Query 015386
Match_columns 408
No_of_seqs 133 out of 1032
Neff 7.3
Searched_HMMs 13730
Date Mon Mar 25 11:43:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015386.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/015386hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1zaka2 g.41.2.1 (A:128-158) M 46.8 4.2 0.00031 23.6 1.5 15 90-104 3-17 (31)
2 d1qksa2 b.70.2.1 (A:136-567) C 22.7 34 0.0025 30.9 4.4 33 351-385 381-413 (432)
3 d2ap1a2 c.55.1.10 (A:1-117) Pu 21.2 67 0.0049 22.8 5.2 32 98-130 1-32 (117)
4 d1hzua2 b.70.2.1 (A:118-543) C 16.9 48 0.0035 29.3 4.0 33 351-385 375-407 (426)
5 d1k91a_ b.104.1.1 (A:) Calreti 13.7 38 0.0028 20.1 1.5 11 332-342 1-11 (37)
6 d2aa4a1 c.55.1.10 (A:1-119) N- 11.5 1.2E+02 0.0086 21.5 4.3 32 99-130 2-33 (119)
7 d1z6ra2 c.55.1.10 (A:82-210) M 11.2 1.5E+02 0.011 21.1 4.9 34 97-130 3-36 (129)
8 d1m7ja2 b.92.1.6 (A:420-480) N 11.1 18 0.0013 23.9 -0.8 35 363-399 7-41 (61)
9 d2mysa1 b.34.3.1 (A:34-79) Myo 9.4 89 0.0065 19.3 2.3 22 335-363 5-26 (46)
10 d2hoea3 c.55.1.10 (A:72-199) N 8.5 2.6E+02 0.019 19.6 5.4 32 99-130 5-36 (128)
No 1
>d1zaka2 g.41.2.1 (A:128-158) Microbial and mitochondrial ADK, insert "zinc finger" domain {Maize (Zea mays) [TaxId: 4577]}
Probab=46.76 E-value=4.2 Score=23.58 Aligned_cols=15 Identities=27% Similarity=0.844 Sum_probs=11.9
Q ss_pred eecCCCCcEEEEEec
Q 015386 90 KIDPYTDEMFTFGYT 104 (408)
Q Consensus 90 ~~Dp~tGel~~fg~~ 104 (408)
+.||.||++|-.-+.
T Consensus 3 R~DP~TG~iYH~~f~ 17 (31)
T d1zaka2 3 RLDPVTGKIYHLKYS 17 (31)
T ss_dssp EECTTTCCEEESSSS
T ss_pred cCCCCCCcEeEEecC
Confidence 579999999976553
No 2
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}
Probab=22.72 E-value=34 Score=30.86 Aligned_cols=33 Identities=30% Similarity=0.338 Sum_probs=25.8
Q ss_pred EEEEEEEeCCCCeeEEEEEeCCCCCCCceEEEEcC
Q 015386 351 YLIFHVHDENTGKSAVYVIDAKTMSADPVAVIELP 385 (408)
Q Consensus 351 ~LL~~v~d~~~~~s~L~IlDA~~l~~gpVAri~Lp 385 (408)
+|++.++...+..+.++|+|+++++ ..+++.-|
T Consensus 381 ~v~~S~~~~~~~~g~i~i~D~~T~k--~~~~i~~~ 413 (432)
T d1qksa2 381 EVWFSVWNGKDQESALVVVDDKTLE--LKHVIKDE 413 (432)
T ss_dssp EEEEEEECCTTSCCEEEEEETTTTE--EEEEECCT
T ss_pred EEEEEEecCCCCCCcEEEEECCCce--EEeEecCC
Confidence 6777777766777899999999886 67777664
No 3
>d2ap1a2 c.55.1.10 (A:1-117) Putative regulator protein YcfX {Salmonella typhimurium [TaxId: 90371]}
Probab=21.17 E-value=67 Score=22.82 Aligned_cols=32 Identities=9% Similarity=0.229 Sum_probs=25.0
Q ss_pred EEEEEecCCCCeEEEEEEcCCCCeeeeEEEeeC
Q 015386 98 MFTFGYTQTPPYVTYRVISKDGFMHDPVPITMS 130 (408)
Q Consensus 98 l~~fg~~~~~~~~~~~~~d~~g~~~~~~~~~~p 130 (408)
|| +|++.+...+.+-.+|.+|++..+..++.|
T Consensus 1 My-iGiDiGgT~i~~~l~d~~g~i~~~~~~~t~ 32 (117)
T d2ap1a2 1 MY-YGFDIGGTKIALGVFDSTRRLQWEKRVPTP 32 (117)
T ss_dssp EE-EEEEECSSEEEEEEEETTCCEEEEEEEECC
T ss_pred CE-EEEEECcceEEEEEEeCCCCEEEEEEEeec
Confidence 44 788888888999999999998876655433
No 4
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=16.88 E-value=48 Score=29.26 Aligned_cols=33 Identities=33% Similarity=0.447 Sum_probs=25.3
Q ss_pred EEEEEEEeCCCCeeEEEEEeCCCCCCCceEEEEcC
Q 015386 351 YLIFHVHDENTGKSAVYVIDAKTMSADPVAVIELP 385 (408)
Q Consensus 351 ~LL~~v~d~~~~~s~L~IlDA~~l~~gpVAri~Lp 385 (408)
+|++.++......+.+.|+|++++. +++++.-+
T Consensus 375 ~i~vs~~~~~~~~~~i~v~D~~T~k--~~~~i~~~ 407 (426)
T d1hzua2 375 EVWFSVWNGKNDSSALVVVDDKTLK--LKAVVKDP 407 (426)
T ss_dssp EEEEEECCCTTSCCEEEEEETTTTE--EEEEECCT
T ss_pred EEEEEEecCCCCCCeEEEEECCCCe--EEEEECCC
Confidence 6777777666677889999999886 67777644
No 5
>d1k91a_ b.104.1.1 (A:) Calreticulin {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=13.71 E-value=38 Score=20.14 Aligned_cols=11 Identities=9% Similarity=0.311 Sum_probs=9.3
Q ss_pred cceEEeeCCCC
Q 015386 332 SEAVFVPREPS 342 (408)
Q Consensus 332 ~EPvFVPrp~~ 342 (408)
|||-|||.|.+
T Consensus 1 ~eP~~IpDp~A 11 (37)
T d1k91a_ 1 GKPEHIPDPDA 11 (37)
T ss_dssp CCCSEEECSSC
T ss_pred CCccccCCCCC
Confidence 69999999864
No 6
>d2aa4a1 c.55.1.10 (A:1-119) N-acetylmannosamine kinase NanK {Escherichia coli [TaxId: 562]}
Probab=11.50 E-value=1.2e+02 Score=21.52 Aligned_cols=32 Identities=16% Similarity=0.176 Sum_probs=24.7
Q ss_pred EEEEecCCCCeEEEEEEcCCCCeeeeEEEeeC
Q 015386 99 FTFGYTQTPPYVTYRVISKDGFMHDPVPITMS 130 (408)
Q Consensus 99 ~~fg~~~~~~~~~~~~~d~~g~~~~~~~~~~p 130 (408)
...|++.+...+.+..+|.+|++..+..++.+
T Consensus 2 ~~lgiDiGgT~i~~~l~d~~G~i~~~~~~~~~ 33 (119)
T d2aa4a1 2 TTLAIDIGGTKLAAALIGADGQIRDRRELPTP 33 (119)
T ss_dssp CEEEEEECSSEEEEEEECTTCCEEEEEEEECC
T ss_pred eEEEEEeCcCEEEEEEEcCCCCEEEeEEEecc
Confidence 34677888888999999999998876655443
No 7
>d1z6ra2 c.55.1.10 (A:82-210) Mlc protein {Escherichia coli [TaxId: 562]}
Probab=11.21 E-value=1.5e+02 Score=21.07 Aligned_cols=34 Identities=0% Similarity=-0.124 Sum_probs=26.6
Q ss_pred cEEEEEecCCCCeEEEEEEcCCCCeeeeEEEeeC
Q 015386 97 EMFTFGYTQTPPYVTYRVISKDGFMHDPVPITMS 130 (408)
Q Consensus 97 el~~fg~~~~~~~~~~~~~d~~g~~~~~~~~~~p 130 (408)
.++..|++.+...+.+...|.+|++..+..++++
T Consensus 3 ~~~~l~i~i~~~~i~~~l~Dl~G~~l~~~~~~~~ 36 (129)
T d1z6ra2 3 AWHYLSLRISRGEIFLALRDLSSKLVVEESQELA 36 (129)
T ss_dssp TCEEEEEEEETTEEEEEEEETTCCEEEEEEEECC
T ss_pred ceEEEEEEECCCEEEEEEEcCCCCEEEEEEeecc
Confidence 4566777777888999999999999877655554
No 8
>d1m7ja2 b.92.1.6 (A:420-480) N-acyl-D-aminoacid amidohydrolase {Alcaligenes faecalis [TaxId: 511]}
Probab=11.11 E-value=18 Score=23.89 Aligned_cols=35 Identities=23% Similarity=0.433 Sum_probs=26.0
Q ss_pred eeEEEEEeCCCCCCCceEEEEcCCcCCCCCCccccCh
Q 015386 363 KSAVYVIDAKTMSADPVAVIELPHRVPYGFHGIFLSE 399 (408)
Q Consensus 363 ~s~L~IlDA~~l~~gpVAri~Lp~~vP~gfHG~w~p~ 399 (408)
..+|+|||..++.. -|..+-|...+-|++..|+..
T Consensus 7 ~ADlvvfDp~~i~d--~~~~~~~~~~~~Gi~~v~VnG 41 (61)
T d1m7ja2 7 YADLVVFDPATVAD--SATFEHPTERAAGIHSVYVNG 41 (61)
T ss_dssp BCCEEEECTTTCBC--CCCSSSTTCCCBSEEEEEETT
T ss_pred CCCEEEECHHHccC--cccccccccccceeEEEEECC
Confidence 34799999998863 466667777888887777754
No 9
>d2mysa1 b.34.3.1 (A:34-79) Myosin S1 fragment, N-terminal domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=9.36 E-value=89 Score=19.28 Aligned_cols=22 Identities=23% Similarity=0.437 Sum_probs=16.0
Q ss_pred EEeeCCCCCCCCCCCcEEEEEEEeCCCCe
Q 015386 335 VFVPREPSSTSEEDDGYLIFHVHDENTGK 363 (408)
Q Consensus 335 vFVPrp~~~~~~EDDG~LL~~v~d~~~~~ 363 (408)
+|||.+ -+||+-+.+-....+.
T Consensus 5 vwVpD~-------ke~yv~~~Iks~~Gdk 26 (46)
T d2mysa1 5 VFVVHP-------KQSFVKGTIQSKEGGK 26 (46)
T ss_dssp EEEECS-------SSSEEEEEEEEECSSE
T ss_pred EEcccC-------cccEEEEEEEEccCCE
Confidence 688874 6789998888655443
No 10
>d2hoea3 c.55.1.10 (A:72-199) N-acetylglucosamine kinase {Thermotoga maritima [TaxId: 2336]}
Probab=8.51 E-value=2.6e+02 Score=19.58 Aligned_cols=32 Identities=9% Similarity=0.079 Sum_probs=25.3
Q ss_pred EEEEecCCCCeEEEEEEcCCCCeeeeEEEeeC
Q 015386 99 FTFGYTQTPPYVTYRVISKDGFMHDPVPITMS 130 (408)
Q Consensus 99 ~~fg~~~~~~~~~~~~~d~~g~~~~~~~~~~p 130 (408)
|.+|++.+...+.+..+|.+|++..+..++++
T Consensus 5 ~~igidig~~~i~~~l~d~~G~il~~~~~~~~ 36 (128)
T d2hoea3 5 YVLGIEVTRDEIAACLIDASMNILAHEAHPLP 36 (128)
T ss_dssp EEEEEEECSSEEEEEEEETTCCEEEEEEEECC
T ss_pred EEEEEEECCCEEEEEEEcCCCCEEEEEEEecc
Confidence 56788888888999999999999876655543
Done!