Query 015391
Match_columns 408
No_of_seqs 319 out of 1715
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 11:48:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015391.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015391hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1d2t_A Acid phosphatase; all a 99.8 4.2E-20 1.4E-24 172.4 11.0 161 44-218 42-209 (231)
2 2ipb_A PHON protein, class A n 99.8 9.4E-20 3.2E-24 169.9 12.4 162 44-218 30-197 (230)
3 1qi9_A Protein (vanadium bromo 99.4 7.5E-13 2.6E-17 135.8 8.6 110 108-217 377-505 (556)
4 1up8_A Vanadium-dependent brom 99.0 9.2E-10 3.1E-14 113.1 10.9 81 137-217 477-572 (598)
5 3bb0_A Vanadium chloroperoxida 98.9 3.4E-09 1.1E-13 110.2 9.0 106 106-213 347-511 (609)
6 2lx0_A Membrane fusion protein 13.9 2.1E+02 0.0072 16.6 3.5 15 197-211 2-16 (32)
7 1z65_A PRPLP, prion-like prote 13.6 1.2E+02 0.0041 17.9 2.0 17 1-17 1-17 (30)
8 2k9j_B Integrin beta-3; transm 13.3 1.3E+02 0.0045 19.4 2.5 17 304-320 20-36 (43)
9 2knc_B Integrin beta-3; transm 8.5 1.8E+02 0.0063 21.3 2.2 15 304-318 21-35 (79)
10 1s4x_A Integrin beta-3; cell a 7.6 79 0.0027 22.7 -0.3 14 305-318 10-23 (67)
No 1
>1d2t_A Acid phosphatase; all alpha, hydrolase; 1.90A {Escherichia blattae} SCOP: a.111.1.1 PDB: 1eoi_A 1iw8_A
Probab=99.81 E-value=4.2e-20 Score=172.41 Aligned_cols=161 Identities=16% Similarity=-0.044 Sum_probs=107.0
Q ss_pred hhcCHHHHHHHHhh-cchhHHHHHHHHHhhhhHHHHHHHHHHHHHhcchH--H-HHHHHHHHHH-HH-HHHHHHHhccCC
Q 015391 44 VIIGTAFILQIQKY-QHKFLDSLFSGLSCVVSVPFYTGFLPLVFWSGHVK--L-ARHMTLLMAF-CD-YLGNTIKDTVSA 117 (408)
Q Consensus 44 ~~~d~~i~~~lq~~-~~~~ld~~f~~~s~lG~~~f~i~~l~~~~w~~~~~--~-~~~l~~~~~~-~~-~l~~~lK~~~~~ 117 (408)
.+.|.+++.++|+. .++.++..+...+..|+..++.+.. .+.|...++ . ...++..... +. .+++.+|..++|
T Consensus 42 ~~~D~~~~~~i~~~~~~~~~~~a~~~~t~~~~~~~~~~~~-~l~~~~~~~~~~~~~~ll~~~~~~a~~~~~~~lK~~~~r 120 (231)
T 1d2t_A 42 FLNDQAMYEQGRLLRNTERGKLAAEDANLSSGGVANAFSG-AFGSPITEKDAPALHKLLTNMIEDAGDLATRSAKDHYMR 120 (231)
T ss_dssp HHHHHHHHHHHHHHTTSHHHHHHHHHHHCCHHHHHHHTHH-HHTSCCSTTTCHHHHHHHHHTHHHHHTTTTHHHHHHHCC
T ss_pred HHHHHHHHHHHhccCCHHHHHHHHHhhccCchhHHHHHHH-HHccccChhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 34699999999987 5788899888888888754433322 223332221 1 1222222222 22 688999999999
Q ss_pred CCCCCCC-CcccccccccccccCCCCCCchhHHHHHHHHHHHHHHHHhhccCchhhHHHHHHHHHHHHHHHHHHHHHhcc
Q 015391 118 PRPSCPP-VRRVTATKDEKENALEYGLPSSHTLNTVCLAGYLLHYVLSYSQNNYAVTQFAGVALLCLLVGLIAVGRIYLG 196 (408)
Q Consensus 118 pRP~~~p-~~~i~~~~~~~~~~~~ysfPSgHa~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~SRiYlG 196 (408)
|||.... ....+.. .+..+..++||||||++.+++++.++..+..+ + . .....++..+++||+|+|
T Consensus 121 ~RP~~~~~~~~~~p~-~~~~~~~~~SFPSGHa~~a~a~a~~l~~~~~~----~----~----~~~~~~a~~v~~SRvylG 187 (231)
T 1d2t_A 121 IRPFAFYGVSTCNTT-EQDKLSKNGSYPSGHTSIGWATALVLAEINPQ----R----Q----NEILKRGYELGQSRVICG 187 (231)
T ss_dssp CCHHHHHTCCCSCC---CCCCCSSCCSSCHHHHHHHHHHHHHHHHCGG----G----H----HHHHHHHHHHHHHHHHHT
T ss_pred CCcCccCCCCceecC-CcCCCCCCCCCChHHHHHHHHHHHHHHHHHHH----H----H----HHHHHHHHHHHHHHHhcC
Confidence 9997421 1111100 01115678999999999999998776644321 1 1 123456788999999999
Q ss_pred ccChhHHHHHHHHHHHHHHHHH
Q 015391 197 MHSLVDIIAGLALGLAVLAFWL 218 (408)
Q Consensus 197 ~H~~sDVl~G~llG~~~~~~~~ 218 (408)
+||++||++|+++|..++....
T Consensus 188 vH~psDVlaG~~lG~~~~~~~~ 209 (231)
T 1d2t_A 188 YHWQSDVDAARVVGSAVVATLH 209 (231)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999886654
No 2
>2ipb_A PHON protein, class A nonspecific acid phosphatase PHON; class-A bacterial non-specific acid phosphatase; 2.23A {Salmonella typhimurium} PDB: 2a96_A 2akc_A
Probab=99.81 E-value=9.4e-20 Score=169.93 Aligned_cols=162 Identities=16% Similarity=0.000 Sum_probs=105.3
Q ss_pred hhcCHHHHHHHHhhcchhHHHHHHHHHhhhhHHHHHHHHHHHHH---hcchHHHHHHHHHHHH-HH-HHHHHHHhccCCC
Q 015391 44 VIIGTAFILQIQKYQHKFLDSLFSGLSCVVSVPFYTGFLPLVFW---SGHVKLARHMTLLMAF-CD-YLGNTIKDTVSAP 118 (408)
Q Consensus 44 ~~~d~~i~~~lq~~~~~~ld~~f~~~s~lG~~~f~i~~l~~~~w---~~~~~~~~~l~~~~~~-~~-~l~~~lK~~~~~p 118 (408)
...|.++..++|+.+++.....+.....++.+.....+...+-+ ..+......++..... +. .+++.+|..++||
T Consensus 30 ~~~D~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~ll~~~~~~a~~~~~~~lK~~~~r~ 109 (230)
T 2ipb_A 30 FRYDKEAYFKGYAIKGSPRWKQAAEDADISVENIARIFSPVVGAKINPKDTPETWNMLQNLLKMGGYYATASAKKYYMRT 109 (230)
T ss_dssp HHHHHHHHHHHHTTTTSHHHHHHHHHHCCSHHHHHHHHHHHHTBCCSTTTCHHHHHHHHHHHHHHHTTTTHHHHHHHCCC
T ss_pred HHHHHHHHHHHHhccChHHHHHHHHHHhcCcchHHHHHHHHhCCcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 34689999999998888766666666666655433333333322 2222222233332222 23 7899999999999
Q ss_pred CCCCCC-CcccccccccccccCCCCCCchhHHHHHHHHHHHHHHHHhhccCchhhHHHHHHHHHHHHHHHHHHHHHhccc
Q 015391 119 RPSCPP-VRRVTATKDEKENALEYGLPSSHTLNTVCLAGYLLHYVLSYSQNNYAVTQFAGVALLCLLVGLIAVGRIYLGM 197 (408)
Q Consensus 119 RP~~~p-~~~i~~~~~~~~~~~~ysfPSgHa~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~SRiYlG~ 197 (408)
||.... ...... ..+.....++||||||++++++++.++..+..+ + .. ....++..+++||+|+|+
T Consensus 110 RP~~~~~~~~~~~-~~~~~~~~~~SFPSGHa~~a~a~a~~l~~~~~~----~---~~-----~~~~~a~~v~~SRv~~G~ 176 (230)
T 2ipb_A 110 RPFVLFNHSTCRP-EDENTLRKDGSYPSGHDAYSTLLALVLSQARPE----R---AQ-----ELARRGWEFGQSRVICGA 176 (230)
T ss_dssp CHHHHTTCCCSCG-GGHHHHHTSCCSSCHHHHHHHHHHHHHHHHCGG----G---HH-----HHHHHHHHHHHHHHHHTS
T ss_pred CcCccCCCCeecc-CcccCCCCCCCcChHHHHHHHHHHHHHHHHHHH----H---HH-----HHHHHHHHHHHHHHhcCc
Confidence 997422 111110 000114578999999999999988766543321 1 11 124567889999999999
Q ss_pred cChhHHHHHHHHHHHHHHHHH
Q 015391 198 HSLVDIIAGLALGLAVLAFWL 218 (408)
Q Consensus 198 H~~sDVl~G~llG~~~~~~~~ 218 (408)
||++||++|+++|.+++...+
T Consensus 177 H~~sDVlaG~~lG~~~~~~~~ 197 (230)
T 2ipb_A 177 HWQSDVDAGRYVGAVEFARLQ 197 (230)
T ss_dssp SCHHHHHHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999876654
No 3
>1qi9_A Protein (vanadium bromoperoxidase); haloperoxidase, oxidoreductase; 2.05A {Ascophyllum nodosum} SCOP: a.111.1.2
Probab=99.37 E-value=7.5e-13 Score=135.77 Aligned_cols=110 Identities=19% Similarity=0.168 Sum_probs=71.0
Q ss_pred HHHHHhccCCCCCCCC--CCcccccccccccccCCCCCCchhHHHHHHHHHHHHHHHHhh-----ccCc-----hhhHH-
Q 015391 108 GNTIKDTVSAPRPSCP--PVRRVTATKDEKENALEYGLPSSHTLNTVCLAGYLLHYVLSY-----SQNN-----YAVTQ- 174 (408)
Q Consensus 108 ~~~lK~~~~~pRP~~~--p~~~i~~~~~~~~~~~~ysfPSgHa~~a~~~~~~l~~~~~~~-----~~~~-----~~~~~- 174 (408)
.+++|.++.||||..+ ....+........+..++|||||||+.+++++..+..++... .+.+ ....+
T Consensus 377 ~~lLK~l~~RpRP~~~~~~~~~Ll~~~~~~~tp~~~SFPSGHAt~A~A~A~vL~~l~g~~~~~~~~~~r~~~~~~G~~r~ 456 (556)
T 1qi9_A 377 AELLKRVAAINAAQNPNNEVTYLLPQAIQEGSPTHPSYPSGHATQNGAFATVLKALIGLDRGGDCYPDPVYPDDDGLKLI 456 (556)
T ss_dssp HHHHHHHHHHHHHHSGGGCCCCCCCBSSTTCSCSSCCSSCHHHHHHHHHHHHHHHHHCHHHHTSBCSSCEEECTTSSSEE
T ss_pred hhHHHhhhccCCCCCCccccceeeecccccCCCCCCCCChHHHHHHHHHHHHHHHHHhcccccccccccccccccccccc
Confidence 3589999999999742 111110000011145789999999999999998877655321 0000 00000
Q ss_pred -----HHHH-HHHHHHHHHHHHHHHhccccChhHHHHHHHHHHHHHHHH
Q 015391 175 -----FAGV-ALLCLLVGLIAVGRIYLGMHSLVDIIAGLALGLAVLAFW 217 (408)
Q Consensus 175 -----~~~~-~~~~~~~~lv~~SRiYlG~H~~sDVl~G~llG~~~~~~~ 217 (408)
.+.. .....++..+++||+|+|+||++||++|+++|..++...
T Consensus 457 ~~~~~~l~~~~~l~~lA~lIg~SRVYlGVHYPSDVlaG~lLG~~va~~v 505 (556)
T 1qi9_A 457 DFRGSCLTFEGEINKLAVNVAFGRQMLGIHYRFDGIQGLLLGETITVRT 505 (556)
T ss_dssp ECCSSCCBHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccceeehhhHHHHHHHHHHHHHHeeCccCHHHHHHHHHHHHHHHHHH
Confidence 0000 113447788999999999999999999999999887654
No 4
>1up8_A Vanadium-dependent bromoperoxidase 1; haloperoxidase, vanadate; 2.20A {Corallina pilulifera} SCOP: a.111.1.2 PDB: 1qhb_A
Probab=99.01 E-value=9.2e-10 Score=113.11 Aligned_cols=81 Identities=22% Similarity=0.167 Sum_probs=56.2
Q ss_pred ccCCCCCCchhHHHHHHHHHHHHHHHHhhccCc----------hhhH-----HHHHHHHHHHHHHHHHHHHHhccccChh
Q 015391 137 NALEYGLPSSHTLNTVCLAGYLLHYVLSYSQNN----------YAVT-----QFAGVALLCLLVGLIAVGRIYLGMHSLV 201 (408)
Q Consensus 137 ~~~~ysfPSgHa~~a~~~~~~l~~~~~~~~~~~----------~~~~-----~~~~~~~~~~~~~lv~~SRiYlG~H~~s 201 (408)
+...+|||||||+.+.+.+..+..++....... .+.. .......+..++..+++||+|+|+||++
T Consensus 477 tP~~pSYPSGHAt~S~A~A~vL~~lf~~~~~~~~~~~~~~~G~~R~~p~~g~~ltv~~sl~~lA~eig~SRVYlGVHypS 556 (598)
T 1up8_A 477 SPFHPSYGSGHAVVAGACVTILKAFFDSGIEIDQVFEVDKDEDKLVKSSFKGTLTVAGELNKLADNIAIGRNMAGVHYFS 556 (598)
T ss_dssp SCSSCSSSCHHHHHHHHHHHHHHHHBTTTCBCSCCEEECSSSSSEEECCCCSCCBHHHHHHHHHHHHHHHHHHHTSCCHH
T ss_pred CCCCCCCChHHHHHHHHHHHHHHHHhccccccccccccccCcccccccccccchhHHHHHHHHHHHHHHHhheeeeecHH
Confidence 446899999999999999888765554321000 0000 0000023456778899999999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 015391 202 DIIAGLALGLAVLAFW 217 (408)
Q Consensus 202 DVl~G~llG~~~~~~~ 217 (408)
||++|+.+|..++...
T Consensus 557 DVlAG~~LG~aVa~~v 572 (598)
T 1up8_A 557 DQFESLLLGEQVAIGI 572 (598)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999876543
No 5
>3bb0_A Vanadium chloroperoxidase; protein phosphate-intermediate complex, phospatase activity, chloride, metal-binding, oxidoreductase, secreted; 1.50A {Curvularia inaequalis} PDB: 1vns_A 1vnc_A 1vni_A 1idq_A 1vne_A 1vnf_A 1idu_A 1vng_A 1vnh_A
Probab=98.87 E-value=3.4e-09 Score=110.17 Aligned_cols=106 Identities=19% Similarity=0.077 Sum_probs=65.5
Q ss_pred HHHHHHHhccCCCCCCC------------CCCccccc----ccccccccCCCCCCchhHHHHHHHHHHHHHHHHh-----
Q 015391 106 YLGNTIKDTVSAPRPSC------------PPVRRVTA----TKDEKENALEYGLPSSHTLNTVCLAGYLLHYVLS----- 164 (408)
Q Consensus 106 ~l~~~lK~~~~~pRP~~------------~p~~~i~~----~~~~~~~~~~ysfPSgHa~~a~~~~~~l~~~~~~----- 164 (408)
..+...|..+.++||.. |....+.. ......+...+|||||||+.+.+.+..+..++..
T Consensus 347 ia~w~~K~~y~R~RP~taI~~~~~~~~~dp~w~~l~~~~~~~~~~~~tP~~pSYPSGHAt~s~A~A~vL~~~f~~~~~~~ 426 (609)
T 3bb0_A 347 IFSWKEKWEFEFWRPLSGVRDDGRPDHGDPFWLTLGAPATNTNDIPFKPPFPAYPSGHATFGGAVFQMVRRYYNGRVGTW 426 (609)
T ss_dssp HHHHHHHHHHCBCCHHHHHHTCCCTTTCCTTCCBCCBCCTTSSSCCBCCSSCCSSCHHHHHHHHHHHHHHHHHBTTTBCC
T ss_pred HHHHHHhhhhcCCCcCchhhcccccccCCccchhhcccccccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHhcccccc
Confidence 34456899999999952 11111000 0000024567999999999999999887765510
Q ss_pred ----hccCchh----------------------------------hHHHHHHHHHHHHHHHHHHHHHhccccChhHHHHH
Q 015391 165 ----YSQNNYA----------------------------------VTQFAGVALLCLLVGLIAVGRIYLGMHSLVDIIAG 206 (408)
Q Consensus 165 ----~~~~~~~----------------------------------~~~~~~~~~~~~~~~lv~~SRiYlG~H~~sDVl~G 206 (408)
..+.... ..+.+ .....++..+++||+|+|+||++|+++|
T Consensus 427 ~~~G~d~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~r~~--~sl~~~A~e~g~SRIY~GVHypsDv~aG 504 (609)
T 3bb0_A 427 KDDEPDNIAIDMMISEELNGVNRDLRQPYDPTAPIEDQPGIVRTRIVRHF--DSAWELMFENAISRIFLGVHWRFDAAAA 504 (609)
T ss_dssp CTTSCCCCCEEEEECTTSSSSCEEESSCCCTTSCGGGSCEEECCCCEEEE--SCHHHHHHHHHHHHHHTTSSCHHHHSCH
T ss_pred cccCccccceeecccccccccccccccccccccccccccccccccchhhH--HHHHHHHHHHhhhhheeeeeCHHHHHHH
Confidence 0000000 00000 0122357789999999999999999999
Q ss_pred HHHHHHH
Q 015391 207 LALGLAV 213 (408)
Q Consensus 207 ~llG~~~ 213 (408)
..+|..+
T Consensus 505 ~~lG~~~ 511 (609)
T 3bb0_A 505 RDILIPT 511 (609)
T ss_dssp HHHBCBC
T ss_pred HHHHHhh
Confidence 9999655
No 6
>2lx0_A Membrane fusion protein P14; membrane fusion protein transmembrane domain, P14 fast prote ARCH, micelle-peptide complex, membrane protein; NMR {Synthetic}
Probab=13.92 E-value=2.1e+02 Score=16.58 Aligned_cols=15 Identities=40% Similarity=0.614 Sum_probs=10.5
Q ss_pred ccChhHHHHHHHHHH
Q 015391 197 MHSLVDIIAGLALGL 211 (408)
Q Consensus 197 ~H~~sDVl~G~llG~ 211 (408)
-|+.-+|++|.+-=.
T Consensus 2 khtiweviaglvall 16 (32)
T 2lx0_A 2 KHTIWEVIAGLVALL 16 (32)
T ss_dssp CSSSHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHH
Confidence 378888888865433
No 7
>1z65_A PRPLP, prion-like protein doppel, doppelganger; transmembrane helix, DHPC, mouse doppel, unknown function; NMR {Synthetic}
Probab=13.62 E-value=1.2e+02 Score=17.94 Aligned_cols=17 Identities=35% Similarity=0.575 Sum_probs=11.3
Q ss_pred CccccchhhHHHHHHHH
Q 015391 1 MESVLAAWQVATLGGIV 17 (408)
Q Consensus 1 ~~~~~~~w~~~~~~~i~ 17 (408)
|++....|+.++++.++
T Consensus 1 MrkhLG~~wlai~c~LL 17 (30)
T 1z65_A 1 MKNRLGTWWVAILCMLL 17 (30)
T ss_dssp CCSSCSSHHHHHHHHHH
T ss_pred CcchhhhhHHHHHHHHH
Confidence 77888888855554443
No 8
>2k9j_B Integrin beta-3; transmembrane complex, cell adhesion, cleavage on basic residues, disease mutation, glycoprotein, pyrrolidone carboxylic acid; NMR {Homo sapiens} PDB: 2rmz_A 2rn0_A 2l91_A
Probab=13.34 E-value=1.3e+02 Score=19.38 Aligned_cols=17 Identities=24% Similarity=0.526 Sum_probs=12.6
Q ss_pred HHHhhhHHHHHHHHHHH
Q 015391 304 RILVGMPTILLVKFCSK 320 (408)
Q Consensus 304 R~~iG~~~v~~~r~~~K 320 (408)
=.++|+.++++||....
T Consensus 20 ivliGl~lLliwk~~~~ 36 (43)
T 2k9j_B 20 ILLIGLAALLIWKLLIT 36 (43)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 35678889999986633
No 9
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=8.51 E-value=1.8e+02 Score=21.30 Aligned_cols=15 Identities=27% Similarity=0.634 Sum_probs=11.6
Q ss_pred HHHhhhHHHHHHHHH
Q 015391 304 RILVGMPTILLVKFC 318 (408)
Q Consensus 304 R~~iG~~~v~~~r~~ 318 (408)
=.++|++++++||.+
T Consensus 21 illiGllllliwk~~ 35 (79)
T 2knc_B 21 ILLIGLAALLIWKLL 35 (79)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 356788889999855
No 10
>1s4x_A Integrin beta-3; cell adhesion; NMR {Homo sapiens} SCOP: j.60.1.1 PDB: 2ljd_A* 2lje_A* 2ljf_A*
Probab=7.56 E-value=79 Score=22.67 Aligned_cols=14 Identities=14% Similarity=-0.135 Sum_probs=1.9
Q ss_pred HHhhhHHHHHHHHH
Q 015391 305 ILVGMPTILLVKFC 318 (408)
Q Consensus 305 ~~iG~~~v~~~r~~ 318 (408)
-++|++++++||.+
T Consensus 10 ~liGl~lLliwKll 23 (67)
T 1s4x_A 10 SSGLVPRGSHMKLL 23 (67)
T ss_dssp -----------CHH
T ss_pred hHHHHHHHHHHHHH
Confidence 57899999999855
Done!