Your job contains 1 sequence.
>015383
MGILALYVALFTVLTAVSDGRRSEYREDGISVDIRLPVKHVLSKELQLYFDKIRELTVSR
SNSTVFKQALLSLAMDSGLHPLVPYFTYFISEEVTRSLKNFSLLFALMRVARSLLRNPHI
HIEPYLHQMMPSVITCLVSKRLGNRFSDNHWDLRNFVADLIASICTRFGHVYQNLQSRVT
RTLLHAFLDPTKSLSQHYGAIQGLAALGPSVVHLLILPNLELYLKFLEPEMLLEKQKNEM
KRHEAWRVYGALQCAAGLCVYDRLKTVLLRPPKQSRWESNRKGMIVFPSKRKASMDNLML
QPPVKKMATLGPMGVMPVNSMAVNMQGPSGGFSTPVEGPRAGVSMLRHLQNEKMLRREVS
NQALKTSTVLAQAWKEDAEGGHLLASLYELFGESMFSFTRKSELYFFL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 015383
(408 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2010667 - symbol:TAFII59 "TATA BOX ASSOCIATED ... 1005 2.3e-101 1
DICTYBASE|DDB_G0288471 - symbol:taf6 "TATA-binding protei... 532 9.9e-54 2
POMBASE|SPCC16C4.18c - symbol:taf6 "histone H4-like TAF T... 514 2.5e-49 1
ASPGD|ASPL0000017134 - symbol:AN8232 species:162425 "Emer... 401 2.4e-37 1
CGD|CAL0005584 - symbol:TAF60 species:5476 "Candida albic... 379 5.1e-35 1
UNIPROTKB|Q5A2V7 - symbol:TAF6 "Putative uncharacterized ... 379 5.1e-35 1
FB|FBgn0010417 - symbol:Taf6 "TBP-associated factor 6" sp... 378 1.8e-34 1
UNIPROTKB|Q91857 - symbol:taf6 "Transcription initiation ... 377 2.6e-34 1
UNIPROTKB|G8JLM6 - symbol:TAF6 "Transcription initiation ... 372 8.1e-34 1
UNIPROTKB|Q58DG7 - symbol:TAF6 "TBP-associated factor 6 i... 374 8.8e-34 1
UNIPROTKB|J9NS44 - symbol:TAF6 "Uncharacterized protein" ... 374 8.8e-34 1
MGI|MGI:109129 - symbol:Taf6 "TAF6 RNA polymerase II, TAT... 374 8.8e-34 1
RGD|1311608 - symbol:Taf6 "TAF6 RNA polymerase II, TATA b... 374 8.8e-34 1
UNIPROTKB|E2RFB9 - symbol:TAF6 "Uncharacterized protein" ... 374 9.9e-34 1
UNIPROTKB|P49848 - symbol:TAF6 "Transcription initiation ... 372 1.4e-33 1
UNIPROTKB|J3KR72 - symbol:TAF6 "Transcription initiation ... 372 1.9e-33 1
ZFIN|ZDB-GENE-040912-23 - symbol:taf6 "TAF6 RNA polymeras... 369 2.4e-33 1
SGD|S000003080 - symbol:TAF6 "Subunit (60 kDa) of TFIID a... 359 6.7e-33 1
MGI|MGI:2444957 - symbol:Taf6l "TAF6-like RNA polymerase ... 271 4.2e-21 1
UNIPROTKB|F1MDZ8 - symbol:TAF6L "Uncharacterized protein"... 266 2.1e-20 1
UNIPROTKB|E2QUN8 - symbol:TAF6L "Uncharacterized protein"... 264 3.1e-20 1
UNIPROTKB|I3LPI1 - symbol:TAF6L "Uncharacterized protein"... 263 4.1e-20 1
UNIPROTKB|Q9Y6J9 - symbol:TAF6L "TAF6-like RNA polymerase... 254 4.7e-19 1
ZFIN|ZDB-GENE-030131-6789 - symbol:taf6l "TAF6-like RNA p... 251 1.1e-18 1
FB|FBgn0014342 - symbol:mia "meiosis I arrest" species:72... 231 4.8e-16 2
RGD|1310123 - symbol:Taf6l "TAF6-like RNA polymerase II, ... 218 5.8e-15 1
WB|WBGene00006387 - symbol:taf-6.1 species:6239 "Caenorha... 152 9.1e-08 1
WB|WBGene00021363 - symbol:taf-6.2 species:6239 "Caenorha... 130 1.6e-06 2
>TAIR|locus:2010667 [details] [associations]
symbol:TAFII59 "TATA BOX ASSOCIATED FACTOR II 59"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA;ISS] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0009860
"pollen tube growth" evidence=IMP] [GO:0000394 "RNA splicing, via
endonucleolytic cleavage and ligation" evidence=RCA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=RCA]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] InterPro:IPR004823
InterPro:IPR009072 InterPro:IPR011442 InterPro:IPR016024
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 EMBL:CP002684 GO:GO:0005634
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0006352
GO:GO:0009860 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0003743
EMBL:AC004809 GO:GO:0051090 KO:K03131 HSSP:P49847 OMA:LEMIYSL
UniGene:At.46000 EMBL:AY050962 EMBL:AY091292 EMBL:AY463621
IPI:IPI00521178 PIR:A86183 RefSeq:NP_001030969.1 RefSeq:NP_171987.1
RefSeq:NP_849592.1 UniGene:At.47479 ProteinModelPortal:Q9MAU3
SMR:Q9MAU3 IntAct:Q9MAU3 STRING:Q9MAU3 PRIDE:Q9MAU3
EnsemblPlants:AT1G04950.1 EnsemblPlants:AT1G04950.2
EnsemblPlants:AT1G04950.3 GeneID:839370 KEGG:ath:AT1G04950
TAIR:At1g04950 InParanoid:Q9MAU3 PhylomeDB:Q9MAU3
ProtClustDB:CLSN2681958 ArrayExpress:Q9MAU3 Genevestigator:Q9MAU3
Uniprot:Q9MAU3
Length = 549
Score = 1005 (358.8 bits), Expect = 2.3e-101, P = 2.3e-101
Identities = 213/411 (51%), Positives = 282/411 (68%)
Query: 13 VLTAVSDGRRSEYREDGISVDIRLPVKHVLSKELQLYFDKIRELTVSRSNSTVFKQALLS 72
V+ A ++ + E ++DG +D+RLPVKHVLS+ELQLYF KI EL +S+SN ++K+AL+S
Sbjct: 142 VIRAPAETKIHE-QKDGPLIDVRLPVKHVLSRELQLYFQKIAELAMSKSNPPLYKEALVS 200
Query: 73 LAMDSGLHPLVPYFTYFISEEVTRSLKNFSLLFALMRVARSLLRNPHIHIEPYLHQMMPS 132
LA DSGLHPLVPYFT FI++EV+ L +F LLF LM + RSLL+NPHIHIEPYLHQ+MPS
Sbjct: 201 LASDSGLHPLVPYFTNFIADEVSNGLNDFRLLFNLMHIVRSLLQNPHIHIEPYLHQLMPS 260
Query: 133 VITCLVSKRLGNRFSDNHWDLRNFVADLIASICTRFGHVYQNLQSRVTRTLLHAFLDPTK 192
V+TCLVS++LGNRF+DNHW+LR+F A+L++ IC R+G VY LQSR+TRTL++A LDP K
Sbjct: 261 VVTCLVSRKLGNRFADNHWELRDFAANLVSLICKRYGTVYITLQSRLTRTLVNALLDPKK 320
Query: 193 SLSQHYGAIQGLAALGPSVVHLLILPNLELYLKFLEPEMLLEKQKNEMKRHEAWRVYGAL 252
+L+QHYGAIQGLAALG +VV LLIL NLE YL LEPE+ EKQKN+MK +EAWRVYGAL
Sbjct: 321 ALTQHYGAIQGLAALGHTVVRLLILSNLEPYLSLLEPELNAEKQKNQMKIYEAWRVYGAL 380
Query: 253 QCAAGLCVYDRLKTVLLRP-PKQSRWESNR-KGMIVF--PSKRKASMDNLMLQPPVKKMA 308
AAGLC++ RLK P P S + KG I+ P KRK S+D+ Q P K++
Sbjct: 381 LRAAGLCIHGRLKIFPPLPSPSPSFLHKGKGKGKIISTDPHKRKLSVDSSENQSPQKRLI 440
Query: 309 TL-GPMGV----------MPVNSMAVNMQGPSGGFSTPVEGPRAGVSMLRHLQNEKMLRR 357
T+ GP GV M V++ N P P +A + +N K+ +
Sbjct: 441 TMDGPDGVHSQDQSGSAPMQVDNPVENDNPPQNSVQ-PSSSEQASDANESESRNGKV-KE 498
Query: 358 EVSNQALKTSTVLAQAWKEDAEGGHLLASLYELFGESMFSFTRKSELYFFL 408
++A+ +L Q WK+D + G LL L+EL+G+ + F +E+ FL
Sbjct: 499 SGRSRAITMKAILDQIWKDDLDSGRLLVKLHELYGDRILPFIPSTEMSVFL 549
>DICTYBASE|DDB_G0288471 [details] [associations]
symbol:taf6 "TATA-binding protein-associated-factor"
species:44689 "Dictyostelium discoideum" [GO:0051090 "regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=ISS]
[GO:0005669 "transcription factor TFIID complex" evidence=ISS]
[GO:0000124 "SAGA complex" evidence=ISS] InterPro:IPR004823
InterPro:IPR009072 InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571
SMART:SM00803 dictyBase:DDB_G0288471 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016568 GenomeReviews:CM000154_GR
Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:AAFI02000111 GO:GO:0000124
GO:GO:0006367 GO:GO:0051090 GO:GO:0005669 eggNOG:COG5095 KO:K03131
OMA:EPLYGYD RefSeq:XP_636709.1 ProteinModelPortal:Q54IW7
STRING:Q54IW7 EnsemblProtists:DDB0231094 GeneID:8626641
KEGG:ddi:DDB_G0288471 InParanoid:Q54IW7 ProtClustDB:CLSZ2730274
Uniprot:Q54IW7
Length = 542
Score = 532 (192.3 bits), Expect = 9.9e-54, Sum P(2) = 9.9e-54
Identities = 108/227 (47%), Positives = 152/227 (66%)
Query: 31 SVDIRLPVKHVLSKELQLYFDKIRELTVSRSNSTVFKQALLSLAMDSGLHPLVPYFTYFI 90
S ++ VKHVLSKE+Q++++KI +V N +F AL SL DS LH L+PYF FI
Sbjct: 240 STIVKPTVKHVLSKEIQMFYEKITN-SVKSDNQKLFDAALHSLKSDSSLHQLLPYFINFI 298
Query: 91 SEEVTRSLKNFSLLFALMRVARSLLRNPHIHIEPYLHQMMPSVITCLVSKRLGNRFSDNH 150
S +VT++L N LL LM++A+++L + H+ E YLHQ+MPS++TCLV K+L N S+NH
Sbjct: 299 SVQVTQNLTNLELLNRLMKMAQAILESKHLKPELYLHQLMPSILTCLVGKKLCNSPSENH 358
Query: 151 WDLRNFVADLIASICTRFGHVYQNLQSRVTRTLLHAFLDPTKSLSQHYGAIQGLAALGPS 210
W+LR+F A L++ +C +FG VY +LQ R+T+TL+ D TK L+ HYGAI GL+ LG +
Sbjct: 359 WELRDFAARLVSFVCRKFGDVYSSLQGRITKTLVQTLHDTTKPLTTHYGAIVGLSGLGRN 418
Query: 211 VVHLLILPNLELYLKFLEPEMLLEKQKNEMKRHEAWRVYGALQCAAG 257
V+ L+LP + Y K LEPE L N +K EA RV ++ A G
Sbjct: 419 VIQFLLLPYVPKYYKLLEPE-LNNNLSNPIKSMEANRVLNSIIDATG 464
Score = 41 (19.5 bits), Expect = 9.9e-54, Sum P(2) = 9.9e-54
Identities = 6/15 (40%), Positives = 12/15 (80%)
Query: 386 SLYELFGESMFSFTR 400
SL++LFGE + ++ +
Sbjct: 516 SLFDLFGEKLLAYIK 530
>POMBASE|SPCC16C4.18c [details] [associations]
symbol:taf6 "histone H4-like TAF Taf6, SAGA complex
subunit" species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA
complex" evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005669 "transcription factor TFIID complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=IC] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=ISO]
[GO:0016573 "histone acetylation" evidence=IC] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0051090 "regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 InterPro:IPR016024 Pfam:PF02969 Pfam:PF07571
SMART:SM00803 PomBase:SPCC16C4.18c GO:GO:0005829 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0016573 GO:GO:0006338 GO:GO:0000790
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0000124 GO:GO:0006367
GO:GO:0051090 GO:GO:0005669 eggNOG:COG5095 KO:K03131 PIR:T41108
RefSeq:NP_587928.1 HSSP:P49847 ProteinModelPortal:O74462
STRING:O74462 EnsemblFungi:SPCC16C4.18c.1 GeneID:2539133
KEGG:spo:SPCC16C4.18c HOGENOM:HOG000159894 OMA:EPLYGYD
OrthoDB:EOG45XC4M NextBio:20800305 Uniprot:O74462
Length = 452
Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 119/287 (41%), Positives = 173/287 (60%)
Query: 15 TAVSDGRRSEYREDGISVDIRLPVKHVLSKELQLYFDKIRELTVSRSNSTVFKQALLSLA 74
TA + R D +V+I+ V+HVLSKELQLYF++I + +N + AL SL
Sbjct: 167 TAAKEARNGVTSMD--NVEIKPLVRHVLSKELQLYFERITSALLDETNVELRDAALSSLR 224
Query: 75 MDSGLHPLVPYFTYFISEEVTRSLKNFSLLFALMRVARSLLRNPHIHIEPYLHQMMPSVI 134
D GLH L+PYF F+S+ VTR+L N +L LM +A +LL NP++ +EPY+ Q+MPS++
Sbjct: 225 DDPGLHQLLPYFIMFLSDSVTRNLGNLVVLTTLMHMAWALLDNPNLFVEPYVQQLMPSIL 284
Query: 135 TCLVSKRLGNRFSDN-HWDLRNFVADLIASICTRFGHVYQNLQSRVTRTLLHAFLDPTKS 193
TCLV+KRLG+ +++ H+ LR+ A L+ +C RFG+VY L+ RVTRT L AFLD TK
Sbjct: 285 TCLVAKRLGSDPNNHEHYALRDLAAFLLGIVCDRFGNVYYTLKPRVTRTALKAFLDNTKP 344
Query: 194 LSQHYGAIQGLAALGPSVVHLLILPNLELYLKFLEPEMLLEKQKNEMKRHEAWRVYGALQ 253
S HYGAI+GL +G + +L++PN+++Y + LEK NE + +EA + AL
Sbjct: 345 YSTHYGAIKGLKTMGKEAIRVLVVPNIKVYEVLVRKT--LEKG-NEEEIYEANKCMDALY 401
Query: 254 CAAGLCVYDRLKTVLLRPPKQSRWESNRKGMIVFPSKRKASMDNLML 300
A L D+L PP S G ++ K + +L+L
Sbjct: 402 DALLLLRDDQLPNQRTLPPNASGLLEKNVGSLMAEKIMKENDTSLLL 448
>ASPGD|ASPL0000017134 [details] [associations]
symbol:AN8232 species:162425 "Emericella nidulans"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0051090 "regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000124 "SAGA complex" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
GO:GO:0005634 GO:GO:0006352 EMBL:BN001302 Gene3D:1.10.20.10
SUPFAM:SSF47113 GO:GO:0003743 GO:GO:0051090 EMBL:AACD01000144
eggNOG:COG5095 KO:K03131 HOGENOM:HOG000159894 OMA:EPLYGYD
OrthoDB:EOG45XC4M RefSeq:XP_681501.1 ProteinModelPortal:Q5ATZ8
STRING:Q5ATZ8 EnsemblFungi:CADANIAT00004284 GeneID:2869223
KEGG:ani:AN8232.2 Uniprot:Q5ATZ8
Length = 445
Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 87/224 (38%), Positives = 132/224 (58%)
Query: 31 SVDIRLPVKHVLSKELQLYFDKIRELTVSRSNSTVFKQALLSLAMDSGLHPLVPYFTYFI 90
+V ++ VKHVLSKELQLYF+K+ + S+ SL D GLH LVPYF FI
Sbjct: 169 NVAVKPLVKHVLSKELQLYFEKVCNAFLDESSEKYRTSGYASLREDPGLHQLVPYFVQFI 228
Query: 91 SEEVTRSLKNFSLLFALMRVARSLLRNPHIHIEPYLHQMMPSVITCLVSKRLGNRFS-DN 149
SE+VT LK+ +L +M +A +L++N ++++PY+ ++P ++TCL+ ++LG
Sbjct: 229 SEKVTHGLKDIFVLTQVMHMAEALVQNKSLYVDPYIASLVPPILTCLIGRQLGGTADLSE 288
Query: 150 HWDLRNFVADLIASICTRFGHVYQNLQSRVTRTLLHAFLDPTKSLSQHYGAIQGLAALGP 209
+ LR+ A L+ I T++ H L+ R+ R+ L LDP+K HYGAI GL A+G
Sbjct: 289 QFALRDLAAALLGLIATKYSHSSHTLKPRLARSCLKTLLDPSKPFGAHYGAIIGLHAVGG 348
Query: 210 S-VVHLLILPNLELYLKFLEPEMLLEKQKNEMKRHEAWRVYGAL 252
S V +LI+PNL +Y L+ + + +R EA +V G L
Sbjct: 349 SEAVRVLIIPNLPIYGNLLKDGLA----DDSARRPEAEKVLGLL 388
>CGD|CAL0005584 [details] [associations]
symbol:TAF60 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0000124 "SAGA
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0016573
"histone acetylation" evidence=IEA] [GO:0051123 "RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0032947 "protein complex scaffold" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001102 "RNA polymerase II
activating transcription factor binding" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 InterPro:IPR011442
InterPro:IPR016024 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
CGD:CAL0005584 GO:GO:0005634 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0035690 EMBL:AACQ01000074 GO:GO:0051090 eggNOG:COG5095
KO:K03131 HOGENOM:HOG000159894 RefSeq:XP_716115.1
ProteinModelPortal:Q5A2V7 STRING:Q5A2V7 GeneID:3642252
KEGG:cal:CaO19.7454 Uniprot:Q5A2V7
Length = 519
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 84/226 (37%), Positives = 133/226 (58%)
Query: 32 VDIRLPVKHVLSKELQLYFDKIRELTVSRS--NSTVFKQALLSLAMDSGLHPLVPYFTYF 89
++I+ +KHVLSKEL+LYFDK+ ++ +S + AL SL D GLH LVPYF F
Sbjct: 219 MEIKPLIKHVLSKELKLYFDKVVDVLISTDPEKEHLKNAALTSLKSDPGLHQLVPYFIQF 278
Query: 90 ISEEVTRSLKNFSLLFALMRVARSLLRNPHIHIEPYLHQMMPSVITCLVSKRLG-----N 144
I+E++T L+N +L ++ V +L+ N I ++PY+H +MP ++T L++KR+G
Sbjct: 279 IAEQITNQLRNIEILSTMLEVISALVDNKTIFLDPYVHALMPCILTLLLAKRIGPVIKLT 338
Query: 145 RFSDNHWD--------LRNFVADLIASICTRFGHVYQNLQSRVTRTLLHAFLDPTKSLSQ 196
+ + W +R F A L+ I +G Y L+ R+TRTLL A LD TK +
Sbjct: 339 QENKEEWQDALKSQLAIREFAAILLQHIIKVYGSSYSTLRPRITRTLLRALLDSTKPVGT 398
Query: 197 HYGAIQGLAALGPSVVHLLILPNLELYLKFLEPEMLLEKQKNEMKR 242
YGA+ GL +G V+ L++L NL+++ ++EK +N+ +R
Sbjct: 399 QYGALLGLKNMGNEVLKLVLLGNLKVWYS-----AIIEKNENDYER 439
>UNIPROTKB|Q5A2V7 [details] [associations]
symbol:TAF6 "Putative uncharacterized protein TAF6"
species:237561 "Candida albicans SC5314" [GO:0035690 "cellular
response to drug" evidence=IMP] InterPro:IPR004823
InterPro:IPR009072 InterPro:IPR011442 InterPro:IPR016024
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 CGD:CAL0005584
GO:GO:0005634 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0035690
EMBL:AACQ01000074 GO:GO:0051090 eggNOG:COG5095 KO:K03131
HOGENOM:HOG000159894 RefSeq:XP_716115.1 ProteinModelPortal:Q5A2V7
STRING:Q5A2V7 GeneID:3642252 KEGG:cal:CaO19.7454 Uniprot:Q5A2V7
Length = 519
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 84/226 (37%), Positives = 133/226 (58%)
Query: 32 VDIRLPVKHVLSKELQLYFDKIRELTVSRS--NSTVFKQALLSLAMDSGLHPLVPYFTYF 89
++I+ +KHVLSKEL+LYFDK+ ++ +S + AL SL D GLH LVPYF F
Sbjct: 219 MEIKPLIKHVLSKELKLYFDKVVDVLISTDPEKEHLKNAALTSLKSDPGLHQLVPYFIQF 278
Query: 90 ISEEVTRSLKNFSLLFALMRVARSLLRNPHIHIEPYLHQMMPSVITCLVSKRLG-----N 144
I+E++T L+N +L ++ V +L+ N I ++PY+H +MP ++T L++KR+G
Sbjct: 279 IAEQITNQLRNIEILSTMLEVISALVDNKTIFLDPYVHALMPCILTLLLAKRIGPVIKLT 338
Query: 145 RFSDNHWD--------LRNFVADLIASICTRFGHVYQNLQSRVTRTLLHAFLDPTKSLSQ 196
+ + W +R F A L+ I +G Y L+ R+TRTLL A LD TK +
Sbjct: 339 QENKEEWQDALKSQLAIREFAAILLQHIIKVYGSSYSTLRPRITRTLLRALLDSTKPVGT 398
Query: 197 HYGAIQGLAALGPSVVHLLILPNLELYLKFLEPEMLLEKQKNEMKR 242
YGA+ GL +G V+ L++L NL+++ ++EK +N+ +R
Sbjct: 399 QYGALLGLKNMGNEVLKLVLLGNLKVWYS-----AIIEKNENDYER 439
>FB|FBgn0010417 [details] [associations]
symbol:Taf6 "TBP-associated factor 6" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0051090 "regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000124 "SAGA complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
EMBL:AE014296 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0022008
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0051090 GO:GO:0005669
GO:GO:0051123 eggNOG:COG5095 KO:K03131 GeneTree:ENSGT00640000091486
EMBL:AY051702 EMBL:U06459 EMBL:L25443 RefSeq:NP_524161.2
UniGene:Dm.2802 PDB:1TAF PDBsum:1TAF ProteinModelPortal:P49847
SMR:P49847 DIP:DIP-772N DIP:DIP-778N IntAct:P49847 MINT:MINT-755268
STRING:P49847 PaxDb:P49847 EnsemblMetazoa:FBtr0074941 GeneID:40134
KEGG:dme:Dmel_CG32211 CTD:6878 FlyBase:FBgn0010417
InParanoid:P49847 OMA:KQLATHE OrthoDB:EOG434TN9 PhylomeDB:P49847
EvolutionaryTrace:P49847 GenomeRNAi:40134 NextBio:817166
Bgee:P49847 GermOnline:CG32211 Uniprot:P49847
Length = 606
Score = 378 (138.1 bits), Expect = 1.8e-34, P = 1.8e-34
Identities = 85/205 (41%), Positives = 124/205 (60%)
Query: 31 SVDIRLPVKHVLSKELQLYFDKIRELTVSRSNSTVFKQALLSLAMDSGLHPLVPYFTYFI 90
++ ++ H LS E QLY+ +I E V S+ +AL SL D GLH ++P FI
Sbjct: 200 TIHVKQLATHELSVEQQLYYKEITEACVG-SDEPRRGEALQSLGSDPGLHEMLPRMCTFI 258
Query: 91 SEEVTRSL--KNFSLLFALMRVARSLLRNPHIHIEPYLHQMMPSVITCLVSKRLGNRFS- 147
+E V ++ N +LL LMR+ R+LL NP + +E YLH+++PSV+TC+VSK+L R
Sbjct: 259 AEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPSVMTCIVSKQLCMRPEL 318
Query: 148 DNHWDLRNFVADLIASICTRFGHVYQNLQSRVTRTLLHAFLDPTKSLSQHYGAIQGLAAL 207
DNHW LR+F + L+A IC F + NLQ+RVTR A + LS YG+I GL+ L
Sbjct: 319 DNHWALRDFASRLMAQICKNFNTLTNNLQTRVTRIFSKALQNDKTHLSSLYGSIAGLSEL 378
Query: 208 GPSVVHLLILPNLELYLKFLEPEML 232
G V+ + I+P L+ + +EP +L
Sbjct: 379 GGEVIKVFIIPRLKFISERIEPHLL 403
>UNIPROTKB|Q91857 [details] [associations]
symbol:taf6 "Transcription initiation factor TFIID subunit
6" species:8355 "Xenopus laevis" [GO:0071339 "MLL1 complex"
evidence=ISS] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0071339
GO:GO:0051090 KO:K03131 CTD:6878 HOVERGEN:HBG012489 EMBL:D50054
EMBL:BC068776 PIR:JC4366 RefSeq:NP_001081232.1 UniGene:Xl.3836
ProteinModelPortal:Q91857 GeneID:397724 KEGG:xla:397724
Xenbase:XB-GENE-5774722 Uniprot:Q91857
Length = 618
Score = 377 (137.8 bits), Expect = 2.6e-34, P = 2.6e-34
Identities = 82/184 (44%), Positives = 117/184 (63%)
Query: 40 HVLSKELQLYFDKIRELTVSRSNSTVFKQALLSLAMDSGLHPLVPYFTYFISEEVTRSL- 98
H LS E QLY+ +I E V S +AL S+A D GL+ ++P F+ FISE V ++
Sbjct: 207 HELSVEQQLYYKEITEACVG-SCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVV 265
Query: 99 -KNFSLLFALMRVARSLLRNPHIHIEPYLHQMMPSVITCLVSKRLGNRFS-DNHWDLRNF 156
N +LL LMR+ ++L+ NP +++E YLH+++P+V+TC+VS++L R DNHW LR+F
Sbjct: 266 QNNLALLIYLMRMVKALMDNPTLYLEKYLHELIPAVMTCIVSRQLCLRPDVDNHWALRDF 325
Query: 157 VADLIASICTRFGHVYQNLQSRVTRTLLHAFLDPTKSLSQHYGAIQGLAALGPSVVHLLI 216
A LIA IC F N+QSR+T+T ++D + YG+I GLA LGP VV LI
Sbjct: 326 AARLIAQICKNFSTTTNNIQSRITKTFTKTWVDDRTPWTTRYGSIAGLAELGPDVVKTLI 385
Query: 217 LPNL 220
+P L
Sbjct: 386 VPRL 389
>UNIPROTKB|G8JLM6 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0051090 "regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR011442 Pfam:PF07571
GO:GO:0005634 GO:GO:0005737 GO:GO:0051090 EMBL:AC073842
HGNC:HGNC:11540 ProteinModelPortal:G8JLM6 SMR:G8JLM6
Ensembl:ENST00000418432 Bgee:G8JLM6 Uniprot:G8JLM6
Length = 601
Score = 372 (136.0 bits), Expect = 8.1e-34, P = 8.1e-34
Identities = 84/211 (39%), Positives = 129/211 (61%)
Query: 18 SDGRRSEYREDGI--SVDIRLPVK--HVLSKELQLYFDKIRELTVSRSNSTVFKQALLSL 73
+DG+ E + + +RL + H LS E QLY+ +I E V S +AL S+
Sbjct: 112 ADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVG-SCEAKRAEALQSI 170
Query: 74 AMDSGLHPLVPYFTYFISEEVTRSL--KNFSLLFALMRVARSLLRNPHIHIEPYLHQMMP 131
A D GL+ ++P F+ FISE V ++ N +LL LMR+ ++L+ NP +++E Y+H+++P
Sbjct: 171 ATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIP 230
Query: 132 SVITCLVSKRLGNRFS-DNHWDLRNFVADLIASICTRFGHVYQNLQSRVTRTLLHAFLDP 190
+V+TC+VS++L R DNHW LR+F A L+A IC F N+QSR+T+T +++D
Sbjct: 231 AVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDE 290
Query: 191 TKSLSQHYGAIQGLAALGPSVVHLLILPNLE 221
+ YG+I GLA LG V+ LILP L+
Sbjct: 291 KTPWTTRYGSIAGLAELGHDVIKTLILPRLQ 321
>UNIPROTKB|Q58DG7 [details] [associations]
symbol:TAF6 "TBP-associated factor 6 isoform alpha"
species:9913 "Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA]
[GO:0045786 "negative regulation of cell cycle" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0051090 "regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 InterPro:IPR011442
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 GO:GO:0005737 GO:GO:0008285
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677 GO:GO:0003700
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0006367 GO:GO:0071339
GO:GO:0045786 GO:GO:0051090 GO:GO:0005669 GO:GO:0033276 KO:K03131
GeneTree:ENSGT00640000091486 CTD:6878 HOGENOM:HOG000253001
HOVERGEN:HBG012489 OMA:QEETCQL EMBL:DAAA02058286 EMBL:BT021630
IPI:IPI00717822 RefSeq:NP_001015525.1 UniGene:Bt.13917
STRING:Q58DG7 Ensembl:ENSBTAT00000054282 GeneID:505638
KEGG:bta:505638 InParanoid:Q58DG7 NextBio:20867237 Uniprot:Q58DG7
Length = 678
Score = 374 (136.7 bits), Expect = 8.8e-34, P = 8.8e-34
Identities = 85/213 (39%), Positives = 130/213 (61%)
Query: 16 AVSDGRRSEYREDGI--SVDIRLPVK--HVLSKELQLYFDKIRELTVSRSNSTVFKQALL 71
A +DG+ E + + +RL + H LS E QLY+ +I E V S +AL
Sbjct: 186 APADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVG-SCEAKRAEALQ 244
Query: 72 SLAMDSGLHPLVPYFTYFISEEVTRSL--KNFSLLFALMRVARSLLRNPHIHIEPYLHQM 129
S+A D GL+ ++P F+ FISE V ++ N +LL LMR+ ++L+ NP +++E Y+H++
Sbjct: 245 SIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHEL 304
Query: 130 MPSVITCLVSKRLGNRFS-DNHWDLRNFVADLIASICTRFGHVYQNLQSRVTRTLLHAFL 188
+P+V+TC+VS++L R DNHW LR+F A L+A IC F N+QSR+T+T +++
Sbjct: 305 IPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWV 364
Query: 189 DPTKSLSQHYGAIQGLAALGPSVVHLLILPNLE 221
D + YG+I GLA LG V+ LILP L+
Sbjct: 365 DEKTPWTTRYGSIAGLAELGHDVIKTLILPRLQ 397
>UNIPROTKB|J9NS44 [details] [associations]
symbol:TAF6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
GO:GO:0005634 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0006352
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0051090 KO:K03131
GeneTree:ENSGT00640000091486 CTD:6878 EMBL:AAEX03004275
RefSeq:XP_546964.2 Ensembl:ENSCAFT00000049298 GeneID:489846
KEGG:cfa:489846 Uniprot:J9NS44
Length = 678
Score = 374 (136.7 bits), Expect = 8.8e-34, P = 8.8e-34
Identities = 85/213 (39%), Positives = 130/213 (61%)
Query: 16 AVSDGRRSEYREDGI--SVDIRLPVK--HVLSKELQLYFDKIRELTVSRSNSTVFKQALL 71
A +DG+ E + + +RL + H LS E QLY+ +I E V S +AL
Sbjct: 186 APADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVG-SCEAKRAEALQ 244
Query: 72 SLAMDSGLHPLVPYFTYFISEEVTRSL--KNFSLLFALMRVARSLLRNPHIHIEPYLHQM 129
S+A D GL+ ++P F+ FISE V ++ N +LL LMR+ ++L+ NP +++E Y+H++
Sbjct: 245 SIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHEL 304
Query: 130 MPSVITCLVSKRLGNRFS-DNHWDLRNFVADLIASICTRFGHVYQNLQSRVTRTLLHAFL 188
+P+V+TC+VS++L R DNHW LR+F A L+A IC F N+QSR+T+T +++
Sbjct: 305 IPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWV 364
Query: 189 DPTKSLSQHYGAIQGLAALGPSVVHLLILPNLE 221
D + YG+I GLA LG V+ LILP L+
Sbjct: 365 DEKTPWTTRYGSIAGLAELGHDVIKTLILPRLQ 397
>MGI|MGI:109129 [details] [associations]
symbol:Taf6 "TAF6 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10090 "Mus musculus" [GO:0003677
"DNA binding" evidence=ISO;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005669 "transcription factor TFIID complex" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=ISO]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISO] [GO:0008285 "negative
regulation of cell proliferation" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0045786
"negative regulation of cell cycle" evidence=ISO] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0051090
"regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR004823 InterPro:IPR009072 InterPro:IPR011442
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 MGI:MGI:109129
GO:GO:0005737 GO:GO:0008285 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003677 GO:GO:0003700 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0006367 GO:GO:0071339 GO:GO:0045786 GO:GO:0051090
GO:GO:0005669 GO:GO:0033276 eggNOG:COG5095 KO:K03131
GeneTree:ENSGT00640000091486 CTD:6878 HOGENOM:HOG000253001
HOVERGEN:HBG012489 OrthoDB:EOG4MKNG0 EMBL:D49439 EMBL:BC058583
IPI:IPI00124566 PIR:JC4245 RefSeq:NP_033341.1 UniGene:Mm.248517
ProteinModelPortal:Q62311 SMR:Q62311 DIP:DIP-493N IntAct:Q62311
MINT:MINT-269059 STRING:Q62311 PhosphoSite:Q62311 PaxDb:Q62311
PRIDE:Q62311 Ensembl:ENSMUST00000048698 Ensembl:ENSMUST00000110936
GeneID:21343 KEGG:mmu:21343 UCSC:uc009aew.1 InParanoid:Q62311
OMA:QEETCQL NextBio:300524 Bgee:Q62311 Genevestigator:Q62311
GermOnline:ENSMUSG00000036980 Uniprot:Q62311
Length = 678
Score = 374 (136.7 bits), Expect = 8.8e-34, P = 8.8e-34
Identities = 85/213 (39%), Positives = 129/213 (60%)
Query: 16 AVSDGRRSEYREDGI--SVDIRLPVK--HVLSKELQLYFDKIRELTVSRSNSTVFKQALL 71
A +DG+ E + + RL + H LS E QLY+ +I E V S +AL
Sbjct: 186 AAADGKGKEKKAPPLLEGAPFRLKPRSIHELSVEQQLYYKEITEACVG-SCEAKRAEALQ 244
Query: 72 SLAMDSGLHPLVPYFTYFISEEVTRSL--KNFSLLFALMRVARSLLRNPHIHIEPYLHQM 129
S+A D GL+ ++P F+ FISE V ++ N +LL LMR+ ++L+ NP +++E Y+H++
Sbjct: 245 SIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHEL 304
Query: 130 MPSVITCLVSKRLGNRFS-DNHWDLRNFVADLIASICTRFGHVYQNLQSRVTRTLLHAFL 188
+P+V+TC+VS++L R DNHW LR+F A L+A IC F N+QSR+T+T +++
Sbjct: 305 IPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWV 364
Query: 189 DPTKSLSQHYGAIQGLAALGPSVVHLLILPNLE 221
D + YG+I GLA LG V+ LILP L+
Sbjct: 365 DEKTPWTTRYGSIAGLAELGHDVIKTLILPRLQ 397
>RGD|1311608 [details] [associations]
symbol:Taf6 "TAF6 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISO]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=ISO]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008285 "negative regulation
of cell proliferation" evidence=IEA;ISO] [GO:0033276 "transcription
factor TFTC complex" evidence=IEA;ISO] [GO:0045786 "negative
regulation of cell cycle" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0051090 "regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR004823 InterPro:IPR009072 InterPro:IPR011442
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 RGD:1311608 GO:GO:0005737
GO:GO:0008285 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677
GO:GO:0003700 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0006367
GO:GO:0071339 GO:GO:0045786 GO:GO:0051090 GO:GO:0005669
GO:GO:0033276 eggNOG:COG5095 GeneTree:ENSGT00640000091486
HOGENOM:HOG000253001 HOVERGEN:HBG012489 OrthoDB:EOG4MKNG0
OMA:QEETCQL EMBL:D49446 IPI:IPI00212680 UniGene:Rn.102447
ProteinModelPortal:Q63801 STRING:Q63801 PhosphoSite:Q63801
PRIDE:Q63801 Ensembl:ENSRNOT00000001829 UCSC:RGD:1311608
InParanoid:Q63801 Genevestigator:Q63801
GermOnline:ENSRNOG00000001355 Uniprot:Q63801
Length = 678
Score = 374 (136.7 bits), Expect = 8.8e-34, P = 8.8e-34
Identities = 85/213 (39%), Positives = 129/213 (60%)
Query: 16 AVSDGRRSEYREDGI--SVDIRLPVK--HVLSKELQLYFDKIRELTVSRSNSTVFKQALL 71
A +DG+ E + + RL + H LS E QLY+ +I E V S +AL
Sbjct: 186 AAADGKGKEKKAPPLLEGAPFRLKPRSIHELSVEQQLYYKEITEACVG-SCEAKRAEALQ 244
Query: 72 SLAMDSGLHPLVPYFTYFISEEVTRSL--KNFSLLFALMRVARSLLRNPHIHIEPYLHQM 129
S+A D GL+ ++P F+ FISE V ++ N +LL LMR+ ++L+ NP +++E Y+H++
Sbjct: 245 SIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHEL 304
Query: 130 MPSVITCLVSKRLGNRFS-DNHWDLRNFVADLIASICTRFGHVYQNLQSRVTRTLLHAFL 188
+P+V+TC+VS++L R DNHW LR+F A L+A IC F N+QSR+T+T +++
Sbjct: 305 IPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWV 364
Query: 189 DPTKSLSQHYGAIQGLAALGPSVVHLLILPNLE 221
D + YG+I GLA LG V+ LILP L+
Sbjct: 365 DEKTPWTTRYGSIAGLAELGHDVIKTLILPRLQ 397
>UNIPROTKB|E2RFB9 [details] [associations]
symbol:TAF6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071339 "MLL1 complex" evidence=IEA]
[GO:0045786 "negative regulation of cell cycle" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0051090 "regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 InterPro:IPR011442
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 GO:GO:0005737 GO:GO:0008285
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677 GO:GO:0003700
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0006367 GO:GO:0071339
GO:GO:0045786 GO:GO:0051090 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00640000091486 OMA:QEETCQL EMBL:AAEX03004275
Ensembl:ENSCAFT00000023284 NextBio:20862962 Uniprot:E2RFB9
Length = 698
Score = 374 (136.7 bits), Expect = 9.9e-34, P = 9.9e-34
Identities = 85/213 (39%), Positives = 130/213 (61%)
Query: 16 AVSDGRRSEYREDGI--SVDIRLPVK--HVLSKELQLYFDKIRELTVSRSNSTVFKQALL 71
A +DG+ E + + +RL + H LS E QLY+ +I E V S +AL
Sbjct: 206 APADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVG-SCEAKRAEALQ 264
Query: 72 SLAMDSGLHPLVPYFTYFISEEVTRSL--KNFSLLFALMRVARSLLRNPHIHIEPYLHQM 129
S+A D GL+ ++P F+ FISE V ++ N +LL LMR+ ++L+ NP +++E Y+H++
Sbjct: 265 SIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHEL 324
Query: 130 MPSVITCLVSKRLGNRFS-DNHWDLRNFVADLIASICTRFGHVYQNLQSRVTRTLLHAFL 188
+P+V+TC+VS++L R DNHW LR+F A L+A IC F N+QSR+T+T +++
Sbjct: 325 IPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWV 384
Query: 189 DPTKSLSQHYGAIQGLAALGPSVVHLLILPNLE 221
D + YG+I GLA LG V+ LILP L+
Sbjct: 385 DEKTPWTTRYGSIAGLAELGHDVIKTLILPRLQ 417
>UNIPROTKB|P49848 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0051090 "regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IDA] [GO:0045786 "negative regulation of cell cycle"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=NAS;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IDA;TAS] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0071339 "MLL1 complex" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006368 "transcription
elongation from RNA polymerase II promoter" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] Reactome:REACT_71
InterPro:IPR004823 InterPro:IPR009072 InterPro:IPR011442
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 GO:GO:0005737
Reactome:REACT_116125 GO:GO:0008285 GO:GO:0016032 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0003677 GO:GO:0003700 Gene3D:1.10.20.10
SUPFAM:SSF47113 EMBL:CH236956 EMBL:CH471091 GO:GO:0006368
GO:GO:0006367 GO:GO:0071339 GO:GO:0045786 GO:GO:0051090
Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276 eggNOG:COG5095
KO:K03131 CTD:6878 EMBL:L25444 EMBL:U31659 EMBL:AK300005
EMBL:CR627390 EMBL:AY149894 EMBL:BC018115 IPI:IPI00028579
IPI:IPI00376952 IPI:IPI00924712 RefSeq:NP_001177344.1
RefSeq:NP_005632.1 RefSeq:NP_647476.1 UniGene:Hs.489309
ProteinModelPortal:P49848 SMR:P49848 DIP:DIP-29288N DIP:DIP-773N
IntAct:P49848 MINT:MINT-1211769 STRING:P49848 PhosphoSite:P49848
DMDM:1729810 PaxDb:P49848 PRIDE:P49848 DNASU:6878
Ensembl:ENST00000344095 Ensembl:ENST00000437822
Ensembl:ENST00000452041 Ensembl:ENST00000453269 GeneID:6878
KEGG:hsa:6878 UCSC:uc003uti.3 GeneCards:GC07M099704 HGNC:HGNC:11540
HPA:HPA006566 MIM:602955 neXtProt:NX_P49848 PharmGKB:PA36315
HOGENOM:HOG000253001 HOVERGEN:HBG012489 InParanoid:P49848
OrthoDB:EOG4MKNG0 PhylomeDB:P49848 GenomeRNAi:6878 NextBio:26859
ArrayExpress:P49848 Bgee:P49848 CleanEx:HS_TAF6
Genevestigator:P49848 GermOnline:ENSG00000106290 Uniprot:P49848
Length = 677
Score = 372 (136.0 bits), Expect = 1.4e-33, P = 1.4e-33
Identities = 84/211 (39%), Positives = 129/211 (61%)
Query: 18 SDGRRSEYREDGI--SVDIRLPVK--HVLSKELQLYFDKIRELTVSRSNSTVFKQALLSL 73
+DG+ E + + +RL + H LS E QLY+ +I E V S +AL S+
Sbjct: 188 ADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVG-SCEAKRAEALQSI 246
Query: 74 AMDSGLHPLVPYFTYFISEEVTRSL--KNFSLLFALMRVARSLLRNPHIHIEPYLHQMMP 131
A D GL+ ++P F+ FISE V ++ N +LL LMR+ ++L+ NP +++E Y+H+++P
Sbjct: 247 ATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIP 306
Query: 132 SVITCLVSKRLGNRFS-DNHWDLRNFVADLIASICTRFGHVYQNLQSRVTRTLLHAFLDP 190
+V+TC+VS++L R DNHW LR+F A L+A IC F N+QSR+T+T +++D
Sbjct: 307 AVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDE 366
Query: 191 TKSLSQHYGAIQGLAALGPSVVHLLILPNLE 221
+ YG+I GLA LG V+ LILP L+
Sbjct: 367 KTPWTTRYGSIAGLAELGHDVIKTLILPRLQ 397
>UNIPROTKB|J3KR72 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0051090 "regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR004823
InterPro:IPR009072 InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571
SMART:SM00803 GO:GO:0005634 GO:GO:0006352 Gene3D:1.10.20.10
SUPFAM:SSF47113 GO:GO:0051090 EMBL:AC073842 HGNC:HGNC:11540
OMA:QEETCQL ProteinModelPortal:J3KR72 Ensembl:ENST00000472509
Uniprot:J3KR72
Length = 734
Score = 372 (136.0 bits), Expect = 1.9e-33, P = 1.9e-33
Identities = 84/211 (39%), Positives = 129/211 (61%)
Query: 18 SDGRRSEYREDGI--SVDIRLPVK--HVLSKELQLYFDKIRELTVSRSNSTVFKQALLSL 73
+DG+ E + + +RL + H LS E QLY+ +I E V S +AL S+
Sbjct: 245 ADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVG-SCEAKRAEALQSI 303
Query: 74 AMDSGLHPLVPYFTYFISEEVTRSL--KNFSLLFALMRVARSLLRNPHIHIEPYLHQMMP 131
A D GL+ ++P F+ FISE V ++ N +LL LMR+ ++L+ NP +++E Y+H+++P
Sbjct: 304 ATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIP 363
Query: 132 SVITCLVSKRLGNRFS-DNHWDLRNFVADLIASICTRFGHVYQNLQSRVTRTLLHAFLDP 190
+V+TC+VS++L R DNHW LR+F A L+A IC F N+QSR+T+T +++D
Sbjct: 364 AVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDE 423
Query: 191 TKSLSQHYGAIQGLAALGPSVVHLLILPNLE 221
+ YG+I GLA LG V+ LILP L+
Sbjct: 424 KTPWTTRYGSIAGLAELGHDVIKTLILPRLQ 454
>ZFIN|ZDB-GENE-040912-23 [details] [associations]
symbol:taf6 "TAF6 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0051090 "regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
ZFIN:ZDB-GENE-040912-23 GO:GO:0005634 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0051090 KO:K03131 GeneTree:ENSGT00640000091486 CTD:6878
HOGENOM:HOG000253001 HOVERGEN:HBG012489 EMBL:BX927335
EMBL:CABZ01016379 EMBL:CR847545 EMBL:BC081612 IPI:IPI00491415
RefSeq:NP_001004557.1 UniGene:Dr.36557 STRING:Q66HZ5
Ensembl:ENSDART00000042901 GeneID:447818 KEGG:dre:447818
InParanoid:Q66HZ5 NextBio:20832342 Uniprot:Q66HZ5
Length = 636
Score = 369 (135.0 bits), Expect = 2.4e-33, P = 2.4e-33
Identities = 81/184 (44%), Positives = 114/184 (61%)
Query: 40 HVLSKELQLYFDKIRELTVSRSNSTVFKQALLSLAMDSGLHPLVPYFTYFISEEVTRSL- 98
H LS E QLY+ +I E V S +AL S+A D GL+ ++P F+ FISE V ++
Sbjct: 204 HELSVEQQLYYKEITEACVG-SCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVV 262
Query: 99 -KNFSLLFALMRVARSLLRNPHIHIEPYLHQMMPSVITCLVSKRLGNRFS-DNHWDLRNF 156
N +LL LMR+ ++L+ NP +++E YLH+++P+V+TC+VSK+L R DNHW LR+F
Sbjct: 263 QNNLALLIYLMRMVKALMDNPTLYLEKYLHELIPAVVTCIVSKQLCLRPDVDNHWALRDF 322
Query: 157 VADLIASICTRFGHVYQNLQSRVTRTLLHAFLDPTKSLSQHYGAIQGLAALGPSVVHLLI 216
A L+A C F N+QSR+T+T A LD + YG I GLA LG V+ LI
Sbjct: 323 AARLMAQSCKTFSTTTNNIQSRITKTFTKALLDEKTQWTTRYGCIAGLAELGHDVIKTLI 382
Query: 217 LPNL 220
+P L
Sbjct: 383 IPRL 386
>SGD|S000003080 [details] [associations]
symbol:TAF6 "Subunit (60 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051090 "regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0046695
"SLIK (SAGA-like) complex" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0001075 "RNA polymerase II core
promoter sequence-specific DNA binding transcription factor
activity involved in preinitiation complex assembly" evidence=IC]
[GO:0000124 "SAGA complex" evidence=IDA] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0016568
"chromatin modification" evidence=IDA] [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=IDA;IPI] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0032947 "protein complex scaffold" evidence=IMP]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
SGD:S000003080 EMBL:BK006941 GO:GO:0016573 GO:GO:0003682
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0000124 GO:GO:0046695
GO:GO:0032947 GO:GO:0051090 GO:GO:0001102 EMBL:X97644 GO:GO:0005669
GO:GO:0051123 EMBL:Z72634 eggNOG:COG5095 KO:K03131
GeneTree:ENSGT00640000091486 HOGENOM:HOG000159894 OrthoDB:EOG45XC4M
EMBL:L40145 EMBL:AY723809 PIR:S64120 RefSeq:NP_011403.1
ProteinModelPortal:P53040 SMR:P53040 DIP:DIP-981N IntAct:P53040
MINT:MINT-405577 STRING:P53040 PaxDb:P53040 PeptideAtlas:P53040
EnsemblFungi:YGL112C GeneID:852766 KEGG:sce:YGL112C CYGD:YGL112c
OMA:LEMIYSL NextBio:972224 Genevestigator:P53040 GermOnline:YGL112C
Uniprot:P53040
Length = 516
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 86/220 (39%), Positives = 134/220 (60%)
Query: 12 TVLTAVSDGRRSEYRED---GISVDIRLPVKHVLSKELQLYFDK-IRELTV-SRSNSTV- 65
T +V+D S++ + G + +++ VKHVLSKELQ+YF+K I LT S+++
Sbjct: 186 TASASVTDTGASQHLSNVKPGQNTEVKPLVKHVLSKELQIYFNKVISTLTAKSQADEAAQ 245
Query: 66 -FKQALL-SLAMDSGLHPLVPYFTYFISEEVTRSLKNFSLLFALMRVARSLLRNPHIHIE 123
KQA L SL DSGLH LVPYF FI+E++T++L + LL ++ + SLL N I ++
Sbjct: 246 HMKQAALTSLRTDSGLHQLVPYFIQFIAEQITQNLSDLQLLTTILEMIYSLLSNTSIFLD 305
Query: 124 PYLHQMMPSVITCLVSKRLG-----------NRFSDNHWDLRNFVADLIASICTRFGHVY 172
PY+H +MPS++T L++K+LG + F + LR+F A L+ + +F Y
Sbjct: 306 PYIHSLMPSILTLLLAKKLGGSPKDDSPQEIHEFLERTNALRDFAASLLDYVLKKFPQAY 365
Query: 173 QNLQSRVTRTLLHAFLDPTKSLSQHYGAIQGLAAL-GPSV 211
++L+ RVTRTLL FLD + +YG ++G++ L G S+
Sbjct: 366 KSLKPRVTRTLLKTFLDINRVFGTYYGCLKGVSVLEGESI 405
>MGI|MGI:2444957 [details] [associations]
symbol:Taf6l "TAF6-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0043966 "histone H3
acetylation" evidence=ISO] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0051090 "regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
MGI:MGI:2444957 GO:GO:0005634 GO:GO:0006352 Gene3D:1.10.20.10
SUPFAM:SSF47113 GO:GO:0051090 CTD:10629 eggNOG:COG5095
HOGENOM:HOG000059613 HOVERGEN:HBG061566 KO:K03131 OrthoDB:EOG498V0F
EMBL:AK077149 EMBL:BC028647 IPI:IPI00153596 IPI:IPI00405376
RefSeq:NP_001171269.1 RefSeq:NP_666204.2 UniGene:Mm.220886
ProteinModelPortal:Q8R2K4 SMR:Q8R2K4 IntAct:Q8R2K4 STRING:Q8R2K4
PhosphoSite:Q8R2K4 PRIDE:Q8R2K4 Ensembl:ENSMUST00000177056
GeneID:225895 KEGG:mmu:225895 UCSC:uc008gmx.2 UCSC:uc008gmy.2
GeneTree:ENSGT00640000091486 InParanoid:Q8R2K4 NextBio:377857
Bgee:Q8R2K4 Genevestigator:Q8R2K4 GermOnline:ENSMUSG00000003680
Uniprot:Q8R2K4
Length = 616
Score = 271 (100.5 bits), Expect = 4.2e-21, P = 4.2e-21
Identities = 83/294 (28%), Positives = 141/294 (47%)
Query: 42 LSKELQLYFDKIRELTVSRSNSTVFKQALLSLAMDSGLHPLVPYFTYFIS--EEVTRSLK 99
L+ +L Y+ ++ + + + K AL L +S + L+PYF Y +S + V+ L+
Sbjct: 153 LTDDLLKYYQQVTRAVLG-DDPQLMKVALQDLQTNSKIAALLPYFVYVVSGVKSVSHDLE 211
Query: 100 NFSLLFALMRVARSLLRNPHIHIEPYLHQMMPSVITCLVSKRLG--NRFSDNHWDLRNFV 157
L L++VARSL+RNPH+ + PY+ ++ SV+ C++ N +D HW LR+
Sbjct: 212 Q---LHRLLQVARSLIRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGA 267
Query: 158 ADLIASICTRFGHVYQNLQSRVTRTLLHAFLDPTKSLSQHYGAIQGLAALGPSVVHLLIL 217
A L++ I G + L ++ +L DP + L HYGA+ GL ALG V ++
Sbjct: 268 ALLLSHIFWTHGDLVSGLYQQILLSLQKVLTDPVRPLCSHYGAVVGLHALGWKAVERVLY 327
Query: 218 PNLELYLKFLEPEMLLEKQKNEMKRHEAWRVYGALQCAAGLCVYDRLKTVLLRPPKQSRW 277
P+L Y L+ + N + + +VYGA+ L +RL + + + +R
Sbjct: 328 PHLPTYWTNLQAVLDDYSVSNAQVKADGHKVYGAI-----LVAVERLLKMKAQAAEPNRG 382
Query: 278 ESNRKGMIVFPSKRKASMDNLMLQ--PPVKKMATLGPMGVMPVNSMAVNMQGPS 329
+G + D+L+LQ PP T G+ P + +A + PS
Sbjct: 383 GLGGRG---YRPAEDLPWDSLLLQESPPGGSSETGFGSGLPPPSGVA-GPEDPS 432
>UNIPROTKB|F1MDZ8 [details] [associations]
symbol:TAF6L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0051090
"regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
GO:GO:0006352 GO:GO:0003713 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0051090 GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 OMA:MPQLTAN
GeneTree:ENSGT00640000091486 EMBL:DAAA02063486 IPI:IPI00706361
Ensembl:ENSBTAT00000012482 ArrayExpress:F1MDZ8 Uniprot:F1MDZ8
Length = 665
Score = 266 (98.7 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 67/218 (30%), Positives = 113/218 (51%)
Query: 42 LSKELQLYFDKIRELTVSRSNSTVFKQALLSLAMDSGLHPLVPYFTYFIS--EEVTRSLK 99
L+ +L Y+ ++ + + + K AL L +S + L+PYF Y +S + V+ L+
Sbjct: 199 LTDDLLKYYQQVTRAVLG-DDPQLMKIALHDLQTNSKIAALLPYFVYVVSGVKSVSHDLE 257
Query: 100 NFSLLFALMRVARSLLRNPHIHIEPYLHQMMPSVITCLVSKRLG--NRFSDNHWDLRNFV 157
L L++VARSL+RNPH+ + PY+ ++ SV+ C++ N +D HW LR+
Sbjct: 258 Q---LHRLLQVARSLVRNPHLCLVPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGA 313
Query: 158 ADLIASICTRFGHVYQNLQSRVTRTLLHAFLDPTKSLSQHYGAIQGLAALGPSVVHLLIL 217
A L++ I +G + L ++ +L DP + L HYGA+ GL ALG V ++
Sbjct: 314 ALLLSHIFWTYGDLVNGLYQQILLSLQKVLADPVRPLCSHYGAVVGLHALGWKAVERVLY 373
Query: 218 PNLELYLKFLEPEMLLEKQKNEMKRHEAWRVYGALQCA 255
P+L Y L+ + N + + +VYGA+ A
Sbjct: 374 PHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 411
>UNIPROTKB|E2QUN8 [details] [associations]
symbol:TAF6L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0051090
"regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
GO:GO:0006352 GO:GO:0003713 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0051090 GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 CTD:10629
KO:K03131 OMA:MPQLTAN GeneTree:ENSGT00640000091486
EMBL:AAEX03011662 RefSeq:XP_533259.2 Ensembl:ENSCAFT00000024787
GeneID:476051 KEGG:cfa:476051 Uniprot:E2QUN8
Length = 625
Score = 264 (98.0 bits), Expect = 3.1e-20, P = 3.1e-20
Identities = 82/293 (27%), Positives = 140/293 (47%)
Query: 42 LSKELQLYFDKIRELTVSRSNSTVFKQALLSLAMDSGLHPLVPYFTYFIS--EEVTRSLK 99
L+ +L Y+ ++ + + + K AL L +S + L+PYF Y +S + V+ L+
Sbjct: 160 LTDDLLKYYQQVTRAVLG-DDPQLMKIALQDLQTNSKIAALLPYFVYVVSGVKSVSHDLE 218
Query: 100 NFSLLFALMRVARSLLRNPHIHIEPYLHQMMPSVITCLVSKRLG--NRFSDNHWDLRNFV 157
L L++VARSL+RNPH+ + PY+ ++ SV+ C++ N +D HW LR+
Sbjct: 219 Q---LHRLLQVARSLVRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGA 274
Query: 158 ADLIASICTRFGHVYQNLQSRVTRTLLHAFLDPTKSLSQHYGAIQGLAALGPSVVHLLIL 217
A L++ I G + L ++ +L DP + L HYGA+ GL ALG V ++
Sbjct: 275 ALLLSHIFWTHGDLVSGLYQQILLSLQKVLADPVRPLCSHYGAVVGLHALGWKAVERVLY 334
Query: 218 PNLELYLKFLEPEMLLEKQKNEMKRHEAWRVYGALQCAAGLCVYDRLKTVLLRPPKQSRW 277
P+L Y L+ + N + + +VYGA+ L +RL + + + ++
Sbjct: 335 PHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAI-----LVAVERLLKMKAQAAEPNKG 389
Query: 278 ESNRKGMIVFPSKRKASMDNLMLQP-PVKKMATLGPMGVMPVNSMAVNMQGPS 329
+ +G+ S D+L+LQ P A G V P+ + PS
Sbjct: 390 GPSGRGV---RSSDDLPWDSLLLQESPSGGGAEPGFGSVHPLPPGGAGPEDPS 439
>UNIPROTKB|I3LPI1 [details] [associations]
symbol:TAF6L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0051090
"regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
GO:GO:0006352 GO:GO:0003713 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0051090 GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 OMA:MPQLTAN
GeneTree:ENSGT00640000091486 EMBL:FP312617
Ensembl:ENSSSCT00000022269 Uniprot:I3LPI1
Length = 624
Score = 263 (97.6 bits), Expect = 4.1e-20, P = 4.1e-20
Identities = 67/218 (30%), Positives = 112/218 (51%)
Query: 42 LSKELQLYFDKIRELTVSRSNSTVFKQALLSLAMDSGLHPLVPYFTYFIS--EEVTRSLK 99
L+ +L Y+ ++ + + + K AL L +S + L+PYF Y +S + V+ L+
Sbjct: 160 LTDDLLKYYQQVTRAVLG-DDPQLMKIALQDLQTNSKIAALLPYFVYVVSGVKSVSHDLE 218
Query: 100 NFSLLFALMRVARSLLRNPHIHIEPYLHQMMPSVITCLVSKRLG--NRFSDNHWDLRNFV 157
L L++VARSL+RNPH+ + PY+ ++ SV+ C++ N +D HW LR+
Sbjct: 219 Q---LHRLLQVARSLVRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGA 274
Query: 158 ADLIASICTRFGHVYQNLQSRVTRTLLHAFLDPTKSLSQHYGAIQGLAALGPSVVHLLIL 217
A L++ I G + L ++ +L DP + L HYGA+ GL ALG V ++
Sbjct: 275 ALLLSHIFWTHGDLVSGLYQQILLSLQKVLADPVRPLCSHYGAVVGLHALGWKAVERVLY 334
Query: 218 PNLELYLKFLEPEMLLEKQKNEMKRHEAWRVYGALQCA 255
P+L Y L+ + N + + +VYGA+ A
Sbjct: 335 PHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 372
>UNIPROTKB|Q9Y6J9 [details] [associations]
symbol:TAF6L "TAF6-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 6L"
species:9606 "Homo sapiens" [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0051090 "regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0003713 "transcription coactivator activity"
evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA] [GO:0043966
"histone H3 acetylation" evidence=IDA] [GO:0000118 "histone
deacetylase complex" evidence=TAS] [GO:0003677 "DNA binding"
evidence=TAS] [GO:0006338 "chromatin remodeling" evidence=TAS]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR004823 InterPro:IPR009072 InterPro:IPR011442
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 GO:GO:0003677 EMBL:CH471076
GO:GO:0006352 GO:GO:0006357 GO:GO:0006338 GO:GO:0003713
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0051090 GO:GO:0043966
GO:GO:0000118 GO:GO:0030914 EMBL:AF069735 EMBL:AK314330
IPI:IPI00007957 RefSeq:NP_006464.1 UniGene:Hs.714400
ProteinModelPortal:Q9Y6J9 SMR:Q9Y6J9 IntAct:Q9Y6J9
MINT:MINT-1456123 STRING:Q9Y6J9 PhosphoSite:Q9Y6J9 DMDM:46577572
PaxDb:Q9Y6J9 PeptideAtlas:Q9Y6J9 PRIDE:Q9Y6J9
Ensembl:ENST00000294168 GeneID:10629 KEGG:hsa:10629 UCSC:uc001nvc.3
CTD:10629 GeneCards:GC11P062538 HGNC:HGNC:17305 MIM:602946
neXtProt:NX_Q9Y6J9 PharmGKB:PA38224 eggNOG:COG5095
HOGENOM:HOG000059613 HOVERGEN:HBG061566 InParanoid:Q9Y6J9 KO:K03131
OMA:MPQLTAN OrthoDB:EOG498V0F PhylomeDB:Q9Y6J9 ChiTaRS:TAF6L
GenomeRNAi:10629 NextBio:40385 ArrayExpress:Q9Y6J9 Bgee:Q9Y6J9
CleanEx:HS_TAF6L Genevestigator:Q9Y6J9 GermOnline:ENSG00000162227
Uniprot:Q9Y6J9
Length = 622
Score = 254 (94.5 bits), Expect = 4.7e-19, P = 4.7e-19
Identities = 67/218 (30%), Positives = 110/218 (50%)
Query: 42 LSKELQLYFDKIRELTVSRSNSTVFKQALLSLAMDSGLHPLVPYFTYFIS--EEVTRSLK 99
L+ +L Y+ ++ + + + K AL L +S + L+PYF Y +S + V+ L+
Sbjct: 153 LTDDLLKYYHQVTRAVLG-DDPQLMKVALQDLQTNSKIGALLPYFVYVVSGVKSVSHDLE 211
Query: 100 NFSLLFALMRVARSLLRNPHIHIEPYLHQMMPSVITCLVSKRLG--NRFSDNHWDLRNFV 157
L L++VARSL RNPH+ + PY+ ++ SV+ C++ N +D HW LR+
Sbjct: 212 Q---LHRLLQVARSLFRNPHLCLGPYVRCLVGSVLYCVLEPLAASINPLND-HWTLRDGA 267
Query: 158 ADLIASICTRFGHVYQNLQSRVTRTLLHAFLDPTKSLSQHYGAIQGLAALGPSVVHLLIL 217
A L++ I G + L + +L DP + L HYGA+ GL ALG V ++
Sbjct: 268 ALLLSHIFWTHGDLVSGLYQHILLSLQKILADPVRPLCCHYGAVVGLHALGWKAVERVLY 327
Query: 218 PNLELYLKFLEPEMLLEKQKNEMKRHEAWRVYGALQCA 255
P+L Y L+ + N + + +VYGA+ A
Sbjct: 328 PHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 365
>ZFIN|ZDB-GENE-030131-6789 [details] [associations]
symbol:taf6l "TAF6-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
ZFIN:ZDB-GENE-030131-6789 GO:GO:0005634 GO:GO:0006352
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0051090 CTD:10629 KO:K03131
OMA:MPQLTAN GeneTree:ENSGT00640000091486 EMBL:AL954709
IPI:IPI00901427 RefSeq:NP_001186651.1 UniGene:Dr.75265
Ensembl:ENSDART00000113120 GeneID:557363 KEGG:dre:557363
NextBio:20881960 Bgee:E7FEV1 Uniprot:E7FEV1
Length = 641
Score = 251 (93.4 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 64/216 (29%), Positives = 111/216 (51%)
Query: 42 LSKELQLYFDKIRELTVSRSNSTVFKQALLSLAMDSGLHPLVPYFTYFISEEVTRSLKNF 101
LS++L Y+ +I + + + K ALL L +S + L+PYF Y IS + S +
Sbjct: 153 LSEDLLKYYQQITRAILGE-DPHLMKVALLDLQSNSKIAALLPYFVYVISGVKSVS-HDL 210
Query: 102 SLLFALMRVARSLLRNPHIHIEPYLHQMMPSVITCLVSKRLG--NRFSDNHWDLRNFVAD 159
L L+ + +SL++NP++++ Y+ ++ SV+ C++ N +D HW LR++ A
Sbjct: 211 DQLNRLLHMVKSLVQNPYLYLGSYVRSLVSSVMYCILEPLAASINPLND-HWTLRDYAAL 269
Query: 160 LIASICTRFGHVYQNLQSRVTRTLLHAFLDPTKSLSQHYGAIQGLAALGPSVVHLLILPN 219
L++ I G + L ++ +L DP + L HYGA+ GL ALG V ++ P+
Sbjct: 270 LLSHIFWTHGDLVSGLYHQILLSLQKVLSDPVRPLCSHYGAVVGLHALGWKAVERVLYPH 329
Query: 220 LELYLKFLEPEMLLEKQKNEMKRHEAWRVYGALQCA 255
L Y L+ + N + + +VYGA+ A
Sbjct: 330 LPAYWANLQAVLDDYSVSNAQVKADGHKVYGAILVA 365
>FB|FBgn0014342 [details] [associations]
symbol:mia "meiosis I arrest" species:7227 "Drosophila
melanogaster" [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0007141 "male meiosis I" evidence=IMP] [GO:0048515 "spermatid
differentiation" evidence=IMP] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0007286 "spermatid development"
evidence=TAS] [GO:0007126 "meiosis" evidence=TAS] [GO:0005669
"transcription factor TFIID complex" evidence=ISS] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=ISS] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] InterPro:IPR011442 Pfam:PF07571 GO:GO:0005730
GO:GO:0007286 GO:GO:0001673 GO:GO:0006367 GO:GO:0010468
GO:GO:0051090 GO:GO:0007141 GO:GO:0005669 EMBL:AY752878
ProteinModelPortal:Q5UEC4 SMR:Q5UEC4 STRING:Q5UEC4 PRIDE:Q5UEC4
FlyBase:FBgn0014342 InParanoid:Q5UEC4 OrthoDB:EOG41G1KF
ArrayExpress:Q5UEC4 Bgee:Q5UEC4 Uniprot:Q5UEC4
Length = 593
Score = 231 (86.4 bits), Expect = 4.8e-16, Sum P(2) = 4.8e-16
Identities = 61/196 (31%), Positives = 104/196 (53%)
Query: 39 KHVLSKELQLYFDKIRELTVSRSNSTVFKQALLSLAMDSGLHPLVPYFTYFISEEVTRSL 98
++ LS E Q +F+ + E V S AL +++ D L L+P T FI++ V ++
Sbjct: 183 RYPLSMEQQNFFELVTEACVGDLESRRVL-ALKAISTDPSLEELLPRLTKFIADAVAINV 241
Query: 99 --KNFSLLFALMRVARSLLRNPHIHIEPYLHQMMPSVITCLVSKRL-GNRFSDNHWDLRN 155
+N LL LMR+ R+LL N + YLH ++P+V++CL++K++ + S++HW LR
Sbjct: 242 AQQNLPLLLYLMRMVRALLGNQRFSLLQYLHLLLPAVLSCLLAKQVCASPNSEDHWALRE 301
Query: 156 FVADLIASICTRFGHVYQNLQSRVTRTLLHAFLDPTKSLSQHYGAIQGLAALGPSVVHLL 215
+ +++A I +F + RV A L K L+ +GA+ GL +G V
Sbjct: 302 YSGNIMAHIVRQFDAADNGILPRVIGVYNKALLK--KPLTTVFGAVIGLGKMGNHAVLAC 359
Query: 216 ILPNLELYLKFLEPEM 231
ILP L+ + ++ M
Sbjct: 360 ILPQLKYLSEHIDSHM 375
Score = 37 (18.1 bits), Expect = 4.8e-16, Sum P(2) = 4.8e-16
Identities = 8/29 (27%), Positives = 12/29 (41%)
Query: 316 MPVNSMAVNMQGPSGGFSTPVEGPRAGVS 344
+P N + Q P +S V G +S
Sbjct: 484 LPKNGIRPTSQAPKSVYSISVNGQTVKIS 512
>RGD|1310123 [details] [associations]
symbol:Taf6l "TAF6-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0030914 "STAGA
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=ISO]
InterPro:IPR004823 InterPro:IPR009072 InterPro:IPR011442
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 RGD:1310123 GO:GO:0005634
GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0051090
IPI:IPI00390765 Ensembl:ENSRNOT00000037327 UCSC:RGD:1310123
ArrayExpress:D4ABK5 Uniprot:D4ABK5
Length = 591
Score = 218 (81.8 bits), Expect = 5.8e-15, P = 5.8e-15
Identities = 61/204 (29%), Positives = 100/204 (49%)
Query: 104 LFALMRVARSLLRNPHIHIEPYLHQMMPSVITCLVSKRLG--NRFSDNHWDLRNFVADLI 161
L L++VARSL+RNPH+ + PY+ ++ SV+ C++ N +D HW LR+ A L+
Sbjct: 188 LHRLLQVARSLIRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGAALLL 246
Query: 162 ASICTRFGHVYQNLQSRVTRTLLHAFLDPTKSLSQHYGAIQGLAALGPSVVHLLILPNLE 221
+ I G + L ++ +L DP + L HYGA+ GL ALG V ++ P+L
Sbjct: 247 SHIFWTHGDLVSGLYQQILLSLQKVLTDPVRPLCSHYGAVVGLHALGWKAVERVLYPHLP 306
Query: 222 LYLKFLEPEMLLEKQKNEMKRHEAWRVYGALQCAAGLCVYDRLKTVLLRPPKQSRWESNR 281
Y L+ + N + + +VYGA+ L +RL + + + +R
Sbjct: 307 TYWTNLQAVLDDYSVSNAQVKADGHKVYGAI-----LVAVERLLKMKAQAAEPNRGGLGG 361
Query: 282 KGMIVFPSKRKASMDNLMLQ--PP 303
+G + D+L+LQ PP
Sbjct: 362 RG---YRPAEDLPWDSLLLQESPP 382
>WB|WBGene00006387 [details] [associations]
symbol:taf-6.1 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0051090 "regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
GO:GO:0005634 GO:GO:0006352 Gene3D:1.10.20.10 GO:GO:0051090
eggNOG:COG5095 KO:K03131 GeneTree:ENSGT00640000091486 EMBL:FO081732
RefSeq:NP_493919.1 ProteinModelPortal:Q9GZI6 SMR:Q9GZI6
IntAct:Q9GZI6 STRING:Q9GZI6 PaxDb:Q9GZI6 EnsemblMetazoa:W09B6.2
GeneID:173498 KEGG:cel:CELE_W09B6.2 UCSC:W09B6.2 CTD:173498
WormBase:W09B6.2 InParanoid:Q9GZI6 OMA:IIYAGRV NextBio:879913
Uniprot:Q9GZI6
Length = 470
Score = 152 (58.6 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 46/168 (27%), Positives = 81/168 (48%)
Query: 41 VLSKELQLYFDKIRELTVSRSNSTVFKQALLSLAMDSGLHPLVPYFTYFISEEVTRSLKN 100
+L+ E Q++ I + + + + +AL +L D+GL +P+ T I + ++ ++
Sbjct: 225 ILTVEQQIFMKDIITVCMGQDDKKRH-EALYTLETDAGLQVFLPHLTERICKSISANISQ 283
Query: 101 --FSLLFALMRVARSLLRNPHIHIEPYLHQMMPSVITCLVSKRLGNR-FSDNHWDLRNFV 157
SL+ RV RSL N + LH ++P++++C V + + R +DNHW LR+F
Sbjct: 284 RCLSLIIYAGRVLRSLSHNKACDMTVTLHHVLPALLSCCVGRNMCLRPETDNHWALRDFS 343
Query: 158 ADLIASICTRFGHVYQNLQSRVTRTLL---HA-FLDPTKSLSQHYGAI 201
A + + V ++ R R L H F D S S YG +
Sbjct: 344 AKTLVGLVR--DQVDKHDAGRTARRLFDFSHRIFRDTGSSFSMIYGTV 389
>WB|WBGene00021363 [details] [associations]
symbol:taf-6.2 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0051090 "regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
InterPro:IPR011442 Pfam:PF07571 GO:GO:0005634 GO:GO:0009792
GO:GO:0000003 GO:GO:0051090 eggNOG:COG5095
GeneTree:ENSGT00640000091486 EMBL:FO080976 RefSeq:NP_500397.1
ProteinModelPortal:Q965Y0 SMR:Q965Y0 STRING:Q965Y0 PaxDb:Q965Y0
EnsemblMetazoa:Y37E11AL.8 GeneID:177129 KEGG:cel:CELE_Y37E11AL.8
UCSC:Y37E11AL.8 CTD:177129 WormBase:Y37E11AL.8 HOGENOM:HOG000018550
InParanoid:Q965Y0 OMA:EMSRGRF NextBio:895468 Uniprot:Q965Y0
Length = 814
Score = 130 (50.8 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 32/102 (31%), Positives = 60/102 (58%)
Query: 43 SKELQLYFDKIRELTVSRSNSTVFKQALLSLAMDSGLHPLVPYFTYFISEEVTRSL--KN 100
S E Q+ + +I ++ S S S ++ L ++ D+G+ L F I+E + +N
Sbjct: 270 SMEHQVLYSEITKILTSGS-SLQRQKVLETIETDTGIQFLAGRFVILIAEGTRLHIGTRN 328
Query: 101 FSLLFALMRVARSLLRNPHIHIEPYLHQMMPSVITCLVSKRL 142
L L+++ SL++NP+I +E YL+ ++PS+I+C+VSK +
Sbjct: 329 IRGLANLLKLTWSLMKNPNIRLEKYLYVLVPSLISCVVSKNM 370
Score = 60 (26.2 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 18/72 (25%), Positives = 37/72 (51%)
Query: 153 LRNFVADLIASICTRFGHVYQNLQSRVTRTLLHAFLDPTKSLSQHYGAIQGLAALGPSVV 212
LR L+A + +++ ++ NL R+ +TL L + + YG + L A G +
Sbjct: 416 LREASGKLLAELSSQYQNL--NLNVRIIQTL-RGVLSGNQDPAAIYGVLCTLFAFGNLTI 472
Query: 213 HLLILPNL-ELY 223
+ ++LP + ++Y
Sbjct: 473 NSVVLPKMHDIY 484
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.136 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 408 408 0.00079 118 3 11 22 0.48 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 28
No. of states in DFA: 611 (65 KB)
Total size of DFA: 245 KB (2132 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 36.11u 0.08s 36.19t Elapsed: 00:00:01
Total cpu time: 36.11u 0.08s 36.19t Elapsed: 00:00:01
Start: Fri May 10 22:09:05 2013 End: Fri May 10 22:09:06 2013