Query 015396
Match_columns 407
No_of_seqs 389 out of 1465
Neff 10.7
Searched_HMMs 46136
Date Fri Mar 29 05:55:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015396.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015396hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2814 AraJ Arabinose efflux 100.0 1.2E-31 2.5E-36 239.7 27.8 289 37-377 9-299 (394)
2 TIGR02332 HpaX 4-hydroxyphenyl 100.0 3.2E-30 6.9E-35 241.8 27.2 297 38-356 5-311 (412)
3 TIGR00903 2A0129 major facilit 100.0 3.7E-30 8E-35 236.7 27.1 303 53-407 3-316 (368)
4 PRK10406 alpha-ketoglutarate t 100.0 9.5E-30 2.1E-34 240.5 30.1 287 39-364 20-319 (432)
5 COG2271 UhpC Sugar phosphate p 100.0 5.7E-31 1.2E-35 232.1 19.3 306 37-371 25-337 (448)
6 PRK14995 methyl viologen resis 100.0 1.8E-29 3.8E-34 242.3 30.7 306 40-373 5-344 (495)
7 PRK09556 uhpT sugar phosphate 100.0 1E-30 2.2E-35 249.5 21.0 295 43-364 31-334 (467)
8 TIGR01299 synapt_SV2 synaptic 100.0 9.8E-30 2.1E-34 248.9 24.8 191 43-246 169-364 (742)
9 TIGR00891 2A0112 putative sial 100.0 3.9E-29 8.4E-34 234.8 27.4 343 37-406 8-363 (405)
10 PRK12307 putative sialic acid 100.0 2.8E-29 6.1E-34 237.4 26.1 330 38-406 15-356 (426)
11 PRK11551 putative 3-hydroxyphe 100.0 8.3E-29 1.8E-33 232.7 27.9 321 38-406 12-343 (406)
12 PRK03545 putative arabinose tr 100.0 7.7E-29 1.7E-33 231.4 27.4 274 40-367 8-283 (390)
13 PRK10642 proline/glycine betai 100.0 9.6E-29 2.1E-33 237.1 28.7 341 41-406 16-377 (490)
14 TIGR00893 2A0114 d-galactonate 100.0 2.3E-29 5E-34 235.4 23.8 278 50-355 3-282 (399)
15 TIGR00710 efflux_Bcr_CflA drug 100.0 2.9E-28 6.3E-33 227.4 28.4 285 41-373 5-291 (385)
16 PRK10213 nepI ribonucleoside t 100.0 7E-28 1.5E-32 224.7 30.9 266 39-358 18-286 (394)
17 TIGR00711 efflux_EmrB drug res 100.0 3.6E-28 7.7E-33 233.8 29.2 303 42-372 3-339 (485)
18 PRK11663 regulatory protein Uh 100.0 1.1E-28 2.4E-33 233.3 25.2 280 41-351 23-306 (434)
19 TIGR00890 2A0111 Oxalate/Forma 100.0 9.8E-29 2.1E-33 229.7 23.9 313 46-406 8-330 (377)
20 TIGR00900 2A0121 H+ Antiporter 100.0 1.2E-28 2.6E-33 228.1 24.1 288 46-375 4-298 (365)
21 PRK10133 L-fucose transporter; 100.0 6.2E-28 1.4E-32 227.5 28.0 302 39-372 24-343 (438)
22 KOG2615 Permease of the major 100.0 2.5E-29 5.4E-34 217.7 16.6 335 57-406 41-387 (451)
23 PRK10091 MFS transport protein 100.0 9.9E-28 2.2E-32 223.2 26.6 279 41-372 3-283 (382)
24 PRK10504 putative transporter; 100.0 2.9E-27 6.3E-32 226.5 30.0 305 40-373 9-346 (471)
25 PRK15034 nitrate/nitrite trans 100.0 2.4E-27 5.1E-32 219.7 27.7 290 38-369 31-331 (462)
26 PF07690 MFS_1: Major Facilita 100.0 1.2E-27 2.5E-32 220.4 25.2 286 46-372 1-291 (352)
27 PRK09952 shikimate transporter 100.0 3.4E-27 7.4E-32 223.1 28.9 334 40-406 21-378 (438)
28 PRK10473 multidrug efflux syst 100.0 6.4E-27 1.4E-31 218.8 30.3 282 45-375 7-290 (392)
29 PRK15075 citrate-proton sympor 100.0 6E-27 1.3E-31 221.5 30.4 286 39-364 13-314 (434)
30 TIGR00881 2A0104 phosphoglycer 100.0 2.9E-28 6.2E-33 226.7 20.9 275 49-352 3-280 (379)
31 PRK09705 cynX putative cyanate 100.0 4.6E-27 1E-31 219.3 28.8 263 57-372 25-288 (393)
32 PLN00028 nitrate transmembrane 100.0 3E-27 6.5E-32 225.5 27.8 282 40-354 35-318 (476)
33 PRK10077 xylE D-xylose transpo 100.0 2.7E-27 5.9E-32 227.3 27.7 345 40-406 11-399 (479)
34 PRK15403 multidrug efflux syst 100.0 4.8E-27 1E-31 220.3 28.4 264 45-354 20-285 (413)
35 KOG0569 Permease of the major 100.0 1E-27 2.2E-32 221.0 22.7 324 68-407 46-404 (485)
36 TIGR00887 2A0109 phosphate:H+ 100.0 1.3E-27 2.8E-32 230.1 24.1 355 39-406 14-427 (502)
37 PRK15402 multidrug efflux syst 100.0 7.1E-27 1.5E-31 219.5 28.2 283 44-373 16-300 (406)
38 TIGR00879 SP MFS transporter, 100.0 1.3E-27 2.8E-32 229.3 23.1 298 46-372 33-367 (481)
39 TIGR00886 2A0108 nitrite extru 100.0 2.2E-27 4.7E-32 220.0 23.3 300 43-371 3-308 (366)
40 PRK03699 putative transporter; 100.0 1.8E-26 3.9E-31 215.6 29.0 284 39-372 5-289 (394)
41 PRK03893 putative sialic acid 100.0 2.1E-26 4.6E-31 222.0 28.2 304 38-369 17-356 (496)
42 TIGR00895 2A0115 benzoate tran 100.0 9.2E-27 2E-31 218.1 24.5 294 39-361 15-322 (398)
43 PRK11273 glpT sn-glycerol-3-ph 100.0 1.2E-26 2.5E-31 220.7 25.2 279 46-355 34-322 (452)
44 PRK11043 putative transporter; 100.0 4.3E-26 9.2E-31 213.9 28.6 273 43-367 8-281 (401)
45 KOG1330 Sugar transporter/spin 100.0 3.5E-28 7.5E-33 216.5 13.1 279 36-350 28-309 (493)
46 TIGR00898 2A0119 cation transp 100.0 2.7E-27 5.9E-32 228.7 20.5 310 62-406 110-445 (505)
47 TIGR00894 2A0114euk Na(+)-depe 100.0 1.6E-26 3.4E-31 220.9 25.1 285 38-354 16-327 (465)
48 PRK11102 bicyclomycin/multidru 100.0 2.4E-26 5.2E-31 213.9 25.2 267 54-366 4-272 (377)
49 PRK11195 lysophospholipid tran 100.0 1.7E-26 3.7E-31 215.3 23.6 275 42-362 4-279 (393)
50 PRK03633 putative MFS family t 100.0 1E-25 2.2E-30 209.7 28.9 275 41-370 6-281 (381)
51 PRK11646 multidrug resistance 100.0 1.3E-25 2.8E-30 209.9 29.1 311 44-406 13-332 (400)
52 COG2223 NarK Nitrate/nitrite t 100.0 9.3E-27 2E-31 205.9 19.0 291 37-374 10-304 (417)
53 PRK05122 major facilitator sup 99.9 1.6E-25 3.4E-30 210.0 27.6 276 40-374 14-299 (399)
54 TIGR00899 2A0120 sugar efflux 99.9 2.4E-25 5.2E-30 207.0 28.3 274 48-372 4-283 (375)
55 TIGR00805 oat sodium-independe 99.9 4.7E-27 1E-31 229.5 17.4 311 45-370 37-415 (633)
56 PRK12382 putative transporter; 99.9 1.8E-25 3.9E-30 209.0 27.4 275 41-374 15-299 (392)
57 TIGR00885 fucP L-fucose:H+ sym 99.9 3.1E-25 6.7E-30 207.4 28.7 303 42-375 4-320 (410)
58 PRK11652 emrD multidrug resist 99.9 2.5E-25 5.4E-30 208.2 28.2 266 39-354 6-273 (394)
59 TIGR00892 2A0113 monocarboxyla 99.9 2.1E-25 4.4E-30 211.8 27.4 284 37-350 15-302 (455)
60 KOG2533 Permease of the major 99.9 8.7E-26 1.9E-30 211.1 22.5 293 48-363 52-352 (495)
61 PRK10489 enterobactin exporter 99.9 4.6E-26 1E-30 214.7 20.9 284 45-375 21-310 (417)
62 TIGR00897 2A0118 polyol permea 99.9 6.2E-25 1.3E-29 205.8 28.1 273 41-358 13-291 (402)
63 TIGR00712 glpT glycerol-3-phos 99.9 1.5E-25 3.3E-30 212.2 24.2 284 41-354 27-317 (438)
64 PRK09874 drug efflux system pr 99.9 1.2E-24 2.5E-29 204.7 29.6 293 41-374 14-308 (408)
65 PRK10054 putative transporter; 99.9 3.8E-25 8.3E-30 206.4 25.7 284 41-373 7-293 (395)
66 TIGR00896 CynX cyanate transpo 99.9 6.9E-25 1.5E-29 202.3 24.0 267 55-373 14-282 (355)
67 KOG2532 Permease of the major 99.9 1.8E-25 3.8E-30 208.6 19.8 276 69-375 66-354 (466)
68 TIGR00902 2A0127 phenyl propri 99.9 4E-24 8.7E-29 198.9 28.7 281 45-377 8-293 (382)
69 TIGR00883 2A0106 metabolite-pr 99.9 1.8E-24 3.8E-29 202.3 25.9 275 51-364 3-295 (394)
70 cd06174 MFS The Major Facilita 99.9 2.9E-24 6.3E-29 197.6 25.4 290 45-406 3-300 (352)
71 TIGR00901 2A0125 AmpG-related 99.9 4.1E-24 8.9E-29 197.2 26.3 310 56-406 3-344 (356)
72 PRK11128 putative 3-phenylprop 99.9 1.3E-23 2.9E-28 195.5 27.9 275 50-376 13-292 (382)
73 KOG0254 Predicted transporter 99.9 4.5E-24 9.8E-29 205.6 24.2 331 57-406 63-430 (513)
74 PRK15011 sugar efflux transpor 99.9 1.7E-22 3.7E-27 188.8 31.2 273 44-369 18-297 (393)
75 PRK11010 ampG muropeptide tran 99.9 9.7E-23 2.1E-27 194.9 29.3 282 40-368 11-303 (491)
76 PRK11902 ampG muropeptide tran 99.9 1.7E-22 3.7E-27 189.4 28.6 276 47-369 5-291 (402)
77 COG0738 FucP Fucose permease [ 99.9 1.1E-22 2.4E-27 179.0 24.7 304 39-376 11-324 (422)
78 PRK08633 2-acyl-glycerophospho 99.9 6.2E-23 1.3E-27 217.1 27.2 336 41-406 9-357 (1146)
79 KOG3764 Vesicular amine transp 99.9 1.2E-24 2.6E-29 189.9 10.5 289 45-379 25-363 (464)
80 PF05977 MFS_3: Transmembrane 99.9 1.1E-22 2.5E-27 193.1 23.9 294 39-377 8-307 (524)
81 PRK06814 acylglycerophosphoeth 99.9 1.7E-22 3.7E-27 213.1 24.9 248 84-368 54-305 (1140)
82 TIGR00882 2A0105 oligosacchari 99.9 6E-22 1.3E-26 185.4 24.9 290 42-373 3-303 (396)
83 PRK09528 lacY galactoside perm 99.9 7.7E-22 1.7E-26 186.1 23.5 293 42-375 11-313 (420)
84 TIGR00889 2A0110 nucleoside tr 99.9 2.7E-21 5.8E-26 181.6 25.0 282 45-373 6-300 (418)
85 TIGR00924 yjdL_sub1_fam amino 99.9 6E-21 1.3E-25 181.7 26.4 173 41-235 10-190 (475)
86 PF06609 TRI12: Fungal trichot 99.9 2.2E-20 4.8E-25 177.0 28.0 294 49-371 52-397 (599)
87 KOG2504 Monocarboxylate transp 99.9 8.7E-21 1.9E-25 179.4 23.4 314 35-378 40-389 (509)
88 PRK10207 dipeptide/tripeptide 99.9 4.1E-20 8.8E-25 176.1 28.0 150 40-195 13-168 (489)
89 PF00083 Sugar_tr: Sugar (and 99.9 9.4E-26 2E-30 214.9 -11.5 342 48-407 7-385 (451)
90 KOG0255 Synaptic vesicle trans 99.9 6E-21 1.3E-25 184.9 21.7 303 68-405 110-440 (521)
91 KOG0253 Synaptic vesicle trans 99.9 2E-20 4.2E-25 161.8 21.9 191 38-251 75-265 (528)
92 TIGR00806 rfc RFC reduced fola 99.9 3.8E-20 8.3E-25 168.7 24.3 175 46-240 32-206 (511)
93 COG2807 CynX Cyanate permease 99.9 2.2E-19 4.8E-24 155.9 27.1 268 55-375 26-295 (395)
94 TIGR02718 sider_RhtX_FptX side 99.9 3.1E-19 6.8E-24 166.7 28.7 274 43-365 3-285 (390)
95 TIGR00792 gph sugar (Glycoside 99.9 4.3E-20 9.4E-25 175.3 22.5 281 53-373 11-306 (437)
96 KOG0252 Inorganic phosphate tr 99.8 1.3E-21 2.9E-26 174.0 5.4 361 37-407 34-442 (538)
97 PRK09584 tppB putative tripept 99.8 4.3E-18 9.3E-23 163.1 26.1 149 41-195 21-175 (500)
98 PF03825 Nuc_H_symport: Nucleo 99.8 1.4E-17 3E-22 154.0 27.0 284 45-374 6-293 (400)
99 TIGR01301 GPH_sucrose GPH fami 99.8 1.7E-17 3.7E-22 155.3 26.9 314 39-376 2-358 (477)
100 PRK09669 putative symporter Ya 99.8 4E-17 8.6E-22 155.1 25.6 286 38-366 6-306 (444)
101 PTZ00207 hypothetical protein; 99.8 7.7E-17 1.7E-21 154.0 24.9 130 57-194 43-180 (591)
102 PRK10429 melibiose:sodium symp 99.8 8.6E-17 1.9E-21 153.8 23.6 293 41-371 6-313 (473)
103 KOG2325 Predicted transporter/ 99.8 1.5E-16 3.4E-21 146.1 21.4 202 33-245 26-238 (488)
104 TIGR00788 fbt folate/biopterin 99.8 2.1E-16 4.5E-21 150.3 22.5 299 39-370 24-334 (468)
105 PRK15462 dipeptide/tripeptide 99.7 1.1E-15 2.3E-20 143.9 26.4 149 41-195 9-163 (493)
106 PF13347 MFS_2: MFS/sugar tran 99.7 1.1E-16 2.3E-21 151.4 19.2 272 63-375 24-311 (428)
107 PF01306 LacY_symp: LacY proto 99.7 7.8E-16 1.7E-20 139.9 21.9 295 41-377 7-312 (412)
108 PRK09848 glucuronide transport 99.7 3E-15 6.5E-20 142.5 26.7 288 38-373 5-313 (448)
109 COG2211 MelB Na+/melibiose sym 99.7 1.6E-15 3.4E-20 139.3 23.0 301 37-375 8-323 (467)
110 PRK11462 putative transporter; 99.7 1.3E-14 2.7E-19 138.0 26.8 283 38-364 6-303 (460)
111 KOG2563 Permease of the major 99.7 1E-14 2.3E-19 130.6 23.9 291 40-367 44-345 (480)
112 KOG4686 Predicted sugar transp 99.7 5.3E-17 1.1E-21 135.9 7.4 289 41-362 44-338 (459)
113 KOG2816 Predicted transporter 99.7 2.6E-14 5.6E-19 133.4 24.8 329 45-405 26-364 (463)
114 TIGR01272 gluP glucose/galacto 99.7 6.3E-15 1.4E-19 132.5 20.0 216 131-371 6-225 (310)
115 PF03137 OATP: Organic Anion T 99.7 6.4E-18 1.4E-22 161.4 -0.2 313 45-369 7-389 (539)
116 PRK10642 proline/glycine betai 99.7 7.8E-15 1.7E-19 141.0 19.2 174 51-245 260-438 (490)
117 KOG3626 Organic anion transpor 99.6 2.1E-15 4.6E-20 144.3 14.0 311 45-369 101-476 (735)
118 TIGR01299 synapt_SV2 synaptic 99.6 8.7E-15 1.9E-19 144.3 17.0 140 85-241 598-738 (742)
119 PF05631 DUF791: Protein of un 99.6 3.4E-13 7.4E-18 118.8 24.2 275 50-370 43-325 (354)
120 PF11700 ATG22: Vacuole efflux 99.6 1.5E-12 3.3E-17 123.0 30.4 299 81-405 69-414 (477)
121 TIGR00889 2A0110 nucleoside tr 99.6 7E-15 1.5E-19 138.2 14.6 183 50-242 217-408 (418)
122 PRK15011 sugar efflux transpor 99.6 3.8E-14 8.2E-19 132.5 17.9 159 57-238 232-392 (393)
123 TIGR00880 2_A_01_02 Multidrug 99.6 1.1E-14 2.3E-19 115.1 10.3 135 88-238 4-140 (141)
124 PRK11551 putative 3-hydroxyphe 99.6 6.6E-14 1.4E-18 131.6 17.0 139 51-195 230-369 (406)
125 PRK05122 major facilitator sup 99.6 8.1E-14 1.8E-18 130.7 17.3 163 55-241 230-393 (399)
126 TIGR00890 2A0111 Oxalate/Forma 99.6 3.6E-14 7.8E-19 131.8 13.9 139 51-195 215-356 (377)
127 cd06174 MFS The Major Facilita 99.5 1.9E-13 4E-18 125.6 16.8 164 50-235 184-350 (352)
128 PF03209 PUCC: PUCC protein; 99.5 1.8E-12 4E-17 116.0 22.1 268 66-376 5-297 (403)
129 TIGR00902 2A0127 phenyl propri 99.5 1.8E-13 4E-18 127.4 16.3 148 41-195 205-354 (382)
130 PRK09528 lacY galactoside perm 99.5 6.8E-14 1.5E-18 132.1 13.4 139 84-238 264-405 (420)
131 TIGR00899 2A0120 sugar efflux 99.5 2.9E-13 6.3E-18 125.8 16.9 156 60-238 218-375 (375)
132 PRK09874 drug efflux system pr 99.5 3.2E-13 6.9E-18 127.1 16.1 163 54-234 232-395 (408)
133 PRK12382 putative transporter; 99.5 5.8E-13 1.3E-17 124.6 16.7 156 55-234 230-386 (392)
134 PRK09705 cynX putative cyanate 99.5 1.5E-12 3.2E-17 121.8 19.2 178 43-243 207-388 (393)
135 PRK10489 enterobactin exporter 99.5 4.1E-13 8.9E-18 126.7 15.4 161 59-241 241-404 (417)
136 TIGR00892 2A0113 monocarboxyla 99.5 1.4E-13 2.9E-18 131.1 12.2 147 43-195 243-394 (455)
137 COG3104 PTR2 Dipeptide/tripept 99.5 6.5E-12 1.4E-16 114.8 21.7 175 41-237 21-206 (498)
138 TIGR00897 2A0118 polyol permea 99.5 6.9E-13 1.5E-17 124.5 16.0 170 44-236 225-400 (402)
139 PRK03633 putative MFS family t 99.5 1.1E-12 2.3E-17 122.3 16.9 155 56-235 215-370 (381)
140 TIGR00893 2A0114 d-galactonate 99.5 1.2E-12 2.7E-17 122.2 16.4 148 41-195 215-372 (399)
141 PRK03893 putative sialic acid 99.5 1.1E-12 2.3E-17 126.8 16.1 131 59-195 293-427 (496)
142 PRK03699 putative transporter; 99.5 1.1E-12 2.4E-17 122.7 15.5 173 43-238 207-381 (394)
143 PRK03545 putative arabinose tr 99.5 2.2E-12 4.8E-17 120.6 17.5 150 62-234 226-377 (390)
144 TIGR00883 2A0106 metabolite-pr 99.5 7.7E-13 1.7E-17 123.6 12.7 147 43-195 221-374 (394)
145 PRK09556 uhpT sugar phosphate 99.4 2E-12 4.3E-17 123.8 15.6 147 43-195 260-411 (467)
146 COG2270 Permeases of the major 99.4 3.5E-11 7.6E-16 107.7 22.0 304 81-405 57-375 (438)
147 PRK09952 shikimate transporter 99.4 3.7E-12 8E-17 120.8 16.9 169 51-239 260-435 (438)
148 TIGR00895 2A0115 benzoate tran 99.4 3.6E-12 7.8E-17 119.3 14.2 142 46-193 255-397 (398)
149 PRK11128 putative 3-phenylprop 99.4 8E-12 1.7E-16 116.5 16.2 143 46-195 210-354 (382)
150 TIGR00879 SP MFS transporter, 99.4 7.9E-12 1.7E-16 119.9 16.2 173 46-240 289-474 (481)
151 PRK11663 regulatory protein Uh 99.4 1.2E-11 2.7E-16 117.1 16.9 167 44-233 246-420 (434)
152 PRK11273 glpT sn-glycerol-3-ph 99.4 8.4E-12 1.8E-16 118.9 14.6 170 43-234 255-432 (452)
153 TIGR00891 2A0112 putative sial 99.4 7.1E-12 1.5E-16 117.7 13.2 131 59-195 256-389 (405)
154 PRK12307 putative sialic acid 99.4 1.7E-11 3.7E-16 116.0 15.8 130 60-195 250-382 (426)
155 TIGR00900 2A0121 H+ Antiporter 99.4 4.4E-12 9.4E-17 117.3 11.1 128 62-195 232-362 (365)
156 PF11700 ATG22: Vacuole efflux 99.4 4E-11 8.7E-16 113.4 17.5 178 42-240 282-471 (477)
157 PRK10504 putative transporter; 99.3 2.6E-11 5.7E-16 116.3 15.9 147 43-195 263-414 (471)
158 PF05977 MFS_3: Transmembrane 99.3 4.2E-11 9.2E-16 114.4 16.9 137 53-195 230-368 (524)
159 TIGR00887 2A0109 phosphate:H+ 99.3 3.2E-11 7E-16 116.5 15.6 181 56-242 303-494 (502)
160 COG2814 AraJ Arabinose efflux 99.3 7.7E-11 1.7E-15 106.4 16.8 171 41-235 211-384 (394)
161 PLN00028 nitrate transmembrane 99.3 1.4E-11 3E-16 118.0 12.2 154 60-237 271-433 (476)
162 PRK11010 ampG muropeptide tran 99.3 4.9E-10 1.1E-14 107.6 22.3 153 65-239 247-405 (491)
163 KOG0569 Permease of the major 99.3 1E-10 2.3E-15 108.8 16.9 172 49-243 278-461 (485)
164 TIGR00882 2A0105 oligosacchari 99.3 3.9E-11 8.5E-16 112.4 14.2 131 84-230 256-388 (396)
165 TIGR02718 sider_RhtX_FptX side 99.3 5.3E-11 1.2E-15 111.3 14.0 159 51-231 218-385 (390)
166 PRK15075 citrate-proton sympor 99.3 1.4E-10 3.1E-15 109.9 16.9 138 52-195 249-393 (434)
167 PRK15402 multidrug efflux syst 99.3 1E-10 2.2E-15 110.0 15.3 129 60-195 234-369 (406)
168 TIGR00792 gph sugar (Glycoside 99.3 1.9E-11 4.2E-16 116.1 10.4 145 44-195 225-379 (437)
169 TIGR00898 2A0119 cation transp 99.3 4.8E-11 1E-15 115.6 13.3 136 89-242 362-500 (505)
170 PRK10077 xylE D-xylose transpo 99.3 2.3E-10 5E-15 110.1 17.2 170 56-241 286-462 (479)
171 TIGR00712 glpT glycerol-3-phos 99.3 1.2E-10 2.7E-15 110.5 15.1 171 48-240 258-437 (438)
172 PRK10406 alpha-ketoglutarate t 99.3 3E-10 6.5E-15 107.7 17.6 135 54-194 256-397 (432)
173 TIGR00896 CynX cyanate transpo 99.3 1.8E-10 3.9E-15 106.3 15.7 143 48-197 204-349 (355)
174 TIGR00881 2A0104 phosphoglycer 99.2 4.3E-11 9.3E-16 111.2 11.2 145 45-195 220-371 (379)
175 PRK10213 nepI ribonucleoside t 99.2 4.7E-10 1E-14 104.9 17.6 125 64-195 240-365 (394)
176 COG2271 UhpC Sugar phosphate p 99.2 7.7E-11 1.7E-15 105.4 11.5 169 41-231 252-428 (448)
177 KOG2504 Monocarboxylate transp 99.2 1.1E-10 2.3E-15 111.1 13.2 174 43-237 300-476 (509)
178 PRK10054 putative transporter; 99.2 1.5E-10 3.1E-15 108.4 13.5 111 84-195 246-358 (395)
179 PF03825 Nuc_H_symport: Nucleo 99.2 3.6E-10 7.9E-15 104.8 15.4 182 42-239 208-398 (400)
180 COG2270 Permeases of the major 99.2 3.1E-10 6.7E-15 101.7 13.8 172 47-239 258-431 (438)
181 PF01770 Folate_carrier: Reduc 99.2 4E-08 8.7E-13 89.5 25.9 177 44-241 8-186 (412)
182 PRK10091 MFS transport protein 99.2 8.2E-10 1.8E-14 102.9 15.7 123 65-195 224-349 (382)
183 TIGR01272 gluP glucose/galacto 99.2 1.1E-09 2.3E-14 98.6 15.7 145 42-195 141-289 (310)
184 PF03092 BT1: BT1 family; Int 99.2 2.5E-09 5.4E-14 100.7 18.7 275 61-367 10-298 (433)
185 COG2223 NarK Nitrate/nitrite t 99.2 3E-10 6.4E-15 101.8 11.7 173 41-235 218-399 (417)
186 PRK11646 multidrug resistance 99.2 3.2E-10 7E-15 106.2 12.7 130 61-196 228-359 (400)
187 KOG4686 Predicted sugar transp 99.2 1.2E-09 2.6E-14 92.3 14.4 152 37-198 263-416 (459)
188 PF06813 Nodulin-like: Nodulin 99.2 2.2E-09 4.8E-14 91.8 16.0 134 54-195 15-156 (250)
189 TIGR02332 HpaX 4-hydroxyphenyl 99.2 7.2E-10 1.6E-14 104.3 14.4 145 45-195 246-394 (412)
190 PRK11902 ampG muropeptide tran 99.2 6E-10 1.3E-14 104.6 13.8 149 65-239 234-392 (402)
191 TIGR00894 2A0114euk Na(+)-depe 99.1 7.8E-10 1.7E-14 105.9 14.3 176 42-237 262-450 (465)
192 TIGR00711 efflux_EmrB drug res 99.1 6.8E-10 1.5E-14 107.0 13.0 143 47-195 261-409 (485)
193 KOG0253 Synaptic vesicle trans 99.1 2.9E-10 6.2E-15 99.6 8.9 128 92-237 391-519 (528)
194 TIGR00901 2A0125 AmpG-related 99.1 9.7E-10 2.1E-14 101.5 12.5 132 43-180 211-355 (356)
195 PF07690 MFS_1: Major Facilita 99.1 7.4E-10 1.6E-14 101.9 10.4 136 46-187 211-352 (352)
196 PRK08633 2-acyl-glycerophospho 99.1 2.7E-09 5.9E-14 113.7 16.0 134 56-195 247-383 (1146)
197 PRK14995 methyl viologen resis 99.1 1.9E-09 4.1E-14 103.9 13.3 142 48-195 266-412 (495)
198 PF13347 MFS_2: MFS/sugar tran 99.1 2.8E-09 6.1E-14 100.9 13.8 149 41-195 225-383 (428)
199 TIGR00903 2A0129 major facilit 99.1 9.2E-09 2E-13 95.0 16.8 143 42-194 193-340 (368)
200 TIGR00710 efflux_Bcr_CflA drug 99.1 3.5E-09 7.5E-14 98.8 14.1 125 59-190 224-356 (385)
201 KOG0637 Sucrose transporter an 99.0 9.6E-09 2.1E-13 92.8 15.8 147 41-193 32-202 (498)
202 PRK10473 multidrug efflux syst 99.0 3.9E-09 8.5E-14 98.8 14.2 123 63-195 225-348 (392)
203 PRK06814 acylglycerophosphoeth 99.0 3.6E-09 7.9E-14 112.5 14.9 144 46-195 230-395 (1140)
204 PF01306 LacY_symp: LacY proto 99.0 4.9E-09 1.1E-13 95.9 13.3 142 84-241 261-405 (412)
205 PRK15034 nitrate/nitrite trans 99.0 6.6E-09 1.4E-13 97.3 14.2 146 43-195 254-427 (462)
206 PRK11043 putative transporter; 99.0 1.1E-08 2.3E-13 96.1 15.7 129 60-195 222-356 (401)
207 PRK11195 lysophospholipid tran 99.0 1.7E-08 3.8E-13 94.3 16.8 122 66-194 231-354 (393)
208 PRK09848 glucuronide transport 99.0 2.6E-09 5.6E-14 101.8 11.2 146 44-195 231-387 (448)
209 TIGR00926 2A1704 Peptide:H+ sy 99.0 2.8E-07 6E-12 90.5 24.4 160 59-233 6-178 (654)
210 PRK11102 bicyclomycin/multidru 99.0 1.5E-08 3.2E-13 94.3 14.5 131 54-191 207-344 (377)
211 PRK10133 L-fucose transporter; 99.0 1.2E-08 2.6E-13 96.7 13.9 125 62-195 279-406 (438)
212 PRK10429 melibiose:sodium symp 99.0 7.7E-09 1.7E-13 99.2 12.7 148 42-195 232-392 (473)
213 PF06963 FPN1: Ferroportin1 (F 99.0 9.7E-07 2.1E-11 82.0 25.7 297 42-368 3-337 (432)
214 PRK09669 putative symporter Ya 98.9 4.3E-09 9.4E-14 100.1 10.4 112 84-195 266-387 (444)
215 COG0477 ProP Permeases of the 98.9 1.1E-07 2.4E-12 85.3 16.5 142 48-195 9-157 (338)
216 TIGR00788 fbt folate/biopterin 98.8 1.8E-08 3.8E-13 96.2 10.6 122 69-196 281-413 (468)
217 TIGR00769 AAA ADP/ATP carrier 98.8 1.7E-06 3.8E-11 81.3 22.9 296 41-366 7-345 (472)
218 KOG2532 Permease of the major 98.8 9.3E-08 2E-12 90.2 13.5 180 36-236 247-446 (466)
219 KOG3762 Predicted transporter 98.8 2.3E-08 5E-13 92.1 7.8 142 48-195 378-521 (618)
220 COG2807 CynX Cyanate permease 98.7 5.7E-07 1.2E-11 79.4 15.7 148 43-197 210-360 (395)
221 PRK11652 emrD multidrug resist 98.7 5.1E-07 1.1E-11 84.6 16.6 127 62-195 228-359 (394)
222 TIGR00886 2A0108 nitrite extru 98.7 2.9E-08 6.2E-13 91.9 8.1 120 56-182 240-365 (366)
223 TIGR00885 fucP L-fucose:H+ sym 98.7 2.5E-07 5.4E-12 86.9 13.9 142 47-195 238-380 (410)
224 KOG0252 Inorganic phosphate tr 98.7 2.8E-08 6.1E-13 89.9 6.8 192 42-244 305-505 (538)
225 PRK11462 putative transporter; 98.7 6.6E-07 1.4E-11 85.4 16.1 112 84-195 265-386 (460)
226 TIGR00924 yjdL_sub1_fam amino 98.7 7.4E-07 1.6E-11 85.4 16.5 150 44-195 275-442 (475)
227 KOG3764 Vesicular amine transp 98.7 8.1E-08 1.8E-12 85.5 9.0 160 49-230 278-447 (464)
228 COG2211 MelB Na+/melibiose sym 98.6 7.2E-07 1.6E-11 82.8 14.2 147 43-195 238-395 (467)
229 PF06779 DUF1228: Protein of u 98.6 1.1E-07 2.4E-12 65.9 6.4 80 53-138 4-83 (85)
230 PF00083 Sugar_tr: Sugar (and 98.6 3.4E-10 7.4E-15 108.0 -9.7 165 56-243 268-443 (451)
231 PF03209 PUCC: PUCC protein; 98.6 1.9E-06 4.2E-11 77.8 14.8 143 48-196 215-363 (403)
232 KOG3098 Uncharacterized conser 98.6 5.5E-06 1.2E-10 77.0 17.9 261 88-371 56-329 (461)
233 COG0738 FucP Fucose permease [ 98.5 8.9E-07 1.9E-11 79.4 11.4 146 41-195 236-383 (422)
234 PRK15403 multidrug efflux syst 98.5 1.9E-06 4.2E-11 81.1 14.4 146 43-195 220-372 (413)
235 TIGR01301 GPH_sucrose GPH fami 98.5 8.1E-06 1.8E-10 77.3 17.4 186 42-241 259-476 (477)
236 PRK09584 tppB putative tripept 98.5 2.9E-06 6.3E-11 81.9 14.5 109 84-192 318-440 (500)
237 PF12832 MFS_1_like: MFS_1 lik 98.5 5E-07 1.1E-11 62.2 6.1 70 46-121 5-74 (77)
238 PF05978 UNC-93: Ion channel r 98.4 7.2E-06 1.6E-10 64.9 12.7 106 88-194 43-149 (156)
239 PF02487 CLN3: CLN3 protein; 98.4 5.8E-05 1.3E-09 69.1 19.9 106 84-194 61-167 (402)
240 KOG0254 Predicted transporter 98.4 6.4E-06 1.4E-10 79.9 14.7 179 43-243 297-490 (513)
241 PRK10207 dipeptide/tripeptide 98.4 5.1E-06 1.1E-10 79.8 12.6 111 84-194 311-439 (489)
242 PTZ00207 hypothetical protein; 98.3 7.2E-06 1.6E-10 79.4 11.3 184 41-234 353-549 (591)
243 KOG3574 Acetyl-CoA transporter 98.3 2E-05 4.3E-10 70.0 12.4 275 38-347 28-324 (510)
244 KOG2533 Permease of the major 98.2 4.2E-06 9.1E-11 79.4 6.8 139 43-187 275-421 (495)
245 KOG4332 Predicted sugar transp 98.2 1.6E-05 3.4E-10 67.3 9.3 107 50-163 46-154 (454)
246 KOG2615 Permease of the major 98.1 6.3E-05 1.4E-09 67.1 12.9 121 69-195 290-413 (451)
247 COG3202 ATP/ADP translocase [E 98.1 0.0021 4.5E-08 59.7 22.6 306 39-367 25-365 (509)
248 KOG2816 Predicted transporter 98.1 2.8E-05 6.1E-10 73.3 10.8 124 66-195 267-391 (463)
249 KOG0255 Synaptic vesicle trans 98.0 0.00031 6.8E-09 68.4 17.0 142 86-244 354-500 (521)
250 PF03219 TLC: TLC ATP/ADP tran 98.0 0.0011 2.3E-08 63.1 19.7 302 39-364 22-359 (491)
251 PF06609 TRI12: Fungal trichot 98.0 6.3E-05 1.4E-09 72.6 11.5 195 41-242 310-559 (599)
252 PRK15462 dipeptide/tripeptide 97.7 0.00046 1E-08 65.8 12.3 111 84-194 310-438 (493)
253 PF12832 MFS_1_like: MFS_1 lik 97.7 0.00047 1E-08 47.5 8.2 71 286-363 4-74 (77)
254 PF13000 Acatn: Acetyl-coenzym 97.6 0.0028 6E-08 59.1 14.9 285 44-347 3-337 (544)
255 PF02487 CLN3: CLN3 protein; 97.5 0.0032 6.9E-08 57.9 14.0 108 84-195 283-396 (402)
256 KOG3810 Micronutrient transpor 97.5 0.00067 1.5E-08 59.9 8.9 101 95-195 55-155 (433)
257 PF00854 PTR2: POT family; In 97.4 0.00078 1.7E-08 62.5 9.5 107 113-235 2-121 (372)
258 KOG2563 Permease of the major 97.2 0.00068 1.5E-08 62.1 6.1 144 46-195 271-420 (480)
259 PF03092 BT1: BT1 family; Int 97.2 0.00077 1.7E-08 63.8 6.9 149 84-241 257-417 (433)
260 KOG1330 Sugar transporter/spin 97.0 0.0043 9.3E-08 57.3 8.8 114 84-197 285-413 (493)
261 KOG3762 Predicted transporter 97.0 0.00041 8.8E-09 64.9 2.1 86 41-132 11-97 (618)
262 COG3104 PTR2 Dipeptide/tripept 96.8 0.017 3.7E-07 54.1 11.5 109 84-192 326-452 (498)
263 KOG1237 H+/oligopeptide sympor 96.8 0.042 9.2E-07 53.6 14.7 152 38-195 34-219 (571)
264 PRK03612 spermidine synthase; 96.7 0.086 1.9E-06 51.1 16.2 122 66-195 40-170 (521)
265 TIGR00806 rfc RFC reduced fola 96.7 0.02 4.4E-07 53.8 10.9 88 318-406 56-149 (511)
266 PF06963 FPN1: Ferroportin1 (F 96.7 0.025 5.5E-07 53.0 11.6 138 52-195 269-417 (432)
267 KOG3097 Predicted membrane pro 96.7 0.27 6E-06 43.6 16.8 67 96-163 72-139 (390)
268 KOG2325 Predicted transporter/ 96.6 0.0039 8.4E-08 58.6 6.0 158 36-195 257-449 (488)
269 KOG1479 Nucleoside transporter 96.4 0.46 1E-05 43.8 17.3 121 42-167 19-149 (406)
270 PF06779 DUF1228: Protein of u 96.3 0.037 8.1E-07 38.6 7.7 71 299-376 9-79 (85)
271 PF05631 DUF791: Protein of un 96.0 0.21 4.5E-06 45.1 13.1 52 318-370 64-115 (354)
272 TIGR00939 2a57 Equilibrative N 96.0 0.13 2.8E-06 48.7 12.4 110 83-193 308-431 (437)
273 KOG3098 Uncharacterized conser 95.9 0.2 4.4E-06 47.2 13.2 145 43-193 242-411 (461)
274 PF07672 MFS_Mycoplasma: Mycop 95.7 0.19 4E-06 43.2 10.6 108 166-297 2-109 (267)
275 TIGR00805 oat sodium-independe 95.3 0.068 1.5E-06 53.3 8.1 78 44-127 333-414 (633)
276 TIGR00939 2a57 Equilibrative N 95.3 1.1 2.4E-05 42.5 15.7 51 134-189 105-156 (437)
277 TIGR00880 2_A_01_02 Multidrug 95.1 0.036 7.7E-07 42.7 4.5 75 331-406 6-86 (141)
278 PF01733 Nucleoside_tran: Nucl 94.6 0.011 2.4E-07 53.3 0.5 106 86-192 186-306 (309)
279 PF03137 OATP: Organic Anion T 94.6 0.0094 2E-07 57.9 0.0 147 44-196 308-514 (539)
280 PF01770 Folate_carrier: Reduc 94.0 1.4 3E-05 41.1 12.6 114 79-195 282-398 (412)
281 KOG1479 Nucleoside transporter 93.5 1.4 3.1E-05 40.7 11.6 108 82-191 282-400 (406)
282 KOG3880 Predicted small molecu 92.8 0.4 8.6E-06 42.3 6.6 108 84-195 64-171 (409)
283 KOG4830 Predicted sugar transp 91.4 0.13 2.8E-06 43.9 2.1 66 44-115 20-94 (412)
284 KOG0637 Sucrose transporter an 90.9 0.69 1.5E-05 43.1 6.4 111 85-195 335-469 (498)
285 PF06813 Nodulin-like: Nodulin 87.6 3.6 7.8E-05 35.6 8.2 56 316-373 30-85 (250)
286 KOG3880 Predicted small molecu 86.3 3.3 7.2E-05 36.7 7.1 76 119-194 326-402 (409)
287 KOG4332 Predicted sugar transp 81.2 16 0.00034 32.0 8.9 98 84-181 284-391 (454)
288 PF07672 MFS_Mycoplasma: Mycop 79.9 29 0.00064 30.1 10.2 102 84-185 143-254 (267)
289 PF13000 Acatn: Acetyl-coenzym 78.0 12 0.00026 35.8 7.9 54 142-195 412-466 (544)
290 KOG3626 Organic anion transpor 76.1 4.4 9.5E-05 40.7 4.8 75 45-125 396-474 (735)
291 PRK11469 hypothetical protein; 74.6 47 0.001 27.4 13.2 52 319-370 130-181 (188)
292 KOG3810 Micronutrient transpor 74.4 39 0.00084 30.9 9.7 112 81-195 270-384 (433)
293 KOG1237 H+/oligopeptide sympor 70.4 80 0.0017 31.3 11.9 64 134-197 457-521 (571)
294 TIGR00769 AAA ADP/ATP carrier 67.4 1.2E+02 0.0027 29.2 14.9 147 46-194 269-437 (472)
295 KOG2601 Iron transporter [Inor 66.5 47 0.001 30.8 8.5 152 39-195 25-200 (503)
296 TIGR02230 ATPase_gene1 F0F1-AT 66.2 33 0.00072 24.8 6.2 27 342-368 61-87 (100)
297 PF01733 Nucleoside_tran: Nucl 65.9 1.9 4.2E-05 38.8 -0.1 41 143-188 5-46 (309)
298 COG5336 Uncharacterized protei 64.8 16 0.00035 26.5 4.3 24 86-109 46-69 (116)
299 TIGR00926 2A1704 Peptide:H+ sy 63.0 29 0.00063 35.0 7.5 66 302-373 7-73 (654)
300 PF05978 UNC-93: Ion channel r 62.2 78 0.0017 25.1 9.8 36 335-371 49-84 (156)
301 PF11947 DUF3464: Protein of u 61.3 23 0.00051 27.9 5.1 50 134-185 96-145 (153)
302 PF07857 DUF1632: CEO family ( 57.8 1.3E+02 0.0028 26.2 11.6 19 220-238 119-137 (254)
303 COG2233 UraA Xanthine/uracil p 56.1 84 0.0018 29.9 8.7 71 37-115 12-82 (451)
304 TIGR02840 spore_YtaF putative 53.5 1.3E+02 0.0029 25.1 14.3 48 319-367 153-202 (206)
305 PF06912 DUF1275: Protein of u 52.5 1.4E+02 0.003 25.0 12.5 23 173-195 165-187 (209)
306 PF02990 EMP70: Endomembrane p 51.1 2.5E+02 0.0054 27.6 12.0 28 326-354 300-327 (521)
307 KOG2881 Predicted membrane pro 50.4 85 0.0018 27.2 7.0 27 343-369 259-285 (294)
308 PF02694 UPF0060: Uncharacteri 49.7 44 0.00095 24.4 4.5 48 84-131 56-103 (107)
309 COG2836 Uncharacterized conser 49.1 1.7E+02 0.0036 24.9 12.0 43 321-364 162-207 (232)
310 PF07760 DUF1616: Protein of u 47.9 2E+02 0.0044 25.5 11.2 57 138-194 22-78 (287)
311 KOG3574 Acetyl-CoA transporter 47.8 1.5E+02 0.0033 27.8 8.6 54 142-195 376-430 (510)
312 PF00854 PTR2: POT family; In 47.6 1.2E+02 0.0025 28.1 8.5 87 46-133 36-123 (372)
313 COG3559 TnrB3 Putative exporte 46.6 2.6E+02 0.0056 26.4 18.7 25 319-343 340-364 (536)
314 KOG1277 Endosomal membrane pro 43.5 1.4E+02 0.003 28.3 7.7 30 84-113 325-358 (593)
315 PRK02237 hypothetical protein; 43.3 69 0.0015 23.5 4.7 48 84-131 58-105 (109)
316 TIGR00801 ncs2 uracil-xanthine 42.7 2.2E+02 0.0047 27.0 9.4 122 41-171 5-131 (415)
317 COG1268 BioY Uncharacterized c 41.2 66 0.0014 26.4 4.9 24 88-111 88-111 (184)
318 PF11085 YqhR: Conserved membr 40.4 2E+02 0.0042 23.2 7.5 67 302-371 47-116 (173)
319 COG4262 Predicted spermidine s 38.8 3.2E+02 0.007 25.3 14.3 84 72-161 39-132 (508)
320 COG4769 Predicted membrane pro 38.0 26 0.00057 27.7 2.1 53 90-148 81-133 (181)
321 COG2119 Predicted membrane pro 35.5 2.5E+02 0.0054 23.0 8.6 38 90-127 142-179 (190)
322 TIGR03644 marine_trans_1 proba 34.8 4E+02 0.0086 25.2 11.2 30 161-190 315-344 (404)
323 TIGR00267 conserved hypothetic 34.3 1.6E+02 0.0034 23.8 6.1 20 97-116 128-147 (169)
324 PRK11469 hypothetical protein; 34.3 2.3E+02 0.005 23.4 7.2 76 39-127 104-180 (188)
325 PF06341 DUF1056: Protein of u 33.0 88 0.0019 20.4 3.5 36 134-169 27-62 (63)
326 COG0477 ProP Permeases of the 32.8 2E+02 0.0043 24.7 7.4 40 323-363 39-78 (338)
327 PRK03612 spermidine synthase; 32.4 5E+02 0.011 25.5 10.9 55 289-349 21-75 (521)
328 COG1971 Predicted membrane pro 32.3 2.9E+02 0.0063 22.8 15.9 29 342-370 155-183 (190)
329 PF02632 BioY: BioY family; I 31.9 1.2E+02 0.0027 23.8 5.0 26 88-113 59-84 (148)
330 PRK10263 DNA translocase FtsK; 31.2 1.9E+02 0.0041 31.7 7.5 10 182-191 143-152 (1355)
331 PF04281 Tom22: Mitochondrial 30.0 1.6E+02 0.0034 22.9 5.1 30 157-186 58-87 (137)
332 PF11151 DUF2929: Protein of u 27.9 1.7E+02 0.0036 18.7 5.8 28 212-239 28-55 (57)
333 PRK10599 calcium/sodium:proton 27.8 4.4E+02 0.0096 24.5 8.5 40 43-88 224-263 (366)
334 PF10785 NADH-u_ox-rdase: NADH 25.5 1.7E+02 0.0036 20.6 4.3 39 96-134 32-77 (86)
335 PF09527 ATPase_gene1: Putativ 24.7 1.8E+02 0.004 18.1 6.4 26 341-366 18-43 (55)
336 PTZ00101 rhomboid-1 protease; 24.4 5E+02 0.011 23.0 11.1 36 93-128 119-155 (278)
337 PF12805 FUSC-like: FUSC-like 23.8 4.3E+02 0.0093 23.3 7.7 34 117-150 4-38 (284)
338 PF04346 EutH: Ethanolamine ut 23.6 5.8E+02 0.013 23.5 8.9 91 84-175 49-144 (354)
339 TIGR01666 YCCS hypothetical me 22.5 4.7E+02 0.01 26.9 8.3 50 101-150 42-96 (704)
340 PF02535 Zip: ZIP Zinc transpo 22.3 5.6E+02 0.012 22.8 12.1 32 136-167 261-294 (317)
341 PF09605 Trep_Strep: Hypotheti 21.4 3.7E+02 0.0081 22.1 6.3 39 91-129 37-75 (186)
342 PF03219 TLC: TLC ATP/ADP tran 21.3 7.7E+02 0.017 24.0 15.7 51 145-195 292-344 (491)
343 COG5547 Small integral membran 20.9 2.1E+02 0.0045 18.2 3.5 40 112-151 8-47 (62)
344 PLN02878 homogentisate phytylt 20.7 4.7E+02 0.01 23.2 6.9 73 108-180 195-267 (280)
345 TIGR00367 K+-dependent Na+/Ca+ 20.0 4.9E+02 0.011 23.4 7.3 37 41-77 170-206 (307)
No 1
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-31 Score=239.72 Aligned_cols=289 Identities=20% Similarity=0.229 Sum_probs=248.2
Q ss_pred CCchHHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHH
Q 015396 37 GLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII 116 (407)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~ 116 (407)
+..+..++.+.++.|.......+....+|++.+|+|+|..+ .|+..++|.++..++.|+...+.||+.||++++
T Consensus 9 ~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~------aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl 82 (394)
T COG2814 9 KPMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGA------AGQLITAYALGVALGAPLLALLTGRLERRRLLL 82 (394)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHcccchHHHHH
Confidence 34557788889999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 117 MGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
....++.++++++++++|++.++++|++.|++.|.+.+. .++.++..|+++|++++++...+..++.++|.+++.++.+
T Consensus 83 ~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~ 162 (394)
T COG2814 83 GLLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQ 162 (394)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 999999999999999999999999999999999998886 9999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHH-HhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccccc
Q 015396 196 PAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATP 274 (407)
Q Consensus 196 ~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (407)
.+|||+.| ...++.+++.++. +..+| |+..+++++. +..+
T Consensus 163 -------~~GWR~~F---------~~ia~l~ll~~~~~~~~lP--~~~~~~~~~~---------------------~~~~ 203 (394)
T COG2814 163 -------LFGWRATF---------LAIAVLALLALLLLWKLLP--PSEISGSLPG---------------------PLRT 203 (394)
T ss_pred -------HhhHHHHH---------HHHHHHHHHHHHHHHHhCC--CccCCCCCCc---------------------chhH
Confidence 55555555 7777777765544 56678 2221111110 1123
Q ss_pred cccccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchh
Q 015396 275 KKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI 354 (407)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 354 (407)
..+++|+|+++...+..++....++..+++...++.+. .|++....++.+..++++.++++. +++++.|| +.+
T Consensus 204 ~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v-----~g~s~~~vs~~Ll~~Gv~~~~Gn~-~gGrl~dr-~~~ 276 (394)
T COG2814 204 LLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESV-----AGFSVSAVSLVLLAFGIAGFIGNL-LGGRLADR-GPR 276 (394)
T ss_pred HHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHc-----cCCCHhHHHHHHHHHHHHHHHHHH-HHhhhccc-cch
Confidence 46789999999999999999988888888888777776 899999999999999999999996 99999999 888
Q ss_pred HHHHHHHHHHHHHHhhhhHHHhh
Q 015396 355 MVARIAGVLTIPLLTSYPYIAML 377 (407)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~ 377 (407)
+.+.....+.++.++.+.+....
T Consensus 277 ~~l~~~~~l~a~~~l~l~~~~~~ 299 (394)
T COG2814 277 RALIAALLLLALALLALTFTGAS 299 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHhcch
Confidence 88888877777777766555443
No 2
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.98 E-value=3.2e-30 Score=241.83 Aligned_cols=297 Identities=14% Similarity=0.087 Sum_probs=224.8
Q ss_pred CchHHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHH
Q 015396 38 LPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (407)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~ 117 (407)
.+|+.++.+++..++++++...+....|.+.+|+|.+..+ .|++.+++.+++.+++++.|+++||+|||+++..
T Consensus 5 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~------~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~ 78 (412)
T TIGR02332 5 LFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATM------FGLAATLFYAAYVICGIPSNIMLAIIGARRWIAG 78 (412)
T ss_pred ehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHH------HHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHH
Confidence 4566677888888899999999999999999999999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCC
Q 015396 118 GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (407)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 196 (407)
+.++.+++.+++++++|++.+++.|++.|++.+...+. ..++.|++|+++|++++++++.+..+|..+++++++++.+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~ 158 (412)
T TIGR02332 79 IMVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILAL 158 (412)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999888776 78899999999999999999999999999999999988741
Q ss_pred CCCCCCcccccccccCCCChhHHHHHHHHHHHH-HHHHhccccCCCCCCC-Ccchhhhhhhhhhhchhhhhhh--h-ccc
Q 015396 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHND-DDDSCDVSYDALESASAEVKEE--E-GRE 271 (407)
Q Consensus 197 ~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~-~~~ 271 (407)
.+ .....| ||..+.+.++..++. .+..+++||+|++.+. .+++++...+..+....+.++. . ++.
T Consensus 159 ~~-~~~~~g---------wr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (412)
T TIGR02332 159 DG-LMALKG---------WQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHA 228 (412)
T ss_pred CC-CCCccc---------hhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccc
Confidence 10 001234 555557777666553 4455677888754321 1111111111111111000000 0 000
Q ss_pred ----ccccccccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHH
Q 015396 272 ----ATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFL 347 (407)
Q Consensus 272 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l 347 (407)
...++.++ ++.++...+.+++.......+..++|.++.+. +.|++..+++.......++..++.+ +.+++
T Consensus 229 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~----~~~~s~~~~~~~~~~~~l~~~~g~l-~~g~l 302 (412)
T TIGR02332 229 AMPQRSMLREIF-TPAIMLYTLAYFCLTNTLSAINIWTPQILQSF----NQGSSNIMIGLLAAIPQFCTIFGMI-WWSRH 302 (412)
T ss_pred cccHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCCcHHHhHHHhhHHHHHHHHHHH-HHHHH
Confidence 11223333 57778777777777777778888999988652 1467788889999999999999985 89999
Q ss_pred HHHhchhHH
Q 015396 348 ERILGPIMV 356 (407)
Q Consensus 348 ~~~~~~~~~ 356 (407)
.||+++|+.
T Consensus 303 ~dr~~~r~~ 311 (412)
T TIGR02332 303 SDRLKERKH 311 (412)
T ss_pred hcccCccHH
Confidence 999987664
No 3
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.98 E-value=3.7e-30 Score=236.66 Aligned_cols=303 Identities=13% Similarity=0.042 Sum_probs=211.4
Q ss_pred hhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhcc
Q 015396 53 TALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS 132 (407)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~ 132 (407)
+......+.+.+|.+.+|+|+++++ .|++.+.+.+++.+++++.|+++||+|||+++..+......+.+.....
T Consensus 3 ~~~~~~~~~~~lp~i~~~~~~s~~~------~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~ 76 (368)
T TIGR00903 3 SQAIWVTFSPVLSLVAEDIDVSKEE------LGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDP 76 (368)
T ss_pred hhHHHHHHHhhHHHHHHHhCcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHh
Confidence 4455677889999999999999999 9999999999999999999999999999998776665555554433344
Q ss_pred chHHHHHHHHHHHhhhccchhHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcccccccccC
Q 015396 133 VNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGK 212 (407)
Q Consensus 133 ~~~~~l~~~r~l~G~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~~~~~ 212 (407)
++++.+++.|+++|++.+...+....++|++|+++|++++++.+.+..+|..+++++++++.+ .+|
T Consensus 77 ~~~~~l~~~R~l~G~g~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~-------~~g------- 142 (368)
T TIGR00903 77 FNYEWLLACQLLAALGQPFLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYT-------AGG------- 142 (368)
T ss_pred ccHHHHHHHHHHHHhHhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------ccc-------
Confidence 799999999999999988765567777999999999999999999999999999999999987 344
Q ss_pred CCChhHHHHHHHHHHHH-HHHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccccccccccccchhHHHHHHH
Q 015396 213 FPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVY 291 (407)
Q Consensus 213 ~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (407)
||..+++.++++++. ++..+++||+|+++++..+. + + ..+.++++++++.++...+.+
T Consensus 143 --Wr~~f~~~~~l~~~~~~~~~~~lp~~p~~~~~~~~~-~--------------~----~~~~~~~ll~~~~~~~~~~~~ 201 (368)
T TIGR00903 143 --LQLLIIPIAAVAAAGIILVLAALPALPFQAAEGFGF-K--------------D----AVKEFGALAGRKDLWIIGAIL 201 (368)
T ss_pred --hHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcch-H--------------H----HHHHHHHHHcChhHHHHHHHH
Confidence 555557766666554 44566788877543211100 0 0 001356788999999999999
Q ss_pred HHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhch---hHH-HHHHHHHHHHH
Q 015396 292 CVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP---IMV-ARIAGVLTIPL 367 (407)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~-~~~~~~~~~~~ 367 (407)
++.......+..+.|.|+.+ .|++.. .+.......+.+.++. +++.||..| |+. ......+.++.
T Consensus 202 ~~~~~~~~~~~~wlp~~L~~------~g~s~~-~~~~~~l~~~~g~~g~----~~~~d~~~r~~~r~~~~~~~~~~~a~~ 270 (368)
T TIGR00903 202 GFGVALFDNLAIWLEAALRP------AGLEDI-AGDAVALAILAGLIGV----AVIPDRVARAGLRSIYIRAAALLIAAF 270 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHH------CCCChH-HHHHHHHHHHHHHHHH----HHhhHHhhhhhhHHHHHHHHHHHHHHH
Confidence 99999999999999999965 456654 5666655555555554 445555432 333 32233333333
Q ss_pred HhhhhHHHhhhhhhhHhhhh------hhHHHHHHHhhcCCCCCCCC
Q 015396 368 LTSYPYIAMLSGFGLAFLLN------CASVVKNLLSSSGPGSKRSC 407 (407)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~p~~~rs~ 407 (407)
+..+..............+. ..+......+|.+|++.|++
T Consensus 271 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt 316 (368)
T TIGR00903 271 FLALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGK 316 (368)
T ss_pred HHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCc
Confidence 33333222111111111111 11234567889999998874
No 4
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.98 E-value=9.5e-30 Score=240.48 Aligned_cols=287 Identities=15% Similarity=0.120 Sum_probs=206.4
Q ss_pred chHHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcc---cccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHH
Q 015396 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQI---AKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVI 115 (407)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~ 115 (407)
+++.+...++..++++++...+....|.+.++++. +..+ . ...+.+.+...++..++++++|+++||+|||+++
T Consensus 20 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l 96 (432)
T PRK10406 20 RIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQ--L-LQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSM 96 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHH--H-HHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHH
Confidence 34445566678889999999999999999999864 3322 0 0123334455566669999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccchHH--------HHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHH
Q 015396 116 IMGTASVVIFNTLFGLSVNFW--------MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIG 186 (407)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 186 (407)
..+.++++++++++++++++. .+++.|+++|++.|...+. .++++|++|+++|++..++.+.+...|..++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~ 176 (432)
T PRK10406 97 LISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLA 176 (432)
T ss_pred HHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHH
Confidence 999999999999999988764 6899999999999887775 9999999999999999999988888888888
Q ss_pred HHhhhhhcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhh
Q 015396 187 PALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKE 266 (407)
Q Consensus 187 ~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (407)
+.+...+.....+ . ....++||.++++.++..++.+.....+||+++++. +..
T Consensus 177 ~~~~~~~~~~~~~-------~-~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~~------~~~------------- 229 (432)
T PRK10406 177 LLVVVVLQQTLED-------A-ELREWGWRIPFALGAVLAVVALWLRRQLDETSQQET------RAL------------- 229 (432)
T ss_pred HHHHHHHHHhCCH-------H-HHhccchHHHHHHHHHHHHHHHHHHhcCCCCchHHH------hhh-------------
Confidence 8776555421100 0 000356777778877776665554445566543210 000
Q ss_pred hhcccccccccccccchhHHHHHHHHHH-hhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHH
Q 015396 267 EEGREATPKKSLLKNWPLMSSIIVYCVF-SLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYP 345 (407)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~ 345 (407)
++..+.++++++++.+...+...+. ......+..++|.|+.+. +|++..+.+.......++..+++. +.+
T Consensus 230 ---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~-----~g~s~~~~~~~~~i~~~~~~i~~~-~~G 300 (432)
T PRK10406 230 ---KEAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNT-----AGMHANVASGIMTAALFVFMLIQP-LIG 300 (432)
T ss_pred ---cccccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 0112456677888777655544433 444556667788887654 688888888888888888888775 678
Q ss_pred HHHHHhchhHHHHHHHHHH
Q 015396 346 FLERILGPIMVARIAGVLT 364 (407)
Q Consensus 346 ~l~~~~~~~~~~~~~~~~~ 364 (407)
++.||++||+.+..+..+.
T Consensus 301 ~l~Dr~grr~~~~~~~~~~ 319 (432)
T PRK10406 301 ALSDKIGRRTSMLCFGSLA 319 (432)
T ss_pred HHHHHcCchHHHHHHHHHH
Confidence 9999999998877665544
No 5
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.97 E-value=5.7e-31 Score=232.07 Aligned_cols=306 Identities=18% Similarity=0.149 Sum_probs=247.3
Q ss_pred CCchHHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHH
Q 015396 37 GLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII 116 (407)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~ 116 (407)
+.+++.++.+++.+...++.+..+....|.+.++.++|.+| .|++.+.+.+.+.++..+.|.++||.+.|+.+.
T Consensus 25 ~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~------lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~ 98 (448)
T COG2271 25 RWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQ------LGILGSAFSITYGVSKFVMGVLSDRSNPRYFMA 98 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHhhhhcccCCCceeeh
Confidence 34455566788899999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccchHHHHHHHHHHHhhhccchhH-HHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhh--hhh
Q 015396 117 MGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG--GFL 193 (407)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~--~~l 193 (407)
+++++.++.+++++++++.+.+.+..++.|..+|...| +...++.|+++++||+..++++++.++|+.+.|++. +++
T Consensus 99 ~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~ 178 (448)
T COG2271 99 FGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFF 178 (448)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHH
Confidence 99999999999999999999999999999999999766 599999999999999999999999999999999999 788
Q ss_pred cCCCCCCCCcccccccccCCCChhHHHHHHHHHHH-HHHHHhccccCCCCCCCCcchhhhhhhhhhhc-hhhhhhhhccc
Q 015396 194 AQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFG-VTIAAFWLPETLHRHNDDDDSCDVSYDALESA-SAEVKEEEGRE 271 (407)
Q Consensus 194 ~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 271 (407)
.. +++|+..+++.++++++ .++.++.++|+|+...-++-++-.. +..+.. ++++.+.-...
T Consensus 179 ~~----------------~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~-d~~e~~~~~~~~~~ls~~ 241 (448)
T COG2271 179 AF----------------HGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRG-DPLEIYEEEKENEGLTAW 241 (448)
T ss_pred Hh----------------ccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhc-CchhhhhhhccCCCccHH
Confidence 76 34455555888877766 4555677788887643332211110 111111 00000001112
Q ss_pred ccccccccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHh
Q 015396 272 ATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL 351 (407)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 351 (407)
+.-.+.+++||.+|...+.+++....-.+...+.|.|+.+. .|+|..+++...+.+-++++.+.+ +.||++||.
T Consensus 242 ~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~-----k~~s~~~a~~a~~lfE~agl~G~L-l~GwlSDkl 315 (448)
T COG2271 242 QIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEV-----KGFSLVKANWAISLFEVAGLPGTL-LAGWLSDKL 315 (448)
T ss_pred HHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh-----cCCCHHHHHHHHHHHHHHhhHHHH-HHHHHHHHh
Confidence 23456789999999999999999999999999999999987 899999999999999999999996 899999985
Q ss_pred --chhHHHHHHHHHHHHHHhhh
Q 015396 352 --GPIMVARIAGVLTIPLLTSY 371 (407)
Q Consensus 352 --~~~~~~~~~~~~~~~~~~~~ 371 (407)
|||....+.+.+.....+..
T Consensus 316 fkgrR~p~~~i~~~~i~~~~~~ 337 (448)
T COG2271 316 FKGRRGPMALIFMLLITASLVL 337 (448)
T ss_pred cccccchHHHHHHHHHHHHHHH
Confidence 66766555555444444433
No 6
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.97 E-value=1.8e-29 Score=242.35 Aligned_cols=306 Identities=15% Similarity=0.113 Sum_probs=238.0
Q ss_pred hHHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHH
Q 015396 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (407)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (407)
|..+..+++..++..++..+++..+|.+.+++|.+.++ .+|+.+.+.++..++.+++|+++||+|||++++.+.
T Consensus 5 ~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~------~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~ 78 (495)
T PRK14995 5 WLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNE------LLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGG 78 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhH------HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 45566788899999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhc-cccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCC
Q 015396 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIF-REEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (407)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 197 (407)
+++.++++++++++|++.++++|+++|++.+...+. ...+.+.+ |+++|++++++......+|..+||.+++++.+
T Consensus 79 ~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~-- 156 (495)
T PRK14995 79 TLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLE-- 156 (495)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--
Confidence 999999999999999999999999999998887775 77776765 67999999999999999999999999999998
Q ss_pred CCCCCcccccccccCCCChhHHHHHHHHHHHHH-HHHhccccCCCCCCCCcchhhhhh---------hhhhhchh-----
Q 015396 198 EKYPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSY---------DALESASA----- 262 (407)
Q Consensus 198 ~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~---------~~~~~~~~----- 262 (407)
.+|||+.| ++.....++.+ +..+++||++++..++.+...... ...++..+
T Consensus 157 -----~~gwr~~f---------~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~ 222 (495)
T PRK14995 157 -----HFYWGSVF---------LINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSL 222 (495)
T ss_pred -----cCChHHHH---------HHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCch
Confidence 45555544 66655544433 345566775543222211111000 00000000
Q ss_pred -----------------hhhhhhcccccccccccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhH
Q 015396 263 -----------------EVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMV 325 (407)
Q Consensus 263 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~ 325 (407)
...|.+.+.+....+++|++.+....+..++......+...++|.|++.. +|+++.++
T Consensus 223 ~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v-----~g~s~~~a 297 (495)
T PRK14995 223 WVTSLTLLTGALLLGLFIRTQLAASRPMIDMRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFV-----HGLSPLEA 297 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCCHHHH
Confidence 01122223344456788999888877777777666666777788887766 79999999
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHHHHHhhhhH
Q 015396 326 GEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPY 373 (407)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (407)
|..+....++..++.. +.+++.||+++|+.+..+..+..++...+..
T Consensus 298 g~~~~~~~~~~~~~~~-~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~ 344 (495)
T PRK14995 298 GMFMLPVMVASGFSGP-IAGILVSRLGLRLVATGGMALSALSFYGLAM 344 (495)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHcCchHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999985 8899999999999888888777766655443
No 7
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.97 E-value=1e-30 Score=249.51 Aligned_cols=295 Identities=14% Similarity=0.075 Sum_probs=216.9
Q ss_pred HHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHH
Q 015396 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (407)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~ 122 (407)
+..+++.+++.+++...+.+..|.+.+++|.+..+ .|++.+++.+++.+++++.|+++||+|||+++..+.+++
T Consensus 31 ~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~------~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~ 104 (467)
T PRK09556 31 YLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTE------LGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILS 104 (467)
T ss_pred HHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHH
Confidence 33566777778889999999999999999999999 999999999999999999999999999999998888887
Q ss_pred HHHHHHhhc-----cchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCC
Q 015396 123 VIFNTLFGL-----SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (407)
Q Consensus 123 ~~~~~~~~~-----~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 196 (407)
+++.+..+. +++++.+++.|+++|++.+...+. .++++|++|+++|++++++...+.++|.++++.++.++.+.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~ 184 (467)
T PRK09556 105 AICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANY 184 (467)
T ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHh
Confidence 777665554 689999999999999998887775 89999999999999999999999999999999998776651
Q ss_pred CCCCCCcccccccccCCCChhHHHHHHHHHHHH-HHHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhccc-cc-
Q 015396 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGRE-AT- 273 (407)
Q Consensus 197 ~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~- 273 (407)
. + ..+|+..+.+.++..++. ++.+++.+++|++....++++ ...+... .+++..+.++.. ..
T Consensus 185 ~------~-------~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~ 249 (467)
T PRK09556 185 F------F-------DGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEE-IFGEPIS-EEDKETESTDMTKWQI 249 (467)
T ss_pred h------c-------cCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhh-cccCccc-hhhhccccccCcHHHH
Confidence 0 0 112444446655555443 333444566554322111110 0000000 000000000000 01
Q ss_pred ccccccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhch
Q 015396 274 PKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP 353 (407)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 353 (407)
..+..++++.++...+..++......+...+.|.|+.+. +|++..+.+.......++..++.. +.+++.||+++
T Consensus 250 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~-----~g~s~~~a~~~~~~~~~~~~ig~~-~~G~lsDr~g~ 323 (467)
T PRK09556 250 FVEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQE-----LGFSKEDAINTFTLFEIGALVGSL-LWGWLSDLANG 323 (467)
T ss_pred HHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCC
Confidence 122368899999988888887777777788899888765 789999999999989999999885 89999999999
Q ss_pred hHHHHHHHHHH
Q 015396 354 IMVARIAGVLT 364 (407)
Q Consensus 354 ~~~~~~~~~~~ 364 (407)
|+.........
T Consensus 324 r~~~~~~~~~~ 334 (467)
T PRK09556 324 RRALVACIALA 334 (467)
T ss_pred CchHHHHHHHH
Confidence 88766554433
No 8
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.97 E-value=9.8e-30 Score=248.92 Aligned_cols=191 Identities=19% Similarity=0.251 Sum_probs=166.3
Q ss_pred HHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHH
Q 015396 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (407)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~ 122 (407)
++.+.++.+...+....+...+|.+.+++|++..+ .+++.+++.++.+++++++|+++||+|||++++++.++.
T Consensus 169 ~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~------~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~ 242 (742)
T TIGR01299 169 FFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSG------KGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVN 242 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 34555666677777788889999999999999988 999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCC
Q 015396 123 VIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYP 201 (407)
Q Consensus 123 ~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~ 201 (407)
+++.++++++++++.++++|++.|++.|...+. .+++.|++|+++|++.+++...+..+|.++++.++..+..
T Consensus 243 ~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~------ 316 (742)
T TIGR01299 243 GFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIP------ 316 (742)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------
Confidence 999999999999999999999999998887775 9999999999999999999999999999999999988876
Q ss_pred Cccccccc----ccCCCChhHHHHHHHHHHHHHHHHhccccCCCCCCCC
Q 015396 202 NLFSSESL----FGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDD 246 (407)
Q Consensus 202 ~~~gw~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 246 (407)
.+||+.. +...+||+.+++.++..++.++..+++||+|++...+
T Consensus 317 -~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~ 364 (742)
T TIGR01299 317 -HYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLEN 364 (742)
T ss_pred -hccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHC
Confidence 5566532 2245788888888888877777788899999875433
No 9
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.97 E-value=3.9e-29 Score=234.84 Aligned_cols=343 Identities=14% Similarity=0.169 Sum_probs=233.6
Q ss_pred CCchHHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHH
Q 015396 37 GLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII 116 (407)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~ 116 (407)
+.+|+.+...++..+.+.++.....+..|.+.+++|.++.+ .+++.+++.++..+++++.|+++||+|||++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~------~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~ 81 (405)
T TIGR00891 8 RAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVD------AASLISAALISRWFGALMFGLWGDRYGRRLPMV 81 (405)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhh------HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 45567777888999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 117 MGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
.+.++.+++.++++++++++.+++.|++.|++.+...+. .+++.|++|+++|++++++.+.+..+|..+++.+++.+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~ 161 (405)
T TIGR00891 82 TSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVP 161 (405)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998887775 9999999999999999999999999999999999999886
Q ss_pred CCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhccccCCCCCCCCcchhhhhhhhhhhchhhh---hhhhcccc
Q 015396 196 PAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEV---KEEEGREA 272 (407)
Q Consensus 196 ~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 272 (407)
..+ .+|+..+.+.++..++.++....+||++++.++++++++ ..+..++..... ++..++..
T Consensus 162 -------~~~-------~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 226 (405)
T TIGR00891 162 -------VWG-------DGWRALFFISILPIIFALWLRKNIPEAEDWKEKHAGKAL-VRTMVDILYGGEHRIANIVMTLA 226 (405)
T ss_pred -------hcC-------ccHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHhhhhhh-hhhHHHHHhccchhhhhhhhhhh
Confidence 222 125555566666555555555667776543221111100 000000000000 00000000
Q ss_pred ccccccc-ccch-hHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 015396 273 TPKKSLL-KNWP-LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI 350 (407)
Q Consensus 273 ~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 350 (407)
...++.. +++. +........+..........++|.|..+. +|++..+.+.+....+++..++.. +.+++.||
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~s~~~~~~~~~~~~~~~~~g~~-~~g~l~dr 300 (405)
T TIGR00891 227 AAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKAD-----LGLSPHTVANIVVFSNIGAIVGGC-VFGFLGDW 300 (405)
T ss_pred HHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHH-----hCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 0001111 1111 12222222233333334445566666544 788999999999999999999985 88999999
Q ss_pred hchhHHHHHHHHHHHHHHhhhhHHH-hhhhhhhH-h-----hhhhhHHHHHHHhhcCCCCCCC
Q 015396 351 LGPIMVARIAGVLTIPLLTSYPYIA-MLSGFGLA-F-----LLNCASVVKNLLSSSGPGSKRS 406 (407)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~-----~~~~~~~~~~~~~~~~p~~~rs 406 (407)
+++|+.+..+.....+......... ........ . .............+.+|++.|+
T Consensus 301 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (405)
T TIGR00891 301 LGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRA 363 (405)
T ss_pred hCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhH
Confidence 9999988877665533322211111 11110110 0 1111223456678888888775
No 10
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.97 E-value=2.8e-29 Score=237.41 Aligned_cols=330 Identities=17% Similarity=0.250 Sum_probs=232.0
Q ss_pred CchHHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHH
Q 015396 38 LPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (407)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~ 117 (407)
.+++.+...++..+.+.++.....+..|.+.+++|.++.+ .+++.+++.++..+++++.|+++||+|||+++..
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~------~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~ 88 (426)
T PRK12307 15 PQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDME------GAFLATAAFIGRPFGGALFGLLADKFGRKPLMMW 88 (426)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHH
Confidence 3445566777888888899999999999999999999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCC
Q 015396 118 GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (407)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 196 (407)
+.++.+++.++++++++++.++++|+++|++.+...+. ..++.|++|+++|++++++...+..+|.++++.+.+.+.+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~- 167 (426)
T PRK12307 89 SIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAE- 167 (426)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcc-
Confidence 99999999999999999999999999999998877765 8999999999999999999999999999999999998887
Q ss_pred CCCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccccccc
Q 015396 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKK 276 (407)
Q Consensus 197 ~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (407)
.+|||+ .+++..+..++.+......||++++.+++.+ ...++.++..+......+
T Consensus 168 ------~~~w~~---------~f~i~~~~~~~~~~~~~~~p~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~ 222 (426)
T PRK12307 168 ------AYGWRA---------AFFVGLLPVLLVIYIRARAPESKEWEEAKLS----------GKGKHSQSAWSVFSLSMK 222 (426)
T ss_pred ------cCCHHH---------HHHHHHHHHHHHHHHHHHCCCChHHHHhhhh----------ccccccccchhhhhHHHH
Confidence 444544 4455443333222222223443221110000 000000000011122456
Q ss_pred cccccchhHHHHHHHHH---HhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhch
Q 015396 277 SLLKNWPLMSSIIVYCV---FSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP 353 (407)
Q Consensus 277 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 353 (407)
++++++.++.......+ ..........++|.|..+ .|+++.+.+.+.+...++.++++. +.+++.||+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~~g~~-~~g~l~dr~~~ 295 (426)
T PRK12307 223 GLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAG------EGFDTGVVSNLMTAAAFGTVLGNI-VWGLCADRIGL 295 (426)
T ss_pred HHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcc
Confidence 67788777654433222 222222345567777654 578888999999999999999985 88999999999
Q ss_pred hHHHHHHHHHHHHHHhhhhHHHhhhhhhh-Hhhh-------hhhHHHHHHHhhcCCCCCCC
Q 015396 354 IMVARIAGVLTIPLLTSYPYIAMLSGFGL-AFLL-------NCASVVKNLLSSSGPGSKRS 406 (407)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~~~~~~p~~~rs 406 (407)
|+....+.++..+..+............. ...+ +..........+.+|++.|+
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g 356 (426)
T PRK12307 296 KKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRG 356 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHh
Confidence 99888887776655544332221111111 1111 11223445667888887665
No 11
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.97 E-value=8.3e-29 Score=232.68 Aligned_cols=321 Identities=17% Similarity=0.121 Sum_probs=232.3
Q ss_pred CchHHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHH
Q 015396 38 LPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (407)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~ 117 (407)
.+|..+...+...+.+.++.....+..|.+.+++|.++++ .+++.+.+.++..+++++.|+++||+|||+++..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 85 (406)
T PRK11551 12 RLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQ------MGWAFSAGILGLLPGALLGGRLADRIGRKRILIV 85 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHH
Confidence 4555666777888888999999999999999999999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCC
Q 015396 118 GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (407)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 196 (407)
+.++..++.+++.++++++.+++.|++.|++.+...+. .+++.|++|+++|++++++.+.+..+|..+++.+++.+.+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~- 164 (406)
T PRK11551 86 SVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAG- 164 (406)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-
Confidence 99999999999999999999999999999998887775 8999999999999999999999999999999999988877
Q ss_pred CCCCCCcccccccccCCCChhHHHHHHHHHHHHH-HHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhccccccc
Q 015396 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPK 275 (407)
Q Consensus 197 ~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (407)
..+|+..+++.++..++.. +...++||++++.++++++++.. ...
T Consensus 165 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-------------------~~~ 210 (406)
T PRK11551 165 ---------------DAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQRA-------------------PVL 210 (406)
T ss_pred ---------------ccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhhh-------------------hhH
Confidence 3445555566665544433 34456787664322211100000 000
Q ss_pred cccc---ccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhc
Q 015396 276 KSLL---KNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG 352 (407)
Q Consensus 276 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 352 (407)
+..+ +.+..+......++..........+.|.+..+ .|++..+.+......+++..+++. +.+++.||++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~------~g~s~~~~~~~~~~~~~~~~~~~~-~~g~l~dr~g 283 (406)
T PRK11551 211 RALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVG------QGLSRSQAGLVQIAFNIGGALGSL-LIGALMDRLR 283 (406)
T ss_pred HHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------CCCChhhhhHHHHHHHHHHHHHHH-HHHHHHHHHh
Confidence 0111 11222233333333333344455567777654 688999999999999999999985 8899999999
Q ss_pred hhHHHHHHHHHHHHHHhhhhHHHhhhhhhhH-hhhh-----hhHHHHHHHhhcCCCCCCC
Q 015396 353 PIMVARIAGVLTIPLLTSYPYIAMLSGFGLA-FLLN-----CASVVKNLLSSSGPGSKRS 406 (407)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~p~~~rs 406 (407)
+++.+..+.....++++.+...+........ ...+ ..........+.+|++.|+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g 343 (406)
T PRK11551 284 PRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRG 343 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhh
Confidence 9998887666655555544333322111111 1111 1123445678888888775
No 12
>PRK03545 putative arabinose transporter; Provisional
Probab=99.97 E-value=7.7e-29 Score=231.45 Aligned_cols=274 Identities=15% Similarity=0.147 Sum_probs=208.6
Q ss_pred hHHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHH
Q 015396 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (407)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (407)
|..++.+.+..+..........+.+|.+.+++|.++++ .|++.+.+.+++.+++++.|+++||+|||+++..+.
T Consensus 8 ~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~------~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 81 (390)
T PRK03545 8 WLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQ------VGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLF 81 (390)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHH
Confidence 34445555555554444455667789999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCC
Q 015396 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (407)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 198 (407)
++..++++.+++++|++.+++.|+++|++.+...+. .+++.|++|+++|++++++...+.++|..++|++++.+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~--- 158 (390)
T PRK03545 82 VLFIASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQ--- 158 (390)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHH---
Confidence 999999999999999999999999999998887775 8999999999999999999999999999999999999987
Q ss_pred CCCCcccccccccCCCChhHHHHHHHHHHHHHHH-HhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhccccccccc
Q 015396 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKS 277 (407)
Q Consensus 199 ~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (407)
.+| |+..+.+.++..++..+. ...+||.+++++ + + .++.++
T Consensus 159 ----~~g---------w~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~---~--~--------------------~~~~~~ 200 (390)
T PRK03545 159 ----YLG---------WRTTFLAIGGGALITLLLLIKLLPLLPSEHS---G--S--------------------LKSLPL 200 (390)
T ss_pred ----Hhc---------HHHHHHHHHHHHHHHHHHHHHhCCCCCCCCc---c--h--------------------HHHHHH
Confidence 344 455557777666554433 344565432110 0 0 012345
Q ss_pred ccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHH
Q 015396 278 LLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVA 357 (407)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 357 (407)
.++++.++......++..........+.+.++.+. .|++..+.+.+....+++.++++. ..+++.||+++|...
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~g~s~~~~~~~~~~~~~~~~~g~~-~~g~l~dr~~~~~~~ 274 (390)
T PRK03545 201 LFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQV-----AGLSENFATLLLLLFGGAGIIGSV-LFSRLGNRHPSGFLL 274 (390)
T ss_pred HHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCccHHHHHHHHHHHHHHHHHH-HHHHHhhccchhHHH
Confidence 77888877665555554444444444555555443 688899999999999999999985 889999999887654
Q ss_pred HHHHHHHHHH
Q 015396 358 RIAGVLTIPL 367 (407)
Q Consensus 358 ~~~~~~~~~~ 367 (407)
.+..+..+.
T Consensus 275 -~~~~~~~~~ 283 (390)
T PRK03545 275 -IAIALLLVC 283 (390)
T ss_pred -HHHHHHHHH
Confidence 343333333
No 13
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.97 E-value=9.6e-29 Score=237.10 Aligned_cols=341 Identities=14% Similarity=0.108 Sum_probs=222.3
Q ss_pred HHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHH-HHHHHHHHHHHhhhhhhhcccccCChHHHHHHH
Q 015396 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGY-VGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (407)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~-~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (407)
+.+....+..+++.++...+....|.+.++++.+.++. ......+ ..++..+++.+++++.|+++||+|||+++.++.
T Consensus 16 ~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 16 KAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPS-VQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 44556778899999999999999999999987654331 0110111 257788999999999999999999999999999
Q ss_pred HHHHHHHHHhhccchHHH--------HHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhh
Q 015396 120 ASVVIFNTLFGLSVNFWM--------AVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (407)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~--------l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 190 (407)
++++++++++++++|++. +++.|+++|++.|...+. .++++|++|+++|++..++...+..+|..+++.+.
T Consensus 95 ~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~ 174 (490)
T PRK10642 95 VIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVV 174 (490)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999864 899999999998887775 99999999999999999999988888888888776
Q ss_pred hhhcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcc
Q 015396 191 GFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGR 270 (407)
Q Consensus 191 ~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (407)
..+.....+ . ....++||.++++.++..++.++....+||+|++...+++.++. .++. .++.
T Consensus 175 ~~~~~~~~~-------~-~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~--------~~~~--~~~~ 236 (490)
T PRK10642 175 VLISTIVGE-------A-NFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQG--------DREG--LQDG 236 (490)
T ss_pred HHHHHhcCH-------H-HhcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhh--------cccc--cccc
Confidence 555321100 0 00035566666877666665555556788876643211100000 0000 0001
Q ss_pred ccccccccccc-chhHH-HHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHH
Q 015396 271 EATPKKSLLKN-WPLMS-SIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLE 348 (407)
Q Consensus 271 ~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~ 348 (407)
.+.++++++++ ++.+. .....++..........+.|.|+... +|++..+.+.......++..++.. +.+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-----~g~s~~~~~~~~~~~~~~~~~~~~-~~g~l~ 310 (490)
T PRK10642 237 PKVSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHN-----LHYSEDHGVLIIIAIMIGMLFVQP-VMGLLS 310 (490)
T ss_pred ccCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 12234444442 22222 22222333344555666788777554 677777777777777777888774 889999
Q ss_pred HHhchhHHHHHHHHHHHHHHhh-hhHHHh--hhhhhhH-hhh-----hhhHHHHHHHhhcCCCCCCC
Q 015396 349 RILGPIMVARIAGVLTIPLLTS-YPYIAM--LSGFGLA-FLL-----NCASVVKNLLSSSGPGSKRS 406 (407)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~-~~~-----~~~~~~~~~~~~~~p~~~rs 406 (407)
||+|||+.+..+.+...+.... +..... ....... +.. ...+.......+.+|++.|+
T Consensus 311 dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg 377 (490)
T PRK10642 311 DRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRY 377 (490)
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccch
Confidence 9999999887776543322221 111111 1111111 111 11223455677899999886
No 14
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.97 E-value=2.3e-29 Score=235.37 Aligned_cols=278 Identities=17% Similarity=0.157 Sum_probs=217.8
Q ss_pred HHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHh
Q 015396 50 VLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF 129 (407)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~ 129 (407)
.++..++...+....|.+.+++|.++.+ .+++.+++.++..+++++.|+++||+|||+++..+.++..++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~ 76 (399)
T TIGR00893 3 TVINYLDRANLSFAAPMLQEDLGLSAAQ------YGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQ 76 (399)
T ss_pred ehHHHHHHHhhhHhHHHHHHhhCCChhh------HHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHH
Confidence 3456677788888999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred hccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcccccc
Q 015396 130 GLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSES 208 (407)
Q Consensus 130 ~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~ 208 (407)
+++++++.+++.|++.|++.+...+. ..++.|++|+++|++++++.+....+|..++|.+++.+.+
T Consensus 77 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~------------- 143 (399)
T TIGR00893 77 AFAGAYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILI------------- 143 (399)
T ss_pred HHHcCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH-------------
Confidence 99999999999999999998887775 9999999999999999999999999999999999999887
Q ss_pred cccCCCChhHHHHHHHHHHHHHHH-HhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccccccccccccchhHHH
Q 015396 209 LFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSS 287 (407)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (407)
..+|+..+.+.++..++..+. .+..||++++.+..+++++....+....+.+.++++++.+...++.+++++++..
T Consensus 144 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (399)
T TIGR00893 144 ---HFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGL 220 (399)
T ss_pred ---hCCchHHHHHHHHHHHHHHHHhhheecCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHH
Confidence 444555557766665554443 4455665543222111111100000000001111122233456678889999988
Q ss_pred HHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhH
Q 015396 288 IIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIM 355 (407)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 355 (407)
.+..++..........+.|.|..+. +|.+..+.+.+.....++..++.. +.+++.||+++|+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~ 282 (399)
T TIGR00893 221 ALGQFLVNIGLGFFLTWFPTYLVQE-----RGLSILEAGFMASLPGIVGFIGMI-LGGRLSDLLLRRG 282 (399)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHH-----hcccHHHhhHHHHHHHHHHHHHHH-HHHHHHHHHhhcc
Confidence 8888888888888888888888765 788899999999999999999885 8899999999885
No 15
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.97 E-value=2.9e-28 Score=227.40 Aligned_cols=285 Identities=18% Similarity=0.185 Sum_probs=223.7
Q ss_pred HHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHH
Q 015396 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (407)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (407)
+....+....+....+.....|.+|.+.+++|.++++ .+++.+++.++..+++++.|+++||+|||+++..+.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~ 78 (385)
T TIGR00710 5 AFALLLGCLSILGPLGIDMYLPAFPEIAADLSTPASI------VQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLF 78 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHH
Confidence 3444555556667778889999999999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCC
Q 015396 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (407)
Q Consensus 121 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 199 (407)
+..++.+.+.++++++.+++.|++.|++.+...+. .+++.|++|+++|++++++.+....+|..++|.+++.+.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~---- 154 (385)
T TIGR00710 79 IFALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILV---- 154 (385)
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----
Confidence 99999999999999999999999999998887775 9999999999999999999999999999999999999987
Q ss_pred CCCcccccccccCCCChhHHHHHHHHHHHHHHH-HhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccccccccc
Q 015396 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSL 278 (407)
Q Consensus 200 ~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (407)
.++|+..+.+.++..++..+. .+..||+++++++++. ++ ..+..++.
T Consensus 155 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-------------------~~~~~~~~ 202 (385)
T TIGR00710 155 ------------WLSWHAIFAFLSLAGILLSALIFFILPETLPYEARIQI-ST-------------------YFETFLLL 202 (385)
T ss_pred ------------HcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcccCCH-HH-------------------HHHHHHHH
Confidence 344555556666655554333 4456665433221100 00 01134566
Q ss_pred cccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHH
Q 015396 279 LKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 358 (407)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 358 (407)
+++++++...+...+..........+.|.+..+. +|+++.+.+.+.....++..++.. +.+++.||+++|+.+.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~g~~~~~~~~~~~~~~~-~~g~l~~~~~~~~~~~ 276 (385)
T TIGR00710 203 LKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDI-----MGVSPSVFGLLFALNIIAMIFGGF-LNGRFIKKWGAKSLLR 276 (385)
T ss_pred HcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCHHHHHH
Confidence 7888888776666555555555555566665533 788999999999999999998885 8899999999999888
Q ss_pred HHHHHHHHHHhhhhH
Q 015396 359 IAGVLTIPLLTSYPY 373 (407)
Q Consensus 359 ~~~~~~~~~~~~~~~ 373 (407)
.+..+..++..++..
T Consensus 277 ~~~~~~~~~~~~~~~ 291 (385)
T TIGR00710 277 MGLILFAVSAVLLEI 291 (385)
T ss_pred HHHHHHHHHHHHHHH
Confidence 877776666555443
No 16
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.97 E-value=7e-28 Score=224.68 Aligned_cols=266 Identities=18% Similarity=0.178 Sum_probs=204.2
Q ss_pred chHHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHH
Q 015396 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (407)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~ 118 (407)
.|+.+..+....+..........+.+|.+.+++|.++++ .++..+++.++..+++++.|+++||+|||+.+..+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~ 91 (394)
T PRK10213 18 NWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGV------AGQSVTVTAFVAMFASLFITQTIQATDRRYVVILF 91 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHH
Confidence 455555555555555555556677889999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCC
Q 015396 119 TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (407)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 197 (407)
.++.+++.+++.++++++.+++.|+++|++.+...+. .+++.|++|+++|++++++...+.++|..++|.+++++.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~-- 169 (394)
T PRK10213 92 AVLLTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGE-- 169 (394)
T ss_pred HHHHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 9999999999999999999999999999998887775 8999999999999999999999999999999999999998
Q ss_pred CCCCCcccccccccCCCChhHHHHHHHHHHHHHHH-HhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccccccc
Q 015396 198 EKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKK 276 (407)
Q Consensus 198 ~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (407)
.+|| +..+++.++..++..+. ...+||+++++++ .....+
T Consensus 170 -----~~gw---------~~~f~~~~~l~~~~~l~~~~~~p~~~~~~~~-------------------------~~~~~~ 210 (394)
T PRK10213 170 -----LIGW---------RNVFNAAAVMGVLCIFWIIKSLPSLPGEPSH-------------------------QKQNTF 210 (394)
T ss_pred -----hcCH---------HHHHHHHHHHHHHHHHHHHHHCCCCCccccc-------------------------chhHHH
Confidence 4444 44446666555543333 3345654321100 001234
Q ss_pred cccccchhHHHHHHHHHHhhccchhhhHH-hhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhH
Q 015396 277 SLLKNWPLMSSIIVYCVFSLHDMAYSEIF-SLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIM 355 (407)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 355 (407)
+.+++|.++...+..++..........+. |.|..+ +|++..+.+..+...+++..++.. +.+++.||.+++.
T Consensus 211 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~------~g~s~~~~g~~~~~~~~~~iig~~-~~~~l~~r~~~~~ 283 (394)
T PRK10213 211 RLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNL------AGFGVDGLTLVLLSFGIASFVGTS-LSSFILKRSVKLA 283 (394)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------cCCChhHHHHHHHHHHHHHHHHHH-HHHHHHhccchhH
Confidence 56788888877666555555444444454 555443 788999999999999999999985 8888888855443
Q ss_pred HHH
Q 015396 356 VAR 358 (407)
Q Consensus 356 ~~~ 358 (407)
...
T Consensus 284 l~~ 286 (394)
T PRK10213 284 LAG 286 (394)
T ss_pred HHH
Confidence 333
No 17
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.97 E-value=3.6e-28 Score=233.82 Aligned_cols=303 Identities=16% Similarity=0.201 Sum_probs=236.1
Q ss_pred HHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHH
Q 015396 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (407)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~ 121 (407)
.+..+++..++..++.....+.+|.+.+++|.+.++ .+++.+.+.++..++.++.|+++||+|||++++.+.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 76 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQ------VQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFA 76 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhh------hhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHH
Confidence 345667788888899999999999999999999998 99999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCC
Q 015396 122 VVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY 200 (407)
Q Consensus 122 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 200 (407)
..++.++++.+++++.+++.|+++|++.+...+. .+++.|++|+++|+++++++.....+|..++|.+++++.+
T Consensus 77 ~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~----- 151 (485)
T TIGR00711 77 FTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIE----- 151 (485)
T ss_pred HHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhcc-----
Confidence 9999999999999999999999999998887775 9999999999999999999999999999999999999988
Q ss_pred CCcccccccccCCCChhHHHHHHHHHHHHH-HHHhccccCCCCCCCCcchhhhhh---------hhhhhchh--------
Q 015396 201 PNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSY---------DALESASA-------- 262 (407)
Q Consensus 201 ~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~---------~~~~~~~~-------- 262 (407)
..|||+.| ++.+...++.. +..+.+||+++...++.+...... ....+.++
T Consensus 152 --~~~w~~~f---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (485)
T TIGR00711 152 --NYHWRWIF---------LINVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNE 220 (485)
T ss_pred --CcCceehh---------hhhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchH
Confidence 45565555 55555544433 334455664432222111110000 00000000
Q ss_pred ---------------hhhhhhcccccccccccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHH
Q 015396 263 ---------------EVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGE 327 (407)
Q Consensus 263 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~ 327 (407)
..+|.+++++....++++++.++...+..++..........+.|.|+++. +|+++.+.+.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-----~g~s~~~~g~ 295 (485)
T TIGR00711 221 ILILSITGLVAIIAFVVWELTDDNPLVDLRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQV-----LGYTALQAGL 295 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCccCHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHH
Confidence 00111222333345678889888888877777777777777888888765 7899999999
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHHHHHhhhh
Q 015396 328 VLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYP 372 (407)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (407)
......++..++.. +.+++.||+++|+.+..+..+..++...+.
T Consensus 296 ~~~~~~~~~~~~~~-~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~ 339 (485)
T TIGR00711 296 HILPVGLAPMLSSP-IAGRMGDKIDPRKLVTIGLILYAVGFYWRA 339 (485)
T ss_pred HHHHHHHHHHHHHH-HHHHHHhhcCcHHHHHHHHHHHHHHHHHHh
Confidence 99999999999885 889999999999998888877777766554
No 18
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.97 E-value=1.1e-28 Score=233.30 Aligned_cols=280 Identities=16% Similarity=0.175 Sum_probs=212.5
Q ss_pred HHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHH
Q 015396 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (407)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (407)
+.....++..+..++....+.+.+|.+.+++|.+..+ .|++.+.+.++..+++++.|+++||+|||+++.++.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~ 96 (434)
T PRK11663 23 HILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSD------IGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLI 96 (434)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHH
Confidence 3444566677777777788889999999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCC
Q 015396 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (407)
Q Consensus 121 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 199 (407)
+.+++.++++++++++.+++.|++.|++.|...+. .+++.|++|+++|++++++.+.+.++|..++|.+++++.+
T Consensus 97 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~---- 172 (434)
T PRK11663 97 ATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIAL---- 172 (434)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----
Confidence 99999999999999999999999999988876664 8999999999999999999999999999999999999987
Q ss_pred CCCcccccccccCCCChhHHHHHHHHHHHH-HHHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccccc-c-c
Q 015396 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATP-K-K 276 (407)
Q Consensus 200 ~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~ 276 (407)
.++|+..+.+.++..++. ++..+++||+|++...++..+.+. +. .+..++ ++.+...... . .
T Consensus 173 ------------~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~-~~~~~~-~~~~~~~~~~~~~~ 237 (434)
T PRK11663 173 ------------HYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRH-DA-LELAQQ-QEGAGLSRKEILTK 237 (434)
T ss_pred ------------cccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccc-cc-cccchh-ccccCCChhhhHHH
Confidence 344555557666655443 334456677654322111000000 00 000000 0000000111 1 1
Q ss_pred cccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHh
Q 015396 277 SLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL 351 (407)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 351 (407)
..++++.++...+..++..........++|.|+.+. +|++..+.+...+...++..++.. +.+++.||+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-----~g~s~~~a~~~~~~~~~~~~~g~~-~~g~l~dr~ 306 (434)
T PRK11663 238 YVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSET-----LGVDLVTANSAVSMFELGGFIGAL-VAGWGSDKL 306 (434)
T ss_pred HHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHH-HHhhhHHHh
Confidence 256788888877777776666667777888888554 789999999999999999999985 889999998
No 19
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.97 E-value=9.8e-29 Score=229.69 Aligned_cols=313 Identities=14% Similarity=0.100 Sum_probs=223.6
Q ss_pred HHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHH
Q 015396 46 IWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIF 125 (407)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~ 125 (407)
......+.........+..|.+.+++|.++++ .|++.+++.++..+++++.|+++||+|||+++..+.++.+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~ 81 (377)
T TIGR00890 8 GTVIMCFTSGYVYTWTLLAPPLGRYFGVGVTA------VAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLG 81 (377)
T ss_pred HHHHHHHHhhHHhhhhhHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHH
Confidence 33333334444667788999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcc
Q 015396 126 NTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLF 204 (407)
Q Consensus 126 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~ 204 (407)
.+.++++++++.+++.|++.|++.+...+. ...+.|++| ++|+++.++...+.++|..+++++.+.+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--------- 151 (377)
T TIGR00890 82 FTFYAIADSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVIN--------- 151 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHh---------
Confidence 999999999999999999999998876554 778888887 679999999999999999887777777666
Q ss_pred cccccccCCCChhHHHHHHHHHHHHHHH-HhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccccccccccccch
Q 015396 205 SSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWP 283 (407)
Q Consensus 205 gw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (407)
.++|+..+.+.++..++..+. .+++++++++..+++++.+ +.....++.++++.
T Consensus 152 -------~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~ 206 (377)
T TIGR00890 152 -------LEGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQLIKTNIEVS------------------VKDYTVWEMLRTPQ 206 (377)
T ss_pred -------cccHHHHHHHHHHHHHHHHHHHHHheecCchhccccCcccc------------------hhhhhHHHHHcCcc
Confidence 334555557777766655443 3445543322111100000 01113345677888
Q ss_pred hHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHH
Q 015396 284 LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVL 363 (407)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 363 (407)
++...+..++..........+.+.|.++ +|.+..+.+...+...++..+++. ..+++.||++||+.+..+..+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~-~~g~l~dr~g~~~~~~~~~~~ 279 (377)
T TIGR00890 207 FWVLYLSFFLNAVSGLLLIGLYKPYGQS------LGLSDGFLVLAVSISSIFNGGGRP-FLGALSDKIGRQKTMSIVFGI 279 (377)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhhhhhhHHHHH
Confidence 8777666665555544444455555433 678888889999999999999885 889999999999998888877
Q ss_pred HHHHHhhhhHHHhhhhhhh---Hhhhh-----hhHHHHHHHhhcCCCCCCC
Q 015396 364 TIPLLTSYPYIAMLSGFGL---AFLLN-----CASVVKNLLSSSGPGSKRS 406 (407)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~---~~~~~-----~~~~~~~~~~~~~p~~~rs 406 (407)
..++...+.+.+....... ....+ ..........+.+|++.|+
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~ 330 (377)
T TIGR00890 280 SAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSA 330 (377)
T ss_pred HHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhh
Confidence 7777665544432211111 01111 1112345677888888775
No 20
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.97 E-value=1.2e-28 Score=228.08 Aligned_cols=288 Identities=16% Similarity=0.119 Sum_probs=221.2
Q ss_pred HHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHH
Q 015396 46 IWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIF 125 (407)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~ 125 (407)
+....++..++.....+.+|.+..+++.++.+ .+++.+++.++..+++++.|+++||+|||+++..+.++..++
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~ 77 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLAGTGSASV------LSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVL 77 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccHHH------HHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHH
Confidence 45667778888888999999999999999988 999999999999999999999999999999999999998888
Q ss_pred HHHhhccc-----hHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCC
Q 015396 126 NTLFGLSV-----NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (407)
Q Consensus 126 ~~~~~~~~-----~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 199 (407)
.++..+.+ +++.+++.|++.|++.+...+. .+++.|++|+++|++++++.+....+|..++|.+++.+.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~---- 153 (365)
T TIGR00900 78 VAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYA---- 153 (365)
T ss_pred HHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH----
Confidence 88887777 9999999999999999888886 9999999999999999999999999999999999999987
Q ss_pred CCCcccccccccCCCChhHHHHHHHHHHHHHHHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhccccccccccc
Q 015396 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLL 279 (407)
Q Consensus 200 ~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (407)
.++|+..+++.++..++..+..+.++++++..+++++.+++. .++.....+.++
T Consensus 154 ------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~ 207 (365)
T TIGR00900 154 ------------TLGIKWAIWVDAVGFAISALLIVSVRIPELAASEIQALSNAV--------------LRDTREGIKFVL 207 (365)
T ss_pred ------------HhhHHHHHHHHHHHHHHHHHHHHhcccccCCCccccccchhH--------------HHHHHhHHHHHH
Confidence 344555556666655554444333322211111111000000 000112345677
Q ss_pred ccchhHHHHHHHHHHhhccchhh-hHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHH
Q 015396 280 KNWPLMSSIIVYCVFSLHDMAYS-EIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 358 (407)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 358 (407)
++|.++...+..++......... .+.|.|..+. +|.+..+.+......+++..++.. +.+++.||.++++.+.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~ 281 (365)
T TIGR00900 208 KNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKY-----LGRGSTHYGWVLAAFGLGALLGAL-LLGLLGRYFKRMALMT 281 (365)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH-----hCCchHHHHHHHHHHHHHHHHHHH-HHHHHHHHhchhHHHH
Confidence 88888877777666665554444 6677776554 688899999999999999999885 7789999999999888
Q ss_pred HHHHHHHHHHhhhhHHH
Q 015396 359 IAGVLTIPLLTSYPYIA 375 (407)
Q Consensus 359 ~~~~~~~~~~~~~~~~~ 375 (407)
.+..+..+.+....+..
T Consensus 282 ~~~~~~~~~~~~~~~~~ 298 (365)
T TIGR00900 282 GAIFVIGLAILVVGLTP 298 (365)
T ss_pred HHHHHHHHHHHHHHhhc
Confidence 87766666666555443
No 21
>PRK10133 L-fucose transporter; Provisional
Probab=99.97 E-value=6.2e-28 Score=227.46 Aligned_cols=302 Identities=15% Similarity=0.140 Sum_probs=225.0
Q ss_pred chHHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHH
Q 015396 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (407)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~ 118 (407)
....+..+....+...+......+..|.+++++|.++.+ .|+..+.+.+++.+++++.|+++||+|||+++..+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~------~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g 97 (438)
T PRK10133 24 YIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQ------AGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITG 97 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 344556677777888888899999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh---hccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhc
Q 015396 119 TASVVIFNTLF---GLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (407)
Q Consensus 119 ~~~~~~~~~~~---~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 194 (407)
.++..++.+++ ..+++++.++++|+++|++.|...+. ++++.|+.|+++|.+.+++.+....+|..++|.+++.+.
T Consensus 98 ~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 98 LFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999875 46889999999999999999888775 888899877777777899999999999999999988765
Q ss_pred CCCCC-----------CCCcccccccccCCCChhHHHHHH-HHHHHHHHH-HhccccCCCCCCCCcchhhhhhhhhhhch
Q 015396 195 QPAEK-----------YPNLFSSESLFGKFPYFLPCLCIS-LFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESAS 261 (407)
Q Consensus 195 ~~~~~-----------~~~~~gw~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 261 (407)
....+ .....+||..+ -.+|+.+++... +..++.++. ...+||.+.+++ ++ +.
T Consensus 178 ~~~~~~~~~~~~~~l~~~~~~~w~~~~-~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~--~~--~~--------- 243 (438)
T PRK10133 178 LSNVPHQSQDVLDKMTPEQLSAYKHSL-VLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNH--SD--AK--------- 243 (438)
T ss_pred hcCCcccchhhhhccChhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc--cc--cc---------
Confidence 21100 00012566554 456787776433 333232222 233444221100 00 00
Q ss_pred hhhhhhhcccccccccccccchhHHHHHHHHHHhhccchhhhHHhhhc-cCCCccCccccchhhHHHHHHHHHHHHHHHH
Q 015396 262 AEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWA-NSPKKLGGLNYSTQMVGEVLAITGFSLLVFQ 340 (407)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~ 340 (407)
+.+.....++++++|.++...+..++..........+.+.|+ ++. +|+++.+++..+....++..+++
T Consensus 244 ------~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~-----~g~s~~~ag~~~~~~~~~~~vG~ 312 (438)
T PRK10133 244 ------QGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEI-----PGMTAGFAANYLTGTMVCFFIGR 312 (438)
T ss_pred ------ccchhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 000112345678889888777766666666666666777664 333 79999999999999999999998
Q ss_pred HhHHHHHHHHhchhHHHHHHHHHHHHHHhhhh
Q 015396 341 LSLYPFLERILGPIMVARIAGVLTIPLLTSYP 372 (407)
Q Consensus 341 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (407)
. .++++.||+++|+++..+..+..+.+++..
T Consensus 313 ~-~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~ 343 (438)
T PRK10133 313 F-TGTWLISRFAPHKVLAAYALIAMALCLISA 343 (438)
T ss_pred H-HHHHHHHHcCHHHHHHHHHHHHHHHHHHHH
Confidence 5 899999999999998888777665555443
No 22
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.97 E-value=2.5e-29 Score=217.69 Aligned_cols=335 Identities=37% Similarity=0.592 Sum_probs=235.2
Q ss_pred hhchhhhHHHHHHhhcccccccc--hhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhccch
Q 015396 57 ISSLFPFLYFMIKDFQIAKREED--IGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVN 134 (407)
Q Consensus 57 ~~~~~~~~~~~~~~~~~s~~~~~--~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~ 134 (407)
...+.++.....++|+.-..+.+ ...+.|.+.+.+++.+.+.++.+|.++||+|||+++++|++..++...+.+.+.|
T Consensus 41 ~~~L~~~~~~~V~~F~~a~~~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~ 120 (451)
T KOG2615|consen 41 VSSLYPFVVFMVRDFNIAIGEPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRN 120 (451)
T ss_pred ccchhHHHHHhhHHHHHhhCCcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 46666677777788877655555 7888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhccchhHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcccccccccCCC
Q 015396 135 FWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFP 214 (407)
Q Consensus 135 ~~~l~~~r~l~G~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~~~~~~~ 214 (407)
+..++++|++.|+..|...++.++++|.+++|+|+.+++.++...++|.++||.+||++.+. . ..++++.
T Consensus 121 F~afv~aR~l~Gi~kgnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f--------~--~~~g~~p 190 (451)
T KOG2615|consen 121 FAAFVLARFLGGIFKGNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQF--------S--SISGSYP 190 (451)
T ss_pred HHHHHHHHHhhhhccCchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhh--------H--hhhccCc
Confidence 97788889999999999999999999999999999999999999999999999999999871 1 1122455
Q ss_pred ChhHHHHHHHHHHH-HHHHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccccccccccccchhHHHHHHHHH
Q 015396 215 YFLPCLCISLFAFG-VTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCV 293 (407)
Q Consensus 215 ~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (407)
+..|.++..+.... .....+++||+-+.+++++++. +.++..++.++..+.........++|++....+..+..
T Consensus 191 ~alP~~~v~i~a~~~v~~~~~~lpETL~~rk~~~~~~-----~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i 265 (451)
T KOG2615|consen 191 FALPCLLVFILAAGDVTFFPWFLPETLPLRKRNDEHS-----TLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRI 265 (451)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCccccchhhccccc-----chhhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHH
Confidence 56655666665555 4556778999976554441111 11111111111111112223445667766665666666
Q ss_pred HhhccchhhhHHhhhccCCCcc--CccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhch-hHHHHHHHHHHHHHHhh
Q 015396 294 FSLHDMAYSEIFSLWANSPKKL--GGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP-IMVARIAGVLTIPLLTS 370 (407)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~--~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~ 370 (407)
.....+.+...++.|....... +++|+++.+.|.+++..++.+.+.+..+.+++.+..+. +..+..+..++...+++
T Consensus 266 ~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~ll 345 (451)
T KOG2615|consen 266 FGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLL 345 (451)
T ss_pred HHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHH
Confidence 6666667777777777666554 66999999999999999999999887666666444433 33344444444444444
Q ss_pred hhHHHhhhhh------hhHhhhhhhHHHHHHHhhcCCCCCCC
Q 015396 371 YPYIAMLSGF------GLAFLLNCASVVKNLLSSSGPGSKRS 406 (407)
Q Consensus 371 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~p~~~rs 406 (407)
+......... ..+...........+.....|++.|+
T Consensus 346 ls~~~~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG 387 (451)
T KOG2615|consen 346 LSLARTPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQRG 387 (451)
T ss_pred HhccccchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCcccch
Confidence 3332221111 11122222234456677788888876
No 23
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.96 E-value=9.9e-28 Score=223.20 Aligned_cols=279 Identities=17% Similarity=0.249 Sum_probs=216.7
Q ss_pred HHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHH
Q 015396 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (407)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (407)
+.++.+....+..........+.+|.+.+++|.+.++ .|+..+.+.+++.+++++.|+++||+|||+++..+.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~------~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 76 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPA------AGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVA 76 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHH------HhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHH
Confidence 3455667777888888889999999999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCC
Q 015396 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (407)
Q Consensus 121 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 199 (407)
+.+++.+++++++|++.+++.|++.|++.+...+. ..++.|++|+++|++++++...+..+|..++|++++++.+
T Consensus 77 ~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~---- 152 (382)
T PRK10091 77 LCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQ---- 152 (382)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhh----
Confidence 99999999999999999999999999998887775 8889999999999999999999999999999999999987
Q ss_pred CCCcccccccccCCCChhHHHHHHHHHHHHHH-HHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccccccccc
Q 015396 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSL 278 (407)
Q Consensus 200 ~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (407)
.++||..+.+.++..++..+ ..+++||.+++.+ .+ .+ ...+.
T Consensus 153 ------------~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~~~~--~~-~~----------------------~~~~~ 195 (382)
T PRK10091 153 ------------EFSWRYTFLLIAVFNIAVLASIYFWVPDIRDEAK--GG-LR----------------------EQFHF 195 (382)
T ss_pred ------------hccHHHHHHHHHHHHHHHHHHHHHhCCCCCcccc--cC-HH----------------------HHHHH
Confidence 33455555776665554433 3455676532110 00 00 01123
Q ss_pred cccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHH
Q 015396 279 LKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 358 (407)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 358 (407)
++++..+......++..........+.+.+..+. +|+++.+.+.+.+..+++..+++. +.+++.||+++++.+.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~s~~~~~~~~~~~~~~~~ig~~-~~g~l~~r~~~~~~~~ 269 (382)
T PRK10091 196 LRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFI-----SGFSETSMTFIMMLVGLGMVLGNL-LSGRLSGRYSPLRIAA 269 (382)
T ss_pred hcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHhH-HHheeccccCchhHHH
Confidence 5566666554444433333333333444444433 688999999999999999999985 8899999999999988
Q ss_pred HHHHHHHHHHhhhh
Q 015396 359 IAGVLTIPLLTSYP 372 (407)
Q Consensus 359 ~~~~~~~~~~~~~~ 372 (407)
.+..+.+++.+.+.
T Consensus 270 ~~~~~~~i~~~~~~ 283 (382)
T PRK10091 270 VTDFIIVLALLMLF 283 (382)
T ss_pred HHHHHHHHHHHHHH
Confidence 88777776665443
No 24
>PRK10504 putative transporter; Provisional
Probab=99.96 E-value=2.9e-27 Score=226.46 Aligned_cols=305 Identities=15% Similarity=0.112 Sum_probs=229.5
Q ss_pred hHHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHH
Q 015396 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (407)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (407)
.+.++.++...++..++...+.+.+|.+.+++|.++.+ .+++.+.+.++..++.++.|+++||+|||++++.+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~ 82 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLH------MHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAI 82 (471)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHH
Confidence 34566777888888888899999999999999999998 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCC
Q 015396 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (407)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 198 (407)
++.+++.+++.++++++.+++.|+++|++.+...+. .+++.|++|+++|+++.++.....++|..++|.+++.+.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~--- 159 (471)
T PRK10504 83 VLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVE--- 159 (471)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh---
Confidence 999999988889999999999999999998887775 8899999999999999999999999999999999999998
Q ss_pred CCCCcccccccccCCCChhHHHHHHHHHHHHHHH-HhccccCCCCCCCCcchhhhhhh---------hhhhchh------
Q 015396 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYD---------ALESASA------ 262 (407)
Q Consensus 199 ~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~---------~~~~~~~------ 262 (407)
..||| ..+.+......+..+. ....|+.+.... +.+....... ..+..+.
T Consensus 160 ----~~gw~---------~~f~~~~~~~~l~~~~~~~~~~~~~~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (471)
T PRK10504 160 ----YASWH---------WIFLINIPVGIIGAIATLMLMPNYTMQTR-RFDLSGFLLLAVGMATLTLALDGSKGLGLSPL 225 (471)
T ss_pred ----hccHH---------HHHHHHHHHHHHHHHHHHHhCCCccccCC-CCChHHHHHHHHHHHHHHHHHhcCCcCCcchH
Confidence 34444 4446655544443333 334444332211 1111100000 0000000
Q ss_pred ----------------hhhhhhcccccccccccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHH
Q 015396 263 ----------------EVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVG 326 (407)
Q Consensus 263 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~ 326 (407)
..+|.+.+++....++++|++++......++..........+.|+|.+.. +|.++.+.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~g 300 (471)
T PRK10504 226 AIAGLVAVGVVALLLYLLHARNNNRALFSLKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIG-----LGFSPFHAG 300 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCCHHHHH
Confidence 00111112223334578999998887777777766666666778777654 788999999
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHHHHHhhhhH
Q 015396 327 EVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPY 373 (407)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (407)
+......++..++.. +.+++.||+++|+.+..+..+..+...++.+
T Consensus 301 ~~~~~~~~~~~~~~~-~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~ 346 (471)
T PRK10504 301 LMMIPMVLGSMGMKR-IVVQVVNRFGYRRVLVATTLGLALVSLLFML 346 (471)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHcCchHHHHHHHHHHHHHHHHHHh
Confidence 998888888877764 7889999999999998888877766655544
No 25
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.96 E-value=2.4e-27 Score=219.69 Aligned_cols=290 Identities=12% Similarity=0.078 Sum_probs=214.9
Q ss_pred CchHHHHHHHHHHHHhhhhhhchhhhHHHHHH-hhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHH
Q 015396 38 LPITELFSIWIIVLCTALPISSLFPFLYFMIK-DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII 116 (407)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~ 116 (407)
..++.+...++..++.+....+..|..+.+.+ ++|+|++| .+++.+++.+++.++.++.|++.||+|.|+++.
T Consensus 31 ~a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q------~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~ 104 (462)
T PRK15034 31 IARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQ------LFLLTALPSVSGALLRVPYSFMVPIFGGRRWTV 104 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 44577777888888888899999999998876 89999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcc-----chHHHHHHHHHHHhhhccchhHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhh
Q 015396 117 MGTASVVIFNTLFGLS-----VNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGG 191 (407)
Q Consensus 117 ~~~~~~~~~~~~~~~~-----~~~~~l~~~r~l~G~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 191 (407)
++.++.++.++..+++ ++++.+++.|++.|++.+.+.+....+++++|+++||+++|+.....++|..+++++..
T Consensus 105 ~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gigg~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p 184 (462)
T PRK15034 105 FSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFAGANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAP 184 (462)
T ss_pred HHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHH
Confidence 9999999999988876 89999999999999985545456999999999999999999997667777766655554
Q ss_pred hhcCCCCCCCCccccccccc----CCCChhHHHHHHHHHHHHHHHHh-ccccCCCCCCCCcchhhhhhhhhhhchhhhhh
Q 015396 192 FLAQPAEKYPNLFSSESLFG----KFPYFLPCLCISLFAFGVTIAAF-WLPETLHRHNDDDDSCDVSYDALESASAEVKE 266 (407)
Q Consensus 192 ~l~~~~~~~~~~~gw~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (407)
.+.... .-..+||+.... ..+|+...++..+..++..+..+ ++++.++ . +.
T Consensus 185 ~~i~~~--l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~-~--~~------------------- 240 (462)
T PRK15034 185 LVIFVP--VFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIAS-S--RA------------------- 240 (462)
T ss_pred HHHHHH--HHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc-c--cc-------------------
Confidence 433100 000345544331 23366666666666555444433 3333221 1 00
Q ss_pred hhcccccccccccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHH
Q 015396 267 EEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPF 346 (407)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (407)
..+..++.+|+|+.|...+.+++......++..++|.|..+. + +............+...+.+ +++|+
T Consensus 241 ----~~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~-----~--~~~~~l~~~~l~~l~~~l~r-plgG~ 308 (462)
T PRK15034 241 ----SIADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQ-----F--PDVNILRLAFFGPFIGAIAR-SVGGA 308 (462)
T ss_pred ----CHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH-----c--ChHHHHHHHHHHHHHHHHHH-HhhHH
Confidence 011345688999999999999998888888888899887653 2 22222222333455666666 58999
Q ss_pred HHHHhchhHHHHHHHHHHHHHHh
Q 015396 347 LERILGPIMVARIAGVLTIPLLT 369 (407)
Q Consensus 347 l~~~~~~~~~~~~~~~~~~~~~~ 369 (407)
++||+|+++++.++.+...+...
T Consensus 309 LADRiG~~~vl~~~~i~~~i~~~ 331 (462)
T PRK15034 309 ISDKFGGVRVTLINFIFMAIFSA 331 (462)
T ss_pred HHHhcCchHHHHHHHHHHHHHHH
Confidence 99999999999988876666553
No 26
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.96 E-value=1.2e-27 Score=220.45 Aligned_cols=286 Identities=25% Similarity=0.415 Sum_probs=217.4
Q ss_pred HHHHHHHhhhhhhchhhhHH-HHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHH
Q 015396 46 IWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (407)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~ 124 (407)
+++..++..+......+.+| .+.+++|.++.+ .+++.+++.++..+++++.|+++||+|||+++..+.++.++
T Consensus 1 L~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~ 74 (352)
T PF07690_consen 1 LFLAFFLSGFGFSIISPALPLYLAEELGLSPSQ------IGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFAL 74 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHC------HHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHccCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhh
Confidence 35667788888889999999 899999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCc
Q 015396 125 FNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL 203 (407)
Q Consensus 125 ~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~ 203 (407)
+.++..++++.+.+++.|++.|++.+...+. .+++.|++|+++|++++++.+....+|..++|.+++++.+ .
T Consensus 75 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~-------~ 147 (352)
T PF07690_consen 75 GSLLLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLIS-------Y 147 (352)
T ss_dssp HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------H
T ss_pred HHHHhhhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhh-------c
Confidence 9666666688889999999999998888776 9999999999999999999999999999999999999997 4
Q ss_pred ccccccccCCCChhHHHHHHHHHHHHHHH-HhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhccccc-cccccccc
Q 015396 204 FSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREAT-PKKSLLKN 281 (407)
Q Consensus 204 ~gw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 281 (407)
+|||+. +++.++..++..+. ..++++++++++.++++++. +++++... .++.++++
T Consensus 148 ~~~~~~---------~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~ 205 (352)
T PF07690_consen 148 FGWRWA---------FLISAILSLIAAILFILFLPEPPPPRERESPKESE-------------SKKPKPLKPGFKSLFKN 205 (352)
T ss_dssp CHHCCH---------HHHHHHHHHHHHHHHHCCC---STTTT--SSTTTT---------------HHHCCCH-CTHHHHH
T ss_pred cccccc---------cccccchhhhhhhhHhhhhhhcccccccccccccc-------------ccccccccccccccccc
Confidence 445444 47777776665543 34555554443332221110 00011122 35667777
Q ss_pred chhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccc-hhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHH
Q 015396 282 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYS-TQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIA 360 (407)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 360 (407)
+.++......++..+.......+.|.|..+. +|++ ..+.+......++...++.. +.+++.||+++++.....
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~ 279 (352)
T PF07690_consen 206 PVLWILLIAFFLFFFVFSGFSFFLPLYLQEV-----LGFSGPSQAGLLFSIFGIVGIIGSL-LAGRLSDRFGRRRRLLIA 279 (352)
T ss_dssp HCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH-----HHCCTHHHHHHHHHHHHHHHHHHHH-HHHHHHHHTTCHHHHHHH
T ss_pred chhhhhhhhhhHHHHHHHHhhcccchhhhhc-----cCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHcCcHHHHHHH
Confidence 7776555555555556666777888875554 7888 78999999999999999875 888888999987776666
Q ss_pred HHHHHHHHhhhh
Q 015396 361 GVLTIPLLTSYP 372 (407)
Q Consensus 361 ~~~~~~~~~~~~ 372 (407)
.....+....+.
T Consensus 280 ~~~~~~~~~~~~ 291 (352)
T PF07690_consen 280 ILLLILGALGLL 291 (352)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHHH
Confidence 655555544443
No 27
>PRK09952 shikimate transporter; Provisional
Probab=99.96 E-value=3.4e-27 Score=223.14 Aligned_cols=334 Identities=16% Similarity=0.129 Sum_probs=214.7
Q ss_pred hHHHHHHHHHHHHhhhhhhchhhhHHH-HHHhh--cccccccchhhH-HHHHHHHHHHHHHHhhhhhhhcccccCChHHH
Q 015396 40 ITELFSIWIIVLCTALPISSLFPFLYF-MIKDF--QIAKREEDIGSY-AGYVGSSFMFGRALTSVFWGLVADRYGRKPVI 115 (407)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~s~~~~~~~~~-~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~ 115 (407)
++......+..++++++...+....|. +.+++ +.++.+ +.. .....++..++..+++++.|+++||+|||+++
T Consensus 21 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l 97 (438)
T PRK09952 21 RRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAM---GTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHH---HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHH
Confidence 344556777888999999988888774 45555 555542 111 11122455677889999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccchHH--------HHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHH
Q 015396 116 IMGTASVVIFNTLFGLSVNFW--------MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIG 186 (407)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 186 (407)
..+.+++++++++++++++++ .++++|+++|++.|...+. ..++.|++|+++|++..+..+.+..+|..++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~ 177 (438)
T PRK09952 98 MLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLS 177 (438)
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 999999999999999999987 5889999999999887775 8999999999999999999999999999998
Q ss_pred HHhhhhhcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhh
Q 015396 187 PALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKE 266 (407)
Q Consensus 187 ~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (407)
+.+...+.....+. .+..++||.++++.++..++........||++++.+.+++.++
T Consensus 178 ~~~~~~l~~~~~~~--------~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~~~--------------- 234 (438)
T PRK09952 178 TGLVSLISMMTTDE--------QFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQAA--------------- 234 (438)
T ss_pred HHHHHHHHHhCCHH--------HhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhccc---------------
Confidence 88777765311100 0114567777787777655544444455666543211100000
Q ss_pred hhcccccccccccccchhHHHHH-HHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHH
Q 015396 267 EEGREATPKKSLLKNWPLMSSII-VYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYP 345 (407)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~ 345 (407)
.+ +.....+.++++++.+.... ..++..........+.|.|..+. +|++...........++...++. ++.+
T Consensus 235 ~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~-----~g~s~~~~~~~~~~~g~~~~i~~-~~~g 307 (438)
T PRK09952 235 AK-KRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQN-----LGLPRELFLNIGLLVGGLSCLTI-PCFA 307 (438)
T ss_pred cc-ccCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 00 00011123456666555433 33333444445556777776554 67777655555555566666666 4789
Q ss_pred HHHHHhchhHHHHHHHHHHHHHHhhhhHHH-hhhhhhh---Hhhh-h-----hhHHHHHHHhhcCCCCCCC
Q 015396 346 FLERILGPIMVARIAGVLTIPLLTSYPYIA-MLSGFGL---AFLL-N-----CASVVKNLLSSSGPGSKRS 406 (407)
Q Consensus 346 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~-~-----~~~~~~~~~~~~~p~~~rs 406 (407)
++.||++||+.+..+.++..+....+.... ....... ...+ + ..+.......|.+|.+.|.
T Consensus 308 ~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~ 378 (438)
T PRK09952 308 WLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRY 378 (438)
T ss_pred HHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhH
Confidence 999999999988877665544433221111 1011111 1111 0 1223456778999998874
No 28
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.96 E-value=6.4e-27 Score=218.80 Aligned_cols=282 Identities=20% Similarity=0.222 Sum_probs=215.2
Q ss_pred HHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHH
Q 015396 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (407)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~ 124 (407)
......+....+.+.+.+.+|.+.+++|.++.+ .++..+.+.++..+++++.|+++||+|||+.+..+.++..+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i 80 (392)
T PRK10473 7 CSFALVLLYPAGIDMYLVGLPRIAADLNASEAQ------LHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFII 80 (392)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHH
Confidence 344556666677778889999999999999998 99999999999999999999999999999999999999999
Q ss_pred HHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCc
Q 015396 125 FNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL 203 (407)
Q Consensus 125 ~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~ 203 (407)
+.+++..+++++.+++.|+++|++.+...+. .+++.|++|+++|++++++.+....+|..++|.+++.+.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~-------- 152 (392)
T PRK10473 81 ASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIML-------- 152 (392)
T ss_pred HHHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------
Confidence 9999999999999999999999998886664 9999999999999999999999999999999999999877
Q ss_pred ccccccccCCCChhHHHHHHHHHHHHH-HHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccccccccccccc
Q 015396 204 FSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNW 282 (407)
Q Consensus 204 ~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (407)
..+|+..+.+.++..++.. +..+.+||+++..++++. + ..+..++.++++
T Consensus 153 --------~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~-------------------~~~~~~~~~~~~ 203 (392)
T PRK10473 153 --------KFPWQSLFYTMAAMGILVLLLSLFILKETRPARAPAAS--S-------------------KPRENSESLLNR 203 (392)
T ss_pred --------CcChHHHHHHHHHHHHHHHHHHHHHcCCCCCcccCCcc--c-------------------hHHHHHHHHhCH
Confidence 3345555566666555433 334556765432211100 0 001223456677
Q ss_pred hhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHH
Q 015396 283 PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGV 362 (407)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 362 (407)
+++...+...+.......+..+.|.+..+. +|++..+.+.+....+++.+++.. ..+++.||+++|+.+..+..
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~i~~~~-~~~~l~~r~g~~~~~~~~~~ 277 (392)
T PRK10473 204 FFLSRLVITTLSVTVILTFVNTSPVLLMEQ-----MGFSRGEYAIIMALTAGVSMTVSF-STPFALGIFKPRTLMLTSQV 277 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCHHHHHHHHHH
Confidence 766554444443333334444445554433 788999999999999999999985 78999999999999988888
Q ss_pred HHHHHHhhhhHHH
Q 015396 363 LTIPLLTSYPYIA 375 (407)
Q Consensus 363 ~~~~~~~~~~~~~ 375 (407)
+..++...+....
T Consensus 278 ~~~~~~~~~~~~~ 290 (392)
T PRK10473 278 LFLAAGITLALSP 290 (392)
T ss_pred HHHHHHHHHHHHH
Confidence 7777666555443
No 29
>PRK15075 citrate-proton symporter; Provisional
Probab=99.96 E-value=6e-27 Score=221.54 Aligned_cols=286 Identities=16% Similarity=0.116 Sum_probs=195.8
Q ss_pred chHHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHH-HHH-----HHHHHHHhhhhhhhcccccCCh
Q 015396 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYV-GSS-----FMFGRALTSVFWGLVADRYGRK 112 (407)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~-~~~-----~~~~~~~~~~~~G~l~dr~Grr 112 (407)
+++....+++..++++++...+.+..|.+.++++.++.+ .+.. .+. ..++..+++++.|+++||+|||
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr 86 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNE------FASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRR 86 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCc------hHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchH
Confidence 345566788899999999999999999999999998877 4433 222 2333357889999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccchHH--------HHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHH
Q 015396 113 PVIIMGTASVVIFNTLFGLSVNFW--------MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGL 183 (407)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 183 (407)
+.++.+.++..++.++++++++++ .+++.|+++|++.+...+. ..+++|++|+++|++++++...+.++|.
T Consensus 87 ~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~ 166 (434)
T PRK15075 87 KGLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAV 166 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHH
Confidence 999999999999999999999877 4689999999998887774 8999999999999999999999888888
Q ss_pred HHHHHhhhhhcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhccccCCCCCCCCcchhhhhhhhhhhchhh
Q 015396 184 IIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAE 263 (407)
Q Consensus 184 ~~~~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (407)
.+++.+++.+.....+. .. ..++||.++++..+...+........||+++. .+..
T Consensus 167 ~~g~~~g~~l~~~~~~~-------~~-~~~gWr~~f~~~~~~~~~~~~~~~~~~e~~~~-------~~~~---------- 221 (434)
T PRK15075 167 VFAALLGYLLNQWLSPA-------QM-AEWGWRIPFLIGCLIVPFIFLIRRSLEETEEF-------LARK---------- 221 (434)
T ss_pred HHHHHHHHHHHHhCCHH-------HH-hccchHHHHHHHHHHHHHHHHHHHhcCCCHHH-------HHhh----------
Confidence 88888888764311000 00 03455655565443322222111122221100 0000
Q ss_pred hhhhhcccccccccccccchhHHH-HHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHh
Q 015396 264 VKEEEGREATPKKSLLKNWPLMSS-IIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLS 342 (407)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~ 342 (407)
.+.+.....+...++++.+.. ....++..........+.|.|+++. +|++..+.++......++.+++..
T Consensus 222 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-----~g~~~~~~~~~~~~~~~~~~~~~~- 292 (434)
T PRK15075 222 ---HRPSMREIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTV-----LHLSAADSLLVTLCVGVSNFIWLP- 292 (434)
T ss_pred ---hccccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHH-
Confidence 000001112223344443332 2223333334445566778777664 688888888888888888888875
Q ss_pred HHHHHHHHhchhHHHHHHHHHH
Q 015396 343 LYPFLERILGPIMVARIAGVLT 364 (407)
Q Consensus 343 ~~~~l~~~~~~~~~~~~~~~~~ 364 (407)
+.+++.||++||+....+..+.
T Consensus 293 ~~g~l~Dr~g~r~~~~~~~~~~ 314 (434)
T PRK15075 293 IGGALSDRIGRRPVLIAFTVLA 314 (434)
T ss_pred HHHHHHHHhcchHHHHHHHHHH
Confidence 8899999999999877765443
No 30
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.96 E-value=2.9e-28 Score=226.70 Aligned_cols=275 Identities=16% Similarity=0.158 Sum_probs=210.2
Q ss_pred HHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHH
Q 015396 49 IVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTL 128 (407)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~ 128 (407)
..+..+.....+.+..|.+.+++|.+..+ .+++.+++.++..+++++.|+++||+|||+++..+.++..++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 76 (379)
T TIGR00881 3 GYAAYYLVRKNFALAMPYLVEEIGLSKTD------LGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLF 76 (379)
T ss_pred hhhHHHHhHHhhhhhhHHHHHHhCCCHhH------HHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHH
Confidence 45567778888899999999999999999 999999999999999999999999999999999999999999999
Q ss_pred hhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHH-HhhhhhcCCCCCCCCcccc
Q 015396 129 FGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGP-ALGGFLAQPAEKYPNLFSS 206 (407)
Q Consensus 129 ~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~-~~~~~l~~~~~~~~~~~gw 206 (407)
++++++++.+++.|++.|++.+...+. .+++.|++|+++|++++++.+.+..+|..++| .+++.+.+
T Consensus 77 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~----------- 145 (379)
T TIGR00881 77 FGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAE----------- 145 (379)
T ss_pred HHHhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHh-----------
Confidence 999999999999999999998887775 89999999999999999999999999999999 56666665
Q ss_pred cccccCCCChhHHHHHHHHHHH-HHHHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccccccccccccchhH
Q 015396 207 ESLFGKFPYFLPCLCISLFAFG-VTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLM 285 (407)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (407)
..+|+..+.+.++..++ .++..++.||+++..+.++++++.. ++.++.+++.+++.+..+...+.+++++.++
T Consensus 146 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (379)
T TIGR00881 146 -----LYSWHWVFIVPGIIAIIVSLICFLLLRDSPQSCGLPPAEEMPN-EEPDGDAEKKEEELTKKQIFLQYVLLNKVLW 219 (379)
T ss_pred -----cCCchhHHHHHHHHHHHHHHHHheeeCCCccccccCccccCcc-cccccccccccccccchHHHHHHHHhcchHH
Confidence 33445445666655544 3444556666654332211111100 0000000111111111222345678889888
Q ss_pred HHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhc
Q 015396 286 SSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG 352 (407)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 352 (407)
...+..++..........+.|.|..+. +|++..+.+.......++..++.. +.+++.||..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~-~~g~l~~r~~ 280 (379)
T TIGR00881 220 YISLGYVFVYVVRTGILDWSPLYLTQE-----KGFSKEKASWAFTLYELGGLVGTL-LAGWLSDKLF 280 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCCCHHHHHHHHHHHHHHcchhHH-HHHHHHHHHc
Confidence 888888777777777778888887664 788999999999999999999985 8889999753
No 31
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.96 E-value=4.6e-27 Score=219.31 Aligned_cols=263 Identities=13% Similarity=0.065 Sum_probs=206.0
Q ss_pred hhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhccchHH
Q 015396 57 ISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFW 136 (407)
Q Consensus 57 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~ 136 (407)
.....+.+|.+.+++|+|.++ .|++.+.+.+++.+++++.|+++||+|||+++..+..+++++.+.+++++|++
T Consensus 25 ~~~~~~~lp~i~~~~~~s~~~------~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~ 98 (393)
T PRK09705 25 LTSVGPLLPQLRQASGMSFSV------AALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSA 98 (393)
T ss_pred hhccchhHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchH
Confidence 367789999999999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcccccccccCCCC
Q 015396 137 MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPY 215 (407)
Q Consensus 137 ~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~~~~~~~~ 215 (407)
.+++.|+++|++.+...+. ..++.|++| ++|+++++.+..+..+|..+++.+++++.+. ..+||..+
T Consensus 99 ~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~------~~~w~~~~----- 166 (393)
T PRK09705 99 LLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQH------SETWYQTL----- 166 (393)
T ss_pred HHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHh------cCCHHHHH-----
Confidence 9999999999998887775 888999987 7899999999999999999999999998871 12454433
Q ss_pred hhHHHHHHHHHHHHHHHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccccccccccccchhHHHHHHHHHHh
Q 015396 216 FLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFS 295 (407)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (407)
...++..++.++..+...+..++ ++++ ++...++.+++++.+...+.+++..
T Consensus 167 ----~~~~~~~~~~~~~~~~~~~~~~~--~~~~----------------------~~~~~~~~l~~~~~~~l~~~~~~~~ 218 (393)
T PRK09705 167 ----AWWALPAVVALFAWWWQSAREVA--SSHK----------------------TTTTPVRVVFTPRAWTLGVYFGLIN 218 (393)
T ss_pred ----HHHHHHHHHHHHHHHHHhcCCCc--cccC----------------------CCcCCcccccCHhHHHHHHHHHHHH
Confidence 44444333333322222211111 0000 0012234556777777766666666
Q ss_pred hccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHHHHHhhhh
Q 015396 296 LHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYP 372 (407)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (407)
........+.|.|+.+ +|++..+++...+..+++.++++. +.+++.||.++++....+..+..++...+.
T Consensus 219 ~~~~~~~~~lp~~l~~------~g~s~~~ag~~~~~~~i~~i~g~~-~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~ 288 (393)
T PRK09705 219 GGYASLIAWLPAFYIE------IGASAQYSGSLLALMTLGQAAGAL-LMPAMARHQDRRKLLMLALVLQLVGFCGFI 288 (393)
T ss_pred HHHHHHHHHHHHHHHH------cCCChhhhhHHHHHHHHHHHHHHH-HHHHHHhhccchHHHHHHHHHHHHHHHHHH
Confidence 6666777788888754 688999999999999999999985 889999999999988888777666665443
No 32
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.96 E-value=3e-27 Score=225.52 Aligned_cols=282 Identities=12% Similarity=0.109 Sum_probs=205.3
Q ss_pred hHHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHH
Q 015396 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (407)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (407)
++.+...+...+..........+..|.+.+++|++..+ .+++.+.+.+++.+++++.|+++||+|||+++..+.
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~------~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~ 108 (476)
T PLN00028 35 MRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSD------IGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLL 108 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHH
Confidence 44555566667777777778889999999999999998 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccchHHHHHHHHHHHhhhccchhHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCC
Q 015396 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (407)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 199 (407)
++++++.++++++++++.+++.|++.|++.+...+...+++|++|+++|++++++.+...++|..+++.+.+.+......
T Consensus 109 ~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~ 188 (476)
T PLN00028 109 MLTAPAVFCMSLVSSATGFIAVRFFIGFSLATFVSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKD 188 (476)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhHHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999998776555667889999999999999999887777887777666554321000
Q ss_pred --CCCcccccccccCCCChhHHHHHHHHHHHHHHHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhccccccccc
Q 015396 200 --YPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKS 277 (407)
Q Consensus 200 --~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (407)
.... .+||..+++.+++.++..+..++++++++....+ +.++ .. +.++.+....+++
T Consensus 189 ~~~~~~---------~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~~~--~~~~-------~~---~~~~~~~~~~~~~ 247 (476)
T PLN00028 189 AGAPSF---------TAWRIAFFVPGLLHIIMGILVLTLGQDLPDGNYR--ELKK-------SG---TMPKDSFSKVLRY 247 (476)
T ss_pred cCCcch---------hhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCchh--hHHh-------cC---ccccccHHHHHHH
Confidence 0001 2455555777776665554444444332211100 0000 00 0000001123455
Q ss_pred ccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchh
Q 015396 278 LLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI 354 (407)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 354 (407)
.++++++|...+.+++.......+..+.|.|+.+. +|++..+++.+.+..+++..+++. ++++++||+++|
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-----~g~s~~~a~~~~~~~~~~~~ig~~-~~G~lsDr~~~r 318 (476)
T PLN00028 248 GVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDR-----FGLSLETAGAIAASFGLMNLFARP-AGGYLSDVAARR 318 (476)
T ss_pred HHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHh
Confidence 67788888777766665555556666777776554 789999999999999999999985 899999999865
No 33
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.96 E-value=2.7e-27 Score=227.29 Aligned_cols=345 Identities=15% Similarity=0.064 Sum_probs=221.8
Q ss_pred hHHHHHHHHHHHHhhhhhhchhhhHHHHHHhh--------cccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCC
Q 015396 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDF--------QIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGR 111 (407)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Gr 111 (407)
.+..+...+..+..+++...+.+..|.+.+++ +.++.+ .+++.+++.++..++++++|+++||+||
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~s~~~ig~~~~~~~~G~l~dr~Gr 84 (479)
T PRK10077 11 FSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSL------LGFCVASALIGCIIGGALGGYCSNRFGR 84 (479)
T ss_pred HHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhH------HHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 44455666778888889999999999998887 667777 9999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhcc------------chHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHH
Q 015396 112 KPVIIMGTASVVIFNTLFGLS------------VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTA 178 (407)
Q Consensus 112 r~~~~~~~~~~~~~~~~~~~~------------~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~ 178 (407)
|++++++.++..++.+.++++ ++++.+++.|+++|++.|...+. .++++|++|+++|++++++.+.+
T Consensus 85 r~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~ 164 (479)
T PRK10077 85 RDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFA 164 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHH
Confidence 999999999998888777653 23567889999999999887775 99999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhccccCCCCCCCCcchhhhh--hhh
Q 015396 179 WGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVS--YDA 256 (407)
Q Consensus 179 ~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~--~~~ 256 (407)
..+|..+++.+++.+....... . ...++||+++++.++..++..+..+++||+|++...+++.++.. .++
T Consensus 165 ~~~G~~~~~~~~~~~~~~~~~~-------~-~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~ 236 (479)
T PRK10077 165 IIFGQLVVYFVNYFIARSGDAS-------W-LNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRK 236 (479)
T ss_pred HHHHHHHHHHHHHHHhccCccc-------c-cccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHH
Confidence 9999999998887765421100 0 01345666668777777766666778899876532221111110 000
Q ss_pred hhhchh------hhhhhhcccccccccccccchhHHHHHHHHHHhhc----cchhhhHHhhhccCCCccCccccchhhHH
Q 015396 257 LESASA------EVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLH----DMAYSEIFSLWANSPKKLGGLNYSTQMVG 326 (407)
Q Consensus 257 ~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~g~s~~~~~ 326 (407)
.....+ +..+..+.+....+..+.- .............+. ......+.|.+... .|++....+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~------~g~~~~~~~ 309 (479)
T PRK10077 237 IMGNTLATQALQEIKHSLDHGRKTGGKLLMF-GVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKT------LGASTDIAL 309 (479)
T ss_pred HcCChhHHHHHHHHHHHHHHhhhhhhhhcch-hHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHH------cCCCCchHH
Confidence 000000 0000000000000111110 000111110111111 11111223433332 677776667
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHHHHHhhhhHHHhh--hhhhh--Hhhhh-------hhHHHHHH
Q 015396 327 EVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAML--SGFGL--AFLLN-------CASVVKNL 395 (407)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~-------~~~~~~~~ 395 (407)
......++...++.. +.+++.||++||+.+..+..+..++.+.+...... ..... ...+. ........
T Consensus 310 ~~~~~~~~~~~i~~~-~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (479)
T PRK10077 310 LQTIIVGVINLTFTV-LAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVL 388 (479)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhccccchhHHH
Confidence 777777888888874 88999999999999999888888777665433211 11111 11111 11234567
Q ss_pred HhhcCCCCCCC
Q 015396 396 LSSSGPGSKRS 406 (407)
Q Consensus 396 ~~~~~p~~~rs 406 (407)
.+|.+|++.|+
T Consensus 389 ~~e~~p~~~r~ 399 (479)
T PRK10077 389 LSEIFPNAIRG 399 (479)
T ss_pred hHhhCChhHHH
Confidence 88999988775
No 34
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.96 E-value=4.8e-27 Score=220.33 Aligned_cols=264 Identities=14% Similarity=0.180 Sum_probs=209.1
Q ss_pred HHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHH
Q 015396 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (407)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~ 124 (407)
.+.+..+...+...++.|.+|.+.+++|.+..+ .++..+++.+++.+++++.|+++||+|||++++.+.+++++
T Consensus 20 ~~~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~------~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 93 (413)
T PRK15403 20 ALILYDFAAYLTTDLIQPGIINVVRDFNADVSL------APASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTL 93 (413)
T ss_pred HHHHHHHHHHHHHHhhccCHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHH
Confidence 345566667778899999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCc
Q 015396 125 FNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL 203 (407)
Q Consensus 125 ~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~ 203 (407)
+.+++.++++++.++++|+++|++.+...+. ..++.|++|+++|++++++......+|..+||.+++.+.+ .
T Consensus 94 ~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~-------~ 166 (413)
T PRK15403 94 ACAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMH-------F 166 (413)
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------h
Confidence 9999999999999999999999988765554 7889999999999999999999999999999999999987 3
Q ss_pred ccccccccCCCChhHHHHHHHHHHHHHHH-HhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccccccccccccc
Q 015396 204 FSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNW 282 (407)
Q Consensus 204 ~gw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (407)
. +|+..+++.++..++..+. .+++||+++.++++.+ .+ ...+.++++++||
T Consensus 167 ~---------gw~~~f~~~~~~~~i~~~~~~~~lp~~~~~~~~~~~-~~------------------~~~~~~~~ll~~~ 218 (413)
T PRK15403 167 V---------HWKVLFAIIAVMGLIAFVGLLLAMPETVKRGAVPFS-AK------------------SVLRDFRNVFRNR 218 (413)
T ss_pred c---------CHHHHHHHHHHHHHHHHHHHHHhCCCCccccCCCCC-hH------------------HHHHHHHHHHcCH
Confidence 3 4555557777766665443 4567876542111100 00 0112456788999
Q ss_pred hhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchh
Q 015396 283 PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI 354 (407)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 354 (407)
.++...+...+.......+....|.++.+. +|+++.+.++.......+..++......++.|+.++|
T Consensus 219 ~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~-----~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~ 285 (413)
T PRK15403 219 LFLTGAATLSLSYIPMMSWVAVSPVILIDA-----GGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPR 285 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhChHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchh
Confidence 999888877777766667777778777665 6899999999888777787777654444454544444
No 35
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.96 E-value=1e-27 Score=221.02 Aligned_cols=324 Identities=22% Similarity=0.237 Sum_probs=231.2
Q ss_pred HHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhc---cchHHHHHHHHHH
Q 015396 68 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL---SVNFWMAVLTRFL 144 (407)
Q Consensus 68 ~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~r~l 144 (407)
.+++|.+.++.+.....+.+.+++.+|.++|++..|+++||+|||..++++.++..++.+++.+ .++++.++++|++
T Consensus 46 ~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i 125 (485)
T KOG0569|consen 46 IERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLI 125 (485)
T ss_pred HHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 3556766666667777999999999999999999999999999999999998888888776665 5789999999999
Q ss_pred HhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcccccccccCCCChhHHHHHH
Q 015396 145 LGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCIS 223 (407)
Q Consensus 145 ~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~ 223 (407)
.|+..|..... ..++.|..|.+.||....+.+.+..+|..++..++.--. +|- ...|...+....
T Consensus 126 ~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~i---------lGt-----~~~W~~l~~~~~ 191 (485)
T KOG0569|consen 126 VGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSL---------LGT-----EDLWPYLLAFPL 191 (485)
T ss_pred HHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHh---------cCC-----CcchHHHHHHHH
Confidence 99999997775 999999999999999999999999999999966653322 111 334666668888
Q ss_pred HHHHHHHHHHhccccCCCCCCC-Ccchhhhhh--hhhhhc----------hhhhhhh--hcccccccccccccchhHHHH
Q 015396 224 LFAFGVTIAAFWLPETLHRHND-DDDSCDVSY--DALESA----------SAEVKEE--EGREATPKKSLLKNWPLMSSI 288 (407)
Q Consensus 224 ~~~~~~~~~~~~~~e~~~~~~~-~~~~~~~~~--~~~~~~----------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 288 (407)
+++++.++.+.++||+|++.-. +++++++.+ +.+... .++.+++ .+++..+.+++++++..+...
T Consensus 192 i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~ 271 (485)
T KOG0569|consen 192 IPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPL 271 (485)
T ss_pred HHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHH
Confidence 8888888889999999998654 333333321 111110 1111111 112455788999998887653
Q ss_pred HHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHHHHH
Q 015396 289 IVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLL 368 (407)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 368 (407)
...+.....+ .+....+.+.++.....+.|++..++.+.....++..++.++ ++.++.||.|||++++.+..++.+..
T Consensus 272 ~i~~~v~~~q-q~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~-~~~~lid~~gRRpLll~~~~~~~~~~ 349 (485)
T KOG0569|consen 272 LIGIVVSFAQ-QFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTL-VSPFLIDRLGRRPLLLISLSLMAVAL 349 (485)
T ss_pred HHHHHHHHHH-HhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCcHHHHHHHHHHHHHH
Confidence 3333322221 111122222222333344789999999999999999999985 99999999999999999998888777
Q ss_pred hhhhHHHhhhh----------------hhhHhhhhhhHHHHHHHhhcCCCCCCCC
Q 015396 369 TSYPYIAMLSG----------------FGLAFLLNCASVVKNLLSSSGPGSKRSC 407 (407)
Q Consensus 369 ~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~p~~~rs~ 407 (407)
+++........ ......++++++.+.+.+|++||+.|++
T Consensus 350 ~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~a 404 (485)
T KOG0569|consen 350 LLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSA 404 (485)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHH
Confidence 66543322111 1112223344566778999999999974
No 36
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.96 E-value=1.3e-27 Score=230.14 Aligned_cols=355 Identities=14% Similarity=0.107 Sum_probs=220.7
Q ss_pred chHHHHHHHHHHHHhhhhhhchhhhHHHHHHhh-----cccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChH
Q 015396 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDF-----QIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKP 113 (407)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~ 113 (407)
+++.+..+.++.+.++++...++...|.+.+++ +.+..+ .+++.+.+.++..++++++|+++||+|||+
T Consensus 14 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~ 87 (502)
T TIGR00887 14 HFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSV------SAAVNGSASIGTLAGQLFFGWLADKLGRKR 87 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHH------HHHHHHHHHHHHHHHHHHHHHHHHhhccHH
Confidence 344455677788889999999998888877653 122333 789999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccch------HHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHH
Q 015396 114 VIIMGTASVVIFNTLFGLSVN------FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIG 186 (407)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 186 (407)
++.++.++..++.++++++++ ++.+++.|++.|++.|...+. ..+++|++|+++|++++++.+....+|..++
T Consensus 88 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g 167 (502)
T TIGR00887 88 VYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAG 167 (502)
T ss_pred HHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988888765 789999999999999887774 9999999999999999999999999999999
Q ss_pred HHhhhhhcCCCCC-CCCc-----cccccc-ccCCCChhHHHHHHHHHHHHHHHHhccccCCCCCCCCcchhh-hh--hhh
Q 015396 187 PALGGFLAQPAEK-YPNL-----FSSESL-FGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCD-VS--YDA 256 (407)
Q Consensus 187 ~~~~~~l~~~~~~-~~~~-----~gw~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~-~~--~~~ 256 (407)
+.++..+.....+ .... ..++.. ...++||.++.+.++..++.++..+++||+|++...++++++ .. ..+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~ 247 (502)
T TIGR00887 168 AIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSA 247 (502)
T ss_pred HHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHH
Confidence 9998876531100 0000 001100 013578888888888887777777889999997433222111 11 011
Q ss_pred hhh-----chhhhhh---hhcccccccccccccc---hhHHHHH----HHHHHhhccchhhhHHhhhccCCCccCccccc
Q 015396 257 LES-----ASAEVKE---EEGREATPKKSLLKNW---PLMSSII----VYCVFSLHDMAYSEIFSLWANSPKKLGGLNYS 321 (407)
Q Consensus 257 ~~~-----~~~~~~~---~~~~~~~~~~~~~~~~---~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s 321 (407)
..+ ..++.++ +++....+++++++++ +.++..+ ..+.......+...+.|.++.+ .|++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~------~G~~ 321 (502)
T TIGR00887 248 VLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSA------IGYS 321 (502)
T ss_pred HhccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHH------HcCC
Confidence 100 0000000 0011112455665432 2212111 1111111222222233444332 4554
Q ss_pred hhhHH-----------H-HHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHHHHHhhhhHHHhh----hhhhhHhh
Q 015396 322 TQMVG-----------E-VLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAML----SGFGLAFL 385 (407)
Q Consensus 322 ~~~~~-----------~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 385 (407)
..+.+ . ......++.+++. ++.+++.||+|||+.+..+..+..+++..+...... ........
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~-~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 400 (502)
T TIGR00887 322 PPAATNNAYEELYKTAVGNLIIALAGTVPGY-WVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVL 400 (502)
T ss_pred CCccchhHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHH
Confidence 33211 1 1223334445555 478999999999999888877766665544432210 00111101
Q ss_pred ------hhhhHHHHHHHhhcCCCCCCC
Q 015396 386 ------LNCASVVKNLLSSSGPGSKRS 406 (407)
Q Consensus 386 ------~~~~~~~~~~~~~~~p~~~rs 406 (407)
.+.........+|.+|++.|+
T Consensus 401 ~~~~~~~~~~~~~~~~~~E~~p~~~R~ 427 (502)
T TIGR00887 401 AQFFANFGPNATTFIVPGEVFPTRYRS 427 (502)
T ss_pred HHHHHhcCCCchhhhhhhccCchhHHH
Confidence 111123445578999999886
No 37
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.96 E-value=7.1e-27 Score=219.47 Aligned_cols=283 Identities=17% Similarity=0.139 Sum_probs=220.1
Q ss_pred HHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHH
Q 015396 44 FSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVV 123 (407)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~ 123 (407)
..+.+..+...+....+.|.+|.+.+++|.++.+ .++..+.+.+++.+++++.|+++||+|||++++.+.++..
T Consensus 16 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~ 89 (406)
T PRK15402 16 LCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEW------VPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFI 89 (406)
T ss_pred HHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 3455666677778889999999999999999998 9999999999999999999999999999999999999999
Q ss_pred HHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCC
Q 015396 124 IFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPN 202 (407)
Q Consensus 124 ~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~ 202 (407)
++.+.+..+++++.+++.|+++|++.+...+. .+++.|.+|+++|.+.+++......+|..++|.+++.+.+
T Consensus 90 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~------- 162 (406)
T PRK15402 90 LTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIH------- 162 (406)
T ss_pred HHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------
Confidence 99999999999999999999999998887665 8899999999999999999988888999999999999987
Q ss_pred cccccccccCCCChhHHHHHHHHHHHHHHH-HhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhccccccccccccc
Q 015396 203 LFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKN 281 (407)
Q Consensus 203 ~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (407)
..+| +..+++.++..++..+. .+..||++++.+++.+. + +.....+.++++
T Consensus 163 ~~~w---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------------------~~~~~~~~~~~~ 214 (406)
T PRK15402 163 VLPW---------RGMFVLFAALAALSFFGLWRAMPETAGRVGEKLSL-K------------------ELGRDYKLVLKN 214 (406)
T ss_pred ccCc---------cHHHHHHHHHHHHHHHHHHHhCCCCCccccccccH-H------------------HHHHHHHHHHcC
Confidence 3444 44446666665554433 34566654322111000 0 011234567888
Q ss_pred chhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHH
Q 015396 282 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAG 361 (407)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 361 (407)
|+++...+..++.......+....|.++.+. +|+++.+.+.......++..++.. +.+++.||+++++.+.++.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-----~g~~~~~~g~~~~~~~~~~~~g~~-~~g~l~~r~~~~~~~~~~~ 288 (406)
T PRK15402 215 RRFVAGALALGLVSLPLLAWIALSPVILISG-----EQLSSYEYGLLQVPVFGALIAGNL-TLARLTSRRPLRSLIRMGL 288 (406)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH-----hCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCHHHHHHHHH
Confidence 8888777766666555455555567665543 688888888888777777777774 8889999999999988887
Q ss_pred HHHHHHHhhhhH
Q 015396 362 VLTIPLLTSYPY 373 (407)
Q Consensus 362 ~~~~~~~~~~~~ 373 (407)
.+..++...+..
T Consensus 289 ~~~~~g~~~~~~ 300 (406)
T PRK15402 289 WPMVAGLLLAAL 300 (406)
T ss_pred HHHHHHHHHHHH
Confidence 777666665544
No 38
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.96 E-value=1.3e-27 Score=229.32 Aligned_cols=298 Identities=19% Similarity=0.156 Sum_probs=205.8
Q ss_pred HHHHHHHhhhhhhchhhhHHHHHHhhccc--------ccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHH
Q 015396 46 IWIIVLCTALPISSLFPFLYFMIKDFQIA--------KREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (407)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s--------~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~ 117 (407)
+.+..+...++...+.+..+.+..+++.+ ..+ .+++.+++.++..+++++.|+++||+|||+++..
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~ 106 (481)
T TIGR00879 33 AAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSL------WGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLI 106 (481)
T ss_pred HHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhH------HHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHH
Confidence 33444566667788888889888888877 555 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcc---chHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhh---
Q 015396 118 GTASVVIFNTLFGLS---VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG--- 190 (407)
Q Consensus 118 ~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~--- 190 (407)
+.++..++.+++.+. .+++.+++.|+++|++.+...+. .+++.|++|+++|++++++.+.+..+|..+++.++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~ 186 (481)
T TIGR00879 107 IALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGK 186 (481)
T ss_pred HHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHh
Confidence 999999998888543 45668999999999998887775 99999999999999999999999999999999998
Q ss_pred hhhcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhccccCCCCCCCCcchhhhh--hhhhhh-ch---h--
Q 015396 191 GFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVS--YDALES-AS---A-- 262 (407)
Q Consensus 191 ~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~--~~~~~~-~~---~-- 262 (407)
....+ ..+||.++.+.++..++.++..+++||++++...+++.++.. ..+... .. +
T Consensus 187 ~~~~~----------------~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (481)
T TIGR00879 187 VSLNN----------------TLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELL 250 (481)
T ss_pred hcCCC----------------CccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHH
Confidence 55444 344555557766666666666677888765321111111100 000000 00 0
Q ss_pred --------hhhhhhcccccccccccc------cchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHH
Q 015396 263 --------EVKEEEGREATPKKSLLK------NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEV 328 (407)
Q Consensus 263 --------~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~ 328 (407)
..+.+++..+..+.+.++ .+.++...+..+...........+.+.+... .|++..+.+..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~ 324 (481)
T TIGR00879 251 DELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFEN------AGVSTDHAFLV 324 (481)
T ss_pred HHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHH------cCCCchHHHHH
Confidence 000000000111222222 2222223333333333333444455555443 68888888888
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHHHHHhhhh
Q 015396 329 LAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYP 372 (407)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (407)
.....++.+++.. +.+++.||+++|+.+..+..+.+++++.+.
T Consensus 325 ~~~~~~~~~~~~~-~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 367 (481)
T TIGR00879 325 SIIVGAVNFAFTF-VAIFLVDRFGRRPLLLIGAAGMAICLFVLG 367 (481)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 8888888888885 889999999999998888777777666554
No 39
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.96 E-value=2.2e-27 Score=220.00 Aligned_cols=300 Identities=13% Similarity=0.097 Sum_probs=216.5
Q ss_pred HHHHHHHHHHhhhhhhchhhhHHH-HHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHH
Q 015396 43 LFSIWIIVLCTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (407)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~ 121 (407)
++..+...+..........+..|. +.+++|.++.+ .+++.+++.+++.+++++.|+++||+|||+.+.++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 76 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQ------LGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLL 76 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHH------hhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHH
Confidence 345667777778888889999995 88999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccc-hHHHHHHHHHHHhhhccchhHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCC--
Q 015396 122 VVIFNTLFGLSV-NFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE-- 198 (407)
Q Consensus 122 ~~~~~~~~~~~~-~~~~l~~~r~l~G~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-- 198 (407)
..++.+++++++ +++.+++.|+++|++.+...+..++++|++|+++|++++++.....++|..+++.+++.+.....
T Consensus 77 ~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~ 156 (366)
T TIGR00886 77 LAIPCLWAGLAVQSYSVLLLLRLFIGIAGGSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFG 156 (366)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhchhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999 99999999999999876665568899999999999999999998888888888777766654110
Q ss_pred -CCCCcccccccccCCCChhHHHHHHHH-HHHHHHHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccccccc
Q 015396 199 -KYPNLFSSESLFGKFPYFLPCLCISLF-AFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKK 276 (407)
Q Consensus 199 -~~~~~~gw~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (407)
+.....+||+.|. ...++. .+..++...+.+|.++..+++++.+.. +.. . +.+++.....+
T Consensus 157 ~~~~~~~~w~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~---~~~~~~~~~~~ 219 (366)
T TIGR00886 157 AGLPAHLAWGWAFV--------IVPAGILLLPALLIFFVGADTPPGKPATGKLSFK--GAR----W---SVGTGALGDQL 219 (366)
T ss_pred ccccccccccchhH--------HHHHHHHHHHHHHHHHhcccCCcccccchhcccc--ccc----c---cccchhHHHHH
Confidence 0011234444330 222332 233333444556655332111100000 000 0 00000111345
Q ss_pred cccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHH
Q 015396 277 SLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMV 356 (407)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 356 (407)
+.+++++++...+..++..........+.+.|..+. +|+++.+.+.+.....+...++.. +.+++.||+++|+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~-~~g~l~~r~g~~~~ 293 (366)
T TIGR00886 220 KVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQ-----FGLSKVTAGAYASLGGLLGSLARP-LGGAISDRLGGARK 293 (366)
T ss_pred HHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCcHHHHHHHHHHHHHHHHHHhh-ccchHHHhhccchh
Confidence 677888888777777776666667777888887665 788999999999888888888874 88999999999887
Q ss_pred HHHHHHHHHHHHhhh
Q 015396 357 ARIAGVLTIPLLTSY 371 (407)
Q Consensus 357 ~~~~~~~~~~~~~~~ 371 (407)
+..+......+..++
T Consensus 294 ~~~~~~~~~~~~~~~ 308 (366)
T TIGR00886 294 LLMSFLGVAMGAFLV 308 (366)
T ss_pred HHHHHHHHHHHHHHH
Confidence 776665555544443
No 40
>PRK03699 putative transporter; Provisional
Probab=99.96 E-value=1.8e-26 Score=215.64 Aligned_cols=284 Identities=12% Similarity=0.155 Sum_probs=217.4
Q ss_pred chHHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHH
Q 015396 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (407)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~ 118 (407)
+++..+..++..++.........+.+|.+.+++|+|+++ .+++.+.+.+++.+++++.|+++||+|||+++..+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~------~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~ 78 (394)
T PRK03699 5 RIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSS------MSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFG 78 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 345555667777788888888999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCC
Q 015396 119 TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (407)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 197 (407)
.++.+++.++.+++++++.+++.|++.|++.+...+. .+++.|++|+++|+++++..+....+|..++|.+.+.+...
T Consensus 79 ~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~- 157 (394)
T PRK03699 79 FALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLAR- 157 (394)
T ss_pred HHHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 9999999999999999999999999999988876664 88999999999999999999889999999999998887641
Q ss_pred CCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhccccccccc
Q 015396 198 EKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKS 277 (407)
Q Consensus 198 ~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (407)
..+||.++.+.++..++..+..++ .+.|+..+++++ +. ++ ..+.
T Consensus 158 --------------~~gw~~~f~~~~~~~~~~~~~~~~-~~~p~~~~~~~~--~~---------------~~----~~~~ 201 (394)
T PRK03699 158 --------------SIEWYWVYACIGLVYVAIFILTLF-SEFPALGKHAPK--AD---------------KP----VAKE 201 (394)
T ss_pred --------------cccHHHHHHHHHHHHHHHHHHHHh-cCCccccccCcc--cc---------------Cc----cccc
Confidence 234555557666655544433332 222211111000 00 00 0011
Q ss_pred ccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHH
Q 015396 278 LLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVA 357 (407)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 357 (407)
..++.++...+..++.......+..+.|.|+.+. +|+++.+.+.+.+...++..++.. +.+++.||+++|+.+
T Consensus 202 -~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-----~g~s~~~~~~~~~~~~~~~~ig~~-~~g~l~dr~~~~~~l 274 (394)
T PRK03699 202 -KWGIGVLFLAIAALLYILAQLTFISWVPEYAQKK-----FGMSLEDAGNLVSNFWMAYMVGMW-IFSFIVRFFDLQRIL 274 (394)
T ss_pred -cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCChHHhhHHHHHHHHHHHHHHH-HHHHHHHHhchhhHH
Confidence 1235566666666666666667778889888654 789999999999999999999985 889999999999988
Q ss_pred HHHHHHHHHHHhhhh
Q 015396 358 RIAGVLTIPLLTSYP 372 (407)
Q Consensus 358 ~~~~~~~~~~~~~~~ 372 (407)
.....+..+.+..+.
T Consensus 275 ~~~~~~~~~~~~~~~ 289 (394)
T PRK03699 275 TVLAGLALVLMYLFV 289 (394)
T ss_pred HHHHHHHHHHHHHHH
Confidence 877766655554443
No 41
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.96 E-value=2.1e-26 Score=222.03 Aligned_cols=304 Identities=14% Similarity=0.168 Sum_probs=212.6
Q ss_pred CchHHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHH
Q 015396 38 LPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (407)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~ 117 (407)
.+++.+..+++..+++.++.....+.+|.+.+++|.++.+ .+++.+.+.+++.+++++.|+++||+|||+.++.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 90 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQ------AASLISAAFISRWFGGLLLGAMGDRYGRRLAMVI 90 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHH
Confidence 4456666788888899999999999999999999999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCC
Q 015396 118 GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (407)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 196 (407)
+.++.+++.++++++++++.+++.|++.|++.+...+. ..++.|++|+++|++++++...+.++|..++|.+++.+.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~- 169 (496)
T PRK03893 91 SIVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVP- 169 (496)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 99999999999999999999999999999988776664 8999999999999999999999999999999999999987
Q ss_pred CCCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhccccCCCCCCCCcchhh--hhhhhhhhchhhhhhh-------
Q 015396 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCD--VSYDALESASAEVKEE------- 267 (407)
Q Consensus 197 ~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~------- 267 (407)
..||| ..+.+..+..++.++....+||++++.++++++.+ ...+.....+......
T Consensus 170 ------~~~w~---------~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (496)
T PRK03893 170 ------VWGWR---------ALFFIGILPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHRIINILLTLAAA 234 (496)
T ss_pred ------cCCHH---------HHHHHHHHHHHHHHHHHHhCCCchhhhhhccccccchhHHHHHhcchhHHHHHHHHHHHH
Confidence 44444 44455444433333334455665432211111000 0000000000000000
Q ss_pred -------hccccccc-------------------ccccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccc
Q 015396 268 -------EGREATPK-------------------KSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYS 321 (407)
Q Consensus 268 -------~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s 321 (407)
.......+ ....+.+.........+...........++|.|+.+. +|++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~-----~g~~ 309 (496)
T PRK03893 235 AALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTD-----LGYD 309 (496)
T ss_pred HHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhh-----cCCC
Confidence 00000000 0000001111111111121222223445778887544 7899
Q ss_pred hhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHHHHHh
Q 015396 322 TQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLT 369 (407)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 369 (407)
..+.+.+.+...++..++.. +.+++.||+++|+.+..+..+..+..+
T Consensus 310 ~~~~g~~~~~~~~~~~~g~~-~~g~l~dr~g~~~~~~~~~~~~~~~~~ 356 (496)
T PRK03893 310 PHTVANVLFFSGFGAAVGCC-VGGFLGDWLGTRKAYVCSLLISQLLII 356 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 99999999999999999985 889999999999988877665555443
No 42
>TIGR00895 2A0115 benzoate transport.
Probab=99.95 E-value=9.2e-27 Score=218.09 Aligned_cols=294 Identities=19% Similarity=0.266 Sum_probs=206.0
Q ss_pred chHHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHH
Q 015396 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (407)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~ 118 (407)
.++.+.......+...+......+..|.+.+++|.++.+ .+++.+.+.++..+++++.|+++||+|||+.+..+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~ 88 (398)
T TIGR00895 15 QWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQ------LGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWS 88 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHH------HHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHH
Confidence 344445555666777777788888899999999999988 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCC
Q 015396 119 TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (407)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 197 (407)
.++..++.++..++++++.+++.|++.|++.+...+. .+++.|++|+++|++++++...+..+|..++|.+++++.+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-- 166 (398)
T TIGR00895 89 ILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIP-- 166 (398)
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhh--
Confidence 9999999999999999999999999999998887775 9999999999999999999999999999999999999987
Q ss_pred CCCCCcccccccccCCCChhHHHHHHHHHH-HHHHHHhccccCCCCCCCCcchh-hhhhhhhhhchh-----hhhhhhc-
Q 015396 198 EKYPNLFSSESLFGKFPYFLPCLCISLFAF-GVTIAAFWLPETLHRHNDDDDSC-DVSYDALESASA-----EVKEEEG- 269 (407)
Q Consensus 198 ~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~- 269 (407)
..||+..+ .+.++..+ ...+...++||+++...++++++ ++..++.+.... +..+++.
T Consensus 167 -----~~g~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (398)
T TIGR00895 167 -----VFGWRSLF---------YVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKAT 232 (398)
T ss_pred -----cccceeeh---------hhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccccccccc
Confidence 45555554 55543333 34444566787764322221111 110011100000 0000000
Q ss_pred -ccccc-cccccccc---hhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHH
Q 015396 270 -REATP-KKSLLKNW---PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLY 344 (407)
Q Consensus 270 -~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~ 344 (407)
+..+. .+.+++++ ..+...+..++..........+.|.+..+ +|++..+.+.......++.+++.. +.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~~~~~-~~ 305 (398)
T TIGR00895 233 QGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMVE------LGFSLSLAATGGALFNFGGVIGSI-IF 305 (398)
T ss_pred cchhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHHH-HH
Confidence 00111 11122222 22233333334344444444555644333 788899999999999999999985 88
Q ss_pred HHHHHHhchhHHHHHHH
Q 015396 345 PFLERILGPIMVARIAG 361 (407)
Q Consensus 345 ~~l~~~~~~~~~~~~~~ 361 (407)
+++.||+++++......
T Consensus 306 ~~l~~~~~~~~~~~~~~ 322 (398)
T TIGR00895 306 GWLADRLGPRVTALLLL 322 (398)
T ss_pred HHHHhhcchHHHHHHHH
Confidence 99999999885444333
No 43
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.95 E-value=1.2e-26 Score=220.65 Aligned_cols=279 Identities=12% Similarity=0.048 Sum_probs=197.9
Q ss_pred HHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHH
Q 015396 46 IWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIF 125 (407)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~ 125 (407)
.++.....++....+....|.+.++ |.+..+ .+++.+.+.++..+++++.|+++||+|||++++.+.++.+++
T Consensus 34 ~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~------~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~ 106 (452)
T PRK11273 34 IFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGD------LGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAV 106 (452)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHH------HHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHH
Confidence 3344444445555567778888888 999999 999999999999999999999999999999999999999999
Q ss_pred HHHhhcc----chHHHHHHHHHHHhhhccchhH-HHHHHhhhccccchhhhhHHHHHHHHHHHH-HHHHhhhhhcCCCCC
Q 015396 126 NTLFGLS----VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLI-IGPALGGFLAQPAEK 199 (407)
Q Consensus 126 ~~~~~~~----~~~~~l~~~r~l~G~~~g~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~~~~~l~~~~~~ 199 (407)
.++++++ .+++.+++.|++.|++.+...+ ....+.|++|+++|++++++.+.+.++|.. .+|+++..+..
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~---- 182 (452)
T PRK11273 107 MLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAW---- 182 (452)
T ss_pred HHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH----
Confidence 8888765 3788899999999998887766 477889999999999999999999999875 45554433332
Q ss_pred CCCcccccccccCCCChhHHHHHHHHHHH-HHHHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccccc-ccc
Q 015396 200 YPNLFSSESLFGKFPYFLPCLCISLFAFG-VTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATP-KKS 277 (407)
Q Consensus 200 ~~~~~gw~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 277 (407)
..+|+..+++.++..++ .++..+++||+++....+++++. . ++.++..++.++++.+.... ...
T Consensus 183 ------------~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~ 248 (452)
T PRK11273 183 ------------FNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEY-K-NDYPDDYNEKHEQELTAKQIFMQY 248 (452)
T ss_pred ------------hccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhh-h-hccccccccccCCCccHHHHHHHH
Confidence 22455555776665554 34455667877654221111100 0 00000000000000000111 123
Q ss_pred ccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHh--chhH
Q 015396 278 LLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL--GPIM 355 (407)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~ 355 (407)
+++++.+|...+..++..........++|.|+.+. .|++..+++.......++.+++.. +.+++.||+ +||.
T Consensus 249 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~-----~g~s~~~~~~~~~~~~~~~~~g~~-~~G~l~dr~~~~r~~ 322 (452)
T PRK11273 249 VLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEV-----KHFALDKSSWAYFLYEYAGIPGTL-LCGWMSDKVFRGNRG 322 (452)
T ss_pred HHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHccCCcc
Confidence 67889998888887777776677778999998765 688888889888888888888875 889999998 4443
No 44
>PRK11043 putative transporter; Provisional
Probab=99.95 E-value=4.3e-26 Score=213.88 Aligned_cols=273 Identities=18% Similarity=0.188 Sum_probs=210.3
Q ss_pred HHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHH
Q 015396 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (407)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~ 122 (407)
+....+...+..+..+++.|.+|.+.+++|.++++ .++..+++.++..++++++|+++||+|||+++..+.++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~------~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 81 (401)
T PRK11043 8 LVYLAGLSMLGFLATDMYLPAFKAIQADLQTSASA------VSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLF 81 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHH------HHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHH
Confidence 33444456666777888999999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCC
Q 015396 123 VIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYP 201 (407)
Q Consensus 123 ~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~ 201 (407)
.++.+++.++++++.+++.|+++|++.+...+. .+++.|++|++++++..+.......+|..++|.+++++.+
T Consensus 82 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~------ 155 (401)
T PRK11043 82 ALGSLGMLWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLN------ 155 (401)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------
Confidence 999999999999999999999999987776665 8899999999999999999988899999999999999988
Q ss_pred CcccccccccCCCChhHHHHHHHHHHHHHHHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhccccccccccccc
Q 015396 202 NLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKN 281 (407)
Q Consensus 202 ~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (407)
.++|+..+++.++..++..+..++++|++++.++ ++ .+..+++++++
T Consensus 156 ----------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--------------------~~~~~~~~~~~ 202 (401)
T PRK11043 156 ----------HFGWQAIFATLFAITLLLILPTLRLKPSKKARKQ---SQ--------------------DALTFKQLLKS 202 (401)
T ss_pred ----------cCChHHHHHHHHHHHHHHHHHHHHcCCCCCcccc---ch--------------------HHHHHHHHHcC
Confidence 4445555577666666655555555554321110 00 01134566777
Q ss_pred chhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHH
Q 015396 282 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAG 361 (407)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 361 (407)
++++...+...+.......+..+.|.+..+ +|++..+.+.......++..+++. ..+++.||+++++......
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~------~g~s~~~~g~~~~~~~~~~~~g~~-~~~~l~~r~~~~~~~~~~~ 275 (401)
T PRK11043 203 KTYLGNVLIFAACSAAFFAWLTGSPFILEQ------MGYSPADIGLSYVPQTIAFLVGGY-GCRAALQKWGGEQLLPWLL 275 (401)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhHHHHHH------cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHcCHHHHHHHHH
Confidence 777765555544444444555566766543 688999999888887888888875 7889999999888766555
Q ss_pred HHHHHH
Q 015396 362 VLTIPL 367 (407)
Q Consensus 362 ~~~~~~ 367 (407)
....++
T Consensus 276 ~~~~~~ 281 (401)
T PRK11043 276 VLFAVS 281 (401)
T ss_pred HHHHHH
Confidence 444443
No 45
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.95 E-value=3.5e-28 Score=216.54 Aligned_cols=279 Identities=18% Similarity=0.150 Sum_probs=214.8
Q ss_pred CCCchHHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHH
Q 015396 36 SGLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVI 115 (407)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~ 115 (407)
.+.+++.+..+++..+++.++.+.+....+...+.+|++++. .|++++.+.+.+.+++|++|+++||+.||+++
T Consensus 28 ~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~------~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~ 101 (493)
T KOG1330|consen 28 MKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSE------LGLLQTVFIVVFMIASPLFGYLADRYNRKRVI 101 (493)
T ss_pred cccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchh------ccchhHHHHHHHHHHHHHHHHHHhhcCcceEE
Confidence 445667778899999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhc
Q 015396 116 IMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (407)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 194 (407)
..|..++.++.+.++++..+|++.++|.+.|+|.+.+.+. +++++|.+|.++|++++++++.+..+|..+|.+++..+.
T Consensus 102 ~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va 181 (493)
T KOG1330|consen 102 AVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVA 181 (493)
T ss_pred eeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeec
Confidence 9999999999999999999999999999999999999886 999999999999999999999999999999999999998
Q ss_pred CCCCCCCCccc-ccccccCCCChhHHHHHHHHHHHHH-HHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccc
Q 015396 195 QPAEKYPNLFS-SESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREA 272 (407)
Q Consensus 195 ~~~~~~~~~~g-w~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (407)
. +.+ ||+.| ...+++.++.. +..++++|+++...++.+..... ........
T Consensus 182 ~-------~~~~Wr~af---------~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~~-----------~~~~ts~~ 234 (493)
T KOG1330|consen 182 S-------LTFWWRWAF---------RGSAVLGVIVGLLVFLFVREPERGARDEVDGENKM-----------VKPFTSVW 234 (493)
T ss_pred c-------CccceEEEE---------EeehHHHHHHHHHHHhhccCcccccccccccCCcC-----------CCCccchH
Confidence 7 333 55554 56666666544 44566676654322211110000 00011123
Q ss_pred cccccccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 015396 273 TPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI 350 (407)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 350 (407)
++.+.+.+++.+....+.+....+...++.-+.|.+....... .|++..+...+..+...++.+|.+ .++.++||
T Consensus 235 kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~--~~~~~~~~~ifg~vt~~~G~lGvl-~Ggiisd~ 309 (493)
T KOG1330|consen 235 KDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYEL--IGFDHNATLIFGGVTCAGGSLGVL-FGGIISDK 309 (493)
T ss_pred HHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHH--hCCccccchhhhhHHHhhchhhhe-ehHHHHHH
Confidence 3445566667777777777777777667666666665544333 345555555666666666666653 77777777
No 46
>TIGR00898 2A0119 cation transport protein.
Probab=99.95 E-value=2.7e-27 Score=228.68 Aligned_cols=310 Identities=17% Similarity=0.194 Sum_probs=214.7
Q ss_pred hhHHHHHHhhccc---ccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhccchHHHH
Q 015396 62 PFLYFMIKDFQIA---KREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMA 138 (407)
Q Consensus 62 ~~~~~~~~~~~~s---~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l 138 (407)
+..|.+.+|+|++ ..+ .+++.+++.++..+++++.|+++||+|||++++++.++..++.++.+++++++.+
T Consensus 110 ~~~~~i~~e~~l~c~~~~~------~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~ 183 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWK------VDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVF 183 (505)
T ss_pred cccccEEEEecceechHHH------HHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHH
Confidence 5667888999998 666 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcccccccccCCCChh
Q 015396 139 VLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFL 217 (407)
Q Consensus 139 ~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~ 217 (407)
++.|++.|++.+...+. .+++.|++|+++|+++.++...+..+|.+++|.+++.+.+ ||.
T Consensus 184 ~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~-------------------wr~ 244 (505)
T TIGR00898 184 LVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD-------------------WRW 244 (505)
T ss_pred HHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH-------------------HHH
Confidence 99999999998887775 9999999999999999999999999999999998866643 555
Q ss_pred HHHHHHHHHHHHHHHHhccccCCCCCCCCcchhhhhh--hhhhhc------h----h--hhhhhhcccccccccccccch
Q 015396 218 PCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSY--DALESA------S----A--EVKEEEGREATPKKSLLKNWP 283 (407)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~--~~~~~~------~----~--~~~~~~~~~~~~~~~~~~~~~ 283 (407)
.+++.++..++..+..+++||+|++...+++.+++.+ ++..+. . . +.++.+++.+...++++++|.
T Consensus 245 ~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 324 (505)
T TIGR00898 245 LQLAVSLPTFLFFLLSWFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPN 324 (505)
T ss_pred HHHHHHHHHHHHHHHHHhcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChH
Confidence 5577777777766666788999876533332222111 000000 0 0 000001111245678888888
Q ss_pred hHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHH
Q 015396 284 LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVL 363 (407)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 363 (407)
++...+...+..+.........+.+... ++.+.. ......++..+++.+ +.+++.||+|||+.+..+.++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~---~~~~~~~~~~i~~~~-~~~~l~dr~grr~~~~~~~~~ 394 (505)
T TIGR00898 325 LRKTTLCLMMLWFTTAFSYYGLVLDLGN------LGGNIY---LDLFISGLVELPAKL-ITLLLIDRLGRRYTMAASLLL 394 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccc------cCCChH---HHHHHHHHHHHHHHH-HHHHHHHHhCCHHHHHHHHHH
Confidence 8776665544433322222222222221 444433 233344566666664 788999999999999998888
Q ss_pred HHHHHhhhhHHHhhhhhhh--Hhhh------hhhHHHHHHHhhcCCCCCCC
Q 015396 364 TIPLLTSYPYIAMLSGFGL--AFLL------NCASVVKNLLSSSGPGSKRS 406 (407)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~--~~~~------~~~~~~~~~~~~~~p~~~rs 406 (407)
.+++++.+.+......... ...+ ...........|.+|++.|+
T Consensus 395 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~ 445 (505)
T TIGR00898 395 AGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRN 445 (505)
T ss_pred HHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHh
Confidence 8777776555432211111 1111 11123345668899988775
No 47
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.95 E-value=1.6e-26 Score=220.94 Aligned_cols=285 Identities=14% Similarity=0.154 Sum_probs=218.4
Q ss_pred CchHHHHHHHHHHHHhhhhhhchhhhHHHHHH----------------------hhcccccccchhhHHHHHHHHHHHHH
Q 015396 38 LPITELFSIWIIVLCTALPISSLFPFLYFMIK----------------------DFQIAKREEDIGSYAGYVGSSFMFGR 95 (407)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~s~~~~~~~~~~g~~~~~~~~~~ 95 (407)
.++.....++.+..+.+.++.......+.+.+ +++.+..+ .|++.+.+.+++
T Consensus 16 ~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~g~~~s~~~~~~ 89 (465)
T TIGR00894 16 FRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGAL------QGLILSSHFYGQ 89 (465)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHH------hhHHHHHHHHHH
Confidence 34455556777777778888777777776665 67788887 999999999999
Q ss_pred HHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhcc--chHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhh
Q 015396 96 ALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS--VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGL 172 (407)
Q Consensus 96 ~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~ 172 (407)
.+++++.|+++||+|||+++..+.++++++.+++.++ .+++.+++.|+++|++.+...+. ..+++|++|+++|++++
T Consensus 90 ~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~ 169 (465)
T TIGR00894 90 IIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLL 169 (465)
T ss_pred HHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHH
Confidence 9999999999999999999999999999988876543 56888999999999999998886 99999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcCCCCCCCCc-ccccccccCCCChhHHHHHHHHHHHHHHHHh-ccccCCCCCCCCcchh
Q 015396 173 STVSTAWGIGLIIGPALGGFLAQPAEKYPNL-FSSESLFGKFPYFLPCLCISLFAFGVTIAAF-WLPETLHRHNDDDDSC 250 (407)
Q Consensus 173 ~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~-~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~~~~~~~~~~~~ 250 (407)
++...+..+|.+++|++++.+.+ . .|||..| ++.++..++..+.++ +.+|+|+.++..++++
T Consensus 170 ~~~~~~~~~g~~i~~~l~~~l~~-------~~~gw~~~f---------~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 233 (465)
T TIGR00894 170 GMSTSGFQLGTFIFLPISGWLCE-------SWGGWPMIF---------YVFGIVGCAWSLLWFVFPADDPSIHPCISKFE 233 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-------ccCCCCeeh---------hhhhHHHHHHHHHHHHHhcCCcccCCCCCHHH
Confidence 99999999999999999999987 3 2555544 777776665554444 4455554332221111
Q ss_pred hhhhhhhhhchhhhhhhhcccccccccccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHH
Q 015396 251 DVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLA 330 (407)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~ 330 (407)
+ +..++..+ .++++.+.+..++++++++.++...+..++.......+..++|.|+.+. +|++..+.++..+
T Consensus 234 ~---~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~-----~g~s~~~~g~~~~ 304 (465)
T TIGR00894 234 K---KYINSSLQ-GQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWV-----LRVSGKENGLLSS 304 (465)
T ss_pred H---HHHHhhcc-cccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCcChHHhHHHHH
Confidence 1 11111100 0000111234577889999999999988888888888888999888765 7899999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHhchh
Q 015396 331 ITGFSLLVFQLSLYPFLERILGPI 354 (407)
Q Consensus 331 ~~~~~~~~~~~~~~~~l~~~~~~~ 354 (407)
...++..++.. +.+++.||+++|
T Consensus 305 ~~~~~~~i~~~-~~g~l~d~~~~~ 327 (465)
T TIGR00894 305 LPYLFAWLCSI-FAGYLADFLKSS 327 (465)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHc
Confidence 99999998885 889999987644
No 48
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.95 E-value=2.4e-26 Score=213.87 Aligned_cols=267 Identities=21% Similarity=0.287 Sum_probs=208.2
Q ss_pred hhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhccc
Q 015396 54 ALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSV 133 (407)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~ 133 (407)
.+..+++.|.+|.+.+++|.++++ .+++.+++.++..++.++.|+++||+|||+++..+.++.+++.+.+.+++
T Consensus 4 ~~~~~~~~p~~~~~~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~ 77 (377)
T PRK11102 4 PLAIDMYLPALPVIAADFGVSAGS------VQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQ 77 (377)
T ss_pred chHHHHHhccHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHc
Confidence 345677889999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcccccccccC
Q 015396 134 NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGK 212 (407)
Q Consensus 134 ~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~~~~~ 212 (407)
+++.+++.|++.|++.+...+. .+++.|++|+++|++++++.+....+|..++|.+++.+.+ .
T Consensus 78 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~----------------~ 141 (377)
T PRK11102 78 TIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLV----------------W 141 (377)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------H
Confidence 9999999999999998887775 8999999999999999999999999999999999999987 3
Q ss_pred CCChhHHHHHHHHHHHHH-HHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccccccccccccchhHHHHHHH
Q 015396 213 FPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVY 291 (407)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (407)
++|+..+.+.++..++.. ...+++||+++.+++++.+.+ +.....++.+++++++...+..
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~ 203 (377)
T PRK11102 142 FSWHAIFWVLALAAILAAALVFFFIPETLPKERRQPFHLR------------------TTIRNFASLFRHKRVLGYMLAS 203 (377)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHhCCccCcccccCCCChH------------------HHHHHHHHHHcChHHHHHHHHH
Confidence 445555576666655543 344566765432211110000 0011344567788777666655
Q ss_pred HHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHHH
Q 015396 292 CVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIP 366 (407)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 366 (407)
++.......+....|.+..+. +|+++.+.+.......++..++.. ..+++.||+++|+.+..+..+..+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~-----~g~s~~~~g~~~~~~~~~~~~~~~-~~g~l~~r~g~~~~~~~~~~~~~~ 272 (377)
T PRK11102 204 GFSFAGMFSFLTAGPFVYIEL-----NGVSPQNFGYYFALNIVFLFVMTI-INSRFVRRVGALNMLRFGLWIQFI 272 (377)
T ss_pred HHHHHHHHHHHHcCHHHHHHH-----hCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCHHHHHHHHHHHHHH
Confidence 554444444444444444433 688999999999999999999985 889999999999998887765443
No 49
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.95 E-value=1.7e-26 Score=215.30 Aligned_cols=275 Identities=13% Similarity=0.095 Sum_probs=204.2
Q ss_pred HHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHH
Q 015396 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (407)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~ 121 (407)
.+..++...++..++...+....+.+.++++.++.+ .+++.+.+.+++.++.++.|+++||+|||++++++.++
T Consensus 4 ~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~ 77 (393)
T PRK11195 4 GFYAIMAAQFFSALADNALLFAAIALLKELHYPDWS------QPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGI 77 (393)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHH------HHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHH
Confidence 345567778888887776777777778999998888 99999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCC
Q 015396 122 VVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY 200 (407)
Q Consensus 122 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 200 (407)
.+++.+++.++.+. ++.|+++|++.+...|. .+++.|++|+++|++++++.+....+|.++||.++|++.+
T Consensus 78 ~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~----- 149 (393)
T PRK11195 78 KLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALAD----- 149 (393)
T ss_pred HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Confidence 99888877776664 78899999999998886 9999999999999999999999999999999999999987
Q ss_pred CCcccccccccCCCChhHHHHHHHHHHHHHHHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccccccccccc
Q 015396 201 PNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLK 280 (407)
Q Consensus 201 ~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (407)
+ .|+.++.+.+...++..+..+.+||++++.+.++.+.+...++ .....+.+++
T Consensus 150 --~----------~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~l~~ 203 (393)
T PRK11195 150 --P----------HAEAALAVCALIYLLAALFNLFIPRLGARRPGQSWNPIALLRD--------------FFHACRVLWR 203 (393)
T ss_pred --H----------HHHHHHHHHHHHHHHHHHHHhcCCCCcccccccCCCHHHHHHH--------------HHHHHHHHHh
Confidence 1 1344445444444444445567787654322111110000000 0012345677
Q ss_pred cchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHH
Q 015396 281 NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIA 360 (407)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 360 (407)
+|.++.......+...........++.|.++. +|.++.+.|.+....+++.++++. ..+++.||.++++.+..+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----lg~s~~~~G~~~~~~~~g~i~g~~-~~~~l~~~~~~~~~~~~g 277 (393)
T PRK11195 204 DKLGRFSLAGTTLFWGAGATLRFLVLAWAPVA-----LGITLNQPAYLQAVVAIGIAVGAG-AAARLVTLETVLRVLPAG 277 (393)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCChhHHHHHHHHHHHHHHHHHH-HHHHHhcCCcccchHHHH
Confidence 77766555444444444344444556666554 788999999999999999999985 778888888888777766
Q ss_pred HH
Q 015396 361 GV 362 (407)
Q Consensus 361 ~~ 362 (407)
..
T Consensus 278 ~~ 279 (393)
T PRK11195 278 IL 279 (393)
T ss_pred HH
Confidence 43
No 50
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.95 E-value=1e-25 Score=209.67 Aligned_cols=275 Identities=15% Similarity=0.154 Sum_probs=207.6
Q ss_pred HHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHH
Q 015396 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (407)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (407)
+.++.+....++..+......+.+|.+.+++|.|+.+ .|++.+.+.++..+++++.|+++||+|||+++..+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~------~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~ 79 (381)
T PRK03633 6 RPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQ------VGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASL 79 (381)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 4566777888888999999999999999999999998 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCC
Q 015396 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (407)
Q Consensus 121 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 199 (407)
+.+++.+.+++++|++.+++.|+++|++.+...+. .+.+.+..++++|+++++.+..+.++|..+||.+++.+.+.
T Consensus 80 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~--- 156 (381)
T PRK03633 80 IFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTE--- 156 (381)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc---
Confidence 99999999999999999999999999998887775 77788889999999999999999999999999999998761
Q ss_pred CCCcccccccccCCCChhHHHHHHHHHHHHHHHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhccccccccccc
Q 015396 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLL 279 (407)
Q Consensus 200 ~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (407)
..| ...|+. ..+...+..+.....+++ .. +++ +..+.++.+
T Consensus 157 ----~~~-----~~~~~~----~~~~~~~~~~~~~~~~~~--~~-~~~-----------------------~~~~~~~~~ 197 (381)
T PRK03633 157 ----LMS-----VLPWVT----GLVLAAILPLLFTRILNQ--QA-ENH-----------------------DSTSIWPML 197 (381)
T ss_pred ----ccc-----hHHHHH----HHHHHHHHHHHHhcccCC--CC-CCC-----------------------CCCCHHHHH
Confidence 111 111221 111111111111111211 10 000 011234456
Q ss_pred ccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHH
Q 015396 280 KNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARI 359 (407)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 359 (407)
+++.++......++..........+.|.|..+ .|.+..+.+.+.+...++.++++. ..+++.||+++|+.+..
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~------~g~s~~~~g~~~~~~~~~~~~~~~-~~g~l~dr~~~~~~l~~ 270 (381)
T PRK03633 198 KLRQARLGVNGCIISGIVLGSLYGLMPLYLNH------QGMSDASIGFWMALLVSAGILGQW-PIGRLADRFGRLLVLRV 270 (381)
T ss_pred HhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHHh-hhHHHHHHcCcHHHHHH
Confidence 77776654433333333344455667877754 588888999999999999999985 78999999999998887
Q ss_pred HHHHHHHHHhh
Q 015396 360 AGVLTIPLLTS 370 (407)
Q Consensus 360 ~~~~~~~~~~~ 370 (407)
+..+..++...
T Consensus 271 ~~~~~~~~~~~ 281 (381)
T PRK03633 271 QVFVVILGSIA 281 (381)
T ss_pred HHHHHHHHHHH
Confidence 77766665543
No 51
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.95 E-value=1.3e-25 Score=209.92 Aligned_cols=311 Identities=16% Similarity=0.198 Sum_probs=219.9
Q ss_pred HHHHHHHHHhhhhhhchhhhHHH-HHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHH
Q 015396 44 FSIWIIVLCTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (407)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~ 122 (407)
..+....++.........|.++. +.+++|.+..+ .|++.+...++..+.+++.|+++||+|||+++..+.++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~------~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~ 86 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVM------VGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMR 86 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHH------HHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHH
Confidence 34556677777777888888884 56889999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCC
Q 015396 123 VIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYP 201 (407)
Q Consensus 123 ~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~ 201 (407)
.++.+.+.++++++.+++.|+++|++.+...+. .+++.|++|+++|++++++.+...++|..+||.+++++.+
T Consensus 87 ~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~------ 160 (400)
T PRK11646 87 AAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQ------ 160 (400)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------
Confidence 999999999999999999999999998887775 8999999999999999999999999999999999999973
Q ss_pred CcccccccccCCCChhHHHHHHHHHHHHH-HHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccccccccccc
Q 015396 202 NLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLK 280 (407)
Q Consensus 202 ~~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (407)
.| |+..+++.++..++.. +..++.||.+.. +.+ + +....+++.++
T Consensus 161 --~g---------~~~~f~~~~~~~~~~~i~~~~~~~~~~~~---~~~--~------------------~~~~~~~~~~~ 206 (400)
T PRK11646 161 --YD---------FRLVCATGAVLFVLAAAFNAWLLPAYKLS---TVR--T------------------PVREGMTRVLR 206 (400)
T ss_pred --hh---------HHHHHHHHHHHHHHHHHHHHHhCCccccc---ccc--h------------------hhHHHHHHHHc
Confidence 23 4444566665544433 333445542211 000 0 01113456677
Q ss_pred cchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHH
Q 015396 281 NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIA 360 (407)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 360 (407)
+++++...+..+...........+.|.|..+ .+.++.+.+.+.+..+++...+.....++.+||++.++.+..+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~------~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 280 (400)
T PRK11646 207 DKRFVTYVLTLTGYYMLAVQVMLMLPIMVND------IAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAG 280 (400)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHhhhhhHHh------hcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHH
Confidence 8887765554444333333334456776655 3346778888888877777666655777777777777766777
Q ss_pred HHHHHHHHhhhhHHHhhhhhhhHhhh-hhh-----HHHHHHHhhcCCCCCCC
Q 015396 361 GVLTIPLLTSYPYIAMLSGFGLAFLL-NCA-----SVVKNLLSSSGPGSKRS 406 (407)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~p~~~rs 406 (407)
..+..++...+...+..........+ +.. ........+..|++.|+
T Consensus 281 ~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g 332 (400)
T PRK11646 281 LLIMSLSMFPIGMVSNLQQLFTLICLFYIGSIIAEPARETLSASLADARARG 332 (400)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccch
Confidence 76666666655544433222111111 111 12245566788887775
No 52
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.95 E-value=9.3e-27 Score=205.94 Aligned_cols=291 Identities=14% Similarity=0.132 Sum_probs=241.1
Q ss_pred CCchHHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHH
Q 015396 37 GLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII 116 (407)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~ 116 (407)
+.+.++++.-++.....++...+..++.+.+.+++|+|++| .+++.++..+...+..++.|.+.||+|.|++..
T Consensus 10 ~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q------~~ll~aiPil~GallRl~~g~l~drfGgR~~~~ 83 (417)
T COG2223 10 RIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQ------KGLLVAIPILVGALLRLPYGFLTDRFGGRKWTI 83 (417)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHH------HHHHHHHHHHHhHHHHHHHHhhhcccCchHHHH
Confidence 34457777777888888888999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccch---HHHHHHHHHHHhhhccchhHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhh
Q 015396 117 MGTASVVIFNTLFGLSVN---FWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (407)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~---~~~l~~~r~l~G~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 193 (407)
++.++..+-++..+++.+ +|++++.+++.|++.+.+....+++++++|+|++|.++|+.. ..|+|..+..+++..+
T Consensus 84 ~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v 162 (417)
T COG2223 84 LSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLV 162 (417)
T ss_pred HHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHH
Confidence 999999999998888754 459999999999999999888999999999999999999999 8999999998888888
Q ss_pred cCCCCCCCCcccccccccCCCChhHHHHHHHHHHH-HHHHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccc
Q 015396 194 AQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFG-VTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREA 272 (407)
Q Consensus 194 ~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (407)
.. .+|+- .|+....+..+..++ .+..++.+.|.|+.+...++.. +
T Consensus 163 ~~-------~~g~~------~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~---------------------~ 208 (417)
T COG2223 163 AV-------AFGFL------AWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQL---------------------P 208 (417)
T ss_pred HH-------HHhhH------HHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccc---------------------h
Confidence 87 44410 144444555555444 4444555666555322221111 0
Q ss_pred cccccccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhc
Q 015396 273 TPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG 352 (407)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 352 (407)
...+.++++++.|.+.+.|+.......++..++|.|+.++ +|.+..++|.......+.+.+.+ +++|+++||+|
T Consensus 209 ~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~-----fg~~~~~Ag~~a~~f~~~g~l~R-p~GG~LsDR~G 282 (417)
T COG2223 209 AQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQ-----FGLSPVTAGLIAFLFPLIGALAR-PLGGWLSDRIG 282 (417)
T ss_pred hHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCChhhHHHHHHHHHHHHHHHH-hccchhhhhcc
Confidence 2456678899999999999999999999999999999988 89999999999999999999998 59999999999
Q ss_pred hhHHHHHHHHHHHHHHhhhhHH
Q 015396 353 PIMVARIAGVLTIPLLTSYPYI 374 (407)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~ 374 (407)
.+|++...+..+.++.......
T Consensus 283 g~rv~~~~f~~~~~~~~~l~~~ 304 (417)
T COG2223 283 GRRVTLAVFVGMALAAALLSLF 304 (417)
T ss_pred chhHHHHHHHHHHHHHHHHHcc
Confidence 9999988888887777665443
No 53
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.95 E-value=1.6e-25 Score=209.96 Aligned_cols=276 Identities=20% Similarity=0.143 Sum_probs=196.1
Q ss_pred hHHHHHHHHHHHHhhhhhhchhhhHHH-HHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHH
Q 015396 40 ITELFSIWIIVLCTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (407)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~ 118 (407)
++.+..+....++..++..+..|.+|. +.+++|.++.+ .|++.+++.++..+++++.|+++||+|||+++..+
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~------~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~ 87 (399)
T PRK05122 14 TLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFL------AGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFG 87 (399)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHH------HHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHH
Confidence 366777888899999999999999996 56889999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcc--------chHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHh
Q 015396 119 TASVVIFNTLFGLS--------VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPAL 189 (407)
Q Consensus 119 ~~~~~~~~~~~~~~--------~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~ 189 (407)
.++.+++.+.+.++ .+++.+++.|+++|++.+...+. .+++.|++|+++|++++++...+..+|.++||.+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l 167 (399)
T PRK05122 88 LCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPL 167 (399)
T ss_pred HHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHH
Confidence 98888776655442 25678999999999998887775 8889999999999999999999999999999999
Q ss_pred hhhhcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhc
Q 015396 190 GGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEG 269 (407)
Q Consensus 190 ~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (407)
++.+.+ ..+|+..+.+.++..++..+.....|+.++. ++++ +
T Consensus 168 ~~~l~~----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~------------------ 209 (399)
T PRK05122 168 GVLLYH----------------WGGLAGLGLLIMLLALLGLLLARPRPAVPPV---KGER-L------------------ 209 (399)
T ss_pred HHHHHH----------------cccHHHHHHHHHHHHHHHHHHHhcCCCCCCC---Cccc-h------------------
Confidence 999987 4445544455555444333332222222111 0000 0
Q ss_pred ccccccccccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHH
Q 015396 270 REATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLER 349 (407)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 349 (407)
+.++.++ +.+.......+..........+.+.|..+ .|++ +.+......+++..++.. ..+++.|
T Consensus 210 ----~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~--~~~~~~~~~~~~~~~~~~-~~g~l~~ 274 (399)
T PRK05122 210 ----PFRRVLG--RVWPYGMGLALASIGFGTIATFITLYYAA------RGWD--GAALALTLFGVAFVGARL-LFGNLIN 274 (399)
T ss_pred ----hHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cccc--cchHHHHHHHHHHHHHHH-HHHHHHH
Confidence 0111111 11211122222222333344456666543 3432 345566677778888774 7889999
Q ss_pred HhchhHHHHHHHHHHHHHHhhhhHH
Q 015396 350 ILGPIMVARIAGVLTIPLLTSYPYI 374 (407)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (407)
|+++++.+..+..+..++...+...
T Consensus 275 r~~~~~~~~~~~~~~~~~~~~~~~~ 299 (399)
T PRK05122 275 RLGGLRVAIVSLLVEILGLLLLWLA 299 (399)
T ss_pred HhccHHHHHHHHHHHHHHHHHHHHh
Confidence 9999998888877777766655443
No 54
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.95 E-value=2.4e-25 Score=207.00 Aligned_cols=274 Identities=16% Similarity=0.173 Sum_probs=199.7
Q ss_pred HHHHHhhhhhhchhhhHHH-HHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHH-HHHHHHHH
Q 015396 48 IIVLCTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM-GTASVVIF 125 (407)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~-~~~~~~~~ 125 (407)
+..++..+......|.+|. +.+++|.++.+ .|++.+++.+...+.+++.|+++||+||||.++. +.++..++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~ 77 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAM------IGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALA 77 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHH
Confidence 4567778888889999996 46789999999 9999999999999999999999999999887654 56666677
Q ss_pred HHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhh--hHHHHHHHHHHHHHHHHhhhhhcCCCCCCCC
Q 015396 126 NTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALG--LSTVSTAWGIGLIIGPALGGFLAQPAEKYPN 202 (407)
Q Consensus 126 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~--~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~ 202 (407)
.++++++++++.+++.|++.|.+.+...|. .++..|+.|+++|++. .+....+.++|.+++|.+++.+.+
T Consensus 78 ~~~~~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~------- 150 (375)
T TIGR00899 78 CLLFAWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLAL------- 150 (375)
T ss_pred HHHHHhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHH-------
Confidence 788888999999999999998876666675 7888898888777754 577788889999999999999987
Q ss_pred cccccccccCCCChhHHHHHHHHHHHHHHH-HhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhccccccccccccc
Q 015396 203 LFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKN 281 (407)
Q Consensus 203 ~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (407)
.++|+.++++.++..++..+. .+++||.+++.+++++ ..+.++.+++
T Consensus 151 ---------~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~ 198 (375)
T TIGR00899 151 ---------GFGFTVMFLTAALAFVLCGVLVWLFLPSYPRGAPGALT-----------------------RLEVRGLLAS 198 (375)
T ss_pred ---------hcccHHHHHHHHHHHHHHHHHHHHhCCCcccCcccccC-----------------------cchhhhhhcC
Confidence 445555557777765554443 4557876543211100 0012234566
Q ss_pred chhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHH
Q 015396 282 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAG 361 (407)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 361 (407)
++++......++...........+|.|+.+. +|.++.+.+.+.....+...++. ++.+++.||+++|+.+..+.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~g~~~~~~~~~~~~~~-~~~g~l~~r~g~~~~~~~~~ 272 (375)
T TIGR00899 199 RDTRLLFVACTLMWGCNILYIINMPLLIIHE-----LGLPDKLAGLMMGTAAGLEIPFM-LLAGYLIKRFGKRRLMLLAA 272 (375)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhhHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHH-HhHHHHHHHhcchhHHHHHH
Confidence 6666555444444443334444566665443 68888888888877766666666 47899999999999888776
Q ss_pred HHHHHHHhhhh
Q 015396 362 VLTIPLLTSYP 372 (407)
Q Consensus 362 ~~~~~~~~~~~ 372 (407)
....+....+.
T Consensus 273 ~~~~~~~~~~~ 283 (375)
T TIGR00899 273 LAGVAFYTGLA 283 (375)
T ss_pred HHHHHHHHHHH
Confidence 66555544433
No 55
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.95 E-value=4.7e-27 Score=229.50 Aligned_cols=311 Identities=16% Similarity=0.136 Sum_probs=231.9
Q ss_pred HHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHH
Q 015396 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (407)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~ 124 (407)
..++..+...+..+...+.++.+.++|+++..+ .|++.+.+.++++++.++.|++.||+||||.+.++.++.++
T Consensus 37 ~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~------~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~l 110 (633)
T TIGR00805 37 LLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSS------SGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGL 110 (633)
T ss_pred HHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCc------ceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHH
Confidence 344466666667788889999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHhhccc---------------------------------------------------hHHHHHHHHHHHhhhccchh
Q 015396 125 FNTLFGLSV---------------------------------------------------NFWMAVLTRFLLGSLNGLLG 153 (407)
Q Consensus 125 ~~~~~~~~~---------------------------------------------------~~~~l~~~r~l~G~~~g~~~ 153 (407)
+++++++.+ .+..++++|+++|++.+...
T Consensus 111 g~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~ 190 (633)
T TIGR00805 111 GSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIF 190 (633)
T ss_pred HHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcch
Confidence 999887753 24567899999999999988
Q ss_pred HH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCC---------cccccccccCCCChhHHHHHH
Q 015396 154 PI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPN---------LFSSESLFGKFPYFLPCLCIS 223 (407)
Q Consensus 154 ~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~---------~~gw~~~~~~~~~~~~~~~~~ 223 (407)
+. .+++.|++|+++|++.+++++.+..+|.++|+++++++.+...+|.. ..+||| ..+||..+++.+
T Consensus 191 ~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprW---iGaWwl~Fli~g 267 (633)
T TIGR00805 191 PLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRW---IGAWWIGFLICG 267 (633)
T ss_pred hcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccH---HHHHHHHHHHHH
Confidence 86 99999999999999999999999999999999999999863222210 011222 224788888888
Q ss_pred HHHHHHHHHHhccccCCCCCCCCcchhhhhhhhhhhchhhh-h---hhhcccccccccccccchhHHHHHHHHHHhhccc
Q 015396 224 LFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEV-K---EEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDM 299 (407)
Q Consensus 224 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (407)
++.++..+.++++|++.+....+.+.+....+..+...++. . +..++.....+.+++||.++...+..++......
T Consensus 268 ~l~~l~~v~l~~~p~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~ 347 (633)
T TIGR00805 268 GVALLTSIPFFFFPKALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFN 347 (633)
T ss_pred HHHHHHHHHHHhCccccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 87777666666677654322111100000000000000000 0 0011122356678999999999999999988888
Q ss_pred hhhhHHhhhccCCCccCccccchhhHHHHHHHHHHH-HHHHHHhHHHHHHHHhc--hhHHHHHHHHHHHHHHhh
Q 015396 300 AYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFS-LLVFQLSLYPFLERILG--PIMVARIAGVLTIPLLTS 370 (407)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~ 370 (407)
++..++|.|++.. +|+++.+++++.....+. .+++. ++++++.||++ .++.+..+.++..++.+.
T Consensus 348 ~~~~~lP~yl~~~-----~g~s~~~ag~l~~~~~i~~~~vG~-~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~ 415 (633)
T TIGR00805 348 GYITFLPKYLENQ-----YGISSAEANFLIGVVNLPAAGLGY-LIGGFIMKKFKLNVKKAAYFAICLSTLSYLL 415 (633)
T ss_pred HHHHHHHHHHHHH-----cCCcHHHHHHHhhhhhhhHHHHHH-hhhhheeeeecccHHHHHHHHHHHHHHHHHH
Confidence 9999999999876 899999999998887764 45555 58999999887 556777766666665544
No 56
>PRK12382 putative transporter; Provisional
Probab=99.95 E-value=1.8e-25 Score=209.03 Aligned_cols=275 Identities=16% Similarity=0.174 Sum_probs=189.2
Q ss_pred HHHHHHHHHHHHhhhhhhchhhhHHH-HHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHH
Q 015396 41 TELFSIWIIVLCTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (407)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (407)
+.++.+....++..+..++..|.+|. +.+++|.|..+ .|++.+++.++..+++++.|+++||+||||++..+.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~------~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~ 88 (392)
T PRK12382 15 FSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTM------VGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGM 88 (392)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHH------HHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHH
Confidence 44556666777788888899999995 56899999999 999999999999999999999999999999999988
Q ss_pred HHHHHHHHHhh---c-----cchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhh
Q 015396 120 ASVVIFNTLFG---L-----SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (407)
Q Consensus 120 ~~~~~~~~~~~---~-----~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 190 (407)
+...++.+.+. . .++++.+++.|+++|++.+...+. .+++.|++|+|+|++++++.+.+..+|..++|+++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~ 168 (392)
T PRK12382 89 LACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLG 168 (392)
T ss_pred HHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHH
Confidence 87776554321 1 357899999999999998887775 88899999999999999999999999999999999
Q ss_pred hhhcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcc
Q 015396 191 GFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGR 270 (407)
Q Consensus 191 ~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (407)
+++.+ .++|+..+.+..+..++........||.+++ ++++ +
T Consensus 169 ~~l~~----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~------------------- 209 (392)
T PRK12382 169 LLLHS----------------HFGFAALALTTMVLPLLAWAFNGTVRKVPAH---AGER-P------------------- 209 (392)
T ss_pred HHHHh----------------ccChHHHHHHHHHHHHHHHHHHHhccCCCCC---cccC-c-------------------
Confidence 99987 3445544444433333222222222322111 0000 0
Q ss_pred cccccccccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 015396 271 EATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI 350 (407)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 350 (407)
+.++..+ .++...+...+..........+.+.|..+ .+++. .+......+++.++++. ..+++.||
T Consensus 210 ---~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~------~~~~~--~~~~~~~~~~~~~~~~~-~~g~l~~r 275 (392)
T PRK12382 210 ---SLWSVVG--LIWKPGLGLALQGVGFAVIGTFVSLYFAS------KGWAM--AGFTLTAFGGAFVLMRV-LFGWMPDR 275 (392)
T ss_pred ---hHHHHHH--HHHHhHHHHHHHHHHHhHHHHHHHHHHHh------cCCch--hHHHHHHHHHHHHHHHH-HHHHHHHh
Confidence 0011111 11111111122222223344455666544 34433 45556666777777774 78899999
Q ss_pred hchhHHHHHHHHHHHHHHhhhhHH
Q 015396 351 LGPIMVARIAGVLTIPLLTSYPYI 374 (407)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~ 374 (407)
+++|+.+..+..+..++...+...
T Consensus 276 ~g~~~~~~~~~~~~~~~~~~~~~~ 299 (392)
T PRK12382 276 FGGVKVAIVSLLVETVGLLLLWLA 299 (392)
T ss_pred cCCCeehHHHHHHHHHHHHHHHHc
Confidence 999999888887777776655443
No 57
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.95 E-value=3.1e-25 Score=207.39 Aligned_cols=303 Identities=13% Similarity=0.078 Sum_probs=220.8
Q ss_pred HHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHH
Q 015396 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (407)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~ 121 (407)
.+..++...+..++..+...|.+|.+++++|.++.+ .|++.+.+.+++.+++++.|++.||+|||+++..+.++
T Consensus 4 ~~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~------~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l 77 (410)
T TIGR00885 4 PFALITSLFALWGFANDITNPMVPQFQQAFTLTAFQ------AALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFL 77 (410)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHH
Confidence 345667777788888899999999999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHhhc---cchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCC
Q 015396 122 VVIFNTLFGL---SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (407)
Q Consensus 122 ~~~~~~~~~~---~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 197 (407)
.+++.+++.. .++++.+++.|++.|++.|...+. .+++.+..|+++|++.+++.+...++|..++|.+++.+....
T Consensus 78 ~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~ 157 (410)
T TIGR00885 78 YALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSN 157 (410)
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999887643 468999999999999999998775 889999999999999999999999999999999999886421
Q ss_pred CCCCCc-cccccc---------ccCCCChhHHHHHHHHHHHHHHHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhh
Q 015396 198 EKYPNL-FSSESL---------FGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEE 267 (407)
Q Consensus 198 ~~~~~~-~gw~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (407)
...... .-+... -...+||.++.+.++..++..+...+.++++.++ ++++ +
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~-~~~~--~---------------- 218 (410)
T TIGR00885 158 LPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNH-SDAK--Q---------------- 218 (410)
T ss_pred CccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc-cccc--c----------------
Confidence 000000 000000 0013477777777776655443333222111110 0000 0
Q ss_pred hcccccccccccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHH
Q 015396 268 EGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFL 347 (407)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l 347 (407)
.+.....++++|+|.++...+..+++...+.+..++++.|..+.. .+.+....+...+.......++++ +++++
T Consensus 219 -~~~~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~----~~~~~~~a~~~~~~~~~~~~vGR~-~~~~l 292 (410)
T TIGR00885 219 -ISFSASLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLI----PGMTAGFAANYNIGAMVIFFISRF-IGTWL 292 (410)
T ss_pred -ccchhhHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 001113346778888888888888887777777778888775421 234444445555555566777774 89999
Q ss_pred HHHhchhHHHHHHHHHHHHHHhhhhHHH
Q 015396 348 ERILGPIMVARIAGVLTIPLLTSYPYIA 375 (407)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (407)
.||+++|+.+.+......+.+++..+.+
T Consensus 293 ~~r~~~~~~l~i~~~~~~~~~ll~~~~~ 320 (410)
T TIGR00885 293 ISYLAAHKVLMAYAIIGMALCLGSIFAG 320 (410)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999998888887777777665543
No 58
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.95 E-value=2.5e-25 Score=208.18 Aligned_cols=266 Identities=16% Similarity=0.255 Sum_probs=203.8
Q ss_pred chHHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHH
Q 015396 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (407)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~ 118 (407)
+++.+.......++..+....+.|.+|.+.+++|.++.+ .+++.+.+.++..+++++.|+++||+|||+.+..+
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~ 79 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGA------VQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVG 79 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHH
Confidence 456666666666677788888899999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCC
Q 015396 119 TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (407)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 197 (407)
.++..++.+++.++++++.+++.|++.|++.+...+. ..+..|.+++++|+++++..+.+..+|..++|.+++.+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~-- 157 (394)
T PRK11652 80 MSIFILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTT-- 157 (394)
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 9999999999989999999999999999988876665 7888999999999999999999999999999999999987
Q ss_pred CCCCCcccccccccCCCChhHHHHHHHHHHHH-HHHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccccccc
Q 015396 198 EKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKK 276 (407)
Q Consensus 198 ~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (407)
..+|+.++.+.++..++. ++..++.||+++.++++++ .....+
T Consensus 158 --------------~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~ 201 (394)
T PRK11652 158 --------------LFGWRACYLFLLLLGAGVTFSMARWMPETRPADARRTR----------------------VLASYR 201 (394)
T ss_pred --------------ccChHHHHHHHHHHHHHHHHHHHHhCCccCccccchhH----------------------HHHHHH
Confidence 344555557666555443 3344566775432211100 011344
Q ss_pred cccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchh
Q 015396 277 SLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI 354 (407)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 354 (407)
..++++.++...+..+........+....+.+..+. +|+++.+.+++.....++.++++. +.+++.||.+++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~g~~-~~~~l~~~~~~~ 273 (394)
T PRK11652 202 TLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAV-----LGLSSMTVSILFILPIPAAFFGAW-FAGRPNKRFSTL 273 (394)
T ss_pred HHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 566777776655544444433333344444454443 788899999988888888887774 778888888743
No 59
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.95 E-value=2.1e-25 Score=211.85 Aligned_cols=284 Identities=13% Similarity=0.082 Sum_probs=200.2
Q ss_pred CCchHHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHH
Q 015396 37 GLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII 116 (407)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~ 116 (407)
..+|..+...++...........+....|.+.+++|.+.++ .+++.+.+.++..++.++.|+++||+|||++++
T Consensus 15 ~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~------~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~ 88 (455)
T TIGR00892 15 GWGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSE------TAWISSIMLAVLYAGGPISSILVNRFGCRPVVI 88 (455)
T ss_pred CcchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhH------HHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHH
Confidence 34454554555555544455566778889999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccchHHHHHH-HHHHHhhhccchhH-HHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhc
Q 015396 117 MGTASVVIFNTLFGLSVNFWMAVL-TRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (407)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~l~~-~r~l~G~~~g~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 194 (407)
.+.++..+++++++++++++.+++ .|++.|++.+...+ ..+++.++++ ++|++++++.+.+..+|..++|.+++.+.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~ 167 (455)
T TIGR00892 89 AGGLLASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLF 167 (455)
T ss_pred hhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 999999999999999999998875 46999998887544 5788889986 78999999999999999999999999998
Q ss_pred CCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhcc-ccCCCCCCCCcchhhhhhhhhhhch-hhhhhhhcccc
Q 015396 195 QPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWL-PETLHRHNDDDDSCDVSYDALESAS-AEVKEEEGREA 272 (407)
Q Consensus 195 ~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 272 (407)
+ .++||.++++.++..++..+..+++ ++.+.+...+.++.+....+....+ +.....++..+
T Consensus 168 ~----------------~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (455)
T TIGR00892 168 E----------------SFGWRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINR 231 (455)
T ss_pred H----------------HhChHHHHHHHHHHHHHHHHHHHHhCCCCcccccccccccccCCCCCccccccccchhhhhhh
Confidence 8 3445555577776665544433333 2221111000000000000000000 00000000011
Q ss_pred cccccccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 015396 273 TPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI 350 (407)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 350 (407)
....+++++|.++...+..++..........+++.|..+ .|++..+.+.+.+..+++.++++. ..+++.||
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~------~g~s~~~~g~~~~~~~~~~~~~~~-~~g~l~d~ 302 (455)
T TIGR00892 232 FLDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD------KGVDEYEAAFLLSIIGFVDIFARP-SCGLIAGL 302 (455)
T ss_pred hcchHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHhcc
Confidence 112357788988888777777776666666777877654 688999999999999999998875 77888876
No 60
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.94 E-value=8.7e-26 Score=211.06 Aligned_cols=293 Identities=16% Similarity=0.133 Sum_probs=225.5
Q ss_pred HHHHHhhhhh-hchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHH
Q 015396 48 IIVLCTALPI-SSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFN 126 (407)
Q Consensus 48 ~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~ 126 (407)
...+..+... +...+.+..+.++.+....+ .+.+.+++.++++++.+++|.+.||++-.+.+..+.+++++..
T Consensus 52 ~~y~~~~~d~~si~~a~l~g~~edl~~~~~~------l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~ 125 (495)
T KOG2533|consen 52 YLYFHAYLDKSSIVNASLSGLKEDLKLVGNQ------LGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFG 125 (495)
T ss_pred HHHHHHhcchhcchhHHHcCCccccchhhhh------hhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHH
Confidence 3333434433 23333334456788888888 9999999999999999999999999999999999999999888
Q ss_pred HHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCccc
Q 015396 127 TLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFS 205 (407)
Q Consensus 127 ~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~g 205 (407)
++....+|++.+++.|++.|+.++...|+ ..+++.|+.+++|++.++++....++|+++|.+++..+.+ ..+.....|
T Consensus 126 ~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~-~~~~~~~~g 204 (495)
T KOG2533|consen 126 FLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFK-LNGSGGLAG 204 (495)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhh-hcCCCCcCC
Confidence 88888999999999999999999998886 9999999999999999999999999999999999999765 222222556
Q ss_pred ccccccCCCChhHHHHHHHHHHH-HHHHHhccccCCCCCCCCcchhhh-hhhhhhhchhhhhhhhcccccccccccccch
Q 015396 206 SESLFGKFPYFLPCLCISLFAFG-VTIAAFWLPETLHRHNDDDDSCDV-SYDALESASAEVKEEEGREATPKKSLLKNWP 283 (407)
Q Consensus 206 w~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (407)
||+.| ++.+++.++ .+++.+++|+.|.+..-.+++++. ..++.++...+..+++ .++..+++.+++|.
T Consensus 205 W~~~F---------iI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~dp~ 274 (495)
T KOG2533|consen 205 WRWLF---------IIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKELVVERLRESPSGGIENK-FKWKGFKEALKDPG 274 (495)
T ss_pred ceeeh---------hHHHHHHHHHHheEEEEecCChhhccccchHHHHHHHHHHHhccCCCcccc-cCHHHHHHHHhchh
Confidence 66665 888877766 455677899988754222222111 1112221211111111 45567788999999
Q ss_pred hHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHH----hchhHHHHH
Q 015396 284 LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI----LGPIMVARI 359 (407)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~ 359 (407)
+|...+..++......++..++|.|+.+. .|++..+++.+.....++++++.+ +.++++|| ..+|.....
T Consensus 275 vw~~~l~~~~~~lv~~~~~~~lpl~l~~~-----~~~s~~~a~~ls~~~~~~g~v~~i-~ag~lsdr~~~~~~~~~~~~~ 348 (495)
T KOG2533|consen 275 VWPFSLCYFFLKLVNYGFSYWLPLYLKSN-----GGYSELQANLLSTPYDVGGIVGLI-LAGYLSDRLKTIFARRLLFIV 348 (495)
T ss_pred HHHHHHHHHHHhhccccHHHHHHHHHHcC-----CCcChHHhccccchHHhhhHHHHH-HHHHHHHHHhhhHHHHHHHHH
Confidence 99999999999999999999999999883 679999999999999999999985 89999999 555555444
Q ss_pred HHHH
Q 015396 360 AGVL 363 (407)
Q Consensus 360 ~~~~ 363 (407)
...+
T Consensus 349 ~~~~ 352 (495)
T KOG2533|consen 349 FLCL 352 (495)
T ss_pred HHHH
Confidence 4333
No 61
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.94 E-value=4.6e-26 Score=214.67 Aligned_cols=284 Identities=13% Similarity=0.084 Sum_probs=210.8
Q ss_pred HHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHH
Q 015396 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (407)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~ 124 (407)
.+....++..+......+.+|.+.++++.++.+ .|++.+.+.++..+++++.|+++||+|||+++..+.++.++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~ 94 (417)
T PRK10489 21 AVFIARFISIFGLGLLGVAVPVQIQMMTGSTLQ------VGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGL 94 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------HHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHH
Confidence 344556677777888889999999999988888 99999999999999999999999999999999888777776
Q ss_pred HHHHhh-----ccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCC
Q 015396 125 FNTLFG-----LSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (407)
Q Consensus 125 ~~~~~~-----~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 198 (407)
+.+..+ ..++++.+++.|++.|++.+...+. .+++.|++|+++|+++.++.....++|..+||.+++.+.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~--- 171 (417)
T PRK10489 95 GFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIA--- 171 (417)
T ss_pred HHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHH---
Confidence 655443 2567899999999999988877665 8899999999999999999999999999999999999987
Q ss_pred CCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccccccccc
Q 015396 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSL 278 (407)
Q Consensus 199 ~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (407)
..| |++.+.+.++..++..+..+.+|+++++++++++..+ +.....+..
T Consensus 172 ----~~~---------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~------------------~~~~~~~~~ 220 (417)
T PRK10489 172 ----AGG---------VAWNYGLAAAGTFITLLPLLRLPALPPPPQPREHPLR------------------SLLAGFRFL 220 (417)
T ss_pred ----HHh---------hHHHHHHHHHHHHHHHHHHHhCCCCCCCCcccccchH------------------HHHHHHHHH
Confidence 333 4444466666655555556667765433211110000 001123456
Q ss_pred cccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHH
Q 015396 279 LKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 358 (407)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 358 (407)
+++|.++...+..++... ......++|.|..+. +|.++.+.+.+.+..+++..++.. +.+++.||.++++.+.
T Consensus 221 ~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~-----~g~~~~~~g~~~~~~~~g~~ig~~-~~~~l~~~~~~~~~l~ 293 (417)
T PRK10489 221 LASPVVGGIALLGGLLTM-ASAVRVLYPALADEV-----WQMGAAQIGLLYAAVPLGAALGAL-TSGWLAHSARPGLLML 293 (417)
T ss_pred HcChHHHHHHHHHHHHHH-HHhHHHhhHHHHHhc-----cCCChhHhHHHHHHHHHHHHHHHH-HHHHhhhccCcchHHH
Confidence 677776655544443332 234556777777665 688899999999999999999985 7889999877777777
Q ss_pred HHHHHHHHHHhhhhHHH
Q 015396 359 IAGVLTIPLLTSYPYIA 375 (407)
Q Consensus 359 ~~~~~~~~~~~~~~~~~ 375 (407)
.+..+..++.+.+.+.+
T Consensus 294 ~~~~~~~~~~~~~~~~~ 310 (417)
T PRK10489 294 LSTLGSFLAVGLFGLMP 310 (417)
T ss_pred HHHHHHHHHHHHHHccc
Confidence 77766666665544333
No 62
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.94 E-value=6.2e-25 Score=205.80 Aligned_cols=273 Identities=14% Similarity=0.175 Sum_probs=202.9
Q ss_pred HHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHH
Q 015396 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (407)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (407)
|.+....++.+..........+.++.+.+++|.++++ .|++.+.+.++..+++++.|+++||+||||++..+.+
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~------~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~ 86 (402)
T TIGR00897 13 LNLLWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQ------SASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLL 86 (402)
T ss_pred chhhHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHH------hHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHH
Confidence 5566677777777777777778888888999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHh---hc-cchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHH-HHHHHhhhhhc
Q 015396 121 SVVIFNTLF---GL-SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGL-IIGPALGGFLA 194 (407)
Q Consensus 121 ~~~~~~~~~---~~-~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~-~~~~~~~~~l~ 194 (407)
+.+++.+++ +. .++++.+++.|++.|++.+...+. .+.+.+++|+++|++++|+.+.+.++|. .++|.+++.+.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~ 166 (402)
T TIGR00897 87 LWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAI 166 (402)
T ss_pred HHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 988887654 23 357889999999999987776664 7888899999999999999999999997 58999999988
Q ss_pred CCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccccc
Q 015396 195 QPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATP 274 (407)
Q Consensus 195 ~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (407)
+ .+||+..+ |+..+.. .+..++..+..+|.+++.+++ ++ ++ .++..+.
T Consensus 167 ~-------~~g~~~~~----~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~-~~---------------~~~~~~~ 214 (402)
T TIGR00897 167 P-------AFGEMNTL----WSALAFV----LTGGVIALFSNKDIFTPQHMQ-TR-EK---------------FSELGKA 214 (402)
T ss_pred c-------ccchHHHH----HHHHHHH----HHHHHHHHhccCCCCCccccc-CC-cc---------------hhhHHHH
Confidence 7 44543322 3322211 111222233344432111110 00 00 0001113
Q ss_pred cccccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchh
Q 015396 275 KKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI 354 (407)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 354 (407)
.+.++++|+++...+..++..........+.|.|..+ +|++..+.+.+.....++..++.. ..+++.||+++|
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~------~g~s~~~~~~~~~~~~~~~~ig~~-~~g~l~dr~~~~ 287 (402)
T TIGR00897 215 ATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAE------LGFSTSEWLQIWGTFFFTNIVFNV-IFGIVGDKLGWM 287 (402)
T ss_pred HHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCChhHHHHHHHHHHHHHHHHHH-HHHHHHHhhcch
Confidence 4567889999888777777777777777788888754 688898999988888999999985 789999999988
Q ss_pred HHHH
Q 015396 355 MVAR 358 (407)
Q Consensus 355 ~~~~ 358 (407)
+...
T Consensus 288 ~~~~ 291 (402)
T TIGR00897 288 NTVR 291 (402)
T ss_pred hHHH
Confidence 7654
No 63
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.94 E-value=1.5e-25 Score=212.23 Aligned_cols=284 Identities=14% Similarity=0.063 Sum_probs=202.9
Q ss_pred HHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHH
Q 015396 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (407)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (407)
+.++...+.....+.....+....|.+.+ +|.++++ .++..+++.++..+++++.|+++||+|||+++..+.+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~------~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~ 99 (438)
T TIGR00712 27 QVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGE------LGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLI 99 (438)
T ss_pred HHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhH------hHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHH
Confidence 33344445556666666666777787775 5999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcc----chHHHHHHHHHHHhhhccchhH-HHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 121 SVVIFNTLFGLS----VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 121 ~~~~~~~~~~~~----~~~~~l~~~r~l~G~~~g~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
+.+++.++.+.. ++++.+.+.|++.|++.+...+ ....+.|++|+++|++++++.+.+..+|..++|.+.+...+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~ 179 (438)
T TIGR00712 100 LSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMA 179 (438)
T ss_pred HHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHH
Confidence 999888877654 4677888999999999888666 48889999999999999999999999999999888776544
Q ss_pred CCCCCCCcccccccccCCCChhHHHHHHHHHHHH-HHHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccc-c
Q 015396 196 PAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREA-T 273 (407)
Q Consensus 196 ~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 273 (407)
. .. +|+..+++.++..++. ++..+++||+++....++.++.+ ++..+...+.++.+.+.+ .
T Consensus 180 ~------~~---------~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 242 (438)
T TIGR00712 180 W------FN---------DWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYR--NDYPDDYNEKAEQELTAKEI 242 (438)
T ss_pred H------hh---------hhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhcc--cccccccccccccccchHHH
Confidence 1 23 4555557766665553 44456677765432211111000 000000000000000000 0
Q ss_pred ccccccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhch
Q 015396 274 PKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP 353 (407)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 353 (407)
..+.+++++.++...+..++..........+.|.|+.+. .|+++.+.+.......++.+++.. +.+++.||+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-----~g~s~~~~~~~~~~~~~~~~ig~~-~~g~l~dr~~~ 316 (438)
T TIGR00712 243 FMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEV-----KHFALDKSSWAYFLYEYAGIPGTL-LCGWMSDKVFK 316 (438)
T ss_pred HHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHc-----cCCChhhHHHHHHHHHHHHHHHHH-HHHHHHHHhcc
Confidence 112467888888887776666666667777888888765 688999999999999999999885 88999999854
Q ss_pred h
Q 015396 354 I 354 (407)
Q Consensus 354 ~ 354 (407)
+
T Consensus 317 ~ 317 (438)
T TIGR00712 317 G 317 (438)
T ss_pred C
Confidence 3
No 64
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.94 E-value=1.2e-24 Score=204.74 Aligned_cols=293 Identities=22% Similarity=0.350 Sum_probs=203.4
Q ss_pred HHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHH
Q 015396 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (407)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (407)
+....+++..++..+......+.+|.+.+++|.+..+. ...+.|++.+++.++..+++++.|+++||+|||+++..+.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 92 (408)
T PRK09874 14 RNLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSA-LNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSAL 92 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchh-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHH
Confidence 34556677888888888999999999999999887651 01124889999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccchHHHHHHHHHHHhhhccchhHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCC
Q 015396 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY 200 (407)
Q Consensus 121 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 200 (407)
+..++.+++...++++.+++.|++.|++.+.......++.|++|+++|++++++......+|..++|.+++.+.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~----- 167 (408)
T PRK09874 93 GMGIVMVLMGLAQNIWQFLILRALLGLLGGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLAD----- 167 (408)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Confidence 999999888889999999999999999866544457888999999999999999999999999999999999987
Q ss_pred CCcccccccccCCCChhHHHHHHHHHHHHHH-HHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhccccccccccc
Q 015396 201 PNLFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLL 279 (407)
Q Consensus 201 ~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (407)
.. +|+..+.+.++..++..+ ..+++||++++.++++ +.+. ++..+.+
T Consensus 168 --~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--------------------~~~~~~~ 215 (408)
T PRK09874 168 --SY---------GLRPVFFITASVLFLCFLVTLFCIRENFQPVSKKE-MLHM--------------------REVVTSL 215 (408)
T ss_pred --Hh---------CHHHHHHHHHHHHHHHHHHHHHHhccCcccccchh-hhHH--------------------HHHHHhC
Confidence 33 445444666665554433 3445565432211110 0000 0112334
Q ss_pred ccchhHHHH-HHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHH
Q 015396 280 KNWPLMSSI-IVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 358 (407)
Q Consensus 280 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 358 (407)
++++++... ....+..........+++.|..+... +........+.+....+++..++.. ..+++.||+++|+.+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~l~~~~~~~-~~g~l~dr~g~~~~~~ 292 (408)
T PRK09874 216 KNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAG--NVSNIAFISGMIASVPGVAALLSAP-RLGKLGDRIGPEKILI 292 (408)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cchHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhccccchhHH
Confidence 556554432 22233333333344455655544210 0011112345566666777777764 7889999999999988
Q ss_pred HHHHHHHHHHhhhhHH
Q 015396 359 IAGVLTIPLLTSYPYI 374 (407)
Q Consensus 359 ~~~~~~~~~~~~~~~~ 374 (407)
.+..+..+..+...+.
T Consensus 293 ~~~~~~~~~~~~~~~~ 308 (408)
T PRK09874 293 TALIFSVLLLIPMSFV 308 (408)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 8877766666554433
No 65
>PRK10054 putative transporter; Provisional
Probab=99.94 E-value=3.8e-25 Score=206.35 Aligned_cols=284 Identities=14% Similarity=0.179 Sum_probs=212.2
Q ss_pred HHHHHHHHHHHHhhhhhhchhhhHHHH-HHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHH
Q 015396 41 TELFSIWIIVLCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (407)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (407)
+.++.+....++...+.+...|.+|.+ .+++|.+..+ .|++.+.+.++..+++++.|+++||+|||+++..+.
T Consensus 7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~------~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~ 80 (395)
T PRK10054 7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDL------IGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAI 80 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHH
Confidence 345566677888888888999988854 5789999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCC
Q 015396 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (407)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 198 (407)
++..++.++.+++++++.+++.|.+.|.+.+...+. .++..|.+|+++|++++++.....++|.+++|.+++++.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~--- 157 (395)
T PRK10054 81 TAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM--- 157 (395)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---
Confidence 999999999999999999999998888876666665 8899999999999999999999999999999999998864
Q ss_pred CCCCcccccccccCCCChhHHHHHHHHHHHHHH-HHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhccccccccc
Q 015396 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKS 277 (407)
Q Consensus 199 ~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (407)
.||+ .++.+.++..++.++ ..+++||+++++++++ + +....++
T Consensus 158 -----~g~~---------~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~---~-------------------~~~~~~~ 201 (395)
T PRK10054 158 -----QSIN---------LPFWLAAICSAFPLVFIQIWVQRSEKAIATET---G-------------------SVWSPSV 201 (395)
T ss_pred -----hccC---------cHHHHHHHHHHHHHHHHHHHHhccccccccch---h-------------------hhhhhhh
Confidence 2344 444666665555433 3344565432211100 0 0012256
Q ss_pred ccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHH
Q 015396 278 LLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVA 357 (407)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 357 (407)
.+++++++...+..++.......+..+.+.|.... .+.+.+....+.+.....+.....+. ..+++.||.++|+.+
T Consensus 202 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~l 277 (395)
T PRK10054 202 LLQDKALLWFTCSGFLASFVSGAFASCISQYVMVV---ADSDFAEKVVAVVLPVNAAMVVSLQY-SVGRRLNAANIRPLM 277 (395)
T ss_pred hccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHh---cccchHHHHHHHHHHhhhhheeeehh-HHHHHHccCCchhHH
Confidence 78888888777666665555444444555554321 12566777788888888777777664 666777889999988
Q ss_pred HHHHHHHHHHHhhhhH
Q 015396 358 RIAGVLTIPLLTSYPY 373 (407)
Q Consensus 358 ~~~~~~~~~~~~~~~~ 373 (407)
..+..+..++...+.+
T Consensus 278 ~~~~~~~~~~~~~~~~ 293 (395)
T PRK10054 278 TAGTLCFVIGLVGFIF 293 (395)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8888777776665543
No 66
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.94 E-value=6.9e-25 Score=202.28 Aligned_cols=267 Identities=15% Similarity=0.086 Sum_probs=202.1
Q ss_pred hhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhccch
Q 015396 55 LPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVN 134 (407)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~ 134 (407)
.....+.|.+|.+.+++|.++++ .+++.+.+.++..+++++.|+++||+|||+++..+.++..++.+.+ .+++
T Consensus 14 ~~~~~~~~~lp~l~~~~~~s~~~------~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~ 86 (355)
T TIGR00896 14 PALTSVGPLLPQIRSALGMSFSV------AGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPG 86 (355)
T ss_pred CccccCcccHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hhcc
Confidence 34467789999999999999999 9999999999999999999999999999999999998888888777 7788
Q ss_pred HHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcccccccccCC
Q 015396 135 FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKF 213 (407)
Q Consensus 135 ~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~~~~~~ 213 (407)
.+.+++.|++.|++.+...+. ..++.|++| ++|++++++.+.+.++|..+++.+++.+.+ ..+ .
T Consensus 87 ~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~-------~~~-------~ 151 (355)
T TIGR00896 87 TALLFAGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQ-------HSG-------G 151 (355)
T ss_pred HHHHHHHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHH-------hhh-------h
Confidence 999999999999998876664 778888886 689999999999999999999999998876 111 1
Q ss_pred CChhHHHHHHHHHHHHHHHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccccccccccccchhHHHHHHHHH
Q 015396 214 PYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCV 293 (407)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (407)
+|+..+...++..++.. ..++|+.+++++++++ ......++.+|+|.++...+..++
T Consensus 152 ~w~~~f~~~~~~~~~~~--~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~ 208 (355)
T TIGR00896 152 HWQQALAWWALPALLAL--LAWIPQVRRRVAANQT---------------------TTRLTPVRIWRSPLAWQVTVFFGL 208 (355)
T ss_pred hHHHHHHHHHHHHHHHH--HHHhhhhccccCCCCC---------------------CCCCCCchhhcCHhHHHHHHHHHH
Confidence 24444455444333222 2334544322111000 011234567788888877666666
Q ss_pred HhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHh-chhHHHHHHHHHHHHHHhhhh
Q 015396 294 FSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL-GPIMVARIAGVLTIPLLTSYP 372 (407)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~ 372 (407)
..........+.|.|..+ .|++..+.+.+.+...++.++++. ..+++.||+ ++|+.+..+..+..++...+.
T Consensus 209 ~~~~~~~~~~~lp~~~~~------~g~~~~~~g~~~~~~~~~~i~~~~-~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 281 (355)
T TIGR00896 209 QSGLYYSLIGWLPAILIS------HGASAATAGSLLALMQLAQAASAL-LIPALARRVKDQRGIVAVLAVLQLVGLCGLL 281 (355)
T ss_pred HHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHHH-hHHHHHhhhccchHHHHHHHHHHHHHHHHHH
Confidence 666666677788888764 688999999999999999999985 888999999 456666666666666655444
Q ss_pred H
Q 015396 373 Y 373 (407)
Q Consensus 373 ~ 373 (407)
+
T Consensus 282 ~ 282 (355)
T TIGR00896 282 F 282 (355)
T ss_pred H
Confidence 3
No 67
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.94 E-value=1.8e-25 Score=208.62 Aligned_cols=276 Identities=17% Similarity=0.246 Sum_probs=221.0
Q ss_pred HhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhccc--hHHHHHHHHHHHh
Q 015396 69 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSV--NFWMAVLTRFLLG 146 (407)
Q Consensus 69 ~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G 146 (407)
.+++.+.++ .+++.+.++.|+.+++++.|+++||+|.|+++..+.++.++++++...+. +++.+++.|+++|
T Consensus 66 ~~~~ws~~~------k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqG 139 (466)
T KOG2532|consen 66 GEYDWSSTE------KGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQG 139 (466)
T ss_pred ceecCCHHH------HHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhH
Confidence 357777777 99999999999999999999999999999999999999999999998865 4568899999999
Q ss_pred hhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcccccccccCCCChhHHHHHHHH
Q 015396 147 SLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLF 225 (407)
Q Consensus 147 ~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~ 225 (407)
++.|...|+ ..+.+.|.|++||++..++...+..+|.+++-+++|++.+. .+||+++| ++.++.
T Consensus 140 l~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s------~~GW~sif---------Y~~g~~ 204 (466)
T KOG2532|consen 140 LGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCES------SLGWPSIF---------YVFGIV 204 (466)
T ss_pred HHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcc------CCCCchHH---------HHHHHH
Confidence 999998886 99999999999999999999999999999999999999982 25555555 888888
Q ss_pred HHHHHHHHh-ccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccccccccccccchhHHHHHHHHHHhhccchhhhH
Q 015396 226 AFGVTIAAF-WLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEI 304 (407)
Q Consensus 226 ~~~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (407)
+++..++++ +..|+|.+++.-.+++. +.+++...+.. .+++.+.+++++++++.+|...+..+........+..+
T Consensus 205 g~i~~~~w~~~~~d~P~~h~~is~~El---~~I~~~k~~~~-~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y 280 (466)
T KOG2532|consen 205 GLIWFILWFLFYSDSPSKHPNISEKEL---KYIEKGKSEAH-VKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTY 280 (466)
T ss_pred HHHHHHHHHHHhcCCcccCCCCCHHHH---HHHHhcccccc-cCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 887666654 44566655433222111 11111111111 11115678999999999999999999999999999999
Q ss_pred HhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhch---------hHHHHHHHHHHHHHHhhhhHHH
Q 015396 305 FSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP---------IMVARIAGVLTIPLLTSYPYIA 375 (407)
Q Consensus 305 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~ 375 (407)
.|.|+.+. +|++..+.|++.++..+...+..+ +.+.++||..+ |..-.++....++.++.+++..
T Consensus 281 ~PtY~~~V-----L~f~v~~~G~~salP~l~~~~~k~-~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~ 354 (466)
T KOG2532|consen 281 LPTYLKEV-----LGFDVRETGFLSALPFLAMAIVKF-VAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTS 354 (466)
T ss_pred hhHHHHHH-----hCCChhhhhHHHHHHHHHHHHHHH-HHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecC
Confidence 99999988 899999999999999999999985 88999998755 2333355555566666655554
No 68
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.94 E-value=4e-24 Score=198.91 Aligned_cols=281 Identities=15% Similarity=0.155 Sum_probs=210.7
Q ss_pred HHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHH----HHHHH
Q 015396 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVI----IMGTA 120 (407)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~----~~~~~ 120 (407)
.+....+..+...+...|++|.+.+++|.+..+ +|++.+++.+...++++++|+++||+|||+.. ..+..
T Consensus 8 ~l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~------ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 81 (382)
T TIGR00902 8 WLALGFFGYFCAYGIFLPFFPAWLKGIGLGEEM------IGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASA 81 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Confidence 355667777778899999999999999999999 99999999999999999999999999985433 22222
Q ss_pred HHHHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCC
Q 015396 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (407)
Q Consensus 121 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 199 (407)
+..+ ..+..+++++.+++.|+++|.+.+...|. .++..++ +++|++.++......++|.+++|++++.+.+
T Consensus 82 l~~~--~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~---- 153 (382)
T TIGR00902 82 IFAA--AFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIG---- 153 (382)
T ss_pred HHHH--HHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHH----
Confidence 2222 23446789999999999999887766665 6666554 4788999999999999999999999999998
Q ss_pred CCCcccccccccCCCChhHHHHHHHHHHHHHHHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhccccccccccc
Q 015396 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLL 279 (407)
Q Consensus 200 ~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (407)
.+|||..| .+..+..++.++ .+.++|++++.+++++ + +.+..+..++++
T Consensus 154 ---~~g~~~~f---------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~----------------~~~~~~~~~~~l 202 (382)
T TIGR00902 154 ---MFDEQNIL---------AILTAGLAFMLI-GFLIKPTIPPKDAIPE--D----------------ESQGDSAFIALL 202 (382)
T ss_pred ---HcChhHHH---------HHHHHHHHHHHH-HHHcCCCCCCCccccc--c----------------ccccchhHHHHH
Confidence 45555444 554443322222 2233333211111000 0 001122456788
Q ss_pred ccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHH
Q 015396 280 KNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARI 359 (407)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 359 (407)
|+|+++...+..++.......+..+.+.|+++ .|.+..++|.++....++.++.. ...+++.||+++|+.+.+
T Consensus 203 ~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~------~g~s~~~~g~l~~~~~~~~i~~~-~~~~~l~~r~g~~~~l~~ 275 (382)
T TIGR00902 203 KNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA------AGISASATGLLWGIGVLAEIIIF-AFSNKLFQNCSARDLLLI 275 (382)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------CCCCHhHHHHHHHHHHHHHHHHH-HHhHHHHhhCCHHHHHHH
Confidence 99999999888888888888888888888865 78999999999998888888886 488999999999999999
Q ss_pred HHHHHHHHHhhhhHHHhh
Q 015396 360 AGVLTIPLLTSYPYIAML 377 (407)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~ 377 (407)
+.+...+....+++.++.
T Consensus 276 ~~~~~~~~~~~~~~~~~~ 293 (382)
T TIGR00902 276 SAIACVGRWAIIGAIEAF 293 (382)
T ss_pred HHHHHHHHHHHHHhHhhH
Confidence 999998888877665543
No 69
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.94 E-value=1.8e-24 Score=202.30 Aligned_cols=275 Identities=15% Similarity=0.122 Sum_probs=194.8
Q ss_pred HHhhhhhhchhhhHHHHHHhhcc--cccccchhhHHHHHHH-----HHHHHHHHhhhhhhhcccccCChHHHHHHHHHHH
Q 015396 51 LCTALPISSLFPFLYFMIKDFQI--AKREEDIGSYAGYVGS-----SFMFGRALTSVFWGLVADRYGRKPVIIMGTASVV 123 (407)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~--s~~~~~~~~~~g~~~~-----~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~ 123 (407)
+.++++...+.+..+.+.+++.. ++++ .+...+ ...++..+++++.|+++||+|||+++..+.++..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~ 76 (394)
T TIGR00883 3 AVEWFDFYLYGFAAVLVFHTFFPPSGDPL------VALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMG 76 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCCCChH------HHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHH
Confidence 45677788888888888877654 3333 344333 3344456789999999999999999999999999
Q ss_pred HHHHHhhccchHH--------HHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhc
Q 015396 124 IFNTLFGLSVNFW--------MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (407)
Q Consensus 124 ~~~~~~~~~~~~~--------~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 194 (407)
++.++++++++++ .+++.|+++|++.+...+. .+++.|++|+++|++..+..+.+..+|..+++.++..+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~ 156 (394)
T TIGR00883 77 IGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLS 156 (394)
T ss_pred HHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988865 4889999999998887665 999999999999999999999999999999999887765
Q ss_pred CCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccccc
Q 015396 195 QPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATP 274 (407)
Q Consensus 195 ~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (407)
... +.... ..++|+.++.+.++..++..+.....||++++.+++++ +++...+
T Consensus 157 ~~~-------~~~~~-~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~ 209 (394)
T TIGR00883 157 YLL-------GDDAL-LEWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQEK-------------------HKKKRGP 209 (394)
T ss_pred Hhc-------CHHHh-hccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHhc-------------------cccccCC
Confidence 311 10000 04567777677666655555444455654432111000 0011223
Q ss_pred cccccccch--hHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhc
Q 015396 275 KKSLLKNWP--LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG 352 (407)
Q Consensus 275 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 352 (407)
.++.+++++ ++......++..........+.|.|..+. +|.+..+.+.......++..++.. +.+++.||++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~-~~g~l~dr~g 283 (394)
T TIGR00883 210 IRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQT-----LGLSANSALLVLMLSLILFFITIP-LSGALSDRIG 283 (394)
T ss_pred HHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHhc
Confidence 444555544 55555555555555556666778777554 688888999999988999988875 8899999999
Q ss_pred hhHHHHHHHHHH
Q 015396 353 PIMVARIAGVLT 364 (407)
Q Consensus 353 ~~~~~~~~~~~~ 364 (407)
+|+.+..+..+.
T Consensus 284 ~~~~~~~~~~~~ 295 (394)
T TIGR00883 284 RRPVLIIFTVLA 295 (394)
T ss_pred hHHHHHHHHHHH
Confidence 998776554443
No 70
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.93 E-value=2.9e-24 Score=197.56 Aligned_cols=290 Identities=24% Similarity=0.390 Sum_probs=233.2
Q ss_pred HHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHH
Q 015396 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (407)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~ 124 (407)
.+....+...+......+..|.+.+++|.+..+ .+++.+...++..+++++.|+++||+|||+.+..+.++..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~ 76 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQ------AGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFAL 76 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHH
Confidence 345567778888889999999999999999998 99999999999999999999999999999999999999999
Q ss_pred HHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCc
Q 015396 125 FNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL 203 (407)
Q Consensus 125 ~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~ 203 (407)
+.+...+.++++.+++.|++.|++.+...+. .+++.|++|+|+|++.+++.+....+|..++|.+++.+.+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-------- 148 (352)
T cd06174 77 GSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAE-------- 148 (352)
T ss_pred HHHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHH--------
Confidence 9999999999999999999999998887775 9999999999999999999999999999999999999987
Q ss_pred ccccccccCCCChhHHHHHHHHHHHHHHHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccccccccccccch
Q 015396 204 FSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWP 283 (407)
Q Consensus 204 ~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (407)
..+|+..+.+.++..++..+...+++ |.
T Consensus 149 --------~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------~~ 176 (352)
T cd06174 149 --------SLGWRWLFLILAILGLLLALLLLFLL--------------------------------------------RL 176 (352)
T ss_pred --------HhhHHHHHHHHHHHHHHHHHHHHHHH--------------------------------------------HH
Confidence 33455555776666665555444444 34
Q ss_pred hHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhH-HHHHHHH
Q 015396 284 LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIM-VARIAGV 362 (407)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~ 362 (407)
++...+..++..........+.+.+..+. .|.+..+.+.......++..++.. +.+++.||+++|+ .+..+..
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~ 250 (352)
T cd06174 177 LLLLALAFFLLSFGYYGLLTYLPLYLQEV-----LGLSAAEAGLLLSLFGLGGILGAL-LGGLLSDRLGRRRLLLLIGLL 250 (352)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhHHHHHHHH
Confidence 56666777777777777777888777664 588999999999999999999985 8889999999999 8888888
Q ss_pred HHHHHHhhhhHHHhhhhhhhHhh-hh-----hhHHHHHHHhhcCCCCCCC
Q 015396 363 LTIPLLTSYPYIAMLSGFGLAFL-LN-----CASVVKNLLSSSGPGSKRS 406 (407)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~p~~~rs 406 (407)
+..++...+...+.......... .+ ..........+..|++.|+
T Consensus 251 ~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 300 (352)
T cd06174 251 LAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARG 300 (352)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHH
Confidence 88888777665543221111111 11 1123455667777766653
No 71
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.93 E-value=4.1e-24 Score=197.22 Aligned_cols=310 Identities=12% Similarity=0.157 Sum_probs=214.0
Q ss_pred hhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhccccc-----CChHH-HHHHHHHHHHHHHHh
Q 015396 56 PISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-----GRKPV-IIMGTASVVIFNTLF 129 (407)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-----Grr~~-~~~~~~~~~~~~~~~ 129 (407)
....+.+.+|.+.+|+|+|.++ .|+..+. .+...+ .+++|+++||+ ||||. ++.+.++.++.....
T Consensus 3 ~~~~~~~~~~~~~~~~g~s~~~------~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l 74 (356)
T TIGR00901 3 PLGLVGNTLPYWLRSKNVSLKT------IGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLIL 74 (356)
T ss_pred CchhHHhHHHHHHHHcCCCHHH------HHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHH
Confidence 3456778899999999999999 9988655 444444 99999999998 89887 466777777776666
Q ss_pred hcc---chHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCccc
Q 015396 130 GLS---VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFS 205 (407)
Q Consensus 130 ~~~---~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~g 205 (407)
++. .+.+.+....++.+++.+...+. .+++.|++|+|+|+++.++...+.++|.++++.+++.+.+ .+|
T Consensus 75 ~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~-------~~g 147 (356)
T TIGR00901 75 SFLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLAS-------PEF 147 (356)
T ss_pred HcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhh-------hcc
Confidence 666 46667777777888877777675 9999999999999999999999999999999999999987 333
Q ss_pred ccccccCCCChhHHHHHHHHHHHHHHHHh-ccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccccccccccccch-
Q 015396 206 SESLFGKFPYFLPCLCISLFAFGVTIAAF-WLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWP- 283 (407)
Q Consensus 206 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 283 (407)
... +.+++||.++++.++..++..+..+ ..||+.+..+. ++ ++.. +.....+++++++.
T Consensus 148 ~~~-~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~~~~-~~-~~~~----------------~~~~~~~~~~~~~~~ 208 (356)
T TIGR00901 148 ANT-GLITLWGYIFFWTALLILPGLLVTLFLAKEPQEDASV-PK-PLTQ----------------AVLKPIREFFQRKNM 208 (356)
T ss_pred ccc-ccccccHHHHHHHHHHHHHHHHHHHHhccCCCccccc-ch-hHHH----------------HHHHHHHHHHHhcCc
Confidence 222 1255688888888887766555544 34664321111 00 0000 00113345566654
Q ss_pred --hHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHH-HHHHHHHhHHHHHHHHhchhHHHHHH
Q 015396 284 --LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGF-SLLVFQLSLYPFLERILGPIMVARIA 360 (407)
Q Consensus 284 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~ 360 (407)
++...+..++..........+.+.|..+ +|++..+.+.+....+. +.+++. ++++++.||+++|+.+..+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~g~~~~~~g~~~~~~~~~~~~~g~-~~~g~l~~r~g~~~~l~~~ 281 (356)
T TIGR00901 209 IQALLLLLLIVLYKLGDSAATVLTTLFLLD------MGFSKEEIALVAKINGLLGAILGG-LIGGIIMQPLNILYALLLF 281 (356)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHhHHHHHHHHHHHH-HHHHHHHhhhhHHHHHHHH
Confidence 5556666666666666677778877754 68899999988887774 555665 5889999999999998888
Q ss_pred HHHHHHHHhhhhHHH-hh-------hhhh-hHhhh--------hhhHHHHHHHhhcCCCCCCC
Q 015396 361 GVLTIPLLTSYPYIA-ML-------SGFG-LAFLL--------NCASVVKNLLSSSGPGSKRS 406 (407)
Q Consensus 361 ~~~~~~~~~~~~~~~-~~-------~~~~-~~~~~--------~~~~~~~~~~~~~~p~~~rs 406 (407)
.++.++....+.+.. .. ...+ ..... ...........+.+|++.|+
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g 344 (356)
T TIGR00901 282 GIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGA 344 (356)
T ss_pred HHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccH
Confidence 877776666544431 10 1111 11111 12234567789999998875
No 72
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.93 E-value=1.3e-23 Score=195.47 Aligned_cols=275 Identities=14% Similarity=0.126 Sum_probs=202.2
Q ss_pred HHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCCh----HHHHHHHHHHHHH
Q 015396 50 VLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRK----PVIIMGTASVVIF 125 (407)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr----~~~~~~~~~~~~~ 125 (407)
.+......+++.|.+|.+.+++|.|..+ +|++.+++.++..+++++.|+++||+||| +.+.+...+. .
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~g~s~~~------iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~ 84 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQGYTPET------IGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--A 84 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCCHHH------HHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--H
Confidence 4455566788999999999999999999 99999999999999999999999999994 3333222222 2
Q ss_pred HHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcc
Q 015396 126 NTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLF 204 (407)
Q Consensus 126 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~ 204 (407)
.......+++|.+++.|++.|++.+...+. .++..++ +++|+++++......++|.++||++++++.+
T Consensus 85 ~~~~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~--------- 153 (382)
T PRK11128 85 VAFWFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVS--------- 153 (382)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHH---------
Confidence 223344688999999999999987777775 6676666 4568888999999999999999999999998
Q ss_pred cccccccCCCChhHHHHHHHHHHHHHHHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccccccccccccchh
Q 015396 205 SSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPL 284 (407)
Q Consensus 205 gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (407)
+++|+.++++.++..++..+..++.||.+++.++++ + .++...++++++|+|++
T Consensus 154 -------~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----------------~~~~~~~~~~i~~~~~~ 207 (382)
T PRK11128 154 -------WFGEQAILWILTAGVASMLLGQLLRPTIMPQGESRQ---Q----------------ESAGWPAWKALLKEPTV 207 (382)
T ss_pred -------HcChhHHHHHHHHHHHHHHHHHHccCCCCCcccccc---c----------------cccccchHHHHHcChhH
Confidence 444555556665544444333344454322111000 0 00112356788999999
Q ss_pred HHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHH
Q 015396 285 MSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLT 364 (407)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 364 (407)
+...+..++..........+.+.|..+ .|++..+.|.+.+...++.++... ..+++.||+++++.+..+....
T Consensus 208 ~~~~~~~~l~~~~~~~~~~~~~~~~~~------~g~s~~~~g~~~~~~~~~~~~~~~-~~g~l~~r~~~~~~l~~~~~~~ 280 (382)
T PRK11128 208 WRFLLCVSLLQGSHAAYYGFSAIYWQA------AGYSASTIGYLWSLGVVAEVLIFA-FSNRLFRRWSARDLLLLSAICG 280 (382)
T ss_pred HHHHHHHHHHHHHhHhHHHHHHHHHHH------CCCCHhHHHHHHHHHHHHHHHHHH-HHHHHHHHCCHHHHHHHHHHHH
Confidence 988777777766666677777877753 688999999999988888888774 7889999999999998888887
Q ss_pred HHHHhhhhHHHh
Q 015396 365 IPLLTSYPYIAM 376 (407)
Q Consensus 365 ~~~~~~~~~~~~ 376 (407)
++..+.+.+.++
T Consensus 281 ~~~~~~~~~~~~ 292 (382)
T PRK11128 281 VVRWGLMGSTTA 292 (382)
T ss_pred HHHHHHHHhhhh
Confidence 777666555443
No 73
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.93 E-value=4.5e-24 Score=205.63 Aligned_cols=331 Identities=15% Similarity=0.128 Sum_probs=211.6
Q ss_pred hhchhhhHHHHHHhhcccccccchh-hHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhccchH
Q 015396 57 ISSLFPFLYFMIKDFQIAKREEDIG-SYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNF 135 (407)
Q Consensus 57 ~~~~~~~~~~~~~~~~~s~~~~~~~-~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~ 135 (407)
.....+....+.+....+....... ...+++.+...++..+++++.|+++|++|||+.++++.+.+.++.+++++++|+
T Consensus 63 ~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~ 142 (513)
T KOG0254|consen 63 IGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSW 142 (513)
T ss_pred cccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 4555666666665432222111000 114899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcccccccccCCC
Q 015396 136 WMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFP 214 (407)
Q Consensus 136 ~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~~~~~~~ 214 (407)
++++++|+++|+|.|..... +.+++|..|++.||...+..+....+|..++..++....+ . .++
T Consensus 143 ~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~-------~--------~~~ 207 (513)
T KOG0254|consen 143 YQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSK-------V--------YAG 207 (513)
T ss_pred HHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhcc-------C--------Ccc
Confidence 99999999999998887665 9999999999999999999999999999999655555443 0 135
Q ss_pred ChhHHHHHHHHHHHHHHHHhccccCCCCCCCCcchhhhhh--hhhhh--chhhhh-----------hhhc-ccccccccc
Q 015396 215 YFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSY--DALES--ASAEVK-----------EEEG-REATPKKSL 278 (407)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~--~~~~~--~~~~~~-----------~~~~-~~~~~~~~~ 278 (407)
||.++.+..+.+++..+..+++||+|++..++.+..+... ..+.. ..+... +... +.+..++++
T Consensus 208 Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 287 (513)
T KOG0254|consen 208 WRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGEL 287 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHh
Confidence 7777788888888877778899999988655433322221 11111 000000 0000 111123344
Q ss_pred cccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHH
Q 015396 279 LKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 358 (407)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 358 (407)
++........+...+..+.+.+.......|..+. .+..|.+... .......++...++.. ++..+.||+|||+++.
T Consensus 288 ~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~i--f~~~g~~~~~-~~~~~~~~~v~~~~t~-~~~~lvd~~gRr~lll 363 (513)
T KOG0254|consen 288 FSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTI--FKSAGLKSDT-FLASIILGVVNFLGTL-VATYLVDRFGRRKLLL 363 (513)
T ss_pred cCcchHHHHHHHHHHHHHHHHhCCceEEeehHHH--HHhcCCCCch-HHHHHHHHHHHHHHHH-HHHHHHHHhccHHHHH
Confidence 4422222233333333333332222222222222 2224444332 3444445555556553 6689999999999999
Q ss_pred HHHHHHHHHHhhhhHHHhhhhh---------hh----------HhhhhhhHHHHHHHhhcCCCCCCC
Q 015396 359 IAGVLTIPLLTSYPYIAMLSGF---------GL----------AFLLNCASVVKNLLSSSGPGSKRS 406 (407)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~---------~~----------~~~~~~~~~~~~~~~~~~p~~~rs 406 (407)
.+...+.++.+++......... +. ....+..+..+...+|.+|.+.|+
T Consensus 364 ~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~ 430 (513)
T KOG0254|consen 364 FGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRS 430 (513)
T ss_pred HhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHh
Confidence 9999988888876544322110 00 011111223345779999998886
No 74
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.92 E-value=1.7e-22 Score=188.77 Aligned_cols=273 Identities=15% Similarity=0.203 Sum_probs=181.5
Q ss_pred HHHHHHHHHhhhhhhchhhhHHH-HHHhhcccccccchhhHHHHHHHHHHH-HHHHhhhhhhhcccccCChHHH-HHHHH
Q 015396 44 FSIWIIVLCTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMF-GRALTSVFWGLVADRYGRKPVI-IMGTA 120 (407)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~g~~~~~~~~-~~~~~~~~~G~l~dr~Grr~~~-~~~~~ 120 (407)
....+..++..+......|.+|. +.+++|.++++ .|++.+...+ +..++.++.|+ +||+||||.+ ..+.+
T Consensus 18 ~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~------~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~ 90 (393)
T PRK15011 18 TAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAM------VGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCL 90 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHH
Confidence 34555677888888888899985 56889999999 9999876655 55555555555 9999999875 45566
Q ss_pred HHHHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchh--hhhHHHHHHHHHHHHHHHHhhhhhcCCC
Q 015396 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQA--LGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (407)
Q Consensus 121 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~--~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 197 (407)
...++..+.+++++++.+++.+.+.|...+...+. ..+..|+.++++|. ...++.+.+.++|.++||++++++.+
T Consensus 91 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~-- 168 (393)
T PRK15011 91 LGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAM-- 168 (393)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHH--
Confidence 66677777888899998876665555444455664 77888887766553 44578888999999999999999998
Q ss_pred CCCCCcccccccccCCCChhHHHHHHHHHHHHH-HHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccccccc
Q 015396 198 EKYPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKK 276 (407)
Q Consensus 198 ~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (407)
.++|+..++..++..++.. ...+++||.++.++..++ + . + ..+
T Consensus 169 --------------~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~-----------~--------~~~ 212 (393)
T PRK15011 169 --------------GFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKELPLATG--T-L-----------E--------APR 212 (393)
T ss_pred --------------hcChHHHHHHHHHHHHHHHHHHHhhcCccCCCCccccc--c-c-----------c--------ccc
Confidence 3445555577776655543 335567776432211100 0 0 0 000
Q ss_pred cccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHH
Q 015396 277 SLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMV 356 (407)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 356 (407)
+ +.+..+.......+.......+..+.|.|+++. +|++..+.+.+.+...++.+++. ++.+++.||+++|+.
T Consensus 213 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-----~~~~~~~~g~~~~~~~~~~i~~~-~~~G~l~dr~g~~~~ 284 (393)
T PRK15011 213 R--NRRDTLLLFVICTLMWGTNSLYIINMPLFIINE-----LHLPEKLAGVMMGTAAGLEIPTM-LIAGYFAKRLGKRFL 284 (393)
T ss_pred c--ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhChHHH
Confidence 0 112223333333333334444555677777654 78888889988887777777776 488999999999988
Q ss_pred HHHHHHHHHHHHh
Q 015396 357 ARIAGVLTIPLLT 369 (407)
Q Consensus 357 ~~~~~~~~~~~~~ 369 (407)
+..+.....+.+.
T Consensus 285 ~~~~~~~~~~~~~ 297 (393)
T PRK15011 285 MRVAAVAGVCFYA 297 (393)
T ss_pred HHHHHHHHHHHHH
Confidence 7766555544433
No 75
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.92 E-value=9.7e-23 Score=194.94 Aligned_cols=282 Identities=13% Similarity=0.156 Sum_probs=203.5
Q ss_pred hHHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhccccc-----CChHH
Q 015396 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-----GRKPV 114 (407)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-----Grr~~ 114 (407)
+++...++...+..+.......+.+|.+.++.|.+.++ +|.+ +.....+ ++.+++|+++||+ ||||.
T Consensus 11 ~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~------ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~ 82 (491)
T PRK11010 11 QPNSAILLILGFASGLPLALTSGTLQAWMTVENIDLKT------IGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRG 82 (491)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHH------HHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchH
Confidence 34566677777888888889999999999999999888 8886 3333443 6899999999999 99885
Q ss_pred -HHHHHHHHHHHHHHhhcc---chHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHh
Q 015396 115 -IIMGTASVVIFNTLFGLS---VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPAL 189 (407)
Q Consensus 115 -~~~~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~ 189 (407)
+..+.++.+++...+++. ++++.+.+.+++.|++.+...+. .++..|++|+++|+++.++...+..+|..+++.+
T Consensus 83 ~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l 162 (491)
T PRK11010 83 WLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGL 162 (491)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 667777777777666664 57888999999999988777775 9999999999999999999999999999999999
Q ss_pred hhhhcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhc
Q 015396 190 GGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEG 269 (407)
Q Consensus 190 ~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (407)
++++.+ . .++||.++++.++..++..+..++.||+++..+. +++.+ +
T Consensus 163 ~~~l~~-------~--------~~GWr~~f~i~a~l~ll~~l~~~~~~e~~~~~~~-~~~~~-----------------~ 209 (491)
T PRK11010 163 ALWLAD-------R--------YLGWQGMYWLMAALLIPCIIATLLAPEPTDTIPV-PKTLE-----------------Q 209 (491)
T ss_pred HHHHHh-------c--------ccCHHHHHHHHHHHHHHHHHHHHhcCCCcccccc-ccchh-----------------h
Confidence 999986 1 1355666677777766665555567775432111 00000 0
Q ss_pred ccccccccccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHH-HHHHHHHHHHHhHHHHHH
Q 015396 270 REATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLA-ITGFSLLVFQLSLYPFLE 348 (407)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~-~~~~~~~~~~~~~~~~l~ 348 (407)
+...+.++.++++..+...+..++..........+.+.|+.+. +|++..+.+.... ...++.+++. ++++++.
T Consensus 210 ~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~-----~G~s~~~~g~~~~~~g~i~~iiG~-ll~G~L~ 283 (491)
T PRK11010 210 AVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRG-----VGFDAGEVGLVNKTLGLLATIVGA-LYGGILM 283 (491)
T ss_pred hHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 0011344566667666655555555544444455566565433 7899999999875 4456777777 5899999
Q ss_pred HHhchhHHHHHHHHHHHHHH
Q 015396 349 RILGPIMVARIAGVLTIPLL 368 (407)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~ 368 (407)
||+++++.+.++.++..+..
T Consensus 284 dr~g~~~~l~i~~~l~~l~~ 303 (491)
T PRK11010 284 QRLSLFRALMIFGILQGVSN 303 (491)
T ss_pred HHHhHHHHHHHHHHHHHHHH
Confidence 99999887776665544433
No 76
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.92 E-value=1.7e-22 Score=189.39 Aligned_cols=276 Identities=14% Similarity=0.203 Sum_probs=200.7
Q ss_pred HHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhccccc-----CChH-HHHHHHH
Q 015396 47 WIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-----GRKP-VIIMGTA 120 (407)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-----Grr~-~~~~~~~ 120 (407)
...++..+...+.....+|.+.++.|.+.++ +|++..+... .+..+++|+++||+ |||| .+.++.+
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~------ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~ 76 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTVEGLDIQT------IGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQV 76 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHH
Confidence 4456677788888899999999999999999 9999777665 58999999999999 8875 6888888
Q ss_pred HHHHHHHHhhcc---chHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCC
Q 015396 121 SVVIFNTLFGLS---VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (407)
Q Consensus 121 ~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 196 (407)
+.+++....++. .+++.+++..++.++..+...+. .+++.|++|+|+|+++.++...+..+|..+++.+++.+.+
T Consensus 77 ~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~- 155 (402)
T PRK11902 77 GLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLAD- 155 (402)
T ss_pred HHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHh-
Confidence 887777776665 45777888878888777777775 9999999999999999999999999999999999999886
Q ss_pred CCCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccccccc
Q 015396 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKK 276 (407)
Q Consensus 197 ~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (407)
. .++|+.++++.++..++..+..+++||++++.+++++..+ +.....+
T Consensus 156 ------~--------~~gw~~~f~i~a~~~l~~~l~~~~~~e~~~~~~~~~~~~~------------------~~~~~~~ 203 (402)
T PRK11902 156 ------R--------VLGWGNTYLLMAGLMLAGALTTLWAPEPEVPARPPRSLGE------------------AVVGPLR 203 (402)
T ss_pred ------c--------ccCHHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHH------------------HHHHHHH
Confidence 1 1255666677777666555555666765443211110000 0112456
Q ss_pred cccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHH-HHHHHHHhHHHHHHHHhchhH
Q 015396 277 SLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGF-SLLVFQLSLYPFLERILGPIM 355 (407)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~ 355 (407)
+++++|.++...+..++..........+.+.++.+. +|+++.+.+.+....++ +.+++. .+.+++.||+++|+
T Consensus 204 ~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~-----~G~~~~~~g~~~~~~~~~~~i~g~-~~~g~l~~r~g~~~ 277 (402)
T PRK11902 204 DFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRG-----AGFSAGEVGIVNKTLGLAATIVGA-LAGGTLMVRLGLYR 277 (402)
T ss_pred HHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHhHHH
Confidence 788999888777666665544333323333333332 78999999998876655 466666 58999999999998
Q ss_pred HHHHHHHHHHHHHh
Q 015396 356 VARIAGVLTIPLLT 369 (407)
Q Consensus 356 ~~~~~~~~~~~~~~ 369 (407)
.+..+..+..+..+
T Consensus 278 ~l~~~~~~~~l~~l 291 (402)
T PRK11902 278 SLMLFGVLQAVSNL 291 (402)
T ss_pred HHHHHHHHHHHHHH
Confidence 87766665554443
No 77
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.92 E-value=1.1e-22 Score=179.02 Aligned_cols=304 Identities=17% Similarity=0.176 Sum_probs=240.4
Q ss_pred chHHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHH
Q 015396 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (407)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~ 118 (407)
++..+..+....++.++......+.+|.+++.++++..+ .+++..+++.++.+.+++.|++.+|+|+|+.++.+
T Consensus 11 ~~~~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~------a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lg 84 (422)
T COG0738 11 VKLAFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFE------ASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLG 84 (422)
T ss_pred ceeHHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHH------HHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHH
Confidence 334556677778888888999999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhh---ccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhc
Q 015396 119 TASVVIFNTLFG---LSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (407)
Q Consensus 119 ~~~~~~~~~~~~---~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 194 (407)
+.++++++.++. ...++..++++-++.|.|.+...+. +.+++...|++.-.+.+++.+...++|.+++|++++.+.
T Consensus 85 L~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~li 164 (422)
T COG0738 85 LLLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLI 164 (422)
T ss_pred HHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 999999999884 5678899999999999999998885 999999999988889999999999999999999999998
Q ss_pred CCC----CCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhc--cccCCCCCCCCcchhhhhhhhhhhchhhhhhhh
Q 015396 195 QPA----EKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFW--LPETLHRHNDDDDSCDVSYDALESASAEVKEEE 268 (407)
Q Consensus 195 ~~~----~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (407)
.+. .+-.....|+... --.++.++...+...++..+.... .|+.+...+++.+
T Consensus 165 ls~~~~~~~~~~~~~~~~~~-~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~~~-------------------- 223 (422)
T COG0738 165 LSGVALTMSAAQILAIKGAD-ASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSLGA-------------------- 223 (422)
T ss_pred HhhhhhccCHHHHHHHHHHH-HHhhhhHHHHHHHHHHHHHHHHHhccCCcCCcccccccc--------------------
Confidence 621 0000111122211 122555666666554444433332 2322221111110
Q ss_pred cccccccccccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHH
Q 015396 269 GREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLE 348 (407)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~ 348 (407)
+......+++++|+++...+..+++...+....++++.|..+. .|.+..+.+...+..-.+.++|+ +++.++.
T Consensus 224 -~~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~-----~g~~~~~aa~~~s~~~~~~~vGR-Fig~~lm 296 (422)
T COG0738 224 -SGSAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEEL-----LGLNEQQAAYYLSFFWVGFMVGR-FIGSALM 296 (422)
T ss_pred -cccchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhc-----CCccHHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 0111567889999999999999999999999999999999886 78899999999999999999998 4888888
Q ss_pred HHhchhHHHHHHHHHHHHHHhhhhHHHh
Q 015396 349 RILGPIMVARIAGVLTIPLLTSYPYIAM 376 (407)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (407)
+|+...+.+....+...+.++...+.+.
T Consensus 297 ~~~~~~k~Laf~a~~~ill~~~~~l~~g 324 (422)
T COG0738 297 SRIKPEKYLAFYALIAILLLLAVALIGG 324 (422)
T ss_pred HHhCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 8999999988887777777666655554
No 78
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.92 E-value=6.2e-23 Score=217.13 Aligned_cols=336 Identities=18% Similarity=0.136 Sum_probs=221.3
Q ss_pred HHHHHHHHHHHHhhhhhh-chhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHH
Q 015396 41 TELFSIWIIVLCTALPIS-SLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (407)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (407)
+.+..+++..++..+... ....+.+.+..+++.+... ...+++.+++.++..++++++|+++||+|||++++++.
T Consensus 9 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~ 84 (1146)
T PRK08633 9 IGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQV----ILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVK 84 (1146)
T ss_pred hhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHH----HHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHH
Confidence 344445555555554443 3344445666666654332 23789999999999999999999999999999999888
Q ss_pred HHHHHHHHHhh---ccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 120 ASVVIFNTLFG---LSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 120 ~~~~~~~~~~~---~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
++.++..++.. .+++++.++++|++.|++.+...+. .+++.|++|+++|++++++...+..+|.++||++++++.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~ 164 (1146)
T PRK08633 85 LFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFE 164 (1146)
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 76665554433 4578999999999999999988886 9999999999999999999999999999999999999986
Q ss_pred CCC-CCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccccc
Q 015396 196 PAE-KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATP 274 (407)
Q Consensus 196 ~~~-~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (407)
... .....++ +.++..+++.....++.++..+.+||.++.....++..+.. ........
T Consensus 165 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~ 224 (1146)
T PRK08633 165 SVNGNTPSEIL-------GRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVFDKKKYL-------------FPKLLWRN 224 (1146)
T ss_pred hhccccccccc-------cchHHHHHHHHHHHHHHHHHHhcCcCCCCCCcccccccccc-------------cHHHHHHH
Confidence 200 0000011 11122222233333334444556677654432211000000 00001123
Q ss_pred cccccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchh-hHHHHHHHHHHHHHHHHHhHHHHHHHHhch
Q 015396 275 KKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQ-MVGEVLAITGFSLLVFQLSLYPFLERILGP 353 (407)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 353 (407)
++.+++++.++...+..++..........++|.|.... +|++.. +.+++.+..+++.+++.. +.+++.||+++
T Consensus 225 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~s~~~~~g~~~~~~~ig~~~g~~-~~g~l~~r~~~ 298 (1146)
T PRK08633 225 LKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEV-----LGLDNTFQVQYLLAASAIGIGIGSL-LAGRLSGRHIE 298 (1146)
T ss_pred HHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH-----hCCCcHHHHHHHHHHHHHHHHHHHH-HHHHHhCCceE
Confidence 45677888888777766666666666666777777655 788888 899999999999999885 88999999998
Q ss_pred hHHHHHHHHHHHHHHhhhhHHHhhhhhhhH-hhhhh-----hHHHHHHHhhcCCCCCCC
Q 015396 354 IMVARIAGVLTIPLLTSYPYIAMLSGFGLA-FLLNC-----ASVVKNLLSSSGPGSKRS 406 (407)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~p~~~rs 406 (407)
++.+.++.++.+++.+.+.+.......... +..+. .........+..|++.|+
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg 357 (1146)
T PRK08633 299 LGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELG 357 (1146)
T ss_pred ccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchh
Confidence 888877777776666655544322211111 11111 112345566777877765
No 79
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.91 E-value=1.2e-24 Score=189.91 Aligned_cols=289 Identities=17% Similarity=0.182 Sum_probs=221.8
Q ss_pred HHHHHHHHhhhhhhchhhhHHHHHHhhcc----------------------------------------------ccccc
Q 015396 45 SIWIIVLCTALPISSLFPFLYFMIKDFQI----------------------------------------------AKREE 78 (407)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------------------s~~~~ 78 (407)
.+....+.+++......|.+|.+..+.+- +...+
T Consensus 25 iv~ialllDnmL~~vivPiiP~~L~d~~~~p~~~~~~~~is~~~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~~~~e 104 (464)
T KOG3764|consen 25 IVSIALLLDNMLYTVIVPIIPGYLYDIQAEPTIIQPFFPISTAPIPPGSMSSFSSLNISTESTNASAGKSPAEAISLDRE 104 (464)
T ss_pred EEehhhhccCccceeeeccCccHHHHhccCCccCccccccccCCCCCccccceecccCCccccccccccCchhccCcccc
Confidence 45666777777788888888877665541 11111
Q ss_pred chhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HH
Q 015396 79 DIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KA 157 (407)
Q Consensus 79 ~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~ 157 (407)
..-+|++.+...+.+.+.+++.|.+.||+|+|..+++|.+.....++++++.++++.++++|.+||++.+...++ .+
T Consensus 105 --~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsgla 182 (464)
T KOG3764|consen 105 --NTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLA 182 (464)
T ss_pred --ccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHH
Confidence 122899999999999999999999999999999999999999999999999999999999999999999998887 99
Q ss_pred HHhhhcccc-chhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhcc
Q 015396 158 YACEIFREE-HQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWL 236 (407)
Q Consensus 158 ~~~~~~~~~-~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (407)
+++|.+|++ +|++++|+...+.++|..+||++||++.+ ..|...||++.+++.++...+.+++
T Consensus 183 mlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe----------------~~Gk~aPFlVL~~v~Lld~~L~l~v 246 (464)
T KOG3764|consen 183 MLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYE----------------FAGKSAPFLVLAIVLLLDGALQLLV 246 (464)
T ss_pred HHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHh----------------hcCCcCcHHHHHHHHHHHHHHHHhe
Confidence 999999965 57999999999999999999999999999 5667788899998888866665554
Q ss_pred ccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccccccccccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccC
Q 015396 237 PETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLG 316 (407)
Q Consensus 237 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (407)
-|..+..+... .+..+.++++++|+++.........+.........++.|..+.
T Consensus 247 i~p~~~~~~~~----------------------~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~---- 300 (464)
T KOG3764|consen 247 IEPTEMDPDST----------------------EQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLET---- 300 (464)
T ss_pred eCccccCcccc----------------------ccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHh----
Confidence 44322222111 1233678899999988776665555555445555556665554
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhc--hhHHHHHHHHHHHHHHhhhhHHHhhhh
Q 015396 317 GLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG--PIMVARIAGVLTIPLLTSYPYIAMLSG 379 (407)
Q Consensus 317 ~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (407)
+.-+.-+.|..+....+...++.. +.+.+.||++ |......+.+..++++...++.+....
T Consensus 301 -m~~p~w~~G~~fLp~~~~y~ig~~-lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~ 363 (464)
T KOG3764|consen 301 -MFTPGWEVGLAFLPASLSYAIGTN-LFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQ 363 (464)
T ss_pred -ccCCCcceeeeecccccchhccCc-hHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHH
Confidence 453444788888889999999985 8899999999 555555566666666666666665444
No 80
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.91 E-value=1.1e-22 Score=193.08 Aligned_cols=294 Identities=21% Similarity=0.240 Sum_probs=225.8
Q ss_pred chHHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHH
Q 015396 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (407)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~ 118 (407)
+.+.+..++.+.++..++..+.....+-+..+..-|+.. .+++..+..+...+.++++|.++||++|||+++.+
T Consensus 8 r~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~------valv~~a~~LP~~Llsl~aG~laDr~drrrili~~ 81 (524)
T PF05977_consen 8 RNRNFRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLM------VALVQAASTLPILLLSLFAGALADRFDRRRILILS 81 (524)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHH
Confidence 345667788899999999999999999888777777777 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhc-----cchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhh
Q 015396 119 TASVVIFNTLFGL-----SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGF 192 (407)
Q Consensus 119 ~~~~~~~~~~~~~-----~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 192 (407)
.++..+..+..++ ..+.|.+++.-++.|++.+...|+ .+++.|..|+++...++++.+...++...+||.++|.
T Consensus 82 ~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~ 161 (524)
T PF05977_consen 82 QLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGI 161 (524)
T ss_pred HHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHH
Confidence 8877665544333 247899999999999999999998 9999999999999999999999999999999999999
Q ss_pred hcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccc
Q 015396 193 LAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREA 272 (407)
Q Consensus 193 l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (407)
+.. ..+....+.+.++..++.+..+...+...+..+.+++ .. .++-.
T Consensus 162 Lva----------------~~G~~~~f~inalsfl~~i~~l~~~~~~~~~~~~~~e---~~--------------~~~l~ 208 (524)
T PF05977_consen 162 LVA----------------FFGAAAAFLINALSFLISILALLRWKPPPPPSSLPRE---RF--------------FSALR 208 (524)
T ss_pred HHH----------------HHHHHHHHHHHHHHHHHHHHHHHHccccccccccchh---hh--------------hhhHH
Confidence 987 3334444566666555544444444432221111110 00 00112
Q ss_pred cccccccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhc
Q 015396 273 TPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG 352 (407)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 352 (407)
...+.+.++|.++..+...++..+....+...+|.+..+. +|.++...|++.+..+++++++++ +.+++.++++
T Consensus 209 ~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~-----l~~~a~~yGll~a~~gvGai~Gal-~~~~l~~~~~ 282 (524)
T PF05977_consen 209 EGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDV-----LGGGASGYGLLLAAFGVGAILGAL-LLPRLRRRLS 282 (524)
T ss_pred HHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHH-----hCCcHHHHHHHHHHHHHHHHHHHH-HHHHhhcccC
Confidence 2445566677777666666666666566666778777665 788999999999999999999996 7888989999
Q ss_pred hhHHHHHHHHHHHHHHhhhhHHHhh
Q 015396 353 PIMVARIAGVLTIPLLTSYPYIAML 377 (407)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (407)
+++++..+.+..+++++.+.+....
T Consensus 283 ~~~lv~~~~~~~a~~~~~lal~~~~ 307 (524)
T PF05977_consen 283 SRRLVLLASLLFALALLLLALSPSF 307 (524)
T ss_pred cchhhHHHHHHHHHHHHHHhcchHH
Confidence 8888888888888777776665543
No 81
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.91 E-value=1.7e-22 Score=213.14 Aligned_cols=248 Identities=16% Similarity=0.134 Sum_probs=183.3
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcccccCChHHHHH---HHHHHHHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHH
Q 015396 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM---GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYA 159 (407)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~ 159 (407)
.++..+++.+.+.++++++|+++||+|||+++.. ..+...+..+.....+++++++++|+++|++.+...|+ .+++
T Consensus 54 ~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l 133 (1140)
T PRK06814 54 VTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSIL 133 (1140)
T ss_pred HHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhh
Confidence 7888899999999999999999999999997643 22222222333334589999999999999999998886 9999
Q ss_pred hhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhccccC
Q 015396 160 CEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPET 239 (407)
Q Consensus 160 ~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 239 (407)
.|++|+++|++++++.+++.++|.++||+++|++.+ ..+|+..+...++..++.++..+++|++
T Consensus 134 ~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (1140)
T PRK06814 134 PDHLNKDELLGANALVEAGTFIAILLGTIIGGLATI----------------SGNFVILVALLMGIAVLGWLASLFIPKT 197 (1140)
T ss_pred HhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHh----------------ccccHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 999999999999999999999999999999999998 3345544455555555555556667765
Q ss_pred CCCCCCCcchhhhhhhhhhhchhhhhhhhcccccccccccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccc
Q 015396 240 LHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLN 319 (407)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 319 (407)
++.....+...... ++....++.+.+++.++...+..++..+....+..++|.|+.+. +|
T Consensus 198 ~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-----~g 257 (1140)
T PRK06814 198 GNAAPDLKIDRNII---------------RSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKET-----LG 257 (1140)
T ss_pred CCCCCCCeeccchH---------------HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHH-----cC
Confidence 43222111100000 00112456678889999888888877777777777889888765 78
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHHHHH
Q 015396 320 YSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLL 368 (407)
Q Consensus 320 ~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 368 (407)
.++.+.|++.+..+++.+++.. +.+++.++..+++.+..+.++..+..
T Consensus 258 ~~~~~~g~~~~~~~~g~~ig~~-~~g~l~~~~~~~~~~~~~~~~~~~~~ 305 (1140)
T PRK06814 258 GDENVATLFLAVFSVGVAVGSF-LASKLSEGRITLLYVPIGALLMGLFG 305 (1140)
T ss_pred CchHHHHHHHHHHHHHHHHHHH-HHHHHhCCceeeeeehHHHHHHHHHH
Confidence 8999999999999999999985 77888877666555554444444333
No 82
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.90 E-value=6e-22 Score=185.43 Aligned_cols=290 Identities=13% Similarity=0.146 Sum_probs=195.1
Q ss_pred HHHHHHHHHHHhhhhhhchhhhHHHH-HHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHH
Q 015396 42 ELFSIWIIVLCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (407)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (407)
.++.+....++.+.....+.|.+|.+ .+++|.++.+ .|++.+++.++..+++++.|+++||+|||+.++.+..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~------~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~ 76 (396)
T TIGR00882 3 NFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTD------TGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIIS 76 (396)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 34556667778888888899999865 4578999999 9999999999999999999999999999999988766
Q ss_pred HHHHHHHHh---hcc-----chHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhh
Q 015396 121 SVVIFNTLF---GLS-----VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGG 191 (407)
Q Consensus 121 ~~~~~~~~~---~~~-----~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 191 (407)
..+++.... .+. +..+.+++.+++.|++.+...+. ..+..|.. +++++.++......++|.+++|.+++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g 154 (396)
T TIGR00882 77 GLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAG 154 (396)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHh
Confidence 665544322 111 12344566788888887776664 66666643 33455677888888999999999999
Q ss_pred hhcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhc-cccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcc
Q 015396 192 FLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFW-LPETLHRHNDDDDSCDVSYDALESASAEVKEEEGR 270 (407)
Q Consensus 192 ~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (407)
.+.+ ++|+.++++.++..++..+..+. .||+++++. ++ +.. + ++++++
T Consensus 155 ~l~~-----------------~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~----~------~~~~~~ 203 (396)
T TIGR00882 155 ILFS-----------------IDPQIVFWLGSGFALILMLLLMFAKPKAPSSAT-VA---NAL----G------ANASAF 203 (396)
T ss_pred hhhc-----------------cCchHHHHHHHHHHHHHHHHHHHhCCCCchhhh-hh---ccc----c------cccCCC
Confidence 8864 24555567777666655444433 333322110 00 000 0 000111
Q ss_pred cccccccccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 015396 271 EATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI 350 (407)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 350 (407)
+.++.++++|||+++...+..++...........++.|..+... +.+.+....|...+...+...++.. ..+++.||
T Consensus 204 ~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~--~~~~~~~~~g~~~~~~~i~~~~~~~-~~g~l~~r 280 (396)
T TIGR00882 204 SLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFA--TPQQGTRVFGYVTTMGELLNALIMF-CAPLIINR 280 (396)
T ss_pred CHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--ccccchHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 22345678889888766655555444444444456666554321 1355666788888888888888874 78899999
Q ss_pred hchhHHHHHHHHHHHHHHhhhhH
Q 015396 351 LGPIMVARIAGVLTIPLLTSYPY 373 (407)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~ 373 (407)
+++|+.+.++..+..+....+..
T Consensus 281 ~g~~~~l~~~~~l~~l~~~~~~~ 303 (396)
T TIGR00882 281 IGAKNALLIAGTIMSVRIIGSSF 303 (396)
T ss_pred hccchhHHHHHHHHHHHHHHHHh
Confidence 99999998888877776665443
No 83
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.90 E-value=7.7e-22 Score=186.12 Aligned_cols=293 Identities=13% Similarity=0.106 Sum_probs=183.2
Q ss_pred HHHHHHHHHHHhhhhhhchhhhHHHHH-HhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHH
Q 015396 42 ELFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (407)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (407)
..+.+....++..+..+...|.+|.+. +++|.+..+ .|++.+++.++..+++++.|+++||+|||++++++..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~------~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~ 84 (420)
T PRK09528 11 NYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTD------TGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIIS 84 (420)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHH
Confidence 445555667777777778889998555 559999999 9999999999999999999999999999999988766
Q ss_pred HHHHHHHHhh---ccc-----hHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhh
Q 015396 121 SVVIFNTLFG---LSV-----NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGG 191 (407)
Q Consensus 121 ~~~~~~~~~~---~~~-----~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 191 (407)
+.+++..... .++ .....++.+++.|.+.....+. ..+. +.. .+++++.++......++|..++|++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~g~~~g~~~~~~~~g~~i~~~~~g 162 (420)
T PRK09528 85 GLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYI-ERV-SRRSGFEYGRARMWGSLGWALCAFIAG 162 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHH-HHH-HhhccccchhhHHhhhHHHHHHHHHHH
Confidence 6554433211 111 1111222333333332222222 2222 222 345677888888999999999999999
Q ss_pred hhcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhccc
Q 015396 192 FLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGRE 271 (407)
Q Consensus 192 ~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (407)
.+.+ .+|+.++++.++..++..+..++.+++++++...+++++. ++++..
T Consensus 163 ~l~~-----------------~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ 212 (420)
T PRK09528 163 ILFN-----------------INPQINFWLGSGSALILLVLLFFAKPDAPSTAKVANALGA-------------NASAVS 212 (420)
T ss_pred HHHh-----------------cCchHhHHHHHHHHHHHHHHHhcccccccchhhhccchhc-------------cccccc
Confidence 9875 1344555776666655555544443322211100000000 000011
Q ss_pred ccccccccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHh
Q 015396 272 ATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL 351 (407)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 351 (407)
.+..++.+|+|.++...+...+...........+|.|..+.. .+.+.+..+.+.+.+...++..++.. ..+++.||+
T Consensus 213 ~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~-~~g~l~dr~ 289 (420)
T PRK09528 213 LKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFF--ATPEQGTRVFGYLNSFQVFLEALIMF-FAPFIINRI 289 (420)
T ss_pred HHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHH--hccCcchHHHHHHHHHHHHHHHHHHH-HHHHHHHHh
Confidence 123345677887766555444443333334445565554321 11356677889999988888888874 889999999
Q ss_pred chhHHHHHHHHHHHHHHhhhhHHH
Q 015396 352 GPIMVARIAGVLTIPLLTSYPYIA 375 (407)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~ 375 (407)
++|+.+..+..+..+...++.+.+
T Consensus 290 g~~~~~~~~~~l~~~~~~l~~~~~ 313 (420)
T PRK09528 290 GAKNALLLAGTIMAVRIIGSGFAT 313 (420)
T ss_pred CcchhhHHHHHHHHHHHHHHHhcc
Confidence 999998888887777766665543
No 84
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.89 E-value=2.7e-21 Score=181.60 Aligned_cols=282 Identities=12% Similarity=0.049 Sum_probs=191.9
Q ss_pred HHHHHHHHhhhhhhchhhhHH-HHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCC-hHHHHHHHHHH
Q 015396 45 SIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGR-KPVIIMGTASV 122 (407)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Gr-r~~~~~~~~~~ 122 (407)
.+....++.+....+..|.++ .+.+++|.+.++ .|++.+++.++..++++++|+++||+|| |+++.++.++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~------iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~ 79 (418)
T TIGR00889 6 KLKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAE------IGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAG 79 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 456667777888888877776 556779999999 9999999999999999999999999965 77888888888
Q ss_pred HHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHH----h----hhccccchhhhhHHHHHHHHHHHHHHHHhhhhh
Q 015396 123 VIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYA----C----EIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (407)
Q Consensus 123 ~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~----~----~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 193 (407)
.++..+..+.++++.+++.|++.|++.+...+. .++. . |......|.+..| .+|.+++|.+++.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l 153 (418)
T TIGR00889 80 ALLLFFAAQVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLL 153 (418)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHh
Confidence 888888888899999999999999976665543 3332 2 2233334555544 36888888888877
Q ss_pred cCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhccccc
Q 015396 194 AQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREAT 273 (407)
Q Consensus 194 ~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (407)
.. ...| .++++.++..++..+..+++||+++..++++. +. ++..+.
T Consensus 154 ~~----------------~~~~-~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~--~~---------------~~~~~~ 199 (418)
T TIGR00889 154 DI----------------ELSN-IQLYITAGSSALLGVFALTLPDIPVAKSTAKM--SI---------------KVMLGL 199 (418)
T ss_pred cc----------------cchh-HHHHHHHHHHHHHHHHHhcCCCCCCCcccccc--CH---------------HHHhhh
Confidence 33 1112 23455555555555555677876432211100 00 000111
Q ss_pred ccccccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCc--cccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHh
Q 015396 274 PKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGG--LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL 351 (407)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 351 (407)
..++++|+|.++...+..++..........+.+.|..+...... .+++....+...+...+..+++.. ..+++.||+
T Consensus 200 ~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~-~~g~l~dr~ 278 (418)
T TIGR00889 200 DAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFIL-TIPFFLKRF 278 (418)
T ss_pred hHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHH-HHHHHHHHh
Confidence 23457788888777666666555444444555656543100000 123456779999999999999985 888999999
Q ss_pred chhHHHHHHHHHHHHHHhhhhH
Q 015396 352 GPIMVARIAGVLTIPLLTSYPY 373 (407)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~ 373 (407)
|+|+.+..+.++..+....+..
T Consensus 279 g~r~~l~~~~~~~~v~~~l~~~ 300 (418)
T TIGR00889 279 GIKKVMLLSLVAWALRFGFFAY 300 (418)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998888777655544
No 85
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.89 E-value=6e-21 Score=181.73 Aligned_cols=173 Identities=14% Similarity=0.201 Sum_probs=146.0
Q ss_pred HHHHHHHHHHHHhhhhhhchhhhHHHHHH-h--hcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccc-cCChHHHH
Q 015396 41 TELFSIWIIVLCTALPISSLFPFLYFMIK-D--FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVII 116 (407)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr-~Grr~~~~ 116 (407)
+.++.++...+...+..+...+.+|.+.+ + +|.+..+ .+++.+.+.++..+++++.|+++|| +|||+++.
T Consensus 10 ~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~------ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~ 83 (475)
T TIGR00924 10 KPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQ------AFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMV 83 (475)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHH------HHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHH
Confidence 44566777888888888888899987754 4 8999998 9999999999999999999999999 89999999
Q ss_pred HHHHHHHHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccc---hhhhhHHHHHHHHHHHHHHHHhhhh
Q 015396 117 MGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEH---QALGLSTVSTAWGIGLIIGPALGGF 192 (407)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~---r~~~~~~~~~~~~~g~~~~~~~~~~ 192 (407)
++.++.+++.++.+++++++.++++|++.|++.|...+. .++++|++|+++ |++++++.+.+.++|.++||.++++
T Consensus 84 ~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~ 163 (475)
T TIGR00924 84 LGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGV 163 (475)
T ss_pred HHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999989999999999999999887775 899999998764 8889999999999999999999999
Q ss_pred hcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhc
Q 015396 193 LAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFW 235 (407)
Q Consensus 193 l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (407)
+.+ ..+|+..+.+.++..++..+..++
T Consensus 164 l~~----------------~~g~~~~f~~~~~~~~~~~l~~~~ 190 (475)
T TIGR00924 164 IAE----------------NYGYHVGFNLAAVGMVIGLLTFFA 190 (475)
T ss_pred HHH----------------hcChHHHHHHHHHHHHHHHHHHHH
Confidence 987 344555556666544444433333
No 86
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.88 E-value=2.2e-20 Score=176.96 Aligned_cols=294 Identities=14% Similarity=0.148 Sum_probs=193.7
Q ss_pred HHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHH
Q 015396 49 IVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTL 128 (407)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~ 128 (407)
.....++........++.+..++|-++. ..|+.+...++..++.++.|+++|.||||..++.+.++..++.++
T Consensus 52 ~~~~~~~~~~~~a~~l~~I~~diG~~~~-------~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv 124 (599)
T PF06609_consen 52 AVIAAYFVLVLPASILPYINADIGGSDN-------WSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIV 124 (599)
T ss_pred HHHHHHHHHhccHHHHHHHHHhcCCCcc-------chHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHH
Confidence 3334455666667778899999998754 689999999999999999999999999999999999999999999
Q ss_pred hhccchHHHHHHHHHHHhhhccchhHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcccccc
Q 015396 129 FGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSES 208 (407)
Q Consensus 129 ~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~ 208 (407)
++.++|...++++..+.|++.|........++|..|.|.|+...++......+....+|.++..+.. .-+|||
T Consensus 125 ~atA~~~~~~iag~~l~GvgaG~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~-------~~~WRw 197 (599)
T PF06609_consen 125 CATAQNMNTFIAGMVLYGVGAGVQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAA-------HSGWRW 197 (599)
T ss_pred hhcCCcHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhcc-------CCCcch
Confidence 9999999999999999999987776667779999999999888777766666666677777777655 334555
Q ss_pred cccCCCChhHHHHHHHHHHHHHHHH--hccccCCCCCCCCcchhhhhhhhhhh---------------------c-hhhh
Q 015396 209 LFGKFPYFLPCLCISLFAFGVTIAA--FWLPETLHRHNDDDDSCDVSYDALES---------------------A-SAEV 264 (407)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~e~~~~~~~~~~~~~~~~~~~~~---------------------~-~~~~ 264 (407)
.| ++.++...+.++.. +..|++.+..+.++...++...++|- . ....
T Consensus 198 ~~---------~~~~i~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W 268 (599)
T PF06609_consen 198 IF---------YIFIIWSGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPW 268 (599)
T ss_pred HH---------HHHHHHHHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCC
Confidence 44 55555544433332 22332221111111111111112211 0 0000
Q ss_pred ---------------------hhhh--cccccccccccccc-hhHHHHHHHHHHhhccchhhhHHhhhccCCCccCcccc
Q 015396 265 ---------------------KEEE--GREATPKKSLLKNW-PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNY 320 (407)
Q Consensus 265 ---------------------~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 320 (407)
.|.. .+++.-..+++|++ .+...+++.++.....+....++|...... ++-
T Consensus 269 ~Sa~VIa~lviG~~~Lv~F~~wE~~~~~~~Pl~P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~v-----f~~ 343 (599)
T PF06609_consen 269 KSAHVIAPLVIGFVLLVAFVVWEWFGAPKDPLFPHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNV-----FGS 343 (599)
T ss_pred CCccchhhHHHHHHHHHHHHHhhhhccCCCCcCCHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----ccC
Confidence 1221 23455667888874 455555666666555566666777665544 222
Q ss_pred ch---hhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHH-HHHHHHHHHHHHhhh
Q 015396 321 ST---QMVGEVLAITGFSLLVFQLSLYPFLERILGPIMV-ARIAGVLTIPLLTSY 371 (407)
Q Consensus 321 s~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~ 371 (407)
+. ...++.....+++...+.. +.+.+.++.++.|. ++++..++.+++.++
T Consensus 344 d~~~~~~~~~~s~~~~fg~~~g~~-i~g~l~~~ir~~Kw~li~~~~~~ta~~Gam 397 (599)
T PF06609_consen 344 DPISITEIGWISSPVGFGSCAGAV-ILGLLFSKIRHIKWQLIFGSVLMTAFCGAM 397 (599)
T ss_pred CCcccceeehhhhhHHHHHHHHHH-HHHHHHHHccchhHHHHHHHHHHHHHHHHH
Confidence 22 3467777777888777775 56667776665444 456655555444444
No 87
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.88 E-value=8.7e-21 Score=179.42 Aligned_cols=314 Identities=17% Similarity=0.173 Sum_probs=229.2
Q ss_pred CCCCchHHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHH
Q 015396 35 KSGLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPV 114 (407)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~ 114 (407)
+..+.|-..+..++..+...-....+..+.+.++++++.+.++ ++|+.++......+..|+.+.+.||+|.|.+
T Consensus 40 dGG~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~------~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v 113 (509)
T KOG2504|consen 40 DGGWGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQ------IAWIGSLLLGVYLLAGPLVSALCNRFGCRTV 113 (509)
T ss_pred CCCeeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccH------HHHHHHHHHHHHHHhccHHHHHHhhcCchHH
Confidence 3445555555555666666666666778889999999999999 9999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccchHHHHHHHH-HHHhhhccchhH-HHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhh
Q 015396 115 IIMGTASVVIFNTLFGLSVNFWMAVLTR-FLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGF 192 (407)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r-~l~G~~~g~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 192 (407)
.+.+.++..++.++.++++++|++++.. ++.|+|.|+... ...++..+|+ ++|+.+.|+...+.++|.++-|.+..+
T Consensus 114 ~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~-kkR~lA~Gia~~GsG~G~~~~~~l~~~ 192 (509)
T KOG2504|consen 114 MIAGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFE-KKRALATGIAVSGTGVGTVVFPPLLKY 192 (509)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhH-HHHHHHHhhhhccCCcceeeHHHHHHH
Confidence 9999999999999999999999999887 888999888544 5777776665 789999999999999999999999999
Q ss_pred hcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhcccc-CCCCCCC--------------Cc--------ch
Q 015396 193 LAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPE-TLHRHND--------------DD--------DS 249 (407)
Q Consensus 193 l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e-~~~~~~~--------------~~--------~~ 249 (407)
+.+ +++||...++.+.+.+-..+....+++ +++..+. .+ .+
T Consensus 193 l~~----------------~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (509)
T KOG2504|consen 193 LLS----------------KYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISER 256 (509)
T ss_pred HHH----------------HhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhccccccccccccccccccccC
Confidence 998 556666667777666555444333332 2221111 00 00
Q ss_pred hhhhhh----hhhhchhhhhhhh--ccccc---ccccccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCcccc
Q 015396 250 CDVSYD----ALESASAEVKEEE--GREAT---PKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNY 320 (407)
Q Consensus 250 ~~~~~~----~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 320 (407)
.+.... ..+..++..++.+ ..+.. ...++++++.++...+...+..........+++.|..+ .|+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~------~g~ 330 (509)
T KOG2504|consen 257 DSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKS------LGL 330 (509)
T ss_pred CCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh------cCC
Confidence 000000 0000000000000 11111 13688999999999888888888888888888888775 899
Q ss_pred chhhHHHHHHHHHHHHHHHHHhHHHHHHHHhc--hhHHHHHHHHHHHHHHhhhhHHHhhh
Q 015396 321 STQMVGEVLAITGFSLLVFQLSLYPFLERILG--PIMVARIAGVLTIPLLTSYPYIAMLS 378 (407)
Q Consensus 321 s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (407)
+..+++++.++.++...++++ +.+++.|+.. ++.+..++.+..+++.+..++.....
T Consensus 331 ~~~~aa~l~Siigi~~i~gRi-~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~ 389 (509)
T KOG2504|consen 331 SSNDAAFLLSIIGVSDIIGRI-ILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYV 389 (509)
T ss_pred ChhhhHHHHHHHHHhhhhhhh-hhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 999999999999999999995 8899999877 44455566666666665555555443
No 88
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.88 E-value=4.1e-20 Score=176.11 Aligned_cols=150 Identities=17% Similarity=0.175 Sum_probs=130.5
Q ss_pred hHHHHHHHHHHHHhhhhhhchhhhHH-HHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccc-cCChHHHHH
Q 015396 40 ITELFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVIIM 117 (407)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr-~Grr~~~~~ 117 (407)
++.++.++...+...+..+...+.++ ++.+++|.+.++ .+++.+.+.....+..++.|+++|| +||||+++.
T Consensus 13 p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~------a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~ 86 (489)
T PRK10207 13 PRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQ------AFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVL 86 (489)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHH
Confidence 36677777777888888887777776 556789999988 8999999998888889999999999 999999999
Q ss_pred HHHHHHHHHHHhhccchHHH-HHHHHHHHhhhccchhHH-HHHHhhhcccc--chhhhhHHHHHHHHHHHHHHHHhhhhh
Q 015396 118 GTASVVIFNTLFGLSVNFWM-AVLTRFLLGSLNGLLGPI-KAYACEIFREE--HQALGLSTVSTAWGIGLIIGPALGGFL 193 (407)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~-l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~~~~~~~~~l 193 (407)
+.+++.++.++++++.+... ++++|+++|++.|...+. .+++.|.+|++ +|++++++++.+.++|..+||.+++++
T Consensus 87 g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l 166 (489)
T PRK10207 87 GAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVI 166 (489)
T ss_pred HHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998876444 558899999999988775 99999999877 457789999999999999999999999
Q ss_pred cC
Q 015396 194 AQ 195 (407)
Q Consensus 194 ~~ 195 (407)
.+
T Consensus 167 ~~ 168 (489)
T PRK10207 167 AD 168 (489)
T ss_pred HH
Confidence 98
No 89
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.88 E-value=9.4e-26 Score=214.92 Aligned_cols=342 Identities=18% Similarity=0.236 Sum_probs=214.3
Q ss_pred HHHHHhhhhhhchhhhHHHHH--Hhhcccccccc---hhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHH
Q 015396 48 IIVLCTALPISSLFPFLYFMI--KDFQIAKREED---IGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (407)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~--~~~~~s~~~~~---~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~ 122 (407)
++.+..+++........+... ..++.+..+.+ .....++..+...+|..+|++++|+++||+|||+.++++.++.
T Consensus 7 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~ 86 (451)
T PF00083_consen 7 LGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLM 86 (451)
T ss_pred HHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhccccccccccccccccccccccccccc
Confidence 344666666666655555443 33333332211 2344789999999999999999999999999999999999999
Q ss_pred HHHHHHhhccc---hHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCC
Q 015396 123 VIFNTLFGLSV---NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (407)
Q Consensus 123 ~~~~~~~~~~~---~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 198 (407)
.++.++.++++ +++.+.++|++.|++.|...+. ..++.|..|+++|++..++.+....+|..++..++..+...
T Consensus 87 ~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~-- 164 (451)
T PF00083_consen 87 IIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYY-- 164 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--
Confidence 99999999999 9999999999999998887775 99999999999999999999999999999888877655331
Q ss_pred CCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhccccCCCCCCCCcchhhhhh--hhhhhc---hhhhhhhhc----
Q 015396 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSY--DALESA---SAEVKEEEG---- 269 (407)
Q Consensus 199 ~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~~~---- 269 (407)
.+ .+.||..+.+.+++.++.++...++||+|++...+++.+++.+ ++.... +++.++..+
T Consensus 165 -----~~------~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~ 233 (451)
T PF00083_consen 165 -----SD------NWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKE 233 (451)
T ss_pred -----cc------cccccccccccccccccccccccccccccceeccccccccccccccccccccccccccccccccccc
Confidence 11 2345655577777777777777889999998755544333321 111101 011111110
Q ss_pred --ccccccccccccchhH-HHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHH
Q 015396 270 --REATPKKSLLKNWPLM-SSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPF 346 (407)
Q Consensus 270 --~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (407)
+.+..++++++++..+ .......+..............|. +...+..+.+.. -......++...++. +.+.+
T Consensus 234 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~--~~i~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~ 308 (451)
T PF00083_consen 234 SQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYS--PSIFENAGISNS--FLATLILGLVNFLGT-LLAIF 308 (451)
T ss_pred ccccceeeeeccccccccccccccccccccccccccccccccc--cccccccccccc--ccccccccccccccc-ccccc
Confidence 1113467777775522 222222222222122211111221 222222555555 112223334444444 35568
Q ss_pred HHHHhchhHHHHHHHHHHHHHHhhhh--H--HHhhh---hhhh--H-------hhhhhhHHHHHHHhhcCCCCCCCC
Q 015396 347 LERILGPIMVARIAGVLTIPLLTSYP--Y--IAMLS---GFGL--A-------FLLNCASVVKNLLSSSGPGSKRSC 407 (407)
Q Consensus 347 l~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~---~~~~--~-------~~~~~~~~~~~~~~~~~p~~~rs~ 407 (407)
+.||+|||+.+..+.....++...+. . ..... .... . ...+.........+|++|++.|+.
T Consensus 309 ~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~ 385 (451)
T PF00083_consen 309 LIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRST 385 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccceeeeecccccccccccccccccccccccccccc
Confidence 89999999999988888777666553 1 11110 1111 0 111122334456799999999973
No 90
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.88 E-value=6e-21 Score=184.92 Aligned_cols=303 Identities=17% Similarity=0.131 Sum_probs=202.7
Q ss_pred HHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHhh
Q 015396 68 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGS 147 (407)
Q Consensus 68 ~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 147 (407)
.+.++.+... ..+..+++++|..+|++++|+++||+|||++++.+.++..++.++.++++|++.+++.|++.|+
T Consensus 110 ~~~~c~~~~~------~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~ 183 (521)
T KOG0255|consen 110 WNLVCDSSTL------VALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGF 183 (521)
T ss_pred hceeeCcHhH------HHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHh
Confidence 3455666666 8899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhH-HHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcccccccccCCCChhHHHHHHHHH
Q 015396 148 LNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFA 226 (407)
Q Consensus 148 ~~g~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~ 226 (407)
+.+.... ...+++|++++++|+.+..+ ......++.++|..++++.. +||+.+++..+..
T Consensus 184 ~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~------------------~Wr~~~~~~~~~~ 244 (521)
T KOG0255|consen 184 FGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR------------------DWRWLFWIISIPS 244 (521)
T ss_pred hccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh------------------hHHHHHHHHHHHH
Confidence 8777555 59999999999999999999 77777778888888888764 3555558888877
Q ss_pred HHHHHHHhccccCCCCCCCCcchhhhhh--hhhhh------ch-h----h-h-hhh---hcccccccccccccchhHHHH
Q 015396 227 FGVTIAAFWLPETLHRHNDDDDSCDVSY--DALES------AS-A----E-V-KEE---EGREATPKKSLLKNWPLMSSI 288 (407)
Q Consensus 227 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~--~~~~~------~~-~----~-~-~~~---~~~~~~~~~~~~~~~~~~~~~ 288 (407)
++.++..+..||++++...+.+.++..+ ++..+ .. + . . ++. ..+.+....++++.|+++...
T Consensus 245 ~~~~~~~~l~~Es~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~ 324 (521)
T KOG0255|consen 245 GLFLLLWFLPPESPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRT 324 (521)
T ss_pred HHHHHHHHccCcChHHHHHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHH
Confidence 7776666667799998755444332221 11100 00 0 0 0 000 011224467788887665554
Q ss_pred HHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHHHHH
Q 015396 289 IVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLL 368 (407)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 368 (407)
+...+..+.......-+ .....++|.+. .......+....... ...+...++.|||.....+..+..+++
T Consensus 325 ~~~~~~~~~~~~~y~gl------~~~~~~lg~~~---~~~~~~~~~~~~p~~-~~~~~~~~~~gR~~~~~~~~~~~~~~~ 394 (521)
T KOG0255|consen 325 LYLLFIWFVFSLVYYGL------SLNVSGLGGNI---YLNFTLSGLVELPAY-FRNGLLLPEFGRRPPLFLSLFLAGIGL 394 (521)
T ss_pred HHHHHHHHHHhHHHHhh------hhhhhhcCchH---HHHHHHHHHHHhhHH-HHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 44444332211111111 11111133333 333333444555554 466788899999999999999999999
Q ss_pred hhhhHHHhhhh---hhhHhhhh------hhHHHHHHHhhcCCCCCC
Q 015396 369 TSYPYIAMLSG---FGLAFLLN------CASVVKNLLSSSGPGSKR 405 (407)
Q Consensus 369 ~~~~~~~~~~~---~~~~~~~~------~~~~~~~~~~~~~p~~~r 405 (407)
+...+...... .+....++ .........+|.+|+..|
T Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r 440 (521)
T KOG0255|consen 395 LLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVR 440 (521)
T ss_pred HHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHH
Confidence 88877664333 11111111 111234556778887655
No 91
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.87 E-value=2e-20 Score=161.84 Aligned_cols=191 Identities=20% Similarity=0.167 Sum_probs=158.3
Q ss_pred CchHHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHH
Q 015396 38 LPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (407)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~ 117 (407)
.++..........+.+.+......-+.|...+..|.+..+ ..++....+.+..+++..+|..+|++|||+.+.+
T Consensus 75 fq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q------~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~ 148 (528)
T KOG0253|consen 75 FQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQ------APLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNL 148 (528)
T ss_pred chhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhh------hhHHHHHHHhhhhhhhhhhheehhhhhcchhhhh
Confidence 3444455555566666666666666777888889988888 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccchHHHHHHHHHHHhhhccchhHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCC
Q 015396 118 GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (407)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 197 (407)
.....++..++.+.++|+..+.+.|.+.|+|.|......++-.|..|..+|...+-.. ..+.+|.++...++-.+..
T Consensus 149 T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~-- 225 (528)
T KOG0253|consen 149 TFLVTGVFGVISGASPNFASLCVFRALWGFGVGGLPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMS-- 225 (528)
T ss_pred hHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCCccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHH--
Confidence 9999999999999999999999999999999888444588889999999999877666 8999999999999988887
Q ss_pred CCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhccccCCCCCCCCcchhh
Q 015396 198 EKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCD 251 (407)
Q Consensus 198 ~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 251 (407)
.+|||+.+ ....++..+.....+++||+|+....+.++.+
T Consensus 226 -----~~gwr~~l---------~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~k 265 (528)
T KOG0253|consen 226 -----NFGWRYLL---------FTSSTPLMFAARFLVWVYESPRFYLAKGDDYK 265 (528)
T ss_pred -----hhhHHHHH---------HHHHhHHHHHHHHHhhcccCcchhhhcCChHH
Confidence 56666655 66677777777788899999998655544433
No 92
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.87 E-value=3.8e-20 Score=168.69 Aligned_cols=175 Identities=13% Similarity=0.104 Sum_probs=144.7
Q ss_pred HHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHH
Q 015396 46 IWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIF 125 (407)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~ 125 (407)
+|+..|+..+ +.......|++.+++|+++++. .|.+.++++.+++++.++.|+++||+|.|+++.++.+.+++.
T Consensus 32 lC~fGF~~e~-R~n~s~a~p~L~~elglT~~qv-----~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~ 105 (511)
T TIGR00806 32 LCFYGFMAQF-RPGESFITPYLLTVLNFTEETV-----TNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCV 105 (511)
T ss_pred HHHHHHHHHh-hchHHHHHHHHHHHcCCCHHHh-----cchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHH
Confidence 4444444333 4555667789999999998762 689999999999999999999999999999999999999999
Q ss_pred HHHhhccchHHHHHHHHHHHhhhccchhHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCccc
Q 015396 126 NTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFS 205 (407)
Q Consensus 126 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~g 205 (407)
.++.+++++++.+.+.|++.|++.|...+...++..|+|+++|+++.++...+..+|.++++++++++ . .+|
T Consensus 106 t~L~~fa~Sl~~L~i~R~llGvaEA~~~A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll-~-------s~g 177 (511)
T TIGR00806 106 WLLLLLGTSVWHMQLMEVFYSVTMAARIAYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLL-V-------TLG 177 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-------hcC
Confidence 99999999999999999999999998775599999999999999999999999999999999999994 3 467
Q ss_pred ccccccCCCChhHHHHHHHHHHHHHHHHhccccCC
Q 015396 206 SESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETL 240 (407)
Q Consensus 206 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 240 (407)
||+.. ...++....-.+.++..+++|..+
T Consensus 178 Wr~y~------~Ln~Isl~s~~~a~~~a~~LP~~~ 206 (511)
T TIGR00806 178 WISYS------TLNIISLVFMTFSVFLALFLKRPK 206 (511)
T ss_pred chhHH------HHHHHHHHHHHHHHHHHHhCCCCc
Confidence 77643 222333344444556667778443
No 93
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.87 E-value=2.2e-19 Score=155.94 Aligned_cols=268 Identities=17% Similarity=0.119 Sum_probs=219.3
Q ss_pred hhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhccch
Q 015396 55 LPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVN 134 (407)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~ 134 (407)
-....+.|.++.+.+++|+|.+. .|+++++..+...+.+++..+++.|+|.+|.+.+++++..++.++-... +
T Consensus 26 ~~itsvgPLL~~Ir~~~gls~s~------aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~ 98 (395)
T COG2807 26 PAITSVGPLLDEIRQDLGLSFSV------AGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-G 98 (395)
T ss_pred hhhhhhhhhHHHHHHHhcccHHH------HHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-c
Confidence 36678899999999999999999 9999999999999999999999999999999999999999999998887 7
Q ss_pred HHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcccccccccCC
Q 015396 135 FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKF 213 (407)
Q Consensus 135 ~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~~~~~~ 213 (407)
.+.++.+-.+.|.+.+...+. +.++.+.|| |+-+..++++.+..++|.++++.+.-.+.++ . .
T Consensus 99 ~~~L~~gt~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~-------~--------~ 162 (395)
T COG2807 99 LPLLFLGTLLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQH-------S--------G 162 (395)
T ss_pred HHHHHHHHHHHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHh-------h--------c
Confidence 888899999999999998886 999999998 5678899999999999999999999998872 2 1
Q ss_pred CChhHHHHHHHHHHHHHHHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccccccccccccchhHHHHHHHHH
Q 015396 214 PYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCV 293 (407)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (407)
+|+....+-+.++++.++.+ +|...+....+. +....+...++|+|.-|...+.+.+
T Consensus 163 gW~~aL~~WAl~allAl~~W--lPq~~r~~~~~~---------------------~~~~~~~~~vw~~~~aW~vtLfmGl 219 (395)
T COG2807 163 GWRGALGFWALLALLALLIW--LPQALREQAASI---------------------ATKLVSVRKVWRSPLAWQVTLFMGL 219 (395)
T ss_pred cHHHHHHHHHHHHHHHHHHH--hhhccccccccc---------------------ccccccccccccCchhHHHHHHHHh
Confidence 35555466666666666554 454322211110 0112244678999999999999999
Q ss_pred HhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHh-chhHHHHHHHHHHHHHHhhhh
Q 015396 294 FSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL-GPIMVARIAGVLTIPLLTSYP 372 (407)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~ 372 (407)
.++..+....++|.++.+ .|+|+++.|.+.+...+..+..++ ..+.+.+|. ++|+.......++.++...+.
T Consensus 220 qS~~~Y~~~~WLP~ili~------~G~sa~~aG~llsl~~l~~~~~~l-l~P~la~R~~n~r~~~~~~~~~~l~G~~G~~ 292 (395)
T COG2807 220 QSLLYYIVIGWLPAILID------RGLSAAEAGSLLSLMQLAQLPTAL-LIPLLARRSKNQRPLVVLALLLMLVGLVGLL 292 (395)
T ss_pred hHHHHHHHHHHHHHHHHH------cCCCHHHhhhHHHHHHHHHHHHHH-HHHHHHHHhcccchHHHHHHHHHHHHHHHHH
Confidence 999999999999999988 799999999999999999999995 888888864 456666666666666666554
Q ss_pred HHH
Q 015396 373 YIA 375 (407)
Q Consensus 373 ~~~ 375 (407)
+.+
T Consensus 293 ~~P 295 (395)
T COG2807 293 LAP 295 (395)
T ss_pred Hhh
Confidence 443
No 94
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.86 E-value=3.1e-19 Score=166.74 Aligned_cols=274 Identities=13% Similarity=0.055 Sum_probs=192.8
Q ss_pred HHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHH--HHHHHHHHHHhhhhhhh-cccccCChHHHHHHH
Q 015396 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYV--GSSFMFGRALTSVFWGL-VADRYGRKPVIIMGT 119 (407)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~--~~~~~~~~~~~~~~~G~-l~dr~Grr~~~~~~~ 119 (407)
+..+...++.+++..+...|.+|.+.++.|.+.++ +|++ .+...+...+.+|+.+. ..||+||||..++..
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~------iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~ 76 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTA------LAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPM 76 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHH
Confidence 44567778889999999999999999999999999 9997 46678888888888844 799999999875554
Q ss_pred HH-HHHHHHHhh---ccch-HHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhh
Q 015396 120 AS-VVIFNTLFG---LSVN-FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (407)
Q Consensus 120 ~~-~~~~~~~~~---~~~~-~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 193 (407)
.+ ..+.....+ ...+ ..+++...++.++..+...+. .++..|..++++++...+....+..+|..+|+...+++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l 156 (390)
T TIGR02718 77 QCLVSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVL 156 (390)
T ss_pred HHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33 222222222 2222 333444445555555566664 77888888888888888888888899999999999899
Q ss_pred cCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhccccc
Q 015396 194 AQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREAT 273 (407)
Q Consensus 194 ~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (407)
.+ +.+|+.++++.++..++..+..++++|++++++++++ + ...
T Consensus 157 ~~----------------~~gw~~~f~~~a~l~~~~~~~~~~~~~~~~~~~~~~~--~-------------------~~~ 199 (390)
T TIGR02718 157 FG----------------KFGQRPAFLLVACVPLASLVCVLWLKDRAVASPEAPL--A-------------------RRA 199 (390)
T ss_pred HH----------------HhCHHHHHHHHHHHHHHHHHHHHHcCCCCcCccccch--h-------------------hHH
Confidence 88 4455666688777766655554455443221111000 0 011
Q ss_pred ccccccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhch
Q 015396 274 PKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP 353 (407)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 353 (407)
+.++.+|+|.++......++..........+.+.|+.+ .|++++++|.+....++...+.+.++.+++.||+++
T Consensus 200 ~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~------~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~ 273 (390)
T TIGR02718 200 SLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVD------AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGL 273 (390)
T ss_pred HHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh------cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhH
Confidence 34577888888877777777777666777777777665 699999999998888765544433589999999999
Q ss_pred hHHHHHHHHHHH
Q 015396 354 IMVARIAGVLTI 365 (407)
Q Consensus 354 ~~~~~~~~~~~~ 365 (407)
++.+..+..+.+
T Consensus 274 ~~~l~~~~~~~~ 285 (390)
T TIGR02718 274 WRTFILGVGLAG 285 (390)
T ss_pred HHHHHHHHHHHH
Confidence 999887766553
No 95
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.86 E-value=4.3e-20 Score=175.30 Aligned_cols=281 Identities=15% Similarity=0.121 Sum_probs=192.2
Q ss_pred hhhhhhchhhhHH-HHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccc----cCChH-HHHHHHHHHHHHH
Q 015396 53 TALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR----YGRKP-VIIMGTASVVIFN 126 (407)
Q Consensus 53 ~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr----~Grr~-~~~~~~~~~~~~~ 126 (407)
.......+.+.++ .+.+++|+++.+ +|++.++..+..++..|+.|+++|| +|||| .++.+.+..+++.
T Consensus 11 ~~~~~~~~~~~l~~~~~~~~g~s~~~------~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~ 84 (437)
T TIGR00792 11 NNFIFAIVSTYLLFFYTDVLGLSAAF------VGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVL 84 (437)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCHHH------HHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHH
Confidence 3344455555554 667789999999 9999999999999999999999997 67744 5677878888777
Q ss_pred HHhhccch------HHHHHHHHHHHhhhccchhH-HHHHHhhhc-cccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCC
Q 015396 127 TLFGLSVN------FWMAVLTRFLLGSLNGLLGP-IKAYACEIF-REEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (407)
Q Consensus 127 ~~~~~~~~------~~~l~~~r~l~G~~~g~~~~-~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 198 (407)
+++...++ .+.+++.+++.+++.+...+ ..++..|.. ++++|++..++.+.+..+|..+++.+.+.+....+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~ 164 (437)
T TIGR00792 85 VLLFTTPDFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFG 164 (437)
T ss_pred HHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 77665543 45677778888887776555 488888887 57899999999999999998888777666654111
Q ss_pred CCCCcccccccccCCCChhHHHHHHHHHHHHHH-HHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhccccccccc
Q 015396 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKS 277 (407)
Q Consensus 199 ~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (407)
+.. ...+|+..+.+.+++.++..+ ..+..||+++..+.++++ +.+.....+.
T Consensus 165 ~~~---------~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~~~~------------------~~~~~~~~~~ 217 (437)
T TIGR00792 165 GGD---------DKFGWFMFALVLALIGVVSLIICFFGTKERYSEIPKNIEK------------------KLSLKQIFKA 217 (437)
T ss_pred CCc---------ccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCccccc------------------CCCHHHHHHH
Confidence 000 034566666777776665443 345667654221110000 0001123466
Q ss_pred ccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHH
Q 015396 278 LLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVA 357 (407)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 357 (407)
++++|.++...+..++..........+.+.|.... ++ +....+.+.....++.+++. ++.+++.||+|+|+.+
T Consensus 218 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~i~~ii~~-~~~~~l~~r~g~~~~~ 290 (437)
T TIGR00792 218 LFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYV-----LG-DPELFSYMGSIAIVAGLIGV-LLFPRLVKKFGRKILF 290 (437)
T ss_pred HhCCHHHHHHHHHHHHHHHHHHHHcchhheeEeee-----cC-ChHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCcHHHH
Confidence 78899988877777776665555544445444332 34 45566777777778888887 4889999999999999
Q ss_pred HHHHHHHHHHHhhhhH
Q 015396 358 RIAGVLTIPLLTSYPY 373 (407)
Q Consensus 358 ~~~~~~~~~~~~~~~~ 373 (407)
..+..+..++.+.+.+
T Consensus 291 ~~~~~~~~~~~~~~~~ 306 (437)
T TIGR00792 291 AGGILLMVLGYLIFFF 306 (437)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8888777776665544
No 96
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.84 E-value=1.3e-21 Score=174.00 Aligned_cols=361 Identities=14% Similarity=0.098 Sum_probs=216.5
Q ss_pred CCchHHHH---HHHHHHHHhhhhhhchhhhHHHHHHhh-cccccccc-hhhHHHHHHHHHHHHHHHhhhhhhhcccccCC
Q 015396 37 GLPITELF---SIWIIVLCTALPISSLFPFLYFMIKDF-QIAKREED-IGSYAGYVGSSFMFGRALTSVFWGLVADRYGR 111 (407)
Q Consensus 37 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~~-~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Gr 111 (407)
...|+++. ...++.+.+.++...++...|.+...+ |.+....+ -+-..+.+..+..+|.++|++++|++.||+||
T Consensus 34 g~qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GR 113 (538)
T KOG0252|consen 34 GLQWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGR 113 (538)
T ss_pred chhHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 34555554 445577788888888888888776544 32211100 11127889999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhccc-------hHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHH
Q 015396 112 KPVIIMGTASVVIFNTLFGLSV-------NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGL 183 (407)
Q Consensus 112 r~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 183 (407)
|+++...+++..++++++++.. -.+++...|++.|+|.|.-.|. .++.+|..-++.||...+......+.|.
T Consensus 114 K~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~Gi 193 (538)
T KOG0252|consen 114 KKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGI 193 (538)
T ss_pred hhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhH
Confidence 9999999999999998777642 2578999999999999998886 8889999999999998888777677666
Q ss_pred HHHHHhhhhhcCCCCCCCCccccccccc--CCCChhHHHHHHHHHHHHHHHHhccccCCCCCCCCcch-hhhhhhhhhh-
Q 015396 184 IIGPALGGFLAQPAEKYPNLFSSESLFG--KFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDS-CDVSYDALES- 259 (407)
Q Consensus 184 ~~~~~~~~~l~~~~~~~~~~~gw~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~-~~~~~~~~~~- 259 (407)
..|.+++-.+....+. .++-+.... ..-||+.+.+.+++++..+...+.+||+++......++ +++. ++.+.
T Consensus 194 laG~ivt~Iv~~~fe~---~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~-~d~~k~ 269 (538)
T KOG0252|consen 194 LAGGIVALIVSAIFEK---IFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAA-GDMKKV 269 (538)
T ss_pred hhccHHHHHHHHHHhc---cCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhh-hccccc
Confidence 6666655554421110 111111110 23478888888888888888888899998765211111 1100 00000
Q ss_pred -----chhhhhhhhccccccc----cccccc---chhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHH
Q 015396 260 -----ASAEVKEEEGREATPK----KSLLKN---WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGE 327 (407)
Q Consensus 260 -----~~~~~~~~~~~~~~~~----~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~ 327 (407)
..++..+...+.+... ...+.. +.+...+...+++-...+..+.+....+.. .|+.+.+..+
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~------ig~~~~~~~~ 343 (538)
T KOG0252|consen 270 LSVDIEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSA------IGVIPSANTY 343 (538)
T ss_pred cccccchhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHh------hccCCCcchH
Confidence 0001111111111111 112222 333445555555555544444433333332 4444443333
Q ss_pred --------HHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHHHHHhhhhHHHh-hhhhhhHhhhhhhH--------
Q 015396 328 --------VLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAM-LSGFGLAFLLNCAS-------- 390 (407)
Q Consensus 328 --------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-------- 390 (407)
...+......+-+..+...+.|++||++..+.++.++.+..+.+...-+ ......+++++...
T Consensus 344 ~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGP 423 (538)
T KOG0252|consen 344 HELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGP 423 (538)
T ss_pred HHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCC
Confidence 1222222222212235566789999999999999999888877654332 22222222222222
Q ss_pred --HHHHHHhhcCCCCCCCC
Q 015396 391 --VVKNLLSSSGPGSKRSC 407 (407)
Q Consensus 391 --~~~~~~~~~~p~~~rs~ 407 (407)
......+|.+|.+.|++
T Consensus 424 n~ttfivpaE~FParvR~t 442 (538)
T KOG0252|consen 424 NATTFIVPAEIFPARVRST 442 (538)
T ss_pred CceeEEeehhhchHHHhhh
Confidence 22334688888888873
No 97
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.82 E-value=4.3e-18 Score=163.13 Aligned_cols=149 Identities=17% Similarity=0.171 Sum_probs=123.2
Q ss_pred HHHHHHHHHHHHhhhhhhchhhhHHHH-HHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccc-cCChHHHHHH
Q 015396 41 TELFSIWIIVLCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVIIMG 118 (407)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr-~Grr~~~~~~ 118 (407)
+.++.++...+...+..+...+.++.+ .+++|.+.++ .+++.+.+........++.|+++|| +|||+.+..+
T Consensus 21 ~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~------a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g 94 (500)
T PRK09584 21 KAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEAD------SITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLG 94 (500)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHH
Confidence 345666777777778777777777744 5889999988 7888877776666667799999999 5999999999
Q ss_pred HHHHHHHHHHhhccc-hHHHHHHHHHHHhhhccchhHH-HHHHhhhccccc--hhhhhHHHHHHHHHHHHHHHHhhhhhc
Q 015396 119 TASVVIFNTLFGLSV-NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEH--QALGLSTVSTAWGIGLIIGPALGGFLA 194 (407)
Q Consensus 119 ~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~--r~~~~~~~~~~~~~g~~~~~~~~~~l~ 194 (407)
.++..++.+++++++ +.+.+++.|++.|++.|...+. .+++.|++|+++ |..++++++.+.++|..+||.+++++.
T Consensus 95 ~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~ 174 (500)
T PRK09584 95 AIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLA 174 (500)
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998888864 5667778899999998887775 889999998653 456788889999999999999999999
Q ss_pred C
Q 015396 195 Q 195 (407)
Q Consensus 195 ~ 195 (407)
+
T Consensus 175 ~ 175 (500)
T PRK09584 175 A 175 (500)
T ss_pred H
Confidence 8
No 98
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.82 E-value=1.4e-17 Score=153.95 Aligned_cols=284 Identities=17% Similarity=0.256 Sum_probs=210.0
Q ss_pred HHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccC-ChHHHHHHHHHHH
Q 015396 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG-RKPVIIMGTASVV 123 (407)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G-rr~~~~~~~~~~~ 123 (407)
.+....++.++..+.+.|.++.+.++.|.|.+| +|.+.++..+...++++++|.++||.+ +||.+.++.++.+
T Consensus 6 rLs~~~f~~f~~~G~~~p~~~~~L~~~G~s~~q------IG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~ 79 (400)
T PF03825_consen 6 RLSLMYFLYFFAYGAFLPYLPLYLESRGFSGTQ------IGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSA 79 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHH
Confidence 456677788888889999999999999999999 999999999999999999999999986 5778878778777
Q ss_pred HHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhh-hhhcCCCCCCC
Q 015396 124 IFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG-GFLAQPAEKYP 201 (407)
Q Consensus 124 ~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~-~~l~~~~~~~~ 201 (407)
+........++++.+++..++..+......|. .++..+... ++++-.|-.....++|.+++.... +.+...
T Consensus 80 ~~~~~~~~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~----- 152 (400)
T PF03825_consen 80 LALLLLAFSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGY----- 152 (400)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhh-----
Confidence 77777777888998888888877776666664 777766665 445567777777888887775542 233221
Q ss_pred CcccccccccCCCChhHHHHHHHHHHHHHHHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhccccccccccccc
Q 015396 202 NLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKN 281 (407)
Q Consensus 202 ~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (407)
.++. .....+++.+...++.....+.+|+.|++++.+++.++ +...+..+++|+
T Consensus 153 --~~~~------~~~~~~~i~~~~~~ll~~~~l~lp~~~~~~~~~~~~~~------------------~~~~~~~~llk~ 206 (400)
T PF03825_consen 153 --LGIS------GTSLIFYIAAILSLLLAGFALFLPKTPPKRSAKESVKK------------------LLGLDALKLLKN 206 (400)
T ss_pred --hccc------cccHHHHHHHHHHHHHHHHHHhCCCCccccccCCCccc------------------ccchHHHHHhcC
Confidence 1111 11122344444444444445667877633322211111 112234578999
Q ss_pred chhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccc-cchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHH
Q 015396 282 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLN-YSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIA 360 (407)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 360 (407)
|++....+..++.......+..+.+.|+++ .| .+....+.++++..++.++.. +..+++.+|+|.++++.++
T Consensus 207 ~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~------~gg~~~~~~g~~~~l~~~aEi~~f-~~~~~~~~r~g~~~ll~~a 279 (400)
T PF03825_consen 207 PRFLVFLLAAFLIGISHAAYYTFFSIYLQE------LGGYSGSTIGILWALGVVAEIPFF-FFSGRFLKRFGIKWLLLLA 279 (400)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cccchhhHHHHHHHHHHHHHHHHH-HHHHHHHHhcCHHHHHHHH
Confidence 999998888888888888888999989887 45 777888888888888888886 4889999999999999999
Q ss_pred HHHHHHHHhhhhHH
Q 015396 361 GVLTIPLLTSYPYI 374 (407)
Q Consensus 361 ~~~~~~~~~~~~~~ 374 (407)
.+..++=..++.+.
T Consensus 280 ~~~~~vR~~l~a~~ 293 (400)
T PF03825_consen 280 LVAYAVRWLLYAYF 293 (400)
T ss_pred HHHHHHHHHHHHHh
Confidence 99988888777666
No 99
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.81 E-value=1.7e-17 Score=155.33 Aligned_cols=314 Identities=17% Similarity=0.155 Sum_probs=198.9
Q ss_pred chHHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhccc----ccCChHH
Q 015396 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD----RYGRKPV 114 (407)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~d----r~Grr~~ 114 (407)
|.++++.++...+...+......+.++.+.+++|.+... .+++..+..+...+.+|+.|+++| |+||||.
T Consensus 2 ~~~~li~~~~~~~Giq~~~~l~~~~l~~yl~~lg~~~~~------~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp 75 (477)
T TIGR01301 2 PLRKLLRVASVAAGVQFGWALQLSLLTPYVQELGIPHAW------ASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRP 75 (477)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHH
Confidence 456777777777777888899999999999999999988 999999999999999999999999 5999999
Q ss_pred HHHH-HHHHHHHHHHhhccchHH-----------------HHHHHHHHHhhhccchhH-HHHHHhhhccccch--hhhhH
Q 015396 115 IIMG-TASVVIFNTLFGLSVNFW-----------------MAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQ--ALGLS 173 (407)
Q Consensus 115 ~~~~-~~~~~~~~~~~~~~~~~~-----------------~l~~~r~l~G~~~g~~~~-~~~~~~~~~~~~~r--~~~~~ 173 (407)
++.. .+...++.++.+++++.+ .++++-.+..++.....+ ..++++|.+|+++| +.+.+
T Consensus 76 ~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~ 155 (477)
T TIGR01301 76 FIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANA 155 (477)
T ss_pred HHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHH
Confidence 8875 666666667776765543 223333344445555444 59999999998865 57899
Q ss_pred HHHHHHHHHHHHHHHhhhhhcCCCCCCCCccccc-----ccccCCCChhHHHHHHHHHHHHH-HHHhccccCCCCCCCCc
Q 015396 174 TVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSE-----SLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDD 247 (407)
Q Consensus 174 ~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~ 247 (407)
+.+...++|.++|+.++++.-... .+++. ... ..+.+..|++.++..++.. +..+..+|.+...+++.
T Consensus 156 ~~~~~~~lG~ilg~~~g~~~~~~~-----~~~~~~~~~~~~~-~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~ 229 (477)
T TIGR01301 156 YFSFFMAIGNVLGYAAGAYSGLYK-----IFPFTKTEACGVS-CANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDF 229 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHH-----hcccccccccccc-cchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccc
Confidence 999999999999999998752100 11110 000 1246677777777666544 44667788764322111
Q ss_pred chhhhhhhhhhhchhhhhhhhcccccccccccc-----cchhHHHHHHHHHHhhccchhhhHHhhhccCCCccC----cc
Q 015396 248 DSCDVSYDALESASAEVKEEEGREATPKKSLLK-----NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLG----GL 318 (407)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 318 (407)
+++ +.++.++ .......+++++ .+.++..+++.++..+..+.+..+...|..+..... ..
T Consensus 230 ~~~-----~~~~~~~------~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~ 298 (477)
T TIGR01301 230 INS-----EAAPPSK------HGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGA 298 (477)
T ss_pred hhh-----hcccccc------cchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchh
Confidence 000 0000000 000111222222 356777888888877766666555555543221110 00
Q ss_pred ccchh--hHHHHHHHHHHHHHHHHHhHHHHHHHHhch-hHHHHHHHHHHHHHHhhhhHHHh
Q 015396 319 NYSTQ--MVGEVLAITGFSLLVFQLSLYPFLERILGP-IMVARIAGVLTIPLLTSYPYIAM 376 (407)
Q Consensus 319 g~s~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 376 (407)
.++.. .-.+......+...+.++ +..++.+++|+ |+...++.++.++++....+...
T Consensus 299 ~y~~gvr~G~~~l~~~s~~~~i~s~-~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~ 358 (477)
T TIGR01301 299 KYDDGVRAGAFGLMLNSVVLGITSI-GMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTY 358 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHh
Confidence 11100 122334445555556664 77889999985 66668888888888777765553
No 100
>PRK09669 putative symporter YagG; Provisional
Probab=99.79 E-value=4e-17 Score=155.09 Aligned_cols=286 Identities=16% Similarity=0.073 Sum_probs=177.1
Q ss_pred CchHHHHHHHHHHHHhhhhhhchhhhH-HHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccc----cCCh
Q 015396 38 LPITELFSIWIIVLCTALPISSLFPFL-YFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR----YGRK 112 (407)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr----~Grr 112 (407)
.++++.+.-.+..+...+....+..++ +++.+++|++..+ +|.+.++..+..++..|+.|+++|| +|||
T Consensus 6 l~~~~~~~yg~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~------~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grr 79 (444)
T PRK09669 6 LTTKDKIGYGLGDTACNLVWQTVMLFLAYFYTDVFGLSAAI------MGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQF 79 (444)
T ss_pred ccHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHcccceeeEeeecCCCCCCCc
Confidence 444544433334344444344444444 4777889999999 9999999999999999999999998 7875
Q ss_pred -HHHHHHHHHHHHHHHHhhccc------hHHHHHHHHHHHhhhccchh-HHHHHHhhhc-cccchhhhhHHHHHHHHHHH
Q 015396 113 -PVIIMGTASVVIFNTLFGLSV------NFWMAVLTRFLLGSLNGLLG-PIKAYACEIF-REEHQALGLSTVSTAWGIGL 183 (407)
Q Consensus 113 -~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~r~l~G~~~g~~~-~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~ 183 (407)
+.++.+.+..+++.++....+ ..+++++..++.+.+..... |..++.+|+. ++++|.+..++......+|.
T Consensus 80 rp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~ 159 (444)
T PRK09669 80 RPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGG 159 (444)
T ss_pred chhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHH
Confidence 555567677766665544433 24566666666666544444 4488999988 56889998888888888888
Q ss_pred HHHHHhhhhhcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHH-HHhccccCCCCCCCCcchhhhhhhhhhhchh
Q 015396 184 IIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASA 262 (407)
Q Consensus 184 ~~~~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 262 (407)
.+++.+...+... ++... . +.+|+..+.+.+++.++..+ ..+..+|..++.++++
T Consensus 160 ~i~~~~~~pl~~~-------~~~~~-~-~~g~~~~~~i~~ii~~v~~~~~~~~~~e~~~~~~~~~--------------- 215 (444)
T PRK09669 160 LIVSVIALPLVDI-------LGKGD-E-QKGYFYAMMVMGLLGVVLFFCCFFMTKERYTPEVDNS--------------- 215 (444)
T ss_pred HHHHHHHHHHHHH-------hCCCc-h-hhhHHHHHHHHHHHHHHHHHHHhCCeEEecCCCCcCC---------------
Confidence 8887766555441 11100 0 34566555666665554433 3344455422211000
Q ss_pred hhhhhhcccccccccccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHh
Q 015396 263 EVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLS 342 (407)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~ 342 (407)
.+..+..+.+++|++++......++.............+|.... .+ +....+.+.....+..+++. +
T Consensus 216 ------~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~-----~~-~~~~~~~~~~~~~i~~ii~~-~ 282 (444)
T PRK09669 216 ------SSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYV-----LL-RPDLATLFLVTGMIAGLFGA-L 282 (444)
T ss_pred ------CCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeeee-----cC-CHHHHHHHHHHHHHHHHHHH-H
Confidence 00122456778999988887776665555444444333333322 22 23333444444455556655 5
Q ss_pred HHHHHHHHhchhHHHHHHHHHHHH
Q 015396 343 LYPFLERILGPIMVARIAGVLTIP 366 (407)
Q Consensus 343 ~~~~l~~~~~~~~~~~~~~~~~~~ 366 (407)
+.+++.||+|+|+....+.....+
T Consensus 283 ~~~~l~~r~gk~~~~~~~~~~~~~ 306 (444)
T PRK09669 283 LSERLLGKFDRVRAFKWTIVAFVI 306 (444)
T ss_pred HHHHHHHHhChHHHHHHHHHHHHH
Confidence 788999999999998877765554
No 101
>PTZ00207 hypothetical protein; Provisional
Probab=99.78 E-value=7.7e-17 Score=153.99 Aligned_cols=130 Identities=13% Similarity=0.156 Sum_probs=109.7
Q ss_pred hhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhcc----
Q 015396 57 ISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS---- 132 (407)
Q Consensus 57 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~---- 132 (407)
.+.+..+.+.+.+++|++..+ .+++.++. .....++++.|+++||+|||+++.++.+++.++.++++++
T Consensus 43 ~y~fsv~s~~L~~~lgls~~~------l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~ 115 (591)
T PTZ00207 43 MYAFNLISGAMQARYNLTQRD------LSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEV 115 (591)
T ss_pred HHHHHHHHHHHHHHhCcCHHH------HHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 345567778999999999998 88887764 3445678889999999999999999999999999999887
Q ss_pred --chHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHH-HHHhhhhhc
Q 015396 133 --VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLII-GPALGGFLA 194 (407)
Q Consensus 133 --~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~~~~~l~ 194 (407)
++++.+++.|++.|++.+...+. ...+.+++| ++||++.|+...+.++|.++ +++..+++.
T Consensus 116 i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~ 180 (591)
T PTZ00207 116 IEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS 180 (591)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 68999999999999998877664 788899997 78999999999999999975 555555543
No 102
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.77 E-value=8.6e-17 Score=153.81 Aligned_cols=293 Identities=13% Similarity=0.100 Sum_probs=184.2
Q ss_pred HHHHHHHHHHHHhhhhhhchhhhHH-HHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhccc----ccCC-hHH
Q 015396 41 TELFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD----RYGR-KPV 114 (407)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~d----r~Gr-r~~ 114 (407)
++.+.-.+..+...+......++++ ++.+.+|++... +|.+..+.-+.-++..|+.|.++| |+|| |+.
T Consensus 6 ~~~~~yg~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~------vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~ 79 (473)
T PRK10429 6 TTKLSYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGL------VGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPW 79 (473)
T ss_pred hHHHhhccchhHHhHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchh
Confidence 3334333455555666666677666 556677999999 999999999999999999999999 6698 556
Q ss_pred HHHHHHHHHHHHHHhhccc------hHHHHHHHHHHHhhhccchhH-HHHHHhhhc-cccchhhhhHHHHHHHHHHHHHH
Q 015396 115 IIMGTASVVIFNTLFGLSV------NFWMAVLTRFLLGSLNGLLGP-IKAYACEIF-REEHQALGLSTVSTAWGIGLIIG 186 (407)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~------~~~~l~~~r~l~G~~~g~~~~-~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~~ 186 (407)
++++.+..+++..++...+ .++.+++..++.+++.....+ -.++..|.. ++++|.+..++-..+.++|..+.
T Consensus 80 il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~ 159 (473)
T PRK10429 80 ILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVT 159 (473)
T ss_pred HhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 6677777777765554322 134455556666776656555 488899998 58999999988777777776666
Q ss_pred HHhhhhhcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHH-HHHhccccCCCCCCCCcchhhhhhhhhhhchhhhh
Q 015396 187 PALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVK 265 (407)
Q Consensus 187 ~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (407)
+.+...+.+ .+|... ...+|+....+.++..++.. +..+..||.+.....+.++++
T Consensus 160 ~~~~~~~~~-------~~g~~~--~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~-------------- 216 (473)
T PRK10429 160 AGFTLPFVN-------YVGGGD--RGFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQVSAEGS-------------- 216 (473)
T ss_pred HHHHHHHHH-------HhCCCc--hhhhHHHHHHHHHHHHHHHHHHHHcCceecCCcccccccccc--------------
Confidence 655544432 111100 02234544455555544433 334446665322111100000
Q ss_pred hhhcccccccccccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHH
Q 015396 266 EEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYP 345 (407)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~ 345 (407)
+.+.....+.+++|+.++..++..++............++|.... .+ +....+.+....+++.+++. ++.+
T Consensus 217 --~~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~-----~~-~~~~~~~~~~~~~i~~ii~~-~~~~ 287 (473)
T PRK10429 217 --HLTLKDIVALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYV-----IG-DADLFPYYLSYAGAANLVTL-ILFP 287 (473)
T ss_pred --CCCHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEE-----CC-CHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 001112345567898888887777777665555555555444332 22 45556667776667777776 4789
Q ss_pred HHHHHhchhHHHHHHHHHHHHHHhhh
Q 015396 346 FLERILGPIMVARIAGVLTIPLLTSY 371 (407)
Q Consensus 346 ~l~~~~~~~~~~~~~~~~~~~~~~~~ 371 (407)
++.||+|+|+.+..+..+..++.+.+
T Consensus 288 ~l~~r~gkk~~~~~~~~~~~~~~~~~ 313 (473)
T PRK10429 288 RLVKSLSRRILWAGASIFPVLSCGVL 313 (473)
T ss_pred HHHHHcCcHHHHHHHHHHHHHHHHHH
Confidence 99999999999887777655554443
No 103
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.76 E-value=1.5e-16 Score=146.14 Aligned_cols=202 Identities=17% Similarity=0.243 Sum_probs=163.0
Q ss_pred ccCCCCchHHHHHHHHHHHHhhhhhhchhhhHHHHHHhh--cccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccC
Q 015396 33 DTKSGLPITELFSIWIIVLCTALPISSLFPFLYFMIKDF--QIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG 110 (407)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G 110 (407)
.+.++.+||.++...+..++.....+++.+..-++.+++ +.+.+. .|++.++..++.+++++.+|+++.|.+
T Consensus 26 ~~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~f------fG~viaa~slg~~i~~liF~~Ws~k~~ 99 (488)
T KOG2325|consen 26 LDERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATF------FGLVIAASSLGHAIFSLIFGIWSNKTG 99 (488)
T ss_pred ccccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcch------hhHHHHHHHHHHHhcchhhcccccccC
Confidence 344567889999999999999999999999998888884 445555 999999999999999999999999999
Q ss_pred C-hHHHHHHHHHHHHHHHHh-hc---cc-hHHHHHHHHHHHhhhccchhHHHHHHhhhccccchhhhhHHHHHHHHHHHH
Q 015396 111 R-KPVIIMGTASVVIFNTLF-GL---SV-NFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLI 184 (407)
Q Consensus 111 r-r~~~~~~~~~~~~~~~~~-~~---~~-~~~~l~~~r~l~G~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 184 (407)
. |+.++.+.++..++++++ ++ .+ ..+.++++|++.|+|.+......+|+++....++|.++++....+..+|..
T Consensus 100 ~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~i 179 (488)
T KOG2325|consen 100 SVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGII 179 (488)
T ss_pred CcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHH
Confidence 7 888999999999999988 33 23 678999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhcCCCCCCCCccccccc--ccCCCChhHHHHHHHHHHHHHH-HHhccccCCCCCCC
Q 015396 185 IGPALGGFLAQPAEKYPNLFSSESL--FGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHND 245 (407)
Q Consensus 185 ~~~~~~~~l~~~~~~~~~~~gw~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~ 245 (407)
+||.++..+....+ -|+... ..-+.+..+.++.+++.++.++ +.++++|.++...+
T Consensus 180 lGp~~q~~f~~Lg~-----~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~ 238 (488)
T KOG2325|consen 180 LGPTIQLAFTPLGE-----KGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIID 238 (488)
T ss_pred HhHHHHHHHhhhcC-----CceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCccc
Confidence 99999988876331 122211 1023366777888888777554 45667777665443
No 104
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.75 E-value=2.1e-16 Score=150.32 Aligned_cols=299 Identities=14% Similarity=0.044 Sum_probs=188.4
Q ss_pred chHHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccC-----ChH
Q 015396 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG-----RKP 113 (407)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G-----rr~ 113 (407)
+...+..+...++..++.........+.+.+++|+++++ ++...+...+...+-.+ +|+++||++ ||+
T Consensus 24 ~~~~~~~~~~~y~~qGl~~l~~~~~~~~l~~~lg~s~~~------i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~ 96 (468)
T TIGR00788 24 PRVVLAIGLQVLFVKGIAGLMRLPLSPMLTDDLGLDGAR------YQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRW 96 (468)
T ss_pred cchHHHHHHHHHHHhhHHHHhhhhhhHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchH
Confidence 334455666677788887333444455667789999999 98989999999887555 999999998 777
Q ss_pred HHHHHHHHHH-HHHHHhhccchHH-HHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhH---HHHHHHHHHHHHHH
Q 015396 114 VIIMGTASVV-IFNTLFGLSVNFW-MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLS---TVSTAWGIGLIIGP 187 (407)
Q Consensus 114 ~~~~~~~~~~-~~~~~~~~~~~~~-~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~---~~~~~~~~g~~~~~ 187 (407)
.++++.++.. ++....+..++.. ...+.+++.+++.+...++ .++..|..+ +++....+ ......++|..+|+
T Consensus 97 ~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~ 175 (468)
T TIGR00788 97 YLVLSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISS 175 (468)
T ss_pred HHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHH
Confidence 7777776663 4444444444533 4444778889988887775 999999998 55544333 33344458999999
Q ss_pred HhhhhhcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhh
Q 015396 188 ALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEE 267 (407)
Q Consensus 188 ~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (407)
.++|.+.+ +.+|+..+++.++..++..+...+++|+++....+..+.+..... .......+.
T Consensus 176 ~l~G~l~~----------------~~~~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 237 (468)
T TIGR00788 176 LLGGPLLD----------------KTLTRILFLITAALLLLQLFVSNLSKERRAFVRPRIGTYLEMNMA--LLTLGVLAN 237 (468)
T ss_pred HHHHHHHH----------------hcCcchHHHHHHHHHHHHHHHHHhcccccccccccccccchhhhh--hhhhhHHHH
Confidence 99999998 344555557777766666555677788642111110000000000 000000000
Q ss_pred hcccccccccccccchhHHHHHHHHH-HhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHH
Q 015396 268 EGREATPKKSLLKNWPLMSSIIVYCV-FSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPF 346 (407)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (407)
.++.....+..+++|.++...+..++ +....... .+.++..+ ..+|+++.+.|......+++.+++.. ..++
T Consensus 238 ~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~~---~~~f~~~~---~~lG~s~~~~G~~~~~~~v~~i~g~~-~~~~ 310 (468)
T TIGR00788 238 VKVQILGLRGAIQLLEIAKPLIFIFLSYANLPGAS---GSVFCATT---QCLPGGPSFSGMSKVVGNLGSLCGVG-GYDR 310 (468)
T ss_pred HHHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCCC---ceeEEEEc---ccCCCCcchhhhHHHHHHHHHHHHHH-HHHH
Confidence 00111233445677888775555554 22221111 11111111 23899999999999999999999986 6677
Q ss_pred HHHHhchhHHHHHHHHHHHHHHhh
Q 015396 347 LERILGPIMVARIAGVLTIPLLTS 370 (407)
Q Consensus 347 l~~~~~~~~~~~~~~~~~~~~~~~ 370 (407)
..+|++.|+.+.++.++.+++...
T Consensus 311 ~~~~~~~r~~l~~~~~l~~~~~~~ 334 (468)
T TIGR00788 311 FLKTFPYRLLFGVTTLLYTLSSLF 334 (468)
T ss_pred HHhhCCHHHHHHHHHHHHHHHHhC
Confidence 778999999999988888776644
No 105
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.75 E-value=1.1e-15 Score=143.88 Aligned_cols=149 Identities=16% Similarity=0.262 Sum_probs=121.3
Q ss_pred HHHHHHHHHHHHhhhhhhchhhhHHHH-HHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhccccc-CChHHHHHH
Q 015396 41 TELFSIWIIVLCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-GRKPVIIMG 118 (407)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-Grr~~~~~~ 118 (407)
+.+..++...+...+..+.....+|.+ .+++|.++.+ .+.+.+.+.....++.+++|+++||+ ||||+++++
T Consensus 9 ~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~------a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG 82 (493)
T PRK15462 9 RAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNH------AYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLG 82 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHH
Confidence 556666777777777777788888855 5678999998 99999999999999999999999999 999999999
Q ss_pred HHHHHHHHHHhhccc-hHHHHHHHHHHHhhhccchhH-HHHHHhhhcccc--chhhhhHHHHHHHHHHHHHHHHhhhhhc
Q 015396 119 TASVVIFNTLFGLSV-NFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREE--HQALGLSTVSTAWGIGLIIGPALGGFLA 194 (407)
Q Consensus 119 ~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~~~g~~~~-~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 194 (407)
.++..++.++.+..+ +...+++...+.+++.|...+ ..++++|.+|++ +|..++++.+...++|..++|.+.+++.
T Consensus 83 ~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~ 162 (493)
T PRK15462 83 ALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQ 162 (493)
T ss_pred HHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHH
Confidence 999999887766543 223344444445566666656 488999999975 6999999999999999999999999998
Q ss_pred C
Q 015396 195 Q 195 (407)
Q Consensus 195 ~ 195 (407)
+
T Consensus 163 ~ 163 (493)
T PRK15462 163 E 163 (493)
T ss_pred h
Confidence 8
No 106
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.74 E-value=1.1e-16 Score=151.38 Aligned_cols=272 Identities=15% Similarity=0.134 Sum_probs=196.4
Q ss_pred hHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhccc----ccCChHH-HHHHHHHHHHHHHHhhcc-c---
Q 015396 63 FLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD----RYGRKPV-IIMGTASVVIFNTLFGLS-V--- 133 (407)
Q Consensus 63 ~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~d----r~Grr~~-~~~~~~~~~~~~~~~~~~-~--- 133 (407)
..+.+.+.+|+++.. .|++..+..+..++..|+.|.++| |+||||. ++++.+..+++.+++... +
T Consensus 24 ~~~f~~~~~gl~~~~------~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~ 97 (428)
T PF13347_consen 24 LLYFYTDVLGLSPAL------AGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGL 97 (428)
T ss_pred HHHHHHHHcCCCHHH------HHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchh
Confidence 345677888999998 999999999999999999999999 8998665 456778888877777655 3
Q ss_pred ----hHHHHHHHHHHHhhhccchhH-HHHHHhhhcc-ccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCccccc
Q 015396 134 ----NFWMAVLTRFLLGSLNGLLGP-IKAYACEIFR-EEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSE 207 (407)
Q Consensus 134 ----~~~~l~~~r~l~G~~~g~~~~-~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~ 207 (407)
...++.+..++..++...... ..++..|..+ +++|.+..+.-..+..+|..+...+.+.+.+..++...
T Consensus 98 ~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~----- 172 (428)
T PF13347_consen 98 SFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDT----- 172 (428)
T ss_pred hhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcc-----
Confidence 233456666666777666555 4899999997 57999999999999999998777777777652221100
Q ss_pred ccccCCCChhHHHHHHHHHHHHHH-HHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccccccccccccchhHH
Q 015396 208 SLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMS 286 (407)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (407)
..+|+....+.+++.++..+ ..+..+|.++..+++++ +.+..+..+++++||+++.
T Consensus 173 ----~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~~~-------------------~~~~~~~~~~~~~nr~~~~ 229 (428)
T PF13347_consen 173 ----SNGYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQEK-------------------KISLRDSLRSLFRNRPFRI 229 (428)
T ss_pred ----chHHHHHHHHHHHHHHHHhhhhhheeeecccccccccc-------------------ccccccchhhhcccchHHH
Confidence 12466666666666665443 45566772111111111 1123446788899999999
Q ss_pred HHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHHH
Q 015396 287 SIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIP 366 (407)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 366 (407)
..+..++............++|.+.. .|.+ ...+.+.....++.+++. ++.+++.||+|+|+.+..+..+.++
T Consensus 230 l~~~~~~~~~~~~~~~~~~~y~~~~v-----l~~~-~~~~~~~~~~~~~~~v~~-~~~~~l~~r~gk~~~~~~~~~~~~~ 302 (428)
T PF13347_consen 230 LLLAFFLQWLAFALMNTFLPYYFTYV-----LGNE-GLISIFMLIFFVASIVGS-PLWGRLSKRFGKKKVYIIGLLLAAL 302 (428)
T ss_pred HHHHHHHHHhhhhhhhhHHHHHHHHH-----hcCc-hhhHHHHHHHHHHHHHHH-HHHHHHHHHccceeehhhhHHHHHH
Confidence 98888888877777777777776665 4433 455666677777777776 4889999999999999999999988
Q ss_pred HHhhhhHHH
Q 015396 367 LLTSYPYIA 375 (407)
Q Consensus 367 ~~~~~~~~~ 375 (407)
+.+.+.+..
T Consensus 303 ~~~~~~~~~ 311 (428)
T PF13347_consen 303 GFLLLFFLG 311 (428)
T ss_pred HHHHHHHHH
Confidence 888776665
No 107
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.73 E-value=7.8e-16 Score=139.91 Aligned_cols=295 Identities=15% Similarity=0.128 Sum_probs=183.3
Q ss_pred HHHHHHHHHHHHhhhhhhchhhhHHHHHHh-hcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHH
Q 015396 41 TELFSIWIIVLCTALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (407)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (407)
+..+......+..++..+...|..+...++ .|++.++ +|.+.++..+...+.+|+.|.++||+|.||-++...
T Consensus 7 ~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~------iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i 80 (412)
T PF01306_consen 7 KNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTE------IGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFI 80 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHH------HHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHH------HHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHH
Confidence 456667777777788889999999977764 8999999 999999999999999999999999999776655443
Q ss_pred HHHH--HHH-HHhhccchH-HHHHHHHHHHhhh----ccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhh
Q 015396 120 ASVV--IFN-TLFGLSVNF-WMAVLTRFLLGSL----NGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (407)
Q Consensus 120 ~~~~--~~~-~~~~~~~~~-~~l~~~r~l~G~~----~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 190 (407)
.... .+. +...+.+-. ..+.++-++.|+. .....+. -+++.++. ++.+.-.|-..+..++|.+++..++
T Consensus 81 ~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~ 158 (412)
T PF01306_consen 81 AILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLA 158 (412)
T ss_dssp HHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHh
Confidence 3222 122 221222111 1122222333333 2233333 44444433 3445567778889999999999999
Q ss_pred hhhcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhcc-ccCCCCCCCCcchhhhhhhhhhhchhhhhhhhc
Q 015396 191 GFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWL-PETLHRHNDDDDSCDVSYDALESASAEVKEEEG 269 (407)
Q Consensus 191 ~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (407)
|.+.+. +....+++..+.+++..++.... |+.++..+..+.+.++. ++
T Consensus 159 G~L~~i-----------------~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~~~~--------------~~ 207 (412)
T PF01306_consen 159 GILFNI-----------------NPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADALGAKK--------------DK 207 (412)
T ss_dssp HHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSSS------------------
T ss_pred heeeee-----------------CccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcccccCC--------------CC
Confidence 999861 12233455555544444443333 33333221111100000 00
Q ss_pred ccccccccccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHH
Q 015396 270 REATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLER 349 (407)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 349 (407)
...+...+++|+|++|...+...........+...++.|....... .+.+....|++.+..-+...+.. .+.+++.+
T Consensus 208 ~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~--~~~g~~~~G~l~s~~v~~E~~~m-~~~p~li~ 284 (412)
T PF01306_consen 208 VSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQS--AGQGNQMYGYLWSVQVFLEALMM-FFSPWLIN 284 (412)
T ss_dssp --HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSS--HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred CcHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--cccChhHHhHHHHHHHHHHHHHH-HHHHHHHH
Confidence 1122456789999999988777666666666666667666543222 45667789999999888888887 48999999
Q ss_pred HhchhHHHHHHHHHHHHHHhhhhHHHhh
Q 015396 350 ILGPIMVARIAGVLTIPLLTSYPYIAML 377 (407)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (407)
|+|.|+.+.++..++.+=....++.++.
T Consensus 285 rig~k~~Lllag~i~~iRi~~~~~~~~~ 312 (412)
T PF01306_consen 285 RIGAKNLLLLAGVIMAIRIIGSGFATNP 312 (412)
T ss_dssp HH-HHHHHHHHHHHHHHHHHHHHT--SH
T ss_pred hcChHhHHHHHHHHHHHHHHHHhhhcch
Confidence 9999999999988888777766655543
No 108
>PRK09848 glucuronide transporter; Provisional
Probab=99.73 E-value=3e-15 Score=142.46 Aligned_cols=288 Identities=18% Similarity=0.132 Sum_probs=173.5
Q ss_pred CchHHHHHHHHHHHHhhhhhhchhhhHH-HHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhccccc----CCh
Q 015396 38 LPITELFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY----GRK 112 (407)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~----Grr 112 (407)
.++++.+.-.+..+..........++++ ++.+.+|++..+ +|.+.+...+..++..++.|+++||. |||
T Consensus 5 ~~~~~~~~yg~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~------~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~ 78 (448)
T PRK09848 5 LSWRTIVGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAA------AGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKF 78 (448)
T ss_pred ccHHHHHhhccchHHhHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHhhhhheeeeecCCCCCcCc
Confidence 3445554444455555566656656555 566678999999 99999999999999999999999996 777
Q ss_pred HHH-HHHHHHHHHHHHHh-hc----cc--hHHHHHHHHHHHhhhccchhH-HHHHHhhhcc-ccchhhhhHHHHHH----
Q 015396 113 PVI-IMGTASVVIFNTLF-GL----SV--NFWMAVLTRFLLGSLNGLLGP-IKAYACEIFR-EEHQALGLSTVSTA---- 178 (407)
Q Consensus 113 ~~~-~~~~~~~~~~~~~~-~~----~~--~~~~l~~~r~l~G~~~g~~~~-~~~~~~~~~~-~~~r~~~~~~~~~~---- 178 (407)
|.. .++.+...+..++. .. .. ..+.+++..++.+++.+...+ ..++..+..+ +++|.+..+.-..+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~ 158 (448)
T PRK09848 79 RPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLT 158 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHH
Confidence 654 55555444443332 21 11 223344455667777666655 3666666664 56788876665443
Q ss_pred -HHHHHHHHHHhhhhhcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHH-HHHHhccccCCCCCCCCcchhhhhhhh
Q 015396 179 -WGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDA 256 (407)
Q Consensus 179 -~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~ 256 (407)
..++..++|.+++..... . ...|.....+.++..++. ++.....||+++.+.++.
T Consensus 159 ~~~~~~~~~p~i~~~~g~~-------~-------~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~~~~~~--------- 215 (448)
T PRK09848 159 FVCLAFLIGPSIKNSSPEE-------M-------VSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIVAQP--------- 215 (448)
T ss_pred HHHHHHHHHHHHHHhCCCc-------h-------hhhHHHHHHHHHHHHHHHHHHHHcCcEeccCCCccCC---------
Confidence 334555666665543210 0 001111112222332222 222334455432211100
Q ss_pred hhhchhhhhhhhcccccccccccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHH
Q 015396 257 LESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSL 336 (407)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~ 336 (407)
.....++.+++||+++...+..++............+.|.++. +|.++...++......++.
T Consensus 216 -------------~~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~ 277 (448)
T PRK09848 216 -------------SLKISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYV-----LNDTGLFTVLVLVQNLVGT 277 (448)
T ss_pred -------------CHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeee-----cCChHHHHHHHHHHHHHHH
Confidence 0112356788999998888877777766666666666666654 6666655554444445556
Q ss_pred HHHHHhHHHHHHHHhchhHHHHHHHHHHHHHHhhhhH
Q 015396 337 LVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPY 373 (407)
Q Consensus 337 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (407)
+++. ++.+++.||+++|+.+.++..+..++.+.+.+
T Consensus 278 ~~~~-~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~ 313 (448)
T PRK09848 278 VASA-PLVPGMVARIGKKNTFLIGALLGTCGYLLFFW 313 (448)
T ss_pred HHHH-HHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH
Confidence 6665 47889999999999999998887777665544
No 109
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.72 E-value=1.6e-15 Score=139.25 Aligned_cols=301 Identities=17% Similarity=0.156 Sum_probs=213.5
Q ss_pred CCchHHHHHHHHHHHHhhhhhhchhhhHH-HHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccc----cCC
Q 015396 37 GLPITELFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR----YGR 111 (407)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr----~Gr 111 (407)
+.+.++.+.-....+...........++. ++.+.+|+++.. +|.+..+.=+--++.-|+.|.++|| +||
T Consensus 8 kLs~~eki~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~------aG~iflv~RiiDAi~DP~~G~i~D~t~~r~Gr 81 (467)
T COG2211 8 KLSLKEKIGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAAL------AGTIFLVARIIDAITDPIMGFIVDRTRSRWGR 81 (467)
T ss_pred cccHHHHHhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHH------HHHHHHHHHHHHHHhcchheeeeccccccccc
Confidence 45556666555566666666666666666 666788999998 9999888888899999999999995 787
Q ss_pred h-HHHHHHHHHHHHHHHHhhccch------HHHHHHHHHHHhhhccchhH-HHHHHhhhcc-ccchhhhhHHHHHHHHHH
Q 015396 112 K-PVIIMGTASVVIFNTLFGLSVN------FWMAVLTRFLLGSLNGLLGP-IKAYACEIFR-EEHQALGLSTVSTAWGIG 182 (407)
Q Consensus 112 r-~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~g~~~~-~~~~~~~~~~-~~~r~~~~~~~~~~~~~g 182 (407)
+ +.++++.+..++.+.++-.+++ ....++...+.+++...... -.++.+|+.+ ++||.+..++-+...++|
T Consensus 82 fRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g 161 (467)
T COG2211 82 FRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLG 161 (467)
T ss_pred ccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHH
Confidence 4 5567777888888887776653 45566677888887666444 4788888885 789999999999999999
Q ss_pred HHHHHHhhhhhcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHH-HhccccCCCCCCCCcchhhhhhhhhhhch
Q 015396 183 LIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESAS 261 (407)
Q Consensus 183 ~~~~~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 261 (407)
..+...+...+....++... ..+|+....+.++++++..+. .+-.+|...+....++..
T Consensus 162 ~~l~~~~~~plv~~~g~~~~---------~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~----------- 221 (467)
T COG2211 162 GLLVAVLFPPLVKLFGGGDK---------ALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTGV----------- 221 (467)
T ss_pred HHHHHHHHHHHHHHhCCCcc---------hhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCcccc-----------
Confidence 88777777666653222111 335665556666666655443 444566554222111100
Q ss_pred hhhhhhhcccccccccccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHH
Q 015396 262 AEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQL 341 (407)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~ 341 (407)
+.+.......+++|++++..++...+.........+...+|.+.. +|.+.............+.+++.
T Consensus 222 ------~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~-----lg~~~l~~~~~~~~~~~~~l~~~- 289 (467)
T COG2211 222 ------KLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYV-----LGDPELFAYLLLLASGAGLLIGL- 289 (467)
T ss_pred ------cccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEE-----cCChHHHHHHHHHHHHHHHHHHH-
Confidence 001112334678999999988877777777777777777777665 67777777777777666666655
Q ss_pred hHHHHHHHHhchhHHHHHHHHHHHHHHhhhhHHH
Q 015396 342 SLYPFLERILGPIMVARIAGVLTIPLLTSYPYIA 375 (407)
Q Consensus 342 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (407)
++.+++.+|+|+|++..++.++..++.+.+.+..
T Consensus 290 ~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~ 323 (467)
T COG2211 290 ILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTP 323 (467)
T ss_pred HhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhc
Confidence 5889999999999999999999999888877766
No 110
>PRK11462 putative transporter; Provisional
Probab=99.70 E-value=1.3e-14 Score=138.04 Aligned_cols=283 Identities=14% Similarity=0.042 Sum_probs=175.8
Q ss_pred CchHHHHHHHHHHHHhhhhhhchhhhHH-HHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccc----cCCh
Q 015396 38 LPITELFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR----YGRK 112 (407)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr----~Grr 112 (407)
.++++.+.-.+..+...+.......++. ++.+.+|+++.. +|.+..+.-+--++..|+.|.++|| +|||
T Consensus 6 l~~~~k~~Yg~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~------~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~ 79 (460)
T PRK11462 6 LSVKEKIGYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGF------VGTMFLVARALDAISDPCMGLLADRTRSRWGKF 79 (460)
T ss_pred ccHhHHHhhccchhhhhHHHHHHHHHHHHHHHHhhCCCHHH------HHHHHHHHHHHHHHHhhhheehhccCCCCCCCc
Confidence 3444444333444444554555555554 667888999998 9999999999999999999999995 7886
Q ss_pred HH-HHHHHHHHHHHHHHhhccch------HHHHHHHHHHHhhhccchhH-HHHHHhhhcc-ccchhhhhHHHHHHHHHHH
Q 015396 113 PV-IIMGTASVVIFNTLFGLSVN------FWMAVLTRFLLGSLNGLLGP-IKAYACEIFR-EEHQALGLSTVSTAWGIGL 183 (407)
Q Consensus 113 ~~-~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~g~~~~-~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~ 183 (407)
|. ++++.+..+++.+++...++ ...+.+..++..++...... -.++.+|..+ +++|.+..++...+..+|.
T Consensus 80 rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~ 159 (460)
T PRK11462 80 RPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGG 159 (460)
T ss_pred chhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHH
Confidence 55 55666777777665544332 34555566666766555444 4888899887 7899999999999999998
Q ss_pred HHHHHhhhhhcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHH-HhccccCCCCCCCCcchhhhhhhhhhhchh
Q 015396 184 IIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASA 262 (407)
Q Consensus 184 ~~~~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 262 (407)
.+++.+...+.+..++... ..+|+....+.+++.++.... ....+|.++..+++.
T Consensus 160 ~~~~~~~~plv~~~g~~~~---------~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~~~~~~--------------- 215 (460)
T PRK11462 160 MLSTVLMMPLVNLIGGDNK---------PLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAPPTTT--------------- 215 (460)
T ss_pred HHHHHHHHHHHHHhCCCch---------hhhHHHHHHHHHHHHHHHHHHHHhcceeccCCCccCC---------------
Confidence 8888777665542111000 234555445555555444333 333455332111100
Q ss_pred hhhhhhcccccccccccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHh
Q 015396 263 EVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLS 342 (407)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~ 342 (407)
+.....+..++|+.++......++.............+|.... .| +....+.+.....++.+++. +
T Consensus 216 -------~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~-----~g-~~~~~~~~l~~~~i~~iig~-~ 281 (460)
T PRK11462 216 -------SMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWI-----LG-TPEVFVAFLTTYCVGNLIGS-A 281 (460)
T ss_pred -------CHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhh-----cC-ChHHHHHHHHHHHHHHHHHH-H
Confidence 0112345677888887776555555544444444444443332 23 23334556666777777776 4
Q ss_pred HHHHHHHHhchhHHHHHHHHHH
Q 015396 343 LYPFLERILGPIMVARIAGVLT 364 (407)
Q Consensus 343 ~~~~l~~~~~~~~~~~~~~~~~ 364 (407)
+.+++.||+++|+....+....
T Consensus 282 l~~~l~~r~gkk~~~~~~~~~~ 303 (460)
T PRK11462 282 LAKPLTDWKCKVTIFWWTNALL 303 (460)
T ss_pred HHHHHHHHhChHHHHHHHHHHH
Confidence 8899999999988866544433
No 111
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.70 E-value=1e-14 Score=130.57 Aligned_cols=291 Identities=12% Similarity=0.084 Sum_probs=193.7
Q ss_pred hHHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHH
Q 015396 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (407)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (407)
|..++...+..+.+.+....+.+...+...-+| +.+. .-|...+|++.+....+++-|+.||+|-|...+++.
T Consensus 44 W~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~------~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt 116 (480)
T KOG2563|consen 44 WVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSA------ADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGT 116 (480)
T ss_pred hHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHH------HHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHH
Confidence 333445556666666777777777777778888 5555 789999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccc------hHH--HHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhh
Q 015396 120 ASVVIFNTLFGLSV------NFW--MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (407)
Q Consensus 120 ~~~~~~~~~~~~~~------~~~--~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 190 (407)
.+.+++..+-..+. .++ ....+..+.+.++-..... ..+..-||++++|..+..+-.++..+|.++|.++.
T Consensus 117 ~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llp 196 (480)
T KOG2563|consen 117 VLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLP 196 (480)
T ss_pred HHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhcc
Confidence 99999998776643 344 5556677777776665555 56677799999999999999999999999999999
Q ss_pred hhhcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHH-HHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhc
Q 015396 191 GFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEG 269 (407)
Q Consensus 191 ~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (407)
..+..+..+.. ...| .....++...++..+.+ +..+..++.|+.........+. ..
T Consensus 197 pilV~~~~~~~-~~~~-------~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~~---------------~~ 253 (480)
T KOG2563|consen 197 PILVPSSKDSE-DNSW-------LFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAALQ---------------DA 253 (480)
T ss_pred ceecCCCCCcc-hhHH-------HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhhh---------------cC
Confidence 99987542111 1111 11112333333333322 2233334444333222111100 11
Q ss_pred ccccccccccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHH
Q 015396 270 REATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLER 349 (407)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 349 (407)
+-.+..++.++|+++....+++.+......+..+.+-.-+.. .|++...+|+......+++++++. +.+.+.|
T Consensus 254 ~f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~------sgY~~~~aG~ig~l~iv~Gmlga~-~~gii~D 326 (480)
T KOG2563|consen 254 SFPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCP------SGYEGVFAGYIGALMIVAGMLGAL-ASGIIAD 326 (480)
T ss_pred cHHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhcccc------ccCCccccchhHHHHHHHHHHHHH-HHHhhhh
Confidence 134567889999999888887777555544444333222221 466778889999999999999986 6777777
Q ss_pred Hhch-hHHHHHHHHHHHHH
Q 015396 350 ILGP-IMVARIAGVLTIPL 367 (407)
Q Consensus 350 ~~~~-~~~~~~~~~~~~~~ 367 (407)
|.+. |..+.+......++
T Consensus 327 ktk~fk~~~~v~~~~~~v~ 345 (480)
T KOG2563|consen 327 KTKKFKLTTLVLYLFALVG 345 (480)
T ss_pred hhhhHHHHHHHHHHHHHHH
Confidence 7654 44444444444444
No 112
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.69 E-value=5.3e-17 Score=135.89 Aligned_cols=289 Identities=13% Similarity=0.125 Sum_probs=190.7
Q ss_pred HHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccc-cCChHHHHHHH
Q 015396 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVIIMGT 119 (407)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr-~Grr~~~~~~~ 119 (407)
..+..+++..|-+++.+........++..+.+++.++ ..++.+.|.....+.+.+.|++.|| +|-|..-++-+
T Consensus 44 m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~ak------ftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~ 117 (459)
T KOG4686|consen 44 MALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAK------FTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILC 117 (459)
T ss_pred HHHHHHHHhcccceeecCCchhhhhhhhcccccceee------eeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHH
Confidence 3444566777777788888888888999999999988 8899999999999999999999996 57676655555
Q ss_pred HHHHHHHHHhhc---cchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 120 ASVVIFNTLFGL---SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 120 ~~~~~~~~~~~~---~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
+...++.++++. .+.+|.+.++|++.|+|.-...++ ..+...|+..|+.+.++|+......+|..+--.+.+++.+
T Consensus 118 ~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~ 197 (459)
T KOG4686|consen 118 IFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYD 197 (459)
T ss_pred HHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHH
Confidence 566667666654 688999999999999987777776 9999999999999999999999999999988777777776
Q ss_pred CCCCCCCcccccccccCCCChhHH-HHHHHHHHHHHHHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccccc
Q 015396 196 PAEKYPNLFSSESLFGKFPYFLPC-LCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATP 274 (407)
Q Consensus 196 ~~~~~~~~~gw~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (407)
..+. .++-.. -...|.+..+ .......++.....-+..+..+....+ ++... .+..+..
T Consensus 198 ~~~~---~~~~~g-hT~LG~~l~~~~~tc~~slical~lg~~D~rAerilh~-------------e~g~~---Ge~pkLt 257 (459)
T KOG4686|consen 198 TMGR---MFPGVG-HTLLGLWLCFEVKTCKQSLICALSLGLSDDRAERILHL-------------EEGFL---GEEPKLT 257 (459)
T ss_pred HHHH---hcccch-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhh-------------hcCcc---cCCcccc
Confidence 3211 000000 0000000000 001111111111111111110000000 00000 0011112
Q ss_pred cccccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchh
Q 015396 275 KKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI 354 (407)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 354 (407)
...-+ .|++|...+..+++.....-+.+.-+.+.++. +|+|+..++-+.+.......+.+ ++.+.++||.|++
T Consensus 258 dv~~f-~ppfw~~~iicv~yyva~fPFi~lg~~fF~~r-----fGlS~~~a~~i~s~vy~Isav~s-pvfg~i~Dk~G~n 330 (459)
T KOG4686|consen 258 DVNTF-YPPFWVLVIICVLYYVAWFPFITLGPMFFQKR-----FGLSAVSAGNILSTVYGISAVLS-PVFGAISDKYGFN 330 (459)
T ss_pred ccccc-CccHHHHHHHHHHHHHHHHHHhhhhHHHHHHh-----hCCChhhccchhhhhhhhhhhhh-hhHHHhHhhhcce
Confidence 22222 37788888888888877777776667666655 99999999988887777777666 4889999999988
Q ss_pred HHHHHHHH
Q 015396 355 MVARIAGV 362 (407)
Q Consensus 355 ~~~~~~~~ 362 (407)
...+.+..
T Consensus 331 ~~wv~~a~ 338 (459)
T KOG4686|consen 331 LWWVASAC 338 (459)
T ss_pred ehhHHHHH
Confidence 66655443
No 113
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.68 E-value=2.6e-14 Score=133.38 Aligned_cols=329 Identities=19% Similarity=0.274 Sum_probs=209.9
Q ss_pred HHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHH
Q 015396 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (407)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~ 124 (407)
...+-.+...+......+..+.....++.+..+. .....+.-.....+...+.++..|.++||+|||..+....+...+
T Consensus 26 ~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~-~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l 104 (463)
T KOG2816|consen 26 LLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLE-NGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTIL 104 (463)
T ss_pred HHHHHHHHHHhcCcchhhhhhhhhcccccCccch-hhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHH
Confidence 4445555555555555666666666655444331 111133333233677789999999999999999999999998888
Q ss_pred HHHHhhccchHHHHHHHHHHHhhhccc---hhHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCC
Q 015396 125 FNTLFGLSVNFWMAVLTRFLLGSLNGL---LGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYP 201 (407)
Q Consensus 125 ~~~~~~~~~~~~~l~~~r~l~G~~~g~---~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~ 201 (407)
..+...+.. |++++ +.|+..+. .....++++|....++|....++.+.....+..++|.+++.+..
T Consensus 105 ~~~~~~~~~--~~~~~---~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~------ 173 (463)
T KOG2816|consen 105 PALCLLFQG--YWFFL---LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVK------ 173 (463)
T ss_pred hHHHHHHHH--HHHhh---hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHH------
Confidence 887776655 33333 55554333 33459999999999999999999999999999999999999998
Q ss_pred CcccccccccCCCChhHHHHHHHHHHHHHH-HHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccccccccccc
Q 015396 202 NLFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLK 280 (407)
Q Consensus 202 ~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (407)
..+...++.+..+..++..+ ..+++||+....+.+...... ....... .+...+........-.
T Consensus 174 ----------~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~ 238 (463)
T KOG2816|consen 174 ----------FLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRE----LTPGSLD-SSHVADAFQSLTKVGP 238 (463)
T ss_pred ----------hcCchHHHHHHHHHHHHHHHHHhhccccccCccccccccccc----cCCCccc-chhhhhhhhhhcccCC
Confidence 45566677777777776554 467789887655443100000 0000000 0001111112222223
Q ss_pred cchhHHHHHHHHHHhhccch-hhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHH
Q 015396 281 NWPLMSSIIVYCVFSLHDMA-YSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARI 359 (407)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 359 (407)
+|..+..++..++....... .....+.|+..+ ++++..+.+.+.+..++...+++.+..+.+.+.++.++....
T Consensus 239 ~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~-----f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~l 313 (463)
T KOG2816|consen 239 DRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAK-----FGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISL 313 (463)
T ss_pred CccchHHHHHHHHHHHHHhcCceeEEEEEEeee-----cCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhH
Confidence 34444444444443333222 221335555555 899999999999999999999999888899999999998888
Q ss_pred HHHHHHHHHhhhhHHHhhhhhhhHhhhh-----hhHHHHHHHhhcCCCCCC
Q 015396 360 AGVLTIPLLTSYPYIAMLSGFGLAFLLN-----CASVVKNLLSSSGPGSKR 405 (407)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~p~~~r 405 (407)
|...-.+....+.+.......+...++. ......+..+....++.+
T Consensus 314 Gl~~~~~~~~~~af~~~~w~~~~~~v~~~~~~~~~pa~~s~~s~~v~~~e~ 364 (463)
T KOG2816|consen 314 GLLSEFLQLLLFAFATETWMMFAAGVVVALAGIVFPAIRAFASILVSPEEQ 364 (463)
T ss_pred HHHHHHHHHHHHHHhccchhhhHHHHHHHhhcchhHHHHhHHHhhcccccc
Confidence 9888888888887776555433322222 222334445555444443
No 114
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.67 E-value=6.3e-15 Score=132.51 Aligned_cols=216 Identities=14% Similarity=0.095 Sum_probs=152.7
Q ss_pred ccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCc-ccccc
Q 015396 131 LSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL-FSSES 208 (407)
Q Consensus 131 ~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~-~gw~~ 208 (407)
...+++.++++-++.|.|.+...+. +.++++..|+|++.+.+++.+..+++|..++|.+++.+.......... .+-..
T Consensus 6 ~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~ 85 (310)
T TIGR01272 6 SQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATAN 85 (310)
T ss_pred HhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhh
Confidence 4578999999999999999998885 999999999999999999999999999999999999988521100000 00000
Q ss_pred cccCCCChhHHHHHHHHHHHHHHHHhcc--ccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccccccccccccchhHH
Q 015396 209 LFGKFPYFLPCLCISLFAFGVTIAAFWL--PETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMS 286 (407)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (407)
.. .+.|+.++++.+...++..+.+.+. ||.++++. ++ .. + ++....++.+++|.++.
T Consensus 86 ~~-~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~~--~~--~~---------------~-~~~~~~~~~~~~~~~~l 144 (310)
T TIGR01272 86 AE-AAKVHTPYLLLAGALAVLAIIFAFLPLPELQEADV--AR--VS---------------S-GDTTQKTSAFQFTHLVL 144 (310)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcccc--cc--cc---------------c-ccccchhhHHhhHHHHH
Confidence 00 1346666675555544433333333 43221110 00 00 0 00011234677888888
Q ss_pred HHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHHH
Q 015396 287 SIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIP 366 (407)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 366 (407)
..+..+++.....+...+.+.|+.+. ..+|+++.+.+...+....+..+++. +++++.||+++++.+.++..+..+
T Consensus 145 ~~~~~f~yvg~e~~~~~w~~~yl~~~---~~~g~s~~~a~~~~s~~~~~~~iGr~-~~~~l~~r~g~~~~l~~~~~l~~~ 220 (310)
T TIGR01272 145 GALGIFVYVGAEVSAGSFLVNFLSDP---HALGLPEDQAAHFTAYTWGGAMVGRF-IGSAVMPMISQGRYLAFNAFLAVL 220 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc---ccCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCHHHHHHHHHHHHHH
Confidence 88888888889999999999999643 12688999999999999999999985 999999999999988888777766
Q ss_pred HHhhh
Q 015396 367 LLTSY 371 (407)
Q Consensus 367 ~~~~~ 371 (407)
..++.
T Consensus 221 ~~~l~ 225 (310)
T TIGR01272 221 LSIGA 225 (310)
T ss_pred HHHHH
Confidence 65444
No 115
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.67 E-value=6.4e-18 Score=161.37 Aligned_cols=313 Identities=16% Similarity=0.206 Sum_probs=2.9
Q ss_pred HHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHH
Q 015396 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (407)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~ 124 (407)
.+++..+...+..+.....++.+.++|+++.++ .|++.+.+-++..+..++..++.+|..|-|.+-++.++.++
T Consensus 7 ~~~~~~~~q~~~~g~~~~~lttiErRF~l~S~~------~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~ 80 (539)
T PF03137_consen 7 FLCLLGLFQMMVSGYVNSSLTTIERRFGLSSSQ------SGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGL 80 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHH
Confidence 445555666666667777888999999999999 99999999999999999999999998888899999999999
Q ss_pred HHHHhhccc--------------------------------------------------hHHHHHHHHHHHhhhccchhH
Q 015396 125 FNTLFGLSV--------------------------------------------------NFWMAVLTRFLLGSLNGLLGP 154 (407)
Q Consensus 125 ~~~~~~~~~--------------------------------------------------~~~~l~~~r~l~G~~~g~~~~ 154 (407)
+++++++-+ -+..++++.++.|+|.....+
T Consensus 81 g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~t 160 (539)
T PF03137_consen 81 GSLLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYT 160 (539)
T ss_dssp -----------------------------------------------------------------------SSS------
T ss_pred HHHHHhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCcc
Confidence 988876410 124578889999999999888
Q ss_pred H-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCC------cccc-cccccCCCChhHHHHHHHHH
Q 015396 155 I-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPN------LFSS-ESLFGKFPYFLPCLCISLFA 226 (407)
Q Consensus 155 ~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~------~~gw-~~~~~~~~~~~~~~~~~~~~ 226 (407)
. .+|+-|..++++-+..+|+......+|.++|-++++.+....-++.. .... +.-| -..||..+++.++..
T Consensus 161 LG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~W-vGAWWLGfli~g~~~ 239 (539)
T PF03137_consen 161 LGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRW-VGAWWLGFLICGILL 239 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccH-HHHHHHHHHHHHHHH
Confidence 6 99999999999999999999999999999999999988864322111 0111 1111 345888888888888
Q ss_pred HHHHHHHhccccCCCCCCCCcchhh--hhh-hhhhhc-hhhh------hhhhcccccccccccccchhHHHHHHHHHHhh
Q 015396 227 FGVTIAAFWLPETLHRHNDDDDSCD--VSY-DALESA-SAEV------KEEEGREATPKKSLLKNWPLMSSIIVYCVFSL 296 (407)
Q Consensus 227 ~~~~~~~~~~~e~~~~~~~~~~~~~--~~~-~~~~~~-~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (407)
++..+.++++|+..+...+.+++.+ +.+ ++.+.. .++. .+..++-+...+.+++||.+....+.......
T Consensus 240 ~l~aipl~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~ 319 (539)
T PF03137_consen 240 FLSAIPLFFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESF 319 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHH
Confidence 7777777777765444311111111 000 000000 0011 11123345677889999999999999999999
Q ss_pred ccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhc--hhHHHHHHHHHHHHHHh
Q 015396 297 HDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG--PIMVARIAGVLTIPLLT 369 (407)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~ 369 (407)
...++.++.|.|++.. ++.++.+++++.....+.....+.++++++.+|++ .|..+....+...+..+
T Consensus 320 ~~~G~~tF~pKylE~Q-----F~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~ 389 (539)
T PF03137_consen 320 IVSGFATFLPKYLESQ-----FGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVI 389 (539)
T ss_dssp ---------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHH-----hCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHH
Confidence 9999999999999887 89999999998888777666666679999999875 45555555544444443
No 116
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.65 E-value=7.8e-15 Score=141.05 Aligned_cols=174 Identities=15% Similarity=0.241 Sum_probs=126.1
Q ss_pred HHhhhhhhchhhhHHHHH-HhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHH-
Q 015396 51 LCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTL- 128 (407)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~- 128 (407)
+...........++|.+. +++|.+..+ .++..+...++..++.+..|+++||+|||+.+..+.++..++.+.
T Consensus 260 ~~~~~~~~~~~~~~p~~l~~~~g~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~ 333 (490)
T PRK10642 260 IATNVTYYMLLTYMPSYLSHNLHYSEDH------GVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPA 333 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 334445555666778665 567888776 777788888999999999999999999999988877654433322
Q ss_pred --hhccchHHHHHHHHHHHhhhccchhH-HHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCccc
Q 015396 129 --FGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFS 205 (407)
Q Consensus 129 --~~~~~~~~~l~~~r~l~G~~~g~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~g 205 (407)
...+++...+++++++.|++.+.... ...++.|.+|++.|+++++.......+++.++|.+.+++.+.
T Consensus 334 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~--------- 404 (490)
T PRK10642 334 FILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVES--------- 404 (490)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH---------
Confidence 22345677788889998887655444 477888999999999999975444556678899999988762
Q ss_pred ccccccCCCChhHHHHHHHHHHHHHHHHhccccCCCCCCC
Q 015396 206 SESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHND 245 (407)
Q Consensus 206 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 245 (407)
...|+.++++..+.+++.++..+++||++++..+
T Consensus 405 ------~~~~~~~~~~~~~~~~i~~~~~~~~pes~~~~~~ 438 (490)
T PRK10642 405 ------TQNLMMPAYYLMVVAVIGLITGVTMKETANRPLK 438 (490)
T ss_pred ------hCCchHHHHHHHHHHHHHHHHHHHhccccCCCCC
Confidence 1224555566666666666666778999887543
No 117
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.64 E-value=2.1e-15 Score=144.26 Aligned_cols=311 Identities=16% Similarity=0.190 Sum_probs=237.4
Q ss_pred HHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHH
Q 015396 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (407)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~ 124 (407)
.+.+..+...+....+...+..+-+.|+++.++ .|++.+.+-++..+...+..++.-|.-|-|.+-++.++.++
T Consensus 101 ~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~------sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~l 174 (735)
T KOG3626|consen 101 LLSLAAFAQGLYVGYFNSVITTIERRFKISSSQ------SGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGL 174 (735)
T ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCc------ceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHH
Confidence 455666777777777778888999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHhhccc-------------------------------------------------h--HH-HHHHHHHHHhhhccch
Q 015396 125 FNTLFGLSV-------------------------------------------------N--FW-MAVLTRFLLGSLNGLL 152 (407)
Q Consensus 125 ~~~~~~~~~-------------------------------------------------~--~~-~l~~~r~l~G~~~g~~ 152 (407)
+++++++-+ + +| .++++.++.|+|....
T Consensus 175 gsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi 254 (735)
T KOG3626|consen 175 GSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPI 254 (735)
T ss_pred HHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCC
Confidence 999876521 0 22 5677789999999998
Q ss_pred hHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCC-CC-----cccccccccCCCChhHHHHHHHH
Q 015396 153 GPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY-PN-----LFSSESLFGKFPYFLPCLCISLF 225 (407)
Q Consensus 153 ~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~-~~-----~~gw~~~~~~~~~~~~~~~~~~~ 225 (407)
.+. .+|+-|...+++-+..+|+......+|.++|-++++++.....++ .. ..+-|| --.||.-|++.+.+
T Consensus 255 ~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrW---IGAWWlGFLi~g~~ 331 (735)
T KOG3626|consen 255 FTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRW---IGAWWLGFLICGAL 331 (735)
T ss_pred ccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcch---hhHHHHHHHHHHHH
Confidence 886 999999999999999999999999999999999999998644332 11 112233 34588889999998
Q ss_pred HHHHHHHHhccccCCCCCCCCcchhhhhhhhhhhc--hhhh--hhhhcccccccccccccchhHHHHHHHHHHhhccchh
Q 015396 226 AFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESA--SAEV--KEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAY 301 (407)
Q Consensus 226 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (407)
.++..+.++++|+..++..++.+..+......++. .++. .+..++-++..+++++||.+...++...+......++
T Consensus 332 ~~~~a~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~ 411 (735)
T KOG3626|consen 332 LLFSAVPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGY 411 (735)
T ss_pred HHHHHHHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhH
Confidence 88888888888877665433211111100000000 0000 0111234556788999999999999999999999999
Q ss_pred hhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhc--hhHHHHHHHHHHHHHHh
Q 015396 302 SEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG--PIMVARIAGVLTIPLLT 369 (407)
Q Consensus 302 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~ 369 (407)
.+++|-|++.. +|.++..+..+....++.....+++++|++.+|+. .|.......+...+.++
T Consensus 412 ~tFlPKyLE~Q-----fg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l~ 476 (735)
T KOG3626|consen 412 ITFLPKYLETQ-----FGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSLL 476 (735)
T ss_pred HHhhHHHHHHH-----cCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHHH
Confidence 99999999887 99999999999988888888888889999999875 44444444444444433
No 118
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.63 E-value=8.7e-15 Score=144.25 Aligned_cols=140 Identities=14% Similarity=0.105 Sum_probs=117.1
Q ss_pred HHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhhccchhH-HHHHHhhhc
Q 015396 85 GYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIF 163 (407)
Q Consensus 85 g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~-~~~~~~~~~ 163 (407)
.+...+..++.+++.++.|+++||+|||++++++.++.++++++.++.++.+.+++.+++.|++.+...+ ..++++|++
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~ 677 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELY 677 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3445667788999999999999999999999999999999999988888888888888888887666555 499999999
Q ss_pred cccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhccccCCC
Q 015396 164 REEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLH 241 (407)
Q Consensus 164 ~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 241 (407)
|++.|++++|+.+....+|.++||++++.+.+ . ....++++.++..++..++..++||+..
T Consensus 678 Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~----------------~-~~~~pf~i~a~~lll~~ll~~~LPET~~ 738 (742)
T TIGR01299 678 PSDKRATAFGFLNALCKAAAVLGILIFGSFVG----------------I-TKAAPILFASAALACGGLLALKLPDTRG 738 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------h-hhHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 99999999999999999999999999998875 1 2345667777766666666667788654
No 119
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.62 E-value=3.4e-13 Score=118.78 Aligned_cols=275 Identities=15% Similarity=0.106 Sum_probs=175.5
Q ss_pred HHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHh
Q 015396 50 VLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF 129 (407)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~ 129 (407)
+.+......+..|..-.+.+++|.++.+ ++.+....+....+..++.|.++||+|||+.-+..+++.+++++.
T Consensus 43 Y~La~~aDWLQGpY~Y~LY~~yg~~~~q------Ia~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~- 115 (354)
T PF05631_consen 43 YLLAMAADWLQGPYLYALYESYGFSEHQ------IAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLT- 115 (354)
T ss_pred HHHHHHHHHhhcchhHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH-
Confidence 3444556667778887777899999999 999999999999999999999999999999999999999999964
Q ss_pred hccchHHHHHHHHHHHhhhccchhHH--HHHHhhhccc----cchhhhhHHHH-HHHHHHHHHHHHhhhhhcCCCCCCCC
Q 015396 130 GLSVNFWMAVLTRFLLGSLNGLLGPI--KAYACEIFRE----EHQALGLSTVS-TAWGIGLIIGPALGGFLAQPAEKYPN 202 (407)
Q Consensus 130 ~~~~~~~~l~~~r~l~G~~~g~~~~~--~~~~~~~~~~----~~r~~~~~~~~-~~~~~g~~~~~~~~~~l~~~~~~~~~ 202 (407)
-..++++.++++|++.|++......+ .-++.|.-.. +..+..++... ...++-.+++.+++.++.+..
T Consensus 116 k~~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~----- 190 (354)
T PF05631_consen 116 KHSSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWF----- 190 (354)
T ss_pred HhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHh-----
Confidence 45688999999999999998886664 4466776432 22233333222 223333445555555555511
Q ss_pred cccccccccCCCChhHHHHHHHHHHHHHHH-HhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhccccccccccccc
Q 015396 203 LFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKN 281 (407)
Q Consensus 203 ~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (407)
..+...|+....+..++..+. ....+|+.....++.+..+. -...++.+.+|
T Consensus 191 ---------~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~~~~~~~------------------~~~a~~~i~~d 243 (354)
T PF05631_consen 191 ---------GFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSSSSSLSGS------------------FREAWRAILSD 243 (354)
T ss_pred ---------CCCCcchHHHHHHHHHHHHHHHHhcccccCCCcccccchHHH------------------HHHHHHHHHcC
Confidence 223355666666655554433 33446655432221111111 11245667788
Q ss_pred chhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHH
Q 015396 282 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAG 361 (407)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 361 (407)
|+++.+.++..++-.....+.... .|.... .+ ...-.|++++.+.+..++|+.+....+.++......+....
T Consensus 244 ~ril~LG~~qslFE~smy~FVflW-----tPaL~~-~~-~~~P~GlIFssFM~a~MlGS~lf~~l~s~~~~~e~~l~~v~ 316 (354)
T PF05631_consen 244 PRILLLGLIQSLFEGSMYLFVFLW-----TPALDP-DD-EELPLGLIFSSFMVAMMLGSSLFSRLLSKSLRPESLLRYVF 316 (354)
T ss_pred chhHHHHHHHHHHHHHHHHheeee-----eceecC-CC-CCCCchHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 999888888888776654443222 222111 11 12347899999999999998633344555555555555555
Q ss_pred HHHHHHHhh
Q 015396 362 VLTIPLLTS 370 (407)
Q Consensus 362 ~~~~~~~~~ 370 (407)
.+..+++..
T Consensus 317 ~~aa~~l~~ 325 (354)
T PF05631_consen 317 AVAAVSLAI 325 (354)
T ss_pred HHHHHHHHH
Confidence 555444443
No 120
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.62 E-value=1.5e-12 Score=122.97 Aligned_cols=299 Identities=17% Similarity=0.132 Sum_probs=196.5
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHH-HHHHHHHHHHHhhcc-chHHHH-HHHHHHHhhhccchhHH-H
Q 015396 81 GSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM-GTASVVIFNTLFGLS-VNFWMA-VLTRFLLGSLNGLLGPI-K 156 (407)
Q Consensus 81 ~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~-~~~~~~~~~~~~~~~-~~~~~l-~~~r~l~G~~~g~~~~~-~ 156 (407)
+.+.++..++..+..++..|+.|.++|+-|+||.++. ...+..+++..+.+. ++.|.+ .+..++.-++.+...+. .
T Consensus 69 ~s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyn 148 (477)
T PF11700_consen 69 SSLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYN 148 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3446788889999999999999999999998776554 445555555555553 443433 33334444565566665 9
Q ss_pred HHHhhhccccch--------------------------hhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcccccccc
Q 015396 157 AYACEIFREEHQ--------------------------ALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLF 210 (407)
Q Consensus 157 ~~~~~~~~~~~r--------------------------~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~~~ 210 (407)
+++.|..+++++ ++..+.-.....+|+.+.-.+.-.+....++. . =
T Consensus 149 a~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~-------~-~ 220 (477)
T PF11700_consen 149 AYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGST-------A-S 220 (477)
T ss_pred HHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCc-------c-c
Confidence 999999998888 89888888888888888777766655422111 0 0
Q ss_pred cCCCChhHHHHHHHHHHH-HHHHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccccccccccccchhHHHHH
Q 015396 211 GKFPYFLPCLCISLFAFG-VTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSII 289 (407)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (407)
..++.|..+.+.++..++ .+...+++||.|+.+..++...... .. -++-....+++.+.|.+...++
T Consensus 221 ~~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~-~g-----------~~~l~~t~k~~~~~~~~~~fLi 288 (477)
T PF11700_consen 221 NTWAIRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLR-FG-----------FKRLWRTFKEIRKLRQLFLFLI 288 (477)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHH-HH-----------HHHHHHHHHHHHhChHHHHHHH
Confidence 033457777777777655 4445667888776322221111000 00 0011224566677888999999
Q ss_pred HHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchh--HHHHHHHHHHHHH
Q 015396 290 VYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI--MVARIAGVLTIPL 367 (407)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~ 367 (407)
.++++.-...+...+...|..+. +|++..+...+.....+.++++.+ +.+++.||+|.| +.+.++..+..+.
T Consensus 289 a~~l~~dg~~ti~~~~~i~a~~~-----lg~s~~~l~~~~l~~~i~a~~Ga~-~~g~l~~r~g~k~~~~l~~~l~~~~~i 362 (477)
T PF11700_consen 289 AYFLYSDGVNTIISFAGIYATEV-----LGMSTTQLIVFGLVVQIVAIIGAL-LFGWLQDRFGPKTKRTLLISLILWIII 362 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-----cCcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCchhHHHHHHHHHHHHH
Confidence 99998888888888888888876 899999999999999999999995 889999999998 7766666555332
Q ss_pred HhhhhH--------HHhhhhhhhH-----hhh-hhhHHHHHHHhhcCCCCCC
Q 015396 368 LTSYPY--------IAMLSGFGLA-----FLL-NCASVVKNLLSSSGPGSKR 405 (407)
Q Consensus 368 ~~~~~~--------~~~~~~~~~~-----~~~-~~~~~~~~~~~~~~p~~~r 405 (407)
.+.-.+ ......++.. +.. ..-+..+++++++.|+...
T Consensus 363 ~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e 414 (477)
T PF11700_consen 363 PLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGRE 414 (477)
T ss_pred HHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchh
Confidence 222111 1111112211 111 1224567889999998764
No 121
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.62 E-value=7e-15 Score=138.25 Aligned_cols=183 Identities=12% Similarity=0.125 Sum_probs=131.2
Q ss_pred HHHhhhhhhchhhhHHHHHHhhccccccc--chhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHH
Q 015396 50 VLCTALPISSLFPFLYFMIKDFQIAKREE--DIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNT 127 (407)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~ 127 (407)
.++............+.+.++.|.++... ......+...++..++..++.++.|+++||+|||+++..+.++.+++..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~ 296 (418)
T TIGR00889 217 SMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFG 296 (418)
T ss_pred HHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 33333333344456676777777554210 0001178999999999999999999999999999999999999888876
Q ss_pred Hhhccc----hHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHH-HHHHHHHHHHHHhhhhhcCCCCCCC
Q 015396 128 LFGLSV----NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVS-TAWGIGLIIGPALGGFLAQPAEKYP 201 (407)
Q Consensus 128 ~~~~~~----~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~l~~~~~~~~ 201 (407)
+..... +++.+++.+++.|++.+...+. ..++.|++|+++|++++++.+ ...++|..+||+++|++.+..++..
T Consensus 297 l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~ 376 (418)
T TIGR00889 297 FFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYG 376 (418)
T ss_pred HHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcccc
Confidence 666532 2466778899999998887775 889999999999999999997 6789999999999999998322110
Q ss_pred CcccccccccCCCChhHHHHHHHHHHH-HHHHHhccccCCCC
Q 015396 202 NLFSSESLFGKFPYFLPCLCISLFAFG-VTIAAFWLPETLHR 242 (407)
Q Consensus 202 ~~~gw~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~ 242 (407)
. ++|+..+.+.++..++ .++..+++||+.+.
T Consensus 377 -~---------~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~~ 408 (418)
T TIGR00889 377 -T---------FDWQTMWLFFAGYIAILAVLFMIFFKYSHNA 408 (418)
T ss_pred -C---------CchHHHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 1 2345544666666554 44455667766443
No 122
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.61 E-value=3.8e-14 Score=132.54 Aligned_cols=159 Identities=15% Similarity=0.193 Sum_probs=124.4
Q ss_pred hhchhhhHHHH-HHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhccchH
Q 015396 57 ISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNF 135 (407)
Q Consensus 57 ~~~~~~~~~~~-~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~ 135 (407)
...+....|.+ .+++|.++.+ .+++.+...++..++.++.|+++||+|||+.+..+.+...+........++.
T Consensus 232 ~~~~~~~~p~~l~~~~~~~~~~------~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (393)
T PRK15011 232 NSLYIINMPLFIINELHLPEKL------AGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSP 305 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 34445566744 4678988887 8888888778888899999999999999998887766666555555556788
Q ss_pred HHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcccccccccCCC
Q 015396 136 WMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFP 214 (407)
Q Consensus 136 ~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~~~~~~~ 214 (407)
+.+++.+++.+++.|...+. ..+..|.+|+ +|++++++.+....+|..++|.++|.+.+ .++
T Consensus 306 ~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~----------------~~g 368 (393)
T PRK15011 306 AILLGLQLLNAIYIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAE----------------IWN 368 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHH----------------Hhh
Confidence 88888898888877665554 7778898885 59999999988899999999999999998 445
Q ss_pred ChhHHHHHHHHHHHHHHHHhcccc
Q 015396 215 YFLPCLCISLFAFGVTIAAFWLPE 238 (407)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~e 238 (407)
|+.++.+.++..++.++..++.||
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 369 YHAVFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhcC
Confidence 566667777777777777666664
No 123
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.58 E-value=1.1e-14 Score=115.12 Aligned_cols=135 Identities=33% Similarity=0.577 Sum_probs=112.5
Q ss_pred HHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhcccc
Q 015396 88 GSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE 166 (407)
Q Consensus 88 ~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~ 166 (407)
.+.+.++..+++++.|++.||+|||+.+..+.....++.+.....++.+.+.+.+++.|++.+...+. ..++.|.+|++
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPE 83 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChh
Confidence 34566788899999999999999999999999999999888888899999999999999998887775 89999999999
Q ss_pred chhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHH-Hhcccc
Q 015396 167 HQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPE 238 (407)
Q Consensus 167 ~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e 238 (407)
+|++.+++.+....+|..++|.+++.+.+ ..+|+..+.+.++..++..+. .+..||
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 84 ERGVALGLMSAGIALGPLLGPPLGGVLAQ----------------FLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhHHHHHHHHhHHHHHHHhHHhHHHHhc----------------ccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 99999999999999999999999999987 344555556666655554443 333444
No 124
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.58 E-value=6.6e-14 Score=131.63 Aligned_cols=139 Identities=21% Similarity=0.279 Sum_probs=117.2
Q ss_pred HHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhh
Q 015396 51 LCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG 130 (407)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~ 130 (407)
+.............|.+.++.|.+..+ .+...+...++..++.++.|+++||+|||+.+..+.+...++.++..
T Consensus 230 ~~~~~~~~~~~~~~p~~~~~~g~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~ 303 (406)
T PRK11551 230 FFTLIVLYFLLNWLPSLLVGQGLSRSQ------AGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALA 303 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCChhh------hhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 333334444555678888888999888 99999999999999999999999999999999887777777777777
Q ss_pred ccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 131 LSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 131 ~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
..++.+.+.+..++.|++.+...+. .++..|.+|+++|++++++.+....+|..++|.++|.+.+
T Consensus 304 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~ 369 (406)
T PRK11551 304 AAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLA 369 (406)
T ss_pred hcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhc
Confidence 7778887777778888876555554 8899999999999999999999999999999999999987
No 125
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.58 E-value=8.1e-14 Score=130.71 Aligned_cols=163 Identities=19% Similarity=0.167 Sum_probs=128.6
Q ss_pred hhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhccch
Q 015396 55 LPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVN 134 (407)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~ 134 (407)
+........++.+.++.|. ++ .++..+.+.++..++.++.|++.||+|||+.+..+..+..++.++....++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~--~~------~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (399)
T PRK05122 230 IGFGTIATFITLYYAARGW--DG------AALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPS 301 (399)
T ss_pred HHHHHHHHHHHHHHHHccc--cc------chHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3344455566666666565 23 566677888888999999999999999999999988888888888888888
Q ss_pred HHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcccccccccCC
Q 015396 135 FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKF 213 (407)
Q Consensus 135 ~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~~~~~~ 213 (407)
.+.+++.+++.|++.+...+. .....|.+|+++|+++.++++....+|..++|.+.|.+.+ .+
T Consensus 302 ~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~----------------~~ 365 (399)
T PRK05122 302 PWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVAS----------------WF 365 (399)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------Hc
Confidence 888888899999988776665 7778899999999999999999999999999999999988 44
Q ss_pred CChhHHHHHHHHHHHHHHHHhccccCCC
Q 015396 214 PYFLPCLCISLFAFGVTIAAFWLPETLH 241 (407)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 241 (407)
+|+..+.+.++..++.++..+.++++++
T Consensus 366 g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (399)
T PRK05122 366 GYPSIFLAAALAALLGLALTWLLYRRAP 393 (399)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 5555557777776666665555555433
No 126
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.57 E-value=3.6e-14 Score=131.80 Aligned_cols=139 Identities=13% Similarity=0.016 Sum_probs=113.5
Q ss_pred HHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhh
Q 015396 51 LCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG 130 (407)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~ 130 (407)
+.............+.+.+++|.++.+ .+++.+...++..++.++.|+++||+|||+.+..+.++..++.++..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~ 288 (377)
T TIGR00890 215 FLNAVSGLLLIGLYKPYGQSLGLSDGF------LVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAML 288 (377)
T ss_pred HHHhHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHH
Confidence 333333333445556677888888877 89999999999999999999999999999999999888888887776
Q ss_pred ccchH--HHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 131 LSVNF--WMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 131 ~~~~~--~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
+.++. ..+++..++.|++.+...+. ..++.|.+|+++|+++.++.+....+|..++|.+.+.+.+
T Consensus 289 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 356 (377)
T TIGR00890 289 FIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALT 356 (377)
T ss_pred HcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 66543 33445677788877766654 8899999999999999999999999999999999999988
No 127
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.55 E-value=1.9e-13 Score=125.61 Aligned_cols=164 Identities=22% Similarity=0.313 Sum_probs=139.2
Q ss_pred HHHhhhhhhchhhhHHHHHHhh-cccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChH-HHHHHHHHHHHHHH
Q 015396 50 VLCTALPISSLFPFLYFMIKDF-QIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKP-VIIMGTASVVIFNT 127 (407)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~-~~~~~~~~~~~~~~ 127 (407)
.+.............|.+.++. |.++.+ .++..+...++..++.++.|++.||+|||+ .+..+.++..++.+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 257 (352)
T cd06174 184 FFLLSFGYYGLLTYLPLYLQEVLGLSAAE------AGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLL 257 (352)
T ss_pred HHHHHhHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 4444455566667777666654 888888 999999999999999999999999999999 99999999999999
Q ss_pred HhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcccc
Q 015396 128 LFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSS 206 (407)
Q Consensus 128 ~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw 206 (407)
.....++.+.+++..++.|++.+...+. ..++.|..|+++|++.+++.+....+|..++|.+.+.+.+
T Consensus 258 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~----------- 326 (352)
T cd06174 258 LLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLD----------- 326 (352)
T ss_pred HHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------
Confidence 9999899999999999999998887775 9999999999999999999999999999999999999998
Q ss_pred cccccCCCChhHHHHHHHHHHHHHHHHhc
Q 015396 207 ESLFGKFPYFLPCLCISLFAFGVTIAAFW 235 (407)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (407)
..+|+..+.+.++..++..+...+
T Consensus 327 -----~~~~~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 327 -----TGGYGGVFLILAALALLAALLLLL 350 (352)
T ss_pred -----ccCcchHHHHHHHHHHHHHHHhee
Confidence 445555557777777666555443
No 128
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.55 E-value=1.8e-12 Score=116.05 Aligned_cols=268 Identities=18% Similarity=0.107 Sum_probs=174.8
Q ss_pred HHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccC-----ChHHHHH-HHHHHHHHHHHhhc-----cc-
Q 015396 66 FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG-----RKPVIIM-GTASVVIFNTLFGL-----SV- 133 (407)
Q Consensus 66 ~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G-----rr~~~~~-~~~~~~~~~~~~~~-----~~- 133 (407)
.+..|++++..- .+...+...+.. ...+.+|+.||+.+ ||..+++ +..+...+..+..+ +.
T Consensus 5 VMIvEL~vpA~l------v~~lval~~~~a-p~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~ 77 (403)
T PF03209_consen 5 VMIVELGVPAWL------VALLVALHYLVA-PLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAES 77 (403)
T ss_pred hHHHHhccHHHH------HHHHHHHHHHHH-HHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccc
Confidence 355678887777 888888877764 57999999999998 7766655 45555544443332 22
Q ss_pred ------hH--H--HHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCC
Q 015396 134 ------NF--W--MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPN 202 (407)
Q Consensus 134 ------~~--~--~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~ 202 (407)
+. + ...+...+.|++.+...+. .++++|..|+|+|+++.++...+..+|.+++..+.+.+.+.
T Consensus 78 ~~~~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~------ 151 (403)
T PF03209_consen 78 GQQSSGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDP------ 151 (403)
T ss_pred ccccccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccc------
Confidence 22 2 2334457778887777665 99999999999999999999999999999999999999872
Q ss_pred cccccccccCCCChhHHHHHH--HHHHHHHHHHhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccccccccccc
Q 015396 203 LFSSESLFGKFPYFLPCLCIS--LFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLK 280 (407)
Q Consensus 203 ~~gw~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (407)
+. .-+..-.+.. +..+...++..+-.|.+.....+.++++ +......++++..
T Consensus 152 -~s--------~~rL~~v~~~~a~i~~~l~~ia~wg~E~r~~~~~~~~~~~----------------~~~f~~a~~~~~~ 206 (403)
T PF03209_consen 152 -FS--------PERLIQVIQGVALIALLLNLIALWGQEPRRSRRAAAAERP----------------RPPFREAWRQVWA 206 (403)
T ss_pred -cC--------HHHHHHHHHHHHHHHHHHHHHHHHhcccCCcccccCCCCC----------------CccHHHHHHHHHh
Confidence 11 1111112222 2222222222333343332222111000 1112335677778
Q ss_pred cchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHH
Q 015396 281 NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIA 360 (407)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 360 (407)
+|+.++.....++.......-...+ +|+.-+-+|++..+..-+....+.+..++....+.++.+|.++++....+
T Consensus 207 ~~~a~~f~~fl~l~t~a~~~QD~iL-----EPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G 281 (403)
T PF03209_consen 207 SPQARRFFVFLFLGTLAFFMQDVIL-----EPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALG 281 (403)
T ss_pred CCChhHHHHHHHHHHHHHHhhHHHc-----CCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHH
Confidence 8888777666666555444443333 33333338999999999999999999998875666666688888888899
Q ss_pred HHHHHHHHhhhhHHHh
Q 015396 361 GVLTIPLLTSYPYIAM 376 (407)
Q Consensus 361 ~~~~~~~~~~~~~~~~ 376 (407)
+....+++.++.....
T Consensus 282 ~~~~~~~f~lii~a~~ 297 (403)
T PF03209_consen 282 CLLGALAFALIILAGP 297 (403)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9888888877655443
No 129
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.54 E-value=1.8e-13 Score=127.42 Aligned_cols=148 Identities=12% Similarity=0.064 Sum_probs=129.3
Q ss_pred HHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHH
Q 015396 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (407)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (407)
++++...+..++.......+....|.+.+++|.++.+ .|++.+...++..+..++.|++.||+|+|+.+.++.+
T Consensus 205 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~------~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~ 278 (382)
T TIGR00902 205 PMNLRFLAAVCLIQGAHAAYYGFSAIYWQAAGISASA------TGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAI 278 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHhH------HHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHH
Confidence 3344444555555666667777888777889999988 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHH-HHHHHHHHHHHHhhhhhcC
Q 015396 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVS-TAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 121 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~l~~ 195 (407)
+..+..++.+++++.+.+++.+++.|+..+...+. ..++.+. |+++|++..++++ ...++|..++|.++|++.+
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~ 354 (382)
T TIGR00902 279 ACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYP 354 (382)
T ss_pred HHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998888875 8899988 9999999999985 5788999999999999998
No 130
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.54 E-value=6.8e-14 Score=132.10 Aligned_cols=139 Identities=18% Similarity=0.137 Sum_probs=114.3
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhh
Q 015396 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEI 162 (407)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~ 162 (407)
.|++.++..++..++.+++|+++||+|||+.+..+.++.+++.++.+++++.+.+++.+++.|++.+...+. ..++.|.
T Consensus 264 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 343 (420)
T PRK09528 264 FGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLN 343 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999988888888999999999999999887776554 8899999
Q ss_pred ccccchhhhhHH-HHHHHHHHHHHHHHhhhhhcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHH-Hhcccc
Q 015396 163 FREEHQALGLST-VSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPE 238 (407)
Q Consensus 163 ~~~~~r~~~~~~-~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e 238 (407)
+|++.|++..+. ++....+|.+++|.+.|++.+ ..+|+..+...++..++..+. .+.+++
T Consensus 344 ~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~----------------~~G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 344 FDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYD----------------SIGFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred cCccceeeeeeehHHHHHHHHHHHHHHHHHHHHH----------------hhCchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999887665 677888999999999999998 334555557666665554433 333443
No 131
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.54 E-value=2.9e-13 Score=125.80 Aligned_cols=156 Identities=15% Similarity=0.292 Sum_probs=122.4
Q ss_pred hhhhHHH-HHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhccchHHHH
Q 015396 60 LFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMA 138 (407)
Q Consensus 60 ~~~~~~~-~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l 138 (407)
.....|. +.+++|.++.+ .+++.+...+...++.++.|++.||+|||+++..+.++..+........++.+.+
T Consensus 218 ~~~~~~~~~~~~~g~~~~~------~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (375)
T TIGR00899 218 YIINMPLLIIHELGLPDKL------AGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWAL 291 (375)
T ss_pred HHhhhHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444554 45778998888 8888877777778889999999999999999988877766666666667788888
Q ss_pred HHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcccccccccCCCChh
Q 015396 139 VLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFL 217 (407)
Q Consensus 139 ~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~ 217 (407)
++.+++.|++.+...+. ..++.|..|+ +|++++++.+....+|..++|.+++.+.+ ..+|+.
T Consensus 292 ~~~~~~~g~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~----------------~~g~~~ 354 (375)
T TIGR00899 292 LMLQLLNAIFIGILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAE----------------RWSYHA 354 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHH----------------hccchh
Confidence 88899999987776665 7888898875 56799999999999999999999999988 444555
Q ss_pred HHHHHHHHHHHHHHHHhcccc
Q 015396 218 PCLCISLFAFGVTIAAFWLPE 238 (407)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~e 238 (407)
.+.+.++..++..+...+++|
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~ 375 (375)
T TIGR00899 355 VYWFAIVMLIVALFCLLLIKD 375 (375)
T ss_pred HHHHHHHHHHHHHHHHheecC
Confidence 557777776666666555543
No 132
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.52 E-value=3.2e-13 Score=127.09 Aligned_cols=163 Identities=17% Similarity=0.229 Sum_probs=126.7
Q ss_pred hhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhccc
Q 015396 54 ALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSV 133 (407)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~ 133 (407)
........+.++.+.++.+.+..+ .....+.+.++..++..++.+..|+++||+|||+.+..+..+..++.+.....+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~ 309 (408)
T PRK09874 232 QVATGSIAPILTLYVRELAGNVSN--IAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQ 309 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhccchH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhc
Confidence 334445566677666654433322 112256667777888889999999999999999999999888888887777778
Q ss_pred hHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcccccccccC
Q 015396 134 NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGK 212 (407)
Q Consensus 134 ~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~~~~~ 212 (407)
+.+.+++.+++.|++.+...+. .+++.+..|+++|++.+++.+....+|..+||.++|.+.+ .
T Consensus 310 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~----------------~ 373 (408)
T PRK09874 310 TPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISA----------------N 373 (408)
T ss_pred cHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHh----------------h
Confidence 8888999999999998887775 8888899999999999999999999999999999999988 4
Q ss_pred CCChhHHHHHHHHHHHHHHHHh
Q 015396 213 FPYFLPCLCISLFAFGVTIAAF 234 (407)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~ 234 (407)
++|+..+.+.++..++..+..+
T Consensus 374 ~g~~~~f~~~~~~~l~~~~~~~ 395 (408)
T PRK09874 374 YGFRAVFLVTAGVVLFNAVYSW 395 (408)
T ss_pred cchhHHHHHHHHHHHHHHHHHH
Confidence 4455555777777666555443
No 133
>PRK12382 putative transporter; Provisional
Probab=99.51 E-value=5.8e-13 Score=124.61 Aligned_cols=156 Identities=21% Similarity=0.212 Sum_probs=124.4
Q ss_pred hhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhccch
Q 015396 55 LPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVN 134 (407)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~ 134 (407)
..........|.+.++.+.+ + .++..+.+.++..+++++.|++.||+|+|+.+..+..+..++.++..+.++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~--~------~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~ 301 (392)
T PRK12382 230 VGFAVIGTFVSLYFASKGWA--M------AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPT 301 (392)
T ss_pred HHHhHHHHHHHHHHHhcCCc--h------hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHccc
Confidence 34444555666666666654 3 556667788888899999999999999999999998888888888878888
Q ss_pred HHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcccccccccCC
Q 015396 135 FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKF 213 (407)
Q Consensus 135 ~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~~~~~~ 213 (407)
.+.+++..++.|++.+...+. .+.+.|.+|+++|+++.++.+....+|..++|.+.+++.+ ..
T Consensus 302 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~----------------~~ 365 (392)
T PRK12382 302 AWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLAT----------------SF 365 (392)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------Hh
Confidence 888888999999988876665 7888999999999999999999999999999999999998 34
Q ss_pred CChhHHHHHHHHHHHHHHHHh
Q 015396 214 PYFLPCLCISLFAFGVTIAAF 234 (407)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~ 234 (407)
+|+..+.+.++..++..+..+
T Consensus 366 g~~~~~~~~~~~~~~~~~~~~ 386 (392)
T PRK12382 366 GYPSVFLAGAISAVLGIIVTI 386 (392)
T ss_pred CchHHHHHHHHHHHHHHHHHH
Confidence 455555777666666554433
No 134
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.51 E-value=1.5e-12 Score=121.80 Aligned_cols=178 Identities=12% Similarity=0.082 Sum_probs=126.4
Q ss_pred HHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHH
Q 015396 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (407)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~ 122 (407)
.+.+.+..++............|.+.+++|.+..+ .|...+.+.++..++.+..|++.||+|||+.+..+..+.
T Consensus 207 ~~~l~~~~~~~~~~~~~~~~~lp~~l~~~g~s~~~------ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~ 280 (393)
T PRK09705 207 AWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQY------SGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQ 280 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhh------hhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHH
Confidence 33344444444555556667788777788999888 999999999999999999999999999999998888777
Q ss_pred HHHHHHhhc-cchHHHHHHHHHHHhhhccchhHH-HHHHhhhcc-ccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCC
Q 015396 123 VIFNTLFGL-SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR-EEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (407)
Q Consensus 123 ~~~~~~~~~-~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 199 (407)
.++.++... .++...+. -++.|++.+...+. .....+..+ +++|++.+++.+....++..++|.+.|++.+..+
T Consensus 281 ~~~~~~~~~~~~~~~~~~--~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g- 357 (393)
T PRK09705 281 LVGFCGFIWLPLQLPVLW--AMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISG- 357 (393)
T ss_pred HHHHHHHHHccchHHHHH--HHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-
Confidence 777665443 33322222 24567776666564 556667664 6789999999999999999999999999998321
Q ss_pred CCCcccccccccCCCChhHHHHHHHHHHHHHHH-HhccccCCCCC
Q 015396 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRH 243 (407)
Q Consensus 200 ~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~ 243 (407)
+|...+.+.++..+...+. ..+.||+++++
T Consensus 358 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (393)
T PRK09705 358 --------------NYLMDWAFHALCVVGLMIITLRFAPARFPQL 388 (393)
T ss_pred --------------CchHHHHHHHHHHHHHHHHHHHhccccccch
Confidence 1444445555555444333 45667766544
No 135
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.51 E-value=4.1e-13 Score=126.69 Aligned_cols=161 Identities=17% Similarity=0.127 Sum_probs=129.4
Q ss_pred chhhhHHHHHHh-hcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhccchHHH
Q 015396 59 SLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWM 137 (407)
Q Consensus 59 ~~~~~~~~~~~~-~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (407)
......|.+.++ +|.+..+ .|++.+...++..++.++.+++.||.++++.+..+.++..++.++..+.++.+.
T Consensus 241 ~~~~~~p~~~~~~~g~~~~~------~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 314 (417)
T PRK10489 241 AVRVLYPALADEVWQMGAAQ------IGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWIL 314 (417)
T ss_pred hHHHhhHHHHHhccCCChhH------hHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHH
Confidence 345566767666 8998888 999999999999999999999999988888888888888888888888888888
Q ss_pred HHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcccccccccCCCCh
Q 015396 138 AVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYF 216 (407)
Q Consensus 138 l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~ 216 (407)
+.+..++.|++.+...+. .+++.|..|++.|+++++++.....+|..+||.+.|.+.+ ..+.+
T Consensus 315 ~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~----------------~~g~~ 378 (417)
T PRK10489 315 AVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGA----------------MMTPV 378 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHH----------------Hhchh
Confidence 888888999988777665 7899999999999999999999999999999999999998 33444
Q ss_pred hHHHHHHHHHHH-HHHHHhccccCCC
Q 015396 217 LPCLCISLFAFG-VTIAAFWLPETLH 241 (407)
Q Consensus 217 ~~~~~~~~~~~~-~~~~~~~~~e~~~ 241 (407)
..+...++..++ ..+....+|+.++
T Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (417)
T PRK10489 379 ASASASGFGLLIIGVLLLLVLGELRR 404 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHhcccccc
Confidence 444555544333 4444555666554
No 136
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.51 E-value=1.4e-13 Score=131.09 Aligned_cols=147 Identities=17% Similarity=0.151 Sum_probs=116.9
Q ss_pred HHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhccccc--CChHHHHH--H
Q 015396 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY--GRKPVIIM--G 118 (407)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~--Grr~~~~~--~ 118 (407)
++......++...........+|.+.+++|.+..+ .+++.++..++..+++++.|+++||. ++|+...+ +
T Consensus 243 ~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~ 316 (455)
T TIGR00892 243 FLVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEYE------AAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFA 316 (455)
T ss_pred HHHHHHHHHHHHHHccchHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHH
Confidence 33344444555555556666778788888998888 99999999999999999999999984 34443333 3
Q ss_pred HHHHHHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 119 TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
.++.+++.++....++++.+++.+++.|++.+...+. .+++.|.+|++++++.+++++....+|..+||.++|.+.+
T Consensus 317 ~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~ 394 (455)
T TIGR00892 317 LLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVD 394 (455)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeeh
Confidence 3444455556667788999999999999998887775 8999999999999999999999999999999999999988
No 137
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.50 E-value=6.5e-12 Score=114.79 Aligned_cols=175 Identities=17% Similarity=0.215 Sum_probs=138.9
Q ss_pred HHHHHHHHHHHHhhhhhhchhhhHH-HHHHhhc----ccccccchhhHHHHHHHHHHHHHHHhhhhhhhccccc-CChHH
Q 015396 41 TELFSIWIIVLCTALPISSLFPFLY-FMIKDFQ----IAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-GRKPV 114 (407)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-Grr~~ 114 (407)
|.++.++...+-.-+.++.....+- ++..+++ .++++ +.-+.++|..--=+..+++|+++||+ |+|++
T Consensus 21 r~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~------A~~l~~~y~slVY~t~i~GG~laDr~LG~~~t 94 (498)
T COG3104 21 RGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETH------ATGLFSAYGSLVYLTPIIGGWLADRVLGTRRT 94 (498)
T ss_pred chHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHh------hHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH
Confidence 5677788888888888776666664 5556666 88777 55555555544456788999999995 99999
Q ss_pred HHHHHHHHHHHHHHhhccc--hHHHHHHHHHHHhhhccchhHH-HHHHhhhcccc--chhhhhHHHHHHHHHHHHHHHHh
Q 015396 115 IIMGTASVVIFNTLFGLSV--NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE--HQALGLSTVSTAWGIGLIIGPAL 189 (407)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~~~~~~ 189 (407)
+.++.++..++.++.+.+. +...++++..+.++|.|..-+. .+++.|.+|++ +|-..++++.++.++|+.++|++
T Consensus 95 I~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i 174 (498)
T COG3104 95 IVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPII 174 (498)
T ss_pred HHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHH
Confidence 9999999999999999884 7888999999999999999885 99999999854 36678888999999999999999
Q ss_pred hhhhcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhccc
Q 015396 190 GGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLP 237 (407)
Q Consensus 190 ~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (407)
.+++.+ +.+|+..|...++--.+.++.....+
T Consensus 175 ~~~~~~----------------~~g~~~gF~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 175 TGLLAI----------------NYGWHVGFGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred HHHHHH----------------hhCHHHHHHHHHHHHHHHHHHHHHcc
Confidence 999998 55666666776666555555554444
No 138
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.50 E-value=6.9e-13 Score=124.46 Aligned_cols=170 Identities=15% Similarity=0.237 Sum_probs=123.6
Q ss_pred HHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHH-HHHHHH
Q 015396 44 FSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII-MGTASV 122 (407)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~-~~~~~~ 122 (407)
+...+..++............|.+.+++|.+..+ .+++.+...++..++.++.|+++||+|||+.+. .+.+..
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~------~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~ 298 (402)
T TIGR00897 225 LLGGMVRIINTIGLFGFAVFLPMFVAELGFSTSE------WLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGC 298 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhH------HHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHH
Confidence 3333444444555555667788888889999888 888888999999999999999999999988764 333333
Q ss_pred HHHHHHhh-----ccchHHHHHHHHHHHhhhccchhHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCC
Q 015396 123 VIFNTLFG-----LSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (407)
Q Consensus 123 ~~~~~~~~-----~~~~~~~l~~~r~l~G~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 197 (407)
.++.+... ..++.+.+++..++.|++.+...+....+.|.. +++|++++|+.+....+|..++|.+++.+.+
T Consensus 299 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~-- 375 (402)
T TIGR00897 299 GIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVPLAAVFPTLA-PKHKGAAMSVLNLSAGLSAFLAPAIAVLFIG-- 375 (402)
T ss_pred HHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 33332222 234677777788888887666655555667764 4689999999999999999999999999998
Q ss_pred CCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhcc
Q 015396 198 EKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWL 236 (407)
Q Consensus 198 ~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (407)
.+++...+++.++..++..+...++
T Consensus 376 --------------~~g~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 376 --------------FFGAIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred --------------hcchHHHHHHHHHHHHHHHHHHHHh
Confidence 4455555577776666655554443
No 139
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.49 E-value=1.1e-12 Score=122.30 Aligned_cols=155 Identities=19% Similarity=0.267 Sum_probs=117.7
Q ss_pred hhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhccchH
Q 015396 56 PISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNF 135 (407)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~ 135 (407)
.......++|.+.++.|.++.+ .++..+...++..+++++.|++.||+|+|+++..+.....++.+... . .
T Consensus 215 ~~~~~~~~lp~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~ 285 (381)
T PRK03633 215 VLGSLYGLMPLYLNHQGMSDAS------IGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-Q 285 (381)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-h
Confidence 3344455678788888888887 89999999999999999999999999999999888877777665443 2 2
Q ss_pred HHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcccccccccCCC
Q 015396 136 WMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFP 214 (407)
Q Consensus 136 ~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~~~~~~~ 214 (407)
.......++.|++.....|. .+.+.|..|+++++...+..+...++|..+||.++|++.+ .++
T Consensus 286 ~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~----------------~~g 349 (381)
T PRK03633 286 AAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQ----------------NYS 349 (381)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------HhC
Confidence 33445667778765555564 8888999998888888888888999999999999999998 334
Q ss_pred ChhHHHHHHHHHHHHHHHHhc
Q 015396 215 YFLPCLCISLFAFGVTIAAFW 235 (407)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~ 235 (407)
++..+.+.+...++..+..++
T Consensus 350 ~~~~f~~~~~~~l~~~~~~~~ 370 (381)
T PRK03633 350 DNLLFIMIASVSFIYLLMLLR 370 (381)
T ss_pred ccHHHHHHHHHHHHHHHHHHh
Confidence 444556666666554444433
No 140
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.48 E-value=1.2e-12 Score=122.21 Aligned_cols=148 Identities=13% Similarity=0.093 Sum_probs=106.8
Q ss_pred HHHHHHHHHHHHhhhhhhchhhhHHHHH-HhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChH--HHH-
Q 015396 41 TELFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKP--VII- 116 (407)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~--~~~- 116 (407)
+.++......+.............|.+. +++|.+..+ .++..+...++..++.++.|+++||+|||+ ...
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 288 (399)
T TIGR00893 215 RRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILE------AGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFA 288 (399)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHH------hhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHH
Confidence 3444555566666666667777777555 567888888 899999999999999999999999999996 111
Q ss_pred -----HHHHHHHHHHHHhhccchHHHHHHHHHHHhhhccchhH-HHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhh
Q 015396 117 -----MGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (407)
Q Consensus 117 -----~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 190 (407)
.+.++..+........++.+..+....+.+.+.+ ..+ ..+++.|.+|+++|++++++.+....+|..++|.+.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~ 367 (399)
T TIGR00893 289 RKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVI 367 (399)
T ss_pred HHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHh
Confidence 1111111222222223344544444445455555 455 499999999999999999999999999999999999
Q ss_pred hhhcC
Q 015396 191 GFLAQ 195 (407)
Q Consensus 191 ~~l~~ 195 (407)
+.+.+
T Consensus 368 g~l~~ 372 (399)
T TIGR00893 368 GAIAA 372 (399)
T ss_pred hhhcc
Confidence 99998
No 141
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.47 E-value=1.1e-12 Score=126.80 Aligned_cols=131 Identities=20% Similarity=0.245 Sum_probs=103.9
Q ss_pred chhhhHHHHH-HhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhcc--chH
Q 015396 59 SLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS--VNF 135 (407)
Q Consensus 59 ~~~~~~~~~~-~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~--~~~ 135 (407)
.....+|.+. +++|.+..+ .+++.+...++..++.++.|+++||+|||+++..+.++..+..+..... .+.
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~------~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHT------VANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANV 366 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHH
Confidence 3456778776 588999988 9999999999999999999999999999999888877666655443332 344
Q ss_pred HHHHHHHHHHhh-hccchhHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 136 WMAVLTRFLLGS-LNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 136 ~~l~~~r~l~G~-~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
+.+.+..++.+. +.+......+++.|.+|+++|++++++.+....+|..+||.++|.+.+
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~ 427 (496)
T PRK03893 367 WVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQ 427 (496)
T ss_pred HHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhc
Confidence 444455555544 334333347889999999999999999999999999999999999998
No 142
>PRK03699 putative transporter; Provisional
Probab=99.47 E-value=1.1e-12 Score=122.71 Aligned_cols=173 Identities=12% Similarity=0.084 Sum_probs=127.0
Q ss_pred HHHHHHHHHHhhhhhhchhhhHHHHH-HhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHH
Q 015396 43 LFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (407)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~ 121 (407)
++...+..++.......+..+.|.+. +++|.+..+ .+++.+.+.++..++.+..|+++||++||+.+.....+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~------~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~ 280 (394)
T PRK03699 207 VLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLED------AGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGL 280 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHH------hhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHH
Confidence 33344444444445555667788666 668999988 99999999999999999999999999999999888777
Q ss_pred HHHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCC
Q 015396 122 VVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY 200 (407)
Q Consensus 122 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 200 (407)
..+...+....++.+.+.+..++.|++.+...+. .++..|..| +++++..+.......+|..++|.+.|++.+
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~----- 354 (394)
T PRK03699 281 ALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVA----- 354 (394)
T ss_pred HHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHH-----
Confidence 7777666666777777777778888876665554 667777765 456778888888899999999999999998
Q ss_pred CCcccccccccCCCChhHHHHHHHHHHHHHHHHhcccc
Q 015396 201 PNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPE 238 (407)
Q Consensus 201 ~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 238 (407)
..|+ +..++..++..++..+....+++
T Consensus 355 --~~g~---------~~~~~~~~~~~~~~~~~~~~~~~ 381 (394)
T PRK03699 355 --HFGL---------QAALLTANGLYAVVFVMCILLGF 381 (394)
T ss_pred --HhCc---------hhhhhhhHHHHHHHHHHHHHHHH
Confidence 3444 44445555555544444444443
No 143
>PRK03545 putative arabinose transporter; Provisional
Probab=99.47 E-value=2.2e-12 Score=120.57 Aligned_cols=150 Identities=13% Similarity=0.128 Sum_probs=113.3
Q ss_pred hhHH-HHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhccchHHHHHH
Q 015396 62 PFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVL 140 (407)
Q Consensus 62 ~~~~-~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 140 (407)
..++ .+.+++|.+..+ .+++.+...++..+++++.|+++||+|||+......+.......+....++.+.+++
T Consensus 226 ~~~~~~l~~~~g~s~~~------~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 299 (390)
T PRK03545 226 SYIEPFVQQVAGLSENF------ATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLIAIALLLVCLLLLLPAANSEWHLSV 299 (390)
T ss_pred HHHHHHHHHhcCCCccH------HHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhchHHHHHH
Confidence 3444 445567888888 999999999999999999999999999887554433333333333445677888888
Q ss_pred HHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcccccccccCCCChhHH
Q 015396 141 TRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPC 219 (407)
Q Consensus 141 ~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~ 219 (407)
..++.|++.+...+. ...+.|..| ++|++++++.+....+|..+||+++|.+.+ .++++..+
T Consensus 300 ~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~----------------~~g~~~~~ 362 (390)
T PRK03545 300 LSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSL----------------HLGLSSIG 362 (390)
T ss_pred HHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------------ccChhHHH
Confidence 888999987665554 677778766 688999999999999999999999999998 44555555
Q ss_pred HHHHHHHHHHHHHHh
Q 015396 220 LCISLFAFGVTIAAF 234 (407)
Q Consensus 220 ~~~~~~~~~~~~~~~ 234 (407)
...+++.++..+...
T Consensus 363 ~~~~~~~~~~~~~~~ 377 (390)
T PRK03545 363 YVGAALALAALVWSI 377 (390)
T ss_pred HHHHHHHHHHHHHHH
Confidence 777777666554433
No 144
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.45 E-value=7.7e-13 Score=123.63 Aligned_cols=147 Identities=20% Similarity=0.215 Sum_probs=112.4
Q ss_pred HHHHHHHHHHhhhhhhchhhhHHHHH-HhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHH
Q 015396 43 LFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (407)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~ 121 (407)
++......+.............|.+. +++|.+..+ .+...+...++..++.++.|+++||+|||+.+.....+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~ 294 (394)
T TIGR00883 221 FLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANS------ALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVL 294 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhH------HHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHH
Confidence 44444455555555666667778666 678888888 89999999999999999999999999999987755544
Q ss_pred HHHHH--HHhhc--cchHHHHHHHHHHHhhhccchhH-HHHHHhhhccccchhhhhHHH-HHHHHHHHHHHHHhhhhhcC
Q 015396 122 VVIFN--TLFGL--SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTV-STAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 122 ~~~~~--~~~~~--~~~~~~l~~~r~l~G~~~g~~~~-~~~~~~~~~~~~~r~~~~~~~-~~~~~~g~~~~~~~~~~l~~ 195 (407)
..+.. ..... .++.+.+++..++.|++.+...+ ..+++.|.+|+++|++++++. +....+|..++|.++|.+.+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~ 374 (394)
T TIGR00883 295 AALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVA 374 (394)
T ss_pred HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHH
Confidence 43332 12222 35667777778888887766666 499999999999999999984 56677899999999999998
No 145
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.45 E-value=2e-12 Score=123.78 Aligned_cols=147 Identities=15% Similarity=0.164 Sum_probs=110.0
Q ss_pred HHHHHHHHHHhhhhhhchhhhHHHH-HHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHH
Q 015396 43 LFSIWIIVLCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (407)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~ 121 (407)
++.+++..++.+........+.|.+ .+++|.+..+ .++..+...++..++.++.|+++||+|||+.+.....+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~------a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~ 333 (467)
T PRK09556 260 IWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKED------AINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIAL 333 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHH
Confidence 4445555555555555567778855 4678999988 89999999999999999999999999999887665444
Q ss_pred HHHHH--HHhhccchHHHHHHHHHHHhhhc-cchhHHHHHHhhhccccchhhhhHHHHHHHHH-HHHHHHHhhhhhcC
Q 015396 122 VVIFN--TLFGLSVNFWMAVLTRFLLGSLN-GLLGPIKAYACEIFREEHQALGLSTVSTAWGI-GLIIGPALGGFLAQ 195 (407)
Q Consensus 122 ~~~~~--~~~~~~~~~~~l~~~r~l~G~~~-g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~l~~ 195 (407)
..++. +.....++.+.+.+.+++.|+.. +..........|.+|+++|+++.|+.+....+ |..++|.+.|++.+
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~ 411 (467)
T PRK09556 334 ALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIAD 411 (467)
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhc
Confidence 43332 22233456667777888888643 33333346677999999999999999888886 77999999999998
No 146
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.44 E-value=3.5e-11 Score=107.65 Aligned_cols=304 Identities=12% Similarity=0.018 Sum_probs=193.1
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHH-HHHHHHHHHHHhhccch--H-HHHHHHHHHHhhhccchhHH-
Q 015396 81 GSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM-GTASVVIFNTLFGLSVN--F-WMAVLTRFLLGSLNGLLGPI- 155 (407)
Q Consensus 81 ~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~-~~~~~~~~~~~~~~~~~--~-~~l~~~r~l~G~~~g~~~~~- 155 (407)
..+.|...++..+...+.+|+.|.++|+.|+||..+. ...+..++..+..++++ + +..++...+..++.....+.
T Consensus 57 ~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfy 136 (438)
T COG2270 57 TAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFY 136 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheeh
Confidence 3448888889999999999999999999998766554 44445555555555443 4 44555557777777666665
Q ss_pred HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhh--hhhcCCCCCCC-CcccccccccCCCChhHHHHHHHHHHHHHHH
Q 015396 156 KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG--GFLAQPAEKYP-NLFSSESLFGKFPYFLPCLCISLFAFGVTIA 232 (407)
Q Consensus 156 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~--~~l~~~~~~~~-~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (407)
.+++.+..++++-++..+.-.....+|+.+.-++. ........+.+ ..++-...- ...-|..+.+.++..++..+-
T Consensus 137 ds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~-~~~~ri~~~l~A~W~li~~iP 215 (438)
T COG2270 137 DSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPAD-GEDVRITGLLAALWWLLFALP 215 (438)
T ss_pred hhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccc-cccchhHHHHHHHHHHHHHhH
Confidence 99999999998888877776555566665544432 12111101000 011111111 344566667777766664444
Q ss_pred -HhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccccccccccccchhHHHHHHHHHHhhccchhhhHHhhhccC
Q 015396 233 -AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANS 311 (407)
Q Consensus 233 -~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (407)
++..++.++...... +...... ++-....+++.+++.+....+..+++.-...+...+-..|...
T Consensus 216 m~~~v~~~~~~~~~~~---~~l~~g~-----------k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~ 281 (438)
T COG2270 216 MILNVHDAEKISSPPP---TALRNGF-----------KELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAA 281 (438)
T ss_pred HHhcccccccccccch---HHHHHHH-----------HHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 444555443211110 0000000 0112245667777888888888888887777777777777765
Q ss_pred CCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHHHHHhhhhHHHhhhhhhhH---hhhh-
Q 015396 312 PKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLA---FLLN- 387 (407)
Q Consensus 312 ~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~- 387 (407)
. +|++..+...+....++.++++.+ +.+++++|+|.|+++.++.++..+..+...+......++.. +...
T Consensus 282 ~-----~gls~~~lll~g~~~~vvA~lg~i-i~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~ 355 (438)
T COG2270 282 D-----LGLSSTELLLIGIALSVVAALGAI-IAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSL 355 (438)
T ss_pred H-----cCccHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhc
Confidence 4 899999999999999999999996 88999999999999888888776666654433322222211 1111
Q ss_pred --hhHHHHHHHhhcCCCCCC
Q 015396 388 --CASVVKNLLSSSGPGSKR 405 (407)
Q Consensus 388 --~~~~~~~~~~~~~p~~~r 405 (407)
.-+..++++.+++|+.+-
T Consensus 356 G~~qA~SRSy~~~lvp~~k~ 375 (438)
T COG2270 356 GGAQASSRSYLARLVPKGKE 375 (438)
T ss_pred chHHHHHHHHHHHhCCCccc
Confidence 223567888999988654
No 147
>PRK09952 shikimate transporter; Provisional
Probab=99.44 E-value=3.7e-12 Score=120.79 Aligned_cols=169 Identities=16% Similarity=0.176 Sum_probs=115.5
Q ss_pred HHhhhhhhchhhhHHHH-HHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHh
Q 015396 51 LCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF 129 (407)
Q Consensus 51 ~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~ 129 (407)
+.............|.+ .+++|.+... ...+.....+...++.++.|+++||+|||+.+..+.++..++.+.+
T Consensus 260 ~~~~~~~~~~~~~~~~y~~~~~g~s~~~------~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~ 333 (438)
T PRK09952 260 LCELLTMYIVTAFALNYSTQNLGLPREL------FLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPF 333 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 33344444455666654 4667877765 5555555666778888999999999999999888876665544333
Q ss_pred hc----cchHHHHHHHHHHHhhhccchhH-HHHHHhhhccccchhhhhHHH-HHHHHHHHHHHHHhhhhhcCCCCCCCCc
Q 015396 130 GL----SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTV-STAWGIGLIIGPALGGFLAQPAEKYPNL 203 (407)
Q Consensus 130 ~~----~~~~~~l~~~r~l~G~~~g~~~~-~~~~~~~~~~~~~r~~~~~~~-~~~~~~g~~~~~~~~~~l~~~~~~~~~~ 203 (407)
.. .++.+.+++..++.|++.+...+ ..++++|.+|++.|+.+.++. ..+..+|+.++|.+.+++.+..
T Consensus 334 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~------ 407 (438)
T PRK09952 334 FMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYF------ 407 (438)
T ss_pred HHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc------
Confidence 22 22344445556666777666555 488999999999999998885 4455689999999999998721
Q ss_pred ccccccccCCCChhHHHHHHHHHHHHHHHHhccccC
Q 015396 204 FSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPET 239 (407)
Q Consensus 204 ~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 239 (407)
..+|..++.+.++..++..+..+.++|+
T Consensus 408 --------~~~~~~~~~~~~~~~~i~~v~~~~~~~~ 435 (438)
T PRK09952 408 --------GGSWHSVAIYLLAGCLISAMTALLMKDN 435 (438)
T ss_pred --------CCCchHHHHHHHHHHHHHHHHHHHcccc
Confidence 1235555566666666666665666653
No 148
>TIGR00895 2A0115 benzoate transport.
Probab=99.41 E-value=3.6e-12 Score=119.32 Aligned_cols=142 Identities=20% Similarity=0.264 Sum_probs=113.2
Q ss_pred HHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHH
Q 015396 46 IWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIF 125 (407)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~ 125 (407)
++...++............|.+.+++|.+..+ .++..+...++..++.++.|+++||+|||+.+....+.....
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 328 (398)
T TIGR00895 255 LWLLYFMLLVGVYFLTNWLPKLMVELGFSLSL------AATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFA 328 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHH
Confidence 33444444455555666778888899999888 899999999999999999999999999996555444444444
Q ss_pred HHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhh
Q 015396 126 NTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (407)
Q Consensus 126 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 193 (407)
.++.....+.+.+++..++.|++.+...+. .+++.|.+|+++|++++++......+|..+||.++|++
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 329 VLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 333333567777788889999988777775 99999999999999999999999999999999999876
No 149
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.41 E-value=8e-12 Score=116.45 Aligned_cols=143 Identities=15% Similarity=0.119 Sum_probs=117.1
Q ss_pred HHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHH
Q 015396 46 IWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIF 125 (407)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~ 125 (407)
.....++............|.+.++.|.+..+ .|...+...++..+..++.|++.||+|+|+.+..+.++.+++
T Consensus 210 ~~~~~~l~~~~~~~~~~~~~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~ 283 (382)
T PRK11128 210 FLLCVSLLQGSHAAYYGFSAIYWQAAGYSAST------IGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVR 283 (382)
T ss_pred HHHHHHHHHHHhHhHHHHHHHHHHHCCCCHhH------HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Confidence 33334443444444556667677788998887 899999888999999999999999999999999999998888
Q ss_pred HHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHH-HHHHHHHHHHHHhhhhhcC
Q 015396 126 NTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVS-TAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 126 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~l~~ 195 (407)
.+..+..++++.+++..++.|++.+...+. ..++.+. +++++++..+..+ ....+|..+||.++|.+.+
T Consensus 284 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~ 354 (382)
T PRK11128 284 WGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQ 354 (382)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888899999999999999998877775 7777776 5666788888875 6677888999999999998
No 150
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.40 E-value=7.9e-12 Score=119.94 Aligned_cols=173 Identities=17% Similarity=0.188 Sum_probs=123.3
Q ss_pred HHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHH
Q 015396 46 IWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIF 125 (407)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~ 125 (407)
..+..+.............|.+.+++|.+..+ .++......++..++.++.|+++||+|||+.+..+.++..++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 362 (481)
T TIGR00879 289 VVLQWFQQFTGINAIMYYSPTIFENAGVSTDH------AFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAIC 362 (481)
T ss_pred HHHHHHHHHhCCeehHHHHHHHHHHcCCCchH------HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 33344444444555666778888899998877 888888999999999999999999999999999888877777
Q ss_pred HHHhhc-----cc------hHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhh
Q 015396 126 NTLFGL-----SV------NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (407)
Q Consensus 126 ~~~~~~-----~~------~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 193 (407)
.++..+ .+ +...+....+..+.......+. ..++.|.+|+++|++++++.+....+|.+++|.+.+.+
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~ 442 (481)
T TIGR00879 363 LFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTM 442 (481)
T ss_pred HHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666552 11 2233333333333322223344 77889999999999999999999999999999999999
Q ss_pred cCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHH-HhccccCC
Q 015396 194 AQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETL 240 (407)
Q Consensus 194 ~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~ 240 (407)
.+ ..+|+..| ++.++..++..+. .++.||++
T Consensus 443 ~~-------~~~~~~~f---------~~~~~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 443 LE-------SIGVGGVF---------IFFGGLNVLGLIFVYFFLPETK 474 (481)
T ss_pred HH-------hcCcccee---------hhHHHHHHHHHHHHheecccCC
Confidence 87 34444444 5666665554444 44556644
No 151
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.39 E-value=1.2e-11 Score=117.14 Aligned_cols=167 Identities=13% Similarity=0.035 Sum_probs=109.0
Q ss_pred HHHHHHHHHhhhhhhchhhhHHHHH-HhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhccccc--CChHHH-HH--
Q 015396 44 FSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY--GRKPVI-IM-- 117 (407)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~--Grr~~~-~~-- 117 (407)
+.+....+........+..++|.+. +++|.+..+ .+...+.+.++..++.++.|+++||+ ++|+.. ..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~------a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~ 319 (434)
T PRK11663 246 WLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVT------ANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFA 319 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHH------HHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHH
Confidence 3344444444455555666777666 678999988 89999999999999999999999999 333322 22
Q ss_pred -HHHHHHHHHHHhhccchHHHHHHHHHHHhhhccchh-HHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 118 -GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLG-PIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 118 -~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
+.....+...... ..+...+.+..+..|++..... .......|.+|+++|++++|+.+....+|..++|.+.+++.+
T Consensus 320 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~ 398 (434)
T PRK11663 320 AGILLSVGSLWLMP-FASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLE 398 (434)
T ss_pred HHHHHHHHHHHHcc-cccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHH
Confidence 1121221212222 2333334344444554322222 235567899999999999999999999999999999999998
Q ss_pred CCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHHH
Q 015396 196 PAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAA 233 (407)
Q Consensus 196 ~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (407)
..+|...+...++..++..+..
T Consensus 399 ----------------~~g~~~~f~~~~~~~~~~~~~~ 420 (434)
T PRK11663 399 ----------------IWHWTGFFVVISIAAGISALLL 420 (434)
T ss_pred ----------------hcccHHHHHHHHHHHHHHHHHH
Confidence 3344444466666665544433
No 152
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.38 E-value=8.4e-12 Score=118.94 Aligned_cols=170 Identities=14% Similarity=0.064 Sum_probs=110.0
Q ss_pred HHHHHHHHHHhhhhhhchhhhHHHHHH-hhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhccccc--CChHHH-HHH
Q 015396 43 LFSIWIIVLCTALPISSLFPFLYFMIK-DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY--GRKPVI-IMG 118 (407)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~--Grr~~~-~~~ 118 (407)
++...+..++..........++|.+.+ +.|.+..+ .++....+.++..++.++.|+++||+ |||+.. ...
T Consensus 255 ~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~------~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~ 328 (452)
T PRK11273 255 LWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDK------SSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFF 328 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHH
Confidence 333444444444455556678886665 47888887 88888889999999999999999999 555432 222
Q ss_pred HHHHHHHHHHhhc--cchHHHHHHHHHHHhhhccc-hhHHHHHHhhhccccchhhhhHHHHHHHHHHHH-HHHHhhhhhc
Q 015396 119 TASVVIFNTLFGL--SVNFWMAVLTRFLLGSLNGL-LGPIKAYACEIFREEHQALGLSTVSTAWGIGLI-IGPALGGFLA 194 (407)
Q Consensus 119 ~~~~~~~~~~~~~--~~~~~~l~~~r~l~G~~~g~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~~~~~l~ 194 (407)
..+..++.+...+ ..+.+..++..++.|.+... ......+..|.+|+++|++++|+.+....+|.. ++|.+.|.+.
T Consensus 329 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~ 408 (452)
T PRK11273 329 MTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTV 408 (452)
T ss_pred HHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHH
Confidence 2223333222222 33455454555555554222 222345678999999999999999888888765 4899999999
Q ss_pred CCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHh
Q 015396 195 QPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAF 234 (407)
Q Consensus 195 ~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (407)
+ +.+|+..+.+.++..++.++...
T Consensus 409 ~----------------~~g~~~~f~~~~~~~~~~~~~~~ 432 (452)
T PRK11273 409 D----------------FFGWDGGFMVMIGGSILAVILLI 432 (452)
T ss_pred H----------------HhcchHHHHHHHHHHHHHHHHHH
Confidence 8 33445555666666555554443
No 153
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.37 E-value=7.1e-12 Score=117.67 Aligned_cols=131 Identities=18% Similarity=0.263 Sum_probs=105.1
Q ss_pred chhhhHH-HHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHH-HHhhccchHH
Q 015396 59 SLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFN-TLFGLSVNFW 136 (407)
Q Consensus 59 ~~~~~~~-~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~-~~~~~~~~~~ 136 (407)
......| .+.+++|.+..+ .+++.+...++..++.++.|+++||+|||+.+..+.++..+.. ......++.+
T Consensus 256 ~~~~~~~~~~~~~~g~s~~~------~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (405)
T TIGR00891 256 PIQDLLPTYLKADLGLSPHT------VANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVA 329 (405)
T ss_pred hhhhhhHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchH
Confidence 3444556 445678999888 9999999999999999999999999999999888877653333 2333456667
Q ss_pred HHHHHHHHHhhhccchhH-HHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 137 MAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 137 ~l~~~r~l~G~~~g~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
.+.+..++.|+..+...+ ...++.|.+|+++|++++|+.+....+|..++|+++|.+.+
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~ 389 (405)
T TIGR00891 330 VLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQ 389 (405)
T ss_pred HHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 777776777765444444 58889999999999999999999999999999999999998
No 154
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.36 E-value=1.7e-11 Score=116.05 Aligned_cols=130 Identities=19% Similarity=0.229 Sum_probs=98.8
Q ss_pred hhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhccchHHHHH
Q 015396 60 LFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAV 139 (407)
Q Consensus 60 ~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~ 139 (407)
+...+|.+.++.|.++.+ .+...+...++..++.++.|++.||+|||+.+..+.++..+..+.....++.....
T Consensus 250 ~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (426)
T PRK12307 250 IFGLLPTYLAGEGFDTGV------VSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLL 323 (426)
T ss_pred HHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHH
Confidence 455678777778888877 88888999999999999999999999999999888877766655443322211112
Q ss_pred HHHHHHhh--hccchhH-HHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 140 LTRFLLGS--LNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 140 ~~r~l~G~--~~g~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
+.-++.|+ +.....+ .+.++.|.+|+++|++++|+......+|..++|.+.+++.+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~ 382 (426)
T PRK12307 324 LGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGI 382 (426)
T ss_pred HHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHH
Confidence 22233333 2222333 47788999999999999999999999999999999999988
No 155
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.36 E-value=4.4e-12 Score=117.28 Aligned_cols=128 Identities=16% Similarity=0.185 Sum_probs=114.2
Q ss_pred hhHHHHHHh-hcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhccch-HHHHH
Q 015396 62 PFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVN-FWMAV 139 (407)
Q Consensus 62 ~~~~~~~~~-~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~-~~~l~ 139 (407)
...|.+.++ +|.+..+ .+++.+...++..++.++.|++.||+|||+.+..+..+.+++.....+.++ .+.++
T Consensus 232 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTH------YGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFL 305 (365)
T ss_pred HHhHHHHHHHhCCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHH
Confidence 566777665 8888888 999999999999999999999999999999999888888888777777764 88888
Q ss_pred HHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 140 LTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 140 ~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
+..++.|++.+...+. .+++.|.+|+++|+++.++.+....+|..++|.++|.+.+
T Consensus 306 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~ 362 (365)
T TIGR00900 306 VLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLAD 362 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999998887775 8999999999999999999999999999999999999987
No 156
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.36 E-value=4e-11 Score=113.37 Aligned_cols=178 Identities=13% Similarity=0.179 Sum_probs=138.9
Q ss_pred HHHHHHHHHHHhhhhhhchhhhHH-HHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCCh--HHHHHH
Q 015396 42 ELFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRK--PVIIMG 118 (407)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr--~~~~~~ 118 (407)
.+....++.++..-+.+.+..... +..+++|.+..+ ...+..+..+..++|++++|++.||+|.| ++++.+
T Consensus 282 ~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~------l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~ 355 (477)
T PF11700_consen 282 QLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQ------LIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLIS 355 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHH
Confidence 334444454544444444444444 445689999999 88888888999999999999999999999 898888
Q ss_pred HHHHHHHHHHhhc--------cchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHh
Q 015396 119 TASVVIFNTLFGL--------SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPAL 189 (407)
Q Consensus 119 ~~~~~~~~~~~~~--------~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~ 189 (407)
++++.+..+...+ .++.+.+.+.-++.|++.|...+. .++.+|..|+++.+..+|++....-....+||++
T Consensus 356 l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll 435 (477)
T PF11700_consen 356 LILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLL 435 (477)
T ss_pred HHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHH
Confidence 8888665555444 678888999999999999998886 9999999999999999999999999999999999
Q ss_pred hhhhcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhccccCC
Q 015396 190 GGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETL 240 (407)
Q Consensus 190 ~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 240 (407)
-+.+.+.++ ..|..+....++.++.++++.+++.++
T Consensus 436 ~g~i~~~tg---------------~~r~g~~~l~~lf~~gl~ll~~v~~~~ 471 (477)
T PF11700_consen 436 FGLITDATG---------------SQRYGFLFLLVLFLIGLILLFFVDVEK 471 (477)
T ss_pred HHHHHHHhC---------------CchhHHHHHHHHHHHHHHHHhhccchh
Confidence 999998432 234455666666666666666666543
No 157
>PRK10504 putative transporter; Provisional
Probab=99.34 E-value=2.6e-11 Score=116.31 Aligned_cols=147 Identities=16% Similarity=0.179 Sum_probs=115.3
Q ss_pred HHHHHHHHHHhhhhhhchhhhHHHHHH-hhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHH
Q 015396 43 LFSIWIIVLCTALPISSLFPFLYFMIK-DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (407)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~ 121 (407)
+.......++............|.+.+ .+|.++.+ .++......++..++.++.|++.||+|||+++..+..+
T Consensus 263 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~ 336 (471)
T PRK10504 263 FSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFH------AGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLG 336 (471)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHH
Confidence 333444455555555555666776665 47888877 88888888888888889999999999999999988887
Q ss_pred HHHHHHHhhcc---chHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 122 VVIFNTLFGLS---VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 122 ~~~~~~~~~~~---~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
..+...+..+. ++.+.+.+..++.|++.+...+. ..+..+..|+++|+.+.++.++...+|..+|+.+++.+.+
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~ 414 (471)
T PRK10504 337 LALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLG 414 (471)
T ss_pred HHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77776655543 33444555667788877776654 8888899999999999999999999999999999999887
No 158
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.34 E-value=4.2e-11 Score=114.44 Aligned_cols=137 Identities=18% Similarity=0.252 Sum_probs=121.6
Q ss_pred hhhhhhchhhhHHHHH-HhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhc
Q 015396 53 TALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL 131 (407)
Q Consensus 53 ~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~ 131 (407)
..+....+...+|.+. +++|.+... .|++.+++.+|.+++++..+++.+|+++++.+..+.++.+++.+..++
T Consensus 230 ~~l~~~a~~aLlPl~a~~~l~~~a~~------yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal 303 (524)
T PF05977_consen 230 FNLFASAVWALLPLFARDVLGGGASG------YGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLAL 303 (524)
T ss_pred HHHhhhHHHHhhhHHHHHHhCCcHHH------HHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhc
Confidence 3344444556678665 568888888 999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 132 SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 132 ~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
+++.+..++..++.|++....... .+.+.+..|++.|||+++++.+....+..+|.++.|.+.+
T Consensus 304 ~~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~ 368 (524)
T PF05977_consen 304 SPSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLAD 368 (524)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999987776664 8899999999999999999999999999999999999998
No 159
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.33 E-value=3.2e-11 Score=116.49 Aligned_cols=181 Identities=14% Similarity=0.069 Sum_probs=110.2
Q ss_pred hhhchhhhHHHHHHhhcccccccchh----hH-HHH-HHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHh
Q 015396 56 PISSLFPFLYFMIKDFQIAKREEDIG----SY-AGY-VGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF 129 (407)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~s~~~~~~~----~~-~g~-~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~ 129 (407)
..+......|.+.++.|.+..+.... .+ ... ...+..++..++.++.++++||+|||++++.+.++.+++..+.
T Consensus 303 ~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l 382 (502)
T TIGR00887 303 AFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVL 382 (502)
T ss_pred HHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHH
Confidence 33344455777778888875431100 00 011 2334455666788999999999999999988887777666555
Q ss_pred hccc----hHHHHHHHHHHHhhh-ccchhHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcc
Q 015396 130 GLSV----NFWMAVLTRFLLGSL-NGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLF 204 (407)
Q Consensus 130 ~~~~----~~~~l~~~r~l~G~~-~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~ 204 (407)
++.. +...+...-+...++ .+.......+.+|.+|++.|+++.++.+....+|.+++|.+.+++.+..+...
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~--- 459 (502)
T TIGR00887 383 GFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTK--- 459 (502)
T ss_pred HHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccc---
Confidence 4422 111111111122222 22233347778999999999999999999999999999999999987321000
Q ss_pred cccccccCCCChhHHHHHHHHHHHHHHHHhccccCCCC
Q 015396 205 SSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHR 242 (407)
Q Consensus 205 gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 242 (407)
|+.. ..++...+.+.++..++..+..+++||++.+
T Consensus 460 ~~~~---~~~~~~~~~i~~~~~~~~~i~~~~lpEt~~~ 494 (502)
T TIGR00887 460 GYPT---GIWMGHVLEIFALFMFLGILFTLLIPETKGK 494 (502)
T ss_pred cccc---cccchHHHHHHHHHHHHHHHHheEeccCCCC
Confidence 0000 1223344466666655555555677987653
No 160
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.33 E-value=7.7e-11 Score=106.44 Aligned_cols=171 Identities=15% Similarity=0.155 Sum_probs=129.0
Q ss_pred HHHHHHHHHHHHhhhhhhchhhhH-HHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHH
Q 015396 41 TELFSIWIIVLCTALPISSLFPFL-YFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (407)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (407)
+.++......++...+......++ |.+.+..|.+.+. ++++.-++.++..+++.+.|+++|| +.|+.+....
T Consensus 211 p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~------vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~ 283 (394)
T COG2814 211 PGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSA------VSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAAL 283 (394)
T ss_pred chHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhH------HHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHH
Confidence 344445555555555555555555 5666778899988 9999999999999999999999999 8898888887
Q ss_pred HHHHHHHHHhhc-cchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCC
Q 015396 120 ASVVIFNTLFGL-SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (407)
Q Consensus 120 ~~~~~~~~~~~~-~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 197 (407)
.+..+..+...+ .++.+..++.-++.|++.+..... ..-+++ .-++.+..+.+++....++|..+|..++|.+.+
T Consensus 284 ~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~-- 360 (394)
T COG2814 284 LLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLD-- 360 (394)
T ss_pred HHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 777666655554 556666667777777766554443 555566 446899999999999999999999999999999
Q ss_pred CCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhc
Q 015396 198 EKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFW 235 (407)
Q Consensus 198 ~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (407)
++++....++.++..++.++..+.
T Consensus 361 --------------~~g~~~~~~~~a~l~~~a~~~~~~ 384 (394)
T COG2814 361 --------------ALGYAATGWVGAALLLLALLLALL 384 (394)
T ss_pred --------------hhchHHHHHHHHHHHHHHHHHHHH
Confidence 555666667887777776655443
No 161
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.32 E-value=1.4e-11 Score=118.04 Aligned_cols=154 Identities=10% Similarity=0.056 Sum_probs=100.2
Q ss_pred hhhhHHHH-HHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCCh-------HHHHHHHHHHHHHHHHhhc
Q 015396 60 LFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRK-------PVIIMGTASVVIFNTLFGL 131 (407)
Q Consensus 60 ~~~~~~~~-~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr-------~~~~~~~~~~~~~~~~~~~ 131 (407)
....+|.+ .+++|.+..+ .+.+.+++.++..++.++.|+++||+||| .......++.++..++...
T Consensus 271 ~~~~~p~~l~~~~g~s~~~------a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~ 344 (476)
T PLN00028 271 MDNIIAEYFYDRFGLSLET------AGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGR 344 (476)
T ss_pred HHhHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcc
Confidence 34455644 5678999888 99999999999999999999999999865 2333334444444445555
Q ss_pred cchHHHHHHHHHHHhhhccchhH-HHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcccccccc
Q 015396 132 SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLF 210 (407)
Q Consensus 132 ~~~~~~l~~~r~l~G~~~g~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~~~ 210 (407)
.++.+..++..++.+++.+.... ..+++.+.. +++|+...|+.+.+..+|..++|.+.+ ..+
T Consensus 345 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~--------------- 407 (476)
T PLN00028 345 ANSLGAAIVVMILFSIFVQAACGATFGIVPFVS-RRSLGVISGLTGAGGNVGAVLTQLLFF-TGS--------------- 407 (476)
T ss_pred cchHHHHHHHHHHHHHHHHHhhhhhcccCcccC-hhhchhhhhhhhccccHHHHHHHHHHH-hcC---------------
Confidence 66666555555666665444333 355666654 478999999987766677766665543 111
Q ss_pred cCCCChhHHHHHHHHHHHHHHHHhccc
Q 015396 211 GKFPYFLPCLCISLFAFGVTIAAFWLP 237 (407)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (407)
..+|...+++.++..++..+..++++
T Consensus 408 -~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 408 -SYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred -CccHhhHHHHHHHHHHHHHHHHHhee
Confidence 22355555777766666666655554
No 162
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.31 E-value=4.9e-10 Score=107.64 Aligned_cols=153 Identities=12% Similarity=0.141 Sum_probs=114.0
Q ss_pred HHHHHhhcccccccchhhHHHHHHH-HHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHh---hcc-chHHHHH
Q 015396 65 YFMIKDFQIAKREEDIGSYAGYVGS-SFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF---GLS-VNFWMAV 139 (407)
Q Consensus 65 ~~~~~~~~~s~~~~~~~~~~g~~~~-~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~---~~~-~~~~~l~ 139 (407)
|.+.+++|.+.++ .++... ...++..++.++.|+++||+|+|+.+..+.++.++..+.+ +.. ++.+.+.
T Consensus 247 ~~l~~~~G~s~~~------~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~ 320 (491)
T PRK11010 247 TFLIRGVGFDAGE------VGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMG 320 (491)
T ss_pred HHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHH
Confidence 3445678999998 999874 5568999999999999999999998776665555443322 232 4555555
Q ss_pred HHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcccccccccCCCChhH
Q 015396 140 LTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLP 218 (407)
Q Consensus 140 ~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~ 218 (407)
+.-++..+..|...+. .++..+..+++.+++..++.+...++|..+++.++|++.+ .++|...
T Consensus 321 ~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~----------------~~G~~~~ 384 (491)
T PRK11010 321 AAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVE----------------AHGWPTF 384 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------HhChHHH
Confidence 5566666655554453 8888999999999999999999999999999999999998 4445555
Q ss_pred HHHHHHHHHHHHHHHhccccC
Q 015396 219 CLCISLFAFGVTIAAFWLPET 239 (407)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~e~ 239 (407)
+.+.++.+++.++....++++
T Consensus 385 f~~~~~~~l~~l~~~~~~~~~ 405 (491)
T PRK11010 385 YLFSVAAAVPGLLLLLVCRQT 405 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 577777777766666555554
No 163
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.31 E-value=1e-10 Score=108.84 Aligned_cols=172 Identities=17% Similarity=0.175 Sum_probs=123.5
Q ss_pred HHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHH
Q 015396 49 IVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTL 128 (407)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~ 128 (407)
.......+.+....+..++.++-|++..+ +-+.+....+...+..+++..+.||+|||+.++.+..+..+..++
T Consensus 278 ~~~qq~sGi~ai~~Yst~i~~~aG~~~~~------a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~ 351 (485)
T KOG0569|consen 278 SFAQQFSGINAIFFYSTSIFKTAGFTPEE------AQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLL 351 (485)
T ss_pred HHHHHhcCcceeHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Confidence 33334446666777777899999999998 889999999999999999999999999999999999999888877
Q ss_pred hhccc---h-H--H---HHHHHHHHHhhh--ccchhHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCC
Q 015396 129 FGLSV---N-F--W---MAVLTRFLLGSL--NGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (407)
Q Consensus 129 ~~~~~---~-~--~---~l~~~r~l~G~~--~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 197 (407)
+.... + . | ..+++.++..++ .|.....+-+.+|.+|++.|+.++++......+...+-...-..+.+
T Consensus 352 ~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~-- 429 (485)
T KOG0569|consen 352 MSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQN-- 429 (485)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 66531 1 1 1 123444444443 33333348899999999999999999988888888777666666655
Q ss_pred CCCCCcccccccccCCCChhHHHHHHHHHHH-HHHHHhccccCCCCC
Q 015396 198 EKYPNLFSSESLFGKFPYFLPCLCISLFAFG-VTIAAFWLPETLHRH 243 (407)
Q Consensus 198 ~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~ 243 (407)
.+ |- ..++...+..++ .+..++.+||++.+.
T Consensus 430 -----~~---------g~-~~filF~i~~~~~~i~~~~~lPETkgr~ 461 (485)
T KOG0569|consen 430 -----VI---------GP-YVFILFVIPLAIFLIYLYRYLPETKGRT 461 (485)
T ss_pred -----Hh---------cc-hhhHHHHHHHHHHHHHHHHhCcccCCCC
Confidence 22 21 112444444444 455677899998654
No 164
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.30 E-value=3.9e-11 Score=112.42 Aligned_cols=131 Identities=16% Similarity=0.097 Sum_probs=107.8
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhhccchhH-HHHHHhhh
Q 015396 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEI 162 (407)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~-~~~~~~~~ 162 (407)
.|...++..+...++.+..|++.||+|||+.+.++.++.++...+...+++.+.+++.+++.|++...... ...+..+.
T Consensus 256 ~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 335 (396)
T TIGR00882 256 FGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQ 335 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 78888888888899999999999999999999999988888888878888999999999999988655544 36677888
Q ss_pred ccccchhhhhHH-HHHHHHHHHHHHHHhhhhhcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHH
Q 015396 163 FREEHQALGLST-VSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVT 230 (407)
Q Consensus 163 ~~~~~r~~~~~~-~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~ 230 (407)
.+++.++...+. .+....+|..++|.++|++.+ ..+|+.++.+.++..++..
T Consensus 336 ~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~----------------~~G~~~~f~~~~~~~~i~~ 388 (396)
T TIGR00882 336 FDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYD----------------SIGFQGAYLVLGCIVLLFT 388 (396)
T ss_pred CCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHH----------------hcccHHHHHHHHHHHHHHH
Confidence 888888887766 578899999999999999998 4455555577666655543
No 165
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.29 E-value=5.3e-11 Score=111.27 Aligned_cols=159 Identities=15% Similarity=0.127 Sum_probs=111.8
Q ss_pred HHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHH-HHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHh
Q 015396 51 LCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFM-FGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF 129 (407)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~-~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~ 129 (407)
++............+.+.+|.|.++++ .|++..... ....++.++.|++.||+|+|+.+..+.++.++..+..
T Consensus 218 ~l~~~~~~~~~~~~~~~l~~~G~s~~~------ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~ 291 (390)
T TIGR02718 218 LLSAMTAVSGFGLSKLYLVDAGWPLEW------IGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLW 291 (390)
T ss_pred HHHHHHHHHHHHHhhHHHHhcCCCHHH------HHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 333344444455667777788999998 999888775 4666778999999999999999888776653332222
Q ss_pred hc------cchHHHHHHHHHHHhhhccchhHH-HHHHhhhccc-cchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCC
Q 015396 130 GL------SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFRE-EHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYP 201 (407)
Q Consensus 130 ~~------~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~ 201 (407)
.. .++.+.+.....+.+++.+...+. .+...+..++ +++++.+++.+...++|..+||.++|.+.+
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~------ 365 (390)
T TIGR02718 292 FAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTD------ 365 (390)
T ss_pred HHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH------
Confidence 11 233444445555666666666554 7777777765 889999999999999999999999999998
Q ss_pred CcccccccccCCCChhHHHHHHHHHHHHHH
Q 015396 202 NLFSSESLFGKFPYFLPCLCISLFAFGVTI 231 (407)
Q Consensus 202 ~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (407)
..++...+...++..++..+
T Consensus 366 ----------~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 366 ----------RFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred ----------HHccHHHHHHHHHHHHHHHH
Confidence 34455555666665555443
No 166
>PRK15075 citrate-proton symporter; Provisional
Probab=99.28 E-value=1.4e-10 Score=109.92 Aligned_cols=138 Identities=19% Similarity=0.166 Sum_probs=100.1
Q ss_pred HhhhhhhchhhhHHHHHHh-hcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHH-Hh
Q 015396 52 CTALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNT-LF 129 (407)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~-~~ 129 (407)
...........+.|.+.++ +|.+..+ .++....+.++..++.++.|+++||+|||+++..+.++..+..+ ..
T Consensus 249 ~~~~~~~~~~~~~p~~l~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~ 322 (434)
T PRK15075 249 MTTVSFYLITVYTPTFGKTVLHLSAAD------SLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPAL 322 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 3444555666778877654 7998887 88888888899999999999999999999998776544432221 11
Q ss_pred ---hccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHH-HHHHHHHHHHHHHhhhhhcC
Q 015396 130 ---GLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTV-STAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 130 ---~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~-~~~~~~g~~~~~~~~~~l~~ 195 (407)
...++...+.+..++.|++.+...+. ..++.|.+|+++|++++++. +.+..+++.++|.+.+++.+
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~ 393 (434)
T PRK15075 323 SWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIH 393 (434)
T ss_pred HHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHH
Confidence 12234444444455666666665554 77899999999999999986 44445567889999999998
No 167
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.28 E-value=1e-10 Score=110.04 Aligned_cols=129 Identities=12% Similarity=0.011 Sum_probs=101.8
Q ss_pred hhhhHHHH-HHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhcc-----c
Q 015396 60 LFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS-----V 133 (407)
Q Consensus 60 ~~~~~~~~-~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~-----~ 133 (407)
.....|.+ .+++|.++.+ .++......++..++.++.|+++||+|+|+.+..+.++..++.++.... +
T Consensus 234 ~~~~~p~~~~~~~g~~~~~------~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 307 (406)
T PRK15402 234 WIALSPVILISGEQLSSYE------YGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSH 307 (406)
T ss_pred HHHHhHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 33445544 5678888887 8888888888889999999999999999999988888777766655442 3
Q ss_pred hHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 134 NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 134 ~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
+.+.+++..++.|++.+...+. ..... ..++++|++..+..+....+|..+|+.+++.+.+
T Consensus 308 ~~~~~~~~~~~~g~g~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~ 369 (406)
T PRK15402 308 AYLWLTAGLSLYAFGIGLANAGLYRLTL-FSSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYL 369 (406)
T ss_pred cHHHHHHHHHHHHHHHHHHhhhHHHHHh-hhccccccHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 5667778888899988776554 44443 3345899999999999999999999999999987
No 168
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.27 E-value=1.9e-11 Score=116.06 Aligned_cols=145 Identities=14% Similarity=0.170 Sum_probs=108.8
Q ss_pred HHHHHHHHHhhhhhhchhhhHHHHHHh-hcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHH
Q 015396 44 FSIWIIVLCTALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (407)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~ 122 (407)
.......++............+.+.++ ++ +..+ .+++.+...++..++.+++++++||+|+|+++..+.++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~ 297 (437)
T TIGR00792 225 LILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPEL------FSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLM 297 (437)
T ss_pred HHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 333444444444444433344444432 23 3334 677778888999999999999999999999999998888
Q ss_pred HHHHHHhhcc-chHHHHHHHHHHHhhhccchhHH-HHHHhhhcc-------ccchhhhhHHHHHHHHHHHHHHHHhhhhh
Q 015396 123 VIFNTLFGLS-VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR-------EEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (407)
Q Consensus 123 ~~~~~~~~~~-~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~-------~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 193 (407)
+++.+...+. ++.+.+++..++.|++.+...+. .++++|..| ++++|...++.+....+|..+++.+.+.+
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~l 377 (437)
T TIGR00792 298 VLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLI 377 (437)
T ss_pred HHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8877766654 45677777788889988877665 888888865 55679999999999999999999999999
Q ss_pred cC
Q 015396 194 AQ 195 (407)
Q Consensus 194 ~~ 195 (407)
.+
T Consensus 378 l~ 379 (437)
T TIGR00792 378 LG 379 (437)
T ss_pred HH
Confidence 87
No 169
>TIGR00898 2A0119 cation transport protein.
Probab=99.27 E-value=4.8e-11 Score=115.59 Aligned_cols=136 Identities=21% Similarity=0.131 Sum_probs=103.9
Q ss_pred HHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhccchH--HHHHHHHHHHhhhccchhH-HHHHHhhhccc
Q 015396 89 SSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNF--WMAVLTRFLLGSLNGLLGP-IKAYACEIFRE 165 (407)
Q Consensus 89 ~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~r~l~G~~~g~~~~-~~~~~~~~~~~ 165 (407)
....+...++.++.+++.||+|||+.+.++.++.+++.++..+.++. +..++..++.+++.+...+ .+.+..|.+|+
T Consensus 362 ~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~ 441 (505)
T TIGR00898 362 FISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPT 441 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccH
Confidence 34456677888999999999999999999999888888777765543 4445555566666555555 48899999999
Q ss_pred cchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhccccCCCC
Q 015396 166 EHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHR 242 (407)
Q Consensus 166 ~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 242 (407)
+.|++++|+.+....+|.+++|.+.+ +.+ .++..++.+.++..++..+..+++||+...
T Consensus 442 ~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~lpet~~~ 500 (505)
T TIGR00898 442 VVRNLGVGVCSTMARVGSIISPFLVY-LGE-----------------KWLFLPLVLFGGLALLAGILTLFLPETKGV 500 (505)
T ss_pred HHHhhhHhHHHHHHHHHHHHHhHHHH-HHH-----------------HHHhhHHHHHHHHHHHHHHHHHcCcCCCCC
Confidence 99999999999999999999999998 432 234455566676666666666788887653
No 170
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.26 E-value=2.3e-10 Score=110.09 Aligned_cols=170 Identities=16% Similarity=0.129 Sum_probs=114.5
Q ss_pred hhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhccc--
Q 015396 56 PISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSV-- 133 (407)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~-- 133 (407)
+.+......|.+.++.|.+..+ .++......++..++.++.|+++||+|||++++.+.++.+++.++++...
T Consensus 286 ~~~~~~~~~p~i~~~~g~~~~~------~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~ 359 (479)
T PRK10077 286 GINVVLYYAPEIFKTLGASTDI------ALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYT 359 (479)
T ss_pred ChhHHHHHHHHHHHHcCCCCch------HHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhc
Confidence 3344455668888888988776 67777778888899999999999999999999999998888877665321
Q ss_pred h-HH-HHHHHHHHHhhhccc-hhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCccccccc
Q 015396 134 N-FW-MAVLTRFLLGSLNGL-LGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESL 209 (407)
Q Consensus 134 ~-~~-~l~~~r~l~G~~~g~-~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~~ 209 (407)
+ .+ ....+.++.+++.+. ..+. ..++.|.+|+++|++++++......+|..+++.+.+.+.+.. | .
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~--------~--~ 429 (479)
T PRK10077 360 QAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNS--------W--L 429 (479)
T ss_pred CcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcc--------c--h
Confidence 1 11 222233344443332 3354 899999999999999999999999999998877766554200 0 0
Q ss_pred ccCCCChhHHHHHHHHHHHHHHH-HhccccCCC
Q 015396 210 FGKFPYFLPCLCISLFAFGVTIA-AFWLPETLH 241 (407)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~ 241 (407)
...++++..+++.++..++..+. .++.||+++
T Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 462 (479)
T PRK10077 430 VAHFHNGFSYWIYGCMGVLAALFMWKFVPETKG 462 (479)
T ss_pred hhhccCccHHHHHHHHHHHHHHHHHhccccCCC
Confidence 00233444446666555544443 445666543
No 171
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.26 E-value=1.2e-10 Score=110.49 Aligned_cols=171 Identities=11% Similarity=0.038 Sum_probs=106.4
Q ss_pred HHHHHhhhhhhchhhhHHHHHHh-hcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHH---H
Q 015396 48 IIVLCTALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV---V 123 (407)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~---~ 123 (407)
...++............|.+.++ .|.++.+ .++....+.++..++.++.|+++||+++++....+.... .
T Consensus 258 ~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~------~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 331 (438)
T TIGR00712 258 IANVFVYLLRYGVLDWSPTYLKEVKHFALDK------SSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVT 331 (438)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHccCCChhh------HHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHH
Confidence 33344444444556677866654 6888888 899999999999999999999999997543222222221 1
Q ss_pred HHHHHhhc--cchHHHHHHHHHHHhhhccchhH-HHHHHhhhccccchhhhhHHHHHHHHHH-HHHHHHhhhhhcCCCCC
Q 015396 124 IFNTLFGL--SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIG-LIIGPALGGFLAQPAEK 199 (407)
Q Consensus 124 ~~~~~~~~--~~~~~~l~~~r~l~G~~~g~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g-~~~~~~~~~~l~~~~~~ 199 (407)
++.+.... ..+.+......++.|++...... ......|.+|+++|++++|+.+....+| .+++|.+.|.+.+
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~---- 407 (438)
T TIGR00712 332 IAVIVYWMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVD---- 407 (438)
T ss_pred HHHHHHHhcCCCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHH----
Confidence 22222112 23444444444555554222222 2456779999999999999998877776 5789999999998
Q ss_pred CCCcccccccccCCCChhHHHHHHHHHHHH-HHHHhccccCC
Q 015396 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETL 240 (407)
Q Consensus 200 ~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~ 240 (407)
..| |...+.+..+..++. +...+.+||.+
T Consensus 408 ---~~g---------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 408 ---FFG---------WDGGFMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred ---hcc---------chHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 333 344445555444443 33455566653
No 172
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.26 E-value=3e-10 Score=107.67 Aligned_cols=135 Identities=12% Similarity=0.073 Sum_probs=89.1
Q ss_pred hhhhhchhhhHHHHH-HhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHh---
Q 015396 54 ALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF--- 129 (407)
Q Consensus 54 ~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~--- 129 (407)
.........++|.+. +++|.+..+ .+...++..++..+++++.|+++||+|||+.+..+.++..+..+..
T Consensus 256 ~~~~~~~~~~lp~~l~~~~g~s~~~------~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~ 329 (432)
T PRK10406 256 SLCFYTFTTYMQKYLVNTAGMHANV------ASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSA 329 (432)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHH
Confidence 344455666778655 567888877 8888888888888999999999999999998877655443333211
Q ss_pred -hccchHHHHHHHHHHHhhhccchhH-HHHHHhhhccccchhhhhHHHHHHHH-HHHHHHHHhhhhhc
Q 015396 130 -GLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWG-IGLIIGPALGGFLA 194 (407)
Q Consensus 130 -~~~~~~~~l~~~r~l~G~~~g~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~-~g~~~~~~~~~~l~ 194 (407)
...++.+..+..-.+.++..+...+ ...+.+|++|++.|++++|+.+...+ +.+...|.+.+.+.
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~ 397 (432)
T PRK10406 330 LQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLK 397 (432)
T ss_pred HHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHH
Confidence 1122333222222222233333333 47789999999999999999865544 33445788887553
No 173
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.26 E-value=1.8e-10 Score=106.26 Aligned_cols=143 Identities=13% Similarity=0.042 Sum_probs=108.7
Q ss_pred HHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhccccc-CChHHHHHHHHHHHHHH
Q 015396 48 IIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-GRKPVIIMGTASVVIFN 126 (407)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-Grr~~~~~~~~~~~~~~ 126 (407)
+..++...........+|.+.++.|.+..+ .+...+...++..+++++.|++.||+ +||+.+..+.++.+++.
T Consensus 204 ~~~~~~~~~~~~~~~~lp~~~~~~g~~~~~------~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 277 (355)
T TIGR00896 204 VFFGLQSGLYYSLIGWLPAILISHGASAAT------AGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGL 277 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHH
Confidence 333344444555566788888888998888 99999999999999999999999999 56677777777777777
Q ss_pred HHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhcc-ccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCC
Q 015396 127 TLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR-EEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (407)
Q Consensus 127 ~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 197 (407)
+...+..+.+... ..++.|++.+...+. .+.+.+..+ +++++...++.+....+|..++|.+.|++.+..
T Consensus 278 ~~~~~~~~~~~~~-~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~ 349 (355)
T TIGR00896 278 CGLLFAPMHGLWA-WALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDIS 349 (355)
T ss_pred HHHHHhhhhHHHH-HHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6666654433222 346778888887765 666665554 567788899988888999999999999999843
No 174
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.25 E-value=4.3e-11 Score=111.19 Aligned_cols=145 Identities=16% Similarity=0.142 Sum_probs=102.4
Q ss_pred HHHHHHHHhhhhhhchhhhHHHHH-HhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccC-ChHHHH-HHH-H
Q 015396 45 SIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG-RKPVII-MGT-A 120 (407)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G-rr~~~~-~~~-~ 120 (407)
.+.+..+.............|.+. +++|.++.+ .++..+...++..++.++.|+++||.+ ||+... ... .
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~ 293 (379)
T TIGR00881 220 YISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEK------ASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMA 293 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHH
Confidence 344445555555555666677554 567988888 899999999999999999999999864 333222 222 2
Q ss_pred HHHHHHHHhhc--cchHHHHHHHHHHHhhhccchhH-HHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 121 SVVIFNTLFGL--SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 121 ~~~~~~~~~~~--~~~~~~l~~~r~l~G~~~g~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
...++...... ..+.+...+..++.|+......+ ...+..|.+|+++|+++.++.+....+|..++|.+.|.+.+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 371 (379)
T TIGR00881 294 LIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLAD 371 (379)
T ss_pred HHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHH
Confidence 22222222222 34555566666777765434333 47788999999999999999999999999999999999998
No 175
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.24 E-value=4.7e-10 Score=104.89 Aligned_cols=125 Identities=11% Similarity=0.004 Sum_probs=99.1
Q ss_pred HHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhccchHHHHHHHHH
Q 015396 64 LYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRF 143 (407)
Q Consensus 64 ~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 143 (407)
.|.+.+++|.+.++ .+++...+.++..++.++.|++.||.+++..+....+......++....++.+.+.+..+
T Consensus 240 ~p~~~~~~g~s~~~------~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 313 (394)
T PRK10213 240 RPVYMNLAGFGVDG------LTLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPLVLAVSALVLTLWGSDKIVATGVAI 313 (394)
T ss_pred HHHHHHhcCCChhH------HHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 36777888999888 899999999999999999999999965444344333334444455455677888888889
Q ss_pred HHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 144 LLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 144 l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
+.|++.+...+. .+++.+..| +++++..+......++|..+||.++|.+.+
T Consensus 314 l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~ 365 (394)
T PRK10213 314 IWGLTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALD 365 (394)
T ss_pred HHHHHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999988887775 778888887 556778888888889999999999999998
No 176
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.24 E-value=7.7e-11 Score=105.40 Aligned_cols=169 Identities=14% Similarity=0.152 Sum_probs=128.9
Q ss_pred HHHHHHHHHHHHhhhhhhchhhhHH-HHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhccccc--CChHHHHH
Q 015396 41 TELFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY--GRKPVIIM 117 (407)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~--Grr~~~~~ 117 (407)
+.++.++++.++.+..+..+.-+.| ++.|+.|.|..+ +++..+.+-.+.+.|.+++|+++||+ |||....+
T Consensus 252 k~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~------a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~ 325 (448)
T COG2271 252 KLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVK------ANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMAL 325 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHH------HHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHH
Confidence 4456788899999999999999999 556778999998 99999999999999999999999996 66655443
Q ss_pred -HHHHHHHHHHHhhccc--hHHHHHHHHHHHhhh-ccchhHHHHHHhhhccccchhhhhHHHHHHHHH-HHHHHHHhhhh
Q 015396 118 -GTASVVIFNTLFGLSV--NFWMAVLTRFLLGSL-NGLLGPIKAYACEIFREEHQALGLSTVSTAWGI-GLIIGPALGGF 192 (407)
Q Consensus 118 -~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~-~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~ 192 (407)
..++..++.+..-.++ |++...++.++.|+. .|....+-....|..|++--|++.|+...+..+ |.+.+....++
T Consensus 326 i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~ 405 (448)
T COG2271 326 IFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGY 405 (448)
T ss_pred HHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCccee
Confidence 4444444444444444 568888888888986 444444467788999999999999999888777 88899888899
Q ss_pred hcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHH
Q 015396 193 LAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTI 231 (407)
Q Consensus 193 l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (407)
+.+ .+||...| ++..+.++++.+
T Consensus 406 i~d-------~~gW~g~F---------i~~~~~a~l~~l 428 (448)
T COG2271 406 IAD-------TWGWDGGF---------IVLSIAALLAIL 428 (448)
T ss_pred eEe-------cCCCcchH---------HHHHHHHHHHHH
Confidence 988 45565554 555555544433
No 177
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.23 E-value=1.1e-10 Score=111.14 Aligned_cols=174 Identities=15% Similarity=0.225 Sum_probs=147.1
Q ss_pred HHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccC--ChHHHHHHHH
Q 015396 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG--RKPVIIMGTA 120 (407)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G--rr~~~~~~~~ 120 (407)
++.+.+...+..++.......+|.+.++.+.+..+ .+.+.++..+...++.+..|+++|+.. ++.+..++.+
T Consensus 300 fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~------aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll 373 (509)
T KOG2504|consen 300 FLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSND------AAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLL 373 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhh------hHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHH
Confidence 44566677777778888888899999999999999 999999999999999999999999988 4556677888
Q ss_pred HHHHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCC
Q 015396 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (407)
Q Consensus 121 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 199 (407)
..+++.....++++++.++...++.|+..|.+... ..++.|..+.++-..+.|+.....+++..+||+++|.+.+..++
T Consensus 374 ~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~ 453 (509)
T KOG2504|consen 374 IAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGN 453 (509)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCC
Confidence 88888889999999999999999999999998887 66899999999999999999999999999999999999884332
Q ss_pred CCCcccccccccCCCChhHHHHHHHHHHHHHHHHhccc
Q 015396 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLP 237 (407)
Q Consensus 200 ~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (407)
|...++..++..++....++..|
T Consensus 454 ---------------Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 454 ---------------YDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred ---------------eeeehhhcChHHHHHHHHHHHhH
Confidence 33344666666666665555555
No 178
>PRK10054 putative transporter; Provisional
Probab=99.23 E-value=1.5e-10 Score=108.36 Aligned_cols=111 Identities=16% Similarity=0.033 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhcc-chHHHHHHHHHHHhhhccchhHH-HHHHhh
Q 015396 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS-VNFWMAVLTRFLLGSLNGLLGPI-KAYACE 161 (407)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~ 161 (407)
.+++.+...+.....+++.|++.||+++|+.+..+.++..++.+...+. ++.+.+.+..++.|++.+...|. .+++.+
T Consensus 246 ~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~ 325 (395)
T PRK10054 246 VAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDH 325 (395)
T ss_pred HHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 7788888877777888899999999999999999988888887776654 57777777888999998777776 889999
Q ss_pred hccccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 162 IFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 162 ~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
..|++.|++..+..+ ...+|..+||.++|.+.+
T Consensus 326 ~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~ 358 (395)
T PRK10054 326 IAPPGMKASYFSAQS-LGWLGAAINPLVSGVILT 358 (395)
T ss_pred hCCcccceehHhHHH-HHHHHHHHHHHHHHHHHH
Confidence 999999999988655 556899999999999998
No 179
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.22 E-value=3.6e-10 Score=104.82 Aligned_cols=182 Identities=16% Similarity=0.274 Sum_probs=135.9
Q ss_pred HHHHHHHHHHHhhhhhhchhhhHHHHHHhhc-ccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHH
Q 015396 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQ-IAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (407)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (407)
++....+..++.......+....+.+.++.| .+... .+.+.++..++=++.-...+++..|+|.|+++.++.+
T Consensus 208 ~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~------~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~ 281 (400)
T PF03825_consen 208 RFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGST------IGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALV 281 (400)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhH------HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 3444555666667777788888888888888 56666 7877777778888888899999999999999999999
Q ss_pred HHHHHHHHhhcc-chHHHHHHH----HHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHH-HHHHHHHHHHHhhhhh
Q 015396 121 SVVIFNTLFGLS-VNFWMAVLT----RFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVST-AWGIGLIIGPALGGFL 193 (407)
Q Consensus 121 ~~~~~~~~~~~~-~~~~~l~~~----r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~~~~~~~~~l 193 (407)
..++=..+++.. ++.+...+. ..+.|+..+...+. ..++.+..|++.|+++.++++. ..++|..+|..++|++
T Consensus 282 ~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l 361 (400)
T PF03825_consen 282 AYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWL 361 (400)
T ss_pred HHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 999998888887 554443333 35689988887775 9999999999999999999855 6789999999999999
Q ss_pred cCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHH-HhccccC
Q 015396 194 AQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPET 239 (407)
Q Consensus 194 ~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~ 239 (407)
.+ .+|-+..+ .|...+.+.++..++..+. .++.+|+
T Consensus 362 ~~-------~~g~~~~~---~~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 362 YD-------AFGARGMF---DWSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred HH-------Hhcchhhh---hHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 98 45544433 1333334555544443333 3344443
No 180
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.21 E-value=3.1e-10 Score=101.71 Aligned_cols=172 Identities=14% Similarity=0.156 Sum_probs=134.9
Q ss_pred HHHHHHhhhhhhchhhhHHHHH-HhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHH
Q 015396 47 WIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIF 125 (407)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~ 125 (407)
.++.++..-+.+.+...-..+. .++|++..+ ..++.....+..+++++++|++.||+|.|+++..+.++..+.
T Consensus 258 LiA~~~~~DGv~til~~~~~fg~~~~gls~~~------lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~ 331 (438)
T COG2270 258 LIARFFYIDGVNTILAMGGVFGAADLGLSSTE------LLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIA 331 (438)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHcCccHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHH
Confidence 3334333333344444444444 599999999 999999999999999999999999999999999999999988
Q ss_pred HHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcc
Q 015396 126 NTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLF 204 (407)
Q Consensus 126 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~ 204 (407)
++...+......+.+.-.+.|...|..+.. .++.++.+|+++-++.+|+++.....+..+||.+-+.+.+.+++
T Consensus 332 ~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~----- 406 (438)
T COG2270 332 ALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGS----- 406 (438)
T ss_pred HHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcc-----
Confidence 887777766666777778899998887775 99999999999999999999999999999999999999985432
Q ss_pred cccccccCCCChhHHHHHHHHHHHHHHHHhccccC
Q 015396 205 SSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPET 239 (407)
Q Consensus 205 gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 239 (407)
-|..+....++..+.++.+..+|+.
T Consensus 407 ----------~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 407 ----------SRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred ----------hhhHHHHHHHHHHhhHhhEEeecCC
Confidence 2333355555555566666666655
No 181
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.17 E-value=4e-08 Score=89.46 Aligned_cols=177 Identities=18% Similarity=0.170 Sum_probs=129.4
Q ss_pred HHHHHHHHHhhhhhhchhhhH-HHHHHh-hcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHH
Q 015396 44 FSIWIIVLCTALPISSLFPFL-YFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (407)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~ 121 (407)
..++...|+..+- -.-|.+ |++.+. .|.+.+|. ..-+.-...-.+....++...+.|..|.|++++++.+.
T Consensus 8 ~llc~~gf~~~fr--PsEPfl~~yL~~~~kn~T~~qv-----~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~ 80 (412)
T PF01770_consen 8 LLLCLFGFFKEFR--PSEPFLTPYLTGPDKNFTEEQV-----NNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALS 80 (412)
T ss_pred HHHHHHHHHHhcC--CCCccchHHHcCCccCCCHHHH-----HHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 3444444444432 122444 344443 68887762 22344444555777888999999999999999999999
Q ss_pred HHHHHHHhhccchHHHHHHHHHHHhhhccchhHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCC
Q 015396 122 VVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYP 201 (407)
Q Consensus 122 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~ 201 (407)
..+...+..+.++.+.+-+..+.-|++.+.-.+-++++-...|+++-.++.+....+.-+|..++.++|..+...
T Consensus 81 ~i~t~~lll~~~sv~~mq~~q~~yg~~~a~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~----- 155 (412)
T PF01770_consen 81 YIITWLLLLFGTSVLAMQLMQFFYGLATAAEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSF----- 155 (412)
T ss_pred HHHHHHHHHHHCcHHHHHHHHHHHHHHHHHHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----
Confidence 999999999999999999999999999877666688888888998888999999999999999999999988761
Q ss_pred CcccccccccCCCChhHHHHHHHHHHHHHHHHhccccCCC
Q 015396 202 NLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLH 241 (407)
Q Consensus 202 ~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 241 (407)
+ ..++.....+......+.++..+++|..++
T Consensus 156 ---~------~~sy~~L~~isl~~~~~a~~~~~fLP~~~~ 186 (412)
T PF01770_consen 156 ---G------GVSYFQLNYISLASVSLALLIALFLPMPKR 186 (412)
T ss_pred ---c------CCCHHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 1 333444445555444555666677776554
No 182
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.17 E-value=8.2e-10 Score=102.93 Aligned_cols=123 Identities=13% Similarity=0.119 Sum_probs=91.2
Q ss_pred HHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhc-cchHHHHHHHHH
Q 015396 65 YFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL-SVNFWMAVLTRF 143 (407)
Q Consensus 65 ~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~r~ 143 (407)
|.+.+.+|.++.+ .++..+...++..++.++.|++.||+|+|+.+..+..+.+++.++... .++.+..++..+
T Consensus 224 ~~~~~~~g~s~~~------~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 297 (382)
T PRK10091 224 PYMMFISGFSETS------MTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAF 297 (382)
T ss_pred HHHHHhcCCCHHH------HHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 4555668998888 999999999999999999999999999999999888887777655543 455555566666
Q ss_pred HHhhhccc-hhHHH-HHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 144 LLGSLNGL-LGPIK-AYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 144 l~G~~~g~-~~~~~-~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
+.+++... ..+.. ....+..+++.++.+ ..+....+|..+||.++|++.+
T Consensus 298 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~ 349 (382)
T PRK10091 298 ICCAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLT 349 (382)
T ss_pred HHHHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHH
Confidence 66665433 33333 344444455555544 3466788999999999999988
No 183
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.17 E-value=1.1e-09 Score=98.64 Aligned_cols=145 Identities=16% Similarity=0.107 Sum_probs=108.2
Q ss_pred HHHHHHHHHHHhhhhhhchhhhHHHHHHh---hcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHH
Q 015396 42 ELFSIWIIVLCTALPISSLFPFLYFMIKD---FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (407)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~ 118 (407)
.+....+..++..........+.+.+.++ +|.++++ .++..+.+..+..++.+..+++.||+|+||.+.++
T Consensus 141 ~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~------a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~ 214 (310)
T TIGR01272 141 HLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQ------AAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFN 214 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 34444444444443555666677766643 5888888 99999999999999999999999999999999888
Q ss_pred HHHHHHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 119 TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
.++..++.++....++...+ ..-++.|++.+...|. .+...+..|++ .+++.++. ....+|+++.|++.|.+.+
T Consensus 215 ~~l~~~~~~l~~~~~~~~~~-~~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad 289 (310)
T TIGR01272 215 AFLAVLLSIGAALTHGYVAM-WFVLALGLFNSIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLAD 289 (310)
T ss_pred HHHHHHHHHHHHHcCCHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHH
Confidence 88887777666555544333 3455788888887775 88888877753 45556665 5667899999999999998
No 184
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.17 E-value=2.5e-09 Score=100.70 Aligned_cols=275 Identities=18% Similarity=0.203 Sum_probs=162.6
Q ss_pred hhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhccccc-----CChHHHHHHHHHHHHHHHHhhcc---
Q 015396 61 FPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-----GRKPVIIMGTASVVIFNTLFGLS--- 132 (407)
Q Consensus 61 ~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-----Grr~~~~~~~~~~~~~~~~~~~~--- 132 (407)
.+..|.+.+++|+++++ .....+...+.. ...++.|.++|-+ .||+.++++.++..++.+.++..
T Consensus 10 ~~~~~~l~~~l~ls~~~------~~~~~~~~~lPw-~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~ 82 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQ------LQRLSSLASLPW-SIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPAS 82 (433)
T ss_pred HHHHHHHHHHcCCCHHH------HHHHHHHHhCch-HHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccc
Confidence 45567888999999998 777777776664 4678999999976 35666677777776655555542
Q ss_pred -chHHHHHHHHHHHhhhccchhHH-HHHHhhhcc--ccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcccccc
Q 015396 133 -VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR--EEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSES 208 (407)
Q Consensus 133 -~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~--~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~ 208 (407)
.+.....+.-++..++.....++ -+++.|... ++.||...+.......+|.+++..++|.+.+ ..+.+.
T Consensus 83 ~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~-------~~~~~~ 155 (433)
T PF03092_consen 83 ESSAAIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLD-------SFGPQG 155 (433)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhh-------cCCCeE
Confidence 34555666667777777777765 888888873 3447888888889999999999999999988 334444
Q ss_pred cccCCCChhHHHHHHHHHHHHHHH-HhccccCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccccccccccccchhHHH
Q 015396 209 LFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSS 287 (407)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (407)
.| .+.+....+..+. .+..+|.+. .+..+. .... ++ ........-++.....++.++.+.++..
T Consensus 156 ~f---------~i~~~~~~l~~~~~~~~~~e~~~-~~~~~~-~~~~-~~---~~~~~~~~~~~~~~~l~~~~~~~~i~~~ 220 (433)
T PF03092_consen 156 VF---------LISAALPLLMLIVALFLLEERKV-RPADEV-FSFG-KE---EVPCLFGSFREQLSELWRALQQRAIWQP 220 (433)
T ss_pred Ee---------hHHHHHHHHHHHHHHHhhhhccc-cccchh-hccc-cc---ccchhhHHHHHHHHHHHHHHhhhHHHHH
Confidence 33 5555555554434 444444211 111100 0000 00 0000000001122244556667777776
Q ss_pred HH-HHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHHH
Q 015396 288 II-VYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIP 366 (407)
Q Consensus 288 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 366 (407)
.+ ..++.......... -..|...... .+-++++...+.+..+..++.+++.. +..+.-.+..-|++.....++..+
T Consensus 221 ~~~~~~~~~~~~~~~~a-~~fy~~~~~~-~gp~fs~~f~~~~~~vg~~~~l~g~~-~y~~~~~~~~~R~~~~~t~~~~~~ 297 (433)
T PF03092_consen 221 ILFFIFFFNLPPSISSA-SSFYFQTDAL-GGPHFSPSFYGTLSIVGSIASLLGIL-LYRKYFSNWSWRRIFVVTTLVSVL 297 (433)
T ss_pred HHHHHHHHHhccCCCCc-cEEEEEeccc-cccccCHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCCHHHHHHHHHHHHHH
Confidence 66 33333333222211 0112222111 13458999999888777777777765 555555556667776666655544
Q ss_pred H
Q 015396 367 L 367 (407)
Q Consensus 367 ~ 367 (407)
.
T Consensus 298 ~ 298 (433)
T PF03092_consen 298 A 298 (433)
T ss_pred H
Confidence 3
No 185
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.17 E-value=3e-10 Score=101.76 Aligned_cols=173 Identities=17% Similarity=0.191 Sum_probs=126.7
Q ss_pred HHHHHHHHHHHHhhhhhhchhhhHH-HHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHH
Q 015396 41 TELFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (407)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (407)
++.+.+.+.++...-..-.+...+| ++.++|+.++.+ .|.....+.+...+..+..|+++||+|.+|++....
T Consensus 218 ~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~------Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f 291 (417)
T COG2223 218 KDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVT------AGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVF 291 (417)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhh------HHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHH
Confidence 4455566666666666666777777 667899999999 999999999999999999999999999999999988
Q ss_pred HHHHHHHHHhhcc-------chHHHHHHHHHHHhhhccchhH-HHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhh
Q 015396 120 ASVVIFNTLFGLS-------VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGG 191 (407)
Q Consensus 120 ~~~~~~~~~~~~~-------~~~~~l~~~r~l~G~~~g~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 191 (407)
...+++..+.+.. .+....++..+..++..|.-.. ++.++..++|+ +-|.+.|+.....++|+..-|..-+
T Consensus 292 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~g 370 (417)
T COG2223 292 VGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFG 370 (417)
T ss_pred HHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHHh-hhhHHHHHHHHhccccccchhHHHH
Confidence 8888887777664 3444444444444444444333 36667777764 7788999999999999999998888
Q ss_pred hhcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhc
Q 015396 192 FLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFW 235 (407)
Q Consensus 192 ~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (407)
...+.++ .+...+++.....+++.+..+.
T Consensus 371 ~~~~~tg---------------~~~~~f~~~~~~~~~a~v~~~~ 399 (417)
T COG2223 371 VSLDLTG---------------SYTGAFMLLLAFYLVALVLTWA 399 (417)
T ss_pred HHHHhcc---------------cHHHHHHHHHHHHHHHHHHHHH
Confidence 8887332 2444556666665555554443
No 186
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.17 E-value=3.2e-10 Score=106.20 Aligned_cols=130 Identities=12% Similarity=0.053 Sum_probs=104.9
Q ss_pred hhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhccc-ccCChHHHHHHHHHHHHHHHHhhccchHHHHH
Q 015396 61 FPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD-RYGRKPVIIMGTASVVIFNTLFGLSVNFWMAV 139 (407)
Q Consensus 61 ~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~d-r~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~ 139 (407)
...+|.+.++.+.++.+ .+++.+...++...+..+.+++.| |++.|+.+..+.++.+++.++.+.+++++.+.
T Consensus 228 ~~~~p~~~~~~~~~~~~------~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 301 (400)
T PRK11646 228 MLMLPIMVNDIAGSPSA------VKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLF 301 (400)
T ss_pred HHhhhhhHHhhcCCchH------HHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 34567776776556666 888888877776666666677665 46667777788888888887777888888777
Q ss_pred HHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCC
Q 015396 140 LTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (407)
Q Consensus 140 ~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 196 (407)
+..++.|++.+...|. .+++.|..|+++|++++++.+....+|..+||.++|++.+.
T Consensus 302 ~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~ 359 (400)
T PRK11646 302 TLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDL 359 (400)
T ss_pred HHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHH
Confidence 7778888887777665 88999999999999999999999999999999999999984
No 187
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.16 E-value=1.2e-09 Score=92.32 Aligned_cols=152 Identities=20% Similarity=0.269 Sum_probs=112.3
Q ss_pred CCchHHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHH
Q 015396 37 GLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII 116 (407)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~ 116 (407)
..|.+.+..++..+-...+....+.+ ..+.+.+|+|+.+ .+.+.+.....+++.+++.|.++||+|++...+
T Consensus 263 ~ppfw~~~iicv~yyva~fPFi~lg~--~fF~~rfGlS~~~------a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv 334 (459)
T KOG4686|consen 263 YPPFWVLVIICVLYYVAWFPFITLGP--MFFQKRFGLSAVS------AGNILSTVYGISAVLSPVFGAISDKYGFNLWWV 334 (459)
T ss_pred CccHHHHHHHHHHHHHHHHHHhhhhH--HHHHHhhCCChhh------ccchhhhhhhhhhhhhhhHHHhHhhhcceehhH
Confidence 34555555555555444444333332 2678999999999 888888888888999999999999999998777
Q ss_pred HHHHHH-HHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhc
Q 015396 117 MGTASV-VIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (407)
Q Consensus 117 ~~~~~~-~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 194 (407)
.+..+. .++.-...++ .+.=+++..+.|+........ ...++...|+++.|++.|..+...++|.++.|+++|++.
T Consensus 335 ~~a~~~tl~~H~~l~Ft--~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~ 412 (459)
T KOG4686|consen 335 ASACILTLLGHSGLFFT--FLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIA 412 (459)
T ss_pred HHHHHHHHHHhhhHHhh--hccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheee
Confidence 654443 3443333332 222234556788877776664 888889999999999999999999999999999999999
Q ss_pred CCCC
Q 015396 195 QPAE 198 (407)
Q Consensus 195 ~~~~ 198 (407)
+..+
T Consensus 413 d~~g 416 (459)
T KOG4686|consen 413 DGDG 416 (459)
T ss_pred cCCC
Confidence 8544
No 188
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.15 E-value=2.2e-09 Score=91.83 Aligned_cols=134 Identities=13% Similarity=0.184 Sum_probs=108.2
Q ss_pred hhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhcc-
Q 015396 54 ALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS- 132 (407)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~- 132 (407)
....+.+..+-|.+++.+|.|.+| ...+.++..+|..+ .++.|.+.|++|++.++.++.+...++......+
T Consensus 15 ~Gt~Y~Fs~yS~~Lk~~l~~sq~~------l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~ 87 (250)
T PF06813_consen 15 SGTTYTFSAYSPQLKSRLGYSQSQ------LNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAV 87 (250)
T ss_pred cCcccchhhhhHHHHHHhCCCHHH------HHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 335567777788999999999999 99999999999876 5899999999999999999999999988766542
Q ss_pred ------chHHHHHHHHHHHhhhccchhH-HHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 133 ------VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 133 ------~~~~~l~~~r~l~G~~~g~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
.++|.+.+..++.|.+.+.... +.....+.|| ++||++.|+.-...++++.+-..+...+.+
T Consensus 88 ~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~ 156 (250)
T PF06813_consen 88 SGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFG 156 (250)
T ss_pred hCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcC
Confidence 4678888777888777666555 3566668887 589999999999889888877666665554
No 189
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.15 E-value=7.2e-10 Score=104.30 Aligned_cols=145 Identities=12% Similarity=0.124 Sum_probs=98.7
Q ss_pred HHHHHHHHhhhhhhchhhhHHHHHHhh--cccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHH-HHHHHHH
Q 015396 45 SIWIIVLCTALPISSLFPFLYFMIKDF--QIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPV-IIMGTAS 121 (407)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~-~~~~~~~ 121 (407)
......++.......+...+|.+.+++ +.+..+ .+...+...++..++.++.|+++||++||+. +....+.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~------~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~ 319 (412)
T TIGR02332 246 LYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIM------IGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLF 319 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH------hHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHH
Confidence 344444555556666778889888875 456666 8888999999999999999999999997774 3333334
Q ss_pred HHHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 122 VVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 122 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
..++..+....++....+++-.+.+++.....+. .....|.+|+++|++++|+.+....+|.+++|.+.+.+.+
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~ 394 (412)
T TIGR02332 320 AAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKD 394 (412)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccc
Confidence 4333322222223222222222223332222333 4555778999999999999999999999999999999998
No 190
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.15 E-value=6e-10 Score=104.62 Aligned_cols=149 Identities=14% Similarity=0.167 Sum_probs=100.3
Q ss_pred HHHHHhhcccccccchhhHHHHHHHHHH-HHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHh---hcc-chHHHHH
Q 015396 65 YFMIKDFQIAKREEDIGSYAGYVGSSFM-FGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF---GLS-VNFWMAV 139 (407)
Q Consensus 65 ~~~~~~~~~s~~~~~~~~~~g~~~~~~~-~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~---~~~-~~~~~l~ 139 (407)
+.+.+++|.++++ .+++.+... ++..++.++.|++.||+|+|+.+..+.++..+..+.. +.. ++.+.++
T Consensus 234 ~~l~~~~G~~~~~------~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~ 307 (402)
T PRK11902 234 TFLIRGAGFSAGE------VGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMA 307 (402)
T ss_pred HHHHHhcCCCHHH------HHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHH
Confidence 4566778999888 898876654 5678999999999999999998877776666554333 343 4556655
Q ss_pred HHHHH----HhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcccccccccCCC
Q 015396 140 LTRFL----LGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFP 214 (407)
Q Consensus 140 ~~r~l----~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~~~~~~~ 214 (407)
+.-++ .|++.+...+. ..++.+.+|.+++ ++.+...++|..+++.++|.+.+ +++
T Consensus 308 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~G~l~~----------------~~G 367 (402)
T PRK11902 308 LAIGIENLCGGMGTAAFVALLMALCNRSFSATQY----ALLSALASVGRVYVGPTSGYLVE----------------AYG 367 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHH----------------HhC
Confidence 55544 44444444554 6677777775554 45555567777777778999998 445
Q ss_pred ChhHHHHHHHHHHHHHHHHhccccC
Q 015396 215 YFLPCLCISLFAFGVTIAAFWLPET 239 (407)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~e~ 239 (407)
|+..+.+.++.+++.++.....+.+
T Consensus 368 ~~~~f~~~~~~~~~~~~~~~~~~~~ 392 (402)
T PRK11902 368 WPGFYLMTVVIALPGLALLWLMRGT 392 (402)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 5555577777776665555444433
No 191
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.14 E-value=7.8e-10 Score=105.94 Aligned_cols=176 Identities=17% Similarity=0.192 Sum_probs=112.9
Q ss_pred HHHHHHHHHHHhhhhhhchhhhHHHHH-HhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHH------
Q 015396 42 ELFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPV------ 114 (407)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~------ 114 (407)
.++..++..+........+...+|.+. +.+|.+..+ .++..++..++..++.++.|+++||+++|+.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~------~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~ 335 (465)
T TIGR00894 262 PVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKE------NGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAA 335 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHH------hHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHH
Confidence 344555666666666667777888554 668999888 9999999999999999999999999865421
Q ss_pred --HHHHHHHH--HHHHHHhhc-cchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHH
Q 015396 115 --IIMGTASV--VIFNTLFGL-SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPA 188 (407)
Q Consensus 115 --~~~~~~~~--~~~~~~~~~-~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 188 (407)
+..+.... .+..+.... ..+.+..++.-.+.+.+.+...+. .....|..| +.+|.++++.+....+|..++|.
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~ 414 (465)
T TIGR00894 336 RKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGLIAST 414 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111111 111111122 234444444445555544444443 445556666 48999999999999999999999
Q ss_pred hhhhhcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhccc
Q 015396 189 LGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLP 237 (407)
Q Consensus 189 ~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (407)
+.+.+.+.. + ...|...+.+.++..++..+.....+
T Consensus 415 l~g~~~~~~-------~------~~~~~~~f~~~~~~~~i~~i~~~~~~ 450 (465)
T TIGR00894 415 LAGNILSQD-------S------KNVWLIVFLIMAFVNILCVIFYLIFG 450 (465)
T ss_pred hhheeeCCC-------C------chHHHHHHHHHHHHHHHHHHHeeeee
Confidence 999888621 0 12255566777766666555544443
No 192
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.12 E-value=6.8e-10 Score=107.01 Aligned_cols=143 Identities=17% Similarity=0.130 Sum_probs=115.8
Q ss_pred HHHHHHhhhhhhchhhhHHHHH-HhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHH
Q 015396 47 WIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIF 125 (407)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~ 125 (407)
.+..++..+........+|.+. +.+|.++.+ .++......++..++.++.|++.||+|||+.+..+..+.+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~ 334 (485)
T TIGR00711 261 CVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQ------AGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVG 334 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHH
Confidence 3444444444444555677555 457999888 999999999999999999999999999999999998888888
Q ss_pred HHHhhc----cchHHHHHHHHHHHhhhccchhH-HHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 126 NTLFGL----SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 126 ~~~~~~----~~~~~~l~~~r~l~G~~~g~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
..+..+ ..+.+.+....++.|++.+...+ ......+..|+++|+++.++.+....+|..+|+.+.+.+.+
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~ 409 (485)
T TIGR00711 335 FYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILT 409 (485)
T ss_pred HHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777652 23566777778899999887655 47777788999999999999999999999999999988876
No 193
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.11 E-value=2.9e-10 Score=99.56 Aligned_cols=128 Identities=20% Similarity=0.275 Sum_probs=94.1
Q ss_pred HHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhh-ccchhHHHHHHhhhccccchhh
Q 015396 92 MFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSL-NGLLGPIKAYACEIFREEHQAL 170 (407)
Q Consensus 92 ~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~-~g~~~~~~~~~~~~~~~~~r~~ 170 (407)
.+.-..|.++.+++.||+|||+.+..+.+++++..++...+.+-....+..+..-++ .|.+.+++.|..|.+|...|+.
T Consensus 391 slaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRat 470 (528)
T KOG0253|consen 391 SLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRAT 470 (528)
T ss_pred HHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhc
Confidence 345577899999999999999999999999999988777665433222222222222 3445666899999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhccc
Q 015396 171 GLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLP 237 (407)
Q Consensus 171 ~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (407)
+.|....+..+|+++.|+++ ...+ -.-..+..+.+...++..+...++|
T Consensus 471 gvGtcSsmaRIggI~~p~iA-~~~e-----------------~s~sl~i~vy~~~~ilagIavcffP 519 (528)
T KOG0253|consen 471 GVGTCSSMARIGGIFSPVIA-MRAE-----------------LSTSLPIFVYGALFILAGIAVCFFP 519 (528)
T ss_pred chhhhhhHHhhhhhhhhHHH-HHhc-----------------cceeehHHHHHHHHHHHHHHheeee
Confidence 99999999999999999999 3332 1123344566666666666666666
No 194
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.10 E-value=9.7e-10 Score=101.46 Aligned_cols=132 Identities=15% Similarity=0.128 Sum_probs=102.5
Q ss_pred HHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHH-HHHHHhhhhhhhcccccCChHHHHHHHHH
Q 015396 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFM-FGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (407)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~-~~~~~~~~~~G~l~dr~Grr~~~~~~~~~ 121 (407)
++.+.+..++............|.+.+++|.+.++ .+.+.++.. ++..++.+++|++.||+|||+.+..+.++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~------~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~ 284 (356)
T TIGR00901 211 ALLLLLLIVLYKLGDSAATVLTTLFLLDMGFSKEE------IALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIV 284 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 33333444444555556667778777778998888 888887665 57789999999999999999998888888
Q ss_pred HHHHHHHhhcc-----------chHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHH
Q 015396 122 VVIFNTLFGLS-----------VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWG 180 (407)
Q Consensus 122 ~~~~~~~~~~~-----------~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~ 180 (407)
.+++..+..+. ++.+.+..+.++.+++.+...+. .+++.|.+|+++||+.+++.+...+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 285 QALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 77766654432 45677888888999998887775 9999999999999999999877654
No 195
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.07 E-value=7.4e-10 Score=101.86 Aligned_cols=136 Identities=21% Similarity=0.259 Sum_probs=111.1
Q ss_pred HHHHHHHhhhhhhchhhhHHHH-HHhhccc-ccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHH
Q 015396 46 IWIIVLCTALPISSLFPFLYFM-IKDFQIA-KREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVV 123 (407)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s-~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~ 123 (407)
.....+...+.........|.+ .+++|.+ ..+ .+...+...++..++.++.|+++||+|+|+..........
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 284 (352)
T PF07690_consen 211 LLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQ------AGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLI 284 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHH------HHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHhhcccchhhhhccCCCHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHH
Confidence 3334444444555577788876 7889999 667 8999999999999999999999999999888887777777
Q ss_pred HHHHHhhccc---hHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHH
Q 015396 124 IFNTLFGLSV---NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGP 187 (407)
Q Consensus 124 ~~~~~~~~~~---~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 187 (407)
+..+...... +....++..++.|++.+...+. .+++.|.+|+++|+++.++.+...++|..+||
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 285 LGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 7766665543 4567777888899988887775 99999999999999999999999999999987
No 196
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.07 E-value=2.7e-09 Score=113.68 Aligned_cols=134 Identities=13% Similarity=0.101 Sum_probs=114.2
Q ss_pred hhhchhhhHH-HHHHhhccccc-ccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhccc
Q 015396 56 PISSLFPFLY-FMIKDFQIAKR-EEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSV 133 (407)
Q Consensus 56 ~~~~~~~~~~-~~~~~~~~s~~-~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~ 133 (407)
........+| .+.+.+|.+.. + .+++.+...++.++++++.|+++||+++|+.+.++.++.+++.++..+..
T Consensus 247 ~~~~~~~~~~~~~~~~~g~s~~~~------~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (1146)
T PRK08633 247 ISQLAQANFPAYAKEVLGLDNTFQ------VQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAP 320 (1146)
T ss_pred HHHHHHHhhHHHHHHHhCCCcHHH------HHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhh
Confidence 3334445555 44567898888 7 89999999999999999999999999999999888888888888888888
Q ss_pred hHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 134 NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 134 ~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
+.+.+++..++.|++.+...+. .+++.+..|++.|++++++.++...+|.++++.+++.+..
T Consensus 321 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~ 383 (1146)
T PRK08633 321 SLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSG 383 (1146)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888899999988876665 8999999999999999999999999999888888877653
No 197
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.06 E-value=1.9e-09 Score=103.94 Aligned_cols=142 Identities=17% Similarity=0.131 Sum_probs=113.7
Q ss_pred HHHHHhhhhhhchhhhHHHH-HHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHH
Q 015396 48 IIVLCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFN 126 (407)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~ 126 (407)
+..+.............|.+ ++.+|.++.+ .|+......++..++.++.|++.||+|+|+.+..+.++..++.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~------ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~ 339 (495)
T PRK14995 266 VMAMTAMITLVGFELLMAQELQFVHGLSPLE------AGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSF 339 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHH
Confidence 33333344444445566644 4567999988 9999999999999999999999999999999988888877776
Q ss_pred HHhhc---cchHHHHHHHHHHHhhhccchhH-HHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 127 TLFGL---SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 127 ~~~~~---~~~~~~l~~~r~l~G~~~g~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
++... .++.+...+..++.|++.|...+ ....+.+..|+++++.+.++.+....+|..+|+.+.+.+.+
T Consensus 340 ~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 340 YGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55433 34566667778899999888666 47788888999999999999999999999999999988865
No 198
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.05 E-value=2.8e-09 Score=100.90 Aligned_cols=149 Identities=18% Similarity=0.211 Sum_probs=123.4
Q ss_pred HHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHH
Q 015396 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (407)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (407)
+.+..+....++............+++.++.--+++. .+.+..+..++..++.+++++++||+|+|+.+..+.+
T Consensus 225 r~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~~------~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~ 298 (428)
T PF13347_consen 225 RPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNEGL------ISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLL 298 (428)
T ss_pred chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCchh------hHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHH
Confidence 3445566666777777777777777776654333345 7888889999999999999999999999999999999
Q ss_pred HHHHHHHHhhccc--hHHHHHHHHHHHhhhccchhHH-HHHHhhhccc-------cchhhhhHHHHHHHHHHHHHHHHhh
Q 015396 121 SVVIFNTLFGLSV--NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFRE-------EHQALGLSTVSTAWGIGLIIGPALG 190 (407)
Q Consensus 121 ~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~-------~~r~~~~~~~~~~~~~g~~~~~~~~ 190 (407)
+.+++.++..+.+ |.+.+++..++.|++.+...+. .++++|..+. ++.|..++..+....+|..+++.+.
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~ 378 (428)
T PF13347_consen 299 LAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIV 378 (428)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHH
Confidence 9999998888775 9999999999999998887775 8999998873 3458889999999999999999999
Q ss_pred hhhcC
Q 015396 191 GFLAQ 195 (407)
Q Consensus 191 ~~l~~ 195 (407)
+.+.+
T Consensus 379 g~~l~ 383 (428)
T PF13347_consen 379 GLLLA 383 (428)
T ss_pred HHHHH
Confidence 98886
No 199
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.05 E-value=9.2e-09 Score=95.02 Aligned_cols=143 Identities=12% Similarity=0.056 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCC---hHHHHH-
Q 015396 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGR---KPVIIM- 117 (407)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Gr---r~~~~~- 117 (407)
.++.+....++.......+..++|.+.++.|.+. + .+...++..+...++ .++++||.+| |+....
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~-~------~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~ 262 (368)
T TIGR00903 193 DLWIIGAILGFGVALFDNLAIWLEAALRPAGLED-I------AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRA 262 (368)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCh-H------HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHH
Confidence 3455555666666667777788998888877664 3 455555555544444 4677777654 333332
Q ss_pred HHHHHHHHHHHhhccchHHHHHHHHHHHhhhccchhH-HHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhc
Q 015396 118 GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (407)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 194 (407)
..++.++.....+...+.+..++.-.+.|++.....+ .+++.+|.+|++.|++++|+.+....+|+.++|++.+.+.
T Consensus 263 ~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~ 340 (368)
T TIGR00903 263 AALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFI 340 (368)
T ss_pred HHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHh
Confidence 3344444444445555554445555666666555555 4889999999999999999999999999999999888776
No 200
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.05 E-value=3.5e-09 Score=98.77 Aligned_cols=125 Identities=18% Similarity=0.255 Sum_probs=93.1
Q ss_pred chhhhHHHH-HHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhcc-----
Q 015396 59 SLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS----- 132 (407)
Q Consensus 59 ~~~~~~~~~-~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~----- 132 (407)
......|.+ .+++|.++.+ .+++.+...++..++.++.|++.||+|||+.+..+..+..++.+++...
T Consensus 224 ~~~~~~~~~~~~~~g~~~~~------~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (385)
T TIGR00710 224 AFFSGAPFVYIDIMGVSPSV------FGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGL 297 (385)
T ss_pred HHHHcChHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 334445644 4578988888 9999999999999999999999999999999988877777766555442
Q ss_pred chHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHH-HHHHHHHHhh
Q 015396 133 VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWG-IGLIIGPALG 190 (407)
Q Consensus 133 ~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~-~g~~~~~~~~ 190 (407)
++.+.+++..++.|++.+...+. .....|..| ++|+++.++.+.... +|.+.+|.++
T Consensus 298 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~ 356 (385)
T TIGR00710 298 GSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVS 356 (385)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 23445555667788887776665 777788776 679999999876654 4555555554
No 201
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=99.04 E-value=9.6e-09 Score=92.84 Aligned_cols=147 Identities=21% Similarity=0.315 Sum_probs=110.1
Q ss_pred HHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhccc----ccCChHHHH
Q 015396 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD----RYGRKPVII 116 (407)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~d----r~Grr~~~~ 116 (407)
+.++.+....+...++...-..+.+++.+++|++..- .+.+-....+...+.+|+.|..+| |+||||.++
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~lGvphk~------~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI 105 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQSLGVPHKW------SSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFI 105 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHHcCCCccc------ccccccccccccceecccccccccccccccccccchH
Confidence 5666666666777777777788888999999999887 777777777888899999999999 589988776
Q ss_pred HH-HHHHHHHHHHhhccchHH-----------------HHHHHHHHHhhhc-cchhHHHHHHhhhccccchhh-hhHHHH
Q 015396 117 MG-TASVVIFNTLFGLSVNFW-----------------MAVLTRFLLGSLN-GLLGPIKAYACEIFREEHQAL-GLSTVS 176 (407)
Q Consensus 117 ~~-~~~~~~~~~~~~~~~~~~-----------------~l~~~r~l~G~~~-g~~~~~~~~~~~~~~~~~r~~-~~~~~~ 176 (407)
.. .+...++.++..++.++. .++++--+.-++. -...|+.+++.|...++++.+ +++.+.
T Consensus 106 ~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~ 185 (498)
T KOG0637|consen 106 LAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFS 185 (498)
T ss_pred HHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHH
Confidence 54 455566666666655432 2333333333444 345668999999998777777 999999
Q ss_pred HHHHHHHHHHHHhhhhh
Q 015396 177 TAWGIGLIIGPALGGFL 193 (407)
Q Consensus 177 ~~~~~g~~~~~~~~~~l 193 (407)
...++|+.+|..+++++
T Consensus 186 ~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 186 FFMAVGNVLGYALGSYL 202 (498)
T ss_pred HHHHhcceeeeeccccc
Confidence 99999999998888644
No 202
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.04 E-value=3.9e-09 Score=98.76 Aligned_cols=123 Identities=11% Similarity=0.033 Sum_probs=84.2
Q ss_pred hHH-HHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhccchHHHHHHH
Q 015396 63 FLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLT 141 (407)
Q Consensus 63 ~~~-~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 141 (407)
..| .+.+++|.++.+ .+...+...++..++.++.|++.||+|||+.+..+.++..++.++..+.++.+..+..
T Consensus 225 ~~~~~~~~~~g~~~~~------~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (392)
T PRK10473 225 TSPVLLMEQMGFSRGE------YAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFG 298 (392)
T ss_pred hCHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334 345678888887 8999999999999999999999999999999999998888888777776655544444
Q ss_pred HHHHhhhccchhHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 142 RFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 142 r~l~G~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
-.+.+.+.+...+ .....+..|.++|+ +.......++..+++.+++++.+
T Consensus 299 ~~l~~~g~~~~~~-~~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~ 348 (392)
T PRK10473 299 ITLICAGFSVGFG-VAMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAA 348 (392)
T ss_pred HHHHHHHHHHHhH-HHHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444443333222 12233444544443 34444556677777777777776
No 203
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.03 E-value=3.6e-09 Score=112.52 Aligned_cols=144 Identities=13% Similarity=0.067 Sum_probs=113.4
Q ss_pred HHHHHHHhhhhhhchhhhHHHHH-HhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHH
Q 015396 46 IWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (407)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~ 124 (407)
..+..+...+....+...+|.+. +.+|.+..+ .|++.+.+.++.++++++.|+++|+.++++.+..+.++.++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~------~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~ 303 (1140)
T PRK06814 230 AILGISWFWLVGAVVLSQLPLLAKETLGGDENV------ATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGL 303 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHH------HHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHH
Confidence 33334444444445555677655 457998888 99999999999999999999999988877766666555555
Q ss_pred HHHHhhcc--------------------chHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHH
Q 015396 125 FNTLFGLS--------------------VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGL 183 (407)
Q Consensus 125 ~~~~~~~~--------------------~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 183 (407)
+.+...+. .+.+.+++..++.|++.+...+. .+++.+.+|++.||+++|..++...+|.
T Consensus 304 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~ 383 (1140)
T PRK06814 304 FGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFM 383 (1140)
T ss_pred HHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHH
Confidence 44433332 67778888889999988887764 9999999999999999999999999999
Q ss_pred HHHHHhhhhhcC
Q 015396 184 IIGPALGGFLAQ 195 (407)
Q Consensus 184 ~~~~~~~~~l~~ 195 (407)
.+++++.+.+.+
T Consensus 384 ~ig~~~~g~l~~ 395 (1140)
T PRK06814 384 VAGTIILALLQA 395 (1140)
T ss_pred HHHHHHHHHHHH
Confidence 999999999874
No 204
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.02 E-value=4.9e-09 Score=95.90 Aligned_cols=142 Identities=25% Similarity=0.287 Sum_probs=117.5
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhh
Q 015396 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEI 162 (407)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~ 162 (407)
.|.+.+...+.-++...+..++.+|+|.|+.++++..+..+=.+.++++++.+.+.+.+.+.|+-.+..... ..|+++.
T Consensus 261 ~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~ 340 (412)
T PF01306_consen 261 YGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAH 340 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 899999999999999999999999999999999999999999999999999999999999999988887775 9999999
Q ss_pred ccccchhhhhHHH-HHHHHHHHHHHHHhhhhhcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHH-HHHhccccCC
Q 015396 163 FREEHQALGLSTV-STAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETL 240 (407)
Q Consensus 163 ~~~~~r~~~~~~~-~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~ 240 (407)
+|+|..++...+. +....+|..+.+.++|.+.| +.|++..+++.+.+.++.. +..+.+++++
T Consensus 341 fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd----------------~~G~~~tylimg~iv~~~~li~~f~l~~~~ 404 (412)
T PF01306_consen 341 FDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYD----------------RIGFQHTYLIMGLIVLPFTLISAFTLKKDK 404 (412)
T ss_dssp S-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHHHHHHHHHS--SS
T ss_pred CCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHh----------------hcCcHHHHHHHHHHHHHHHHHheeeecCCC
Confidence 9999888888875 78899999999999999999 5566666677776666544 4455565544
Q ss_pred C
Q 015396 241 H 241 (407)
Q Consensus 241 ~ 241 (407)
+
T Consensus 405 ~ 405 (412)
T PF01306_consen 405 K 405 (412)
T ss_dssp S
T ss_pred c
Confidence 3
No 205
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.01 E-value=6.6e-09 Score=97.27 Aligned_cols=146 Identities=21% Similarity=0.157 Sum_probs=96.4
Q ss_pred HHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHH
Q 015396 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (407)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~ 122 (407)
.+.+++.+++.+.....+...+|.+.++ ..+... ......+..+...+..+++|+++||+|+||++.++.+..
T Consensus 254 ~Wllslly~~tFG~fvg~s~~lp~~~~~-~~~~~~------~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~ 326 (462)
T PRK15034 254 LWLLSLLYLATFGSFIGFSAGFAMLAKT-QFPDVN------ILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFM 326 (462)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHH-HcChHH------HHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHH
Confidence 4445555555555555556667766544 222222 223334456777889999999999999999999888777
Q ss_pred HHHHHHhh--c----cchHHHHHHHHHHHhhhccchhH-HHHHHhhhccc---------------------cchhhhhHH
Q 015396 123 VIFNTLFG--L----SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFRE---------------------EHQALGLST 174 (407)
Q Consensus 123 ~~~~~~~~--~----~~~~~~l~~~r~l~G~~~g~~~~-~~~~~~~~~~~---------------------~~r~~~~~~ 174 (407)
.++..... . ..+++.+.+..+...++.|.... .+.++.+.+|+ ++-|.+.|+
T Consensus 327 ~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~ 406 (462)
T PRK15034 327 AIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGF 406 (462)
T ss_pred HHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHH
Confidence 76653321 1 13566666665555555555444 47777777764 145678888
Q ss_pred HHHHHHHHHHHHHHhhhhhcC
Q 015396 175 VSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 175 ~~~~~~~g~~~~~~~~~~l~~ 195 (407)
......+|+.+-|.+-+...+
T Consensus 407 v~a~G~~Ggf~~p~~~g~~~~ 427 (462)
T PRK15034 407 ISAIGAVGGFFIPQAFGMSLN 427 (462)
T ss_pred HHHHHHcccchhhHHHHHHHH
Confidence 888999999999988777776
No 206
>PRK11043 putative transporter; Provisional
Probab=99.01 E-value=1.1e-08 Score=96.15 Aligned_cols=129 Identities=11% Similarity=0.036 Sum_probs=96.6
Q ss_pred hhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHh---hc--cch
Q 015396 60 LFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF---GL--SVN 134 (407)
Q Consensus 60 ~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~---~~--~~~ 134 (407)
+....|.+.+++|.++.+ .|+......++..++.+..+++.||+|+|+.+....+..+++.+.. .. .++
T Consensus 222 ~~~~~p~~~~~~g~s~~~------~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (401)
T PRK11043 222 WLTGSPFILEQMGYSPAD------IGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPS 295 (401)
T ss_pred HHHHhHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCc
Confidence 344567777888998888 8888888888889999999999999999987655554444433222 11 345
Q ss_pred HHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 135 FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 135 ~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
.+.+++...+.|++.+...+. .+...|..| ++|+++.++.+.....+..+++.+.+.+.+
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~ 356 (401)
T PRK11043 296 LVPLLIPFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALIS 356 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 555666667778877776664 666667665 689999999998888888888888888876
No 207
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.00 E-value=1.7e-08 Score=94.31 Aligned_cols=122 Identities=13% Similarity=0.095 Sum_probs=99.3
Q ss_pred HHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHH
Q 015396 66 FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLL 145 (407)
Q Consensus 66 ~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 145 (407)
...+.+|.++.+ .|++.+...++..++++..+++.||.++|+++..+.. .++..+..++.++++...+..++.
T Consensus 231 ~~~~~lg~s~~~------~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~ 303 (393)
T PRK11195 231 WAPVALGITLNQ------PAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQHSLLPAYPLLILI 303 (393)
T ss_pred HHHHHcCCChhH------HHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHHhHHHHHHHHHHHH
Confidence 345568999888 9999999999999999999999999999988887753 344444555667777777778889
Q ss_pred hhhccchhH-HHHHHhhhccccc-hhhhhHHHHHHHHHHHHHHHHhhhhhc
Q 015396 146 GSLNGLLGP-IKAYACEIFREEH-QALGLSTVSTAWGIGLIIGPALGGFLA 194 (407)
Q Consensus 146 G~~~g~~~~-~~~~~~~~~~~~~-r~~~~~~~~~~~~~g~~~~~~~~~~l~ 194 (407)
|++.+...+ ..+.+.+..|++. +|++.++.+....+|..++..+.+.+.
T Consensus 304 G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~ 354 (393)
T PRK11195 304 GALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLV 354 (393)
T ss_pred HHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 998887666 4777778766554 799999999999999999999998664
No 208
>PRK09848 glucuronide transporter; Provisional
Probab=99.00 E-value=2.6e-09 Score=101.85 Aligned_cols=146 Identities=16% Similarity=0.133 Sum_probs=106.7
Q ss_pred HHHHHHHHHhhhhhhchhhhHHHHHH-hhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHH
Q 015396 44 FSIWIIVLCTALPISSLFPFLYFMIK-DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (407)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~ 122 (407)
....+..++............|.+.+ .+|.+... .++......++..++.++++++.||+|+|+++..+.++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~ 304 (448)
T PRK09848 231 FMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLF------TVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLG 304 (448)
T ss_pred HHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 33344444444444444445554443 45654433 444444446777889999999999999999999999888
Q ss_pred HHHHHHhhcc--chHHHHHHHHHHHhhhccchhHH-HHHHhhhcccc-------chhhhhHHHHHHHHHHHHHHHHhhhh
Q 015396 123 VIFNTLFGLS--VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE-------HQALGLSTVSTAWGIGLIIGPALGGF 192 (407)
Q Consensus 123 ~~~~~~~~~~--~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~-------~r~~~~~~~~~~~~~g~~~~~~~~~~ 192 (407)
.++.+...+. .+.+.+++..++.|++.+...+. .++.+|..|.+ ++|...+..+....+|..+|+.+.+.
T Consensus 305 ~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~ 384 (448)
T PRK09848 305 TCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAF 384 (448)
T ss_pred HHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8877766654 36677777788889988887775 88888888754 45888999999999999999999999
Q ss_pred hcC
Q 015396 193 LAQ 195 (407)
Q Consensus 193 l~~ 195 (407)
+.+
T Consensus 385 ~l~ 387 (448)
T PRK09848 385 ILG 387 (448)
T ss_pred HHH
Confidence 876
No 209
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.98 E-value=2.8e-07 Score=90.50 Aligned_cols=160 Identities=15% Similarity=0.140 Sum_probs=115.3
Q ss_pred chhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccc-cCChHHHHHHHHHHHHHHHHhhccch---
Q 015396 59 SLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVIIMGTASVVIFNTLFGLSVN--- 134 (407)
Q Consensus 59 ~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr-~Grr~~~~~~~~~~~~~~~~~~~~~~--- 134 (407)
+...+..++.+.+|.+.++ +..+...+....-+..++.|+++|+ +||++.+.++.++..++..+.++...
T Consensus 6 m~aiLvlYl~~~lg~~~~~------A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~ 79 (654)
T TIGR00926 6 MRTILVLYFLNFLGFSEST------STVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSS 79 (654)
T ss_pred cHHHHHHHHHHHcCCcHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCccc
Confidence 3444555667778888887 7777777777777889999999996 69999999999999998887766421
Q ss_pred -----HHHHHHHHHHHhhhccchhHH-HHHHhhhcccc---chhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCccc
Q 015396 135 -----FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE---HQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFS 205 (407)
Q Consensus 135 -----~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~---~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~g 205 (407)
....+++-.+..+|.|..-++ .+...|.++++ +|-..+.++..+.++|+.+++.+.+++.+..+.+..
T Consensus 80 ~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~--- 156 (654)
T TIGR00926 80 GHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGC--- 156 (654)
T ss_pred ccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc---
Confidence 223555666777788888776 88999998754 366788888999999999999999988752111000
Q ss_pred ccccccCCCChhHHHHHHHHHHHHHHHH
Q 015396 206 SESLFGKFPYFLPCLCISLFAFGVTIAA 233 (407)
Q Consensus 206 w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (407)
..+|...+.+.++..++.++..
T Consensus 157 ------~~~~~~aF~i~~i~m~ia~lvf 178 (654)
T TIGR00926 157 ------QDCYPLAFGVPAILMILALIVF 178 (654)
T ss_pred ------CcchHHHHHHHHHHHHHHHHHH
Confidence 2346666666666655555443
No 210
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.96 E-value=1.5e-08 Score=94.31 Aligned_cols=131 Identities=17% Similarity=0.165 Sum_probs=87.2
Q ss_pred hhhhhchhhhHH-HHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhh--
Q 015396 54 ALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG-- 130 (407)
Q Consensus 54 ~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~-- 130 (407)
......+....| .+.+++|.++.+ .++..+...++..++.++.|++.||+|||+.+..+..+..+..+...
T Consensus 207 ~~~~~~~~~~~~~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~ 280 (377)
T PRK11102 207 FAGMFSFLTAGPFVYIELNGVSPQN------FGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVS 280 (377)
T ss_pred HHHHHHHHHcCHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHH
Confidence 333334444445 455668999888 99999999999999999999999999999998888765444332221
Q ss_pred -c-cchHHHHHHHHHHHhhhccchhH-HHHHHhhhccccchhhhhHHHHH-HHHHHHHHHHHhhh
Q 015396 131 -L-SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVST-AWGIGLIIGPALGG 191 (407)
Q Consensus 131 -~-~~~~~~l~~~r~l~G~~~g~~~~-~~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~~~~~~~~ 191 (407)
. ..+.+.+.++..+.+.+.+.... ...++.|..| ++|+++.+..+. ...+|..+++++++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 281 ALLDLGFWALVVGVAAFVGCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLSL 344 (377)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 22445544444444444444333 3566777766 789999888744 35566777776654
No 211
>PRK10133 L-fucose transporter; Provisional
Probab=98.96 E-value=1.2e-08 Score=96.69 Aligned_cols=125 Identities=11% Similarity=0.047 Sum_probs=97.9
Q ss_pred hhHHHH-H-HhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhccchHHHHH
Q 015396 62 PFLYFM-I-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAV 139 (407)
Q Consensus 62 ~~~~~~-~-~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~ 139 (407)
.+.+.+ . +.+|.++.+ .++....+.++..++.++.|++.||+|+|+++..+.++..++..+..+.++.+ .+
T Consensus 279 ~~~~~~l~~~~~g~s~~~------ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~ 351 (438)
T PRK10133 279 SYLIRYAVEEIPGMTAGF------AANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GL 351 (438)
T ss_pred HHHHHHHhhhcCCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HH
Confidence 344533 3 467999998 99999999999999999999999999999999888877777666655555543 24
Q ss_pred HHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 140 LTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 140 ~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
..-.+.|++.+...|. .+...|..|+ +.+.+.++... ..+|..++|.+.|.+.+
T Consensus 352 ~~~~l~glg~~~i~P~~~s~a~~~~~~-~~~~as~l~~~-~~~g~~~~~~i~G~l~~ 406 (438)
T PRK10133 352 IALTLCSAFMSIQYPTIFSLGIKNLGQ-DTKYGSSFIVM-TIIGGGIVTPVMGFVSD 406 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccch-hhccchhHHhH-HhccchHHHHHHHHHHH
Confidence 5567889998888885 8888888775 45667777754 44688889999999987
No 212
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.96 E-value=7.7e-09 Score=99.18 Aligned_cols=148 Identities=11% Similarity=0.048 Sum_probs=105.8
Q ss_pred HHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHH
Q 015396 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (407)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~ 121 (407)
.+..+....++............+++.+....+.+. .+++.+...++.+++.+++++++||+|+|+.+.++.++
T Consensus 232 ~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~------~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~ 305 (473)
T PRK10429 232 QLSCLLGMALAYNIASNIINGFAIYYFTYVIGDADL------FPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIF 305 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHhhheeeEEEEECCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHH
Confidence 334444444444455555555555555444333344 66777777788899999999999999999999888877
Q ss_pred HHHHHHHhhc-----cchHHHHHHHHHHHhhhccchhHH-HHHHhhhcc-------ccchhhhhHHHHHHHHHHHHHHHH
Q 015396 122 VVIFNTLFGL-----SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR-------EEHQALGLSTVSTAWGIGLIIGPA 188 (407)
Q Consensus 122 ~~~~~~~~~~-----~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~-------~~~r~~~~~~~~~~~~~g~~~~~~ 188 (407)
..++.+.... ..+.+.+++.-++.|++.+...+. .++++|..| +++.|..++......-+|..+++.
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~ 385 (473)
T PRK10429 306 PVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAF 385 (473)
T ss_pred HHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHH
Confidence 6665544322 345677777778888887776665 889999866 334456888899999999999999
Q ss_pred hhhhhcC
Q 015396 189 LGGFLAQ 195 (407)
Q Consensus 189 ~~~~l~~ 195 (407)
+.|++.+
T Consensus 386 i~g~~l~ 392 (473)
T PRK10429 386 FIGVVLG 392 (473)
T ss_pred HHHHHHH
Confidence 9999887
No 213
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.95 E-value=9.7e-07 Score=81.95 Aligned_cols=297 Identities=12% Similarity=0.123 Sum_probs=168.5
Q ss_pred HHHHHHHHHHHhhhhhhchhhhHHHHHHhhccc-ccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHH
Q 015396 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIA-KREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (407)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (407)
....++...++...+.-+.-...+.+..+...+ --- .+...-.-.+..++.++..|.+.||..|.+++..+.+
T Consensus 3 ~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~------~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~ 76 (432)
T PF06963_consen 3 ALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLP------VSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLV 76 (432)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHH------HHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHH
Confidence 445677788888888888888888777666332 211 3444444556678889999999999999998766654
Q ss_pred HHHHH----HHHhh--c--cc----hHHH---HHHHHHHHhhhccchhHH--HHHHhhhc------cccchhhhhHHHHH
Q 015396 121 SVVIF----NTLFG--L--SV----NFWM---AVLTRFLLGSLNGLLGPI--KAYACEIF------REEHQALGLSTVST 177 (407)
Q Consensus 121 ~~~~~----~~~~~--~--~~----~~~~---l~~~r~l~G~~~g~~~~~--~~~~~~~~------~~~~r~~~~~~~~~ 177 (407)
.--++ +.+.. + .. +.+. +++.-.+.|.-.-....+ .++=.||. +++.+.+.++...-
T Consensus 77 ~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRR 156 (432)
T PF06963_consen 77 VQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRR 156 (432)
T ss_pred HHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHH
Confidence 43322 22111 1 11 1122 222222223222222222 22233443 34455666666666
Q ss_pred HHHHHHHHHHHhhhhhcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHH-Hhcc-------ccCCCCCCCCcch
Q 015396 178 AWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWL-------PETLHRHNDDDDS 249 (407)
Q Consensus 178 ~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------~e~~~~~~~~~~~ 249 (407)
.--+..+++|++.|.+.+ ..+......+.++..++.+.. .+++ |+-..+.+.++++
T Consensus 157 IDL~ckllaPl~vG~l~t----------------~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~ 220 (432)
T PF06963_consen 157 IDLFCKLLAPLFVGLLMT----------------FASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESE 220 (432)
T ss_pred HHHHHHHHHHHHHHHHhh----------------ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCcccc
Confidence 777889999999999987 344455445555555544433 2222 2211111111111
Q ss_pred hhhhhhhhhhc------hhhhhhhhcccccccccccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchh
Q 015396 250 CDVSYDALESA------SAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQ 323 (407)
Q Consensus 250 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~ 323 (407)
.+...++..+. .+...+.-.+....|+.-++++.+.. .+...+.++...++...+..|+.. .|+++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vfla-s~alalLY~TVLsf~~lmt~yl~~------~G~s~~ 293 (432)
T PF06963_consen 221 SSSDEESSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVFLA-SFALALLYFTVLSFGGLMTAYLKS------QGYSPS 293 (432)
T ss_pred ccccccccccccchhhHHHHHHHHHHHHhccHHHHHhCHHHHH-HHHHHHHHHHHhcCcHHHHHHHHH------CCCCHH
Confidence 00000000000 00001111112345555666665444 444445555566777777778877 699999
Q ss_pred hHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHHHHH
Q 015396 324 MVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLL 368 (407)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 368 (407)
..|.+-....+.++.+.. +.+++.+|+|..+.-..+.......+
T Consensus 294 ~igi~R~~gav~Gl~gT~-~~p~l~~riGlvr~G~~~l~~q~~~L 337 (432)
T PF06963_consen 294 VIGIFRGLGAVFGLLGTW-VYPWLMKRIGLVRAGLWSLWWQWVCL 337 (432)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHhcchhhHHHHHHHHHHHH
Confidence 999999999999999985 99999999998888777766544333
No 214
>PRK09669 putative symporter YagG; Provisional
Probab=98.94 E-value=4.3e-09 Score=100.13 Aligned_cols=112 Identities=20% Similarity=0.280 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHH-hhc-cchHHHHHHHHHHHhhhccchhHH-HHHHh
Q 015396 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTL-FGL-SVNFWMAVLTRFLLGSLNGLLGPI-KAYAC 160 (407)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~-~~~-~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~ 160 (407)
.+.+.....++..++.+++++++||+|+|+.+..+.++..+..+. ... .++.+.+++..++.|++.+...+. .++++
T Consensus 266 ~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~a 345 (444)
T PRK09669 266 ATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFS 345 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455566667788889999999999999999998887766644332 222 457777888888999998887776 89999
Q ss_pred hhccc-------cchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 161 EIFRE-------EHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 161 ~~~~~-------~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
|..|. +..|...+.......+|..+|+.++|.+.+
T Consensus 346 d~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~ 387 (444)
T PRK09669 346 DVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILA 387 (444)
T ss_pred hhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98862 234566788888999999999999999987
No 215
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.87 E-value=1.1e-07 Score=85.25 Aligned_cols=142 Identities=30% Similarity=0.488 Sum_probs=116.5
Q ss_pred HHHHHhhhhhhchhhhHHHHHHhhcccc--cccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHH
Q 015396 48 IIVLCTALPISSLFPFLYFMIKDFQIAK--REEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIF 125 (407)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~ 125 (407)
...+..........+..+.+..+++.+. .. .++..+.+.++..++.++.|.++||+|||+.+..+.....++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~ 82 (338)
T COG0477 9 LAALLLGLDLGLLSPALPLLLSTLSLSSGRLL------YGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLG 82 (338)
T ss_pred HHHHHHHHhcchHHHHHHHHHHHcCCCchhHH------HHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHH
Confidence 3344444666777778888888877766 35 899999999999999999999999999998888887765666
Q ss_pred HHHhhccch--HHHHHHHHHHHhhhccchhHH-HHHHhhhccc-cchhhhhHHHHH-HHHHHHHHHHHhhhhhcC
Q 015396 126 NTLFGLSVN--FWMAVLTRFLLGSLNGLLGPI-KAYACEIFRE-EHQALGLSTVST-AWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 126 ~~~~~~~~~--~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~-~~r~~~~~~~~~-~~~~g~~~~~~~~~~l~~ 195 (407)
.+...+..+ .+.+++.|+..|++.+...+. .+++.|+.|+ ++|+...+.... ...+|..++|.+++.+..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (338)
T COG0477 83 TLLLALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLG 157 (338)
T ss_pred HHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666655 899999999999998887775 9999999998 688999998877 688899999988888876
No 216
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.84 E-value=1.8e-08 Score=96.22 Aligned_cols=122 Identities=7% Similarity=-0.037 Sum_probs=104.1
Q ss_pred HhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhcc----------chHHHH
Q 015396 69 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS----------VNFWMA 138 (407)
Q Consensus 69 ~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~----------~~~~~l 138 (407)
+.+|.++.+ .|.+.....++..++....+++.+|++.|+++.++.++.+++.+..... ++.+.+
T Consensus 281 ~~lG~s~~~------~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~ 354 (468)
T TIGR00788 281 QCLPGGPSF------SGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFV 354 (468)
T ss_pred ccCCCCcch------hhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeee
Confidence 568999999 9999999999999999999999999999999999999999887554321 333445
Q ss_pred HHHHHHHhhhccchhH-HHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCC
Q 015396 139 VLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (407)
Q Consensus 139 ~~~r~l~G~~~g~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 196 (407)
...-++.+++.+.... ...++.+..|++++++..++.....++|..+++.+++.+.+.
T Consensus 355 ~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~ 413 (468)
T TIGR00788 355 LGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMET 413 (468)
T ss_pred eehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5556788887777554 599999999999999999999999999999999999999983
No 217
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.83 E-value=1.7e-06 Score=81.26 Aligned_cols=296 Identities=8% Similarity=0.108 Sum_probs=163.8
Q ss_pred HHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccc-----cccchhhHHHHHHHHHHHHHHHh-hhhhhhcccccCChHH
Q 015396 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAK-----REEDIGSYAGYVGSSFMFGRALT-SVFWGLVADRYGRKPV 114 (407)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-----~~~~~~~~~g~~~~~~~~~~~~~-~~~~G~l~dr~Grr~~ 114 (407)
+.++.+.+..|+..+.++.+ -++.+.+.++. +. ..++-+...+...+. .++.+++++|++|+++
T Consensus 7 ~k~~~~~l~fF~il~~Y~iL----R~lKD~lvv~~~~~gae~------i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~l 76 (472)
T TIGR00769 7 KKFLPLFLMFFCILFNYTIL----RDTKDTLVVTAKGSGAEI------IPFLKTWVVVPMAVIFMLIYTKLSNILSKEAL 76 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHH----HhhhhheeecccCCchhh------HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHh
Confidence 45555666666666665444 45666666632 34 777777776666666 8999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcc-----c--------------------------hHHHHHHHHHHHhhhccchhH-H-HHHHhh
Q 015396 115 IIMGTASVVIFNTLFGLS-----V--------------------------NFWMAVLTRFLLGSLNGLLGP-I-KAYACE 161 (407)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~-----~--------------------------~~~~l~~~r~l~G~~~g~~~~-~-~~~~~~ 161 (407)
+-.....+.....++++. + +.|...+..+...+....... . ..+..|
T Consensus 77 f~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fand 156 (472)
T TIGR00769 77 FYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQ 156 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 887776666665555443 1 123333333444444444333 4 889999
Q ss_pred hccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcccccccccCCCC--h--hHHHHHHHHHHHHHHHHhccc
Q 015396 162 IFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPY--F--LPCLCISLFAFGVTIAAFWLP 237 (407)
Q Consensus 162 ~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~ 237 (407)
.+..++-.|..+++..+.++|..+++.+..++.+.....+.. ...| . ....+.++..++.+.+..++.
T Consensus 157 i~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~i~~~~~~~~~~~~~~l~ 228 (472)
T TIGR00769 157 ITTIDEAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPG--------VDGWHVSLKNLMVIVICSGLAIILLYWWVN 228 (472)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccc--------cChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999988887421111000 1112 1 122333333333334444443
Q ss_pred cCCCCCCCCcchhhhhhhhhhhchhhhhhhhcccccccccccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCc
Q 015396 238 ETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGG 317 (407)
Q Consensus 238 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (407)
+.....+...+.++ .++.++.+.......+.++++|.++...+...++...........-....+.+...
T Consensus 229 ~~~~~~~~~~~~~~---------~~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p~~- 298 (472)
T TIGR00769 229 RNVLTDPRSYNPAL---------KEKKVKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQYPSP- 298 (472)
T ss_pred hcccCCccccchhh---------ccccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH-
Confidence 22211110000000 00000011112345567889998888776666655443333322222221110000
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHHH
Q 015396 318 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIP 366 (407)
Q Consensus 318 ~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 366 (407)
... .+-.|.+....++..++.+. +.+++.+|+|-+....+.-++..+
T Consensus 299 ~~~-~~f~g~~~~~~gi~tl~~~l-~~~~l~~~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 299 NEY-SAFMGDFSTWTGVVSVTMML-LSGNVIRKYGWLTAALITPLVMLL 345 (472)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHH
Confidence 011 22244556666777767665 448999999977666655444433
No 218
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.79 E-value=9.3e-08 Score=90.16 Aligned_cols=180 Identities=14% Similarity=0.221 Sum_probs=120.4
Q ss_pred CCCchHHHH------HHHHHHHHhhhhhhchhhhHHHH-HHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccc
Q 015396 36 SGLPITELF------SIWIIVLCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR 108 (407)
Q Consensus 36 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr 108 (407)
.+.||+.++ .+++..+........+....|.+ .+.+|.+..+ .|++.++..+...+..+++|.++||
T Consensus 247 ~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~------~G~~salP~l~~~~~k~~~g~lsD~ 320 (466)
T KOG2532|consen 247 PPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRE------TGFLSALPFLAMAIVKFVAGQLSDR 320 (466)
T ss_pred CCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhh------hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456666654 57778888888888889999955 5568999999 9999999999999999999999998
Q ss_pred cCCh--------HH-HHHHHHHHHHHHHHhhccch--H-HHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHH
Q 015396 109 YGRK--------PV-IIMGTASVVIFNTLFGLSVN--F-WMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTV 175 (407)
Q Consensus 109 ~Grr--------~~-~~~~~~~~~~~~~~~~~~~~--~-~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~ 175 (407)
.-+| |. =.++....+++.+..++.++ . ..++..-+..++. |..... +.-..|. -+++-+..+|+.
T Consensus 321 l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~-g~~~~Gf~~~~~~~-apq~a~~l~g~~ 398 (466)
T KOG2532|consen 321 LTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLS-GFNISGFYKNHQDI-APQHAGFVMGII 398 (466)
T ss_pred HhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHc-ccchhhhHhhhhhc-cchHHHHHHHHH
Confidence 8552 22 23344555555555555542 2 1222221222222 222222 3333333 457889999999
Q ss_pred HHHHHHHHHHHHHhhhhhcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhcc
Q 015396 176 STAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWL 236 (407)
Q Consensus 176 ~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (407)
+....+...++|.+.+.+... + . +..|+..|++.++..++.-+...+.
T Consensus 399 ~~~~~~~~~~~P~~vg~~~~~-~---t---------~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 399 NFVGALAGFIAPLLVGIIVTD-N---T---------REEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred HHHHHHHHHHHHHheeeEeCC-C---C---------HHHHHHHHHHHHHHHHHhchheeEe
Confidence 999999999999999999951 1 1 3345666688777766655444333
No 219
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.76 E-value=2.3e-08 Score=92.15 Aligned_cols=142 Identities=21% Similarity=0.322 Sum_probs=120.3
Q ss_pred HHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHH
Q 015396 48 IIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNT 127 (407)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~ 127 (407)
+...+.+.+...+...+--..++.+..+.- .|........+-++.-++.+++.+|+|+-+++..++.+..+=.+
T Consensus 378 ~~av~mG~g~~lv~tFLfWHled~~~~~~L------fGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~ 451 (618)
T KOG3762|consen 378 FVAVVMGAGVGLVFTFLFWHLEDLGGIKTL------FGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFL 451 (618)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCccee------eeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHH
Confidence 334444455555555555556788766666 77777777777788888999999999999999999999999999
Q ss_pred HhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHH-HHHHHHHHHHHHHhhhhhcC
Q 015396 128 LFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTV-STAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 128 ~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~-~~~~~~g~~~~~~~~~~l~~ 195 (407)
..+..+|+|..+-..+++|+..+....+ .+|+++..||+-|..+.++. ....++|-.+|.++||.+.+
T Consensus 452 ~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~ 521 (618)
T KOG3762|consen 452 YYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVE 521 (618)
T ss_pred HHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhhe
Confidence 9999999999999999999998887775 99999999999999999998 66788999999999999998
No 220
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.74 E-value=5.7e-07 Score=79.39 Aligned_cols=148 Identities=17% Similarity=0.128 Sum_probs=114.3
Q ss_pred HHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhccccc-CChHHHHHHHHH
Q 015396 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-GRKPVIIMGTAS 121 (407)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-Grr~~~~~~~~~ 121 (407)
.+.+.+..-+..+..+....++|.+..|-|+|..+ .|++.+...+.....++....+.+|. ++|+.......+
T Consensus 210 aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~------aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~ 283 (395)
T COG2807 210 AWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAE------AGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLL 283 (395)
T ss_pred hHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHH------hhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Confidence 44556666677788888899999999999999999 99999999999999999999999965 466677777777
Q ss_pred HHHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhcc-ccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCC
Q 015396 122 VVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR-EEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (407)
Q Consensus 122 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 197 (407)
..++...+.+.+.-..+.- -++.|++.|...+. ..++.+..+ +++-++..++.+....+=...||.+.|++.|..
T Consensus 284 ~l~G~~G~~~~P~~~~~lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~ 360 (395)
T COG2807 284 MLVGLVGLLLAPGQLPILW-ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDAT 360 (395)
T ss_pred HHHHHHHHHHhhhhHHHHH-HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhc
Confidence 7777766666543322222 38999998887775 888888776 445556666667776777778999999999853
No 221
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.74 E-value=5.1e-07 Score=84.56 Aligned_cols=127 Identities=14% Similarity=0.070 Sum_probs=92.3
Q ss_pred hhHHHHH-HhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHH-HHHHHHHHHhhc--cchHHH
Q 015396 62 PFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT-ASVVIFNTLFGL--SVNFWM 137 (407)
Q Consensus 62 ~~~~~~~-~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~-~~~~~~~~~~~~--~~~~~~ 137 (407)
...+.+. +.+|.++.+ .+++.....++..+++++.+++.||++++....... +...+....... ..+.+.
T Consensus 228 ~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (394)
T PRK11652 228 ACSGVLMGAVLGLSSMT------VSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWT 301 (394)
T ss_pred HhChHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHH
Confidence 3344444 448888887 899888888999999999999999998433332222 222222222221 345677
Q ss_pred HHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 138 AVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 138 l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
+.+..++.|++.+...+. .++..|.+| ++++...++.+....+|..+++.+++.+.+
T Consensus 302 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~ 359 (394)
T PRK11652 302 LLVPAALFFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQ 359 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 777888899988887775 888888887 578999999999999999999999998875
No 222
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.74 E-value=2.9e-08 Score=91.95 Aligned_cols=120 Identities=18% Similarity=0.148 Sum_probs=85.1
Q ss_pred hhhchhhhHHHHH-HhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhc--c
Q 015396 56 PISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL--S 132 (407)
Q Consensus 56 ~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~--~ 132 (407)
.........|.+. +.+|.++.+ .++..+...++..++.++.|+++||+|||+.+..+......+..+..+ .
T Consensus 240 ~~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~ 313 (366)
T TIGR00886 240 SFLGVSSIFAMFFKDQFGLSKVT------AGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLV 313 (366)
T ss_pred HHHHHHHHHHHHHHHHcCCcHHH------HHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCC
Confidence 3344455566554 567988888 898899999999999999999999999998887776666555544433 2
Q ss_pred c--hHHHHHHHHHHHhhhccchhH-HHHHHhhhccccchhhhhHHHHHHHHHH
Q 015396 133 V--NFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIG 182 (407)
Q Consensus 133 ~--~~~~l~~~r~l~G~~~g~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g 182 (407)
. +.+.+.+...+.++..|.... ..+++.|..| +++|.++|+.+...++|
T Consensus 314 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 314 SPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred CcchHHHHHHHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 2 555555555555555555444 3677778776 69999999987776654
No 223
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.72 E-value=2.5e-07 Score=86.91 Aligned_cols=142 Identities=12% Similarity=-0.039 Sum_probs=97.5
Q ss_pred HHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHH
Q 015396 47 WIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFN 126 (407)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~ 126 (407)
.+..++...........++.+.++.+...++.. .+...+.+..+..++.++.|++.||+++|+++.++.++..+.+
T Consensus 238 ~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~----a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ 313 (410)
T TIGR00885 238 VIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGF----AANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALC 313 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHH----HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 333444333333445666666665433322211 4445666667778999999999999999999999998888888
Q ss_pred HHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 127 TLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 127 ~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
++....++... ...-++.|++.+...|. .+...+..+++.+....++.. ..+|+++.|++.|++.|
T Consensus 314 ll~~~~~~~~~-~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~--~~~Gga~~p~l~G~~~d 380 (410)
T TIGR00885 314 LGSIFAGGHVG-LYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVM--AIIGGGIVPPLQGFIID 380 (410)
T ss_pred HHHHHcCChHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHH--HHhccchHHHHHHHHHH
Confidence 88887776544 45556777776665575 899999888665433333333 33999999999999998
No 224
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.71 E-value=2.8e-08 Score=89.91 Aligned_cols=192 Identities=14% Similarity=0.034 Sum_probs=134.3
Q ss_pred HHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchh--hHHHHHHHHH-HHHHHHhhhhhhhcccccCChHHHHHH
Q 015396 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIG--SYAGYVGSSF-MFGRALTSVFWGLVADRYGRKPVIIMG 118 (407)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~--~~~g~~~~~~-~~~~~~~~~~~G~l~dr~Grr~~~~~~ 118 (407)
.++..+...|+.-...+........+.+..|..+.+.+.. ........+. ..+++.+-.+...+.|++|||+..+.+
T Consensus 305 ~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~G 384 (538)
T KOG0252|consen 305 HLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMG 384 (538)
T ss_pred HHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhh
Confidence 3444556666666677777778888888888877663321 1122222222 233444777889999999999999999
Q ss_pred HHHHHHHHHHhhccch----HHHHHHHHHHHhhh--ccchhHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhh
Q 015396 119 TASVVIFNTLFGLSVN----FWMAVLTRFLLGSL--NGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGF 192 (407)
Q Consensus 119 ~~~~~~~~~~~~~~~~----~~~l~~~r~l~G~~--~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 192 (407)
.++..+..+..+...| -..+++...+..+. .|.......+-+|.+|.+.|+...|+.....-.|.++|...-.+
T Consensus 385 F~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~ 464 (538)
T KOG0252|consen 385 FFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLY 464 (538)
T ss_pred HHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhH
Confidence 9999999998888766 12233333333332 23334446678999999999999999999999999999988888
Q ss_pred hcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhccccCCCCCC
Q 015396 193 LAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHN 244 (407)
Q Consensus 193 l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 244 (407)
+.++. ++. ..+.+..+++.+...++..+..+++||+..+..
T Consensus 465 ~t~~~--yp~---------~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~~~l 505 (538)
T KOG0252|consen 465 LTDHN--YPP---------NIGVRNVFIILAGCMLLGILFTLLIPETKGKSL 505 (538)
T ss_pred hhhcc--CCc---------cccchHHHHHHHHHHHHhHheeEEeecccccCH
Confidence 87632 222 334555558888888888888888998876543
No 225
>PRK11462 putative transporter; Provisional
Probab=98.69 E-value=6.6e-07 Score=85.40 Aligned_cols=112 Identities=14% Similarity=0.186 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhcc--chHHHHHHHHHHHhhhccchhHH-HHHHh
Q 015396 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS--VNFWMAVLTRFLLGSLNGLLGPI-KAYAC 160 (407)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~g~~~~~-~~~~~ 160 (407)
.+.+.+.+.++.+++.+++++++||+|+|+++..+..+..+..++..+. .+.+.+++.-++.|++.+...+. .++++
T Consensus 265 ~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~a 344 (460)
T PRK11462 265 FVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMS 344 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5667778888889999999999999999998776555444433333222 22334445556677776665554 77777
Q ss_pred hhcc-------ccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 161 EIFR-------EEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 161 ~~~~-------~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
|..+ +++.|..++......-+|..+++.++|.+.+
T Consensus 345 d~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~ 386 (460)
T PRK11462 345 DTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLA 386 (460)
T ss_pred HhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7766 3333555677778899999999999999886
No 226
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.69 E-value=7.4e-07 Score=85.37 Aligned_cols=150 Identities=13% Similarity=0.092 Sum_probs=107.7
Q ss_pred HHHHHHHHHhhhhhhchhhhHHHHHHh-hcccccccchhhHHHHHHHHHHHHHHHhhhhhh----hcccc-cCChHHH--
Q 015396 44 FSIWIIVLCTALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWG----LVADR-YGRKPVI-- 115 (407)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G----~l~dr-~Grr~~~-- 115 (407)
..+++..++....+.-....++.+.++ .+.+.. ......+++.+...+.-.+.+++.. ++.|| .+.+...
T Consensus 275 l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~--~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~ 352 (475)
T TIGR00924 275 IVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEML--GMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKF 352 (475)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHhcccccc--ceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHH
Confidence 334444445455555555556655443 333211 1112267888888888888888755 44554 3334433
Q ss_pred HHHHHHHHHHHHHhhc---------cchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHH
Q 015396 116 IMGTASVVIFNTLFGL---------SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLII 185 (407)
Q Consensus 116 ~~~~~~~~~~~~~~~~---------~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 185 (407)
.++.++.+++....++ ..|+|+++...++.|+|.....|. .+++.+..|++.||+.+|++.....+|..+
T Consensus 353 ~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l 432 (475)
T TIGR00924 353 TLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLL 432 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 6778888777766653 468999999999999999998886 999999999999999999999999999999
Q ss_pred HHHhhhhhcC
Q 015396 186 GPALGGFLAQ 195 (407)
Q Consensus 186 ~~~~~~~l~~ 195 (407)
++.+.....+
T Consensus 433 ~~~~~~~~~~ 442 (475)
T TIGR00924 433 GGYLATFGAV 442 (475)
T ss_pred HHHHHHHHhc
Confidence 9999887765
No 227
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.69 E-value=8.1e-08 Score=85.47 Aligned_cols=160 Identities=18% Similarity=0.192 Sum_probs=118.4
Q ss_pred HHHHhhhhhhchhhhHHH-HHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccC--ChHHHHHHHHHHHHH
Q 015396 49 IVLCTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG--RKPVIIMGTASVVIF 125 (407)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G--rr~~~~~~~~~~~~~ 125 (407)
.....+....+.-|.++. +.|.+..+.-+ .|+..--..+.+.++..+.|.++||++ |-.....+++..++.
T Consensus 278 ai~~~n~~lafLePtlslwm~e~m~~p~w~------~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~ 351 (464)
T KOG3764|consen 278 AITFSNSSLAFLEPTLSLWMLETMFTPGWE------VGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVS 351 (464)
T ss_pred chhhccchHHHhCcccHHHHHHhccCCCcc------eeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHH
Confidence 333445566677788885 55666744446 788777788899999999999999999 544455567777777
Q ss_pred HHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhcc---cc---chhhhhHHHHHHHHHHHHHHHHhhhhhcCCCC
Q 015396 126 NTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR---EE---HQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (407)
Q Consensus 126 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~---~~---~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 198 (407)
+....+++++.++++-++..|++.+..... ...+.+..+ .+ .-|...++...++++|.++||.++|.+.+
T Consensus 352 ~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~--- 428 (464)
T KOG3764|consen 352 SGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVE--- 428 (464)
T ss_pred hchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchhee---
Confidence 778888999999999998888876664443 333444433 33 45788899999999999999999999998
Q ss_pred CCCCcccccccccCCCChhHHHHHHHHHHHHH
Q 015396 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVT 230 (407)
Q Consensus 199 ~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~ 230 (407)
++++.+...+.++..++-.
T Consensus 429 -------------~iGF~wl~~iig~~n~iya 447 (464)
T KOG3764|consen 429 -------------AIGFEWLMTIIGILNLIYA 447 (464)
T ss_pred -------------ehhHHHHHHHHHHHHHHHH
Confidence 6667766666666665533
No 228
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.65 E-value=7.2e-07 Score=82.76 Aligned_cols=147 Identities=12% Similarity=0.212 Sum_probs=111.6
Q ss_pred HHHHHHHHHHhhhhhhchhhhHHHHHHh-hcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHH
Q 015396 43 LFSIWIIVLCTALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (407)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~ 121 (407)
+..+++..++.....+.......++.+. +|.++.. ..+.......+.+++.+++.++++|+|+|+++.++.++
T Consensus 238 ~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~------~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~ 311 (467)
T COG2211 238 LLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELF------AYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLL 311 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHH------HHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHH
Confidence 3344445666666666666666655432 3444444 66777777777778899999999999999999999999
Q ss_pred HHHHHHHhhccc--hHHHHHHHHHHHhhhccchhHH-HHHHhhhcc-------ccchhhhhHHHHHHHHHHHHHHHHhhh
Q 015396 122 VVIFNTLFGLSV--NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR-------EEHQALGLSTVSTAWGIGLIIGPALGG 191 (407)
Q Consensus 122 ~~~~~~~~~~~~--~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~-------~~~r~~~~~~~~~~~~~g~~~~~~~~~ 191 (407)
..++.++.-+.+ +.+.+++..++.+++.+...+. .++++|..+ .+.-|...+......=+|.+++..+.|
T Consensus 312 ~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g 391 (467)
T COG2211 312 LAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPG 391 (467)
T ss_pred HHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 999988877754 7888888889999998887775 888888765 233466677778888889999998888
Q ss_pred hhcC
Q 015396 192 FLAQ 195 (407)
Q Consensus 192 ~l~~ 195 (407)
+..+
T Consensus 392 ~~L~ 395 (467)
T COG2211 392 WILG 395 (467)
T ss_pred HHHH
Confidence 8886
No 229
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.63 E-value=1.1e-07 Score=65.87 Aligned_cols=80 Identities=16% Similarity=0.278 Sum_probs=74.3
Q ss_pred hhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhcc
Q 015396 53 TALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS 132 (407)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~ 132 (407)
.++++..+.|.+|.+.+|.++|.++ .|++.+...+|+.+|.+...++.++..+++.+..+.+...+..+.+++.
T Consensus 4 mGigRFayTplLP~M~~~~~ls~~~------ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLSLSQ------AGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567888999999999999999999 9999999999999999999999999888999999999999999999999
Q ss_pred chHHHH
Q 015396 133 VNFWMA 138 (407)
Q Consensus 133 ~~~~~l 138 (407)
++++.+
T Consensus 78 ~~~~~w 83 (85)
T PF06779_consen 78 HSFWLW 83 (85)
T ss_pred hchHHH
Confidence 887765
No 230
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.59 E-value=3.4e-10 Score=108.04 Aligned_cols=165 Identities=18% Similarity=0.234 Sum_probs=102.5
Q ss_pred hhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhh--c--
Q 015396 56 PISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG--L-- 131 (407)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~--~-- 131 (407)
+........+.+.+..+.++.. . ...+ ..+...++.+....+.||+|||+.++.+.++.+++.+..+ .
T Consensus 268 g~~~~~~~~~~i~~~~~~~~~~-~----~~~~---~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~ 339 (451)
T PF00083_consen 268 GINFIFYYSPSIFENAGISNSF-L----ATLI---LGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFL 339 (451)
T ss_pred cccccccccccccccccccccc-c----cccc---ccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3344445556777777776652 0 2222 2234456677777999999999999999888888777664 1
Q ss_pred -cch-----HHHHHHHHHH-HhhhccchhHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcc
Q 015396 132 -SVN-----FWMAVLTRFL-LGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLF 204 (407)
Q Consensus 132 -~~~-----~~~l~~~r~l-~G~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~ 204 (407)
.++ ...+...... .+.+.+.......+..|.+|.+.|+++.++......++..++|.+...+.+. .
T Consensus 340 ~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~-------~ 412 (451)
T PF00083_consen 340 GVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNN-------L 412 (451)
T ss_pred ccccccccccccceeeeecccccccccccccccccccccccccccccccccccccccccccccccccccccc-------c
Confidence 121 1122211111 1222233323378889999999999999999888888988888887777762 1
Q ss_pred cccccccCCCChhHHHHHHHHHHHHHHHHhccccCCCCC
Q 015396 205 SSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRH 243 (407)
Q Consensus 205 gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 243 (407)
+ .+.......++..+..++..+++||++.+.
T Consensus 413 ~--------~~~~~~i~~~~~~i~~i~~~~~lpET~g~~ 443 (451)
T PF00083_consen 413 G--------GWGVFLIFAGVCLIAIIFVYFFLPETKGKT 443 (451)
T ss_pred c--------ccccchhhHHHHHHHHhheeEEEeeCCCCC
Confidence 1 011112333334444556678899987654
No 231
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.59 E-value=1.9e-06 Score=77.82 Aligned_cols=143 Identities=20% Similarity=0.191 Sum_probs=117.9
Q ss_pred HHHHHhhhhhhchhhhHHHH-HHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhccc-ccCChHHHHHHHHHHHHH
Q 015396 48 IIVLCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD-RYGRKPVIIMGTASVVIF 125 (407)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~d-r~Grr~~~~~~~~~~~~~ 125 (407)
...++..+..++.-+++.+| .+-||.+..+ ...++.....|..++....|++.. |.++|+.-.+++....++
T Consensus 215 ~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~e------TT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~ 288 (403)
T PF03209_consen 215 VFLFLGTLAFFMQDVILEPYGGEVFGMSVGE------TTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALA 288 (403)
T ss_pred HHHHHHHHHHHhhHHHcCCchhHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHH
Confidence 34444455555666677444 5779999999 889999999999999999998877 778888887888777776
Q ss_pred HHHh---hccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCC
Q 015396 126 NTLF---GLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (407)
Q Consensus 126 ~~~~---~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 196 (407)
..+. +...+.+.+...-++.|++.|.+.+. .+...|..++++.|..+|.+.....++..++..++|.+.|.
T Consensus 289 f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~ 363 (403)
T PF03209_consen 289 FALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDL 363 (403)
T ss_pred HHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6554 34567899999999999999999886 89999999999999999999999999999999999998873
No 232
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.57 E-value=5.5e-06 Score=76.98 Aligned_cols=261 Identities=14% Similarity=0.081 Sum_probs=152.1
Q ss_pred HHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhcccc
Q 015396 88 GSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE 166 (407)
Q Consensus 88 ~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~ 166 (407)
+++......+++++.+.+.|+.|.|..+.++..+.....+.+.+ .|-+.++++-.+.|+|.+..... -.+++|..+++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 66777778899999999999999999999999999887776654 55677888899999999998886 88999999999
Q ss_pred chhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCC-CCcccc-cccccCCCChhHH---HHHHHH---HHHHHHHHhcccc
Q 015396 167 HQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY-PNLFSS-ESLFGKFPYFLPC---LCISLF---AFGVTIAAFWLPE 238 (407)
Q Consensus 167 ~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~-~~~~gw-~~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~e 238 (407)
.+.+..++.......+.++|..+...+....... ....+- +..+ ... ...+ .+.+++ ..+..+...++|.
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~i~~~~~v~~~~~~l~~i~~~~~p~ 212 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVF-EVL-FIDFEIKVLFGVLLAISVLSIINFDFLPS 212 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhc-chh-hhhHHHHHHHHHHHHHHHHHhhheeecCc
Confidence 9999999988888888888866655554322111 001111 1111 000 0001 111111 1111111222332
Q ss_pred CCCCCCCCcchhhhhhhhhhhchhhhhhhhcccccccccccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCcc
Q 015396 239 TLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGL 318 (407)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (407)
.......+..+ +...+..+...++++++++..+...++...+...-+...+|..+.... ..
T Consensus 213 ~~~~~~~~~~~----------------~~~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~---~~ 273 (461)
T KOG3098|consen 213 KDVVNCKSSSE----------------TSFSELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTR---KL 273 (461)
T ss_pred cchhhhhhhcc----------------ccHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhh---hc
Confidence 11111000000 000111224456677888877777666665555555555554443321 12
Q ss_pred cc-chhhHHHHHHHHHHHHHHHHHhHHHHHHHH---hchhHHHHHHHHHHHHHHhhh
Q 015396 319 NY-STQMVGEVLAITGFSLLVFQLSLYPFLERI---LGPIMVARIAGVLTIPLLTSY 371 (407)
Q Consensus 319 g~-s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~ 371 (407)
+. +....+......+++.++++. ..+.+.|| +|+++.+.++..+..+.+++.
T Consensus 274 ~~n~~~~~ai~~~~~g~g~v~~g~-~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li 329 (461)
T KOG3098|consen 274 GSNTTYLIAIYSIGIGLGEVIGGL-DFSILSKRIRGFGRKPTVLIGIIIHLIGFLLI 329 (461)
T ss_pred cCcchhHHHHHHHHHhHHHHHHHH-HHHHHhhhhhhcccCcchhHHHHHHHHHHHHH
Confidence 22 222344455556666666654 44555544 677777777776665555543
No 233
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.55 E-value=8.9e-07 Score=79.35 Aligned_cols=146 Identities=17% Similarity=0.145 Sum_probs=115.8
Q ss_pred HHHHHHHHHHHHhhhhhhchhhhHHHHHHh-hcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHH
Q 015396 41 TELFSIWIIVLCTALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (407)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~ 119 (407)
+++..-.++.|+..........+++.+.++ .|.++.+ .....+.+..+..+|.+..-++..|+...|.+.+..
T Consensus 236 ~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~------aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a 309 (422)
T COG0738 236 KHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQ------AAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYA 309 (422)
T ss_pred hHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 344445555666555666777788877776 7888888 889999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
++..+.++..+++++.+.+.. -++.|+..+...|. .+...+..| ++ ....+..-.+..+|+++-|.+.|++.|
T Consensus 310 ~~~ill~~~~~l~~g~v~~~~-l~~ig~F~simfPTIfslal~~l~-~~-ts~~s~~l~maivGGAiiP~l~G~i~d 383 (422)
T COG0738 310 LIAILLLLAVALIGGVVALYA-LFLIGLFNSIMFPTIFSLALKNLG-EH-TSVGSGLLVMAIVGGAIIPPLQGVIAD 383 (422)
T ss_pred HHHHHHHHHHHHhcChHHHHH-HHHHHHHhHHHHHHHHHHHHhccC-cc-ccccceeeeeheecchHHHHHHHHHHH
Confidence 999988888889888666544 46778888887775 999999998 33 334455555677899999999999999
No 234
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.54 E-value=1.9e-06 Score=81.12 Aligned_cols=146 Identities=8% Similarity=-0.004 Sum_probs=90.5
Q ss_pred HHHHHHHHHHhhhhhhchhhhHHHHH-HhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHH
Q 015396 43 LFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (407)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~ 121 (407)
++...+..++............|.+. +.+|.+..+ .++.......+..+++.+.+.+.+|.++++.+.....+
T Consensus 220 ~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~------~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~ 293 (413)
T PRK15403 220 FLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQ------FAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPI 293 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHH
Confidence 33333333444444444555567555 456899888 89988878888888888888876554444443222222
Q ss_pred HHHHHHHhh-----ccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 122 VVIFNTLFG-----LSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 122 ~~~~~~~~~-----~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
..++..+.. ..++++..++..++.+++.+...+. .. .+..-.+..+|++.++.+.....+..+++..++++.+
T Consensus 294 ~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~p~~~~-~al~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~ 372 (413)
T PRK15403 294 QLVGLALLIVGNLLWPHVWLWSVLGTSLYAFGIGLIFPTLFR-FTLFSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWF 372 (413)
T ss_pred HHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHhHHHHH-HHhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222221 2334444567778888887776664 43 2222223357999999998888889999999998875
No 235
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.51 E-value=8.1e-06 Score=77.25 Aligned_cols=186 Identities=16% Similarity=0.040 Sum_probs=125.2
Q ss_pred HHHHHHHHHHHhhhhhhchhhhHHHHHH--hhcccccccch---h-hHHHHHHHHHHHHHHHhhhhhhhcccccCC-hHH
Q 015396 42 ELFSIWIIVLCTALPISSLFPFLYFMIK--DFQIAKREEDI---G-SYAGYVGSSFMFGRALTSVFWGLVADRYGR-KPV 114 (407)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~s~~~~~~---~-~~~g~~~~~~~~~~~~~~~~~G~l~dr~Gr-r~~ 114 (407)
.+..+++..++..++...+..+.+++.. -|+-++.+.+. + ..-.+....+.+...+.+++.-++.+|+|+ |++
T Consensus 259 ~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~ 338 (477)
T TIGR01301 259 PVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRL 338 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhH
Confidence 3456778888888877777666665543 34443322110 0 112344445555556777888889999995 777
Q ss_pred HHHHHHHHHHHHHHhhccch---------------------HHHHHHHHHHHhhhccchhHH-HHHHhhhcccc--chhh
Q 015396 115 IIMGTASVVIFNTLFGLSVN---------------------FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE--HQAL 170 (407)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~---------------------~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~--~r~~ 170 (407)
..++.++.+++.+...+.++ .+..++...+.|+..+..... ++++++..+++ +.|.
T Consensus 339 ~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~ 418 (477)
T TIGR01301 339 WGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGL 418 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcc
Confidence 78998888888777765432 367777888999987776665 99999999954 5599
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHH-HHHhccccCCC
Q 015396 171 GLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLH 241 (407)
Q Consensus 171 ~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~ 241 (407)
.+|+.+.+..+.+.+..+..|.+.+ .+|-+ -...+.+.++..++.. ...+.+|+.++
T Consensus 419 ~mgilN~~I~lpQii~sl~~g~~~~-------~~g~~-------~~~~~~~~gv~~~~aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 419 SMGVLNLAIVIPQIIVSLGSGPWDQ-------LFGGG-------NLPAFVVGAVAAFVSGLLALILLPRPRV 476 (477)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHH-------HcCCC-------CeeHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999999988888655 33222 1223456666665544 44566776543
No 236
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.49 E-value=2.9e-06 Score=81.85 Aligned_cols=109 Identities=8% Similarity=-0.035 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHHHhhhhh----hhcccccCChHHHHHHHHHHHHHHHHhhccch---------HHHHHHHHHHHhhhcc
Q 015396 84 AGYVGSSFMFGRALTSVFW----GLVADRYGRKPVIIMGTASVVIFNTLFGLSVN---------FWMAVLTRFLLGSLNG 150 (407)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~----G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~---------~~~l~~~r~l~G~~~g 150 (407)
.+++.++..+...+..++. +++.||++.++.+.++.++.+++.+..+.+.+ .++++..+++.|++++
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~ 397 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGEL 397 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHH
Confidence 5677777776666666655 77777777778889999999999888766544 5688899999999999
Q ss_pred chhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhh
Q 015396 151 LLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGF 192 (407)
Q Consensus 151 ~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 192 (407)
...|. .+++.+..|++.||+.+|.+.....+|..++..+.+.
T Consensus 398 ~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~ 440 (500)
T PRK09584 398 MISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANL 440 (500)
T ss_pred HHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99886 9999999999999999999888877777777666653
No 237
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.47 E-value=5e-07 Score=62.25 Aligned_cols=70 Identities=23% Similarity=0.529 Sum_probs=61.5
Q ss_pred HHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHH
Q 015396 46 IWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (407)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~ 121 (407)
+-...++.+...+.+.|.+|.+.++.|.++.+ +|.+.++..+...++.+++|.++||+++++.++....+
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~------iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLKQLGLSPSQ------IGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 44556777778888999999999999999999 99999999999999999999999999998887765544
No 238
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.43 E-value=7.2e-06 Score=64.93 Aligned_cols=106 Identities=20% Similarity=0.184 Sum_probs=88.9
Q ss_pred HHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhcccc
Q 015396 88 GSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE 166 (407)
Q Consensus 88 ~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~ 166 (407)
.++......+.+++.+.+.+++|.|+.++++.++..+-.... +-++.+.++.+-.+.|++.+...+. ..++.+..+++
T Consensus 43 lai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~ 121 (156)
T PF05978_consen 43 LAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEE 121 (156)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHH
Confidence 444555567888889999999999999999999888665554 4567788999999999999998887 88999999999
Q ss_pred chhhhhHHHHHHHHHHHHHHHHhhhhhc
Q 015396 167 HQALGLSTVSTAWGIGLIIGPALGGFLA 194 (407)
Q Consensus 167 ~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 194 (407)
+|++-.++.......+.++|.++.-++.
T Consensus 122 ~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 122 TIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998888888888887766554
No 239
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.42 E-value=5.8e-05 Score=69.12 Aligned_cols=106 Identities=18% Similarity=0.099 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhh
Q 015396 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEI 162 (407)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~ 162 (407)
.+.+.-+-.+...+..+.+.++.+|+..+.=...+.++..++.++.+++++.+.=+++-.+.+++.|..-.. ..+ +..
T Consensus 61 t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~l-t~~ 139 (402)
T PF02487_consen 61 TGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSL-THF 139 (402)
T ss_pred chHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHH-HHh
Confidence 455666666777888888999999998766666777788889999999999998888888888887776665 444 445
Q ss_pred ccccchhhhhHHHHHHHHHHHHHHHHhhhhhc
Q 015396 163 FREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (407)
Q Consensus 163 ~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 194 (407)
+++ ...+-+..+.+.++++|+..-..+.
T Consensus 140 y~~----~~l~~wssGTG~aGl~Ga~~y~~lT 167 (402)
T PF02487_consen 140 YGK----SSLSAWSSGTGGAGLVGALYYLGLT 167 (402)
T ss_pred cCc----cccccccCCcChhhHHHHHHHHHHH
Confidence 554 3567778888888888876655554
No 240
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.41 E-value=6.4e-06 Score=79.94 Aligned_cols=179 Identities=14% Similarity=0.161 Sum_probs=109.3
Q ss_pred HHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHH
Q 015396 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (407)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~ 122 (407)
...+.+..+....+.+....+.+.+.+..|.+... .+...+..+...++..+...+.||+|||+.++.+....
T Consensus 297 ~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-------~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m 369 (513)
T KOG0254|consen 297 IIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-------FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGM 369 (513)
T ss_pred HHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-------HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHH
Confidence 33455566666667788888888888888776542 23333444455666777799999999999999999999
Q ss_pred HHHHHHhhccch-------------HHHHHHHH-HHHhhhccchhHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHH
Q 015396 123 VIFNTLFGLSVN-------------FWMAVLTR-FLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPA 188 (407)
Q Consensus 123 ~~~~~~~~~~~~-------------~~~l~~~r-~l~G~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 188 (407)
.++.++.+.... ...+.... ++..+..+.......+.+|.+|.+.|+++.++......+...+-..
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~ 449 (513)
T KOG0254|consen 370 SICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISF 449 (513)
T ss_pred HHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHH
Confidence 999887765311 11122222 2233333333334778999999999999998876655555544333
Q ss_pred hhhhhcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHH-HHHhccccCCCCC
Q 015396 189 LGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRH 243 (407)
Q Consensus 189 ~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~ 243 (407)
....+.+ ..++...| +.+.++..+... ...+++||++...
T Consensus 450 ~~~~~~~-------~~~~~~~f--------~~f~~~~~~~~~~fv~~~~pETkg~s 490 (513)
T KOG0254|consen 450 FFPFITE-------ALGIGGTF--------GYFGGICLLSLIIFVFFFVPETKGLT 490 (513)
T ss_pred HHHHHHH-------hccccchH--------HHHHHHHHHHHHHHheEEcccCCCCc
Confidence 3333332 11111111 133333333344 4667889987654
No 241
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.37 E-value=5.1e-06 Score=79.80 Aligned_cols=111 Identities=12% Similarity=0.056 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcccccCChHH-------HHHHHHHHHHHHHHh-----hc-----cchHHHHHHHHHHHh
Q 015396 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPV-------IIMGTASVVIFNTLF-----GL-----SVNFWMAVLTRFLLG 146 (407)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~-------~~~~~~~~~~~~~~~-----~~-----~~~~~~l~~~r~l~G 146 (407)
.+++.+...+...+.+++.+++.||+|+|+. +.++.++.+++.+.. .. ..+.|+++...++.|
T Consensus 311 ~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g 390 (489)
T PRK10207 311 PVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQS 390 (489)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHH
Confidence 5677777778888899999999999999873 666766666665322 11 135788888899999
Q ss_pred hhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhc
Q 015396 147 SLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (407)
Q Consensus 147 ~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 194 (407)
+|.+...+. .+++.+..|++.++.+++++.....+|..+|..++....
T Consensus 391 ~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~ 439 (489)
T PRK10207 391 LGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTA 439 (489)
T ss_pred HHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999998886 999999999999999999999999999999998887664
No 242
>PTZ00207 hypothetical protein; Provisional
Probab=98.28 E-value=7.2e-06 Score=79.36 Aligned_cols=184 Identities=11% Similarity=0.068 Sum_probs=123.2
Q ss_pred HHHHHHHHHHHHhhhhhhchhhhHHHHHHhh-cccccccchhhHHHH-HHHHHHHHHHHhhhhhhhccc---ccC-----
Q 015396 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDF-QIAKREEDIGSYAGY-VGSSFMFGRALTSVFWGLVAD---RYG----- 110 (407)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~~~~~~~g~-~~~~~~~~~~~~~~~~G~l~d---r~G----- 110 (407)
..++.+++..++.......+.--+.++.+.+ |.+.+++ ... +.++..++..+|.+..|.++. |.+
T Consensus 353 ~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~-----~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~ 427 (591)
T PTZ00207 353 ARLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDA-----LNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRV 427 (591)
T ss_pred hhHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCcc-----ceeeehhhhhHHHHhhHHHHHHHHHHHHhhcccccc
Confidence 3455566666665555555555567888888 6633221 122 567777777777777777661 111
Q ss_pred ChHH-HHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHH-H
Q 015396 111 RKPV-IIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIG-P 187 (407)
Q Consensus 111 rr~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~-~ 187 (407)
.|+. +.+..+ ..++.+++++......+++.-++.|++.|...++ ...++|+|. |+-|+-..+......+|..+- -
T Consensus 428 prt~~l~~~~~-~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~ 505 (591)
T PTZ00207 428 PITIALFIPSV-CIITMLTLFLTLPKAALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNR 505 (591)
T ss_pred chhHHHHHHHH-HHHHHHHHHHHCCccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHH
Confidence 1223 333344 6666666666544468999999999999998886 999999999 999999888888888888775 5
Q ss_pred HhhhhhcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHh
Q 015396 188 ALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAF 234 (407)
Q Consensus 188 ~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (407)
.+.|.+.|.-.. ..|-..-.++..++.++++.+..++...+...
T Consensus 506 ~l~G~~Yd~ea~---k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~ 549 (591)
T PTZ00207 506 LLYGEWYTQQAD---KLGQDVCTERVCVVMPLAFLLGLSFLAFITST 549 (591)
T ss_pred HHHHHHHHHHHh---hCCCCeeCCceeeHhHHHHHHHHHHHHHHHHh
Confidence 677777753210 01223445578899999999888887666543
No 243
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.25 E-value=2e-05 Score=70.01 Aligned_cols=275 Identities=12% Similarity=0.061 Sum_probs=138.9
Q ss_pred CchHHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhccc-----ccCCh
Q 015396 38 LPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD-----RYGRK 112 (407)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~d-----r~Grr 112 (407)
...+++..+.+.+.+.+...+... .+|.+.+.-|.|.++ .+...-++. -.-.-+.+.++.| |+|||
T Consensus 28 ~d~~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~------~a~fS~ay~--P~sLKllWaPiVDs~y~k~~Grr 98 (510)
T KOG3574|consen 28 GDRSSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTS------QAIFSFAYW--PFSLKLLWAPIVDSVYSKRFGRR 98 (510)
T ss_pred hhhhhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhh------hhhhhhhhh--HHHHHHHHHhhhHHHHHHhhccc
Confidence 344667778888889999988888 999999888888887 444332221 1234568999999 99999
Q ss_pred HHHHH-HHHHHHHHHHHhhc-----------cchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHH
Q 015396 113 PVIIM-GTASVVIFNTLFGL-----------SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAW 179 (407)
Q Consensus 113 ~~~~~-~~~~~~~~~~~~~~-----------~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~ 179 (407)
|.-+. +..+.+..+...+. .++...+....++.-+..+....+ -...-.+..+++-|.+......+.
T Consensus 99 ksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~ 178 (510)
T KOG3574|consen 99 KSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQ 178 (510)
T ss_pred cceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHH
Confidence 86543 33333333333322 233333434445555555554443 555555666777776666555555
Q ss_pred HHHHHHHHHhhhhhcCCCCCCCCcccccccccCCCChh---HHHHHHHHHHHH-HHHHhccccCCCCCCCCcchhhhhhh
Q 015396 180 GIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFL---PCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYD 255 (407)
Q Consensus 180 ~~g~~~~~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~ 255 (407)
..|.+++..+--.+....-.+....+|.. ..++-. -..+.+...++. .+..++-+|.+.. .. ++....
T Consensus 179 ~~GyfL~~~ifLaL~s~dF~N~y~rs~P~---~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~-~~-~e~~~~--- 250 (510)
T KOG3574|consen 179 TAGYFLGNVVFLALESPDFCNTYLRSIPL---DQGFITLAGYLWFWGALFIVATTLVALLKKENDES-VD-EELELG--- 250 (510)
T ss_pred hhhHHhhcceeeEecChhhhhHHHhcCcC---ccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchh-hh-hhhhcC---
Confidence 55555554332222210000000111110 011100 011222222222 2222322222211 11 100000
Q ss_pred hhhhchhhhhhhhcccccccccccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHH
Q 015396 256 ALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFS 335 (407)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~ 335 (407)
.++..+..+++++-|.++.........-....+-....+.-+.+ +|.+..+.+++.....-.
T Consensus 251 ------------i~~~yk~l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle------~Gv~ke~Lal~~v~~~pl 312 (510)
T KOG3574|consen 251 ------------IHESYKLLRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLE------HGVPKEELALIAVPLVPL 312 (510)
T ss_pred ------------HHHHHHHHHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHH------cCCChhHheeeeeehhhH
Confidence 01122345677777877777666666555555555555554444 788888877665443333
Q ss_pred HHHHHHhHHHHH
Q 015396 336 LLVFQLSLYPFL 347 (407)
Q Consensus 336 ~~~~~~~~~~~l 347 (407)
.++....++.+.
T Consensus 313 qI~l~~~~gk~t 324 (510)
T KOG3574|consen 313 QIALPLYIGKWT 324 (510)
T ss_pred HHhhhhhheeec
Confidence 444433344333
No 244
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.15 E-value=4.2e-06 Score=79.36 Aligned_cols=139 Identities=12% Similarity=0.044 Sum_probs=88.4
Q ss_pred HHHHHHHHHHhhhhhhchhhhHHHHHHh-hcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccc----cCChHHHHH
Q 015396 43 LFSIWIIVLCTALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR----YGRKPVIIM 117 (407)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr----~Grr~~~~~ 117 (407)
++...+..++.....+.+..++|.+.++ .|.+..+ .+.+...+.++.+++.+.+|+++|| ..+|.....
T Consensus 275 vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~------a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~ 348 (495)
T KOG2533|consen 275 VWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQ------ANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIV 348 (495)
T ss_pred HHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHH------hccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 3456677777888888899999988887 5588888 8899999999999999999999999 556665555
Q ss_pred HHHHHHH-HHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccch-hhhhHHHHHHHHHHHHHHH
Q 015396 118 GTASVVI-FNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQ-ALGLSTVSTAWGIGLIIGP 187 (407)
Q Consensus 118 ~~~~~~~-~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r-~~~~~~~~~~~~~g~~~~~ 187 (407)
...+..+ +.+......+.......-+....+.....++ ....++...++.| -...+....+.+.++.++|
T Consensus 349 ~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~ 421 (495)
T KOG2533|consen 349 FLCLYAIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISG 421 (495)
T ss_pred HHHHHHHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhh
Confidence 5444443 4344444433333333333333334444443 6666666655444 3344444445555544444
No 245
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.15 E-value=1.6e-05 Score=67.28 Aligned_cols=107 Identities=17% Similarity=0.120 Sum_probs=82.3
Q ss_pred HHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHh
Q 015396 50 VLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF 129 (407)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~ 129 (407)
+++...+.-...|...++.+.+|....+ +|.+....+-...+...+.|-++|+-|||+.-+.-++...++|+ .
T Consensus 46 yslmmAgDWLQgPYvYyLYstYgFgkG~------IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi-T 118 (454)
T KOG4332|consen 46 YSLMMAGDWLQGPYVYYLYSTYGFGKGD------IGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI-T 118 (454)
T ss_pred HHHHHhhhhhcCceeeeeehhcCccCCc------cceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH-h
Confidence 3334445566678888888899998888 88877777777788889999999999999986666666655554 3
Q ss_pred hccchHHHHHHHHHHHhhhccchhHH--HHHHhhhc
Q 015396 130 GLSVNFWMAVLTRFLLGSLNGLLGPI--KAYACEIF 163 (407)
Q Consensus 130 ~~~~~~~~l~~~r~l~G~~~g~~~~~--~~~~~~~~ 163 (407)
-.++++-.++++|.+.|++.+....+ .-+++|..
T Consensus 119 KhSpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHn 154 (454)
T KOG4332|consen 119 KHSPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHN 154 (454)
T ss_pred hcCCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhh
Confidence 46788999999999999998875553 55778865
No 246
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.13 E-value=6.3e-05 Score=67.13 Aligned_cols=121 Identities=14% Similarity=0.069 Sum_probs=108.0
Q ss_pred HhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccC--ChHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHh
Q 015396 69 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG--RKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLG 146 (407)
Q Consensus 69 ~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G--rr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 146 (407)
+.+|.++.+ .|-+.+...+...+.+....+..||.. -+-.+..++.+..-..++.+.+.....+.++..+--
T Consensus 290 ~rfg~ss~~------~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~s 363 (451)
T KOG2615|consen 290 GRFGYSSMQ------QGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKS 363 (451)
T ss_pred CccCCChhh------heeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHH
Confidence 678999988 888888888888999999999999988 778888888888888888888888888988888888
Q ss_pred hhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 147 SLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 147 ~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
+..+...++ ..++....|.++||.++|+.....+++-++||+++|.+..
T Consensus 364 f~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~ 413 (451)
T KOG2615|consen 364 FSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFS 413 (451)
T ss_pred HHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEE
Confidence 888777776 8889999999999999999999999999999999998876
No 247
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=98.10 E-value=0.0021 Score=59.72 Aligned_cols=306 Identities=12% Similarity=0.108 Sum_probs=163.0
Q ss_pred chHHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHH-HHHHhhhhhhhcccccCChHHHHH
Q 015396 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMF-GRALTSVFWGLVADRYGRKPVIIM 117 (407)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~-~~~~~~~~~G~l~dr~Grr~~~~~ 117 (407)
.++.++.+.+..++..+.++ .+-.+.+.+.++....+. ...+=+..-+ ++.+..++.+++.++..|.+++-.
T Consensus 25 E~~kflpl~Ll~f~I~~ny~----~lR~lKDslvv~~~gae~---I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~ 97 (509)
T COG3202 25 ELKKFLPLALLFFCILFNYN----LLRSLKDSLVVTRQGAES---ISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYI 97 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHHHhhhheEeecCcchh---hHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHH
Confidence 44555555555555555543 444567777666333111 5555555555 567788999999999999999877
Q ss_pred HHHHHHHHHHHhhcc---------c-----------------------hHHHHHHHHHHHhhhccchhH-H-HHHHhhhc
Q 015396 118 GTASVVIFNTLFGLS---------V-----------------------NFWMAVLTRFLLGSLNGLLGP-I-KAYACEIF 163 (407)
Q Consensus 118 ~~~~~~~~~~~~~~~---------~-----------------------~~~~l~~~r~l~G~~~g~~~~-~-~~~~~~~~ 163 (407)
.+..+....+++++. + +.|...+..++.-+-...... . .....|.+
T Consensus 98 ~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeit 177 (509)
T COG3202 98 ILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEIT 177 (509)
T ss_pred HHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 776666666665542 1 113333333344443333333 4 77889999
Q ss_pred cccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhccccCCCCC
Q 015396 164 REEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRH 243 (407)
Q Consensus 164 ~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 243 (407)
..+|-.|..++++.+.+++..++..+..++....... ..-+.....+..+.+.++.+++.+....++.+.-.+.
T Consensus 178 t~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~------~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~ 251 (509)
T COG3202 178 TIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDAL------ASEFKDLLLQILFIVIVILGIIAILLYRYINRNVLTD 251 (509)
T ss_pred hHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhH------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccC
Confidence 9999999999999999999999998888887621100 0000000123333444444444444444432211111
Q ss_pred CCCcchhhhhhhhhhhchhhhhhhhcccccccccccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccchh
Q 015396 244 NDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQ 323 (407)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~ 323 (407)
+.-..+.... ++.+..+..-..+.+.+.++|.++...+...++..+........-.-....+.. ..--.+
T Consensus 252 ~~f~~~~~~k--------k~~~k~k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~--~~~~~~ 321 (509)
T COG3202 252 PLFYLRAKKK--------KKKKKLKLGLIESFKMILRSKYLGAIALLVLAYGVSINLVEGVWKSGIKELYPT--TNEYTA 321 (509)
T ss_pred cchhHHHhcc--------cccccccCcHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCC--hhHHHH
Confidence 1000000000 000000011123455667788887776666665544333332221111111000 000122
Q ss_pred hHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHHHH
Q 015396 324 MVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPL 367 (407)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 367 (407)
-.|-+....++...+...+.++-+.+|.|=.....+.-+...+.
T Consensus 322 f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv~lit 365 (509)
T COG3202 322 FMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPLVMLIT 365 (509)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHH
Confidence 23445666777766666678888889888766655555444444
No 248
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.09 E-value=2.8e-05 Score=73.28 Aligned_cols=124 Identities=20% Similarity=0.281 Sum_probs=108.9
Q ss_pred HHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhh-hcccccCChHHHHHHHHHHHHHHHHhhccchHHHHHHHHHH
Q 015396 66 FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWG-LVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFL 144 (407)
Q Consensus 66 ~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G-~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 144 (407)
+....++.++.+ .+...+...+...+++++.. .+...+|-|+++..|+..-.+.....+++++.|+.+....+
T Consensus 267 yl~~~f~w~~~~------~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~ 340 (463)
T KOG2816|consen 267 YLKAKFGWNKKE------FSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVV 340 (463)
T ss_pred EEeeecCcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHH
Confidence 445678999988 88888888888888888777 78888999999999999999999999999999999999988
Q ss_pred HhhhccchhHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 145 LGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 145 ~G~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
.++.........+.++.+.+++++|++.++.....++...++|.+-+.+..
T Consensus 341 ~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 341 VALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred HHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 888765655569999999999999999999999999999999998888764
No 249
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.01 E-value=0.00031 Score=68.43 Aligned_cols=142 Identities=19% Similarity=0.144 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhccchHHH---HHHHHHHHhhhccc-hhHHHHHHhh
Q 015396 86 YVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWM---AVLTRFLLGSLNGL-LGPIKAYACE 161 (407)
Q Consensus 86 ~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~r~l~G~~~g~-~~~~~~~~~~ 161 (407)
+................+...|++|||.....+.++..++++..++..+... ..+...+..++.+. ......+.+|
T Consensus 354 ~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 433 (521)
T KOG0255|consen 354 LNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAE 433 (521)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333333345555566689999999999999999999999999888654432 34444444444444 3334889999
Q ss_pred hccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcccccccccCCCChhHHHHHHHHHH-HHHHHHhccccCC
Q 015396 162 IFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAF-GVTIAAFWLPETL 240 (407)
Q Consensus 162 ~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~~ 240 (407)
.+|...|..+.+..+....+|.+++|.+....... . ......+.+.... ..++...++||+.
T Consensus 434 l~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~---------------~--~~~~~~~~~~~~~l~~~~~~~~lpet~ 496 (521)
T KOG0255|consen 434 LIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQM---------------F--PLLGLILFGWLALLLGLLSLLLLPETK 496 (521)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---------------c--ccchHHHHHHHHHHHHHHHHhcCcccC
Confidence 99999999999999999999999999887665431 0 0111122233333 3445558899987
Q ss_pred CCCC
Q 015396 241 HRHN 244 (407)
Q Consensus 241 ~~~~ 244 (407)
....
T Consensus 497 ~~~l 500 (521)
T KOG0255|consen 497 GKPL 500 (521)
T ss_pred CCCC
Confidence 7654
No 250
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.01 E-value=0.0011 Score=63.10 Aligned_cols=302 Identities=12% Similarity=0.134 Sum_probs=152.7
Q ss_pred chHHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHH-HHHHhhhhhhhcccccCChHHHHH
Q 015396 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMF-GRALTSVFWGLVADRYGRKPVIIM 117 (407)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~-~~~~~~~~~G~l~dr~Grr~~~~~ 117 (407)
.+++++.+.+..++..+.++ .+-.+.+.+=++....+. +..+=....+ +..+......+++||++|.+++-.
T Consensus 22 E~~k~~~l~~m~f~i~f~y~----~lR~~KD~lvvt~~gae~---I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~ 94 (491)
T PF03219_consen 22 ELKKFLPLALMFFFILFNYT----ILRDLKDTLVVTAQGAEV---IPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYI 94 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHHHhcCeEEEecCChhH---HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 34556666666666555543 333444444333222110 3333332222 345567789999999999998877
Q ss_pred HHHHHHHHHHHhhcc---------c----------------------hHHHHHHHHHHHhhhccch-hHH-HHHHhhhcc
Q 015396 118 GTASVVIFNTLFGLS---------V----------------------NFWMAVLTRFLLGSLNGLL-GPI-KAYACEIFR 164 (407)
Q Consensus 118 ~~~~~~~~~~~~~~~---------~----------------------~~~~l~~~r~l~G~~~g~~-~~~-~~~~~~~~~ 164 (407)
....+.....++++. + +.|...+..++.-+-+... ... ..+..|.++
T Consensus 95 ~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt 174 (491)
T PF03219_consen 95 IIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITT 174 (491)
T ss_pred HHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 666665555444431 1 1122333333333433333 334 888999999
Q ss_pred ccchhhhhHHHHHHHHHHHHHHHHhhhhhcC-CCCCCC-CcccccccccCCCChhHHHHHHHHHHHHHHHHhccccCCCC
Q 015396 165 EEHQALGLSTVSTAWGIGLIIGPALGGFLAQ-PAEKYP-NLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHR 242 (407)
Q Consensus 165 ~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~-~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 242 (407)
.+|-.|..+++..+.++|.+++..+..++.+ .....+ ..-.|... ......+..+.+++.+....++.+....
T Consensus 175 ~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~-----l~~l~~~v~~~g~~i~~~~~~~~~~vl~ 249 (491)
T PF03219_consen 175 VEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELS-----LNSLMGIVLILGIVIILLYRYMNKNVLT 249 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHH-----HHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 9999999999999999999999888888776 111000 00111110 1111112222222223333333322111
Q ss_pred CCCCcchhhhhhhhhhhchhhhhhhhcccccccccccccchhHHHHHHHHHHhhccchhhhHHhhhccCCCccCccccch
Q 015396 243 HNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYST 322 (407)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~ 322 (407)
.+...++.+. ++.++.+..-....+.++++|.+....+...++..........+-......+... ..++.
T Consensus 250 ~~~~~~~~~~---------~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~-~~ysa 319 (491)
T PF03219_consen 250 DPRFYPSAKK---------KKKKKPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDP-NDYSA 319 (491)
T ss_pred ccccchhhhc---------ccccCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCc-hHHHH
Confidence 1110000000 0000001112235567788888887776666655544433333322222211110 12222
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHH
Q 015396 323 QMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLT 364 (407)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 364 (407)
-.|-.....++..++.. ++++.+.+|+|-+....+.-+..
T Consensus 320 -fmG~~~~~tGivtii~~-~l~~~iir~~GW~~~AlitPiv~ 359 (491)
T PF03219_consen 320 -FMGKFSSWTGIVTIIMM-FLSSNIIRRFGWRTAALITPIVI 359 (491)
T ss_pred -HHHHHHHHHHHHHHHHH-HHHHHHHHHhhHHHHHHHhHHHH
Confidence 24555666777777777 57889999999777666544333
No 251
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.00 E-value=6.3e-05 Score=72.65 Aligned_cols=195 Identities=18% Similarity=0.157 Sum_probs=127.3
Q ss_pred HHHHHHHHHHHHhhhhhhchhhhHHHHH-Hhhccccc---ccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCC-hHHH
Q 015396 41 TELFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKR---EEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGR-KPVI 115 (407)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~---~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Gr-r~~~ 115 (407)
|.+....+..++.++.......+.|... .-++-+.. + .++....+.++..+++.+.|.+..+++| |..+
T Consensus 310 r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~------~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~l 383 (599)
T PF06609_consen 310 RGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITE------IGWISSPVGFGSCAGAVILGLLFSKIRHIKWQL 383 (599)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccce------eehhhhhHHHHHHHHHHHHHHHHHHccchhHHH
Confidence 3344444555566655555555666443 34444432 3 6778888888889999999999999888 5555
Q ss_pred HHHHHHHHHHHHHhhc--cchHHHHHHHHHHHhhhccchhH-HHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhh
Q 015396 116 IMGTASVVIFNTLFGL--SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGF 192 (407)
Q Consensus 116 ~~~~~~~~~~~~~~~~--~~~~~~l~~~r~l~G~~~g~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 192 (407)
+++.++..+++-+++. .+|....+..-++.|++.|.... ......-..|+++-+.+.++....-.+|+.+|..+-.-
T Consensus 384 i~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~ 463 (599)
T PF06609_consen 384 IFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNA 463 (599)
T ss_pred HHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 6777666655444443 34555666777889998777555 46666667788999999999988888888887765533
Q ss_pred hcCCC-C--------------CCC--------------------Cccc------------ccccccCCCChhHHHHHHHH
Q 015396 193 LAQPA-E--------------KYP--------------------NLFS------------SESLFGKFPYFLPCLCISLF 225 (407)
Q Consensus 193 l~~~~-~--------------~~~--------------------~~~g------------w~~~~~~~~~~~~~~~~~~~ 225 (407)
+..+. . +.+ ..-| -+..| ..+++.+++.....
T Consensus 464 I~~n~~~~~l~~~v~~a~~~aglp~~sl~~li~a~~~~~~~a~~~iPGit~~i~~a~~~A~~~aY-a~ay~~V~~~siaF 542 (599)
T PF06609_consen 464 IFTNKLPKELPKYVAPAALAAGLPESSLPALIEALAAGNLEALAAIPGITPEIIAAVVAAFQEAY-AHAYRYVYYSSIAF 542 (599)
T ss_pred HHHhhhhHhHHHHHHHHHHhcCCChhhHHHHHHHHhccChhHHhhCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 22110 0 000 0000 12334 55678888888888
Q ss_pred HHHHHHHHhccccCCCC
Q 015396 226 AFGVTIAAFWLPETLHR 242 (407)
Q Consensus 226 ~~~~~~~~~~~~e~~~~ 242 (407)
+++.++..++++|..+.
T Consensus 543 G~vaiiaa~fl~d~~~~ 559 (599)
T PF06609_consen 543 GVVAIIAALFLGDIDKY 559 (599)
T ss_pred HHHHHHHHHHcCChHHh
Confidence 88888888888876543
No 252
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.73 E-value=0.00046 Score=65.81 Aligned_cols=111 Identities=14% Similarity=0.057 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcccccCC--h----HH-HHHHHHHHHHHHHHhhcc---------chHHHHHHHHHHHhh
Q 015396 84 AGYVGSSFMFGRALTSVFWGLVADRYGR--K----PV-IIMGTASVVIFNTLFGLS---------VNFWMAVLTRFLLGS 147 (407)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~G~l~dr~Gr--r----~~-~~~~~~~~~~~~~~~~~~---------~~~~~l~~~r~l~G~ 147 (407)
.+|.+++..+.-++.+|+.+++-.|.+| | +. +.+++++.+++.+++.++ .+.+++++..++.++
T Consensus 310 ~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~ 389 (493)
T PRK15462 310 TAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGF 389 (493)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHH
Confidence 6888999999888889888887666633 2 11 566777777776555321 367889999999999
Q ss_pred hccchhHH-HHHHhhhccccchhhhhHHHHHH-HHHHHHHHHHhhhhhc
Q 015396 148 LNGLLGPI-KAYACEIFREEHQALGLSTVSTA-WGIGLIIGPALGGFLA 194 (407)
Q Consensus 148 ~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~-~~~g~~~~~~~~~~l~ 194 (407)
|+-...|. .+++++..|++.|++.+|.+... ..+|..++..+++...
T Consensus 390 gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~~ 438 (493)
T PRK15462 390 AELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQTS 438 (493)
T ss_pred HHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99998887 99999999999999999999663 4677777777766654
No 253
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.65 E-value=0.00047 Score=47.48 Aligned_cols=71 Identities=17% Similarity=0.219 Sum_probs=57.9
Q ss_pred HHHHHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHH
Q 015396 286 SSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVL 363 (407)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 363 (407)
..-..+++..........+++.|..+ .|+|+.++|.+.++..+..+++.. +.+.+.||.++++.......+
T Consensus 4 ~lk~~yf~~f~~~g~~~Pfl~~~~~~------~Gl~~~~iGil~~i~~~~~~~~~p-l~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 4 PLKAFYFFYFAALGCLYPFLPLYLKQ------LGLSPSQIGILSAIRPLIRFLAPP-LWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHhhhh------cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCccHHHHHHHHH
Confidence 34456666777777777788888876 799999999999999999999984 899999999998887665544
No 254
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=97.61 E-value=0.0028 Score=59.08 Aligned_cols=285 Identities=13% Similarity=0.110 Sum_probs=129.8
Q ss_pred HHHHHHHHHhhhhhhchhhhHHHHHHh--hcccccccchhhHHHHHHHHHHHHHHHhhhhhhhccc-----ccCChHHHH
Q 015396 44 FSIWIIVLCTALPISSLFPFLYFMIKD--FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD-----RYGRKPVII 116 (407)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~d-----r~Grr~~~~ 116 (407)
..+.+.+++.+...+.....+|.+.++ -+.|.++ .+.+.-+ ...+ -.-++|.++.| |+||||..+
T Consensus 3 ~lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q------~~~fSla-~~Pf-SlKlLWaPiVDs~y~~~~GRRKSWi 74 (544)
T PF13000_consen 3 ALLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQ------QAIFSLA-SYPF-SLKLLWAPIVDSVYSKRIGRRKSWI 74 (544)
T ss_pred eHHHHHHHHcCcccccccccchhhhccccCCCChhH------heeeeee-echh-HHHHhhhhhhhhhcccccCCcchhh
Confidence 356677888888888777788988888 7888887 4432211 0010 12345666666 899998765
Q ss_pred HH-HHHHHHHHHHhhccc------------------------hHHHHHHHHHHHhhhccchhH-HHHHHhhhccccchhh
Q 015396 117 MG-TASVVIFNTLFGLSV------------------------NFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQAL 170 (407)
Q Consensus 117 ~~-~~~~~~~~~~~~~~~------------------------~~~~l~~~r~l~G~~~g~~~~-~~~~~~~~~~~~~r~~ 170 (407)
+- ..+.++..+..+... +...+....++.=+-.+.... +-...-....+++++.
T Consensus 75 iP~Q~l~g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ 154 (544)
T PF13000_consen 75 IPIQYLSGILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGY 154 (544)
T ss_pred hHHHHHHHHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcch
Confidence 42 233333333322111 111222222222222222222 1223333345677777
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhcCCC--CCCCCcccccccccCCCChh---HHHHHHHHHH-HHHHHHhccccCCCCCC
Q 015396 171 GLSTVSTAWGIGLIIGPALGGFLAQPA--EKYPNLFSSESLFGKFPYFL---PCLCISLFAF-GVTIAAFWLPETLHRHN 244 (407)
Q Consensus 171 ~~~~~~~~~~~g~~~~~~~~~~l~~~~--~~~~~~~gw~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~e~~~~~~ 244 (407)
+..-...+.++|..++..+--.+-+.. +.| +|..-...|.-. -..+-+...+ +...+.++-+|.+....
T Consensus 155 ASTcqtvG~~~Gyfls~tvFlalns~~f~Nky-----~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~~~k~E~~~~~~ 229 (544)
T PF13000_consen 155 ASTCQTVGQTAGYFLSFTVFLALNSPDFCNKY-----LRSTPSDEGLVTLSGYLKFWGWVFLIVTILVAFFKKEKPHSES 229 (544)
T ss_pred HHHHHHhHhhhhHHHHHHHHHhhCCHHHHHHh-----cccCCCCCCeeeHHHHHHHHHHHHHHHHHHHheEeeccccccc
Confidence 766666666666666554433332210 000 111100111100 0112222222 23344455555543221
Q ss_pred CCc-ch----hhhhh-hhhhhchhh--hhhh---hcccccccccccccchhHHHHHHHHHHhhccchhhhHHhhhccCCC
Q 015396 245 DDD-DS----CDVSY-DALESASAE--VKEE---EGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPK 313 (407)
Q Consensus 245 ~~~-~~----~~~~~-~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (407)
..+ +. ++..+ ...+..+++ ..++ .++.-+...+++|.|++..+++.....-...........+=+.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlE-- 307 (544)
T PF13000_consen 230 LPKIEPINKSDGKSKEISIEYDESDVISTEEILSIKDVYKSLWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLE-- 307 (544)
T ss_pred CccccccccccccccccceecccccccchhhhhhHHHHHHHHHHHHcCchHHHHHHHHHHHHhccccchhhhHHHHHH--
Confidence 111 00 00000 000000100 0111 11112334566778888888877777666655555544443333
Q ss_pred ccCccccchhhHHHHHHHHHHHHHHHHHhHHHHH
Q 015396 314 KLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFL 347 (407)
Q Consensus 314 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l 347 (407)
.|++.++.+.+..+..=..++..+.++.|.
T Consensus 308 ----kG~~KE~LAl~~li~~P~qii~~~~~~Kws 337 (544)
T PF13000_consen 308 ----KGLSKEDLALLVLIDFPFQIILPYYIGKWS 337 (544)
T ss_pred ----cCCCHHHhHHHHHHhhhHHHHHHHHhhhhh
Confidence 788888877766554444444444344443
No 255
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.51 E-value=0.0032 Score=57.94 Aligned_cols=108 Identities=17% Similarity=0.243 Sum_probs=75.4
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHH--HHHHHHH---HHhhccchHHHHHHHHHHHhhhccchhH-HHH
Q 015396 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT--ASVVIFN---TLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKA 157 (407)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~--~~~~~~~---~~~~~~~~~~~l~~~r~l~G~~~g~~~~-~~~ 157 (407)
..+....|.+|-.++.--.-.+ |+ |++.+.+. .+..+.. ..+-+.++.|..++.-+..|+.+|...+ ...
T Consensus 283 Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~ 358 (402)
T PF02487_consen 283 YRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFY 358 (402)
T ss_pred HHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 6677777887766664433222 44 33333322 2222222 2333467889999999999998787666 577
Q ss_pred HHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 158 YACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 158 ~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
.+.|-.|+++|-.+++....+-++|..++.+++-.+-.
T Consensus 359 ~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le~ 396 (402)
T PF02487_consen 359 RISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLEP 396 (402)
T ss_pred HHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 88888899999999999999999999999888866543
No 256
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=97.49 E-value=0.00067 Score=59.87 Aligned_cols=101 Identities=17% Similarity=0.137 Sum_probs=85.9
Q ss_pred HHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhhccchhHHHHHHhhhccccchhhhhHH
Q 015396 95 RALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLST 174 (407)
Q Consensus 95 ~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~~~~~~~~~r~~~~~~ 174 (407)
+.+.-.+.=.+.|-.-.|++++.-.+.......+..+.++.+.+-+.-+..|...+.-..-++++-+..+++++.++.+.
T Consensus 55 YLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tAaEIAYysYIYs~Vd~~~Yqrvt~y 134 (433)
T KOG3810|consen 55 YLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATAAEIAYYSYIYSKVDPEMYKRVTGY 134 (433)
T ss_pred HHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHHHHHhhhheeeeecCHHHHHHHHHH
Confidence 44555666678999989999988888778888888889999999888888888876666668899999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhcC
Q 015396 175 VSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 175 ~~~~~~~g~~~~~~~~~~l~~ 195 (407)
.....-.|-..|..++..+..
T Consensus 135 ~RaA~L~g~~~g~vlaQlLvs 155 (433)
T KOG3810|consen 135 CRAAFLVGKFVGSVLAQLLVS 155 (433)
T ss_pred hHHHHHHHhHHHhHHHHHHhh
Confidence 999999999999999988886
No 257
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.45 E-value=0.00078 Score=62.54 Aligned_cols=107 Identities=16% Similarity=0.228 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHHHHHHhhccc---------hHHHHHHHHHHHhhhccchhHH-HHHHhhhcccc---chhhhhHHHHHHH
Q 015396 113 PVIIMGTASVVIFNTLFGLSV---------NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE---HQALGLSTVSTAW 179 (407)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~---------~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~---~r~~~~~~~~~~~ 179 (407)
|+++++.++..+|.++..++. +.+.++++..+.++|.|..-|. .++.+|.++++ +|.+.+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 567788888888888744321 2367888899999999999886 99999999865 4667788899999
Q ss_pred HHHHHHHHHhhhhhcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhc
Q 015396 180 GIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFW 235 (407)
Q Consensus 180 ~~g~~~~~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (407)
++|..+++.+.+++.+ +++|...|.+.++..+++++....
T Consensus 82 n~G~~~~~~~~~~i~~----------------~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQ----------------NYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHCCCHHHH----------------CS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhHhhcccchhhcc----------------ccchhhhhhHHHHHHHHHHHHHHh
Confidence 9999999999999987 667777778777776666655443
No 258
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.23 E-value=0.00068 Score=62.11 Aligned_cols=144 Identities=17% Similarity=0.077 Sum_probs=91.6
Q ss_pred HHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCC-hHHHHHHHHHHHH
Q 015396 46 IWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGR-KPVIIMGTASVVI 124 (407)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Gr-r~~~~~~~~~~~~ 124 (407)
+..++.+.....+.....+......-|.+... .|++.....++..+++...|.+.||... |..++.......+
T Consensus 271 l~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~------aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v 344 (480)
T KOG2563|consen 271 LAICYGIGLGLFNSLSTLLNLALCPSGYEGVF------AGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALV 344 (480)
T ss_pred HHHHHhhhHHHHHHHHHHhhhccccccCCccc------cchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHH
Confidence 33333333333344444444334444666556 8999999999999999999999999876 5555555555555
Q ss_pred HHHHh-hc---cchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 125 FNTLF-GL---SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 125 ~~~~~-~~---~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
+.... .+ ..+.+.++....+.|++.....|. .-+-.|..-|..-+.-.|+.+....+-+++-..+.+.+.+
T Consensus 345 ~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~ 420 (480)
T KOG2563|consen 345 GTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAE 420 (480)
T ss_pred HHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhh
Confidence 53221 11 223455666667788876666675 7777777655555666777766666666666666677665
No 259
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.23 E-value=0.00077 Score=63.76 Aligned_cols=149 Identities=15% Similarity=0.186 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhcc----------chHHHHHHHHHHHhhhccc-h
Q 015396 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS----------VNFWMAVLTRFLLGSLNGL-L 152 (407)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~----------~~~~~l~~~r~l~G~~~g~-~ 152 (407)
.|.+..+..++..++..+...+.-+..-|+++.++.++..+..+....- ++.+..+.--++..+..+. .
T Consensus 257 ~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~ 336 (433)
T PF03092_consen 257 YGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIGMIAF 336 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHHHHHH
Confidence 7777777888888888888888778888999988888777665543221 1222223333455554444 5
Q ss_pred hHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcccc-cccccCCCChhHHHHHHHHHHHHHH
Q 015396 153 GPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSS-ESLFGKFPYFLPCLCISLFAFGVTI 231 (407)
Q Consensus 153 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw-~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (407)
.|...+++|..|+...|...++.....++|..++..++..+.+. ++. +.-| .+.+...++..+..++.+.
T Consensus 337 mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~-------~~vt~~~f--~~l~~lili~~~~~ll~l~ 407 (433)
T PF03092_consen 337 MPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMEL-------FGVTRDDF--SNLWLLILICSVIQLLPLP 407 (433)
T ss_pred HHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------cCCCcccc--cchHHHHHHHHHHHHHHHH
Confidence 56688999999999999999999999999999999999999873 332 1112 1122233444444455555
Q ss_pred HHhccccCCC
Q 015396 232 AAFWLPETLH 241 (407)
Q Consensus 232 ~~~~~~e~~~ 241 (407)
...++|++.+
T Consensus 408 ll~lLp~~~~ 417 (433)
T PF03092_consen 408 LLFLLPPQKR 417 (433)
T ss_pred HHHHcCCCch
Confidence 5566776544
No 260
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=96.98 E-value=0.0043 Score=57.26 Aligned_cols=114 Identities=16% Similarity=0.175 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcccccC-------ChHHHHHHHHHHHHHH----HHhh-ccchHHHHHHHHHHHhhhccc
Q 015396 84 AGYVGSSFMFGRALTSVFWGLVADRYG-------RKPVIIMGTASVVIFN----TLFG-LSVNFWMAVLTRFLLGSLNGL 151 (407)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~G~l~dr~G-------rr~~~~~~~~~~~~~~----~~~~-~~~~~~~l~~~r~l~G~~~g~ 151 (407)
.-++..+...+..+|.++.|.++||+- |.+.=.....+.+..+ ++.. +..+...+....++.|.....
T Consensus 285 ~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~ 364 (493)
T KOG1330|consen 285 TLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISW 364 (493)
T ss_pred chhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHh
Confidence 556677788888999999999999842 2222222222222211 1111 122333333444566654333
Q ss_pred hh-HH-HHHHhhhccccchhhhhHHH-HHHHHHHHHHHHHhhhhhcCCC
Q 015396 152 LG-PI-KAYACEIFREEHQALGLSTV-STAWGIGLIIGPALGGFLAQPA 197 (407)
Q Consensus 152 ~~-~~-~~~~~~~~~~~~r~~~~~~~-~~~~~~g~~~~~~~~~~l~~~~ 197 (407)
.. .. .-+..|..|+++|..+.++- .....+|.+-+|.+-|.+.+..
T Consensus 365 ~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l 413 (493)
T KOG1330|consen 365 FNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKL 413 (493)
T ss_pred cccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHh
Confidence 22 23 66788999999999999987 4455667777777888998853
No 261
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=96.96 E-value=0.00041 Score=64.88 Aligned_cols=86 Identities=21% Similarity=0.367 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHH-HH
Q 015396 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM-GT 119 (407)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~-~~ 119 (407)
|.+..+=+..++.+...+.+.|.++.+.+++|+++++ .|.++..-.+..+++.|++|+++||+-+||.+++ ++
T Consensus 11 r~l~~~k~f~~~~~~~~g~l~pll~vy~kQLGl~p~~------~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl 84 (618)
T KOG3762|consen 11 RALIVAKLFYLFFGARFGSLFPLLAVYFKQLGLNPAV------VGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSL 84 (618)
T ss_pred hhhheeeeeeeeeeecccccchHHHHHHHHcCCCHHH------hhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHH
Confidence 3344444456666777888999999999999999999 9999999999999999999999999987665554 55
Q ss_pred HHHHHHHHHhhcc
Q 015396 120 ASVVIFNTLFGLS 132 (407)
Q Consensus 120 ~~~~~~~~~~~~~ 132 (407)
+....+.++..+.
T Consensus 85 ~~~v~a~fll~fv 97 (618)
T KOG3762|consen 85 LLSVTATFLLVFV 97 (618)
T ss_pred HHHHHHHHheeec
Confidence 6666666666554
No 262
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=96.83 E-value=0.017 Score=54.07 Aligned_cols=109 Identities=16% Similarity=0.162 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcccccCCh-------HHHHHHHHHHHHHHHHhhcc----------chHHHHHHHHHHHh
Q 015396 84 AGYVGSSFMFGRALTSVFWGLVADRYGRK-------PVIIMGTASVVIFNTLFGLS----------VNFWMAVLTRFLLG 146 (407)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~G~l~dr~Grr-------~~~~~~~~~~~~~~~~~~~~----------~~~~~l~~~r~l~G 146 (407)
.++.++...+.-++.+|+..++.-+.++| .=+-++.++.+.+.++.... .+.++++...++++
T Consensus 326 ~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s 405 (498)
T COG3104 326 PAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQS 405 (498)
T ss_pred HHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHH
Confidence 68899999999899998888888775544 12345555555555444332 36889999999999
Q ss_pred hhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhh
Q 015396 147 SLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGF 192 (407)
Q Consensus 147 ~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 192 (407)
++.=+..|. .+++....|++-.+..++.+......|..++..+++.
T Consensus 406 ~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~ 452 (498)
T COG3104 406 FGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGL 452 (498)
T ss_pred HHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceeccc
Confidence 999888886 9999999999999999999998888888888777774
No 263
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=96.81 E-value=0.042 Score=53.60 Aligned_cols=152 Identities=13% Similarity=0.056 Sum_probs=106.6
Q ss_pred CchHHHHHHHHHHHHhhhhh-hchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccc-cCChHHH
Q 015396 38 LPITELFSIWIIVLCTALPI-SSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVI 115 (407)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr-~Grr~~~ 115 (407)
..|+....+.....+.-+.. +.....+.++.++++.+... +.-..+.+.-......+..++++|- +||-+++
T Consensus 34 g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~------aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI 107 (571)
T KOG1237|consen 34 GGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGG------AANNVNAFGGTQFLLPLLGAFLADSFLGRYFTI 107 (571)
T ss_pred chhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHH------HHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHH
Confidence 34444444444444444433 33466777888899988876 7777777777777888999999996 4898999
Q ss_pred HHHHHHHHHHHHHhhccc-------------------------hHHHHHHHHHHHhhhccchhHH-HHHHhhhcc---cc
Q 015396 116 IMGTASVVIFNTLFGLSV-------------------------NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR---EE 166 (407)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~-------------------------~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~---~~ 166 (407)
.++.++..++..+..++. ....++.+.-+..+|.|..-++ .+.-+|.++ ++
T Consensus 108 ~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~ 187 (571)
T KOG1237|consen 108 NIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPV 187 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcc
Confidence 988888887754443211 1134555666667788887776 888899998 32
Q ss_pred -ch--hhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 167 -HQ--ALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 167 -~r--~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
.+ ...+.++....++|..++..+-.+.-+
T Consensus 188 ~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~ 219 (571)
T KOG1237|consen 188 EVKGIPSFFNWFYFSQNGGALLAQTVLVYIQD 219 (571)
T ss_pred hhhCcccchhHHHHHHHHHHHHHHHHHHhhhh
Confidence 22 367788889999999999888888766
No 264
>PRK03612 spermidine synthase; Provisional
Probab=96.75 E-value=0.086 Score=51.09 Aligned_cols=122 Identities=16% Similarity=0.129 Sum_probs=70.6
Q ss_pred HHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHH---HH-HHhh---ccchH-HH
Q 015396 66 FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI---FN-TLFG---LSVNF-WM 137 (407)
Q Consensus 66 ~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~---~~-~~~~---~~~~~-~~ 137 (407)
.+..-+|-+... .+.+.+++..|..+|+.+.|++.++.-++.. ..-..+..+ +. ++.. ..... ..
T Consensus 40 ~l~~~~G~s~~~------~~~ii~~fl~glalGs~l~~~~~~~~~~~~~-~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~ 112 (521)
T PRK03612 40 LASYLLGDSVTQ------FSTVIGLMLFAMGVGALLSKYLLRDAAAGFV-AVELLLALLGGLSALILYAAFAFQGLSRLL 112 (521)
T ss_pred HHHHHhCchHHH------HHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444456777777 8999999999999999999988744322222 111111111 11 1111 11111 12
Q ss_pred HHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 138 AVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 138 l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
++...++.++..|...|. ..+..+. ..++-++..|-......+|.++|.++.+++.-
T Consensus 113 ~~~~~~~~~~l~G~~~Pl~~~~~~~~-~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLl 170 (521)
T PRK03612 113 LYVLVLLIGLLIGMEIPLLMRILQRI-RDQHLGHNVATVLAADYLGALVGGLAFPFLLL 170 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc-cccchhhhhhhhHhHHhHHHHHHHHHHHHHHH
Confidence 233334556666666664 4444332 22234567788888888999999988888764
No 265
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=96.69 E-value=0.02 Score=53.80 Aligned_cols=88 Identities=14% Similarity=0.116 Sum_probs=65.8
Q ss_pred cccchhh-HHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHHHHHhhhhHHHhhhhhhhH---hhhh--hhHH
Q 015396 318 LNYSTQM-VGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLA---FLLN--CASV 391 (407)
Q Consensus 318 ~g~s~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~ 391 (407)
+|++..+ .|.+.+....+..+..+ .++++.||+|.|+++..+.+...+..++.++.......... ..++ ....
T Consensus 56 lglT~~qv~G~I~s~F~ysYal~qI-p~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~llGvaEA~~~A 134 (511)
T TIGR00806 56 LNFTEETVTNEIIPVLPYSHLAVLV-PVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFYSVTMAARIA 134 (511)
T ss_pred cCCCHHHhcchHHHHHHHHHHHHHH-HHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999 99999999999999985 88999999999999999999988888888776554433221 1111 1113
Q ss_pred HHHHHhhcCCCCCCC
Q 015396 392 VKNLLSSSGPGSKRS 406 (407)
Q Consensus 392 ~~~~~~~~~p~~~rs 406 (407)
....+..-+|++.|+
T Consensus 135 ~~syI~~WfP~kER~ 149 (511)
T TIGR00806 135 YSSYIFSLVPPSRYQ 149 (511)
T ss_pred HHHHHHHHCCHHHHH
Confidence 345566677776653
No 266
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.68 E-value=0.025 Score=52.99 Aligned_cols=138 Identities=8% Similarity=-0.106 Sum_probs=94.9
Q ss_pred HhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhh-
Q 015396 52 CTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG- 130 (407)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~- 130 (407)
+.++..-.+...+..+...-|+++.. +|..-+...+....+.+...++.+|+|..|.=+++...-.++..++.
T Consensus 269 lLY~TVLsf~~lmt~yl~~~G~s~~~------igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~ 342 (432)
T PF06963_consen 269 LLYFTVLSFGGLMTAYLKSQGYSPSV------IGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVV 342 (432)
T ss_pred HHHHHHhcCcHHHHHHHHHCCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHH
Confidence 33333334456666666666999998 99999999999999999999999999998887776654443332222
Q ss_pred --cc---c----hHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 131 --LS---V----NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 131 --~~---~----~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
+. + +...++.+-.+.-+|-=.+..+ .-++.|..|+++||...|.-....++-..+-..++-.+.+
T Consensus 343 ~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~~~ 417 (432)
T PF06963_consen 343 SFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIFPR 417 (432)
T ss_pred HHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 11 1 2223333333333342234444 7788999999999999999999999888887776654443
No 267
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=96.65 E-value=0.27 Score=43.59 Aligned_cols=67 Identities=16% Similarity=0.200 Sum_probs=47.6
Q ss_pred HHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhc
Q 015396 96 ALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIF 163 (407)
Q Consensus 96 ~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~ 163 (407)
+..+++.+.+..++|-|..+.++.......... =+-+.+..++-.-...|++.+..... -+|+++.-
T Consensus 72 ~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~-Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g 139 (390)
T KOG3097|consen 72 IDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAA-NLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMG 139 (390)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh-hcchhHHhhccHHHhhccccccccccCcceecHHH
Confidence 345555568899999999998887766654322 23466788888999999998886664 55555544
No 268
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=96.64 E-value=0.0039 Score=58.63 Aligned_cols=158 Identities=10% Similarity=0.153 Sum_probs=90.5
Q ss_pred CCCchHHHHHHHHHHHHhhhhhhchhhhH-HHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcc-cccCChH
Q 015396 36 SGLPITELFSIWIIVLCTALPISSLFPFL-YFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVA-DRYGRKP 113 (407)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~-dr~Grr~ 113 (407)
.+..+...+.+....+...+.....-... +.....++.+.++ ...+.|...++..+-.....+..+... -++.+|+
T Consensus 257 ~~~d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~--av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~ 334 (488)
T KOG2325|consen 257 PKLDWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSE--AVLYNGITLSISGILSVILLLLYIFTRLGKIDKRR 334 (488)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccch--HHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhccce
Confidence 34455555555555555444443323333 3445556777665 223345555554444444444444433 3334566
Q ss_pred HHHHHHHHHHHHHHHhhcc-------------------------------chHHHHHHHH-HHHhhhccchhH-HHHHHh
Q 015396 114 VIIMGTASVVIFNTLFGLS-------------------------------VNFWMAVLTR-FLLGSLNGLLGP-IKAYAC 160 (407)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~-------------------------------~~~~~l~~~r-~l~G~~~g~~~~-~~~~~~ 160 (407)
.+..+.++......+.... .+.+.+++.+ ++.|.+.-.... ..++-+
T Consensus 335 ~~~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlyS 414 (488)
T KOG2325|consen 335 IILLGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYS 414 (488)
T ss_pred eeeehHHHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhheeccccccccchHHHHHH
Confidence 5555544443333322110 1123334443 444555444444 488999
Q ss_pred hhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 161 EIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 161 ~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
|...|++++...+.++....++..+||++......
T Consensus 415 kiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~ 449 (488)
T KOG2325|consen 415 KILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFT 449 (488)
T ss_pred HHhCCccccceeEEEEeccchhhhhhHHHHhhhHH
Confidence 99999999999999999999999999999988887
No 269
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=96.38 E-value=0.46 Score=43.79 Aligned_cols=121 Identities=14% Similarity=0.135 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHH
Q 015396 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (407)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~ 121 (407)
..+..++..+-.....+++....+++.+++-.+..+ .......+....+...+....--.+.-|. |+++.....+.
T Consensus 19 v~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~~---~~F~~~~~~~a~i~~ll~~~~n~~~~~~~-~~~~~~~l~~~ 94 (406)
T KOG1479|consen 19 VYLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHNS---KNFTSSYTLAAQIPLLLFNLLNAFLNTRL-RTRVGYLLSLI 94 (406)
T ss_pred HHHHHHHHhcccccchHhhhccHHHHHhhcCCCchH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 334455555555667788888888888776433332 11133333333444444444555555552 22221111111
Q ss_pred HHHHHHHh--hc-------cchHHHHHHHHHHHhhhccchhHH-HHHHhhhccccc
Q 015396 122 VVIFNTLF--GL-------SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEH 167 (407)
Q Consensus 122 ~~~~~~~~--~~-------~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~ 167 (407)
..+..+.+ +. ...++..++.-.+.+++.|..... +...++ +|+|.
T Consensus 95 ~il~i~~l~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~y 149 (406)
T KOG1479|consen 95 AILFIVTLDLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSEY 149 (406)
T ss_pred HHHHHHHHHHHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhc-CCHHH
Confidence 11111111 11 123455555556677777776664 554444 55544
No 270
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.29 E-value=0.037 Score=38.58 Aligned_cols=71 Identities=21% Similarity=0.171 Sum_probs=58.0
Q ss_pred chhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHHHHHhhhhHHHh
Q 015396 299 MAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAM 376 (407)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (407)
+.+...+|...++ .++|..+.+++-+.+.++..++.+ ...++.++.++++.+..+.+...+......+.+.
T Consensus 9 FayTplLP~M~~~------~~ls~~~ag~lasaNy~GYL~GAl-~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~ 79 (85)
T PF06779_consen 9 FAYTPLLPLMQAD------GGLSLSQAGWLASANYLGYLVGAL-LASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHS 79 (85)
T ss_pred HHHHhHhHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3555567766555 799999999999999999999996 7778888888888999999998888887766654
No 271
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=96.02 E-value=0.21 Score=45.11 Aligned_cols=52 Identities=12% Similarity=0.031 Sum_probs=46.2
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHHHHHhh
Q 015396 318 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTS 370 (407)
Q Consensus 318 ~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 370 (407)
+|++..+++.++........+.+. +.+.+.||+|||+..+..+++..++++.
T Consensus 64 yg~~~~qIa~Lf~~Gf~Ss~i~g~-~~G~laD~~Grk~~cl~~cily~~scl~ 115 (354)
T PF05631_consen 64 YGFSEHQIAILFVAGFASSAIFGT-FVGSLADRYGRKKACLLFCILYSLSCLT 115 (354)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCchHHHHHHHHHHHHHHHH
Confidence 799999999999998888888885 7899999999999999988888888864
No 272
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.00 E-value=0.13 Score=48.71 Aligned_cols=110 Identities=14% Similarity=0.050 Sum_probs=74.6
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhcccccCCh-HHHHHHHH---HHHHHHHHhhc---------cchHHHHHHHHHHHhhhc
Q 015396 83 YAGYVGSSFMFGRALTSVFWGLVADRYGRK-PVIIMGTA---SVVIFNTLFGL---------SVNFWMAVLTRFLLGSLN 149 (407)
Q Consensus 83 ~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr-~~~~~~~~---~~~~~~~~~~~---------~~~~~~l~~~r~l~G~~~ 149 (407)
+.-.....+.++-.+|..+..+.. .-++| +.+.+..+ ++....++|.. -++-+..++..++.|+..
T Consensus 308 ~~~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltn 386 (437)
T TIGR00939 308 YPIICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSN 386 (437)
T ss_pred HHHHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhh
Confidence 356777888888888888665431 11222 12222222 23333333322 245567777789999999
Q ss_pred cchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhh
Q 015396 150 GLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (407)
Q Consensus 150 g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 193 (407)
|..... ..+..+..++++|..+..+...+..+|..+|..++-.+
T Consensus 387 Gy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 387 GYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred hHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998775 88889999999999998888999999999888776443
No 273
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.94 E-value=0.2 Score=47.17 Aligned_cols=145 Identities=15% Similarity=0.262 Sum_probs=92.8
Q ss_pred HHHHHHHHHHhhhhhhchhhhHHHHH---HhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhccc---ccCChHHHH
Q 015396 43 LFSIWIIVLCTALPISSLFPFLYFMI---KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD---RYGRKPVII 116 (407)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~d---r~Grr~~~~ 116 (407)
.+.+....+..++.........|.-. ...+.+.. .+.++..-...++..+++.+.+.+++ |+||++.+.
T Consensus 242 ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~-----~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~ 316 (461)
T KOG3098|consen 242 MLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTT-----YLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVL 316 (461)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcch-----hHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchh
Confidence 34444555555555554444444222 12222221 12444444455556666666777765 578999999
Q ss_pred HHHHHHHHHHHHhhcc------------------chHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHH
Q 015396 117 MGTASVVIFNTLFGLS------------------VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVST 177 (407)
Q Consensus 117 ~~~~~~~~~~~~~~~~------------------~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~ 177 (407)
++.++..+++++.-.. ++.....+.-++.|++-+..... +.++.+.. +++|..+.++...
T Consensus 317 ~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kf 395 (461)
T KOG3098|consen 317 IGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKF 395 (461)
T ss_pred HHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHH
Confidence 9888888877766442 23456666778999998887776 88999988 6788889888888
Q ss_pred HHHHHHHHHHHhhhhh
Q 015396 178 AWGIGLIIGPALGGFL 193 (407)
Q Consensus 178 ~~~~g~~~~~~~~~~l 193 (407)
-..++..++-......
T Consensus 396 yq~~~s~v~~f~~~~~ 411 (461)
T KOG3098|consen 396 YQSVASCVAFFFSPYL 411 (461)
T ss_pred HHHHHHHHHhhhhhhh
Confidence 8777777665554443
No 274
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=95.65 E-value=0.19 Score=43.19 Aligned_cols=108 Identities=15% Similarity=0.095 Sum_probs=55.2
Q ss_pred cchhhhhHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcccccccccCCCChhHHHHHHHHHHHHHHHHhccccCCCCCCC
Q 015396 166 EHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHND 245 (407)
Q Consensus 166 ~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 245 (407)
++|+........+.++|.++.-.. ++... +-+... +..|+..+.+.+++.++-+++...+ +++-+...
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ip--F~~~~--------~~~~~~-~~~W~~I~si~~lL~~IpLIly~if-Gk~fd~~~ 69 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIP--FLISS--------SVVIAL-TNNWQWILSIFILLIFIPLILYIIF-GKNFDIYS 69 (267)
T ss_pred CccceeeeeccccchhhHHHHHhh--HHhcc--------hHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHh-cccccccC
Confidence 566666667777888888765443 22210 000001 3446766677766665555544444 22211111
Q ss_pred CcchhhhhhhhhhhchhhhhhhhcccccccccccccchhHHHHHHHHHHhhc
Q 015396 246 DDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLH 297 (407)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (407)
+++++++ .+.....+....+.+|++..|...+.+......
T Consensus 70 ~~~k~~k------------~~~~~~~~~s~~~~LK~K~tw~w~~~Yg~wLv~ 109 (267)
T PF07672_consen 70 PKEKQEK------------ENSTLSKKPSYKSILKEKETWKWILIYGIWLVV 109 (267)
T ss_pred ccccccc------------ccccccccchHHHHHccchHHHHHHHHHHHhee
Confidence 1100000 000112335778899999999887777765543
No 275
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=95.28 E-value=0.068 Score=53.34 Aligned_cols=78 Identities=12% Similarity=0.216 Sum_probs=57.4
Q ss_pred HHHHHHHHHhhhhhhchhhhHHHHH-HhhcccccccchhhHHHHHHHHHHH-HHHHhhhhhhhcccccCC--hHHHHHHH
Q 015396 44 FSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMF-GRALTSVFWGLVADRYGR--KPVIIMGT 119 (407)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~g~~~~~~~~-~~~~~~~~~G~l~dr~Gr--r~~~~~~~ 119 (407)
+...+..++.......+..++|.+. +++|.++.+ .+++.+...+ +.+++.++.|+++||+++ |+.+.++.
T Consensus 333 ~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~------ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~ 406 (633)
T TIGR00805 333 MLVILAQVIDSLAFNGYITFLPKYLENQYGISSAE------ANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAI 406 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHH------HHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHH
Confidence 3445555666666677777888555 568999998 8988887766 568999999999999984 56666666
Q ss_pred HHHHHHHH
Q 015396 120 ASVVIFNT 127 (407)
Q Consensus 120 ~~~~~~~~ 127 (407)
++..++.+
T Consensus 407 ~~~~~~~~ 414 (633)
T TIGR00805 407 CLSTLSYL 414 (633)
T ss_pred HHHHHHHH
Confidence 66655543
No 276
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=95.28 E-value=1.1 Score=42.48 Aligned_cols=51 Identities=18% Similarity=0.134 Sum_probs=31.8
Q ss_pred hHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHh
Q 015396 134 NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPAL 189 (407)
Q Consensus 134 ~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~ 189 (407)
.++..++.-++.|++.+..... .++.+ .+|++ .+..+..+.+++++++.++
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~----~~~a~~~G~g~aGv~~s~~ 156 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAG-VFPST----YSSAVMSGQGLAGVLTSLA 156 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhcc-cCCHH----HHHHHHhcchhHHHHHHHH
Confidence 4566666677888888877765 55555 56654 3445555666666655544
No 277
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=95.07 E-value=0.036 Score=42.73 Aligned_cols=75 Identities=15% Similarity=0.159 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHHHHHhhhhHHHhhhhhhhH-hhhhh-----hHHHHHHHhhcCCCCC
Q 015396 331 ITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLA-FLLNC-----ASVVKNLLSSSGPGSK 404 (407)
Q Consensus 331 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~p~~~ 404 (407)
...++..++. +..+++.||++||+.+..+.....++.+.............. ...+. .........+.+|++.
T Consensus 6 ~~~~~~~~~~-~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 84 (141)
T TIGR00880 6 GYALGQLIYS-PLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEE 84 (141)
T ss_pred eehhHHHHHH-hhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhh
Confidence 3455666666 478899999999999988888777776665544332222111 11111 1233456778888877
Q ss_pred CC
Q 015396 405 RS 406 (407)
Q Consensus 405 rs 406 (407)
|+
T Consensus 85 ~~ 86 (141)
T TIGR00880 85 RG 86 (141)
T ss_pred hh
Confidence 65
No 278
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=94.63 E-value=0.011 Score=53.27 Aligned_cols=106 Identities=20% Similarity=0.133 Sum_probs=2.2
Q ss_pred HHHHHHHHHHHHhhhhhhhccccc-CChHHHHHHHHHHHH---HHHHhh----------ccchHHHHHHHHHHHhhhccc
Q 015396 86 YVGSSFMFGRALTSVFWGLVADRY-GRKPVIIMGTASVVI---FNTLFG----------LSVNFWMAVLTRFLLGSLNGL 151 (407)
Q Consensus 86 ~~~~~~~~~~~~~~~~~G~l~dr~-Grr~~~~~~~~~~~~---~~~~~~----------~~~~~~~l~~~r~l~G~~~g~ 151 (407)
.....+.++-.+|....++.-=+. .+|++.. ..+.-.+ ..+++. ..+|-+..++.-++.|+..|-
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~-~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGy 264 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWI-LSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGY 264 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHH-HHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccch
Confidence 356678888888888777642111 2444333 3222222 222221 123456677788999999999
Q ss_pred hhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhh
Q 015396 152 LGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGF 192 (407)
Q Consensus 152 ~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 192 (407)
.... ..+..+..++++|..+..+......+|..+|..++-.
T Consensus 265 l~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 265 LSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp --HHHH------------------------------------
T ss_pred hhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8775 8889999999999888888888888888888776533
No 279
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=94.60 E-value=0.0094 Score=57.89 Aligned_cols=147 Identities=14% Similarity=0.251 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhhhhhchhhhHH-HHHHhhcccccccchhhHHHHHHHHHHH-HHHHhhhhhhhcccccC--ChHHHHHHH
Q 015396 44 FSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMF-GRALTSVFWGLVADRYG--RKPVIIMGT 119 (407)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~g~~~~~~~~-~~~~~~~~~G~l~dr~G--rr~~~~~~~ 119 (407)
....++.....+....+..+.| ++..+|+.++++ ++++..+..+ +.++|.+++|++..|+. .|..+.++.
T Consensus 308 ~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~------A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~ 381 (539)
T PF03137_consen 308 MCLILAGVFESFIVSGFATFLPKYLESQFGLSASQ------ASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCI 381 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH------HHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHH
Confidence 3455667777777888888898 455689999988 7777765555 67788999999999885 355554444
Q ss_pred HHHHHHHHHhh---c--c---------c----------------------------------------hHHHHHHHHHHH
Q 015396 120 ASVVIFNTLFG---L--S---------V----------------------------------------NFWMAVLTRFLL 145 (407)
Q Consensus 120 ~~~~~~~~~~~---~--~---------~----------------------------------------~~~~l~~~r~l~ 145 (407)
+...+..+... + + . ++..+++..++.
T Consensus 382 v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~ 461 (539)
T PF03137_consen 382 VVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFIL 461 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHH
Confidence 44443333210 0 0 0 012233333333
Q ss_pred hhhccc-hhHHHHHHhhhccccchhhhhHHHHH-HHHHHHHHHHHhhhhhcCC
Q 015396 146 GSLNGL-LGPIKAYACEIFREEHQALGLSTVST-AWGIGLIIGPALGGFLAQP 196 (407)
Q Consensus 146 G~~~g~-~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~~~~~~~~~l~~~ 196 (407)
-+..+. ..|....+-..+|+++|+.++|+... .-.+|.+=||++-|.+.|.
T Consensus 462 ~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 462 SFFTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp -----------------------------------------------------
T ss_pred HHHHHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 333333 34445566688899999999999854 5567888899999999983
No 280
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=94.02 E-value=1.4 Score=41.08 Aligned_cols=114 Identities=17% Similarity=0.167 Sum_probs=78.3
Q ss_pred chhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHH--HHHHHHHHHHHHhhccchHHHHHHHHHHHhhhccchhH-H
Q 015396 79 DIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII--MGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-I 155 (407)
Q Consensus 79 ~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~-~ 155 (407)
+...|-|.+-++..+.+.++++..|++..++.+-.-+. ...++.+...++++..+|.|..+++.++.+...-...+ +
T Consensus 282 ~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA 361 (412)
T PF01770_consen 282 NESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIA 361 (412)
T ss_pred CCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456899999999999999999999977777644333 33445555667778889999999998888776555444 4
Q ss_pred HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 156 KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 156 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
..-++.....+.-+..+|+..+. +.++-.++...+.+
T Consensus 362 ~~qIA~~l~~e~yaLVFGiNtf~---Al~LQtilT~iV~d 398 (412)
T PF01770_consen 362 SFQIAKNLSEERYALVFGINTFV---ALVLQTILTLIVVD 398 (412)
T ss_pred HHHHHHhccccceeeeeeeHHHH---HHHHHHheEEEEEc
Confidence 66677666777778888777553 33444444433333
No 281
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=93.47 E-value=1.4 Score=40.67 Aligned_cols=108 Identities=19% Similarity=0.100 Sum_probs=75.2
Q ss_pred hHHHHHHHH-HHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHh---------hccchHHHHHHHHHHHhhhccc
Q 015396 82 SYAGYVGSS-FMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF---------GLSVNFWMAVLTRFLLGSLNGL 151 (407)
Q Consensus 82 ~~~g~~~~~-~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~---------~~~~~~~~l~~~r~l~G~~~g~ 151 (407)
++.-++... +.+...+|.+.+.++-++= ||...+.+ ++-.+..-++ ..-.+-+++++.-.+.|+..|-
T Consensus 282 ~y~~~~~~l~fN~~d~vG~~~a~~~~~~~-~r~l~i~v-~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGY 359 (406)
T KOG1479|consen 282 WYALLLVFLSFNVFDLIGSILAALLTWPD-PRKLTIPV-LLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGY 359 (406)
T ss_pred hhHHHHHHHHhHHHHHhhhhhhhcccCCC-CceehHHH-HHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccch
Confidence 345566666 8888899988888776653 44433332 2222222222 2235667788888999999999
Q ss_pred hhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhh
Q 015396 152 LGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGG 191 (407)
Q Consensus 152 ~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 191 (407)
...+ +.+..+..|++++-.+-.+.......|.+.|..++-
T Consensus 360 ltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s~ 400 (406)
T KOG1479|consen 360 LTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLSW 400 (406)
T ss_pred HhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 8886 889999999988888877778888888888776653
No 282
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=92.79 E-value=0.4 Score=42.26 Aligned_cols=108 Identities=15% Similarity=0.019 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhhccchhHHHHHHhhhc
Q 015396 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIF 163 (407)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~~~~~ 163 (407)
.|.+.-+-.+...+..+.+..+.||+---.=..+..++.+.+.++.+++++.++-+.+-.+..++.|..-...--++..+
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss~Y 143 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSSRY 143 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhccC
Confidence 45555566677778888888889987654445556777888888999999999888887777777776555433333344
Q ss_pred cccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 164 REEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 164 ~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
++. ..+.++.+.+.++.+|..-=.++.+
T Consensus 144 ~~~----~i~~WSSGTGgAGliGa~SYa~lT~ 171 (409)
T KOG3880|consen 144 PSI----VIAGWSSGTGGAGLIGASSYAFLTS 171 (409)
T ss_pred CCc----eeccccCCCCcchhhhhhHHHHHhh
Confidence 432 3444555555555666544444443
No 283
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=91.42 E-value=0.13 Score=43.93 Aligned_cols=66 Identities=17% Similarity=0.288 Sum_probs=47.0
Q ss_pred HHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcc---------cccCChHH
Q 015396 44 FSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVA---------DRYGRKPV 114 (407)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~---------dr~Grr~~ 114 (407)
+.-..+.+.+-...+.....+-.+.++.|.++.+ ...+.-+..+.-++..++.|..+ ||+|||+.
T Consensus 20 f~yGvGHmlNDitAScWFTYlllfltqiglsp~~------~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~ 93 (412)
T KOG4830|consen 20 FAYGVGHMLNDITASCWFTYLLLFLTQIGLSPSS------RAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMS 93 (412)
T ss_pred eeechhHHHhhHHHHHHHHHHHHHHHHhcCCcch------hHHHHHhhHHHHHHhcccccccccccccHHHhhhhcceee
Confidence 3344455556666666666777778888999988 77777777777788888877554 58999875
Q ss_pred H
Q 015396 115 I 115 (407)
Q Consensus 115 ~ 115 (407)
.
T Consensus 94 w 94 (412)
T KOG4830|consen 94 W 94 (412)
T ss_pred e
Confidence 3
No 284
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=90.89 E-value=0.69 Score=43.15 Aligned_cols=111 Identities=17% Similarity=0.075 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhhccchhHH-HHHHhhhc
Q 015396 85 GYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIF 163 (407)
Q Consensus 85 g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~ 163 (407)
.|-..++.+...+.+...-+++||+|-|+.+..+...+.++..+.+..++.+....-+...|+-.+....+ +..+++..
T Consensus 335 ~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y~ 414 (498)
T KOG0637|consen 335 CLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGALALYA 414 (498)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHHHHHH
Confidence 35566677778899999999999999776666666667777777788888888888888888543332222 33222221
Q ss_pred ---------------------cc--cchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 164 ---------------------RE--EHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 164 ---------------------~~--~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
.+ ..+|...|+.+....+.+++.....|.+.+
T Consensus 415 ~~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~ 469 (498)
T KOG0637|consen 415 ILGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQ 469 (498)
T ss_pred HhCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhh
Confidence 11 123556667777777888777776677666
No 285
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=87.64 E-value=3.6 Score=35.63 Aligned_cols=56 Identities=20% Similarity=0.125 Sum_probs=48.3
Q ss_pred CccccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHHHHHhhhhH
Q 015396 316 GGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPY 373 (407)
Q Consensus 316 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (407)
+.+|+|..+...+.....++..++ +..|.+.|+++++.++.+|.....++...+..
T Consensus 30 ~~l~~sq~~l~~l~~~~~~G~~~G--~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l 85 (250)
T PF06813_consen 30 SRLGYSQSQLNTLSTAGDIGSYFG--ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWL 85 (250)
T ss_pred HHhCCCHHHHHHHHHHHHHHhhcc--HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 348999999999999999998875 47899999999999999999998888876543
No 286
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=86.31 E-value=3.3 Score=36.73 Aligned_cols=76 Identities=14% Similarity=0.182 Sum_probs=57.6
Q ss_pred HHHHHHHHHHhhccchHHHHHHHHHHHhhhccchhH-HHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhc
Q 015396 119 TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (407)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 194 (407)
..++.+......+.+++|..++.-+..|+-+|...+ ..--+.+-.++++|-.+++....+-++|..++.+++-.+-
T Consensus 326 Nl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalplh 402 (409)
T KOG3880|consen 326 NLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPLH 402 (409)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccch
Confidence 334444455566789999999999999986666555 4666667678899999999999988898888877765543
No 287
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=81.17 E-value=16 Score=32.05 Aligned_cols=98 Identities=17% Similarity=0.130 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcccccCCh--HHHHHHHHHHHHHHHHhhc----cc---hHHHHHHHHHHHhhhccchhH
Q 015396 84 AGYVGSSFMFGRALTSVFWGLVADRYGRK--PVIIMGTASVVIFNTLFGL----SV---NFWMAVLTRFLLGSLNGLLGP 154 (407)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~G~l~dr~Grr--~~~~~~~~~~~~~~~~~~~----~~---~~~~l~~~r~l~G~~~g~~~~ 154 (407)
-|.+.+.++++..+|+-+..++..|-..| ..+.+..+..++...+... ++ ++..=+++..+.-.+.|.+.|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 78999999999999999998888776554 3455544444443332222 22 122223444455566778888
Q ss_pred H-HHHHhhhccccchhhhhHHHHHHHHH
Q 015396 155 I-KAYACEIFREEHQALGLSTVSTAWGI 181 (407)
Q Consensus 155 ~-~~~~~~~~~~~~r~~~~~~~~~~~~~ 181 (407)
. .-+-++..|++.|...+.++..-.++
T Consensus 364 SimkmRsqyIPEearstimNfFRvPLni 391 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVPLNI 391 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheechhhH
Confidence 6 77888999999999998887654443
No 288
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=79.86 E-value=29 Score=30.15 Aligned_cols=102 Identities=20% Similarity=0.202 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcccc-cCChHHHH----HHHHHHHHHHHHhhc-c----chHHHHHHHHHHHhhhccchh
Q 015396 84 AGYVGSSFMFGRALTSVFWGLVADR-YGRKPVII----MGTASVVIFNTLFGL-S----VNFWMAVLTRFLLGSLNGLLG 153 (407)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~G~l~dr-~Grr~~~~----~~~~~~~~~~~~~~~-~----~~~~~l~~~r~l~G~~~g~~~ 153 (407)
......++..|..+|....|+++.. +.||+.+. .+.+.+.++.++... . .+...+++.-++.|++.=...
T Consensus 143 ~~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ 222 (267)
T PF07672_consen 143 IPIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQ 222 (267)
T ss_pred hHHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhh
Confidence 4555666777777888888888764 45555443 233344444333211 1 135667777788887532233
Q ss_pred HHHHHHhhhccccchhhhhHHHHHHHHHHHHH
Q 015396 154 PIKAYACEIFREEHQALGLSTVSTAWGIGLII 185 (407)
Q Consensus 154 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 185 (407)
++.-.+..-++..++-+.--.++..+++|.++
T Consensus 223 ~ViL~lPhEyK~~~pk~ig~~Fg~iWGfGY~~ 254 (267)
T PF07672_consen 223 GVILNLPHEYKGYNPKKIGIQFGLIWGFGYIF 254 (267)
T ss_pred HHHhcChhhhcCCCcceehhHHHHHHHHHHHH
Confidence 33333444344333333333345555555543
No 289
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=78.03 E-value=12 Score=35.78 Aligned_cols=54 Identities=13% Similarity=0.076 Sum_probs=41.9
Q ss_pred HHHHhhhccchhH-HHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 142 RFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 142 r~l~G~~~g~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
-++.-+..-...+ ..++=+.+.+|..-|+.|.+.++..++|+.--..+.-++.+
T Consensus 412 ~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD 466 (544)
T PF13000_consen 412 HVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVD 466 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhh
Confidence 3444455444445 48899999999999999999999999998877767666666
No 290
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=76.11 E-value=4.4 Score=40.68 Aligned_cols=75 Identities=16% Similarity=0.218 Sum_probs=52.1
Q ss_pred HHHHHHHHhhhhhhchhhhHHHHH-HhhcccccccchhhHHHHHHHHHHH-HHHHhhhhhhhcccccC--ChHHHHHHHH
Q 015396 45 SIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMF-GRALTSVFWGLVADRYG--RKPVIIMGTA 120 (407)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~g~~~~~~~~-~~~~~~~~~G~l~dr~G--rr~~~~~~~~ 120 (407)
...++..+.......+..++|-+. ++||.+.+. +..+.+...+ +.++|.++.|++..|+. .|....+.++
T Consensus 396 ~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~------An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~ 469 (735)
T KOG3626|consen 396 LVVLASVIESLAITGYITFLPKYLETQFGISASL------ANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIV 469 (735)
T ss_pred HHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHH------HHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHH
Confidence 455677777778888889999555 579999988 7777755444 45678889999999875 3555544444
Q ss_pred HHHHH
Q 015396 121 SVVIF 125 (407)
Q Consensus 121 ~~~~~ 125 (407)
...+.
T Consensus 470 ~~~l~ 474 (735)
T KOG3626|consen 470 CSVLS 474 (735)
T ss_pred HHHHH
Confidence 44443
No 291
>PRK11469 hypothetical protein; Provisional
Probab=74.64 E-value=47 Score=27.38 Aligned_cols=52 Identities=10% Similarity=-0.012 Sum_probs=32.3
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHHHHHHHhh
Q 015396 319 NYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTS 370 (407)
Q Consensus 319 g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 370 (407)
|.+.........+........+..++.++.++++++.-+.-|.++..++.-.
T Consensus 130 g~~~~~~~~~ig~~s~~~~~~G~~lG~~~g~~~g~~a~~lgG~iLI~iGi~i 181 (188)
T PRK11469 130 QVNIIATALAIGCATLIMSTLGMMVGRFIGSIIGKKAEILGGLVLIGIGVQI 181 (188)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444445555555555555555557777777788877777777776666554
No 292
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=74.43 E-value=39 Score=30.95 Aligned_cols=112 Identities=14% Similarity=0.148 Sum_probs=77.6
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHH--HHHHHHHHHHHHhhccchHHHHHHHHHHHhhhccchhH-HHH
Q 015396 81 GSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII--MGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKA 157 (407)
Q Consensus 81 ~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~-~~~ 157 (407)
+.|-|..-++..+.++++.+..|.+.-++.|..-++ .+.+.-+...++++-+++.|..+++.++.+.--....+ +..
T Consensus 270 ~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~ 349 (433)
T KOG3810|consen 270 NVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATF 349 (433)
T ss_pred hhhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHH
Confidence 455777888888888999999999998887764443 34444444556667788899988888777765555444 466
Q ss_pred HHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 158 YACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 158 ~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
-+++....|.-|..+|+.... +.++-.++.-.+.+
T Consensus 350 ~iA~nL~~e~~gLvFGiNTFv---Al~lQsilT~iVvd 384 (433)
T KOG3810|consen 350 QIARNLSSELFGLVFGINTFV---ALILQSILTLIVVD 384 (433)
T ss_pred HHHHhhhhhhheeeeehHHHH---HHHHHHhheEEEEc
Confidence 677777777778888876543 44555555555555
No 293
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=70.43 E-value=80 Score=31.31 Aligned_cols=64 Identities=9% Similarity=0.051 Sum_probs=54.7
Q ss_pred hHHHHHHHHHHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcCCC
Q 015396 134 NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (407)
Q Consensus 134 ~~~~l~~~r~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 197 (407)
|.++++-=.++.|++.....+. .-+.-+-+|++-|+.+.+++....++|..+...+.......+
T Consensus 457 Si~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~~~t 521 (571)
T KOG1237|consen 457 SILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVGNYLSSVLVSLVQFST 521 (571)
T ss_pred eHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4677777789999999887775 778888899999999999999999999999999887776533
No 294
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=67.43 E-value=1.2e+02 Score=29.20 Aligned_cols=147 Identities=14% Similarity=0.082 Sum_probs=77.8
Q ss_pred HHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHH-
Q 015396 46 IWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI- 124 (407)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~- 124 (407)
++...++.+...+.+........++...++. +...+.|.+.....+...+.+++.+++.+|+|-+...++.=+...+
T Consensus 269 ia~~vi~y~~~~nlve~~~k~~v~~~~p~~~--~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~lit 346 (472)
T TIGR00769 269 LALLVIAYGISINLVEVTWKSKLKAQYPSPN--EYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVMLLT 346 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 3334444444445554444444444443332 3445577777777777777888889999999999776665444433
Q ss_pred --HHHHhhccch------------H--HHHHHH---HHHHhhh-ccchhHHHHHHhhhccccchhhhhHHH-HHHHHHHH
Q 015396 125 --FNTLFGLSVN------------F--WMAVLT---RFLLGSL-NGLLGPIKAYACEIFREEHQALGLSTV-STAWGIGL 183 (407)
Q Consensus 125 --~~~~~~~~~~------------~--~~l~~~---r~l~G~~-~g~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~~g~ 183 (407)
+.+.+.+..+ + ...+++ ..+...+ .+...|+--++---.+++.|.++=+.. ..+..+|-
T Consensus 347 ~~~Ff~~~~f~~~~~~~~~~l~~~pl~l~v~~g~~~~v~~k~~kYsl~dp~kEmly~pld~e~K~K~Ka~iD~v~~r~Gk 426 (472)
T TIGR00769 347 GVAFFSLIFFGGPAAPLVAKLGMTPLLLAVYVGAIQNILSKSTKYSLFDATKEMAYIPLDEEQKVKGKAAIDVVAARLGK 426 (472)
T ss_pred HHHHHHHHHhcccchhhhhhhccChHHHHHHHHHHHHHHHHHhhhccccHHHHHhcccCCHHHHHHhHhhhhhhhhhhhh
Confidence 2221111111 1 011111 1111111 233444422333335678888887777 56666777
Q ss_pred HHHHHhhhhhc
Q 015396 184 IIGPALGGFLA 194 (407)
Q Consensus 184 ~~~~~~~~~l~ 194 (407)
..|..+...+.
T Consensus 427 s~gs~i~~~l~ 437 (472)
T TIGR00769 427 SGGALIQQGLL 437 (472)
T ss_pred HHHHHHHHHHH
Confidence 77777665543
No 295
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=66.46 E-value=47 Score=30.77 Aligned_cols=152 Identities=9% Similarity=-0.033 Sum_probs=83.6
Q ss_pred chHHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHH
Q 015396 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (407)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~ 118 (407)
..+..+.+.+++++...+.-+.......++.+++-+.-. +.+.-..+-.....+..++.|...|+..|+|++...
T Consensus 25 ls~~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~-----lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~ 99 (503)
T KOG2601|consen 25 LSSTVIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLL-----LVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTW 99 (503)
T ss_pred ccceeehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceeh-----hHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHH
Confidence 334456677788888887777777777777776654322 022222233344567778889999999999998766
Q ss_pred HHHHHHHH------HHhhcc------chHHHHHHHHHHHhhhccc--hhH-HHHH--Hhhhc----cccchhhhh---HH
Q 015396 119 TASVVIFN------TLFGLS------VNFWMAVLTRFLLGSLNGL--LGP-IKAY--ACEIF----REEHQALGL---ST 174 (407)
Q Consensus 119 ~~~~~~~~------~~~~~~------~~~~~l~~~r~l~G~~~g~--~~~-~~~~--~~~~~----~~~~r~~~~---~~ 174 (407)
+.+--++. ++..+. .+...+..+.++.-...+. ... +.++ -.||. ..+.+.... +.
T Consensus 100 L~lqNlSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnat 179 (503)
T KOG2601|consen 100 LLLQNLSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNAT 179 (503)
T ss_pred HhhccHHHHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchh
Confidence 55433322 222222 2344444433333221111 111 2222 23443 233444433 44
Q ss_pred HHHHHHHHHHHHHHhhhhhcC
Q 015396 175 VSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 175 ~~~~~~~g~~~~~~~~~~l~~ 195 (407)
....--.-..++|.+.|.+.+
T Consensus 180 ir~iDq~tn~Lapv~tg~Iit 200 (503)
T KOG2601|consen 180 IRGIDQSTNLLAPVITGLIIT 200 (503)
T ss_pred hhhhhhhhhchhhhhhcccce
Confidence 444555667889999998887
No 296
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=66.19 E-value=33 Score=24.83 Aligned_cols=27 Identities=7% Similarity=0.063 Sum_probs=17.3
Q ss_pred hHHHHHHHHhchhHHHHHHHHHHHHHH
Q 015396 342 SLYPFLERILGPIMVARIAGVLTIPLL 368 (407)
Q Consensus 342 ~~~~~l~~~~~~~~~~~~~~~~~~~~~ 368 (407)
+++.|++++++......+.+++.+++.
T Consensus 61 ~lG~WLD~~~~t~~~~tl~~lllGv~~ 87 (100)
T TIGR02230 61 AVGIWLDRHYPSPFSWTLTMLIVGVVI 87 (100)
T ss_pred HHHHHHHhhcCCCcHHHHHHHHHHHHH
Confidence 578899888887655555444444433
No 297
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=65.86 E-value=1.9 Score=38.81 Aligned_cols=41 Identities=22% Similarity=0.193 Sum_probs=0.0
Q ss_pred HHHhhhccchhHH-HHHHhhhccccchhhhhHHHHHHHHHHHHHHHH
Q 015396 143 FLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPA 188 (407)
Q Consensus 143 ~l~G~~~g~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 188 (407)
++.|++.+..... ..+.+. +|++. +.....+.++++++..+
T Consensus 5 ~~~~~~~~~~q~s~~glas~-~p~~y----~~a~~~Gq~~aGv~~s~ 46 (309)
T PF01733_consen 5 ALIGFANAVLQSSLFGLASL-FPPKY----TQAVMIGQGLAGVIVSL 46 (309)
T ss_dssp -----------------------------------------------
T ss_pred EEEHhhhHHHhccHHHHHhc-CCHHH----HHHHHhhccHHHHHHHH
Confidence 4556666666664 555554 66544 33344455555555443
No 298
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=64.76 E-value=16 Score=26.55 Aligned_cols=24 Identities=21% Similarity=0.241 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHhhhhhhhccccc
Q 015396 86 YVGSSFMFGRALTSVFWGLVADRY 109 (407)
Q Consensus 86 ~~~~~~~~~~~~~~~~~G~l~dr~ 109 (407)
.=.+.-+++..+.....||+.|||
T Consensus 46 ~klssefIsGilVGa~iG~llD~~ 69 (116)
T COG5336 46 FKLSSEFISGILVGAGIGWLLDKF 69 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 334555666777778889999997
No 299
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=62.97 E-value=29 Score=35.00 Aligned_cols=66 Identities=11% Similarity=0.122 Sum_probs=45.2
Q ss_pred hhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHH-HhchhHHHHHHHHHHHHHHhhhhH
Q 015396 302 SEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLER-ILGPIMVARIAGVLTIPLLTSYPY 373 (407)
Q Consensus 302 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~ 373 (407)
...+..|+... +|++...+..+........-+... +++++.| ++|+++.+.++.++..++..++.+
T Consensus 7 ~aiLvlYl~~~-----lg~~~~~A~~i~~~f~~l~yl~pi-lGg~iAD~~lG~~~tIl~~~ii~~lG~~llai 73 (654)
T TIGR00926 7 RTILVLYFLNF-----LGFSESTSTVLFHTFTYLCYLTPL-IGAIIADGWLGKFKTILYLSIVYVVGHALLSF 73 (654)
T ss_pred HHHHHHHHHHH-----cCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh
Confidence 33444554443 677777777766666655555554 6666666 589999999998888888776654
No 300
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=62.22 E-value=78 Score=25.15 Aligned_cols=36 Identities=17% Similarity=0.187 Sum_probs=26.3
Q ss_pred HHHHHHHhHHHHHHHHhchhHHHHHHHHHHHHHHhhh
Q 015396 335 SLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSY 371 (407)
Q Consensus 335 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 371 (407)
...+.. ++.+.+.+++|.|+.++++.+...+-...+
T Consensus 49 ~~~~s~-l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~ 84 (156)
T PF05978_consen 49 SFAISC-LFAPSIVNKLGPKWSMILGSLGYAIYIASF 84 (156)
T ss_pred HHHHHH-HhHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 334444 356778899999999999988887666554
No 301
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=61.28 E-value=23 Score=27.85 Aligned_cols=50 Identities=16% Similarity=0.162 Sum_probs=34.0
Q ss_pred hHHHHHHHHHHHhhhccchhHHHHHHhhhccccchhhhhHHHHHHHHHHHHH
Q 015396 134 NFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLII 185 (407)
Q Consensus 134 ~~~~l~~~r~l~G~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 185 (407)
++..+++...+.|+ |.....|.+++-..++++.|..+|+-.+-.+++-+.
T Consensus 96 ~~~~~~~S~~~Fg~--gllGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 96 PWAVLLVSLVFFGL--GLLGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred chHHHHHHHHHHHH--HHHhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 34444444444333 344555777888889999999999988888877654
No 302
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=57.78 E-value=1.3e+02 Score=26.22 Aligned_cols=19 Identities=5% Similarity=-0.085 Sum_probs=8.4
Q ss_pred HHHHHHHHHHHHHHhcccc
Q 015396 220 LCISLFAFGVTIAAFWLPE 238 (407)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~e 238 (407)
++..++.++....+.+++.
T Consensus 119 ~~G~~l~~~~~~~f~fik~ 137 (254)
T PF07857_consen 119 YIGVALVLVSGIIFSFIKS 137 (254)
T ss_pred HHHHHHHHHHHHheeeecC
Confidence 3344444444444444443
No 303
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=56.09 E-value=84 Score=29.87 Aligned_cols=71 Identities=14% Similarity=0.199 Sum_probs=46.1
Q ss_pred CCchHHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHH
Q 015396 37 GLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVI 115 (407)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~ 115 (407)
+.+..+...+.+-.++..++.....|. ....++|++.++ ...+.+.-.+...++.++--....+.|-|-..
T Consensus 12 ~~~~~~~~~lglQH~lamfg~~V~VPl--ivg~a~~l~~~~------~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~ 82 (451)
T COG2233 12 RLPLGKLLLLGLQHLLAMFGATVLVPL--LVGLALGLSAED------TAYLISADLLASGIGTLLQLLGTGPGGSGLPS 82 (451)
T ss_pred cCChHHHHHHHHHHHHHHHhcchHhhH--HhccCCCCCHHH------HHHHHHHHHHHHHHHHHHHHhhccCcccCCCe
Confidence 344555666666666666665444443 234678888888 88888888888888888776644445544433
No 304
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=53.47 E-value=1.3e+02 Score=25.13 Aligned_cols=48 Identities=13% Similarity=0.106 Sum_probs=22.8
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhHHHHHHHH--hchhHHHHHHHHHHHHH
Q 015396 319 NYSTQMVGEVLAITGFSLLVFQLSLYPFLERI--LGPIMVARIAGVLTIPL 367 (407)
Q Consensus 319 g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~ 367 (407)
|.+.........+..+.....+..++.++.++ .+++. +.-|.++..++
T Consensus 153 g~~~~~~~~~igivs~i~~~~G~~lG~~~~~~~~~g~~a-~igGliLI~iG 202 (206)
T TIGR02840 153 GLNPLATSILVAVMSFIFVSLGLFLGKKISKKSIIGKFS-FLSGILLILLG 202 (206)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchH-HHHHHHHHHHH
Confidence 44444444444444444444444455555554 35544 44455544443
No 305
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=52.52 E-value=1.4e+02 Score=24.97 Aligned_cols=23 Identities=22% Similarity=0.288 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcC
Q 015396 173 STVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 173 ~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
.......-++..+|..+++++.+
T Consensus 165 ~~~~~~~i~~f~~Ga~~ga~l~~ 187 (209)
T PF06912_consen 165 ALRYLLIILSFFIGAILGALLYR 187 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445555566666666666665
No 306
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=51.15 E-value=2.5e+02 Score=27.55 Aligned_cols=28 Identities=7% Similarity=0.117 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHhchh
Q 015396 326 GEVLAITGFSLLVFQLSLYPFLERILGPI 354 (407)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 354 (407)
........+.+.+++. +++++-+.++.+
T Consensus 300 t~~i~~y~~~~~iaGy-~S~~~yk~~~g~ 327 (521)
T PF02990_consen 300 TAAIILYALTSFIAGY-VSARLYKSFGGK 327 (521)
T ss_pred HHHHHHHHHHhhHHHH-HHHHHHHHcCCC
Confidence 3444455556666664 667776666543
No 307
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=50.37 E-value=85 Score=27.20 Aligned_cols=27 Identities=22% Similarity=0.146 Sum_probs=19.1
Q ss_pred HHHHHHHHhchhHHHHHHHHHHHHHHh
Q 015396 343 LYPFLERILGPIMVARIAGVLTIPLLT 369 (407)
Q Consensus 343 ~~~~l~~~~~~~~~~~~~~~~~~~~~~ 369 (407)
.+..++.|+..|++..++.++..+.-+
T Consensus 259 gGk~lAskIS~rtVt~~ggi~Fi~Fgl 285 (294)
T KOG2881|consen 259 GGKYLASKISVRTVTLIGGILFIIFGL 285 (294)
T ss_pred hhHHHhhhheeEEEEEecchhHHHHHH
Confidence 566778889888887777666555433
No 308
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=49.74 E-value=44 Score=24.39 Aligned_cols=48 Identities=17% Similarity=0.179 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhc
Q 015396 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL 131 (407)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~ 131 (407)
.|-+.++|.-.+++.++.+++..|+.-+-+.=.++..++.++..+..+
T Consensus 56 fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 56 FGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred chhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEe
Confidence 788889999999999999999999998877777777777666655443
No 309
>COG2836 Uncharacterized conserved protein [Function unknown]
Probab=49.13 E-value=1.7e+02 Score=24.90 Aligned_cols=43 Identities=21% Similarity=0.143 Sum_probs=25.9
Q ss_pred chhhHHHHHHHHHHHHHHHHHhHHHHHHHHh---chhHHHHHHHHHH
Q 015396 321 STQMVGEVLAITGFSLLVFQLSLYPFLERIL---GPIMVARIAGVLT 364 (407)
Q Consensus 321 s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~ 364 (407)
|+.+-+..+..++++.....+ ..++.++++ .|++..+.+..+.
T Consensus 162 S~~~Gal~mlaFGlGTlP~ll-~~G~~s~~~s~~~r~~~~rl~~gl~ 207 (232)
T COG2836 162 SAFEGALVMLAFGLGTLPNLL-AMGIFSSKLSKSSRKRLNRLSGGLM 207 (232)
T ss_pred CHHHHHHHHHHHhhcccHHHH-HHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 566667777777877777653 555555554 3555555544443
No 310
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=47.88 E-value=2e+02 Score=25.55 Aligned_cols=57 Identities=25% Similarity=0.337 Sum_probs=37.1
Q ss_pred HHHHHHHHhhhccchhHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhc
Q 015396 138 AVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (407)
Q Consensus 138 l~~~r~l~G~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 194 (407)
.-..|.+.|+-.-.+.|.++++.-.||++++--..--...+.+++.++-|++|-.+.
T Consensus 22 ~~~lr~~~g~~~vlf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l~ 78 (287)
T PF07760_consen 22 IPPLRVILGFPFVLFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLLN 78 (287)
T ss_pred hhHHHHHHHHHHHHHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456788888776667778999999999655443333334455555566666665554
No 311
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=47.84 E-value=1.5e+02 Score=27.76 Aligned_cols=54 Identities=11% Similarity=0.033 Sum_probs=42.6
Q ss_pred HHHHhhh-ccchhHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 142 RFLLGSL-NGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 142 r~l~G~~-~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
..+.+.. ...+...++..+++.||...|+.|.+.+.-.++|+-.-..+..++.+
T Consensus 376 y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D 430 (510)
T KOG3574|consen 376 YAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLAD 430 (510)
T ss_pred HHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcc
Confidence 3444443 33344458899999999999999999999999999888888888887
No 312
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=47.63 E-value=1.2e+02 Score=28.06 Aligned_cols=87 Identities=9% Similarity=0.113 Sum_probs=60.9
Q ss_pred HHHHHHHhhhhhhchhhhHHHH-HHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHH
Q 015396 46 IWIIVLCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (407)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~ 124 (407)
+.++..+...+.+.+-|-++.+ .++++-+. +.+......+......+|..++..+.+++-|++|....+.++.+...+
T Consensus 36 ~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~-~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~ 114 (372)
T PF00854_consen 36 FYIGLALIAVGTGGIKPNISPFGADQYDEDD-DSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLL 114 (372)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHCSSTTT-TTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccccccccHHHHHHHHhcccc-hhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHH
Confidence 4444445566777777777644 45555432 333444467888888899999999999999999999988888888887
Q ss_pred HHHHhhccc
Q 015396 125 FNTLFGLSV 133 (407)
Q Consensus 125 ~~~~~~~~~ 133 (407)
+.+.+....
T Consensus 115 ~~~~f~~~~ 123 (372)
T PF00854_consen 115 ALIVFLSGR 123 (372)
T ss_dssp HHHHHHCCC
T ss_pred HHHHHHhCC
Confidence 777665543
No 313
>COG3559 TnrB3 Putative exporter of polyketide antibiotics [Cell envelope biogenesis, outer membrane]
Probab=46.60 E-value=2.6e+02 Score=26.44 Aligned_cols=25 Identities=0% Similarity=-0.156 Sum_probs=15.1
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhH
Q 015396 319 NYSTQMVGEVLAITGFSLLVFQLSL 343 (407)
Q Consensus 319 g~s~~~~~~~~~~~~~~~~~~~~~~ 343 (407)
+....+.+++...+.+..++...+.
T Consensus 340 ~ag~le~~Flv~lfsIisil~a~~~ 364 (536)
T COG3559 340 GAGALEQAFLVLLFSIISILAAAFA 364 (536)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445556677777777766665433
No 314
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=43.45 E-value=1.4e+02 Score=28.30 Aligned_cols=30 Identities=33% Similarity=0.331 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHhhhhhhhccc----ccCChH
Q 015396 84 AGYVGSSFMFGRALTSVFWGLVAD----RYGRKP 113 (407)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~G~l~d----r~Grr~ 113 (407)
-|-+.+...+.+++.+++.|+.+. |.|-|+
T Consensus 325 rGal~saaI~vYAlTs~i~GY~~gs~Y~r~gG~~ 358 (593)
T KOG1277|consen 325 RGALLSAAIVVYALTSPINGYVSGSFYARLGGRR 358 (593)
T ss_pred chHHHHHHHHHHHhcccccccccceeeehhccHH
Confidence 566677777777788887777665 555443
No 315
>PRK02237 hypothetical protein; Provisional
Probab=43.27 E-value=69 Score=23.48 Aligned_cols=48 Identities=17% Similarity=0.083 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhc
Q 015396 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL 131 (407)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~ 131 (407)
.|-+.++|.-.+++.++.+++..|+.-+-+.=.++..++.++..+..+
T Consensus 58 ~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 58 FGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred hhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 788888999999999999999999988777666676666666544433
No 316
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=42.70 E-value=2.2e+02 Score=27.00 Aligned_cols=122 Identities=11% Similarity=0.055 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHH
Q 015396 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (407)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~ 120 (407)
++.+.+.+-..+..+......|.+ +.... .++++ ...+.+...+...++.++-+....+.-|-+.......
T Consensus 5 ~~~~~lglQh~l~~~~~~i~~p~i--v~~~~-l~~~~------~~~li~at~~~sgi~Tllq~~~~~~~~~lp~~~G~sf 75 (415)
T TIGR00801 5 LQTLVLGLQHLLAMFGGTVLVPLL--VGLAP-LSAEQ------TQYLVSISLLTSGIGTLLQLFRTGGQIGLPSYLGSSF 75 (415)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--Hhccc-CCHHH------HHHHHHHHHHHHHHHHHHHHhhhcCceeeeeeecCcH
Confidence 344444444444444433333332 23444 67777 7888888888889999998887765422222222222
Q ss_pred HHHHHHHHhhccchHHHHHHHHHHHhhhccchhHH-----HHHHhhhccccchhhh
Q 015396 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-----KAYACEIFREEHQALG 171 (407)
Q Consensus 121 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-----~~~~~~~~~~~~r~~~ 171 (407)
......+......++.....+-++.|+........ ...+.+.+|+.-.+..
T Consensus 76 a~i~~~~~~~~~~~~~~~~g~~i~~gl~~~ll~~~~~~~~~~~i~~~~Pp~v~g~i 131 (415)
T TIGR00801 76 AFVSPMIAIGSGLGIPAIMGALIATGLVYTLLSLLIKKLGPRWLMKLFPPVVTGPV 131 (415)
T ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchhHHHh
Confidence 22222222222234444444445555544333321 2345777888776654
No 317
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=41.22 E-value=66 Score=26.38 Aligned_cols=24 Identities=17% Similarity=0.517 Sum_probs=20.2
Q ss_pred HHHHHHHHHHhhhhhhhcccccCC
Q 015396 88 GSSFMFGRALTSVFWGLVADRYGR 111 (407)
Q Consensus 88 ~~~~~~~~~~~~~~~G~l~dr~Gr 111 (407)
+..|.+++.+.+.+.|++.||..+
T Consensus 88 TgGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 88 TGGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhc
Confidence 445778888999999999999885
No 318
>PF11085 YqhR: Conserved membrane protein YqhR; InterPro: IPR024563 This family of proteins is conserved in the Bacillaceae family of the Firmicutes. Their function is not known.
Probab=40.45 E-value=2e+02 Score=23.25 Aligned_cols=67 Identities=21% Similarity=0.220 Sum_probs=33.6
Q ss_pred hhHHhhhccCCCccCccccchhhHHHHHHH--HHHHHHHHHHhHHHHHHHH-hchhHHHHHHHHHHHHHHhhh
Q 015396 302 SEIFSLWANSPKKLGGLNYSTQMVGEVLAI--TGFSLLVFQLSLYPFLERI-LGPIMVARIAGVLTIPLLTSY 371 (407)
Q Consensus 302 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~ 371 (407)
....|.++..|...++ +.....|.+.++ .++..+++++ +...+-+| .+...-+..|.+..++....+
T Consensus 47 T~v~P~~ll~Pf~~g~--wk~t~~G~~igi~~~gv~Si~aAl-lY~~~l~k~~g~W~Gi~YG~~~W~ivF~~l 116 (173)
T PF11085_consen 47 TEVGPNFLLEPFALGD--WKNTWLGNLIGIVFIGVFSIVAAL-LYYALLKKFKGPWPGILYGLAWWAIVFFVL 116 (173)
T ss_pred cccccChhhhhhhccc--hhhhhHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcccchHHHHHHHHHHHHHHHh
Confidence 3345555555554432 334444544433 3444455554 44444444 455566677777666555544
No 319
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=38.76 E-value=3.2e+02 Score=25.29 Aligned_cols=84 Identities=12% Similarity=0.053 Sum_probs=53.9
Q ss_pred cccccccchhhHHHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHH----HHHHh-hc----cchHHHHHHHH
Q 015396 72 QIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI----FNTLF-GL----SVNFWMAVLTR 142 (407)
Q Consensus 72 ~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~----~~~~~-~~----~~~~~~l~~~r 142 (407)
|-.--+ .+++.+.|..+..+|+...-++.|.--.-+.+..-.++..+ ..+++ .+ .++-+.++++-
T Consensus 39 G~~Ilq------~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt 112 (508)
T COG4262 39 GGGILQ------TSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALT 112 (508)
T ss_pred CCceee------hHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHH
Confidence 445556 88999999999999999998888754333222222222221 11222 22 34667888888
Q ss_pred HHHhhhccchhHH-HHHHhh
Q 015396 143 FLLGSLNGLLGPI-KAYACE 161 (407)
Q Consensus 143 ~l~G~~~g~~~~~-~~~~~~ 161 (407)
++.|.-.|.-.|. +.++..
T Consensus 113 ~vIG~LVG~EiPL~mrml~~ 132 (508)
T COG4262 113 AVIGVLVGAEIPLLMRMLQR 132 (508)
T ss_pred HHHHHHHhcchHHHHHHHHH
Confidence 8999888887775 666655
No 320
>COG4769 Predicted membrane protein [Function unknown]
Probab=38.02 E-value=26 Score=27.72 Aligned_cols=53 Identities=17% Similarity=0.308 Sum_probs=36.0
Q ss_pred HHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhh
Q 015396 90 SFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSL 148 (407)
Q Consensus 90 ~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 148 (407)
++.+...+.+...-++..++|+|.+-+++.-. .-++.+|..++++.+++.|-.
T Consensus 81 l~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~------mGaF~hNl~QLivas~Lv~~~ 133 (181)
T COG4769 81 LYSFAGAILSTLFMYFLYQFGPKYLSLLGISV------MGAFTHNLGQLIVASFLVFTT 133 (181)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCceEeeeehhh------HHHHHHhHHHHHHHHHHHhcc
Confidence 34445566677777888899988874443322 235678889999888887654
No 321
>COG2119 Predicted membrane protein [Function unknown]
Probab=35.55 E-value=2.5e+02 Score=23.04 Aligned_cols=38 Identities=13% Similarity=0.288 Sum_probs=29.5
Q ss_pred HHHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHH
Q 015396 90 SFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNT 127 (407)
Q Consensus 90 ~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~ 127 (407)
...++..++...+.++++|+..|.+-..+.+++.+..+
T Consensus 142 g~~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~fal 179 (190)
T COG2119 142 GMILASVLAVLLGKLIAGKLPERLLRFIAALLFLIFAL 179 (190)
T ss_pred HHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHH
Confidence 34566778888899999999999998887777665543
No 322
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=34.83 E-value=4e+02 Score=25.17 Aligned_cols=30 Identities=13% Similarity=0.124 Sum_probs=18.1
Q ss_pred hhccccchhhhhHHHHHHHHHHHHHHHHhh
Q 015396 161 EIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (407)
Q Consensus 161 ~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 190 (407)
|..+-++---+.++...+...|.++.++.+
T Consensus 315 ~~~~iDD~~~~~~vHg~~Gi~G~i~~glf~ 344 (404)
T TIGR03644 315 DKLKIDDPVGAISVHGVAGIWGTLVVPITN 344 (404)
T ss_pred HhCCCCCCcCchHhhhHHHHHHHHHHHHhc
Confidence 555555555567777666666666555543
No 323
>TIGR00267 conserved hypothetical protein TIGR00267. This family is represented in three of the first four completed archaeal genomes, with two members in A. fulgidus.
Probab=34.28 E-value=1.6e+02 Score=23.83 Aligned_cols=20 Identities=20% Similarity=0.468 Sum_probs=10.8
Q ss_pred HhhhhhhhcccccCChHHHH
Q 015396 97 LTSVFWGLVADRYGRKPVII 116 (407)
Q Consensus 97 ~~~~~~G~l~dr~Grr~~~~ 116 (407)
+.-.+.|++.-|++.++...
T Consensus 128 ~~L~ilG~~~a~~s~~~~~~ 147 (169)
T TIGR00267 128 IALLVLGVYLGRISRENILI 147 (169)
T ss_pred HHHHHHHHHHHHHcCCcHHH
Confidence 34445666666666555443
No 324
>PRK11469 hypothetical protein; Provisional
Probab=34.26 E-value=2.3e+02 Score=23.37 Aligned_cols=76 Identities=16% Similarity=0.082 Sum_probs=40.3
Q ss_pred chHHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHHHHHHHHHH-HhhhhhhhcccccCChHHHHH
Q 015396 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRA-LTSVFWGLVADRYGRKPVIIM 117 (407)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~-~~~~~~G~l~dr~Grr~~~~~ 117 (407)
..+..+.+.++.-++.+..+.-.... |.+.-. ......+..+... .+.....++.+++|+|.-++-
T Consensus 104 ~~~~~l~LaiAtSiDAlavGi~~~~~-------g~~~~~------~~~~ig~~s~~~~~~G~~lG~~~g~~~g~~a~~lg 170 (188)
T PRK11469 104 GFWLLVTTAIATSLDAMAVGVGLAFL-------QVNIIA------TALAIGCATLIMSTLGMMVGRFIGSIIGKKAEILG 170 (188)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHh-------hhhHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666667777766666554433221 222222 2222333222222 333344456667888877777
Q ss_pred HHHHHHHHHH
Q 015396 118 GTASVVIFNT 127 (407)
Q Consensus 118 ~~~~~~~~~~ 127 (407)
+.++..++.-
T Consensus 171 G~iLI~iGi~ 180 (188)
T PRK11469 171 GLVLIGIGVQ 180 (188)
T ss_pred HHHHHHHHHH
Confidence 7777777654
No 325
>PF06341 DUF1056: Protein of unknown function (DUF1056); InterPro: IPR009406 This entry is represented by Bacteriophage bIL286, Orf42. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several putative head-tail joining bacteriophage proteins.
Probab=33.03 E-value=88 Score=20.37 Aligned_cols=36 Identities=8% Similarity=-0.000 Sum_probs=21.7
Q ss_pred hHHHHHHHHHHHhhhccchhHHHHHHhhhccccchh
Q 015396 134 NFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQA 169 (407)
Q Consensus 134 ~~~~l~~~r~l~G~~~g~~~~~~~~~~~~~~~~~r~ 169 (407)
++..+.......++..+.......+++|..+++++|
T Consensus 27 ~it~F~~n~~~g~i~i~I~l~l~G~isE~i~~~Kgg 62 (63)
T PF06341_consen 27 NITAFLINQIAGLISIGITLFLAGLISEFISKQKGG 62 (63)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 444444444455555556566678888888764443
No 326
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=32.84 E-value=2e+02 Score=24.66 Aligned_cols=40 Identities=20% Similarity=0.038 Sum_probs=31.0
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHHHHHHHhchhHHHHHHHHH
Q 015396 323 QMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVL 363 (407)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 363 (407)
...+.......+...++. +..+.+.||.|+|+.+..+...
T Consensus 39 ~~~~~~~~~~~~~~~~~~-~~~g~l~d~~g~~~~~~~~~~~ 78 (338)
T COG0477 39 LLYGLLLSAFFLGYAIGS-LLAGPLGDRYGRRKVLIIGLLL 78 (338)
T ss_pred HHHHHHHHHHHHHHHHHh-hhhhhccccccchHHHHHHHHH
Confidence 467788888888888877 4889999998988777766654
No 327
>PRK03612 spermidine synthase; Provisional
Probab=32.38 E-value=5e+02 Score=25.53 Aligned_cols=55 Identities=22% Similarity=0.231 Sum_probs=31.8
Q ss_pred HHHHHHhhccchhhhHHhhhccCCCccCccccchhhHHHHHHHHHHHHHHHHHhHHHHHHH
Q 015396 289 IVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLER 349 (407)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 349 (407)
+..++..++...+.....-.+... +|-+....+.+.+.+-.+..+|+. +++++.+
T Consensus 21 ~~~f~sg~~~L~yEv~~~r~l~~~-----~G~s~~~~~~ii~~fl~glalGs~-l~~~~~~ 75 (521)
T PRK03612 21 AAVFVCAACGLVYELLLGTLASYL-----LGDSVTQFSTVIGLMLFAMGVGAL-LSKYLLR 75 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-----hCchHHHHHHHHHHHHHHHHHHHH-HHHhhhh
Confidence 334444445455554444443333 566777777777777777777764 5555543
No 328
>COG1971 Predicted membrane protein [Function unknown]
Probab=32.26 E-value=2.9e+02 Score=22.80 Aligned_cols=29 Identities=14% Similarity=-0.112 Sum_probs=18.9
Q ss_pred hHHHHHHHHhchhHHHHHHHHHHHHHHhh
Q 015396 342 SLYPFLERILGPIMVARIAGVLTIPLLTS 370 (407)
Q Consensus 342 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 370 (407)
.++.++.+.+|.+.-+..+.++..++.-.
T Consensus 155 ~IG~~~g~~~g~~ae~lgGiiLI~~G~~i 183 (190)
T COG1971 155 IIGRKLGKFLGKYAEILGGIILIGIGVKI 183 (190)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 36666666677777777777666665543
No 329
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=31.87 E-value=1.2e+02 Score=23.82 Aligned_cols=26 Identities=27% Similarity=0.578 Sum_probs=21.1
Q ss_pred HHHHHHHHHHhhhhhhhcccccCChH
Q 015396 88 GSSFMFGRALTSVFWGLVADRYGRKP 113 (407)
Q Consensus 88 ~~~~~~~~~~~~~~~G~l~dr~Grr~ 113 (407)
+.-|.++..+...+.|++.+|..+++
T Consensus 59 TgGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 59 TGGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred CChHHHHHHHHHHHHHHHHHhccccc
Confidence 34577788888999999999988764
No 330
>PRK10263 DNA translocase FtsK; Provisional
Probab=31.17 E-value=1.9e+02 Score=31.70 Aligned_cols=10 Identities=40% Similarity=0.614 Sum_probs=3.7
Q ss_pred HHHHHHHhhh
Q 015396 182 GLIIGPALGG 191 (407)
Q Consensus 182 g~~~~~~~~~ 191 (407)
|+++|..++.
T Consensus 143 GGIIG~lLs~ 152 (1355)
T PRK10263 143 GGVIGSLLST 152 (1355)
T ss_pred cchHHHHHHH
Confidence 3333333333
No 331
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=30.01 E-value=1.6e+02 Score=22.89 Aligned_cols=30 Identities=23% Similarity=-0.056 Sum_probs=21.3
Q ss_pred HHHhhhccccchhhhhHHHHHHHHHHHHHH
Q 015396 157 AYACEIFREEHQALGLSTVSTAWGIGLIIG 186 (407)
Q Consensus 157 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 186 (407)
.-+.|++|+..|....+.++.......-+.
T Consensus 58 ~aLkdi~P~~~R~~i~~~~~~~~~~~k~~~ 87 (137)
T PF04281_consen 58 WALKDIFPPSVRNWISSTVSTTSSAVKSLF 87 (137)
T ss_pred HHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 346899999999988877765555444433
No 332
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=27.85 E-value=1.7e+02 Score=18.67 Aligned_cols=28 Identities=11% Similarity=0.237 Sum_probs=15.0
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhccccC
Q 015396 212 KFPYFLPCLCISLFAFGVTIAAFWLPET 239 (407)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 239 (407)
.+++.....+..+.+++.......+|++
T Consensus 28 ~~n~~~~~Ii~vi~~i~~~~~~~~i~~~ 55 (57)
T PF11151_consen 28 TYNFTTAAIIAVIFGIIVANIIAVIPKK 55 (57)
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 3445555566666665555554445543
No 333
>PRK10599 calcium/sodium:proton antiporter; Provisional
Probab=27.76 E-value=4.4e+02 Score=24.46 Aligned_cols=40 Identities=8% Similarity=0.017 Sum_probs=27.1
Q ss_pred HHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccccchhhHHHHHH
Q 015396 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVG 88 (407)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~ 88 (407)
...+...........-.+.+.+....+++|.++.- .|.+.
T Consensus 224 ~~~L~v~lv~Vv~lAe~lv~sIe~~v~~~Glp~af------iGvII 263 (366)
T PRK10599 224 AIWLIIHLIAVIAVTKMNASPLETLLTSMNAPVAF------TGFLV 263 (366)
T ss_pred HHHHHHHHHHHHHHHHHhHhhHHHHHHhcCCCHHH------HHHHH
Confidence 33333344344444666777888889999999988 88765
No 334
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=25.53 E-value=1.7e+02 Score=20.55 Aligned_cols=39 Identities=15% Similarity=0.102 Sum_probs=26.3
Q ss_pred HHhhhhhhhcccccCC-------hHHHHHHHHHHHHHHHHhhccch
Q 015396 96 ALTSVFWGLVADRYGR-------KPVIIMGTASVVIFNTLFGLSVN 134 (407)
Q Consensus 96 ~~~~~~~G~l~dr~Gr-------r~~~~~~~~~~~~~~~~~~~~~~ 134 (407)
....+.++++.+|..+ ++.+..+.++...+.++++...|
T Consensus 32 ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS 77 (86)
T PF10785_consen 32 TAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRS 77 (86)
T ss_pred HHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 4456667777776654 67777777777777777766444
No 335
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=24.75 E-value=1.8e+02 Score=18.06 Aligned_cols=26 Identities=19% Similarity=0.165 Sum_probs=17.0
Q ss_pred HhHHHHHHHHhchhHHHHHHHHHHHH
Q 015396 341 LSLYPFLERILGPIMVARIAGVLTIP 366 (407)
Q Consensus 341 ~~~~~~l~~~~~~~~~~~~~~~~~~~ 366 (407)
..++.+++++++..+...+...+..+
T Consensus 18 ~~~G~~lD~~~~t~p~~~~~g~llG~ 43 (55)
T PF09527_consen 18 FFLGYWLDKWFGTSPWFTLIGLLLGI 43 (55)
T ss_pred HHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 35888888899886665544444433
No 336
>PTZ00101 rhomboid-1 protease; Provisional
Probab=24.38 E-value=5e+02 Score=23.01 Aligned_cols=36 Identities=22% Similarity=0.270 Sum_probs=21.3
Q ss_pred HHHHHhhhhhhhccc-ccCChHHHHHHHHHHHHHHHH
Q 015396 93 FGRALTSVFWGLVAD-RYGRKPVIIMGTASVVIFNTL 128 (407)
Q Consensus 93 ~~~~~~~~~~G~l~d-r~Grr~~~~~~~~~~~~~~~~ 128 (407)
+.........|...+ ++|++|..++-.+....+.++
T Consensus 119 l~Nm~~l~~~G~~lE~~~G~~r~~ilYl~sGi~G~l~ 155 (278)
T PTZ00101 119 FFNVFFQLRMGFTLEKNYGIVKIIILYFLTGIYGNIL 155 (278)
T ss_pred HHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHHHHH
Confidence 444555556666555 489988775555544444444
No 337
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=23.80 E-value=4.3e+02 Score=23.34 Aligned_cols=34 Identities=24% Similarity=0.286 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHhh-ccchHHHHHHHHHHHhhhcc
Q 015396 117 MGTASVVIFNTLFG-LSVNFWMAVLTRFLLGSLNG 150 (407)
Q Consensus 117 ~~~~~~~~~~~~~~-~~~~~~~l~~~r~l~G~~~g 150 (407)
++.++++++.++.. ..++.|.+.+.-++.+++.+
T Consensus 4 ~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~ 38 (284)
T PF12805_consen 4 ATLLCFALASLLVGLLFPYPWLLILVLALLTFFFG 38 (284)
T ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHH
Confidence 34444433333333 33455555555444444433
No 338
>PF04346 EutH: Ethanolamine utilisation protein, EutH; InterPro: IPR007441 EutH is a bacterial membrane protein whose molecular function is unknown. It has been suggested that it may act as an ethanolamine transporter, responsible for carrying ethanolamine from the periplasm to the cytoplasm [].; GO: 0006810 transport, 0016021 integral to membrane
Probab=23.64 E-value=5.8e+02 Score=23.47 Aligned_cols=91 Identities=21% Similarity=0.254 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcccccCChHHHHHHHHHHH---HHHHHhhccchHHHHHHHHHHHhhhccch--hHHHHH
Q 015396 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVV---IFNTLFGLSVNFWMAVLTRFLLGSLNGLL--GPIKAY 158 (407)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~r~l~G~~~g~~--~~~~~~ 158 (407)
.|....+..++ -+..++.+++.+.+|.-+.+..+.++.. --.+...+++|......+-.+.|.-.|.. ...+.-
T Consensus 49 ~GI~~laP~la-~~l~~vi~Pl~~~~GaDPamfa~tiLA~DMGGY~LA~~la~~~~~~~fsG~ilgsmlG~TIvFtIPVa 127 (354)
T PF04346_consen 49 AGIMALAPVLA-AFLSPVIGPLFQAIGADPAMFAGTILANDMGGYQLAMELAQDPEAGIFSGLILGSMLGATIVFTIPVA 127 (354)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHhCCCHHHHHHHHhhhcCcCHHHHHHHcCChhhHHHHHHHHHHhhcccEEeehhhh
Confidence 44444333333 4556788889999999999888766653 22345556777777777767777654442 223333
Q ss_pred HhhhccccchhhhhHHH
Q 015396 159 ACEIFREEHQALGLSTV 175 (407)
Q Consensus 159 ~~~~~~~~~r~~~~~~~ 175 (407)
+.-.-+++++-.+.|+.
T Consensus 128 Lgii~k~D~~y~a~Gil 144 (354)
T PF04346_consen 128 LGIIEKEDHKYLAKGIL 144 (354)
T ss_pred hhhcChhhhHHHHHHHH
Confidence 43333445555555554
No 339
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=22.46 E-value=4.7e+02 Score=26.90 Aligned_cols=50 Identities=14% Similarity=-0.019 Sum_probs=30.0
Q ss_pred hhhhccccc----CChHHHHHHHHHHHHHHHHhhc-cchHHHHHHHHHHHhhhcc
Q 015396 101 FWGLVADRY----GRKPVIIMGTASVVIFNTLFGL-SVNFWMAVLTRFLLGSLNG 150 (407)
Q Consensus 101 ~~G~l~dr~----Grr~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~r~l~G~~~g 150 (407)
+.+-++|.= ||.+-++++.+++.++.+...+ .+..|.+...-++.+++.+
T Consensus 42 ia~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~ 96 (704)
T TIGR01666 42 IAAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFI 96 (704)
T ss_pred HhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence 345566643 4556677788888777766554 4556666655555554433
No 340
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=22.27 E-value=5.6e+02 Score=22.79 Aligned_cols=32 Identities=19% Similarity=0.178 Sum_probs=15.9
Q ss_pred HHHHHHHHHHhhhccch-hHH-HHHHhhhccccc
Q 015396 136 WMAVLTRFLLGSLNGLL-GPI-KAYACEIFREEH 167 (407)
Q Consensus 136 ~~l~~~r~l~G~~~g~~-~~~-~~~~~~~~~~~~ 167 (407)
+.-.+.-.+.+++.|.+ ... .-++.|....++
T Consensus 261 ~~~~~~~~~~a~aaG~~lyv~~~ell~~~~~~~~ 294 (317)
T PF02535_consen 261 SSDIVSGILLAFAAGTFLYVAFVELLPEEFHNKH 294 (317)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 33344445667765553 333 445555555443
No 341
>PF09605 Trep_Strep: Hypothetical bacterial integral membrane protein (Trep_Strep); InterPro: IPR011733 This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C terminus. If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae (strain ATCC BAA-255 / R6).
Probab=21.45 E-value=3.7e+02 Score=22.05 Aligned_cols=39 Identities=5% Similarity=0.109 Sum_probs=27.9
Q ss_pred HHHHHHHhhhhhhhcccccCChHHHHHHHHHHHHHHHHh
Q 015396 91 FMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF 129 (407)
Q Consensus 91 ~~~~~~~~~~~~G~l~dr~Grr~~~~~~~~~~~~~~~~~ 129 (407)
..+...++.++.-.+..|.++|-++.+..++.++...++
T Consensus 37 ~~i~ali~g~vyml~~~KV~K~G~~~i~~~i~gl~~~~~ 75 (186)
T PF09605_consen 37 PAIAALICGIVYMLMVAKVPKRGAFLIMGIIMGLIFFLM 75 (186)
T ss_pred HHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHH
Confidence 344556777888888899999988877766666655444
No 342
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=21.30 E-value=7.7e+02 Score=24.03 Aligned_cols=51 Identities=18% Similarity=0.124 Sum_probs=34.0
Q ss_pred HhhhccchhHH-HHHHhhhcc-ccchhhhhHHHHHHHHHHHHHHHHhhhhhcC
Q 015396 145 LGSLNGLLGPI-KAYACEIFR-EEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (407)
Q Consensus 145 ~G~~~g~~~~~-~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 195 (407)
.|+........ -..+.+.+| ++++...+|-++...++-..+-.++++.+..
T Consensus 292 Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir 344 (491)
T PF03219_consen 292 YGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIR 344 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33443344444 556677776 5666777888877777777777788888887
No 343
>COG5547 Small integral membrane protein [Function unknown]
Probab=20.90 E-value=2.1e+02 Score=18.21 Aligned_cols=40 Identities=28% Similarity=0.274 Sum_probs=18.1
Q ss_pred hHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhhccc
Q 015396 112 KPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGL 151 (407)
Q Consensus 112 r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 151 (407)
|..++.+++...++++.+.+.---..+++...+.|++.|.
T Consensus 8 kypIIgglvglliAili~t~GfwKtilviil~~lGv~iGl 47 (62)
T COG5547 8 KYPIIGGLVGLLIAILILTFGFWKTILVIILILLGVYIGL 47 (62)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344555555555555444322222334444455555443
No 344
>PLN02878 homogentisate phytyltransferase
Probab=20.67 E-value=4.7e+02 Score=23.22 Aligned_cols=73 Identities=15% Similarity=0.041 Sum_probs=34.4
Q ss_pred ccCChHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhhccchhHHHHHHhhhccccchhhhhHHHHHHHH
Q 015396 108 RYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWG 180 (407)
Q Consensus 108 r~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 180 (407)
|+|+|++..++..+..++........-.........+...+........-.=+...+.+.+....+.++..+-
T Consensus 195 ~lG~~~~~~i~~~ll~~aY~~~i~~g~~~~~~~~~~~~~~~h~~l~~~L~~rs~~vD~~sk~~i~~fY~fiwk 267 (280)
T PLN02878 195 RLGQKRVFWLCVNLLEMAYAAAILVGASSSFLWSKIITVLGHGILASILWQRAQSVDLSSKAAITSFYMFIWK 267 (280)
T ss_pred hhChHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhHhcCcccHHHHHHHHHHHHH
Confidence 6888888887776666655432221111111222333333333322222223344445556555666655544
No 345
>TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein. This alignment models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat.
Probab=20.01 E-value=4.9e+02 Score=23.39 Aligned_cols=37 Identities=11% Similarity=-0.048 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHhhhhhhchhhhHHHHHHhhcccccc
Q 015396 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKRE 77 (407)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 77 (407)
+.+..+.............+......+.+.+|+++..
T Consensus 170 ~~~~~~~~~~~~i~~~s~~~v~~~~~i~~~lgi~~~~ 206 (307)
T TIGR00367 170 FLIVLLIIGLTGLVVGSRLLVDGAVQIAEIFGISEKI 206 (307)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 3444444444444455556667778889999999877
Done!