Query 015378
Match_columns 408
No_of_seqs 154 out of 1332
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 11:34:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015378.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015378hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2qmc_A GGT, gamma-glutamyltran 100.0 2E-98 7E-103 758.3 33.5 334 69-405 29-370 (377)
2 2v36_A Gamma-glutamyltranspept 100.0 6.1E-97 2E-101 748.6 36.6 332 68-404 13-352 (376)
3 2dg5_A Gamma-glutamyltranspept 100.0 1.2E-97 4E-102 751.2 30.6 334 68-404 17-358 (366)
4 2e0w_A Gamma-glutamyltranspept 100.0 3.2E-94 1.1E-98 759.8 32.4 334 68-404 17-358 (556)
5 2nlz_A Cephalosporin acylase; 100.0 2.1E-92 7.1E-97 744.8 35.2 327 68-401 16-352 (547)
6 3g9k_L Capsule biosynthesis pr 100.0 1E-91 3.5E-96 695.8 28.3 299 70-392 15-315 (323)
7 2i3o_A Gamma-glutamyltransfera 100.0 1.4E-89 4.9E-94 719.3 30.6 311 67-384 4-317 (516)
8 1apy_A Aspartylglucosaminidase 92.4 0.2 6.8E-06 44.7 6.0 43 81-123 12-55 (162)
9 1k2x_A Putative L-asparaginase 88.7 0.54 1.8E-05 42.5 5.4 41 83-123 32-72 (177)
10 1p4k_A N(4)-(beta-N-acetylgluc 88.1 0.75 2.6E-05 44.7 6.4 46 77-123 7-56 (295)
11 2gez_A L-asparaginase alpha su 87.9 0.64 2.2E-05 42.6 5.4 41 83-123 35-75 (195)
12 4gdv_A L-asparaginase; NTN enz 87.1 0.67 2.3E-05 45.4 5.3 41 83-123 30-70 (310)
13 3c17_A L-asparaginase precurso 79.7 2.1 7.1E-05 42.1 5.4 41 83-123 32-72 (320)
14 2a8j_A Taspase 1, threonine as 76.3 2.8 9.7E-05 42.6 5.4 39 84-123 67-106 (420)
15 1u5t_A Appears to BE functiona 57.5 7.9 0.00027 36.3 3.8 33 261-294 88-124 (233)
16 3cuq_A Vacuolar-sorting protei 54.7 4.5 0.00015 38.0 1.7 72 210-293 23-104 (234)
17 1u5t_B Defective in vacuolar p 32.4 14 0.00048 32.7 1.1 26 264-290 12-46 (169)
18 3cuq_B Vacuolar protein-sortin 31.6 17 0.0006 33.4 1.7 29 262-291 71-103 (218)
19 2xvc_A ESCRT-III, SSO0910; cel 28.9 23 0.00077 26.2 1.5 24 271-294 13-37 (59)
20 3gxq_A Putative regulator of t 25.8 24 0.00081 24.6 1.1 15 82-96 35-49 (54)
21 1x58_A Hypothetical protein 49 24.4 49 0.0017 24.7 2.7 24 170-194 12-35 (62)
No 1
>2qmc_A GGT, gamma-glutamyltranspeptidase; NTN-hydrolase, transferase; HET: GTB; 1.55A {Helicobacter pylori} PDB: 2qm6_A* 3fnm_A* 2nqo_A
Probab=100.00 E-value=2e-98 Score=758.32 Aligned_cols=334 Identities=32% Similarity=0.549 Sum_probs=315.6
Q ss_pred CcccccceEEEcCChHHHHHHHHHHhcCCCHHHHHHHHHHHhhhcCCCCCCCCCCceEEEEeCCCCcEEEEEeeecccCC
Q 015378 69 DIVESEQGVVAADDGRCSEIGASMLRQGGHAVDAAVATALCLGVVNPMASGIGGGSFMIVRSSATSQTQAFDMRETAPLA 148 (408)
Q Consensus 69 ~~~~~~~gaVaa~~~~as~aG~~vL~~GGNAvDAAIAaal~l~Vv~P~~sGiGGg~f~lv~~~~~~~~~~id~re~aP~~ 148 (408)
+...+.+|||+|+||+||++|++||++||||||||||+++|++||+|++||||||+|||||+ +++++++|||||+||.+
T Consensus 29 p~~~~~~g~Vas~~plAs~aG~~IL~~GGNAvDAAVAaa~~L~VveP~~sGiGGggF~li~~-~~~~~~~id~re~AP~~ 107 (377)
T 2qmc_A 29 PIKNTKVGLALSSHPLASEIGQKVLEEGGNAIDAAVAIGFALAVVHPAAGNIGGGGFAVIHL-ANGENVALDFREKAPLK 107 (377)
T ss_dssp -CEESSSEEEECSSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTTCCSSSEEEEEEEC-TTSCEEEEEECCBCCTT
T ss_pred CccccCceEEECCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCCCCCeEEEEEe-CCCCEEEEEeeccCccc
Confidence 34467899999999999999999999999999999999999999999999999999999997 78999999999999999
Q ss_pred CChhhhhCC-----CCCCCCCCCccccccHHHHHHHHHHhcCCCChHHhHHHHHHHHhhCCccChhcHHHHHHhhhhhcC
Q 015378 149 ASQDMYENN-----PGANYAGALSMGVPGEIAGLHEAWLKHGRLAWRTLFQPAIKLAKEGFVVAPYLGRHIAKSGGRILN 223 (408)
Q Consensus 149 ~~~~~~~~~-----~~~~~~G~~sv~VPG~vaGl~~a~~~~G~L~w~~L~~PAI~lA~~Gf~v~~~l~~~l~~~~~~i~~ 223 (408)
++++||.++ +..+..|+++|+|||+|+||+++|+|||+|||++||+|||+|||+||+|++.++..++.....+.+
T Consensus 108 at~d~~~~~~g~~~~~~~~~G~~av~VPG~v~g~~~a~~~~G~Lpw~~ll~PAI~lA~~Gf~Vs~~la~~~~~~~~~l~~ 187 (377)
T 2qmc_A 108 ATKNMFLDKQGNVVPKLSEDGYLAAGVPGTVAGMEAMLKKYGTKKLSQLIDPAIKLAENGYAISQRQAETLKEARERFLK 187 (377)
T ss_dssp CCTTTTBCTTSCBCTTTTTSSGGGCCBCCHHHHHHHHHHHHCCSCHHHHTHHHHHHHHHCEECCHHHHHHHHHHHHHHTT
T ss_pred CCHHHHhhccCCcCCccccCCCcccccchHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHhc
Confidence 999999753 334578999999999999999999999999999999999999999999999999999988888888
Q ss_pred Cccchhhccc-CCcccCCCCeeeCHHHHHHHHHHHHhCCCCccchHHHHHHHHHHHhcCCccCHHHhccCCceeecceEE
Q 015378 224 DRGLQEVFAP-NGKLLKPGDKCYNEKLAQSLEAVAEQGPQALYNGTVGEMLVKDVSKAGGILTMEDLRNYKVNVVDAVSV 302 (408)
Q Consensus 224 ~~~~~~~f~p-~G~~l~~Gd~l~~p~LA~TL~~IA~~G~~~FY~G~iA~~lv~~~~~~GG~lt~~DL~~Y~~~~~~pl~~ 302 (408)
+|+++++|.| +|+++++||+++||+||+|||+||++|+++||+|+||++|+++++++||+||++||++|++++++||++
T Consensus 188 ~p~~~~~f~~~~G~~~~~G~~~~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DLa~y~~~~~~Pl~~ 267 (377)
T 2qmc_A 188 YSSSKKYFFKKGHLDYQEGDLFVQKDLAKTLNQIKTLGAKGFYQGQVAELIEKDMKKNGGIITKEDLASYNVKWRKPVVG 267 (377)
T ss_dssp CHHHHHHHEETTTEECCTTCEECCHHHHHHHHHHHHHTTHHHHSHHHHHHHHHHHHHTTCCCCHHHHHTCCCEEECCEEE
T ss_pred ChhHHhhccCCCCccCCCCCEeeCHHHHHHHHHHHHhCcHhhhCCHHHHHHHHHHHHcCCCCCHHHHhhCCcceeCCeEE
Confidence 9999999986 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCeeEecCCCCCChHHHHHHHHHHHhcCCCCC-CCCChhHHHHHHHHHHHHHHHHh-hcCCCCCCCcchHHhhhCCHH
Q 015378 303 NVMGYTISGMPPPSCGTAGMAMVLNILDSYGSSD-SAKGNLGLHRIIEALKHMFAARM-NLGDPNFVNISSVLSEMLSLS 380 (408)
Q Consensus 303 ~~~g~~v~~~ppPssG~~~l~~~LniLe~~~~~~-~~~~~~~~h~lvEa~k~a~a~R~-~lGDP~f~~v~~~~~~lls~~ 380 (408)
+|+||+||++||||||+++++++|||||+|++.. ..++++++|+++||+|+||++|. ++|||+|++++ +++|||++
T Consensus 268 ~yrg~~v~~~pPPssGG~~~l~~L~iLe~~~l~~~~~~s~~~~H~~~EA~k~AfadR~~~lgDP~f~~vp--~~~LLs~~ 345 (377)
T 2qmc_A 268 SYRGYKIISMSPPSSGGTHLIQILNVMENADLSALGYGASKNIHIAAEAMRQAYADRSVYMGDADFVSVP--VDKLINKA 345 (377)
T ss_dssp EETTEEEEECCTTBSHHHHHHHHHHHHTTSCHHHHCTTCHHHHHHHHHHHHHHHHHHHHHCSCTTTSCCC--HHHHTCHH
T ss_pred EeCCeEEEeCCCCCchHHHHHHHHHHHhcCCccccCCchHHHHHHHHHHHHHHHHHHHHhcCCccccccc--HHHhCCHH
Confidence 9999999999999999888889999999998754 35678999999999999999998 59999999987 79999999
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCC
Q 015378 381 FAKQIQQKIFDNTTFPPDYYMNRYN 405 (408)
Q Consensus 381 ~a~~~r~~I~~~~t~~~~~Y~~~~~ 405 (408)
|+++++++|+++++.++++|.+.+.
T Consensus 346 ya~~~~~~I~~~~a~~~~~~~~~~~ 370 (377)
T 2qmc_A 346 YAKKIFDTIQPDTVTPSSQIKPGMG 370 (377)
T ss_dssp HHHHHHHTCBTTBCCCGGGCCGGGC
T ss_pred HHHHHHHhCCcccCCChhhcCCCCC
Confidence 9999999999999999999988764
No 2
>2v36_A Gamma-glutamyltranspeptidase large chain; transferase, glutathione biosynthesis, gamma-glutamyl transferase, acyltransferase, zymogen; 1.85A {Bacillus subtilis} PDB: 3a75_A*
Probab=100.00 E-value=6.1e-97 Score=748.65 Aligned_cols=332 Identities=33% Similarity=0.540 Sum_probs=309.4
Q ss_pred CCcccccceEEEcCChHHHHHHHHHHhcCCCHHHHHHHHHHHhhhcCCCCCCCCCCceEEEEeCCCCcEEEEEeeecccC
Q 015378 68 ADIVESEQGVVAADDGRCSEIGASMLRQGGHAVDAAVATALCLGVVNPMASGIGGGSFMIVRSSATSQTQAFDMRETAPL 147 (408)
Q Consensus 68 ~~~~~~~~gaVaa~~~~as~aG~~vL~~GGNAvDAAIAaal~l~Vv~P~~sGiGGg~f~lv~~~~~~~~~~id~re~aP~ 147 (408)
++...+.+|||+|+||+||++|++||++||||||||||+++|++||+|++||||||+|||||+++++++++|||||+||.
T Consensus 13 ~~~~~~~~g~Vas~~~lAs~aG~~iL~~GGNAvDAAVA~a~~l~VveP~~sGiGGggf~li~~~~~~~~~~id~re~AP~ 92 (376)
T 2v36_A 13 KQVDVGKDGMVATAHPLASEIGADVLKKGGNAIDAAVAIQFALNVTEPMMSGIGGGGFMMVYDGKTKDTTIIDSRERAPA 92 (376)
T ss_dssp CSBC-CCSEEEEBSSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHSTTTCSTTSEEEEEEECTTTCCEEEEECCCBCCT
T ss_pred CCccccCCeEEECCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCCCCCeEEEEEECCCCcEEEEEeeccCcc
Confidence 44457889999999999999999999999999999999999999999999999999999999877899999999999999
Q ss_pred CCChhhhhCC--CCCC----CCCCCccccccHHHHHHHHHHhcCCCChHHhHHHHHHHHhhCCccChhcHHHHHHhhhhh
Q 015378 148 AASQDMYENN--PGAN----YAGALSMGVPGEIAGLHEAWLKHGRLAWRTLFQPAIKLAKEGFVVAPYLGRHIAKSGGRI 221 (408)
Q Consensus 148 ~~~~~~~~~~--~~~~----~~G~~sv~VPG~vaGl~~a~~~~G~L~w~~L~~PAI~lA~~Gf~v~~~l~~~l~~~~~~i 221 (408)
+++++||.+. ...+ ..|+++|+|||+++||+++|+|||+|||++||+|||+|||+||+|++.++..++.....+
T Consensus 93 ~a~~~~~~~~~g~~~~~~~~~~G~~av~VPG~v~g~~~a~~~~G~Lpw~~ll~PAI~lA~~Gf~Vs~~la~~~~~~~~~l 172 (376)
T 2v36_A 93 GATPDMFLDENGKAIPFSERVTKGTAVGVPGTLKGLEEALDKWGTRSMKQLITPSIKLAEKGFPIDSVLAEAISDYQEKL 172 (376)
T ss_dssp TCCTTTTBCSSSCBCCHHHHTTSGGGCCBCCHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHCEECCHHHHHHHHHTHHHH
T ss_pred cCCHhHhhhccCCcCCcccccCCCccccCchHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHh
Confidence 9999999743 1223 689999999999999999999999999999999999999999999999999999888878
Q ss_pred cCCccchhhcccCCcccCCCCeeeCHHHHHHHHHHHHhCCCCccchHHHHHHHHHHHhcCCccCHHHhccCCceeecceE
Q 015378 222 LNDRGLQEVFAPNGKLLKPGDKCYNEKLAQSLEAVAEQGPQALYNGTVGEMLVKDVSKAGGILTMEDLRNYKVNVVDAVS 301 (408)
Q Consensus 222 ~~~~~~~~~f~p~G~~l~~Gd~l~~p~LA~TL~~IA~~G~~~FY~G~iA~~lv~~~~~~GG~lt~~DL~~Y~~~~~~pl~ 301 (408)
.+ |+++++|.|+|+++++||+++||+||+|||+||++|+++||+|+||++|+++++++||+||++||++|++++++||+
T Consensus 173 ~~-~~~~~~f~~~G~~~~~G~~~~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DLa~y~~~~~~Pl~ 251 (376)
T 2v36_A 173 SR-TAAKDVFLPNGEPLKEGDTLIQKDLAKTFKLIRSKGTDAFYKGKFAKTLSDTVQDFGGSMTEKDLENYDITIDEPIW 251 (376)
T ss_dssp TT-STTHHHHSTTSSCCCTTCEECCHHHHHHHHHHHHHCTHHHHSHHHHHHHHHHHHHTTCCCCHHHHHHCCCEEECCEE
T ss_pred cC-hhHHHHhccCCccCCCCCEEECHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHcCCCCCHHHHhhCCcceeCceE
Confidence 88 99999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeCCeeEecCCCCCChHHHHHHHHHHHhcCCCCCC-CCChhHHHHHHHHHHHHHHHHh-hcCCCCCCCcchHHhhhCCH
Q 015378 302 VNVMGYTISGMPPPSCGTAGMAMVLNILDSYGSSDS-AKGNLGLHRIIEALKHMFAARM-NLGDPNFVNISSVLSEMLSL 379 (408)
Q Consensus 302 ~~~~g~~v~~~ppPssG~~~l~~~LniLe~~~~~~~-~~~~~~~h~lvEa~k~a~a~R~-~lGDP~f~~v~~~~~~lls~ 379 (408)
++|+||+||++||||||+++++++|||||+|++... .++++++|+++||+|+||++|. ++|||+|++++ +++|||+
T Consensus 252 ~~yrg~~v~~~pPPssGG~~~l~~L~iLe~~~~~~~~~~s~~~~H~~~EA~k~A~adR~~~lgDp~f~~vp--~~~Lls~ 329 (376)
T 2v36_A 252 GDYQGYQIATTPPPSSGGIFLLQMPKILDHFNLSQYDVRSWEKYQLLAETMHLSYADRASYAGDPEFVNVP--LKGLLHP 329 (376)
T ss_dssp EEETTEEEEECCTTBSHHHHHHHHHHHHHTTCCC--CTTCHHHHHHHHHHHHHHHHHHHHHCSCTTTSCCC--HHHHHCH
T ss_pred EEeCCeEEEECCCCCcHHHHHHHHHHHHhcCCccccCCCcHHHHHHHHHHHHHHHHHHHHhcCCcccccCC--HHHhcCH
Confidence 999999999999999998888999999999998653 5678999999999999999998 59999999988 7999999
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCC
Q 015378 380 SFAKQIQQKIFDNTTFPPDYYMNRY 404 (408)
Q Consensus 380 ~~a~~~r~~I~~~~t~~~~~Y~~~~ 404 (408)
+|+++++++|++ +.++++|.+.+
T Consensus 330 ~y~~~~~~~I~~--~~~~~~~~~~~ 352 (376)
T 2v36_A 330 DYIKERQQLINL--DQVNKKPKAGD 352 (376)
T ss_dssp HHHHHHHHTCBT--TBCCSSCCCCC
T ss_pred HHHHHHHHhccc--cccccccCCCC
Confidence 999999999987 55666776644
No 3
>2dg5_A Gamma-glutamyltranspeptidase; gamma-glutamyltransferase, GGT, gamma-GT, glutathione; HET: GLU; 1.60A {Escherichia coli K12} SCOP: d.153.1.6 PDB: 2dbu_A 2dbw_A* 2dbx_A* 2e0x_A 2e0y_A 2z8i_A* 2z8j_A* 2z8k_A*
Probab=100.00 E-value=1.2e-97 Score=751.18 Aligned_cols=334 Identities=35% Similarity=0.587 Sum_probs=313.8
Q ss_pred CCcccccceEEEcCChHHHHHHHHHHhcCCCHHHHHHHHHHHhhhcCCCCCCCCCCceEEEEeCCCCcEEEEEeeecccC
Q 015378 68 ADIVESEQGVVAADDGRCSEIGASMLRQGGHAVDAAVATALCLGVVNPMASGIGGGSFMIVRSSATSQTQAFDMRETAPL 147 (408)
Q Consensus 68 ~~~~~~~~gaVaa~~~~as~aG~~vL~~GGNAvDAAIAaal~l~Vv~P~~sGiGGg~f~lv~~~~~~~~~~id~re~aP~ 147 (408)
|+.+.+.+|||+|+||+||++|++||++||||||||||+++|++||+|++||||||+||+||++ ++++++|||||+||.
T Consensus 17 r~~~~~~~g~Vas~~~lAs~aG~~iL~~GGNAvDAAVA~a~~l~VveP~~~GiGGggF~li~~~-~~~~~~id~re~AP~ 95 (366)
T 2dg5_A 17 FHPVRAKQGMVASVDATATQVGVDILKEGGNAVDAAVAVGYALAVTHPQAGNLGGGGFMLIRSK-NGNTTAIDFREMAPA 95 (366)
T ss_dssp SCCEEESSCEEEESCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTTCCSSSEEEEEEECT-TSCEEEEEECCBCCT
T ss_pred CCccccCceEEECCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhccccCCCCCCeEEEEEcC-CCCEEEEeeeecCcc
Confidence 6678889999999999999999999999999999999999999999999999999999999965 889999999999999
Q ss_pred CCChhhhhCCC-----CCCCCCCCccccccHHHHHHHHHHhcCCCChHHhHHHHHHHHhhCCccChhcHHHHHHhhhhhc
Q 015378 148 AASQDMYENNP-----GANYAGALSMGVPGEIAGLHEAWLKHGRLAWRTLFQPAIKLAKEGFVVAPYLGRHIAKSGGRIL 222 (408)
Q Consensus 148 ~~~~~~~~~~~-----~~~~~G~~sv~VPG~vaGl~~a~~~~G~L~w~~L~~PAI~lA~~Gf~v~~~l~~~l~~~~~~i~ 222 (408)
+++++||.++. ..+..|+++|+|||+|+||+++|+|||+|||++||+|||+|||+||+|++.++..++.....+.
T Consensus 96 ~a~~~~~~~~~g~~~~~~~~~G~~av~VPG~v~g~~~a~~~~G~Lpw~~ll~PAI~lA~~Gf~Vs~~la~~~~~~~~~l~ 175 (366)
T 2dg5_A 96 KATRDMFLDDQGNPDSKKSLTSHLASGTPGTVAGFSLALDKYGTMPLNKVVQPAFKLARDGFIVNDALADDLKTYGSEVL 175 (366)
T ss_dssp TCCTTTTBCTTSCBCHHHHHTSGGGCCBCCHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHCEECCHHHHHHHHHTGGGTG
T ss_pred cCCHHHHhhccCCcCCCccCCCCcccccchHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHh
Confidence 99999997541 2344899999999999999999999999999999999999999999999999999998878888
Q ss_pred CCccchhhc-ccCCcccCCCCeeeCHHHHHHHHHHHHhCCCCccchHHHHHHHHHHHhcCCccCHHHhccCCceeecceE
Q 015378 223 NDRGLQEVF-APNGKLLKPGDKCYNEKLAQSLEAVAEQGPQALYNGTVGEMLVKDVSKAGGILTMEDLRNYKVNVVDAVS 301 (408)
Q Consensus 223 ~~~~~~~~f-~p~G~~l~~Gd~l~~p~LA~TL~~IA~~G~~~FY~G~iA~~lv~~~~~~GG~lt~~DL~~Y~~~~~~pl~ 301 (408)
++|+++++| .|+|+++++||+++||+||+|||+||++|+++||+|+||++|+++++++||+||++||++|++++++||+
T Consensus 176 ~~~~~~~~f~~~~G~~~~~G~~~~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DLa~y~~~~~~Pl~ 255 (366)
T 2dg5_A 176 PNHENSKAIFWKEGEPLKKGDTLVQANLAKSLEMIAENGPDEFYKGTIAEQIAQEMQKNGGLITKEDLAAYKAVERTPIS 255 (366)
T ss_dssp GGSHHHHHHHEETTEECCTTCEECCHHHHHHHHHHHHHCTHHHHTSHHHHHHHHHHHHTTCCCCHHHHHHCCCEEECCEE
T ss_pred cCchHHHHhcCCCCeECCCCCEeeCHHHHHHHHHHHHhCchhccCCHHHHHHHHHHHHcCCCCCHHHHhhCCCceeCCeE
Confidence 888888888 4899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeCCeeEecCCCCCChHHHHHHHHHHHhcCCCCC-CCCChhHHHHHHHHHHHHHHHHh-hcCCCCCCCcchHHhhhCCH
Q 015378 302 VNVMGYTISGMPPPSCGTAGMAMVLNILDSYGSSD-SAKGNLGLHRIIEALKHMFAARM-NLGDPNFVNISSVLSEMLSL 379 (408)
Q Consensus 302 ~~~~g~~v~~~ppPssG~~~l~~~LniLe~~~~~~-~~~~~~~~h~lvEa~k~a~a~R~-~lGDP~f~~v~~~~~~lls~ 379 (408)
++|+||+||++|||||||++++++|||||+|++.. ..++++++|+++||+|+||++|. ++|||+|++++ +++|||+
T Consensus 256 ~~yrg~~v~~~pPpssgG~~~l~~L~iLe~~~~~~~~~~s~~~~H~~~EA~k~A~adR~~~lgDp~f~~vp--~~~Lls~ 333 (366)
T 2dg5_A 256 GDYRGYQVYSMPPPSSGGIHIVQILNILENFDMKKYGFGSADAMQIMAEAEKYAYADRSEYLGDPDFVKVP--WQALTNK 333 (366)
T ss_dssp EEETTEEEEECCTTBSHHHHHHHHHHHHTTSCHHHHCTTCHHHHHHHHHHHHHHHHHHHHHCSCTTTSCCC--HHHHTCH
T ss_pred EEeCCeEEEECCCCchHHHHHHHHHHhccccCccccCCchHHHHHHHHHHHHHHHHHHHHhcCCcccccch--HHHhCCH
Confidence 99999999999999998888889999999998754 35678999999999999999998 59999999987 6899999
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCC
Q 015378 380 SFAKQIQQKIFDNTTFPPDYYMNRY 404 (408)
Q Consensus 380 ~~a~~~r~~I~~~~t~~~~~Y~~~~ 404 (408)
+|+++++++|++++++++++|.+..
T Consensus 334 ~ya~~~~~~I~~~~~~~~~~~~~~~ 358 (366)
T 2dg5_A 334 AYAKSIADQIDINKAKPSSEIRPGK 358 (366)
T ss_dssp HHHHHHHTTCBTTBCCCGGGCCCCC
T ss_pred HHHHHHHHhcCcccCCChhhcCCCC
Confidence 9999999999999999988888753
No 4
>2e0w_A Gamma-glutamyltranspeptidase; NTN hydrolase, precursor, gamma-GTP, post-translational PROC maturation, transferase; 2.55A {Escherichia coli K12} SCOP: d.153.1.6
Probab=100.00 E-value=3.2e-94 Score=759.78 Aligned_cols=334 Identities=35% Similarity=0.587 Sum_probs=297.8
Q ss_pred CCcccccceEEEcCChHHHHHHHHHHhcCCCHHHHHHHHHHHhhhcCCCCCCCCCCceEEEEeCCCCcEEEEEeeecccC
Q 015378 68 ADIVESEQGVVAADDGRCSEIGASMLRQGGHAVDAAVATALCLGVVNPMASGIGGGSFMIVRSSATSQTQAFDMRETAPL 147 (408)
Q Consensus 68 ~~~~~~~~gaVaa~~~~as~aG~~vL~~GGNAvDAAIAaal~l~Vv~P~~sGiGGg~f~lv~~~~~~~~~~id~re~aP~ 147 (408)
++++.+.+|||+|+||+||++|++||++||||||||||+++||+||+|++||||||+|||||+ +++++++|||||+||.
T Consensus 17 ~~~v~~~~g~Vas~~plAs~aG~~iL~~GGNAvDAAVA~~~~l~VveP~~sGiGGggf~lv~~-~~~~~~~id~re~AP~ 95 (556)
T 2e0w_A 17 FHPVRAKQGMVASVDATATQVGVDILKEGGNAVDAAVAVGYALAVTHPQAGNLGGGGFMLIRS-KNGNTTAIDFREMAPA 95 (556)
T ss_dssp SCCEEESSCEEEESSHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHCTTTCCSSSEEEEEEEC-TTSCEEEEEECCBCCC
T ss_pred cCceeccceEEECCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhhcccccCCCCCeEEEEEe-CCCCEEEEEeeccCcc
Confidence 556778999999999999999999999999999999999999999999999999999999997 7899999999999999
Q ss_pred CCChhhhhCC-----CCCCCCCCCccccccHHHHHHHHHHhcCCCChHHhHHHHHHHHhhCCccChhcHHHHHHhhhhhc
Q 015378 148 AASQDMYENN-----PGANYAGALSMGVPGEIAGLHEAWLKHGRLAWRTLFQPAIKLAKEGFVVAPYLGRHIAKSGGRIL 222 (408)
Q Consensus 148 ~~~~~~~~~~-----~~~~~~G~~sv~VPG~vaGl~~a~~~~G~L~w~~L~~PAI~lA~~Gf~v~~~l~~~l~~~~~~i~ 222 (408)
+++++||.+. +..+..|+++|+|||+++||+++|+|||+|||++||+|||+|||+||+|++.++..++.....+.
T Consensus 96 ~at~d~~~~~~g~~~~~~~~~G~~av~VPG~v~g~~~a~~~~G~Lpw~~ll~PAI~lA~~Gf~V~~~la~~~~~~~~~l~ 175 (556)
T 2e0w_A 96 KATRDMFLDDQGNPDSKKSLTSHLASGTPGTVAGFSLALDKYGTMPLNKVVQPAFKLARDGFIVNDALADDLKTYGSEVL 175 (556)
T ss_dssp C--------------------CCCCCCBCCHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHCEECCHHHHHHHHHTHHHHS
T ss_pred cCCHhHHhhccCCcCCccccCCccccccchhHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCcCCHHHHHHHHHhHHHhh
Confidence 9999999653 33457899999999999999999999999999999999999999999999999999998888888
Q ss_pred CCccchhhcc-cCCcccCCCCeeeCHHHHHHHHHHHHhCCCCccchHHHHHHHHHHHhcCCccCHHHhccCCceeecceE
Q 015378 223 NDRGLQEVFA-PNGKLLKPGDKCYNEKLAQSLEAVAEQGPQALYNGTVGEMLVKDVSKAGGILTMEDLRNYKVNVVDAVS 301 (408)
Q Consensus 223 ~~~~~~~~f~-p~G~~l~~Gd~l~~p~LA~TL~~IA~~G~~~FY~G~iA~~lv~~~~~~GG~lt~~DL~~Y~~~~~~pl~ 301 (408)
++|+++++|. |+|+++++||+++||+||+|||+||++|+++||+|+||++|+++++++||+||++||++|++++++||+
T Consensus 176 ~~p~~~~~f~~~~G~~~~~G~~~~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DLa~y~~~~~~Pl~ 255 (556)
T 2e0w_A 176 PNHENSKAIFWKEGEPLKKGDTLVQANLAKSLEMIAENGPDEFYKGTIAEQIAQEMQKNGGLITKEDLAAYKAVERTPIS 255 (556)
T ss_dssp TTSHHHHHHHEETTEECCTTCEECCHHHHHHHHHHHHHCTHHHHHSHHHHHHHHHHHHSSCCCCHHHHHTCCCEEECCEE
T ss_pred cCchHHHhccCCCCccCCCCCEeeCHHHHHHHHHHHhhCcccccCCHHHHHHHHHHHHcCCCcCHHHHhhCCcceeCceE
Confidence 8999999998 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeCCeeEecCCCCCChHHHHHHHHHHHhcCCCCCC-CCChhHHHHHHHHHHHHHHHHh-hcCCCCCCCcchHHhhhCCH
Q 015378 302 VNVMGYTISGMPPPSCGTAGMAMVLNILDSYGSSDS-AKGNLGLHRIIEALKHMFAARM-NLGDPNFVNISSVLSEMLSL 379 (408)
Q Consensus 302 ~~~~g~~v~~~ppPssG~~~l~~~LniLe~~~~~~~-~~~~~~~h~lvEa~k~a~a~R~-~lGDP~f~~v~~~~~~lls~ 379 (408)
++|+||+||++||||||+++++++|||||+|++... .++++++|+++||+|+||++|. ++|||+|++++ +++|||+
T Consensus 256 ~~yrg~~v~~~pPpssGG~~~l~~L~iLe~~~~~~~~~~s~~~~H~~~EA~k~A~adR~~~lgDp~f~~vp--~~~Lls~ 333 (556)
T 2e0w_A 256 GDYRGYQVYSMPPPSSGGIHIVQILNILENFDMKKYGFGSADAMQIMAEAEKYAYADRSEYLGDPDFVKVP--WQALTNK 333 (556)
T ss_dssp EEETTEEEEECCTTBSSHHHHHHHHHHHHTSCSSSSCTTCHHHHHHHHHHHHHHHHHHGGGC-------CC--GGGGGCH
T ss_pred EEeCCeEEEECCCCCcHHHHHHHHHHHHhcCCccccCCchHHHHHHHHHHHHHHHHHHHHhcCCccccccc--HHHhcCH
Confidence 999999999999999998888899999999998653 5678999999999999999998 59999999887 6899999
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCC
Q 015378 380 SFAKQIQQKIFDNTTFPPDYYMNRY 404 (408)
Q Consensus 380 ~~a~~~r~~I~~~~t~~~~~Y~~~~ 404 (408)
+|+++++++|+++++.++.+|++.+
T Consensus 334 ~ya~~~~~~I~~~~a~~~~~~~~~~ 358 (556)
T 2e0w_A 334 AYAKSIADQIDINKAKPSSEIRPGK 358 (556)
T ss_dssp HHHHHHHHHCCSSCCCCHHHHSCC-
T ss_pred HHHHHHHHhcCccccCCccccCCCC
Confidence 9999999999999998887776654
No 5
>2nlz_A Cephalosporin acylase; structural genomics, protein structure initiative, PSI, nysgxrc; 2.70A {Bacillus halodurans} SCOP: d.153.1.6
Probab=100.00 E-value=2.1e-92 Score=744.79 Aligned_cols=327 Identities=26% Similarity=0.445 Sum_probs=308.8
Q ss_pred CCcccccceEEEcCChHHHHHHHHHHhcCCCHHHHHHHHHHHhhhcCCCCCCCCCCceEEEEeCCCCcEEEEEeeecccC
Q 015378 68 ADIVESEQGVVAADDGRCSEIGASMLRQGGHAVDAAVATALCLGVVNPMASGIGGGSFMIVRSSATSQTQAFDMRETAPL 147 (408)
Q Consensus 68 ~~~~~~~~gaVaa~~~~as~aG~~vL~~GGNAvDAAIAaal~l~Vv~P~~sGiGGg~f~lv~~~~~~~~~~id~re~aP~ 147 (408)
++.+.+.+|||+|+||+||++|++||++||||||||||+++||+||+|++||||||+|||||+. + ++++|||||+||+
T Consensus 16 r~~v~~~~g~Vas~~plAs~aG~~iL~~GGNAvDAAVA~~~~l~VveP~~sGiGGggf~lv~~~-~-~~~~id~re~AP~ 93 (547)
T 2nlz_A 16 RNVVYAKNGMVATSQPLAAQAGLDILKAGGNAIDAAIATATALTVLEPTSNGIGSDAFALVWTK-G-KLHGLNGSGRAPM 93 (547)
T ss_dssp CCCEEESSEEEEESSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTSCCTBCEEEEEEEET-T-EEEEEEECCCCCT
T ss_pred CCccccCCeEEECCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCCCCceEEEEEEC-C-ceEEEecccCCcc
Confidence 6678889999999999999999999999999999999999999999999999999999999975 4 8999999999999
Q ss_pred CCChhhhhCCC---CCCCCCCCccccccHHHHHHHHHHhcCCCChHHhHHHHHHHHhhCCccChhcHHHHHHhhhhhcCC
Q 015378 148 AASQDMYENNP---GANYAGALSMGVPGEIAGLHEAWLKHGRLAWRTLFQPAIKLAKEGFVVAPYLGRHIAKSGGRILND 224 (408)
Q Consensus 148 ~~~~~~~~~~~---~~~~~G~~sv~VPG~vaGl~~a~~~~G~L~w~~L~~PAI~lA~~Gf~v~~~l~~~l~~~~~~i~~~ 224 (408)
+++++||.++. ..+..|+++|+|||+++||+++|+|||+|||++||+|||+|||+||+|++.++..++.....+.++
T Consensus 94 ~a~~~~~~~~g~~~~~~~~G~~av~VPG~v~g~~~a~~~~G~Lpw~~ll~PAI~lA~~Gf~Vs~~la~~~~~~~~~l~~~ 173 (547)
T 2nlz_A 94 SLTMEAVKAKGYEQELPPYGVIPVTVPGAPGAWAELAKMYGNLPLAASLAPAIRYAEEGYPVTPTLAKYWKAAYDRVKTE 173 (547)
T ss_dssp TCCHHHHHTTTCCSSCCSSSSTTCCCCCHHHHHHHHHHHHCSSCHHHHTHHHHHHHHHCEECCHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHhhcCCCccCCCCCCcccccchHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCccCHHHHHHHHHHHHHHhcC
Confidence 99999997542 467789999999999999999999999999999999999999999999999999999887778888
Q ss_pred cc------chhhcccCCcccCCCCeeeCHHHHHHHHHHHHhCCCCccchHHHHHHHHHHHhcCCccCHHHhccCCceeec
Q 015378 225 RG------LQEVFAPNGKLLKPGDKCYNEKLAQSLEAVAEQGPQALYNGTVGEMLVKDVSKAGGILTMEDLRNYKVNVVD 298 (408)
Q Consensus 225 ~~------~~~~f~p~G~~l~~Gd~l~~p~LA~TL~~IA~~G~~~FY~G~iA~~lv~~~~~~GG~lt~~DL~~Y~~~~~~ 298 (408)
|+ ++++|.|+|+++++||+++||+||+|||+||++|+++||+|+||++|+++++++||+||++||++|++++++
T Consensus 174 p~~~~~~~~~~~f~~~G~~~~~G~~~~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DLa~y~~~~~~ 253 (547)
T 2nlz_A 174 WTDDVYQPWFDTFAPKGRAPRVGEVWRSQGHADTLRSIAESNGESFYRGELADQIHAFFDKHGGYLTKEDLACYRPEWVE 253 (547)
T ss_dssp CCSSTTHHHHHHHCTTSSCCCTTCEECCHHHHHHHHHHHTTTTHHHHHSHHHHHHHHHHHHTTCCCCHHHHHTCCCEEEC
T ss_pred CcccchhhHHHHcccCCccCCCCCEecCHHHHHHHHHHHHhCchhhcCCHHHHHHHHHHHhcCCCCCHHHHhhCCceeeC
Confidence 88 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEeeCCeeEecCCCCCChHHHHHHHHHHHhcCCCCCCCCChhHHHHHHHHHHHHHHHHh-hcCCCCCCCcchHHhhhC
Q 015378 299 AVSVNVMGYTISGMPPPSCGTAGMAMVLNILDSYGSSDSAKGNLGLHRIIEALKHMFAARM-NLGDPNFVNISSVLSEML 377 (408)
Q Consensus 299 pl~~~~~g~~v~~~ppPssG~~~l~~~LniLe~~~~~~~~~~~~~~h~lvEa~k~a~a~R~-~lGDP~f~~v~~~~~~ll 377 (408)
||+++|+||+||++||||||.+ ++++|||||+|++.. .++++++|+++||+|+||++|. ++|||+|++++ +++||
T Consensus 254 Pl~~~yrg~~v~~~pPps~G~~-~l~~L~iLe~~~l~~-~~s~~~~H~~~EA~k~A~adR~~~lgDp~f~~vp--~~~Ll 329 (547)
T 2nlz_A 254 PISIDYRGYRVWEIPPNGQGLV-ALEALNIVKGFEFYH-KDTVDTYHKQIEAMKLAFVDGMKYVTEPSDMSVS--VEQLL 329 (547)
T ss_dssp CEEEEETTEEEEECCTTBTTHH-HHHHHHHHTTSCCSC-SSSHHHHHHHHHHHHHHHHHHHHHCSSGGGCSSC--HHHHT
T ss_pred CeEEEeCCceEEECCCCcHHHH-HHHHHHHHhcCCCCC-CCcHHHHHHHHHHHHHHHHHHHHhcCCccccccc--HHHhc
Confidence 9999999999999999999966 779999999999876 6789999999999999999997 79999999987 79999
Q ss_pred CHHHHHHHHhhcCCCCCCCCCCCC
Q 015378 378 SLSFAKQIQQKIFDNTTFPPDYYM 401 (408)
Q Consensus 378 s~~~a~~~r~~I~~~~t~~~~~Y~ 401 (408)
|++|+++++++|+++ +.++.++.
T Consensus 330 s~~ya~~~~~~I~~~-a~~~~~~~ 352 (547)
T 2nlz_A 330 SDEYATERRKEIGEQ-ALTPEPGT 352 (547)
T ss_dssp CHHHHHHHHTTCCSS-CCCCCCCC
T ss_pred CHHHHHHHHHhcccc-cCCCCCCC
Confidence 999999999999987 66665543
No 6
>3g9k_L Capsule biosynthesis protein CAPD; CAPD protein, the great lakes regional C excellence, GLRCE, capsule biogenesis/degradation; HET: GLU; 1.79A {Bacillus anthracis} PDB: 3ga9_L*
Probab=100.00 E-value=1e-91 Score=695.82 Aligned_cols=299 Identities=31% Similarity=0.498 Sum_probs=266.4
Q ss_pred cccccceEEEcCChHHHHHHHHHHhcCCCHHHHHHHHHHHhhhcCCCCCCCCCCceEEEEeCCCCcEEEEEeeecccCCC
Q 015378 70 IVESEQGVVAADDGRCSEIGASMLRQGGHAVDAAVATALCLGVVNPMASGIGGGSFMIVRSSATSQTQAFDMRETAPLAA 149 (408)
Q Consensus 70 ~~~~~~gaVaa~~~~as~aG~~vL~~GGNAvDAAIAaal~l~Vv~P~~sGiGGg~f~lv~~~~~~~~~~id~re~aP~~~ 149 (408)
....++|||+|+||+||++|++||++||||||||||+++|++||+|++||||||+||+||+++ +++ +|||||+||.++
T Consensus 15 ~~~~~~g~Vas~~~lAs~aG~~iL~~GGNAvDAAVA~a~~l~VveP~~sGiGGggf~li~~~~-~~~-~id~r~~AP~~a 92 (323)
T 3g9k_L 15 MGDKGTYGVSASHPLAVEEGMKVLKNGGSAVDAAIVVSYVLGVVELHASGIGGGGGMLIISKD-KET-FIDYRETTPYFT 92 (323)
T ss_dssp ---CCCCEEEESSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTTTCCTTSEEEEEEECSS-CEE-EEECCCBCCC--
T ss_pred CCCCCCeEEECCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCCCCCeEEEEEeCC-CCE-EEEeeccCcHhH
Confidence 345569999999999999999999999999999999999999999999999999999999664 788 999999999976
Q ss_pred ChhhhhCCCCCCCCCCCccccccHHHHHHHHHHhcCCCChHHhHHHHHHHHhhCCccChhcHHHHHHhhhhhcCCccchh
Q 015378 150 SQDMYENNPGANYAGALSMGVPGEIAGLHEAWLKHGRLAWRTLFQPAIKLAKEGFVVAPYLGRHIAKSGGRILNDRGLQE 229 (408)
Q Consensus 150 ~~~~~~~~~~~~~~G~~sv~VPG~vaGl~~a~~~~G~L~w~~L~~PAI~lA~~Gf~v~~~l~~~l~~~~~~i~~~~~~~~ 229 (408)
..|.++|+|||+++||+++|++||+|||++||+|||+|||+||+|++.++..++.....+..+|+++
T Consensus 93 ------------~~G~~av~VPG~v~g~~~a~~~~G~Lpw~~ll~PAI~lA~~Gf~Vs~~la~~~~~~~~~l~~~~~~~- 159 (323)
T 3g9k_L 93 ------------GNQKPHIGVPGFVAGMEYIHDNYGSLPMGELLQPAINYAEKGFKVDDSLTMRLDLAKPRIYSDKLSI- 159 (323)
T ss_dssp ----------------CCCCBCCHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHCEECCHHHHHHHHHHHHHHCCTTCGG-
T ss_pred ------------hcCCCcccCchHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCccCHHHHHHHHHHHHHHhcCCccc-
Confidence 2477999999999999999999999999999999999999999999999999998888888889888
Q ss_pred hcccCCcccCCCCeeeCHHHHHHHHHHHHhCCCCccchHHHHHHHHHHHhcCCccCHHHhccCCceeecceEEeeCCeeE
Q 015378 230 VFAPNGKLLKPGDKCYNEKLAQSLEAVAEQGPQALYNGTVGEMLVKDVSKAGGILTMEDLRNYKVNVVDAVSVNVMGYTI 309 (408)
Q Consensus 230 ~f~p~G~~l~~Gd~l~~p~LA~TL~~IA~~G~~~FY~G~iA~~lv~~~~~~GG~lt~~DL~~Y~~~~~~pl~~~~~g~~v 309 (408)
|.|+|+++++||+++||+||+||++||++|+++||+|+||++|+++ |+||.+||++|++++++||+++|+||+|
T Consensus 160 -f~~~G~~~~~G~~~~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~-----G~lt~~DLa~y~~~~~~Pl~~~yrg~~v 233 (323)
T 3g9k_L 160 -FYPNGEPIETGETLIQTDLARTLKKIQKEGAKGFYEGGVARAISKT-----AKISLEDIKGYKVEVRKPVKGNYMGYDV 233 (323)
T ss_dssp -GSGGGSCCCTTCEECCHHHHHHHHHHHHHTTHHHHSHHHHHHHHHH-----HTCCHHHHHTCCCEEECCEEEEETTEEE
T ss_pred -ccCCCCCCCCCCEEECHHHHHHHHHHHHhCcccccCCHHHHHHHHc-----CCCCHHHHhhCCceEeCCEEEEeCCeEE
Confidence 8889999999999999999999999999999999999999999998 9999999999999999999999999999
Q ss_pred ecCCCCCChHHHHHHHHHHHhcCCCCC-CCCChhHHHHHHHHHHHHHHHHh-hcCCCCCCCcchHHhhhCCHHHHHHHHh
Q 015378 310 SGMPPPSCGTAGMAMVLNILDSYGSSD-SAKGNLGLHRIIEALKHMFAARM-NLGDPNFVNISSVLSEMLSLSFAKQIQQ 387 (408)
Q Consensus 310 ~~~ppPssG~~~l~~~LniLe~~~~~~-~~~~~~~~h~lvEa~k~a~a~R~-~lGDP~f~~v~~~~~~lls~~~a~~~r~ 387 (408)
|++||||||.+ ++++|||||+|++.. ..++++++|+++||+|+||++|. ++|||+|+++| +++|||++|++++++
T Consensus 234 ~~~pPpssG~~-~l~~L~ile~~~~~~~~~~~~~~~H~~~EA~k~A~adR~~~lgDP~f~~vp--~~~Lls~~ya~~~~~ 310 (323)
T 3g9k_L 234 YTAPPPFSGVT-LLQMLKLAEKKEVYKDVDHTATYMSKMEEISRIAYQDRKKNLGDPNYVNMD--PNKMVSDKYISTMKN 310 (323)
T ss_dssp EECCTTSCHHH-HHHHHHHHHHTTGGGGTTSHHHHHHHHHHHHHHHHHHHHHTTCC------C--HHHHTSHHHHHTCC-
T ss_pred EeCCCCCHHHH-HHHHHHHHhcCCCccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCcccccCC--HHHhCCHHHHHHHHH
Confidence 99999999776 669999999999865 35678999999999999999998 59999999988 789999999999999
Q ss_pred hcCCC
Q 015378 388 KIFDN 392 (408)
Q Consensus 388 ~I~~~ 392 (408)
+|++.
T Consensus 311 ~I~d~ 315 (323)
T 3g9k_L 311 ENGDA 315 (323)
T ss_dssp -----
T ss_pred hcCcc
Confidence 99864
No 7
>2i3o_A Gamma-glutamyltransferase related protein; structural genomics, PSI, protein structure initiative; 2.03A {Thermoplasma acidophilum} SCOP: d.153.1.6
Probab=100.00 E-value=1.4e-89 Score=719.27 Aligned_cols=311 Identities=25% Similarity=0.410 Sum_probs=286.4
Q ss_pred CCCcccccceEEEcCChHHHHHHHHHHhcCCCHHHHHHHHHHHhhhcCCCCCCCCCCceEEEEeCCCCcEEEEEeeeccc
Q 015378 67 GADIVESEQGVVAADDGRCSEIGASMLRQGGHAVDAAVATALCLGVVNPMASGIGGGSFMIVRSSATSQTQAFDMRETAP 146 (408)
Q Consensus 67 ~~~~~~~~~gaVaa~~~~as~aG~~vL~~GGNAvDAAIAaal~l~Vv~P~~sGiGGg~f~lv~~~~~~~~~~id~re~aP 146 (408)
+|+.+.+.+|||+|+||+||++|++||++||||||||||+++|++||+|++||||||+|||||++ ++++++|||||+||
T Consensus 4 ~r~~~~~~~g~Vas~~~lAs~aG~~iL~~GGNAvDAAVA~~~~l~VveP~~~GiGGggf~lv~~~-~~~~~~id~r~~AP 82 (516)
T 2i3o_A 4 SRPNALSQRSVIASSSELASLAGRDILKRGGNIFDAALAVSAMLCVTQNNLCGLGGDLFALIRDE-NGQIMDLNGSGQAS 82 (516)
T ss_dssp SSCCEEESSEEEEESBHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHSTTSCCTTSEEEEEEECT-TCCEEEEEECCCBC
T ss_pred CCCccccCCeEEECCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCCCCceEEEEEeC-CCcEEEEECCcCCc
Confidence 36678899999999999999999999999999999999999999999999999999999999975 88999999999999
Q ss_pred CCCChhhhhCC--CCCCCCCCCc-cccccHHHHHHHHHHhcCCCChHHhHHHHHHHHhhCCccChhcHHHHHHhhhhhcC
Q 015378 147 LAASQDMYENN--PGANYAGALS-MGVPGEIAGLHEAWLKHGRLAWRTLFQPAIKLAKEGFVVAPYLGRHIAKSGGRILN 223 (408)
Q Consensus 147 ~~~~~~~~~~~--~~~~~~G~~s-v~VPG~vaGl~~a~~~~G~L~w~~L~~PAI~lA~~Gf~v~~~l~~~l~~~~~~i~~ 223 (408)
++++++||.++ ...+..|+++ |+|||+++||+++|+|||+|||++||+|||+|||+||+|++.++..++.....+.+
T Consensus 83 ~~a~~~~~~~~g~~~~~~~G~~a~v~VPG~v~g~~~a~~~~G~Lpw~~ll~PAI~lA~~Gf~Vs~~la~~~~~~~~~l~~ 162 (516)
T 2i3o_A 83 RAVSIDYYESMGLTKIPERGPYAAITVPGIAGSWDEIFRKFATMDIADILEPAIRTASAGFPITQNYSDSIARSAPVIGQ 162 (516)
T ss_dssp TTCCHHHHHTTTCSSCCSSSTTTCCBCCCHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHCEECCHHHHHHHHHHHHHHTT
T ss_pred ccCCHHHHhhcCCCcCCCCCCcccCcCchHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHhhc
Confidence 99999999754 3467799999 99999999999999999999999999999999999999999999999988888888
Q ss_pred CccchhhcccCCcccCCCCeeeCHHHHHHHHHHHHhCCCCccchHHHHHHHHHHHhcCCccCHHHhccCCceeecceEEe
Q 015378 224 DRGLQEVFAPNGKLLKPGDKCYNEKLAQSLEAVAEQGPQALYNGTVGEMLVKDVSKAGGILTMEDLRNYKVNVVDAVSVN 303 (408)
Q Consensus 224 ~~~~~~~f~p~G~~l~~Gd~l~~p~LA~TL~~IA~~G~~~FY~G~iA~~lv~~~~~~GG~lt~~DL~~Y~~~~~~pl~~~ 303 (408)
+|+++++|.|+|+++++||+++||+||+|||+||++|+++||+|+||++|+++++++||+||++||++|++++++||+++
T Consensus 163 ~~~~~~~f~~~G~~~~~G~~~~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DLa~y~~~~~~Pl~~~ 242 (516)
T 2i3o_A 163 YRGWSSIFMPNGSVPVAGEILKQPDLAESFRLMSEEGFRSFYDGSLADIIIAGLEGTGSPLSDRDLRVYRPLIGKPVFTD 242 (516)
T ss_dssp CHHHHHHHSTTSSCCCTTCEECCHHHHHHHHHHHHHCTTHHHHSHHHHHHHHTTTTTCCCCCHHHHHHCCCEEECCEEEE
T ss_pred ChhHHhhhccCCccCCCCCEecCHHHHHHHHHHHhhCcccccCCHHHHHHHHHHHHcCCCCCHHHHhhCCcceeCceEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCeeEecCCCCCChHHHHHHHHHHHhcCCCCCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCCCcchHHhhhCCHHHHH
Q 015378 304 VMGYTISGMPPPSCGTAGMAMVLNILDSYGSSDSAKGNLGLHRIIEALKHMFAARMNLGDPNFVNISSVLSEMLSLSFAK 383 (408)
Q Consensus 304 ~~g~~v~~~ppPssG~~~l~~~LniLe~~~~~~~~~~~~~~h~lvEa~k~a~a~R~~lGDP~f~~v~~~~~~lls~~~a~ 383 (408)
|+||+||++||||||.+ ++++|||||+|++....++++++|+++||+|+||++|.++|||+|++++ +++| +|++
T Consensus 243 yrg~~v~~~pPps~G~~-~l~~L~iLe~~~~~~~~~~~~~~H~~~EA~k~A~adR~~lgDp~f~~vp--~~~L---~y~~ 316 (516)
T 2i3o_A 243 LDEFRIYETSPNSQGIT-VIEWIRGMESHGYDSRTMWEAKIEDIFETMEEAYDKRRKITDPSYMNIA--QHDS---ANGK 316 (516)
T ss_dssp ETTEEEEECCTTBTTHH-HHHHHHHHHHTTCCTTTGGGCCHHHHHHHHHHHHHHHTTCCCGGGTC---------------
T ss_pred eCCeEEEECCCCcHHHH-HHHHHHhhhcCCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCccccccc--hHHH---HHHH
Confidence 99999999999999966 7799999999998655567899999999999999999999999999887 5677 8887
Q ss_pred H
Q 015378 384 Q 384 (408)
Q Consensus 384 ~ 384 (408)
+
T Consensus 317 ~ 317 (516)
T 2i3o_A 317 K 317 (516)
T ss_dssp -
T ss_pred h
Confidence 7
No 8
>1apy_A Aspartylglucosaminidase; glycosylasparaginase, hydrolase; HET: NAG BMA; 2.00A {Homo sapiens} SCOP: d.153.1.5 PDB: 1apz_A*
Probab=92.36 E-value=0.2 Score=44.69 Aligned_cols=43 Identities=23% Similarity=0.241 Sum_probs=33.1
Q ss_pred CChHHHHHHHHHHhcCCCHHHHHHHHHHHhhhcC-CCCCCCCCC
Q 015378 81 DDGRCSEIGASMLRQGGHAVDAAVATALCLGVVN-PMASGIGGG 123 (408)
Q Consensus 81 ~~~~as~aG~~vL~~GGNAvDAAIAaal~l~Vv~-P~~sGiGGg 123 (408)
.-..|.++|.++|++||+|.||.+++.-.+=--. -+.+|-||-
T Consensus 12 ~~~~a~~~g~~~L~~G~sAlDAV~~av~~lEd~p~~fNAG~Gs~ 55 (162)
T 1apy_A 12 PFKNATEAAWRALASGGSALDAVESGCAMCEREQCDGSVGFGGS 55 (162)
T ss_dssp SCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTGGGSSSSSSC
T ss_pred hHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCCcCcCCCCC
Confidence 4557999999999999999999998855543322 367887774
No 9
>1k2x_A Putative L-asparaginase; NTN hydrolase, asparginase, autoproteolysis, hydrolase; HET: CME; 1.65A {Escherichia coli} SCOP: d.153.1.5 PDB: 1jn9_A* 1t3m_A 2zal_A
Probab=88.70 E-value=0.54 Score=42.47 Aligned_cols=41 Identities=27% Similarity=0.345 Sum_probs=31.9
Q ss_pred hHHHHHHHHHHhcCCCHHHHHHHHHHHhhhcCCCCCCCCCC
Q 015378 83 GRCSEIGASMLRQGGHAVDAAVATALCLGVVNPMASGIGGG 123 (408)
Q Consensus 83 ~~as~aG~~vL~~GGNAvDAAIAaal~l~Vv~P~~sGiGGg 123 (408)
..|.++|.++|++||+|.||.+++.-++=--.=+.+|-|+-
T Consensus 32 ~~a~~~~~~~L~~g~saldAV~~av~~lEd~p~fNaG~Gs~ 72 (177)
T 1k2x_A 32 SAIVETGQKMLEAGESALDVVTEAVRLLEECPLFNAGIGAV 72 (177)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSSSSTTCC
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCCcCCcC
Confidence 45678999999999999999999877765544456666653
No 10
>1p4k_A N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase; alpha beta, beta alpha, sandwich, hydrolase; 1.90A {Elizabethkingia meningoseptica} SCOP: d.153.1.5 PDB: 1p4v_A 9gaa_A 9gaf_A 9gac_A 3ljq_A 2gl9_A* 1ayy_A 2gaw_A 2gac_A* 2gaw_B 1ayy_B 2gl9_B* 2gac_B*
Probab=88.14 E-value=0.75 Score=44.72 Aligned_cols=46 Identities=26% Similarity=0.400 Sum_probs=35.6
Q ss_pred EEEc-CCh-HHHHHHHHHHhcCCCHHHHHHHHHHHhhhcCC--CCCCCCCC
Q 015378 77 VVAA-DDG-RCSEIGASMLRQGGHAVDAAVATALCLGVVNP--MASGIGGG 123 (408)
Q Consensus 77 aVaa-~~~-~as~aG~~vL~~GGNAvDAAIAaal~l~Vv~P--~~sGiGGg 123 (408)
+|+| +.. .|.++|.++|++||+|.||.+++.-++= -.| +.+|-|+-
T Consensus 7 vi~tw~~~~~a~~~~~~~L~~ggsaldAV~~av~~lE-d~p~~fnaG~Gs~ 56 (295)
T 1p4k_A 7 VLSTWNFGLHANVEAWKVLSKGGKALDAVEKGVRLVE-DDPTERSVGYGGR 56 (295)
T ss_dssp EEEESTTHHHHHHHHHHHHTTTCCHHHHHHHHHHHHH-HCTTCTTSSTTCC
T ss_pred EEEccccHHHHHHHHHHHHHcCCCHHHHHHHHHHHHh-hCCCccCcccCCC
Confidence 3455 555 7899999999999999999999866664 445 67777764
No 11
>2gez_A L-asparaginase alpha subunit; isoaspartyl aminopeptidase, NTN-hydrolase, autoproteolysis, taspase, sodium binding, hydrolase; 2.60A {Lupinus luteus}
Probab=87.87 E-value=0.64 Score=42.63 Aligned_cols=41 Identities=22% Similarity=0.356 Sum_probs=31.8
Q ss_pred hHHHHHHHHHHhcCCCHHHHHHHHHHHhhhcCCCCCCCCCC
Q 015378 83 GRCSEIGASMLRQGGHAVDAAVATALCLGVVNPMASGIGGG 123 (408)
Q Consensus 83 ~~as~aG~~vL~~GGNAvDAAIAaal~l~Vv~P~~sGiGGg 123 (408)
..|.++|.++|++||+|.||.+++.-++=--.=+.+|-|+-
T Consensus 35 ~~a~~~g~~~L~~G~sAlDAV~~av~~lEd~p~fNaG~Gs~ 75 (195)
T 2gez_A 35 RHCLQIGVEALKAQKPPLDVVELVVRELENIEHFNAGIGSV 75 (195)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSSSSTTCC
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCCcCCcC
Confidence 35678899999999999999999877765444456666653
No 12
>4gdv_A L-asparaginase; NTN enzyme, homodimer, hydrolase, L-asparagine; 1.75A {Homo sapiens} PDB: 4gdu_A 4gdt_A 4gdw_A
Probab=87.08 E-value=0.67 Score=45.40 Aligned_cols=41 Identities=32% Similarity=0.480 Sum_probs=31.8
Q ss_pred hHHHHHHHHHHhcCCCHHHHHHHHHHHhhhcCCCCCCCCCC
Q 015378 83 GRCSEIGASMLRQGGHAVDAAVATALCLGVVNPMASGIGGG 123 (408)
Q Consensus 83 ~~as~aG~~vL~~GGNAvDAAIAaal~l~Vv~P~~sGiGGg 123 (408)
..|.++|.++|++||+|.||.+++.-++=--.=+.+|.|+-
T Consensus 30 ~~a~~~g~~~L~~ggsalDAV~~av~~lEd~p~fNaG~Gs~ 70 (310)
T 4gdv_A 30 VRAATVGYGILREGGSAVDAVEGAVVALEDDPEFNAGCGSV 70 (310)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHHHHSTTSSSSTTCC
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHcCCCCCCccCcC
Confidence 35788999999999999999998877776433345777653
No 13
>3c17_A L-asparaginase precursor; isoaspartyl peptidase, NTN-hydrolase, autoprot precursor, hydrolase; 1.95A {Escherichia coli} PDB: 2zak_A
Probab=79.65 E-value=2.1 Score=42.08 Aligned_cols=41 Identities=27% Similarity=0.345 Sum_probs=32.4
Q ss_pred hHHHHHHHHHHhcCCCHHHHHHHHHHHhhhcCCCCCCCCCC
Q 015378 83 GRCSEIGASMLRQGGHAVDAAVATALCLGVVNPMASGIGGG 123 (408)
Q Consensus 83 ~~as~aG~~vL~~GGNAvDAAIAaal~l~Vv~P~~sGiGGg 123 (408)
..|.++|.++|++||+|.||.+++.-++=--.=+.+|-|+-
T Consensus 32 ~~a~~~~~~~L~~ggsalDAV~~av~~lEd~p~fNaG~Gs~ 72 (320)
T 3c17_A 32 SAIVETGQKMLEAGESALDVVTEAVRLLEECPLFNAGIGAV 72 (320)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHSTTSSSSTTCC
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHhhhhhcCCCCCCccCCC
Confidence 46788999999999999999999977765444456777664
No 14
>2a8j_A Taspase 1, threonine aspartase 1; MLL, glycosylspraginase, asparaginase, hydrolase; 1.90A {Homo sapiens} PDB: 2a8i_A 2a8m_A 2a8l_A
Probab=76.27 E-value=2.8 Score=42.61 Aligned_cols=39 Identities=28% Similarity=0.444 Sum_probs=30.0
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHhhhcCCC-CCCCCCC
Q 015378 84 RCSEIGASMLRQGGHAVDAAVATALCLGVVNPM-ASGIGGG 123 (408)
Q Consensus 84 ~as~aG~~vL~~GGNAvDAAIAaal~l~Vv~P~-~sGiGGg 123 (408)
.|.++|.++|++||+|.||.+++.-.+=- .|. .+|.|+-
T Consensus 67 ~A~~~a~~~L~~GgsAlDAV~~av~~lEd-~p~fNaG~Gs~ 106 (420)
T 2a8j_A 67 RACQKAIEKLQAGALATDAVTAALVELED-SPFTNAGMGSN 106 (420)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHH-STTSSSSTTCC
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHhc-CCCCCccCCcC
Confidence 35678999999999999999998666554 454 6777664
No 15
>1u5t_A Appears to BE functionally related to SNF7; SNF8P; ESCRT, endosomal, trafficking, protein complex, transport protein; 3.60A {Saccharomyces cerevisiae} SCOP: a.4.5.54 a.4.5.54 PDB: 1w7p_A
Probab=57.47 E-value=7.9 Score=36.26 Aligned_cols=33 Identities=15% Similarity=0.364 Sum_probs=25.2
Q ss_pred CCCccchHHHHHHHHHHH----hcCCccCHHHhccCCc
Q 015378 261 PQALYNGTVGEMLVKDVS----KAGGILTMEDLRNYKV 294 (408)
Q Consensus 261 ~~~FY~G~iA~~lv~~~~----~~GG~lt~~DL~~Y~~ 294 (408)
...||. ++|.+|++-+. .+||+|+++|+...--
T Consensus 88 ~gdfy~-eLavqIvEvC~~tr~~nGGli~l~el~~~~~ 124 (233)
T 1u5t_A 88 VNDFYY-EVCLKVIEICRQTKDMNGGVISFQELEKVHF 124 (233)
T ss_dssp HHHHHH-HHHHHHHHHHHHHTTTSSSCEEHHHHHHTTT
T ss_pred cchHHH-HHHHHHHHHHHHHHHhcCCeeEHHHHHHHHH
Confidence 346887 78888887664 5899999999986553
No 16
>3cuq_A Vacuolar-sorting protein SNF8; ESCRT, MBV, VPS, nucleus, protein transport, transc transcription regulation, transport, endosome; 2.61A {Homo sapiens} PDB: 2zme_A
Probab=54.73 E-value=4.5 Score=37.97 Aligned_cols=72 Identities=22% Similarity=0.408 Sum_probs=43.0
Q ss_pred cHHHHHHhhhhhcCCccchhhccc----CC-cccCCCCeeeCHH-HHHHHHHHHHhCCCCccchHHHHHHHHHH----Hh
Q 015378 210 LGRHIAKSGGRILNDRGLQEVFAP----NG-KLLKPGDKCYNEK-LAQSLEAVAEQGPQALYNGTVGEMLVKDV----SK 279 (408)
Q Consensus 210 l~~~l~~~~~~i~~~~~~~~~f~p----~G-~~l~~Gd~l~~p~-LA~TL~~IA~~G~~~FY~G~iA~~lv~~~----~~ 279 (408)
|.....++...|.++|.+|.-|.. =| .|+.-+ +. -+++| |...||. ++|.+|++-+ ..
T Consensus 23 L~~FA~kH~~eI~~dp~fR~~F~~mc~siGVDPlas~-----kg~ws~~l------G~gdfy~-eLavqIvEvC~~tr~~ 90 (234)
T 3cuq_A 23 LEEFASKHKQEIRKNPEFRVQFQDMCATIGVDPLASG-----KGFWSEML------GVGDFYY-ELGVQIIEVCLALKHR 90 (234)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCCTTSCT-----TSHHHHHH------CHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcccccccCHHHHHHHHHHHHHcCCCcccCC-----cchhhhhc------CcchHHH-HHHHHHHHHHHHHHHh
Confidence 344445566778888888777731 12 243322 11 12222 3346887 6777777754 56
Q ss_pred cCCccCHHHhccCC
Q 015378 280 AGGILTMEDLRNYK 293 (408)
Q Consensus 280 ~GG~lt~~DL~~Y~ 293 (408)
+||+|+++|+...-
T Consensus 91 nGGli~L~el~~~~ 104 (234)
T 3cuq_A 91 NGGLITLEELHQQV 104 (234)
T ss_dssp HSSEEEHHHHHHHH
T ss_pred cCCeeEHHHHHHHH
Confidence 89999999987543
No 17
>1u5t_B Defective in vacuolar protein sorting; VPS36P; ESCRT, endosomal, trafficking, protein complex, transport protein; 3.60A {Saccharomyces cerevisiae} SCOP: a.4.5.54 a.4.5.54
Probab=32.43 E-value=14 Score=32.73 Aligned_cols=26 Identities=19% Similarity=0.254 Sum_probs=17.2
Q ss_pred ccchHHHHHHHHHHH---h-----cCC-ccCHHHhc
Q 015378 264 LYNGTVGEMLVKDVS---K-----AGG-ILTMEDLR 290 (408)
Q Consensus 264 FY~G~iA~~lv~~~~---~-----~GG-~lt~~DL~ 290 (408)
||. ++|.+|++.+. + +|| +|++.||-
T Consensus 12 f~~-ELa~qi~e~c~~~~~~~~~~~GG~~I~L~dl~ 46 (169)
T 1u5t_B 12 FLD-EIAREIYEFTLSEFKDLNSDTNYMIITLVDLY 46 (169)
T ss_dssp HHH-HHHHHHHHHHHTTTTTSSSCCCCCCEETTHHH
T ss_pred HHH-HHHHHHHHHHhhcchhhHHhcCceeEEHHHHH
Confidence 454 78888888877 4 577 55555543
No 18
>3cuq_B Vacuolar protein-sorting-associated protein 36; ESCRT, MBV, VPS, nucleus, protein transport, transc transcription regulation, transport, endosome; 2.61A {Homo sapiens} PDB: 2zme_B
Probab=31.64 E-value=17 Score=33.41 Aligned_cols=29 Identities=14% Similarity=0.287 Sum_probs=21.4
Q ss_pred CCccchHHHHHHHHHH----HhcCCccCHHHhcc
Q 015378 262 QALYNGTVGEMLVKDV----SKAGGILTMEDLRN 291 (408)
Q Consensus 262 ~~FY~G~iA~~lv~~~----~~~GG~lt~~DL~~ 291 (408)
..||. ++|.+|++.+ .++||+|++.||..
T Consensus 71 ~~f~~-ELa~qi~e~c~~~~~~~GG~I~L~dl~~ 103 (218)
T 3cuq_B 71 TQYHM-QLAKQLAGILQVPLEERGGIMSLTEVYC 103 (218)
T ss_dssp CHHHH-HHHHHHHHHHHHHHHHTTSEEEHHHHHH
T ss_pred cHHHH-HHHHHHHHHHHHHHHhCCCeEEHHHHHH
Confidence 34666 7888888765 46899988888763
No 19
>2xvc_A ESCRT-III, SSO0910; cell cycle, cell division, cytokinesis, winged-helix; 2.15A {Sulfolobus solfataricus}
Probab=28.92 E-value=23 Score=26.16 Aligned_cols=24 Identities=29% Similarity=0.583 Sum_probs=20.2
Q ss_pred HHHHHHHHhcCCccCHHHhcc-CCc
Q 015378 271 EMLVKDVSKAGGILTMEDLRN-YKV 294 (408)
Q Consensus 271 ~~lv~~~~~~GG~lt~~DL~~-Y~~ 294 (408)
++|.+.++++||+|..+++++ |.+
T Consensus 13 ~~lL~yIr~sGGildI~~~a~kygV 37 (59)
T 2xvc_A 13 RELLDYIVNNGGFLDIEHFSKVYGV 37 (59)
T ss_dssp HHHHHHHHHTTSEEEHHHHHHHHCC
T ss_pred HHHHHHHHHcCCEEeHHHHHHHhCC
Confidence 578999999999999999984 443
No 20
>3gxq_A Putative regulator of transfer genes ARTA; ribbon-helix-helix, plasmid, DNA binding protein/DNA complex; HET: DNA; 2.35A {Staphylococcus aureus subsp}
Probab=25.78 E-value=24 Score=24.64 Aligned_cols=15 Identities=27% Similarity=0.501 Sum_probs=12.2
Q ss_pred ChHHHHHHHHHHhcC
Q 015378 82 DGRCSEIGASMLRQG 96 (408)
Q Consensus 82 ~~~as~aG~~vL~~G 96 (408)
-.-.|++|++||++|
T Consensus 35 fdnvsqagreilkkg 49 (54)
T 3gxq_A 35 FDNVSQAGREILKKG 49 (54)
T ss_dssp TTCHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHH
Confidence 344689999999987
No 21
>1x58_A Hypothetical protein 4930532D21RIK; MUS musculus adult MALE testis cDNA, riken FULL-length enriched library, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.4.1.1
Probab=24.41 E-value=49 Score=24.65 Aligned_cols=24 Identities=17% Similarity=0.336 Sum_probs=20.8
Q ss_pred cccHHHHHHHHHHhcCCCChHHhHH
Q 015378 170 VPGEIAGLHEAWLKHGRLAWRTLFQ 194 (408)
Q Consensus 170 VPG~vaGl~~a~~~~G~L~w~~L~~ 194 (408)
.+=+..-|.+.+++||. .|++|+.
T Consensus 12 T~EE~~~L~~gV~k~G~-~W~~I~~ 35 (62)
T 1x58_A 12 TKEEVNYLFHGVKTMGN-HWNSILW 35 (62)
T ss_dssp CHHHHHHHHHHHHHHCS-CHHHHHH
T ss_pred CHHHHHHHHHHHHHHhH-hHHHHHH
Confidence 45688899999999999 9999963
Done!