212222221 111 1111111111112222222445556788888888888877777
Q ss_pred HhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhccccc
Q 015377 339 AVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 386 (408)
Q Consensus 339 ~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et 386 (408)
....+|..+++.....+.+..++..+|.+.++..++..+..++++||+
T Consensus 140 ~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~~~~ 187 (390)
T TIGR02718 140 AGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWLKDRA 187 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 766788888887777777766777788888888777777766666554
No 222
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.78 E-value=0.00068 Score=59.79 Aligned_cols=132 Identities=17% Similarity=0.135 Sum_probs=72.7
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhh------hHHHHHHHHHHHHHhhhh-hhhhhhhc
Q 015377 249 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQS------NILLTALLSGARMFSMGT-FIIANIFA 321 (408)
Q Consensus 249 ~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~~~~~~~ 321 (408)
.....++.-.| +..|.+.|+.|.|.++.++.....+-...+..... +.+...+........... .+....-.
T Consensus 43 ~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~ 121 (250)
T PF06813_consen 43 STAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTC 121 (250)
T ss_pred HHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHH
Confidence 33444555554 78899999999999998877766554433322111 111211111111111111 12333445
Q ss_pred ccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHH-HHHHHHHHhcc
Q 015377 322 PEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALI-VLSVVVILLIP 383 (408)
Q Consensus 322 ~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~-~i~~~~~~~~~ 383 (408)
.+.||. .|+++.|+.-+...+++.+-..+...+... +....+++.+... +++.+...+..
T Consensus 122 ~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f~~-~~~~fll~la~~~~~v~l~~~~~vr 182 (250)
T PF06813_consen 122 VRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFFGD-DPSSFLLFLAVLPAVVCLVAMFFVR 182 (250)
T ss_pred HHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHcCC-ChHHHHHHHHHHHHHHHHHHhhhee
Confidence 589985 699999999999988877777666554432 2222333344333 34444444443
No 223
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.77 E-value=0.018 Score=55.27 Aligned_cols=81 Identities=12% Similarity=0.030 Sum_probs=54.4
Q ss_pred cchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcchhh-hHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHH
Q 015377 3 EGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVF-FSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAA 81 (408)
Q Consensus 3 gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~~~~-~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~ 81 (408)
|.|..+.++...+...... -+-+|-+.+++.-.+.|+|.+...+. ..|++|..+++.+.+..++.=.....+.+.|+.
T Consensus 78 ~~K~~lv~ga~~y~~f~~g-fl~~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~tie~Nisi~Wai~~~~li~Ggi 156 (461)
T KOG3098|consen 78 GPKWALVIGATCYAAFPLG-FLFPNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRETIERNISIFWAIGQSSLIIGGI 156 (461)
T ss_pred hHHHHHHHHhHHHHHHHHH-HHhcchHHHHHHHHHhhhhHHheecccceehhhcCChhhHHHHHHHHHHHHHHHHHhhhH
Confidence 5566666666665544432 23356677888999999998875544 458899999999998887655555555555554
Q ss_pred HHh
Q 015377 82 LAW 84 (408)
Q Consensus 82 l~~ 84 (408)
+-.
T Consensus 157 ~l~ 159 (461)
T KOG3098|consen 157 ILF 159 (461)
T ss_pred hhe
Confidence 433
No 224
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.74 E-value=0.0015 Score=63.98 Aligned_cols=125 Identities=16% Similarity=0.170 Sum_probs=71.1
Q ss_pred HHHHHHHhhhc-----hHHHHHHHHHHHH-HHHHHHHhhhhh-HHHHHHHHHHHHHhhhhhhhhhhhcccccCCchhhHH
Q 015377 261 LTAALLVDRVG-----RKLSMTIMFIFVC-IFLLPLVTLQSN-ILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTG 333 (408)
Q Consensus 261 ~~~~~l~dr~g-----rR~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R~~a 333 (408)
.+.|.++||++ ||+.++.+.++.+ +....+....+. ......++...++....-...-.+..|..+ +.+..+
T Consensus 78 ~l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~ 156 (468)
T TIGR00788 78 PFAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAG 156 (468)
T ss_pred HHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcC
Confidence 44899999996 6666666655542 222222211221 122212223323222233456777889988 544443
Q ss_pred ---HhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccC
Q 015377 334 ---AGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 387 (408)
Q Consensus 334 ---~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~ 387 (408)
.+..+....+|..+++.+.+.+.+..++...+.+.++..++..+. .++.||.+
T Consensus 157 ~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~-~~~~~E~~ 212 (468)
T TIGR00788 157 PSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFV-SNLSKERR 212 (468)
T ss_pred CCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHH-HHhccccc
Confidence 334444445788888888887777666666777777777666444 44556765
No 225
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.61 E-value=0.00075 Score=65.79 Aligned_cols=140 Identities=17% Similarity=0.166 Sum_probs=100.6
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCc
Q 015377 249 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTS 328 (408)
Q Consensus 249 ~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~ 328 (408)
..+..++.++|.+.++.+.||+.-.+.+..+.+..+++.......++-....++-+...++-.+.++....+.+--|..+
T Consensus 87 ~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~ 166 (495)
T KOG2533|consen 87 DTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKS 166 (495)
T ss_pred HHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChh
Confidence 34445778889999999999999666665554444443322222333333333333444455566788888999999999
Q ss_pred hhhHHHhHHHHhhhHhHhhHHHHHHHHhh------hcchhhHHHHHHHHHHHHHHHHHhcccccCC
Q 015377 329 MRSTGAGVAYAVGRIGGMVCPLVAVGLVT------SCHQTAAILLLEALIVLSVVVILLIPFETKG 388 (408)
Q Consensus 329 ~R~~a~gi~~~~~~~~~~~~p~~~~~l~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~ 388 (408)
.|++-.|+-++.+.+|+++++++...+.+ ..++.+.|++-|+++++.+++++++.|+-..
T Consensus 167 e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 167 ERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred hhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChh
Confidence 99999999999999999999999876532 2345578899999999998888888877544
No 226
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.54 E-value=0.055 Score=51.12 Aligned_cols=103 Identities=22% Similarity=0.197 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcchhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHhHhcc
Q 015377 9 LGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMP 88 (408)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~~~ 88 (408)
.+..+++.++-++.++++|...=+++-.+.|++.|.+-+...=++...|+. ..+.+..+...+.++|+..-..+.+
T Consensus 93 ~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~~y~~~----~l~~wssGTG~aGl~Ga~~y~~lT~ 168 (402)
T PF02487_consen 93 LICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTHFYGKS----SLSAWSSGTGGAGLVGALYYLGLTT 168 (402)
T ss_pred HHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHHhcCcc----ccccccCCcChhhHHHHHHHHHHHH
Confidence 444556677778889999999888888899988886533322123455543 3455555566666666654443333
Q ss_pred ccch--HHHHHHhhHHHHHHHH-HHHhccCc
Q 015377 89 ILTW--RWLLALSAIPAFVLLI-FIVFMPES 116 (408)
Q Consensus 89 ~~~W--r~~f~i~~i~~~~~~~-~~~~lpES 116 (408)
.++ |..+.+....+++..+ .++.+|.+
T Consensus 169 -~g~s~~~tll~~~~lp~~~~~~~f~~L~~~ 198 (402)
T PF02487_consen 169 -LGLSPRTTLLIMLVLPAIFLLSYFFLLPSP 198 (402)
T ss_pred -hCcCHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 443 6666665544444433 44455543
No 227
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.54 E-value=0.0014 Score=61.83 Aligned_cols=95 Identities=15% Similarity=0.027 Sum_probs=61.5
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHh--hhhhH-HHHHHHHHH----HHHhhhhhhhhhhhc
Q 015377 249 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT--LQSNI-LLTALLSGA----RMFSMGTFIIANIFA 321 (408)
Q Consensus 249 ~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~ 321 (408)
..+..++.+.|.++.|++.||+|||++....+++..++...... ..+.. ..+..++.. .+...+=++..-+++
T Consensus 90 n~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~ 169 (538)
T KOG0252|consen 90 NAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIM 169 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHh
Confidence 34445777899999999999999999887665555444333222 22222 111122222 222233468889999
Q ss_pred ccccCCchhhHHHhHHHHhhhH
Q 015377 322 PEIYPTSMRSTGAGVAYAVGRI 343 (408)
Q Consensus 322 ~el~p~~~R~~a~gi~~~~~~~ 343 (408)
+|.-..+.|++-.+...++..+
T Consensus 170 SE~an~~~RGa~iaavFa~Qg~ 191 (538)
T KOG0252|consen 170 SESANKKTRGAFIAAVFAMQGF 191 (538)
T ss_pred hhhhhhccccceeEEEEEecch
Confidence 9999999999888877776544
No 228
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=97.50 E-value=0.005 Score=58.32 Aligned_cols=141 Identities=19% Similarity=0.213 Sum_probs=66.7
Q ss_pred hHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH---h---hhhhHHHHHHHHHHHHHhhhhhhhh
Q 015377 244 SVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLV---T---LQSNILLTALLSGARMFSMGTFIIA 317 (408)
Q Consensus 244 ~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (408)
+........++..++...+.|.++||+|.|+-++....+..+...+.. + .+.+..... +....+......+..
T Consensus 44 ~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~-iig~i~l~~~f~~~~ 122 (412)
T PF01306_consen 44 EIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGA-IIGGIYLGLVFNAGV 122 (412)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHH-HHTTTTTTTTTTTHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcccc
Confidence 334444445566777888999999999977665543333222211111 1 111111111 111111111111111
Q ss_pred hhhcccccCC---chhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCC
Q 015377 318 NIFAPEIYPT---SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKG 388 (408)
Q Consensus 318 ~~~~~el~p~---~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~ 388 (408)
.+ .|.+-. +..+.-+|=....|.+|-.++..+.+.+.+ .+++..+.+.....++..++..+..||...
T Consensus 123 ~~--~Ea~~er~sr~~~feYG~~R~wGSig~ai~s~~~G~L~~-i~p~~~fwi~s~~~~il~lll~~~~~~~~~ 193 (412)
T PF01306_consen 123 PL--SEAYAERVSRRNGFEYGRARMWGSIGFAIASLLAGILFN-INPNIIFWIASAAAIILLLLLLLLKPDVPP 193 (412)
T ss_dssp HH--HHHHHHHHHHHHSS-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHSS---SSS
T ss_pred hH--HHHHHHHHHHHhcCCcchHHHHhhHHHHHHHHHhheeee-eCccHHHHHHHHHHHHHHHHHHHcCCcCch
Confidence 11 133322 223455666777888888888888887765 344444444344444455555556555433
No 229
>PRK09669 putative symporter YagG; Provisional
Probab=97.50 E-value=0.0013 Score=64.07 Aligned_cols=136 Identities=15% Similarity=0.117 Sum_probs=72.3
Q ss_pred HHHHhhhhHHHHHHHHHHhh----hchHHHHH-HHHHHHHHHHHHHHhhh----hhHHHHHHH--HHHHHHhhhhhhhhh
Q 015377 250 FITSFAELPGLLTAALLVDR----VGRKLSMT-IMFIFVCIFLLPLVTLQ----SNILLTALL--SGARMFSMGTFIIAN 318 (408)
Q Consensus 250 ~~~~~~~~~g~~~~~~l~dr----~grR~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~--~~~~~~~~~~~~~~~ 318 (408)
.+.-+...+..++.|.++|| +|||+..+ .+....++......... ......... .....+.........
T Consensus 52 ~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~ 131 (444)
T PRK09669 52 LVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYC 131 (444)
T ss_pred HHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHH
Confidence 33345556677888999998 67765544 44444444333222211 111111111 111111122223345
Q ss_pred hhccccc-CCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcc-------hhhHHHHHHHHHHHHHHHHHhcccc
Q 015377 319 IFAPEIY-PTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH-------QTAAILLLEALIVLSVVVILLIPFE 385 (408)
Q Consensus 319 ~~~~el~-p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~-------~~~~~~~~~~~~~i~~~~~~~~~~e 385 (408)
.+.+|+. +.+.|.+..+.....+.+|+.+++.+...+....+ ....+.+++++++++.++.++..+|
T Consensus 132 al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e 206 (444)
T PRK09669 132 AMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFFMTKE 206 (444)
T ss_pred HhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhCCeEE
Confidence 6778887 44779998898888888888777765544433221 1224455566665655555555444
No 230
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.43 E-value=0.0013 Score=59.43 Aligned_cols=103 Identities=28% Similarity=0.385 Sum_probs=77.5
Q ss_pred cchhHHHHHHHHHHHHHHHHhhhhh--HHHHHHHHHHhhccCCcc-hhhhHHHhhhcCC-CcchhHHHHHHH-HHHHHHH
Q 015377 3 EGRMSILGGALVTFVAGLLSAFSPN--YISLLILRGLAGAGLGSG-HVFFSWFMEFVPP-SNRGKWMVVFST-FWTFGSV 77 (408)
Q Consensus 3 gRr~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~-~~Rg~~~~~~~~-~~~~G~~ 77 (408)
|||+.+..+......+.+..++..+ ...+++.|+..|++.|.. +....++.|+.|+ ++|+...+.... ...+|.+
T Consensus 67 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (338)
T COG0477 67 GRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLA 146 (338)
T ss_pred cchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHH
Confidence 8888888887765666677777776 999999999999998865 4566788999998 778888888777 5777888
Q ss_pred HHHHHHhHhcc--ccchHHHHHHhhHHHHH
Q 015377 78 SEAALAWIVMP--ILTWRWLLALSAIPAFV 105 (408)
Q Consensus 78 l~~~l~~~~~~--~~~Wr~~f~i~~i~~~~ 105 (408)
+++.++..+.. ..+||+.|.+.......
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (338)
T COG0477 147 LGPLLAGLLLGALLWGWRAAFLLAALLGLL 176 (338)
T ss_pred HHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 87766554432 46899977766655433
No 231
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=97.41 E-value=0.00097 Score=60.40 Aligned_cols=104 Identities=15% Similarity=0.284 Sum_probs=72.9
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHhhccCCcchhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHhHhccc--cch
Q 015377 15 TFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPI--LTW 92 (408)
Q Consensus 15 ~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~~~~--~~W 92 (408)
......+--+.++...+=+.-+.-|...++...-++|+-+..+|+++.++.+-.....-.|...+..++..+.+. .++
T Consensus 82 ~v~~w~~lv~g~sV~~mQvlE~FyG~~tAaEIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy 161 (433)
T KOG3810|consen 82 GVPVWIMLVFGPSVKAMQVLEFFYGPATAAEIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSY 161 (433)
T ss_pred hhHHHHHHHhcCCchheeeehhhcChHHHHHHhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccch
Confidence 344445556667777777777777777777666677888899999999999999888888888888888776543 345
Q ss_pred HHHHHHhhHHHHHHHHHHHhccCcch
Q 015377 93 RWLLALSAIPAFVLLIFIVFMPESPR 118 (408)
Q Consensus 93 r~~f~i~~i~~~~~~~~~~~lpESp~ 118 (408)
+.+=.+...-..+......++|.-||
T Consensus 162 ~~LN~ISL~~~~ia~~~A~fLP~v~r 187 (433)
T KOG3810|consen 162 TTLNYISLAEVTIAVLLALFLPRVKR 187 (433)
T ss_pred hhhchhhHHHHHHHHHHHhhCCCCch
Confidence 55555554444444555667776653
No 232
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.41 E-value=0.0019 Score=62.05 Aligned_cols=132 Identities=11% Similarity=0.120 Sum_probs=84.8
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCc
Q 015377 249 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTS 328 (408)
Q Consensus 249 ~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~ 328 (408)
..+.-.+.++..+..+.+++|+|+-+++..++.....=++.+.+.++.|....+=+.........+.....|.+...|++
T Consensus 412 ~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~ 491 (618)
T KOG3762|consen 412 SALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPG 491 (618)
T ss_pred hhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCc
Confidence 34445778888999999999999999988876666555555555666654433333333333345566777889999999
Q ss_pred hhhHHHhHHHHhhh-HhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHH
Q 015377 329 MRSTGAGVAYAVGR-IGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVIL 380 (408)
Q Consensus 329 ~R~~a~gi~~~~~~-~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 380 (408)
.|+++.|+.-..-. +|-.++.++.+.++...+....|-++++.|++.++...
T Consensus 492 l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~ 544 (618)
T KOG3762|consen 492 LRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFI 544 (618)
T ss_pred chHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHH
Confidence 99999998876532 33334444444444444544556666666555444433
No 233
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.39 E-value=0.0068 Score=61.01 Aligned_cols=89 Identities=12% Similarity=0.183 Sum_probs=66.8
Q ss_pred HHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHhHhcc----c-----------c--
Q 015377 29 ISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMP----I-----------L-- 90 (408)
Q Consensus 29 ~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~~~----~-----------~-- 90 (408)
..++.+-++.|+|.-.. +...+|+=|...+++-....++....-.+|.++|.+++.+... . .
T Consensus 238 llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrW 317 (735)
T KOG3626|consen 238 LLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRW 317 (735)
T ss_pred HHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcch
Confidence 46888899999987765 4557788899999999999999998888888888887776421 1 0
Q ss_pred --chHHHHHHhhHHHHHHHHHHHhccCcc
Q 015377 91 --TWRWLLALSAIPAFVLLIFIVFMPESP 117 (408)
Q Consensus 91 --~Wr~~f~i~~i~~~~~~~~~~~lpESp 117 (408)
-|..=|++.+...++..+..+++|...
T Consensus 318 IGAWWlGFLi~g~~~~~~a~p~f~fPk~l 346 (735)
T KOG3626|consen 318 IGAWWLGFLICGALLLFSAVPLFFFPKEL 346 (735)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCcccC
Confidence 266666677776666667777777654
No 234
>PF13347 MFS_2: MFS/sugar transport protein
Probab=97.39 E-value=0.00083 Score=65.01 Aligned_cols=131 Identities=18% Similarity=0.120 Sum_probs=76.2
Q ss_pred hhhHHHHHHHHHHh----hhchHHHHH-HHHHHHHHHHHHHHhh-h---hh--HHHHHH--HHHHHHHhhhhhhhhhhhc
Q 015377 255 AELPGLLTAALLVD----RVGRKLSMT-IMFIFVCIFLLPLVTL-Q---SN--ILLTAL--LSGARMFSMGTFIIANIFA 321 (408)
Q Consensus 255 ~~~~g~~~~~~l~d----r~grR~~~~-~~~~~~~~~~~~~~~~-~---~~--~~~~~~--~~~~~~~~~~~~~~~~~~~ 321 (408)
...+-.++.|.++| |+|||+..+ .+....++....+... . +. ...... ..+...+.........++.
T Consensus 49 ~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~ 128 (428)
T PF13347_consen 49 WDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALI 128 (428)
T ss_pred hhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcC
Confidence 33444457788899 789887765 4555555544444322 1 11 111111 1111111122223446788
Q ss_pred ccccCC-chhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcc-------hhhHHHHHHHHHHHHHHHHHhcccc
Q 015377 322 PEIYPT-SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH-------QTAAILLLEALIVLSVVVILLIPFE 385 (408)
Q Consensus 322 ~el~p~-~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~-------~~~~~~~~~~~~~i~~~~~~~~~~e 385 (408)
+|+.+. +.|....+....++.+|+.+...+.+.+.+..+ ......+++++.+++.++..+..+|
T Consensus 129 ~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 129 PELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred ccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeee
Confidence 999985 689999999999888888766666665543322 2334456666767777777777777
No 235
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.37 E-value=0.028 Score=51.81 Aligned_cols=115 Identities=20% Similarity=0.234 Sum_probs=68.0
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcch-hhhHHH-hhhcCCCcchhHHH-HHHHHHHHH--
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWF-MEFVPPSNRGKWMV-VFSTFWTFG-- 75 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~~-~~~~~~-~E~~p~~~Rg~~~~-~~~~~~~~G-- 75 (408)
|.|||+.-++..++++++.+ +-..+++..++++|++.|++..... +.=+|+ .|.-..+.+....+ .+.....++
T Consensus 95 ~~Grk~~cl~~cily~~scl-~k~~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~ 173 (354)
T PF05631_consen 95 RYGRKKACLLFCILYSLSCL-TKHSSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNG 173 (354)
T ss_pred hcCchHHHHHHHHHHHHHHH-HHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhH
Confidence 57999999888888888775 5666899999999999999987654 444564 57643332222222 222111122
Q ss_pred --HHHHHHHHhHhccccch--HHHHHHhhHHHHHHH-HHHHhccCc
Q 015377 76 --SVSEAALAWIVMPILTW--RWLLALSAIPAFVLL-IFIVFMPES 116 (408)
Q Consensus 76 --~~l~~~l~~~~~~~~~W--r~~f~i~~i~~~~~~-~~~~~lpES 116 (408)
.+.+.+++-.+.+..+. ..+|........+.. ++....+|+
T Consensus 174 ~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~EN 219 (354)
T PF05631_consen 174 VVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPEN 219 (354)
T ss_pred HHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhccccc
Confidence 23333344444443333 667777665544443 334445554
No 236
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=97.33 E-value=0.0024 Score=62.31 Aligned_cols=114 Identities=15% Similarity=0.181 Sum_probs=89.5
Q ss_pred Ccch--hHHHHHHHHHHHHHHHHhh--------hhhHHHHHHHHHHhhccCCcch-hhhHHHhhhcCCCcchhHHHHHHH
Q 015377 2 EEGR--MSILGGALVTFVAGLLSAF--------SPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFST 70 (408)
Q Consensus 2 ~gRr--~~~~~~~~~~~~~~~~~~~--------~~~~~~l~~~R~l~Gi~~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~ 70 (408)
.|-| +++++++.++.+..+...+ .++-+.+.+.=++.|+..|+.. ..-++++|..|+++.+...+++..
T Consensus 344 ~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i 423 (477)
T PF11700_consen 344 FGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAI 423 (477)
T ss_pred hCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHH
Confidence 5666 8888888888766665555 5777889999999999999874 455689999999999999999999
Q ss_pred HHHHHHHHHHHHHhHhcccc-chHHHHHHhhHHHHHHHHHHHhccC
Q 015377 71 FWTFGSVSEAALAWIVMPIL-TWRWLLALSAIPAFVLLIFIVFMPE 115 (408)
Q Consensus 71 ~~~~G~~l~~~l~~~~~~~~-~Wr~~f~i~~i~~~~~~~~~~~lpE 115 (408)
.--..+.++|++...+.+.. +-|+-+....+..++.+++.+++++
T Consensus 424 ~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~~ 469 (477)
T PF11700_consen 424 TGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFVDV 469 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccc
Confidence 99999999999887776544 4788777766666665555566554
No 237
>PRK11462 putative transporter; Provisional
Probab=97.31 E-value=0.014 Score=57.08 Aligned_cols=132 Identities=14% Similarity=0.104 Sum_probs=73.0
Q ss_pred hhhhHHHHHHHHHHhh----hchHHHHHH-HHHHHHHHHHHHHhhh----hhHHHHHHHH--HHHHHhhhhhhhhhhhcc
Q 015377 254 FAELPGLLTAALLVDR----VGRKLSMTI-MFIFVCIFLLPLVTLQ----SNILLTALLS--GARMFSMGTFIIANIFAP 322 (408)
Q Consensus 254 ~~~~~g~~~~~~l~dr----~grR~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 322 (408)
+...+.-.+.|.++|| +|||+..+. +....++....+.... .......... ....+........+++.+
T Consensus 56 i~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~ 135 (460)
T PRK11462 56 ALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGG 135 (460)
T ss_pred HHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 4445667788999997 588766654 4444444433332211 1111111111 111111222233466788
Q ss_pred cccC-CchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcc-------hhhHHHHHHHHHHHHHHHHHhcccc
Q 015377 323 EIYP-TSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH-------QTAAILLLEALIVLSVVVILLIPFE 385 (408)
Q Consensus 323 el~p-~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~-------~~~~~~~~~~~~~i~~~~~~~~~~e 385 (408)
|+-+ .+.|++..+.-...+.+|+.+++.+...+....+ ......+++++.+++..+.++..+|
T Consensus 136 ~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE 206 (460)
T PRK11462 136 VITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKE 206 (460)
T ss_pred HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHhccee
Confidence 8887 5889999999999999988888776655544322 1223345555555555555554445
No 238
>PRK10429 melibiose:sodium symporter; Provisional
Probab=97.22 E-value=0.011 Score=58.05 Aligned_cols=105 Identities=11% Similarity=0.017 Sum_probs=57.0
Q ss_pred HHHhhhhHHHHHHHHHHh----hhchHHHH-HHHHHHHHHHHHHHHhhh--h-h-HHHHHHHH--HHHHHhhhhhhhhhh
Q 015377 251 ITSFAELPGLLTAALLVD----RVGRKLSM-TIMFIFVCIFLLPLVTLQ--S-N-ILLTALLS--GARMFSMGTFIIANI 319 (408)
Q Consensus 251 ~~~~~~~~g~~~~~~l~d----r~grR~~~-~~~~~~~~~~~~~~~~~~--~-~-~~~~~~~~--~~~~~~~~~~~~~~~ 319 (408)
+.-+...+...+.|.++| |+|||+.+ +.+....++....+.... + . .....+.. ....+..........
T Consensus 50 i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~a 129 (473)
T PRK10429 50 VARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWS 129 (473)
T ss_pred HHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHh
Confidence 334555667778899999 55995554 445555444433332211 1 1 11111111 111111222233456
Q ss_pred hccccc-CCchhhHHHhHHHHhhhHhHhhHHHHHHHH
Q 015377 320 FAPEIY-PTSMRSTGAGVAYAVGRIGGMVCPLVAVGL 355 (408)
Q Consensus 320 ~~~el~-p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l 355 (408)
+.+|+- +.+.|....+.-...+.+|+++.+.+...+
T Consensus 130 l~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~ 166 (473)
T PRK10429 130 LVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPF 166 (473)
T ss_pred hhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 778988 578899999887777777766665544433
No 239
>PRK09848 glucuronide transporter; Provisional
Probab=97.19 E-value=0.0048 Score=60.10 Aligned_cols=86 Identities=19% Similarity=0.156 Sum_probs=64.0
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhh--hHHHHHHHHHHhhccCCcch-hhhHHHhhhcCCC-------cchhHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSP--NYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPS-------NRGKWMVVFST 70 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~R~l~Gi~~g~~~-~~~~~~~E~~p~~-------~Rg~~~~~~~~ 70 (408)
|.|+|+.+.++.++..++.++..+.+ +++.+++.-++.|+|.+... ...+..+|..|.+ ++|...+.+++
T Consensus 290 r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~ 369 (448)
T PRK09848 290 RIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSF 369 (448)
T ss_pred HhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHH
Confidence 46889999999888777766665543 56677777888899887653 4445566776653 46888999999
Q ss_pred HHHHHHHHHHHHHhHh
Q 015377 71 FWTFGSVSEAALAWIV 86 (408)
Q Consensus 71 ~~~~G~~l~~~l~~~~ 86 (408)
...+|..+++.+...+
T Consensus 370 ~~klg~aig~~i~g~~ 385 (448)
T PRK09848 370 TRKCGQAIGGSIPAFI 385 (448)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999988776654
No 240
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=97.09 E-value=0.067 Score=51.17 Aligned_cols=103 Identities=19% Similarity=0.168 Sum_probs=53.8
Q ss_pred hHHHHHHHHHhhhhHHHHHHHHHHhhhch-HHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcc
Q 015377 244 SVYINVFITSFAELPGLLTAALLVDRVGR-KLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAP 322 (408)
Q Consensus 244 ~~~~~~~~~~~~~~~g~~~~~~l~dr~gr-R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (408)
.......+..+..+++..+.|.++||.++ |+.+..+.+++++.+.......+.+..........++.....+....++-
T Consensus 38 qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~ 117 (400)
T PF03825_consen 38 QIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSSFWWLFVIMLLFSFFFSPTMPLSDSIAL 117 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHccHHHHHHHHHH
Confidence 34444555567788899999999999854 55555555555554433333333222222222222222333445555555
Q ss_pred cccCCchhhHHHhHHHHhhhHhHhhH
Q 015377 323 EIYPTSMRSTGAGVAYAVGRIGGMVC 348 (408)
Q Consensus 323 el~p~~~R~~a~gi~~~~~~~~~~~~ 348 (408)
+... .+..-+|-....|.+|=+++
T Consensus 118 ~~~~--~~~~~YG~iRlwGSiGf~~~ 141 (400)
T PF03825_consen 118 SYLG--DRGKDYGRIRLWGSIGFIVA 141 (400)
T ss_pred HHcc--cccCCCCcchhhhhHHHHHH
Confidence 5444 24555566666665554444
No 241
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=97.05 E-value=0.00088 Score=61.30 Aligned_cols=110 Identities=13% Similarity=0.107 Sum_probs=75.1
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhh--hhH--HHHHHHHHHhhccCCcchhhhHHHhhhcCCCcchhHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFS--PNY--ISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGS 76 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~--~~~--~~l~~~R~l~Gi~~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~ 76 (408)
+.|||+.+.++.++++++.++.-.. +|. ..+..+|++.-.+.+. .+.|.-|++|.+.|+...+.-....-+|.
T Consensus 407 rlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqv---aYvYtPEVyPTavRatgvGtcSsmaRIgg 483 (528)
T KOG0253|consen 407 RLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQV---AYVYTPEVYPTAVRATGVGTCSSMARIGG 483 (528)
T ss_pred HhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheE---EEEecCcccchhhhhcchhhhhhHHhhhh
Confidence 4699999999999999888765444 332 3467788877666554 34556699999999999999999999999
Q ss_pred HHHHHHHhHhccccchHHHHHHhhHHHHHHHHHHHhccC
Q 015377 77 VSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPE 115 (408)
Q Consensus 77 ~l~~~l~~~~~~~~~Wr~~f~i~~i~~~~~~~~~~~lpE 115 (408)
++.|+++ ...+....-.++.. +...++..+..+++|-
T Consensus 484 I~~p~iA-~~~e~s~sl~i~vy-~~~~ilagIavcffPi 520 (528)
T KOG0253|consen 484 IFSPVIA-MRAELSTSLPIFVY-GALFILAGIAVCFFPI 520 (528)
T ss_pred hhhhHHH-HHhccceeehHHHH-HHHHHHHHHHheeeee
Confidence 9999998 32222223233333 3333333444555553
No 242
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=96.86 E-value=0.034 Score=53.50 Aligned_cols=140 Identities=16% Similarity=0.088 Sum_probs=78.6
Q ss_pred hhhHHHHHHHHHHhh----hchHHHHH-HHHHHHHHHHHHHHhhhh----h-H-HHHHHHHHHHHHhhhhhhhhhhhccc
Q 015377 255 AELPGLLTAALLVDR----VGRKLSMT-IMFIFVCIFLLPLVTLQS----N-I-LLTALLSGARMFSMGTFIIANIFAPE 323 (408)
Q Consensus 255 ~~~~g~~~~~~l~dr----~grR~~~~-~~~~~~~~~~~~~~~~~~----~-~-~~~~~~~~~~~~~~~~~~~~~~~~~e 323 (408)
.-.+.-.+.|.++|| +|||+..+ .+.+...+.........+ . . ......++...+....+....++.+|
T Consensus 60 iDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~ 139 (467)
T COG2211 60 IDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPE 139 (467)
T ss_pred HHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchh
Confidence 334556677888896 57766654 444555544443332221 1 1 11111112222222333344667788
Q ss_pred ccCC-chhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcch----hhHHHHHHHHHHHHHHHHHhcccccCCcccccc
Q 015377 324 IYPT-SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQ----TAAILLLEALIVLSVVVILLIPFETKGKELVNT 394 (408)
Q Consensus 324 l~p~-~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~----~~~~~~~~~~~~i~~~~~~~~~~et~~~~~~~~ 394 (408)
+-+. +.|.+-.+.-..++.+|+++..++.+++....+. .......+..++++.+..++....+|+|..+..
T Consensus 140 iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~ 215 (467)
T COG2211 140 ITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQ 215 (467)
T ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccc
Confidence 8765 7799999999999999988888877777654332 123334444455555555555556666766443
No 243
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.83 E-value=0.31 Score=47.42 Aligned_cols=41 Identities=7% Similarity=-0.164 Sum_probs=37.5
Q ss_pred hhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHh
Q 015377 316 IANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLV 356 (408)
Q Consensus 316 ~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~ 356 (408)
+.|.+.+|+++.+.-.+-+++....+++|.++++.+..++.
T Consensus 149 lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 149 LFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999998876654
No 244
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.55 E-value=0.053 Score=51.32 Aligned_cols=105 Identities=15% Similarity=0.127 Sum_probs=60.8
Q ss_pred HHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH-HHhh----hhhHHHHHHHHHHHHHhhhhh----hhhhhhc
Q 015377 251 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLP-LVTL----QSNILLTALLSGARMFSMGTF----IIANIFA 321 (408)
Q Consensus 251 ~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 321 (408)
+..+..++-.+.+.|+.||.|-|...+++....++-... +.-. .+.... .....+........ .++.-+.
T Consensus 87 Iym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~-~l~~~Gq~iaa~Aq~Fim~lPskiA 165 (480)
T KOG2563|consen 87 IYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRR-PLTHTGQSIAAAAQPFILGLPSKIA 165 (480)
T ss_pred HHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchh-hhhHHhHHHHHHhhhHhhccccHHH
Confidence 334566777788999999999999988876665543221 1111 111111 11111211111111 2223344
Q ss_pred ccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHh
Q 015377 322 PEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLV 356 (408)
Q Consensus 322 ~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~ 356 (408)
.--||...|++|..++.+.+-+|..++-++-+.+.
T Consensus 166 ~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV 200 (480)
T KOG2563|consen 166 AVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILV 200 (480)
T ss_pred HhhCCcchhhhhhhHHHhcchHHHHHHhhccceec
Confidence 56689999999999999988887776655544343
No 245
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=96.52 E-value=0.68 Score=42.88 Aligned_cols=133 Identities=18% Similarity=0.073 Sum_probs=67.6
Q ss_pred hhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhh--hhh---cccccCCchh
Q 015377 256 ELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIA--NIF---APEIYPTSMR 330 (408)
Q Consensus 256 ~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~el~p~~~R 330 (408)
..+-..+.|.++||+|||+.-+..+++-.+.++.-...+...+...-+ ++.......++.. |.+ -..=+|.+-.
T Consensus 82 s~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~~~~~~~L~~GRv-lgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L 160 (354)
T PF05631_consen 82 SAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKHSSNYPVLLLGRV-LGGIATSLLFSAFESWMVHEHNKRGFPQEWL 160 (354)
T ss_pred HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhccccHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHcCCChHHH
Confidence 344556778899999999977665555444443221111111111111 1111111111211 222 1234566655
Q ss_pred hHHHhHHHHh-hhHhHhhHHHHHHHHhhhc--chhhHHHHHHHHHHHHHHHHHhcccccCCc
Q 015377 331 STGAGVAYAV-GRIGGMVCPLVAVGLVTSC--HQTAAILLLEALIVLSVVVILLIPFETKGK 389 (408)
Q Consensus 331 ~~a~gi~~~~-~~~~~~~~p~~~~~l~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~et~~~ 389 (408)
+.-++.+... +.+.++.+.++...+.+.. ++..||..-..+..++.+++...-+|..|.
T Consensus 161 ~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~ 222 (354)
T PF05631_consen 161 SDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGD 222 (354)
T ss_pred HHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCC
Confidence 6556655533 3344555555555444433 345678777777777777777666676554
No 246
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=96.45 E-value=0.094 Score=50.72 Aligned_cols=140 Identities=18% Similarity=0.248 Sum_probs=78.6
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhhhch-HHHHHHHHHHHHHHHH---HHHhhhhhHHHHHHHHHHHHH-h--hhhhhhhhh
Q 015377 247 INVFITSFAELPGLLTAALLVDRVGR-KLSMTIMFIFVCIFLL---PLVTLQSNILLTALLSGARMF-S--MGTFIIANI 319 (408)
Q Consensus 247 ~~~~~~~~~~~~g~~~~~~l~dr~gr-R~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~ 319 (408)
+.....+++..+++++.++...|.+. |+.++.+.+++.+..+ .+.+..+.... +++++.++ . .+..+..-.
T Consensus 75 ~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y--~mL~~R~l~Gvg~~n~a~lR~ 152 (488)
T KOG2325|consen 75 LVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKY--LMLVARILTGVGVGNFAVLRA 152 (488)
T ss_pred HHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHH--HHHHHHHHcCcCcccHHHHHH
Confidence 34445668888899999999999884 4445454444443222 22222221211 22222222 1 233355667
Q ss_pred hcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHH---Hhhh---------cc-hhhHHHHHHHHHHHHHHHHHhccccc
Q 015377 320 FAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVG---LVTS---------CH-QTAAILLLEALIVLSVVVILLIPFET 386 (408)
Q Consensus 320 ~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~---l~~~---------~~-~~~~~~~~~~~~~i~~~~~~~~~~et 386 (408)
|.+.---.+.|.+|.+...+..-+|.+++|.+... +.+. .+ ...+-.++..+.++..+...++.+|.
T Consensus 153 Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~ 232 (488)
T KOG2325|consen 153 YIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEV 232 (488)
T ss_pred HHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeec
Confidence 87886666777777777776444555555544332 2211 11 23566677788888888888877775
Q ss_pred CC
Q 015377 387 KG 388 (408)
Q Consensus 387 ~~ 388 (408)
..
T Consensus 233 ~~ 234 (488)
T KOG2325|consen 233 YR 234 (488)
T ss_pred cc
Confidence 43
No 247
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.43 E-value=0.95 Score=43.58 Aligned_cols=101 Identities=18% Similarity=0.152 Sum_probs=62.1
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHH----Hhhhhh--HHHHHHHHHHHHHh-hhhh---hhh
Q 015377 248 NVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPL----VTLQSN--ILLTALLSGARMFS-MGTF---IIA 317 (408)
Q Consensus 248 ~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~----~~~~~~--~~~~~~~~~~~~~~-~~~~---~~~ 317 (408)
.-.++++.++.|+++..++.+|+|..+.=+.+......++... ....++ ......++.+.... .|.+ -..
T Consensus 298 ~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~ 377 (432)
T PF06963_consen 298 FRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAV 377 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHH
Confidence 3456678889999999999999998776655544433322211 112221 22222222222211 1222 234
Q ss_pred hhhcccccCCchhhHHHhHHHHhhhHhHhhH
Q 015377 318 NIFAPEIYPTSMRSTGAGVAYAVGRIGGMVC 348 (408)
Q Consensus 318 ~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~ 348 (408)
..+..|..|.+.|++-.|+-++...+...+.
T Consensus 378 ~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~ 408 (432)
T PF06963_consen 378 TQIMQENVPESERGAVSGVQNSLQSLFELLS 408 (432)
T ss_pred HHhhcccCCHHHhhHHHHHHHHHHHHHHHHH
Confidence 5577899999999999999999988866554
No 248
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.42 E-value=0.033 Score=53.93 Aligned_cols=130 Identities=25% Similarity=0.247 Sum_probs=78.9
Q ss_pred HHHHHHHHhhh-----chHHHHHHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHHhhhhhhhhhhhccccc---CC
Q 015377 260 LLTAALLVDRV-----GRKLSMTIMFIFVCIFLLPLVTLQ----SNILLTALLSGARMFSMGTFIIANIFAPEIY---PT 327 (408)
Q Consensus 260 ~~~~~~l~dr~-----grR~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~---p~ 327 (408)
-.+.|.++|-+ .||+-++++.+++.+....+.... +......++++..+.....-...-...+|.. |.
T Consensus 41 Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~ 120 (433)
T PF03092_consen 41 KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLASFGYAFADVAADALVVELARREPE 120 (433)
T ss_pred hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCc
Confidence 35678999975 456666666666644433333211 1122222233332222222344555666766 34
Q ss_pred chhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCCcc
Q 015377 328 SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGKE 390 (408)
Q Consensus 328 ~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~et~~~~ 390 (408)
+ |+.-.+.++.+..+|++++..+.+.+.+..+....+.+.+.+..+..+..+++.+|.+.++
T Consensus 121 ~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~e~~~~~ 182 (433)
T PF03092_consen 121 S-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLLEERKVRP 182 (433)
T ss_pred h-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhhhccccc
Confidence 4 6777788888888899998888887777666656677777777777778888887744443
No 249
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=96.38 E-value=0.0086 Score=57.69 Aligned_cols=110 Identities=15% Similarity=0.107 Sum_probs=87.3
Q ss_pred CcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcch-hhhHHHhhhcCCCcchhHHHHHH-HHHHHHHHHH
Q 015377 2 EEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFS-TFWTFGSVSE 79 (408)
Q Consensus 2 ~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~-~~~~~G~~l~ 79 (408)
.||-+++.+++....+=-+.....+|.|+-+-.-+++|+..+... ...+|++..+||+.|..+.++.+ .+..+|--+|
T Consensus 433 iGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~G 512 (618)
T KOG3762|consen 433 IGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLG 512 (618)
T ss_pred hcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchh
Confidence 466677777666666555667788999999999999999999875 55679999999999999998764 4557888888
Q ss_pred HHHHhHhccccchHHHHHHhhHHHHHHHHHHH
Q 015377 80 AALAWIVMPILTWRWLLALSAIPAFVLLIFIV 111 (408)
Q Consensus 80 ~~l~~~~~~~~~Wr~~f~i~~i~~~~~~~~~~ 111 (408)
+++++.+....+=|..|.+.++..++.+..+.
T Consensus 513 slIGG~~v~~fg~~ttf~~~giAcl~~l~~~~ 544 (618)
T KOG3762|consen 513 SLIGGFVVERFGARTTFRIFGIACLVTLALFI 544 (618)
T ss_pred hhhhhhhheeehhHHHHHHHHHHHHHHHHHHH
Confidence 88988888888888888888877666554443
No 250
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.29 E-value=0.019 Score=54.39 Aligned_cols=105 Identities=20% Similarity=0.218 Sum_probs=77.4
Q ss_pred hHHHHHHHHHHHHHHHHhhh---hhH------HHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCc---chhHHHHHHHHH
Q 015377 6 MSILGGALVTFVAGLLSAFS---PNY------ISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSN---RGKWMVVFSTFW 72 (408)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~---~~~------~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~---Rg~~~~~~~~~~ 72 (408)
|+++++.+++.++.++..++ .+. ..++++-++.++|.|.. +...+..+|-+++++ |.....++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 57788888888888773322 222 57899999999999986 556667888887763 445567788899
Q ss_pred HHHHHHHHHHHhHhccccchHHHHHHhhHHHHHHHHHH
Q 015377 73 TFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFI 110 (408)
Q Consensus 73 ~~G~~l~~~l~~~~~~~~~Wr~~f~i~~i~~~~~~~~~ 110 (408)
++|..++..+...+.++.+|.+.|.+.++..++.+..+
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f 119 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVF 119 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHH
Confidence 99999988877777788999999999887665554433
No 251
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=96.25 E-value=0.084 Score=46.70 Aligned_cols=114 Identities=18% Similarity=0.142 Sum_probs=77.1
Q ss_pred CcchhHHHHHHHHHHHHHHHHhhh-------hhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHH
Q 015377 2 EEGRMSILGGALVTFVAGLLSAFS-------PNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWT 73 (408)
Q Consensus 2 ~gRr~~~~~~~~~~~~~~~~~~~~-------~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~ 73 (408)
.|.+.++.++.+...++-.+...+ ++++.+.+.-++.|.+.+.. .+......+.+| ++||.+.++.-.+..
T Consensus 63 ~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~G 141 (250)
T PF06813_consen 63 FGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFG 141 (250)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHH
Confidence 577788888888877766544332 46777888888877775543 333333447777 589999999999999
Q ss_pred HHHHHHHHHHhHhccccchHHHHHHhhHHHHHHHHHHHhccCc
Q 015377 74 FGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPES 116 (408)
Q Consensus 74 ~G~~l~~~l~~~~~~~~~Wr~~f~i~~i~~~~~~~~~~~lpES 116 (408)
+++.+-..+...+-+.+.-+.+......|.++.++..+++.+-
T Consensus 142 LSaai~t~i~~~~f~~~~~~fll~la~~~~~v~l~~~~~vr~~ 184 (250)
T PF06813_consen 142 LSAAIFTQIYSAFFGDDPSSFLLFLAVLPAVVCLVAMFFVRPV 184 (250)
T ss_pred hHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhheecc
Confidence 8888766665555555667777777777777665555554433
No 252
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=96.25 E-value=0.26 Score=50.27 Aligned_cols=122 Identities=16% Similarity=0.139 Sum_probs=69.4
Q ss_pred HHHHHHHHHhh-hchHHHHHHHHHHHHHHHHHHHhhh------hhHHHHHH--HHHHHHHhhhhhhhhhhhcccccCCc-
Q 015377 259 GLLTAALLVDR-VGRKLSMTIMFIFVCIFLLPLVTLQ------SNILLTAL--LSGARMFSMGTFIIANIFAPEIYPTS- 328 (408)
Q Consensus 259 g~~~~~~l~dr-~grR~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~el~p~~- 328 (408)
..+++++++|+ +||++.+..+.++..+....+.... .......+ +.+......+.-+.......|.|+.+
T Consensus 39 ~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~ 118 (654)
T TIGR00926 39 TPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQ 118 (654)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccc
Confidence 45678899997 5999888776555433222222110 00111111 11111111112244555666777643
Q ss_pred --hhhHHHhHHHHhhhHhHhhHHHHHHHHhhhc-------chhhHHHHHHHHHHHHHHHHH
Q 015377 329 --MRSTGAGVAYAVGRIGGMVCPLVAVGLVTSC-------HQTAAILLLEALIVLSVVVIL 380 (408)
Q Consensus 329 --~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~-------~~~~~~~~~~~~~~i~~~~~~ 380 (408)
.|-..+.+.++.+++|+++++.+.+++.+.. +....|.+.+++++++.++..
T Consensus 119 ~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~ 179 (654)
T TIGR00926 119 LSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFM 179 (654)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHH
Confidence 4788999999999999999998888765332 234456666666666655544
No 253
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=95.86 E-value=0.048 Score=44.40 Aligned_cols=84 Identities=14% Similarity=0.136 Sum_probs=67.1
Q ss_pred CcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcchhh-hHHHhhhcCCCcchhHHHHHHHHHHHHHHHHH
Q 015377 2 EEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVF-FSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEA 80 (408)
Q Consensus 2 ~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~~~~-~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~ 80 (408)
.|.|+.++++.+.+.+.... -+-++.+.++.+-.+.|+|.+...+. ..|+.|...+++|++..+++-.....+.+.|.
T Consensus 64 lg~K~sm~lg~~~y~~y~~~-~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~ 142 (156)
T PF05978_consen 64 LGPKWSMILGSLGYAIYIAS-FFYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGN 142 (156)
T ss_pred HhhHHHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHH
Confidence 58899999999988865543 35677889999999999999986543 56888999999999999887777777778777
Q ss_pred HHHhHh
Q 015377 81 ALAWIV 86 (408)
Q Consensus 81 ~l~~~~ 86 (408)
.+.+.+
T Consensus 143 ~~~~~~ 148 (156)
T PF05978_consen 143 LFLFFI 148 (156)
T ss_pred HHHHHH
Confidence 766654
No 254
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=95.82 E-value=0.036 Score=52.08 Aligned_cols=116 Identities=16% Similarity=0.192 Sum_probs=88.8
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcchh-hhHHHhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHV-FFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSE 79 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~~~-~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 79 (408)
|.|-|+++..+++++++..+..-+...-..+.++=.+.|...|+... +-+|+++..|+++-++..++++..--.++.++
T Consensus 314 rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~g 393 (438)
T COG2270 314 RFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLG 393 (438)
T ss_pred HhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHH
Confidence 46889999999999998888777776666777888899999998754 45699999999999999999999999999999
Q ss_pred HHHHhHhcc-ccchHHHHHHhhHHHHHHHHHHHhccCc
Q 015377 80 AALAWIVMP-ILTWRWLLALSAIPAFVLLIFIVFMPES 116 (408)
Q Consensus 80 ~~l~~~~~~-~~~Wr~~f~i~~i~~~~~~~~~~~lpES 116 (408)
|.+...+.+ ..+=|.-+....+..++.++...++|+.
T Consensus 394 p~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 394 PFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecCC
Confidence 988766543 3346665555444444445555566553
No 255
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=95.48 E-value=0.18 Score=51.43 Aligned_cols=109 Identities=17% Similarity=0.106 Sum_probs=71.7
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhh--------HHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCc---chhHHHHH
Q 015377 1 MEEGRMSILGGALVTFVAGLLSAFSPN--------YISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSN---RGKWMVVF 68 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~~~~~~~~~~~--------~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~---Rg~~~~~~ 68 (408)
+.||++.+.++.++..++-.+.+++.. ...++++=.+..+|.|+. +...+...|-.++++ |-....++
T Consensus 50 ~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~f 129 (654)
T TIGR00926 50 WLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFF 129 (654)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHH
Confidence 369999999999998888776665421 123455555566677664 344455666666543 44556677
Q ss_pred HHHHHHHHHHHHHHHhHhcc-------ccchHHHHHHhhHHHHHHHHH
Q 015377 69 STFWTFGSVSEAALAWIVMP-------ILTWRWLLALSAIPAFVLLIF 109 (408)
Q Consensus 69 ~~~~~~G~~l~~~l~~~~~~-------~~~Wr~~f~i~~i~~~~~~~~ 109 (408)
..+.++|++++..+...+.. ..+|...|.+.++..++.++.
T Consensus 130 Y~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lv 177 (654)
T TIGR00926 130 YFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIV 177 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHH
Confidence 77778888887776655542 246999999988766554433
No 256
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=95.45 E-value=0.6 Score=38.03 Aligned_cols=101 Identities=15% Similarity=0.069 Sum_probs=61.8
Q ss_pred HHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCchh
Q 015377 251 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 330 (408)
Q Consensus 251 ~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R 330 (408)
+......+++++.+.+.+++|.|..++++.+.-.+......+.+......... +..+.....+..-..+..|..+.+.|
T Consensus 45 i~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~~~~~~l~~~s~-l~G~~~a~lW~aqg~ylt~~s~~~~~ 123 (156)
T PF05978_consen 45 ILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFYPNSYTLYPASA-LLGFGAALLWTAQGTYLTSYSTEETI 123 (156)
T ss_pred HHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH-HHhhhhHHhhHhhhHHHHHcCCHHHH
Confidence 33444566778899999999999999888776665544433332211111111 11222222334444566777778888
Q ss_pred hHHHhHHHHhhhHhHhhHHHHH
Q 015377 331 STGAGVAYAVGRIGGMVCPLVA 352 (408)
Q Consensus 331 ~~a~gi~~~~~~~~~~~~p~~~ 352 (408)
++-.|+...+...+.+++.++.
T Consensus 124 ~~~~~ifw~i~~~s~i~G~~~~ 145 (156)
T PF05978_consen 124 GRNTGIFWAIFQSSLIFGNLFL 145 (156)
T ss_pred hhHHHHHHHHHHHHHHHHHHHH
Confidence 8888888887777666666544
No 257
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=95.22 E-value=0.66 Score=44.27 Aligned_cols=91 Identities=18% Similarity=0.121 Sum_probs=57.2
Q ss_pred CCcchhHHHHHHHHHHH-HHHHHhhhhhHHHHH------------HHHHHhhccC---Ccch---hhhHHHhhhcCCCcc
Q 015377 1 MEEGRMSILGGALVTFV-AGLLSAFSPNYISLL------------ILRGLAGAGL---GSGH---VFFSWFMEFVPPSNR 61 (408)
Q Consensus 1 ~~gRr~~~~~~~~~~~~-~~~~~~~~~~~~~l~------------~~R~l~Gi~~---g~~~---~~~~~~~E~~p~~~R 61 (408)
|+||||-++....+... +-++.+++.++..++ +.-++.|+.. +.+. ..=+++++.+-.++|
T Consensus 97 r~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~ 176 (498)
T KOG0637|consen 97 RYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAK 176 (498)
T ss_pred ccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhh
Confidence 68999998887777764 446778877765432 2333444321 1211 122467777777666
Q ss_pred hh-HHHHHHHHHHHHHHHHHHHHhHhccccchHHH
Q 015377 62 GK-WMVVFSTFWTFGSVSEAALAWIVMPILTWRWL 95 (408)
Q Consensus 62 g~-~~~~~~~~~~~G~~l~~~l~~~~~~~~~Wr~~ 95 (408)
.+ +.+.+..+..+|..++..++. ..+|+-.
T Consensus 177 ~~~Ans~f~~f~avGnvLGY~~g~----y~~~~~~ 207 (498)
T KOG0637|consen 177 KTRANSVFSFFMAVGNVLGYALGS----YLGLYKI 207 (498)
T ss_pred hhccchhHHHHHHhcceeeeeccc----ccCceEE
Confidence 66 889999999999887765543 4455543
No 258
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=95.15 E-value=0.16 Score=46.86 Aligned_cols=75 Identities=20% Similarity=0.293 Sum_probs=52.8
Q ss_pred hhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhc----------------chhhHHHHHHHHHHHHHH
Q 015377 314 FIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSC----------------HQTAAILLLEALIVLSVV 377 (408)
Q Consensus 314 ~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~----------------~~~~~~~~~~~~~~i~~~ 377 (408)
.+....+.+++.|.+.+++..++..++..+|.+++|++...+.... ....+|++++...++..+
T Consensus 28 q~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~yl~ia~~~~~~~i 107 (310)
T TIGR01272 28 QVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEAAKVHTPYLLLAGALAVLAI 107 (310)
T ss_pred HhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566778889999999999999999999999999999998766321 234566656555444433
Q ss_pred HH-HhcccccCC
Q 015377 378 VI-LLIPFETKG 388 (408)
Q Consensus 378 ~~-~~~~~et~~ 388 (408)
.. ..-.||.+.
T Consensus 108 ~~~~~~~p~~~~ 119 (310)
T TIGR01272 108 IFAFLPLPELQE 119 (310)
T ss_pred HHHHccCCCCCc
Confidence 33 334456544
No 259
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=94.98 E-value=0.56 Score=44.21 Aligned_cols=79 Identities=14% Similarity=0.151 Sum_probs=51.5
Q ss_pred hhhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHH--HHHHHHHhcccccCCccc
Q 015377 314 FIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIV--LSVVVILLIPFETKGKEL 391 (408)
Q Consensus 314 ~~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~--i~~~~~~~~~~et~~~~~ 391 (408)
.+...+..+|..|.+.|+++.++.+..--+|-+++..+.+.+.+......-.-++..+.+ +...+...+..|.|..+.
T Consensus 107 ~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~i~~~l~~ia~wg~E~r~~~~ 186 (403)
T PF03209_consen 107 GTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVALIALLLNLIALWGQEPRRSRR 186 (403)
T ss_pred HHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccc
Confidence 355677889999999999999999999888888888888877765433222222222222 222333455557665544
Q ss_pred c
Q 015377 392 V 392 (408)
Q Consensus 392 ~ 392 (408)
.
T Consensus 187 ~ 187 (403)
T PF03209_consen 187 A 187 (403)
T ss_pred c
Confidence 4
No 260
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=94.24 E-value=2.6 Score=37.27 Aligned_cols=56 Identities=14% Similarity=0.291 Sum_probs=37.5
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHhHhc-----cccchHHHHHHhhHHHHHHHHHHHhc
Q 015377 58 PSNRGKWMVVFSTFWTFGSVSEAALAWIVM-----PILTWRWLLALSAIPAFVLLIFIVFM 113 (408)
Q Consensus 58 ~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~~-----~~~~Wr~~f~i~~i~~~~~~~~~~~l 113 (408)
.|+|+..+.+...++++|.++....-..-. -..+||+.+.+.++..++-++.+..+
T Consensus 1 ~k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 1 QKKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred CCccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 367888888888899999987654322211 13469999998887766655544443
No 261
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=93.99 E-value=0.81 Score=40.88 Aligned_cols=104 Identities=25% Similarity=0.256 Sum_probs=58.6
Q ss_pred HhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhh--hHHHHHHHHHHHHHhhhhhhhhhhhcccccCC-ch
Q 015377 253 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQS--NILLTALLSGARMFSMGTFIIANIFAPEIYPT-SM 329 (408)
Q Consensus 253 ~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~-~~ 329 (408)
.+....+.+..|.+.||.|||+.+..+...............+ ............+......+....+.+|.+|. +.
T Consensus 49 ~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 128 (338)
T COG0477 49 FLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATE 128 (338)
T ss_pred HHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhH
Confidence 3444556689999999999997776655431221111112121 11111111111222223446677888899998 67
Q ss_pred hhHHHhHHHH-hhhHhHhhHHHHHHHHh
Q 015377 330 RSTGAGVAYA-VGRIGGMVCPLVAVGLV 356 (408)
Q Consensus 330 R~~a~gi~~~-~~~~~~~~~p~~~~~l~ 356 (408)
|+...+.... ...++..++|.+...+.
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (338)
T COG0477 129 RGLAVGLVTLGAGALGLALGPLLAGLLL 156 (338)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888777 45566777775554443
No 262
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=93.33 E-value=8.9 Score=37.73 Aligned_cols=42 Identities=14% Similarity=-0.056 Sum_probs=37.2
Q ss_pred hhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhh
Q 015377 316 IANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVT 357 (408)
Q Consensus 316 ~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~ 357 (408)
..|.+..|+++.+...+-+++....+++|.++++.+..++.+
T Consensus 164 LFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 164 LFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 579999999999999999999999999999999877766544
No 263
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=92.79 E-value=4.2 Score=36.22 Aligned_cols=81 Identities=25% Similarity=0.318 Sum_probs=47.3
Q ss_pred CcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcch-hhhHH-HhhhcCCCcchhH---H-HHHHHHHHHH
Q 015377 2 EEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSW-FMEFVPPSNRGKW---M-VVFSTFWTFG 75 (408)
Q Consensus 2 ~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~~-~~~~~-~~E~~p~~~Rg~~---~-~~~~~~~~~G 75 (408)
.|||+.-..-++.++++ .++-.+|.|-.++++|.+-|++...-. ..-+| ++|.-. +||.- . ..+.=+..+|
T Consensus 99 qGRKracvtycitYiLs-CiTKhSpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHne--kr~FeqqWls~TFskA~ffg 175 (454)
T KOG4332|consen 99 QGRKRACVTYCITYILS-CITKHSPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHNE--KRGFEQQWLSVTFSKAVFFG 175 (454)
T ss_pred hccccceeeehHHHHHH-HHhhcCCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhh--ccCChHhhhhHHHHHHHHhh
Confidence 58888654444444433 346678899999999999999877643 33455 557653 33322 2 2233333445
Q ss_pred HHHHHHHHhH
Q 015377 76 SVSEAALAWI 85 (408)
Q Consensus 76 ~~l~~~l~~~ 85 (408)
..+.+.+++.
T Consensus 176 NglvAiiaGl 185 (454)
T KOG4332|consen 176 NGLVAIIAGL 185 (454)
T ss_pred ccHHHHHHHH
Confidence 5444444444
No 264
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=92.40 E-value=9.8 Score=36.34 Aligned_cols=125 Identities=14% Similarity=0.120 Sum_probs=62.0
Q ss_pred HHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCchhhHHHhHHHHh
Q 015377 261 LTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAV 340 (408)
Q Consensus 261 ~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R~~a~gi~~~~ 340 (408)
+....+.|.+|-|++++.+.+...+.-..+.+.++-......-+... ...+.-...+.|.=-..|++.--++.+.+.+.
T Consensus 59 ~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg-~~~a~evay~sYiys~v~~~~yq~vts~~raa 137 (412)
T PF01770_consen 59 LPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYG-LATAAEVAYYSYIYSVVDKEHYQKVTSYTRAA 137 (412)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHH-HHHHHHHHHHHHheeecCHHHHHHHHHHHHHH
Confidence 45568899999999998876654443333333332221111111111 11122223334444445676666777777776
Q ss_pred hhHhHhhHHHHHHHHhhhcc-hhhHHHHHH-HHHHHHHHHHHhccccc
Q 015377 341 GRIGGMVCPLVAVGLVTSCH-QTAAILLLE-ALIVLSVVVILLIPFET 386 (408)
Q Consensus 341 ~~~~~~~~p~~~~~l~~~~~-~~~~~~~~~-~~~~i~~~~~~~~~~et 386 (408)
.-+|.+++..+...++...+ .+.....+. +...++.++.+++|+-.
T Consensus 138 ~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~~ 185 (412)
T PF01770_consen 138 TLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMPK 185 (412)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 65665565554433333222 222222223 33456666667776543
No 265
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=91.64 E-value=16 Score=36.73 Aligned_cols=117 Identities=14% Similarity=0.173 Sum_probs=70.3
Q ss_pred CcchhHHHHHHHHHHHHHHHHhhhhh-------------------------HHHHHHHHHHhhccCCcc-hhhhHHHhhh
Q 015377 2 EEGRMSILGGALVTFVAGLLSAFSPN-------------------------YISLLILRGLAGAGLGSG-HVFFSWFMEF 55 (408)
Q Consensus 2 ~gRr~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~ 55 (408)
.||-+++.++.++..++..+..++.. ...++.+.-+..+|.|+- +....+-+|-
T Consensus 101 ~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQ 180 (571)
T KOG1237|consen 101 LGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQ 180 (571)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccc
Confidence 47888899888888877543322211 124555555666676653 3333343454
Q ss_pred cC----CCcch--hHHHHHHHHHHHHHHHHHHHHhHhccccchHHHHHHhhHHHHHHHHHHHhccCcchhH
Q 015377 56 VP----PSNRG--KWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYL 120 (408)
Q Consensus 56 ~p----~~~Rg--~~~~~~~~~~~~G~~l~~~l~~~~~~~~~Wr~~f~i~~i~~~~~~~~~~~lpESp~~l 120 (408)
.+ ++.++ ..+.++.+..+.|..++..+.-.+-++.+|.+-|.+..+..++.++. +++-+|.|-
T Consensus 181 fd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~i--F~~g~~~y~ 249 (571)
T KOG1237|consen 181 FDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILI--FLPGFPFYR 249 (571)
T ss_pred cCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHH--HHcCceeEE
Confidence 44 33344 55678888888888887655444446789999998876655443332 334445444
No 266
>PF12832 MFS_1_like: MFS_1 like family
Probab=90.98 E-value=3.8 Score=28.81 Aligned_cols=37 Identities=14% Similarity=0.130 Sum_probs=27.5
Q ss_pred hHHHHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHH
Q 015377 244 SVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMF 280 (408)
Q Consensus 244 ~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~ 280 (408)
.+.....+.-+..+++..+.|.++||.+|++..+...
T Consensus 36 ~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~ 72 (77)
T PF12832_consen 36 QIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGS 72 (77)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHH
Confidence 3344444555778889999999999999998776543
No 267
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=90.81 E-value=1.2 Score=42.31 Aligned_cols=64 Identities=23% Similarity=0.216 Sum_probs=53.9
Q ss_pred hhhhhHHHHHHHHHHhhccCCcchh-hhHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHhHh
Q 015377 23 AFSPNYISLLILRGLAGAGLGSGHV-FFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIV 86 (408)
Q Consensus 23 ~~~~~~~~l~~~R~l~Gi~~g~~~~-~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~ 86 (408)
-+.++.+..++.-+..|+-.|..++ .+..+.|-.|+++|...++....+-++|.+++.+++..+
T Consensus 330 ~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 330 RFIPSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 4568889999999999998888765 355577888999999999999999999999998887654
No 268
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=90.66 E-value=17 Score=35.24 Aligned_cols=36 Identities=11% Similarity=0.104 Sum_probs=25.3
Q ss_pred hhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHH
Q 015377 315 IIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPL 350 (408)
Q Consensus 315 ~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~ 350 (408)
+....+.++..+++.|-.+..+...+-.+|-.++..
T Consensus 391 s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~ 426 (437)
T TIGR00939 391 SLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAV 426 (437)
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455667788888888888877777666555555443
No 269
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=89.89 E-value=21 Score=35.01 Aligned_cols=37 Identities=3% Similarity=-0.016 Sum_probs=31.5
Q ss_pred HHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHhHh
Q 015377 50 SWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIV 86 (408)
Q Consensus 50 ~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~ 86 (408)
.+..|.+..++=.|..+++..+-++|.++++.+...+
T Consensus 152 ~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~ 188 (472)
T TIGR00769 152 GFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYF 188 (472)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3467999999988999999999999999999776554
No 270
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=87.79 E-value=2.8 Score=37.68 Aligned_cols=109 Identities=10% Similarity=0.010 Sum_probs=65.5
Q ss_pred CcchhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHHH
Q 015377 2 EEGRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEA 80 (408)
Q Consensus 2 ~gRr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~ 80 (408)
.||+.....+.++..+.+- ..+.-++..-++.-.+.|++...- ....+.++-..|.++-|+.-++.+...++|....+
T Consensus 327 ~G~n~~wv~~a~~~tl~~H-~~l~Ft~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~ 405 (459)
T KOG4686|consen 327 YGFNLWWVASACILTLLGH-SGLFFTFLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIP 405 (459)
T ss_pred hcceehhHHHHHHHHHHHh-hhHHhhhccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHh
Confidence 4555554444444433332 122233444456666777765432 12234456777999999999999999999999999
Q ss_pred HHHhHhccccc---hHHHHH-HhhHHHHHHHHHHH
Q 015377 81 ALAWIVMPILT---WRWLLA-LSAIPAFVLLIFIV 111 (408)
Q Consensus 81 ~l~~~~~~~~~---Wr~~f~-i~~i~~~~~~~~~~ 111 (408)
.++..+.+..| |-=.|. +.+..++......+
T Consensus 406 Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~ 440 (459)
T KOG4686|consen 406 IIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILF 440 (459)
T ss_pred hhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHh
Confidence 99998876554 433443 33444544433333
No 271
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=86.58 E-value=28 Score=32.62 Aligned_cols=132 Identities=16% Similarity=0.091 Sum_probs=68.4
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccC
Q 015377 247 INVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYP 326 (408)
Q Consensus 247 ~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p 326 (408)
+.+.+..++--..+.+..++.+|+|.++.+..+.+..++-.. +-...+......-...........+.+.....-|-||
T Consensus 51 lLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~-iR~~~~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fp 129 (395)
T COG2807 51 LLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGIL-IRSLGGLPLLFLGTLLAGAGIAVINVLLPSLIKRDFP 129 (395)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHH-HHhcccHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcc
Confidence 333444444445667788899999988877665444333221 1111111111000011111112223344555668898
Q ss_pred CchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhc-chhhHHHHHHHHHHHHHHHHH
Q 015377 327 TSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSC-HQTAAILLLEALIVLSVVVIL 380 (408)
Q Consensus 327 ~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~-~~~~~~~~~~~~~~i~~~~~~ 380 (408)
.+. +...|+-...-.+++.+++-+..++.+.. ++.....+.+..++++.++.+
T Consensus 130 k~~-~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~Wl 183 (395)
T COG2807 130 KRV-GLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWL 183 (395)
T ss_pred cch-hhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHh
Confidence 875 44455555555556666665555555443 456677777777777655543
No 272
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=83.87 E-value=7.8 Score=36.62 Aligned_cols=67 Identities=15% Similarity=0.109 Sum_probs=49.0
Q ss_pred hhhhhhcccccCCc---hhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHh
Q 015377 315 IIANIFAPEIYPTS---MRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILL 381 (408)
Q Consensus 315 ~~~~~~~~el~p~~---~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 381 (408)
+......+|.|+.+ .|..++..-+..-++|+.+++...+++.+..++...|.+.++..+++.+..+.
T Consensus 52 ~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 52 PNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred ccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHh
Confidence 45566678888765 57888889999999999999888887776666666777766666666554443
No 273
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=80.40 E-value=20 Score=35.13 Aligned_cols=23 Identities=4% Similarity=0.190 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHHHhcccccC
Q 015377 365 ILLLEALIVLSVVVILLIPFETK 387 (408)
Q Consensus 365 ~~~~~~~~~i~~~~~~~~~~et~ 387 (408)
..+.|.+.++..+.+.++.+|..
T Consensus 203 l~fwg~~~l~~T~~v~~~k~E~~ 225 (544)
T PF13000_consen 203 LKFWGWVFLIVTILVAFFKKEKP 225 (544)
T ss_pred HHHHHHHHHHHHHHHheEeeccc
Confidence 34677777777778788877643
No 274
>PRK03612 spermidine synthase; Provisional
Probab=77.86 E-value=79 Score=31.56 Aligned_cols=41 Identities=17% Similarity=0.112 Sum_probs=24.0
Q ss_pred hHHHhHHHHhhhHhHhhHHHHHHHHhh-hcchhhHHHHHHHH
Q 015377 331 STGAGVAYAVGRIGGMVCPLVAVGLVT-SCHQTAAILLLEAL 371 (408)
Q Consensus 331 ~~a~gi~~~~~~~~~~~~p~~~~~l~~-~~~~~~~~~~~~~~ 371 (408)
+...|-.++...+|+++++++.+.++- ..+.....++.+.+
T Consensus 144 g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l 185 (521)
T PRK03612 144 GHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSL 185 (521)
T ss_pred hhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 455677788888888888777665432 34433333343433
No 275
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=77.29 E-value=31 Score=33.64 Aligned_cols=99 Identities=12% Similarity=0.017 Sum_probs=63.6
Q ss_pred HhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCchhhH
Q 015377 253 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRST 332 (408)
Q Consensus 253 ~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R~~ 332 (408)
...-.+.+++++.+.|++|.|..++++...-..+.....+.+.......-...+ +.....+..-..|.+|-.+.+.+.+
T Consensus 60 Y~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~N~y~~yfssallG-~Gaallw~GqG~ylt~~st~~tie~ 138 (461)
T KOG3098|consen 60 YAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFPNSYYLYFSSALLG-FGAALLWTGQGGYLTSNSTRETIER 138 (461)
T ss_pred HHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhcchHHHHHHHHHhh-hhHHheecccceehhhcCChhhHHH
Confidence 444567789999999999999999887666555555444434222211111111 1111122334557889999999999
Q ss_pred HHhHHHHhhhHhHhhHHHHH
Q 015377 333 GAGVAYAVGRIGGMVCPLVA 352 (408)
Q Consensus 333 a~gi~~~~~~~~~~~~p~~~ 352 (408)
-.++..+++..+.+++..+.
T Consensus 139 Nisi~Wai~~~~li~Ggi~l 158 (461)
T KOG3098|consen 139 NISIFWAIGQSSLIIGGIIL 158 (461)
T ss_pred HHHHHHHHHHHHHHhhhHhh
Confidence 99999999888777765444
No 276
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=76.95 E-value=80 Score=31.19 Aligned_cols=37 Identities=11% Similarity=0.072 Sum_probs=30.0
Q ss_pred HhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHhHhcc
Q 015377 52 FMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMP 88 (408)
Q Consensus 52 ~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~~~ 88 (408)
..|.++.+|=.+.-++++.+-++|.++++.+.....+
T Consensus 169 AN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 169 ANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4588888998899999999999999988876655443
No 277
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=72.85 E-value=32 Score=24.70 Aligned_cols=48 Identities=10% Similarity=0.031 Sum_probs=33.4
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHhhh
Q 015377 247 INVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ 294 (408)
Q Consensus 247 ~~~~~~~~~~~~g~~~~~~l~dr~grR~~~~~~~~~~~~~~~~~~~~~ 294 (408)
.....+.++.++|.+...++.++.++|..+..+.+.+.+....+...+
T Consensus 31 ~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~ 78 (85)
T PF06779_consen 31 WLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTH 78 (85)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344455677788888888888887777777777777666665555444
No 278
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=72.42 E-value=15 Score=33.68 Aligned_cols=78 Identities=21% Similarity=0.085 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcchhh-hHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHhHh
Q 015377 9 LGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVF-FSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIV 86 (408)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~~~~-~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~ 86 (408)
-+-++++.+...+-.+.++++..++.-+..|+=.|+.++- +.-+.+-.++++|-..++....+-++|..++++++..+
T Consensus 323 Q~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 323 QFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 3444555566666778899999999999999877776653 44467778899999999999999999999888776543
No 279
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=67.37 E-value=2 Score=39.51 Aligned_cols=35 Identities=17% Similarity=0.214 Sum_probs=2.3
Q ss_pred hhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHH
Q 015377 315 IIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCP 349 (408)
Q Consensus 315 ~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p 349 (408)
+....+.++..+++.|-.+..+...+-.+|-.++.
T Consensus 267 tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs 301 (309)
T PF01733_consen 267 TLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGS 301 (309)
T ss_dssp HHHH-------------------------------
T ss_pred hceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45567778888888887776666655444444433
No 280
>PRK10697 DNA-binding transcriptional activator PspC; Provisional
Probab=66.90 E-value=11 Score=28.96 Aligned_cols=52 Identities=17% Similarity=0.332 Sum_probs=27.8
Q ss_pred ccccchHHHHHHhhH-----HHHH-HHHHHHhccCcchhHhhcCChhhHHHHHHHHHH
Q 015377 87 MPILTWRWLLALSAI-----PAFV-LLIFIVFMPESPRYLCTKGRITDAHNILDKIAQ 138 (408)
Q Consensus 87 ~~~~~Wr~~f~i~~i-----~~~~-~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~ 138 (408)
.+.+--|..+....+ ++++ .++.++.+|+.|......+..+.+.+.++++.+
T Consensus 31 i~~~~VRl~~vl~~~~~~~~~~~~~Yi~l~~~lp~~P~~~~~~~~~~s~~~~l~~~~~ 88 (118)
T PRK10697 31 VPVKLVRIIVVLSIFFGLFVFTLVAYIILSFALDPMPDNMAFGEQQPSSSELLDEVDR 88 (118)
T ss_pred CCHHHHHHHHHHHHHHhhchHHHHHHHHHHHhccCCcccccccccCCCHHHHHHHHHH
Confidence 344445666554332 2222 355677888888643333444555666666543
No 281
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=66.89 E-value=92 Score=27.59 Aligned_cols=27 Identities=11% Similarity=0.118 Sum_probs=16.7
Q ss_pred HHHHHHHHHHhhhchHHHHHHHHHHHH
Q 015377 258 PGLLTAALLVDRVGRKLSMTIMFIFVC 284 (408)
Q Consensus 258 ~g~~~~~~l~dr~grR~~~~~~~~~~~ 284 (408)
++.+.+-.++.|+.-|++.+.+.+.+.
T Consensus 255 lAVigGk~lAskIS~rtVt~~ggi~Fi 281 (294)
T KOG2881|consen 255 LAVIGGKYLASKISVRTVTLIGGILFI 281 (294)
T ss_pred HHHhhhHHHhhhheeEEEEEecchhHH
Confidence 344555677788887876665544443
No 282
>PF06341 DUF1056: Protein of unknown function (DUF1056); InterPro: IPR009406 This entry is represented by Bacteriophage bIL286, Orf42. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several putative head-tail joining bacteriophage proteins.
Probab=66.82 E-value=10 Score=25.27 Aligned_cols=42 Identities=19% Similarity=0.207 Sum_probs=30.1
Q ss_pred HHhhhhhHHHHHHHHHHhhccCCcchhhhHHHhhhcCCCcch
Q 015377 21 LSAFSPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRG 62 (408)
Q Consensus 21 ~~~~~~~~~~l~~~R~l~Gi~~g~~~~~~~~~~E~~p~~~Rg 62 (408)
+.+..-++..+......-|++.|.......+++|+.+++.+|
T Consensus 21 la~i~i~it~F~~n~~~g~i~i~I~l~l~G~isE~i~~~Kgg 62 (63)
T PF06341_consen 21 LAMIFINITAFLINQIAGLISIGITLFLAGLISEFISKQKGG 62 (63)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 333445667777777777778787767777899999986655
No 283
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=62.21 E-value=1.6e+02 Score=28.63 Aligned_cols=52 Identities=15% Similarity=0.132 Sum_probs=32.4
Q ss_pred hhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHh
Q 015377 330 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILL 381 (408)
Q Consensus 330 R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 381 (408)
++...+...-+--+..+++|++.+.+....+......+.++..+++...=++
T Consensus 147 La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~ 198 (432)
T PF06963_consen 147 LARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYF 198 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444578999999998776555555556666666666655544
No 284
>TIGR02978 phageshock_pspC phage shock protein C. All members of this protein family are the phage shock protein PspC. These proteins contain a PspC domain, as do other members of the larger family of proteins described by Pfam model pfam04024. The phage shock regulon is restricted to the Proteobacteria and somewhat sparsely distributed there. It is expressed, under positive control of a sigma-54-dependent transcription factor, PspF, which binds and is modulated by PspA. Stresses that induce the psp regulon include phage secretin overexpression, ethanol, heat shock, and protein export defects.
Probab=57.08 E-value=30 Score=26.78 Aligned_cols=36 Identities=11% Similarity=0.240 Sum_probs=20.8
Q ss_pred hHhccccchHHHHHHhhHH-----HHH-HHHHHHhccCcchh
Q 015377 84 WIVMPILTWRWLLALSAIP-----AFV-LLIFIVFMPESPRY 119 (408)
Q Consensus 84 ~~~~~~~~Wr~~f~i~~i~-----~~~-~~~~~~~lpESp~~ 119 (408)
++=.+.+-.|..|.+..+. .++ .++.++.+|+.|.-
T Consensus 23 y~gi~~~~VRl~~vl~~~~~~~~~~ll~Y~i~w~~lp~~p~~ 64 (121)
T TIGR02978 23 YFGVEVWLVRILVVSALLFGGGFFVLVAYIALWLLLDKKPIN 64 (121)
T ss_pred HHCcCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCccc
Confidence 3333445578877765432 122 35567788888854
No 285
>PF04024 PspC: PspC domain; InterPro: IPR007168 This domain is found in Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.
Probab=51.04 E-value=17 Score=24.24 Aligned_cols=32 Identities=16% Similarity=0.382 Sum_probs=19.8
Q ss_pred ccccchHHHHHHhhHHH----HHHHHHHHhccCcch
Q 015377 87 MPILTWRWLLALSAIPA----FVLLIFIVFMPESPR 118 (408)
Q Consensus 87 ~~~~~Wr~~f~i~~i~~----~~~~~~~~~lpESp~ 118 (408)
.+..-+|..|.+..+.+ ++.++.++.+|+.|+
T Consensus 26 id~~~vRl~~v~l~~~~~~~~l~Y~~~w~~lP~~~~ 61 (61)
T PF04024_consen 26 IDPTLVRLIFVVLTFFTGGGILLYLILWLLLPKEPE 61 (61)
T ss_pred cCHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCCC
Confidence 34456888888765532 223556677888763
No 286
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=47.44 E-value=82 Score=32.69 Aligned_cols=44 Identities=14% Similarity=0.291 Sum_probs=36.3
Q ss_pred hhhhhhcccccCCchhhHHHhHHHHhhhH-hHhhHHHHHHHHhhh
Q 015377 315 IIANIFAPEIYPTSMRSTGAGVAYAVGRI-GGMVCPLVAVGLVTS 358 (408)
Q Consensus 315 ~~~~~~~~el~p~~~R~~a~gi~~~~~~~-~~~~~p~~~~~l~~~ 358 (408)
.....++--..|.+.|+.|.|+..++-++ |.+-+|++++.++|.
T Consensus 605 ~p~~~i~LR~V~~e~ks~AlG~~~~~irllg~IPsPIifG~~ID~ 649 (735)
T KOG3626|consen 605 VPGMLIVLRCVPPEEKSFALGFQWMLIRLLGFIPSPIIFGAVIDT 649 (735)
T ss_pred CcceEEEEEccCchhchhhhHHHHHHHHHHhcCCchHhhhhhHhh
Confidence 34455667889999999999999999885 788889999988754
No 287
>PF01528 Herpes_glycop: Herpesvirus glycoprotein M; InterPro: IPR000785 The Equid herpesvirus 1 (Equine herpesvirus 1, EHV-1) protein belongs to a family of sequences that groups together Human herpesvirus 1 (HHV-1) UL10, EHV-1 52, Human herpesvirus 3 (HHV-3) 50, Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4) BBRF3, Human herpesvirus 1 (HHV-1) 39 and Human cytomegalovirus (HHV-5) UL100. Little is yet known about the properties of the protein. However, its amino acid sequence is highly hydrophobic, containing 8 putative membrane-spanning regions, and it is therefore believed to be either membrane-associated or transmembrane.; GO: 0016020 membrane
Probab=46.51 E-value=1.1e+02 Score=29.00 Aligned_cols=47 Identities=13% Similarity=0.010 Sum_probs=22.6
Q ss_pred HhhhcCCCcchhHHH-HHHHHHHHHHHHHHHHHhHhcc-ccchHHHHHH
Q 015377 52 FMEFVPPSNRGKWMV-VFSTFWTFGSVSEAALAWIVMP-ILTWRWLLAL 98 (408)
Q Consensus 52 ~~E~~p~~~Rg~~~~-~~~~~~~~G~~l~~~l~~~~~~-~~~Wr~~f~i 98 (408)
+.|..-.+.-..-.| -.+...+.+.+.-|.+-|--.- ..+|+...-+
T Consensus 259 ~~E~~L~~Yv~v~~G~~~G~lia~~~l~~p~~~Y~~~f~~~~~~~~i~~ 307 (374)
T PF01528_consen 259 VIEVVLARYVKVQFGPHLGTLIACGILGLPAIRYENRFVAANLHTGIAI 307 (374)
T ss_pred HHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhccccHHHHHHH
Confidence 467765544222222 2234444455555555554332 4567765443
No 288
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=45.68 E-value=2.8e+02 Score=26.59 Aligned_cols=44 Identities=16% Similarity=0.260 Sum_probs=25.2
Q ss_pred Hhhhhh-hhhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHH
Q 015377 309 FSMGTF-IIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAV 353 (408)
Q Consensus 309 ~~~~~~-~~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~ 353 (408)
...|.. +....+.++..|++.+-.+..+....- .+|+....+..
T Consensus 355 lsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl-~~Gl~~G~~~s 399 (406)
T KOG1479|consen 355 LSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFL-VGGLALGSLLS 399 (406)
T ss_pred hccchHhhheehhcCCCCChHHHHHHHHHHHHHH-HHHHHHhhHHH
Confidence 344544 455678889998887776665555443 33333333333
No 289
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=42.85 E-value=47 Score=31.55 Aligned_cols=31 Identities=35% Similarity=0.495 Sum_probs=19.4
Q ss_pred HHHHHHHh-----hhchHHHHHH-HHHHHHHHHHHHH
Q 015377 261 LTAALLVD-----RVGRKLSMTI-MFIFVCIFLLPLV 291 (408)
Q Consensus 261 ~~~~~l~d-----r~grR~~~~~-~~~~~~~~~~~~~ 291 (408)
++...+.| |+|||+..++ +..+.+.++..+.
T Consensus 81 llWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs 117 (510)
T KOG3574|consen 81 LLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLS 117 (510)
T ss_pred HHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHh
Confidence 34556666 9999998765 4444455554443
No 290
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=42.03 E-value=1e+02 Score=23.21 Aligned_cols=51 Identities=14% Similarity=0.055 Sum_probs=32.0
Q ss_pred CchhhHHHhHHHHhhhHhHhhHHHHHHHHhhhcchh--hHHHHHHHHHHHHHH
Q 015377 327 TSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQT--AAILLLEALIVLSVV 377 (408)
Q Consensus 327 ~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~~~~~~--~~~~~~~~~~~i~~~ 377 (408)
.+.++.+.++-...-.+++++.....+++++..-.. +..+++-.+.+.+.+
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~llD~~agTsPwglIv~lllGf~AG~ 89 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAGV 89 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence 455777777777777788888888888888764333 333344344344333
No 291
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=40.42 E-value=1.7e+02 Score=23.77 Aligned_cols=80 Identities=13% Similarity=0.122 Sum_probs=41.0
Q ss_pred HHHhhhchHHHHHHHHHHHH-HHHHHH-Hhh--h---hhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCchhhHHHhHH
Q 015377 265 LLVDRVGRKLSMTIMFIFVC-IFLLPL-VTL--Q---SNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVA 337 (408)
Q Consensus 265 ~l~dr~grR~~~~~~~~~~~-~~~~~~-~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~p~~~R~~a~gi~ 337 (408)
.++||+-||..+..+.=... +..+.. ++. . +....+.++....+|..+...+.|.+.+-.-..+.-++-.|+-
T Consensus 56 ~Vs~RM~rRm~~~~GiP~~lG~~~f~~~y~l~~~~~~dvP~~~~~~~S~~~Fg~gllGisYGilSaSWD~~r~GSllG~~ 135 (153)
T PF11947_consen 56 VVSNRMLRRMAVFVGIPTALGVAVFVVFYYLKSRQIVDVPPWAVLLVSLVFFGLGLLGISYGILSASWDPEREGSLLGWE 135 (153)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHhccccccCchHHHHHHHHHHHHHHHhhhhhhcccccCCCCCCCcccHH
Confidence 56699999988765422211 111111 111 1 1111122222333444566667777777666666677777777
Q ss_pred HHhhhHh
Q 015377 338 YAVGRIG 344 (408)
Q Consensus 338 ~~~~~~~ 344 (408)
.+--+++
T Consensus 136 e~~~N~~ 142 (153)
T PF11947_consen 136 EFKRNWG 142 (153)
T ss_pred HHHHhHH
Confidence 6655553
No 292
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=40.30 E-value=3.1e+02 Score=25.51 Aligned_cols=96 Identities=18% Similarity=0.139 Sum_probs=47.1
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHhhccCCcchhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHhHhcc---c
Q 015377 13 LVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMP---I 89 (408)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~l~~~R~l~Gi~~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~~~---~ 89 (408)
++.+.+-.+.+++.+.++=+.+-.+..++-|.+-+.+.-++-..|+.--..+ ..+.....++|+ ..|..++ .
T Consensus 100 ~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss~Y~~~~i~~W----SSGTGgAGliGa-~SYa~lT~~~~ 174 (409)
T KOG3880|consen 100 LLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSSRYPSIVIAGW----SSGTGGAGLIGA-SSYAFLTSWAN 174 (409)
T ss_pred HHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhccCCCceeccc----cCCCCcchhhhh-hHHHHHhhhcC
Confidence 3344555677888988888888777777776543322212222333322222 222222222222 2333322 2
Q ss_pred cchHHHHHHhhHHHHHHHHHHHhc
Q 015377 90 LTWRWLLALSAIPAFVLLIFIVFM 113 (408)
Q Consensus 90 ~~Wr~~f~i~~i~~~~~~~~~~~l 113 (408)
.+=|....+....+++....++++
T Consensus 175 ~spk~Tlli~l~lP~lfa~~yf~l 198 (409)
T KOG3880|consen 175 LSPKSTLLIMLFLPALFAFAYFFL 198 (409)
T ss_pred CChhhHHHHHHHHHHHHHHHHHhe
Confidence 356666666655444444444444
No 293
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=35.54 E-value=61 Score=24.32 Aligned_cols=30 Identities=13% Similarity=0.367 Sum_probs=21.4
Q ss_pred ccchHHHHHHhhHHHHHH-HHHHHhccCcch
Q 015377 89 ILTWRWLLALSAIPAFVL-LIFIVFMPESPR 118 (408)
Q Consensus 89 ~~~Wr~~f~i~~i~~~~~-~~~~~~lpESp~ 118 (408)
..+|+.+|++....++++ .+...+.||+..
T Consensus 56 ~e~we~~~f~~~~~~~v~~~~~~~y~PD~~i 86 (105)
T PF10183_consen 56 WEGWELPFFFGFSGSLVFGGVFLAYKPDTSI 86 (105)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHcCCCCCH
Confidence 458999999887666554 455667788753
No 294
>COG4708 Predicted membrane protein [Function unknown]
Probab=32.14 E-value=67 Score=25.47 Aligned_cols=32 Identities=28% Similarity=0.621 Sum_probs=25.6
Q ss_pred hhHHHHHHHHHhhhhHHHHHHHHHHhhhchHH
Q 015377 243 ASVYINVFITSFAELPGLLTAALLVDRVGRKL 274 (408)
Q Consensus 243 ~~~~~~~~~~~~~~~~g~~~~~~l~dr~grR~ 274 (408)
.+..++-+..++++.+...+++.+.|++|+|.
T Consensus 134 ~PFlltw~tta~gEfvsl~vg~~~m~kl~kr~ 165 (169)
T COG4708 134 APFLLTWFTTALGEFVSLYVGALIMDKLGKRI 165 (169)
T ss_pred CcHHHHHHHHHHHHHHHHHhhHHHHHHHHhhh
Confidence 34445556667889999999999999999985
No 295
>PF13428 TPR_14: Tetratricopeptide repeat
Probab=31.15 E-value=77 Score=18.97 Aligned_cols=23 Identities=13% Similarity=0.228 Sum_probs=18.4
Q ss_pred hHhhcCChhhHHHHHHHHHHHcC
Q 015377 119 YLCTKGRITDAHNILDKIAQFNQ 141 (408)
Q Consensus 119 ~l~~~~~~~~a~~~l~~~~~~~~ 141 (408)
.+...|+.++|++.+++.-+.++
T Consensus 10 ~~~~~G~~~~A~~~~~~~l~~~P 32 (44)
T PF13428_consen 10 AYRRLGQPDEAERLLRRALALDP 32 (44)
T ss_pred HHHHcCCHHHHHHHHHHHHHHCc
Confidence 45678999999999999876543
No 296
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=30.89 E-value=1.6e+02 Score=19.31 Aligned_cols=47 Identities=11% Similarity=0.135 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHhHhccccchHHHHHHhhHHHHHHHHHHHhccCcc
Q 015377 71 FWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESP 117 (408)
Q Consensus 71 ~~~~G~~l~~~l~~~~~~~~~Wr~~f~i~~i~~~~~~~~~~~lpESp 117 (408)
+.-+|.+++...+......++.+....+..+.+++.......+|++|
T Consensus 10 s~il~~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i~~~~~~~~i~~~~ 56 (57)
T PF11151_consen 10 SFILGEVVGYIGSSLTGVTYNFTTAAIIAVIFGIIVANIIAVIPKKS 56 (57)
T ss_pred HHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 34456666555555444466777777777777766655555565543
No 297
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=30.63 E-value=1.7e+02 Score=28.58 Aligned_cols=38 Identities=8% Similarity=-0.021 Sum_probs=27.2
Q ss_pred hhhhhhhhhcccccCCchhhH-HHhHHHHhhhHhHhhHH
Q 015377 312 GTFIIANIFAPEIYPTSMRST-GAGVAYAVGRIGGMVCP 349 (408)
Q Consensus 312 ~~~~~~~~~~~el~p~~~R~~-a~gi~~~~~~~~~~~~p 349 (408)
......-.+.+++.....+.+ |.+....+..+|+.++-
T Consensus 158 ~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY 196 (498)
T KOG0637|consen 158 TLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGY 196 (498)
T ss_pred hhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeee
Confidence 334556778889998877777 77777777777776653
No 298
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=30.62 E-value=73 Score=22.29 Aligned_cols=33 Identities=3% Similarity=0.180 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHHHHHhHhccccchHHHHHHhhHH
Q 015377 67 VFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIP 102 (408)
Q Consensus 67 ~~~~~~~~G~~l~~~l~~~~~~~~~Wr~~f~i~~i~ 102 (408)
+.+....++.+++-.+++.. .+-+..+++.++-
T Consensus 12 l~~~il~~~~iisfi~Gy~~---q~~~~~~~~~~~g 44 (76)
T PF06645_consen 12 LMQYILIISAIISFIVGYIT---QSFSYTFYIYGAG 44 (76)
T ss_pred HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHH
Confidence 44555566666666666654 3456665554443
No 299
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=29.82 E-value=5.6e+02 Score=25.38 Aligned_cols=35 Identities=6% Similarity=0.008 Sum_probs=28.7
Q ss_pred hhhcCCCcchhHHHHHHHHHHHHHHHHHHHHhHhc
Q 015377 53 MEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVM 87 (408)
Q Consensus 53 ~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~~ 87 (408)
.|.+..+|-.|..+.++.+-+++.++++.+.....
T Consensus 174 Neitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~ 208 (509)
T COG3202 174 NEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLS 208 (509)
T ss_pred HHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 46677788888999999999999999888776654
No 300
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=29.58 E-value=1.4e+02 Score=22.50 Aligned_cols=21 Identities=24% Similarity=0.343 Sum_probs=13.7
Q ss_pred HHHHHHHhhh-chHHHHHHHHH
Q 015377 261 LTAALLVDRV-GRKLSMTIMFI 281 (408)
Q Consensus 261 ~~~~~l~dr~-grR~~~~~~~~ 281 (408)
...||+.||+ |..+..++.++
T Consensus 60 a~iG~llD~~agTsPwglIv~l 81 (116)
T COG5336 60 AGIGWLLDKFAGTSPWGLIVFL 81 (116)
T ss_pred HHHHHHHHHhcCCCcHHHHHHH
Confidence 4567888997 77776554333
No 301
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=28.47 E-value=5.9e+02 Score=25.22 Aligned_cols=42 Identities=17% Similarity=-0.066 Sum_probs=35.4
Q ss_pred hhhhhcccccCCchhhHHHhHHHHhhhHhHhhHHHHHHHHhh
Q 015377 316 IANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVT 357 (408)
Q Consensus 316 ~~~~~~~el~p~~~R~~a~gi~~~~~~~~~~~~p~~~~~l~~ 357 (408)
..|....|+...+.-.+-.++.+..++++..++..+..++..
T Consensus 168 lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 168 LFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 678899999999999999999999999988888777665543
No 302
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=27.37 E-value=91 Score=30.30 Aligned_cols=61 Identities=21% Similarity=0.191 Sum_probs=47.4
Q ss_pred hhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHhHh
Q 015377 26 PNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIV 86 (408)
Q Consensus 26 ~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~ 86 (408)
++-+..++.-++.|+.-|-. ...+.+--+..+++||..+..+..++..+|...|+.+++.+
T Consensus 370 ~~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 370 PGDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred cccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566777889999988864 33444555778889999999999999999999998877653
No 303
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=24.41 E-value=5.1e+02 Score=23.63 Aligned_cols=18 Identities=28% Similarity=0.344 Sum_probs=13.4
Q ss_pred HHHHHHHhhhchHHHHHH
Q 015377 261 LTAALLVDRVGRKLSMTI 278 (408)
Q Consensus 261 ~~~~~l~dr~grR~~~~~ 278 (408)
.+.+-+.||.|||+.-+.
T Consensus 90 tivgSLaDkqGRKracvt 107 (454)
T KOG4332|consen 90 TIVGSLADKQGRKRACVT 107 (454)
T ss_pred HHHHHHHhhhccccceee
Confidence 445678899999986543
No 304
>PHA02902 putative IMV membrane protein; Provisional
Probab=24.12 E-value=1.3e+02 Score=20.02 Aligned_cols=14 Identities=7% Similarity=0.295 Sum_probs=8.4
Q ss_pred cccCCccccccccc
Q 015377 384 FETKGKELVNTIDG 397 (408)
Q Consensus 384 ~et~~~~~~~~~~~ 397 (408)
|+++.+.+.|..++
T Consensus 33 P~~~d~~~~~~l~~ 46 (70)
T PHA02902 33 PDDRDERFGDTLED 46 (70)
T ss_pred CCCccccccccCCC
Confidence 45666666666553
No 305
>KOG2513 consensus Protein required for meiotic chromosome segregation [Cell cycle control, cell division, chromosome partitioning]
Probab=23.99 E-value=3.3e+02 Score=27.52 Aligned_cols=16 Identities=31% Similarity=0.798 Sum_probs=11.8
Q ss_pred HHHHHhccCcchhHhh
Q 015377 107 LIFIVFMPESPRYLCT 122 (408)
Q Consensus 107 ~~~~~~lpESp~~l~~ 122 (408)
.++...+||+|+|...
T Consensus 587 flis~vipe~p~wva~ 602 (647)
T KOG2513|consen 587 FLISSVIPESPRWVAA 602 (647)
T ss_pred HHHHHhcCCChHHHHH
Confidence 3445668999999854
No 306
>PF01350 Flavi_NS4A: Flavivirus non-structural protein NS4A; InterPro: IPR000404 Flaviviruses encode a single polyprotein. This is cleaved into three structural and seven non-structural proteins. The NS4A protein is small and poorly conserved among the Flaviviruses. NS4A contains multiple hydrophobic potential membrane spanning regions []. NS4A has only been found in cells infected by Kunjin virus [].; GO: 0016032 viral reproduction, 0016070 RNA metabolic process, 0044423 virion part
Probab=21.53 E-value=2.5e+02 Score=22.41 Aligned_cols=28 Identities=7% Similarity=0.217 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHHHhccccc-CCccccc
Q 015377 366 LLLEALIVLSVVVILLIPFET-KGKELVN 393 (408)
Q Consensus 366 ~~~~~~~~i~~~~~~~~~~et-~~~~~~~ 393 (408)
--++++.++..+....+.||. |.|+.+|
T Consensus 99 ~~IAg~~lv~filmvVLiPEpg~QRS~~D 127 (144)
T PF01350_consen 99 GQIAGVLLVFFILMVVLIPEPGKQRSQQD 127 (144)
T ss_pred HHhHHHHHHHHHHHHhcccCCCCcCCccc
Confidence 334555555555555566665 3455444
No 307
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=20.71 E-value=36 Score=31.19 Aligned_cols=60 Identities=23% Similarity=0.223 Sum_probs=1.9
Q ss_pred hhHHHHHHHHHHhhccCCcc-hhhhHHHhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHhH
Q 015377 26 PNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWI 85 (408)
Q Consensus 26 ~~~~~l~~~R~l~Gi~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~ 85 (408)
+|-..+++.-++.|+.-|-. ...+.+..+..++++|..+..+..++..+|...|..+++.
T Consensus 246 ~~d~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 246 NSDAWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp ---------------------HHHH------------------------------------
T ss_pred cchHHHHHHHHHHHHccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566777888889988864 3445566688889999999999899999999888877764
No 308
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=20.58 E-value=3.3e+02 Score=19.52 Aligned_cols=41 Identities=17% Similarity=-0.015 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHHHHHhHhccccchHHHHHHhhHHHHHH
Q 015377 66 VVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVL 106 (408)
Q Consensus 66 ~~~~~~~~~G~~l~~~l~~~~~~~~~Wr~~f~i~~i~~~~~ 106 (408)
+.......+|.++|++.+..+......|..+....+...+.
T Consensus 30 g~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~ 70 (85)
T PF06779_consen 30 GWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLS 70 (85)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 45556666777777777666544445555555554444443
Done!