BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>015393
MRTKRGLCYPRVVDVCLGQRVVPVNDKKRRGFSSGEPKTTYRKKARFSPDVAGKSDLFDA
LPDDLVVSILCKLSSTARCPSDFVNVLITCKRMNGLALNSLVLSKASKKTFAIKANNWSE
SAHRFLKLCADAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAISSHAQALYSLAVIQFN
GSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNIAEGRRFLVQANAR
ELAAVLSSAACQGISTRSWLTWNPLSQPHPAPHPRNQNPNHNGHVTGIGCPLLSDFGCNV
PAPEAHPASRFLAEWFAARGGTPGPGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRA
CQALDWKLRHKADCAPAERWLDEEGNGDVDVDLNDAEGGGEDNVVADS

High Scoring Gene Products

Symbol, full name Information P value
AT1G67340 protein from Arabidopsis thaliana 2.6e-141
AT5G50450 protein from Arabidopsis thaliana 1.3e-70
MGG_04327
Uncharacterized protein
protein from Magnaporthe oryzae 70-15 5.5e-05
UBP16
AT4G24560
protein from Arabidopsis thaliana 0.00032
SO_4559
Sel1 domain-containing protein
protein from Shewanella oneidensis MR-1 0.00043
SO_4559
conserved domain protein
protein from Shewanella oneidensis MR-1 0.00043
GSU2395
Uncharacterized protein
protein from Geobacter sulfurreducens PCA 0.00061
GSU_2395
conserved hypothetical protein
protein from Geobacter sulfurreducens PCA 0.00061

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  015393
        (408 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2019604 - symbol:AT1G67340 "AT1G67340" species...  1382  2.6e-141  1
TAIR|locus:2177522 - symbol:AT5G50450 species:3702 "Arabi...   715  1.3e-70   1
ASPGD|ASPL0000075121 - symbol:AN8765 species:162425 "Emer...   132  3.3e-05   1
UNIPROTKB|G4NGF6 - symbol:MGG_04327 "Uncharacterized prot...   132  5.5e-05   1
TAIR|locus:2121959 - symbol:UBP16 "ubiquitin-specific pro...   124  0.00032   1
UNIPROTKB|Q8E8U7 - symbol:SO_4559 "Sel1 domain-containing...   119  0.00043   1
TIGR_CMR|SO_4559 - symbol:SO_4559 "conserved domain prote...   119  0.00043   1
UNIPROTKB|Q74B01 - symbol:GSU2395 "Uncharacterized protei...   111  0.00061   1
TIGR_CMR|GSU_2395 - symbol:GSU_2395 "conserved hypothetic...   111  0.00061   1


>TAIR|locus:2019604 [details] [associations]
            symbol:AT1G67340 "AT1G67340" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008270
            "zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IDA] InterPro:IPR002893 InterPro:IPR011990 Pfam:PF01753
            PROSITE:PS50181 UniPathway:UPA00143 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0008270 GO:GO:0016567
            Gene3D:1.25.40.10 InterPro:IPR006597 Pfam:PF08238 EMBL:AC002130
            eggNOG:NOG317292 HOGENOM:HOG000238617 ProtClustDB:CLSN2687031
            EMBL:AY057623 EMBL:AY093102 EMBL:BT000146 IPI:IPI00541988
            PIR:H96696 RefSeq:NP_564894.1 UniGene:At.25264
            ProteinModelPortal:Q9FYF9 SMR:Q9FYF9 IntAct:Q9FYF9 STRING:Q9FYF9
            PaxDb:Q9FYF9 PRIDE:Q9FYF9 EnsemblPlants:AT1G67340.1 GeneID:843055
            KEGG:ath:AT1G67340 TAIR:At1g67340 InParanoid:Q9FYF9 OMA:LCADAGN
            PhylomeDB:Q9FYF9 Genevestigator:Q9FYF9 Uniprot:Q9FYF9
        Length = 379

 Score = 1382 (491.5 bits), Expect = 2.6e-141, P = 2.6e-141
 Identities = 267/358 (74%), Positives = 298/358 (83%)

Query:    49 PDVAGKSDLFDALPDDLVVSILCKLSSTARCPSDFVNVLITCKRMNGLALNSLVLSKASK 108
             P+    +DL D++PDDLV+SILCKL ST+RCP+DF+NVL+TCKR+ GLA+N +VLS+ S 
Sbjct:    35 PENTTGADLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSP 94

Query:   109 KTFAIKANNWSESAHRFLKLCADAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAISSHA 168
             K  A+KA+NWSE +HRFLK C DAG++EACYTLGMIRFYCLQNRG+GASLMAKAAISSHA
Sbjct:    95 KAIAVKAHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSHA 154

Query:   169 QALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNIA 228
              ALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGH+DALRELGHCLQDGYGV QN++
Sbjct:   155 PALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQNVS 214

Query:   229 EGRRFLVQANARELAAVLSSAACQGISTRSWLTWNPLSQPHPAPHPRNQNPNHNGHVTGI 288
             EGRRFLVQANARELAAVLSS    GI  RS  TW  LSQP P P      PNH G  T  
Sbjct:   215 EGRRFLVQANARELAAVLSS----GIQARS--TWLSLSQP-PPPVV----PNH-GQQT-- 260

Query:   289 GCPLLSDFGCNVPAPEAHPASRFLAEWFAARGGT-PGPGLRLCSHVGCGRPETRRHEFRR 347
              CPLLSDFGCNVPAPE HPA+RFLA+WFA RGG  PG GLRLCSH GCGRPETR+HEFRR
Sbjct:   261 -CPLLSDFGCNVPAPETHPANRFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRR 319

Query:   348 CSVCGAVNYCSRACQALDWKLRHKADCAPAERWLDEEGNGDVDVDLNDAEGGGEDNVV 405
             CSVCG VNYCSRACQALDWKLRHK DCAP +RWL+E   G+ +V + D  G G DNV+
Sbjct:   320 CSVCGVVNYCSRACQALDWKLRHKMDCAPVQRWLEEGDGGEGNVQI-DGNGNG-DNVL 375


>TAIR|locus:2177522 [details] [associations]
            symbol:AT5G50450 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
            evidence=IEA] InterPro:IPR002893 InterPro:IPR011990 Pfam:PF01753
            PROSITE:PS01360 PROSITE:PS50181 PROSITE:PS50865 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
            Gene3D:1.25.40.10 InterPro:IPR006597 Pfam:PF08238 EMBL:AB012248
            EMBL:AY099743 EMBL:BT000275 IPI:IPI00524113 RefSeq:NP_199856.1
            UniGene:At.24402 ProteinModelPortal:Q9FK27 SMR:Q9FK27 IntAct:Q9FK27
            EnsemblPlants:AT5G50450.1 GeneID:835113 KEGG:ath:AT5G50450
            TAIR:At5g50450 eggNOG:NOG317292 HOGENOM:HOG000238617
            InParanoid:Q9FK27 OMA:CGKVNYC PhylomeDB:Q9FK27
            ProtClustDB:CLSN2687031 Genevestigator:Q9FK27 Uniprot:Q9FK27
        Length = 336

 Score = 715 (256.8 bits), Expect = 1.3e-70, P = 1.3e-70
 Identities = 151/258 (58%), Positives = 188/258 (72%)

Query:    58 FDALPDDLVVSILCKLSSTARCPSDFVNVLITCKRMNGLALNSLVLSKASKKTFAIKANN 117
             F+ L DDL++SIL KL+++A  PSDF+ VL TCKR+N L L+ LVLSKA  +T A+ A  
Sbjct:    22 FEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHPLVLSKAGTQTLAVTAEK 81

Query:   118 WSESAHRFLKLCADAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAISSHAQALYSLAVI 177
             WS+S+H+FLKLC +AGN++A Y+LGMIRFYCLQN  SGASLMAKAAI SHA ALYSL+VI
Sbjct:    82 WSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMAKAAIKSHAPALYSLSVI 141

Query:   178 QFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNIAEGRRFLVQA 237
             QFNGSGGSK DK+LRAGVALCAR+A+LGH+DALRELGHCLQDGYGV ++++EGRR L+QA
Sbjct:   142 QFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDGYGVPRDVSEGRRLLIQA 201

Query:   238 NARELAAVLSS--AACQGIS--TRSWLTWNPLSQPHPAPHPRNQNPNHNGHVT-GIGCPL 292
             NARELA  L S  +   G    T + L+  P+ + HP      +  + +G V    G  +
Sbjct:   202 NARELACSLRSYLSLKSGDENETLTDLSVVPVQEIHPVNRFLKEWFS-SGRVDLAEGLRM 260

Query:   293 LSDFGCNVPAPEAHPASR 310
              S  GC  P   AH   R
Sbjct:   261 CSHGGCGRPETRAHEFRR 278

 Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
 Identities = 60/111 (54%), Positives = 73/111 (65%)

Query:   293 LSDFGCNVPAPEAHPASRFLAEWFAARGGTPGPGLRLCSHVGCGRPETRRHEFRRCSVCG 352
             L+D    VP  E HP +RFL EWF++       GLR+CSH GCGRPETR HEFRRCSVCG
Sbjct:   225 LTDLSV-VPVQEIHPVNRFLKEWFSSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCG 283

Query:   353 AVNYCSRACQALDWKLRHKADCAPAERWLDEEGN-GD----VDVDLNDAEG 398
              VNYCSR CQALDW+ +HK +C P + W+      GD    V V+++D  G
Sbjct:   284 KVNYCSRGCQALDWRAKHKVECTPLDLWVAAAAEIGDDGEAVAVEIDDNHG 334


>ASPGD|ASPL0000075121 [details] [associations]
            symbol:AN8765 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] InterPro:IPR011990 eggNOG:COG0790 OrthoDB:EOG4W11NX
            Gene3D:1.25.40.10 InterPro:IPR006597 Pfam:PF08238 SMART:SM00671
            EMBL:BN001303 EMBL:AACD01000161 RefSeq:XP_682034.1
            ProteinModelPortal:Q5ASG5 EnsemblFungi:CADANIAT00006300
            GeneID:2868422 KEGG:ani:AN8765.2 HOGENOM:HOG000201917 OMA:QPVTKQP
            Uniprot:Q5ASG5
        Length = 807

 Score = 132 (51.5 bits), Expect = 3.3e-05, P = 3.3e-05
 Identities = 73/253 (28%), Positives = 107/253 (42%)

Query:     6 GLCYPRVVDVCLGQRVVPVNDKKRR-GFSSGEPKTTYRK---KARFSPDVAGKSDLFD-- 59
             G   P V+D       +P +    R G  SG P    R+        P  A      +  
Sbjct:   365 GYVEPEVLDPQQNPDALPHHPMPYRPGHDSGGPPPPVRQYNGAMNSQPQSAPPQGAPEGP 424

Query:    60 ALPDDLVVSILCKLSSTARC-PSDFVNVLITCKRMNGLALNSLVLSKASKKTFAIKANNW 118
             A P+ +  + L +L   AR  PSD    L   +++   ++  +  S+   K+ A     +
Sbjct:   425 APPEPVTHAELERLQQQARGNPSDHKLQLTLAQKLVEASIVLVEASRLDPKSKAKAREKY 484

Query:   119 SESAHRFLKLCADAGNVEA------CYTLGMIRFYCLQNRGSGA-SLMAKAAISSHAQAL 171
             +  AH+ +K    AG  +A      CY  G++    LQN    A SL   AA  +HAQA 
Sbjct:   485 NIDAHKIVKKLVSAGYPDAQFYMADCYGQGLLG---LQNDAKEAFSLYHSAAKQNHAQAA 541

Query:   172 YSLAV---IQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGY-GVRQNI 227
             Y +AV   I     GG+K D   +A V    RAA LG   A+ ++G  L  G  G  +N 
Sbjct:   542 YRVAVCCEIGHEEGGGTKRDP-FKA-VQWYKRAASLGDPPAMYKMGMILLKGLLGQARNP 599

Query:   228 AEGRRFLVQANAR 240
              EG  +L +A  R
Sbjct:   600 REGISWLKRAAER 612


>UNIPROTKB|G4NGF6 [details] [associations]
            symbol:MGG_04327 "Uncharacterized protein" species:242507
            "Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            EMBL:CM001236 RefSeq:XP_003719480.1 ProteinModelPortal:G4NGF6
            EnsemblFungi:MGG_04327T0 GeneID:2677379 KEGG:mgr:MGG_04327
            GO:GO:0046872 GO:GO:0008270 InterPro:IPR002893 Pfam:PF01753
            PROSITE:PS01360 PROSITE:PS50865 Uniprot:G4NGF6
        Length = 1240

 Score = 132 (51.5 bits), Expect = 5.5e-05, P = 5.5e-05
 Identities = 22/44 (50%), Positives = 26/44 (59%)

Query:   335 CGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKADCAPAE 378
             CGRPE  + +  RC  C  V YCS  CQ  DWK RHK +C  A+
Sbjct:  1196 CGRPEGPQQKLNRCKACLEVKYCSVDCQRADWKTRHKRECQTAQ 1239


>TAIR|locus:2121959 [details] [associations]
            symbol:UBP16 "ubiquitin-specific protease 16"
            species:3702 "Arabidopsis thaliana" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISS] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008283 "cell
            proliferation" evidence=IGI] [GO:0009908 "flower development"
            evidence=IGI] [GO:0048364 "root development" evidence=IGI]
            [GO:0048366 "leaf development" evidence=IGI] [GO:0048367 "shoot
            system development" evidence=IGI] [GO:0000956 "nuclear-transcribed
            mRNA catabolic process" evidence=RCA] [GO:0006486 "protein
            glycosylation" evidence=RCA] [GO:0006487 "protein N-linked
            glycosylation" evidence=RCA] InterPro:IPR001394 InterPro:IPR002893
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF01753 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS01360 PROSITE:PS50235 PROSITE:PS50865
            GO:GO:0016021 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
            GO:GO:0008283 GO:GO:0008270 GO:GO:0008234 GO:GO:0048364
            GO:GO:0006511 EMBL:AL035356 GO:GO:0009908 EMBL:AL161561
            GO:GO:0048366 GO:GO:0004221 eggNOG:COG5533 EMBL:AF302666
            IPI:IPI00518628 PIR:T05578 RefSeq:NP_567705.1 UniGene:At.2551
            HSSP:P43593 ProteinModelPortal:Q9SB51 SMR:Q9SB51 MEROPS:C19.A07
            PaxDb:Q9SB51 PRIDE:Q9SB51 EnsemblPlants:AT4G24560.1 GeneID:828558
            KEGG:ath:AT4G24560 TAIR:At4g24560 HOGENOM:HOG000242869
            InParanoid:Q9SB51 KO:K11855 OMA:RCKSYEK PhylomeDB:Q9SB51
            ProtClustDB:CLSN2917604 Genevestigator:Q9SB51 Uniprot:Q9SB51
        Length = 1008

 Score = 124 (48.7 bits), Expect = 0.00032, P = 0.00032
 Identities = 23/52 (44%), Positives = 28/52 (53%)

Query:   347 RCSVCGAVNYCSRACQALDWKLRHKADCAPAERWLDEEGNGDVDVDLNDAEG 398
             RCS C AV YCS  CQ + W+  HK +C PA    D E   D D+ L +  G
Sbjct:    84 RCSRCKAVRYCSGKCQIIHWRQGHKDECHPASIVYDSEDESDSDLRLGEENG 135


>UNIPROTKB|Q8E8U7 [details] [associations]
            symbol:SO_4559 "Sel1 domain-containing protein"
            species:211586 "Shewanella oneidensis MR-1" [GO:0003674
            "molecular_function" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR011990 Gene3D:1.25.40.10
            InterPro:IPR006597 Pfam:PF08238 SMART:SM00671 EMBL:AE014299
            GenomeReviews:AE014299_GR InterPro:IPR025285 Pfam:PF13643
            RefSeq:NP_720076.1 ProteinModelPortal:Q8E8U7 GeneID:1172145
            KEGG:son:SO_4559 PATRIC:23528787 HOGENOM:HOG000001748 OMA:QTEAMAN
            ProtClustDB:CLSK907705 Uniprot:Q8E8U7
        Length = 484

 Score = 119 (46.9 bits), Expect = 0.00043, P = 0.00043
 Identities = 44/141 (31%), Positives = 66/141 (46%)

Query:   122 AHRFLKLCADAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAISSHAQALYSLAVIQFNG 181
             A  FL+L A+    EA   LG++ +Y  Q+       ++KAA + +  A Y LA++  NG
Sbjct:   287 AKHFLQLAAEGEQTEAMANLGVL-YYQTQDLPQAYHFISKAAQAGYPHAQYHLALMLANG 345

Query:   182 SGGSKNDKDLRAGVALCARAAFLGHIDA-LRELGHCLQDGYGVRQNIAEGRRFL--VQAN 238
              G  +   D  A     A AA  G +DA L    H L D  G+  ++++  R+L  V   
Sbjct:   346 DGCQR---DPIASEYWMAEAAEQGQLDAMLTRAQHMLNDESGLGGDVSQAERYLREVIKY 402

Query:   239 ARELAAV--LSSAACQGISTR 257
                + A+  LS A   GI  R
Sbjct:   403 GHSVPAMIELSMALADGILGR 423


>TIGR_CMR|SO_4559 [details] [associations]
            symbol:SO_4559 "conserved domain protein" species:211586
            "Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
            evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
            InterPro:IPR011990 Gene3D:1.25.40.10 InterPro:IPR006597
            Pfam:PF08238 SMART:SM00671 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR025285 Pfam:PF13643 RefSeq:NP_720076.1
            ProteinModelPortal:Q8E8U7 GeneID:1172145 KEGG:son:SO_4559
            PATRIC:23528787 HOGENOM:HOG000001748 OMA:QTEAMAN
            ProtClustDB:CLSK907705 Uniprot:Q8E8U7
        Length = 484

 Score = 119 (46.9 bits), Expect = 0.00043, P = 0.00043
 Identities = 44/141 (31%), Positives = 66/141 (46%)

Query:   122 AHRFLKLCADAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAISSHAQALYSLAVIQFNG 181
             A  FL+L A+    EA   LG++ +Y  Q+       ++KAA + +  A Y LA++  NG
Sbjct:   287 AKHFLQLAAEGEQTEAMANLGVL-YYQTQDLPQAYHFISKAAQAGYPHAQYHLALMLANG 345

Query:   182 SGGSKNDKDLRAGVALCARAAFLGHIDA-LRELGHCLQDGYGVRQNIAEGRRFL--VQAN 238
              G  +   D  A     A AA  G +DA L    H L D  G+  ++++  R+L  V   
Sbjct:   346 DGCQR---DPIASEYWMAEAAEQGQLDAMLTRAQHMLNDESGLGGDVSQAERYLREVIKY 402

Query:   239 ARELAAV--LSSAACQGISTR 257
                + A+  LS A   GI  R
Sbjct:   403 GHSVPAMIELSMALADGILGR 423


>UNIPROTKB|Q74B01 [details] [associations]
            symbol:GSU2395 "Uncharacterized protein" species:243231
            "Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0008150 "biological_process" evidence=ND] InterPro:IPR011990
            EMBL:AE017180 GenomeReviews:AE017180_GR Gene3D:1.25.40.10
            InterPro:IPR006597 Pfam:PF08238 SMART:SM00671 RefSeq:NP_953441.1
            ProteinModelPortal:Q74B01 GeneID:2688012 KEGG:gsu:GSU2395
            PATRIC:22027637 OMA:NRELACK BioCyc:GSUL243231:GH27-2369-MONOMER
            Uniprot:Q74B01
        Length = 213

 Score = 111 (44.1 bits), Expect = 0.00061, P = 0.00061
 Identities = 41/159 (25%), Positives = 69/159 (43%)

Query:    84 VNVLITCKRMNGLALNSLVLSKASKKTFAIKANNWSESAHRFLKLCADAGNVEACYTLGM 143
             + +++ C     + +N       S+     K  N+ ++A   L+     GN++A   LG 
Sbjct:     5 ITLILFCILAQNVTMNYCFADVLSEAYTYFKNKNY-DNALPLLENLVTEGNLDAYNLLGT 63

Query:   144 I--RFYCL-QNRGSGASLMAKAAISSHAQALYSLAVIQFNGSGGSKNDKDLRAGVALCAR 200
             +  + Y + QN      L   AA   HA A Y+L ++  +GSG  +   D    +     
Sbjct:    64 MYKKGYSVPQNPNKAIELYEFAAKKGHAGAQYNLGLMYESGSGILQ---DYSQAIKWYKL 120

Query:   201 AAFLGHIDALRELGHCLQDGYGVRQNIAEGRRFLVQANA 239
             AA      AL  LGH   +G GV++N+ E   +  +A A
Sbjct:   121 AAIQNDSGALNNLGHIYHNGLGVKKNMKEACNYYGKAAA 159


>TIGR_CMR|GSU_2395 [details] [associations]
            symbol:GSU_2395 "conserved hypothetical protein"
            species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR011990 EMBL:AE017180 GenomeReviews:AE017180_GR
            Gene3D:1.25.40.10 InterPro:IPR006597 Pfam:PF08238 SMART:SM00671
            RefSeq:NP_953441.1 ProteinModelPortal:Q74B01 GeneID:2688012
            KEGG:gsu:GSU2395 PATRIC:22027637 OMA:NRELACK
            BioCyc:GSUL243231:GH27-2369-MONOMER Uniprot:Q74B01
        Length = 213

 Score = 111 (44.1 bits), Expect = 0.00061, P = 0.00061
 Identities = 41/159 (25%), Positives = 69/159 (43%)

Query:    84 VNVLITCKRMNGLALNSLVLSKASKKTFAIKANNWSESAHRFLKLCADAGNVEACYTLGM 143
             + +++ C     + +N       S+     K  N+ ++A   L+     GN++A   LG 
Sbjct:     5 ITLILFCILAQNVTMNYCFADVLSEAYTYFKNKNY-DNALPLLENLVTEGNLDAYNLLGT 63

Query:   144 I--RFYCL-QNRGSGASLMAKAAISSHAQALYSLAVIQFNGSGGSKNDKDLRAGVALCAR 200
             +  + Y + QN      L   AA   HA A Y+L ++  +GSG  +   D    +     
Sbjct:    64 MYKKGYSVPQNPNKAIELYEFAAKKGHAGAQYNLGLMYESGSGILQ---DYSQAIKWYKL 120

Query:   201 AAFLGHIDALRELGHCLQDGYGVRQNIAEGRRFLVQANA 239
             AA      AL  LGH   +G GV++N+ E   +  +A A
Sbjct:   121 AAIQNDSGALNNLGHIYHNGLGVKKNMKEACNYYGKAAA 159


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.135   0.429    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      408       408   0.00079  118 3  11 22  0.37    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  9
  No. of states in DFA:  624 (66 KB)
  Total size of DFA:  291 KB (2150 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  33.05u 0.14s 33.19t   Elapsed:  00:00:01
  Total cpu time:  33.05u 0.14s 33.19t   Elapsed:  00:00:01
  Start:  Mon May 20 15:11:08 2013   End:  Mon May 20 15:11:09 2013

Back to top