BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015398
(407 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or267.
pdb|4HB5|B Chain B, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or267
Length = 169
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 87 PVFRSRMGAMLFLISALLSRGLDYVQADRDDPTPSLVTAPFGHASQEIVNLLLCGQAVPN 146
P+ + ++ LLS+G D D D TP A GH +EIV LLL A PN
Sbjct: 73 PLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGH--KEIVKLLLSKGADPN 130
Query: 147 VFD 149
D
Sbjct: 131 TSD 133
Score = 35.4 bits (80), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 87 PVFRSRMGAMLFLISALLSRGLDYVQADRDDPTPSLVTAPFGHASQEIVNLLLCGQAVPN 146
P+ + ++ LLS+G D D D TP A GH +EIV LLL A PN
Sbjct: 40 PLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGH--KEIVKLLLSKGADPN 97
Query: 147 VFD 149
D
Sbjct: 98 AKD 100
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 100 ISALLSRGLDYVQADRDDPTPSLVTAPFGHASQEIVNLLLCGQAVPNVFD 149
+ LL G D +D D TP A GH +EIV LLL A PN D
Sbjct: 20 VKDLLENGADPNASDSDGRTPLHYAAENGH--KEIVKLLLSKGADPNAKD 67
>pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or266.
pdb|4GMR|B Chain B, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or266
Length = 169
Score = 34.7 bits (78), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 87 PVFRSRMGAMLFLISALLSRGLDYVQADRDDPTPSLVTAPFGHASQEIVNLLLCGQAVPN 146
P+ + ++ LLS+G D D D TP + A GH +E+V LLL A PN
Sbjct: 73 PLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGH--KEVVKLLLSQGADPN 130
Query: 147 VFD 149
D
Sbjct: 131 TSD 133
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 87 PVFRSRMGAMLFLISALLSRGLDYVQADRDDPTPSLVTAPFGHASQEIVNLLLCGQAVPN 146
P+ + ++ LLS+G D D D TP + A GH +E+V LLL A PN
Sbjct: 40 PLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGH--KEVVKLLLSQGADPN 97
Query: 147 VFD 149
D
Sbjct: 98 AKD 100
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 100 ISALLSRGLDYVQADRDDPTPSLVTAPFGHASQEIVNLLLCGQAVPNVFD 149
+ LL G D +D D TP + A GH +E+V LLL A PN D
Sbjct: 20 VKDLLENGADVNASDSDGKTPLHLAAENGH--KEVVKLLLSQGADPNAKD 67
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 34.3 bits (77), Expect = 0.14, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 221 ERESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVW 274
+ E IR+AF +DK G G+IS + V+ + +L E++D + G G + +
Sbjct: 26 DSEEEIREAFRVEDKD-GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 84
Query: 275 SEFWQVI 281
EF Q++
Sbjct: 85 EEFVQMM 91
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 223 ESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVWSE 276
E IR+AF DK G G+IS + V+ + +L E++D + G G + + E
Sbjct: 86 EEEIREAFRVFDKD-GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 144
Query: 277 FWQVI 281
F Q++
Sbjct: 145 FVQMM 149
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 223 ESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVWSE 276
E IR+AF DK G G+IS + V+ + +L E++D + G G + + E
Sbjct: 83 EEEIREAFRVFDKD-GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 277 FWQVI 281
F Q++
Sbjct: 142 FVQMM 146
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 223 ESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVWSE 276
E IR+AF DK G G+IS + V+ + +L E++D + G G + + E
Sbjct: 83 EEEIREAFRVFDKD-GNGYISAAELRHVMTNLGEKLTDEEVDQMIREADIDGDGQVNYEE 141
Query: 277 FWQVI 281
F Q++
Sbjct: 142 FVQMM 146
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 223 ESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVWSE 276
E IR+AF DK G G+IS + V+ + +L E++D + G G + + E
Sbjct: 83 EEEIREAFRVFDKD-GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 277 FWQVI 281
F Q++
Sbjct: 142 FVQMM 146
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 223 ESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVWSE 276
E IR+AF DK G G+IS + V+ + +L E++D + G G + + E
Sbjct: 84 EEEIREAFRVFDKD-GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 142
Query: 277 FWQVI 281
F Q++
Sbjct: 143 FVQMM 147
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 223 ESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVWSE 276
E IR+AF DK G G+IS + V+ + +L E++D + G G + + E
Sbjct: 83 EEEIREAFRVFDKD-GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 277 FWQVI 281
F Q++
Sbjct: 142 FVQMM 146
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 223 ESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVWSE 276
E IR+AF DK G G+IS + V+ + +L E++D + G G + + E
Sbjct: 80 EEEIREAFRVFDKD-GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 138
Query: 277 FWQVI 281
F Q++
Sbjct: 139 FVQMM 143
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 223 ESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVWSE 276
E IR+AF DK G G+IS + V+ + +L E++D + G G + + E
Sbjct: 79 EEEIREAFRVFDKD-GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 137
Query: 277 FWQVI 281
F Q++
Sbjct: 138 FVQMM 142
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 223 ESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVWSE 276
E IR+AF DK G G+IS + V+ + +L E++D + G G + + E
Sbjct: 88 EEEIREAFRVFDKD-GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 146
Query: 277 FWQVI 281
F Q++
Sbjct: 147 FVQMM 151
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 223 ESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVWSE 276
E IR+AF DK G G+IS + V+ + +L E++D + G G + + E
Sbjct: 82 EEEIREAFRVFDKD-GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 140
Query: 277 FWQVI 281
F Q++
Sbjct: 141 FVQMM 145
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 223 ESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVWSE 276
E IR+AF DK G G+IS + V+ + +L E++D + G G + + E
Sbjct: 82 EEEIREAFRVFDKD-GNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEE 140
Query: 277 FWQVI 281
F Q++
Sbjct: 141 FVQMM 145
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 223 ESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVWSE 276
E IR+AF DK G G+IS + V+ + +L E++D + G G + + E
Sbjct: 82 EEEIREAFRVFDKD-GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 140
Query: 277 FWQVI 281
F Q++
Sbjct: 141 FVQMM 145
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 223 ESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVWSE 276
E IR+AF DK G G+IS + V+ + +L E++D + G G + + E
Sbjct: 80 EEEIREAFRVFDKD-GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 138
Query: 277 FWQVI 281
F Q++
Sbjct: 139 FVQMM 143
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 223 ESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVWSE 276
E IR+AF DK G G+IS + V+ + +L E++D + G G + + E
Sbjct: 78 EEEIREAFRVFDKD-GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 136
Query: 277 FWQVI 281
F Q++
Sbjct: 137 FVQMM 141
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 223 ESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVWSE 276
E IR+AF DK G G+IS + V+ + +L E++D + G G + + E
Sbjct: 82 EEEIREAFRVFDKD-GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 140
Query: 277 FWQVI 281
F Q++
Sbjct: 141 FVQMM 145
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 223 ESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVWSE 276
E +++AF DK G G FIS + V+ + +L E++D + G G + + E
Sbjct: 79 EEELKEAFRVFDKDGNG-FISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEE 137
Query: 277 FWQVI 281
F QV+
Sbjct: 138 FVQVM 142
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 223 ESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVWSE 276
E +++AF DK G G FIS + V+ + +L E++D + G G + + E
Sbjct: 82 EEELKEAFRVFDKDGNG-FISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEE 140
Query: 277 FWQVI 281
F QV+
Sbjct: 141 FVQVM 145
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 223 ESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVWSE 276
E IR+AF DK G G+IS + V+ + +L E++D + G G + + E
Sbjct: 80 EEEIREAFRVFDKD-GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 138
Query: 277 FWQVI 281
F Q++
Sbjct: 139 FVQMM 143
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 223 ESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVWSE 276
E IR+AF DK G G+IS + V+ + +L E++D + G G + + E
Sbjct: 83 EEEIREAFRVFDKD-GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 277 FWQVI 281
F Q++
Sbjct: 142 FVQMM 146
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 223 ESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVWSE 276
E IR+AF DK G G+IS + V+ + +L E++D + G G + + E
Sbjct: 81 EEEIREAFRVFDKD-GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 139
Query: 277 FWQVI 281
F Q++
Sbjct: 140 FVQMM 144
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 223 ESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVWSE 276
E +++AF DK G G FIS + V+ + +L E++D + G G + + E
Sbjct: 82 EEKLKEAFRVFDKDGNG-FISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEE 140
Query: 277 FWQVI 281
F QV+
Sbjct: 141 FVQVM 145
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 221 ERESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVW 274
+ E IR+AF DK G G+IS + V+ + +L E++D + G G + +
Sbjct: 380 DSEEEIREAFRVFDKD-GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 438
Query: 275 SEFWQVI 281
EF Q++
Sbjct: 439 EEFVQMM 445
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 221 ERESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVW 274
+ E IR+AF DK G G+IS + V+ + +L E++D + G G + +
Sbjct: 380 DSEEEIREAFRVFDKD-GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 438
Query: 275 SEFWQVI 281
EF Q++
Sbjct: 439 EEFVQMM 445
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 221 ERESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVW 274
+ E IR+AF DK G G+IS + V+ + +L E++D + G G + +
Sbjct: 347 DSEEEIREAFRVFDKD-GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 405
Query: 275 SEFWQVI 281
EF Q++
Sbjct: 406 EEFVQMM 412
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 221 ERESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVW 274
+ E IR+AF DK G G+IS + V+ + +L E++D + G G + +
Sbjct: 381 DSEEEIREAFRVFDKD-GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 439
Query: 275 SEFWQVI 281
EF Q++
Sbjct: 440 EEFVQMM 446
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 221 ERESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVW 274
+ E IR+AF DK G G+IS + V+ + +L E++D + G G + +
Sbjct: 381 DSEEEIREAFRVFDKD-GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 439
Query: 275 SEFWQVI 281
EF Q++
Sbjct: 440 EEFVQMM 446
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 221 ERESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVW 274
+ E IR+AF DK G G+IS + V+ + +L E++D + G G + +
Sbjct: 347 DSEEEIREAFRVFDKD-GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 405
Query: 275 SEFWQVI 281
EF Q++
Sbjct: 406 EEFVQMM 412
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 221 ERESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVW 274
+ E IR+AF DK G G+IS + V+ + +L E++D + G G + +
Sbjct: 381 DSEEEIREAFRVFDKD-GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 439
Query: 275 SEFWQVI 281
EF Q++
Sbjct: 440 EEFVQMM 446
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 221 ERESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVW 274
+ E IR+AF DK G G+IS + V+ + +L E++D + G G + +
Sbjct: 382 DSEEEIREAFRVFDKD-GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 440
Query: 275 SEFWQVI 281
EF Q++
Sbjct: 441 EEFVQMM 447
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 221 ERESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVW 274
+ E IR+AF DK G G+IS + V+ + +L E++D + G G + +
Sbjct: 380 DSEEEIREAFRVFDKD-GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 438
Query: 275 SEFWQVI 281
EF Q++
Sbjct: 439 EEFVQMM 445
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 221 ERESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVW 274
+ E IR+AF DK G G+IS + V+ + +L E++D + G G + +
Sbjct: 381 DSEEEIREAFRVFDKD-GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 439
Query: 275 SEFWQVI 281
EF Q++
Sbjct: 440 EEFVQMM 446
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 221 ERESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVW 274
+ E IR+AF DK G G+IS + V+ + +L E++D + G G + +
Sbjct: 344 DSEEEIREAFRVFDKD-GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 402
Query: 275 SEFWQVI 281
EF Q++
Sbjct: 403 EEFVQMM 409
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 221 ERESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVW 274
+ E IR+AF DK G G+IS + V+ + +L E++D + G G + +
Sbjct: 381 DSEEEIREAFRVFDKD-GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 439
Query: 275 SEFWQVI 281
EF Q++
Sbjct: 440 EEFVQMM 446
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Query: 219 LEERESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFI 272
+++ E IR+AF DK G GFIS + V+ + +L E++D + G G +
Sbjct: 76 MKDSEEEIREAFRVFDKD-GNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 134
Query: 273 VWSEFWQVI 281
+ EF ++
Sbjct: 135 NYEEFVTMM 143
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 221 ERESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVW 274
+ E IR+AF DK G G+IS + V+ + +L E++D + G G + +
Sbjct: 372 DSEEEIREAFRVFDKD-GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 430
Query: 275 SEFWQVI 281
EF Q++
Sbjct: 431 EEFVQMM 437
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 32.3 bits (72), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
Query: 220 EERESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIV 273
E+ + +R+AF DK G G+IS + ++++ + + L E LD + GSG +
Sbjct: 87 EQMQQELREAFRLYDKE-GNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVD 145
Query: 274 WSEFWQVI 281
+ EF V+
Sbjct: 146 FEEFMGVM 153
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 32.0 bits (71), Expect = 0.60, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 221 ERESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVW 274
+ E IR+AF DK G G+IS + V+ + +L E++D + G G + +
Sbjct: 2 DSEEEIREAFRVFDKD-GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 60
Query: 275 SEFWQVI 281
EF Q++
Sbjct: 61 EEFVQMM 67
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 32.0 bits (71), Expect = 0.60, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 221 ERESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVW 274
+ E IR+AF DK G G+IS + V+ + +L E++D + G G + +
Sbjct: 6 DSEEEIREAFRVFDKD-GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 64
Query: 275 SEFWQVI 281
EF Q++
Sbjct: 65 EEFVQMM 71
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 32.0 bits (71), Expect = 0.60, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 221 ERESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVW 274
+ E IR+AF DK G G+IS + V+ + +L E++D + G G + +
Sbjct: 2 DSEEEIREAFRVFDKD-GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 60
Query: 275 SEFWQVI 281
EF Q++
Sbjct: 61 EEFVQMM 67
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 32.0 bits (71), Expect = 0.60, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 221 ERESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVW 274
+ E IR+AF DK G G+IS + V+ + +L E++D + G G + +
Sbjct: 5 DSEEEIREAFRVFDKD-GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 63
Query: 275 SEFWQVI 281
EF Q++
Sbjct: 64 EEFVQMM 70
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 32.0 bits (71), Expect = 0.60, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 221 ERESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVW 274
+ E IR+AF DK G G+IS + V+ + +L E++D + G G + +
Sbjct: 3 DSEEEIREAFRVFDKD-GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 61
Query: 275 SEFWQVI 281
EF Q++
Sbjct: 62 EEFVQMM 68
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 32.0 bits (71), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 223 ESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVWSE 276
E IR+AF DK G GFIS + V+ + +L E++D + G G + + E
Sbjct: 83 EEEIREAFRVFDKD-GNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 277 FWQVI 281
F ++
Sbjct: 142 FVTMM 146
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 32.0 bits (71), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 223 ESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVWSE 276
E IR+AF DK G GFIS + V+ + +L E++D + G G + + E
Sbjct: 83 EEEIREAFRVFDKD-GNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 277 FWQVI 281
F ++
Sbjct: 142 FVTMM 146
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 32.0 bits (71), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 223 ESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVWSE 276
E IR+AF DK G GFIS + V+ + +L E++D + G G + + E
Sbjct: 82 EEEIREAFRVFDKD-GNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 140
Query: 277 FWQVI 281
F ++
Sbjct: 141 FVTMM 145
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 32.0 bits (71), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 223 ESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVWSE 276
E IR+AF DK G GFIS + V+ + +L E++D + G G + + E
Sbjct: 83 EEEIREAFRVFDKD-GNGFISAAELRHVMTNLGEKLTDEEVDEMIRESDIDGDGQVNYEE 141
Query: 277 FWQVI 281
F ++
Sbjct: 142 FVTMM 146
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 32.0 bits (71), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 223 ESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVWSE 276
E IR+AF DK G G+IS + V+ + L E++D + G G + + E
Sbjct: 83 EEEIREAFRVFDKD-GNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 277 FWQVI 281
F Q++
Sbjct: 142 FVQMM 146
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 32.0 bits (71), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 223 ESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVWSE 276
E IR+AF DK G G+IS + V+ + L E++D + G G + + E
Sbjct: 82 EEEIREAFRVFDKD-GNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEE 140
Query: 277 FWQVI 281
F Q++
Sbjct: 141 FVQMM 145
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 32.0 bits (71), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 223 ESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVWSE 276
E IR+AF DK G GFIS + V+ + +L E++D + G G + + E
Sbjct: 82 EEEIREAFRVFDKD-GNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 140
Query: 277 FWQVI 281
F ++
Sbjct: 141 FVTMM 145
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 32.0 bits (71), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Query: 221 ERESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVW 274
+ E IR+AF DK G GF+S + V+ +L E++D + G G + +
Sbjct: 80 DNEEEIREAFRVFDKD-GNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNY 138
Query: 275 SEFWQVI 281
EF +V+
Sbjct: 139 EEFVRVL 145
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 31.6 bits (70), Expect = 0.74, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 223 ESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVWSE 276
E IR+AF DK G G+IS + V+ + +L E++D + G G + + E
Sbjct: 1 EEEIREAFRVFDKD-GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 59
Query: 277 FWQVI 281
F Q++
Sbjct: 60 FVQMM 64
>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or265.
pdb|4HQD|B Chain B, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or265
Length = 169
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 99 LISALLSRGLDYVQADRDDPTPSLVTAPFGHASQEIVNLLLCGQAVPNVFD 149
++ L+S+G D D D TP A GH +EIV LL+ A N D
Sbjct: 85 IVKLLISKGADVNAKDSDGRTPLHYAAKEGH--KEIVKLLISKGADVNTSD 133
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 99 LISALLSRGLDYVQADRDDPTPSLVTAPFGHASQEIVNLLLCGQAVPNVFD 149
++ L+S+G D D D TP A GH +EIV LL+ A N D
Sbjct: 52 IVKLLISKGADVNAKDSDGRTPLHYAAKEGH--KEIVKLLISKGADVNAKD 100
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 30.8 bits (68), Expect = 1.3, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 221 ERESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVW 274
+ E IR+AF DK G G+IS + V+ + +L E++D + G G + +
Sbjct: 4 DSEEEIREAFRVFDKD-GNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 62
Query: 275 SEFWQVI 281
+F Q++
Sbjct: 63 EDFVQMM 69
>pdb|4F6R|D Chain D, Tubulin:stathmin-Like Domain Complex
Length = 169
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 87 PVFRSRMGAMLFLISALLSRGLDYVQADRDDPTPSLVTAPFGHASQEIVNLLLCGQAVPN 146
P+ + + L ++ LL G D AD+ TP + A +GH EIV +LL A N
Sbjct: 50 PLHLAAIKGHLEIVEVLLKHGADVNAADKMGDTPLHLAALYGHL--EIVEVLLKNGADVN 107
Query: 147 VFD 149
D
Sbjct: 108 ATD 110
>pdb|1MJ0|A Chain A, Sank E3_5: An Artificial Ankyrin Repeat Protein
Length = 166
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 87 PVFRSRMGAMLFLISALLSRGLDYVQADRDDPTPSLVTAPFGHASQEIVNLLLCGQAVPN 146
P+ + L ++ LL G D D D TP + A +GH EIV +LL A N
Sbjct: 83 PLHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHL--EIVEVLLKHGADVN 140
Query: 147 VFD 149
D
Sbjct: 141 AQD 143
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 30.0 bits (66), Expect = 2.2, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 223 ESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIVWSE 276
+ +R+AF DK G G +IS + ++++ + + L E LD + GSG + + E
Sbjct: 2 QQELREAFRLYDKEGNG-YISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEE 60
Query: 277 FWQVI 281
F V+
Sbjct: 61 FMGVM 65
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 7/63 (11%)
Query: 223 ESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDH------LCGSGFIVWSE 276
E IR+AF DK G G+IS + V + +L E++D + G G + + E
Sbjct: 82 EEEIREAFRVFDKD-GNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEE 140
Query: 277 FWQ 279
F Q
Sbjct: 141 FVQ 143
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 7/63 (11%)
Query: 223 ESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDH------LCGSGFIVWSE 276
E IR+AF DK G G+IS + V + +L E++D + G G + + E
Sbjct: 83 EEEIREAFRVFDKD-GNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQVNYEE 141
Query: 277 FWQ 279
F Q
Sbjct: 142 FVQ 144
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 7/63 (11%)
Query: 223 ESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDH------LCGSGFIVWSE 276
E IR+AF DK G G+IS + V + +L E++D + G G + + E
Sbjct: 82 EEEIREAFRVFDKD-GNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEE 140
Query: 277 FWQ 279
F Q
Sbjct: 141 FVQ 143
>pdb|2V4H|C Chain C, Nemo Cc2-Lz Domain - 1d5 Darpin Complex
pdb|2V4H|D Chain D, Nemo Cc2-Lz Domain - 1d5 Darpin Complex
Length = 136
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 97 LFLISALLSRGLDYVQADRDDPTPSLVTAPFGHASQEIVNLLLCGQAVPNVFD 149
L ++ LL G D D D TP + A FGH EIV +LL A N D
Sbjct: 60 LEIVEVLLKHGADVNAHDNDGSTPLHLAALFGHL--EIVEVLLKHGADVNAQD 110
>pdb|2L6B|A Chain A, Nrc Consensus Ankyrin Repeat Protein Solution Structure
Length = 115
Score = 29.6 bits (65), Expect = 3.5, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 100 ISALLSRGLDYVQADRDDPTPSLVTAPFGHASQEIVNLLLCGQAVPN 146
+ LLS+G D +D TP + A GHA EIV LLL A N
Sbjct: 25 VKKLLSKGADVNARSKDGNTPLHLAAKNGHA--EIVKLLLAKGADVN 69
>pdb|2Y1L|E Chain E, Caspase-8 In Complex With Darpin-8.4
pdb|2Y1L|F Chain F, Caspase-8 In Complex With Darpin-8.4
Length = 169
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Query: 87 PVFRSRMGAMLFLISALLSRGLDYVQADRDDPTPSLVTAPFGHASQEIVNLLLCGQAVPN 146
P+ + L ++ LL G D D TP + A FGH EIV +LL A N
Sbjct: 50 PLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHL--EIVEVLLKNGADVN 107
Query: 147 VFD 149
D
Sbjct: 108 AND 110
Score = 28.1 bits (61), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 87 PVFRSRMGAMLFLISALLSRGLDYVQADRDDPTPSLVTAPFGHASQEIVNLLLCGQAVPN 146
P+ + + L ++ LL G D D + TP + A FGH EIV +LL A N
Sbjct: 83 PLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHL--EIVEVLLKNGADVN 140
Query: 147 VFD 149
D
Sbjct: 141 AQD 143
>pdb|1RTY|A Chain A, Crystal Structure Of Bacillus Subtilis Yvqk, A Putative
Atp- Binding Cobalamin Adenosyltransferase, The North
East Structural Genomics Target Sr128
pdb|1RTY|B Chain B, Crystal Structure Of Bacillus Subtilis Yvqk, A Putative
Atp- Binding Cobalamin Adenosyltransferase, The North
East Structural Genomics Target Sr128
pdb|1RTY|C Chain C, Crystal Structure Of Bacillus Subtilis Yvqk, A Putative
Atp- Binding Cobalamin Adenosyltransferase, The North
East Structural Genomics Target Sr128
Length = 193
Score = 28.9 bits (63), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 23 FLILVALVKSMGEILFSCGSNKRAVLAKALEGLSIESGSDMQKVIRVDAYTSQATALQKL 82
F L A + ++ LF CG + V + L+ ES S ++ R+DAYT++A L+K
Sbjct: 53 FEDLTAELLTIQHELFDCGGDLAIVTERKDYKLTEESVSFLE--TRIDAYTAEAPELKKF 110
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 28.9 bits (63), Expect = 5.9, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Query: 220 EERESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIV 273
EE + + AFD D GGG IS + V+R +E+LD + GSG I
Sbjct: 16 EEMIAEFKAAFDMFDADGGGD-ISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTID 74
Query: 274 WSEF 277
+ EF
Sbjct: 75 FEEF 78
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 28.5 bits (62), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
Query: 220 EERESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHLC------GSGFIV 273
EE++ IR+AFD D + G G I + + +R +E++ + GSG I
Sbjct: 4 EEQKQEIREAFDLFD-TDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTID 62
Query: 274 WSEFWQVI 281
+ EF Q++
Sbjct: 63 FEEFLQMM 70
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,754,256
Number of Sequences: 62578
Number of extensions: 465837
Number of successful extensions: 1133
Number of sequences better than 100.0: 73
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 73
Number of HSP's that attempted gapping in prelim test: 1068
Number of HSP's gapped (non-prelim): 130
length of query: 407
length of database: 14,973,337
effective HSP length: 101
effective length of query: 306
effective length of database: 8,652,959
effective search space: 2647805454
effective search space used: 2647805454
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)