Query 015398
Match_columns 407
No_of_seqs 187 out of 231
Neff 4.9
Searched_HMMs 46136
Date Fri Mar 29 05:56:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015398.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015398hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2871 Uncharacterized conser 100.0 8.1E-95 1.8E-99 716.8 17.3 351 2-407 37-449 (449)
2 PF13898 DUF4205: Domain of un 100.0 8.9E-85 1.9E-89 651.9 23.6 216 1-217 32-276 (342)
3 KOG0027 Calmodulin and related 99.1 1.1E-10 2.4E-15 103.8 4.9 91 223-315 7-103 (151)
4 cd05022 S-100A13 S-100A13: S-1 98.9 4.4E-09 9.6E-14 87.5 6.3 68 218-286 2-78 (89)
5 KOG0027 Calmodulin and related 98.8 5.2E-09 1.1E-13 93.1 6.5 59 224-283 85-149 (151)
6 COG5126 FRQ1 Ca2+-binding prot 98.7 2.2E-08 4.8E-13 91.8 6.6 59 224-283 92-156 (160)
7 cd05027 S-100B S-100B: S-100B 98.7 4.8E-08 1E-12 80.8 7.1 64 219-283 3-79 (88)
8 PF13499 EF-hand_7: EF-hand do 98.7 4.5E-08 9.7E-13 74.8 6.2 56 225-281 1-66 (66)
9 COG5126 FRQ1 Ca2+-binding prot 98.7 1.7E-08 3.7E-13 92.6 3.9 84 224-313 20-108 (160)
10 cd05025 S-100A1 S-100A1: S-100 98.5 2.2E-07 4.7E-12 76.4 7.1 66 218-284 3-81 (92)
11 cd05026 S-100Z S-100Z: S-100Z 98.5 3.3E-07 7E-12 76.2 6.9 67 217-284 3-82 (93)
12 cd05031 S-100A10_like S-100A10 98.5 4.2E-07 9.2E-12 75.1 6.8 64 219-282 3-78 (94)
13 cd05029 S-100A6 S-100A6: S-100 98.4 8.4E-07 1.8E-11 73.4 6.8 67 218-284 4-80 (88)
14 cd00213 S-100 S-100: S-100 dom 98.3 1.9E-06 4.1E-11 69.8 5.9 66 220-286 4-82 (88)
15 smart00027 EH Eps15 homology d 98.2 4.2E-06 9.1E-11 69.3 7.4 64 222-288 8-77 (96)
16 KOG0028 Ca2+-binding protein ( 98.2 9.1E-07 2E-11 81.2 3.6 93 220-318 29-127 (172)
17 cd00052 EH Eps15 homology doma 98.2 2.6E-06 5.7E-11 64.3 5.3 53 227-282 2-60 (67)
18 KOG0030 Myosin essential light 98.2 2.4E-06 5.1E-11 77.0 5.6 59 224-283 88-151 (152)
19 PTZ00183 centrin; Provisional 98.1 3.2E-06 7E-11 73.5 5.0 88 222-315 15-108 (158)
20 PTZ00184 calmodulin; Provision 98.1 3.7E-06 7.9E-11 71.9 4.8 85 223-313 10-100 (149)
21 KOG0031 Myosin regulatory ligh 98.0 4E-06 8.7E-11 76.7 4.1 84 224-313 32-117 (171)
22 KOG0030 Myosin essential light 98.0 4.3E-06 9.4E-11 75.3 3.4 85 224-313 11-104 (152)
23 KOG0028 Ca2+-binding protein ( 98.0 1.2E-05 2.5E-10 74.1 5.9 58 223-281 105-168 (172)
24 cd05023 S-100A11 S-100A11: S-1 97.9 4.6E-05 1E-09 63.2 7.3 68 218-285 3-82 (89)
25 cd00051 EFh EF-hand, calcium b 97.9 3.4E-05 7.3E-10 55.2 5.6 55 226-281 2-62 (63)
26 PTZ00183 centrin; Provisional 97.9 3.1E-05 6.8E-10 67.3 6.4 58 224-282 90-153 (158)
27 PF14658 EF-hand_9: EF-hand do 97.8 3.1E-05 6.6E-10 61.6 5.4 56 228-284 2-65 (66)
28 PF13833 EF-hand_8: EF-hand do 97.8 3.3E-05 7.1E-10 57.0 5.2 44 239-282 2-52 (54)
29 cd05030 calgranulins Calgranul 97.8 4.3E-05 9.2E-10 62.9 6.0 66 219-284 3-80 (88)
30 PTZ00184 calmodulin; Provision 97.8 7E-05 1.5E-09 64.0 6.7 58 224-282 84-147 (149)
31 PF13405 EF-hand_6: EF-hand do 97.7 3.5E-05 7.7E-10 51.5 3.7 30 225-255 1-31 (31)
32 PLN02964 phosphatidylserine de 97.6 5E-05 1.1E-09 83.0 4.4 81 224-315 143-233 (644)
33 KOG0031 Myosin regulatory ligh 97.6 0.00015 3.2E-09 66.6 6.4 61 223-284 100-166 (171)
34 PF00036 EF-hand_1: EF hand; 97.6 9.9E-05 2.1E-09 49.4 3.7 29 225-254 1-29 (29)
35 KOG0034 Ca2+/calmodulin-depend 97.5 0.00016 3.4E-09 68.1 6.0 59 224-283 104-175 (187)
36 KOG0037 Ca2+-binding protein, 97.2 0.00033 7.1E-09 67.3 3.7 77 224-313 124-206 (221)
37 cd00252 SPARC_EC SPARC_EC; ext 97.0 0.0013 2.9E-08 57.4 6.0 62 220-286 44-111 (116)
38 KOG0036 Predicted mitochondria 96.0 0.012 2.6E-07 61.4 5.9 62 220-282 78-145 (463)
39 PLN02964 phosphatidylserine de 95.9 0.016 3.5E-07 63.8 6.8 60 224-284 179-244 (644)
40 KOG0038 Ca2+-binding kinase in 95.9 0.0096 2.1E-07 54.7 4.1 61 222-283 106-177 (189)
41 KOG0044 Ca2+ sensor (EF-Hand s 95.6 0.031 6.6E-07 53.1 6.7 86 224-315 26-118 (193)
42 PF13202 EF-hand_5: EF hand; P 95.6 0.015 3.2E-07 37.5 3.2 25 226-251 1-25 (25)
43 KOG0377 Protein serine/threoni 95.5 0.024 5.1E-07 59.9 6.0 58 225-283 548-615 (631)
44 KOG0036 Predicted mitochondria 95.4 0.015 3.3E-07 60.7 4.0 60 220-280 10-76 (463)
45 KOG0034 Ca2+/calmodulin-depend 95.3 0.023 5.1E-07 53.6 4.5 84 224-313 33-120 (187)
46 smart00054 EFh EF-hand, calciu 95.0 0.028 6E-07 33.9 2.9 28 226-254 2-29 (29)
47 KOG0046 Ca2+-binding actin-bun 94.4 0.078 1.7E-06 57.0 6.3 62 224-287 19-89 (627)
48 KOG0041 Predicted Ca2+-binding 94.4 0.065 1.4E-06 51.6 5.0 57 224-281 99-161 (244)
49 cd05024 S-100A10 S-100A10: A s 94.3 0.18 3.9E-06 42.6 6.9 63 219-283 3-76 (91)
50 PRK12309 transaldolase/EF-hand 93.9 0.092 2E-06 54.8 5.6 50 222-281 332-383 (391)
51 KOG0037 Ca2+-binding protein, 93.6 0.079 1.7E-06 51.2 4.0 58 224-282 57-121 (221)
52 PF12763 EF-hand_4: Cytoskelet 93.2 0.28 6.2E-06 42.1 6.5 54 224-281 10-69 (104)
53 KOG4065 Uncharacterized conser 93.1 0.13 2.7E-06 45.8 4.2 53 227-280 70-142 (144)
54 KOG0044 Ca2+ sensor (EF-Hand s 92.7 0.14 2.9E-06 48.8 4.1 59 223-282 99-174 (193)
55 KOG4251 Calcium binding protei 92.1 0.22 4.7E-06 49.5 4.8 80 201-282 77-167 (362)
56 PF14788 EF-hand_10: EF hand; 90.9 0.42 9E-06 36.5 4.2 40 242-281 2-47 (51)
57 KOG0038 Ca2+-binding kinase in 89.9 0.3 6.5E-06 45.2 3.2 42 267-313 83-124 (189)
58 PF13833 EF-hand_8: EF-hand do 89.2 0.67 1.5E-05 33.8 4.1 29 224-253 25-53 (54)
59 PF00036 EF-hand_1: EF hand; 87.6 0.93 2E-05 30.2 3.6 16 267-282 12-27 (29)
60 KOG4223 Reticulocalbin, calume 86.9 0.47 1E-05 48.4 2.7 90 222-315 161-259 (325)
61 PF13499 EF-hand_7: EF-hand do 85.2 1.6 3.4E-05 32.9 4.3 31 220-251 36-66 (66)
62 cd05031 S-100A10_like S-100A10 83.7 0.96 2.1E-05 37.2 2.7 42 224-266 51-92 (94)
63 PF09279 EF-hand_like: Phospho 79.6 8.7 0.00019 30.6 6.8 61 225-287 1-73 (83)
64 KOG0377 Protein serine/threoni 79.6 1.8 3.9E-05 46.2 3.5 108 171-280 396-524 (631)
65 KOG4223 Reticulocalbin, calume 73.9 3.5 7.6E-05 42.2 3.7 93 222-317 75-183 (325)
66 PF08726 EFhand_Ca_insen: Ca2+ 73.1 2.4 5.1E-05 34.2 1.9 52 224-282 6-68 (69)
67 PF05517 p25-alpha: p25-alpha 68.9 14 0.00031 33.5 6.2 55 227-282 2-68 (154)
68 KOG0040 Ca2+-binding actin-bun 68.1 8.5 0.00019 46.6 5.5 84 220-308 2249-2345(2399)
69 PF14788 EF-hand_10: EF hand; 64.7 11 0.00025 28.8 3.9 32 222-254 19-50 (51)
70 cd00051 EFh EF-hand, calcium b 63.7 9 0.0002 26.5 3.1 27 224-251 36-62 (63)
71 KOG2643 Ca2+ binding protein, 57.9 4.4 9.6E-05 43.2 0.9 78 222-311 231-332 (489)
72 KOG2427 Uncharacterized conser 55.2 7.7 0.00017 40.7 2.1 37 3-39 30-85 (391)
73 KOG0751 Mitochondrial aspartat 54.4 16 0.00035 39.8 4.3 44 221-265 176-219 (694)
74 KOG0751 Mitochondrial aspartat 52.5 7.6 0.00016 42.2 1.6 78 225-313 109-195 (694)
75 cd00052 EH Eps15 homology doma 52.0 17 0.00037 26.8 3.0 30 224-254 33-62 (67)
76 cd05025 S-100A1 S-100A1: S-100 47.4 27 0.00058 28.4 3.8 32 224-256 52-83 (92)
77 KOG1029 Endocytic adaptor prot 47.0 30 0.00065 39.7 5.1 64 224-290 195-264 (1118)
78 smart00027 EH Eps15 homology d 45.7 29 0.00064 28.4 3.8 31 224-255 44-74 (96)
79 PF10591 SPARC_Ca_bdg: Secrete 43.8 17 0.00036 31.5 2.1 52 224-279 54-112 (113)
80 KOG0042 Glycerol-3-phosphate d 43.6 30 0.00064 38.4 4.3 59 227-286 596-660 (680)
81 cd05026 S-100Z S-100Z: S-100Z 43.1 34 0.00075 28.2 3.8 32 224-256 53-84 (93)
82 PF05042 Caleosin: Caleosin re 42.1 64 0.0014 30.6 5.8 65 180-253 56-124 (174)
83 cd00213 S-100 S-100: S-100 dom 40.0 42 0.0009 26.8 3.8 30 224-254 51-80 (88)
84 PLN02230 phosphoinositide phos 38.1 1.2E+02 0.0027 33.8 8.1 79 202-284 9-103 (598)
85 cd05030 calgranulins Calgranul 37.6 49 0.0011 27.0 3.8 32 223-255 50-81 (88)
86 cd00252 SPARC_EC SPARC_EC; ext 37.6 37 0.0008 29.7 3.3 27 224-251 80-106 (116)
87 KOG2243 Ca2+ release channel ( 35.8 40 0.00086 41.2 3.9 56 229-287 4062-4124(5019)
88 cd05029 S-100A6 S-100A6: S-100 35.6 54 0.0012 27.0 3.8 32 224-256 51-82 (88)
89 KOG2871 Uncharacterized conser 33.8 19 0.00042 37.9 1.1 137 93-266 218-363 (449)
90 KOG4666 Predicted phosphate ac 29.6 1E+02 0.0022 32.3 5.3 58 224-282 296-358 (412)
91 KOG0169 Phosphoinositide-speci 29.3 80 0.0017 36.0 4.9 65 221-286 133-203 (746)
92 PF12896 Apc4: Anaphase-promot 27.6 55 0.0012 30.4 2.9 68 71-148 25-92 (210)
93 cd05023 S-100A11 S-100A11: S-1 27.0 92 0.002 25.7 3.8 31 224-255 52-82 (89)
94 PLN02228 Phosphoinositide phos 25.4 2.3E+02 0.005 31.5 7.5 82 200-286 2-95 (567)
95 PLN02222 phosphoinositide phos 25.1 1.7E+02 0.0038 32.5 6.5 82 200-286 3-93 (581)
96 KOG2643 Ca2+ binding protein, 24.5 1.9E+02 0.0042 31.3 6.4 58 221-280 315-381 (489)
97 cd05022 S-100A13 S-100A13: S-1 23.8 1.1E+02 0.0023 25.5 3.7 31 224-255 47-77 (89)
98 PRK13778 paaA phenylacetate-Co 23.0 72 0.0016 32.8 3.0 36 246-281 240-280 (314)
99 PRK11409 antitoxin YefM; Provi 22.5 67 0.0015 26.4 2.2 34 3-36 28-71 (83)
100 PRK12309 transaldolase/EF-hand 22.3 80 0.0017 33.3 3.2 27 226-253 359-385 (391)
101 KOG2562 Protein phosphatase 2 21.5 2.2E+02 0.0048 31.0 6.2 79 230-318 284-372 (493)
102 PF09069 EF-hand_3: EF-hand; 21.4 1.4E+02 0.0029 25.3 3.8 60 223-284 2-76 (90)
103 KOG1955 Ral-GTPase effector RA 21.4 1.6E+02 0.0035 32.5 5.2 59 220-282 228-292 (737)
104 PF11628 TCR_zetazeta: T-cell 20.8 68 0.0015 22.6 1.5 12 95-106 10-21 (33)
No 1
>KOG2871 consensus Uncharacterized conserved protein [Function unknown]
Probab=100.00 E-value=8.1e-95 Score=716.84 Aligned_cols=351 Identities=39% Similarity=0.620 Sum_probs=312.4
Q ss_pred ceeccCCCchhhHHHHHHH-HHHHH----------------HHHHHHHHHHHHHh--ccCCCceEEE-ee----------
Q 015398 2 GLVQHEGGPCGVLAAIQVI-LQFLI----------------LVALVKSMGEILFS--CGSNKRAVLA-KA---------- 51 (407)
Q Consensus 2 gLvQ~~GGPCgVlA~VQA~-LK~lL----------------~~~L~~Ala~IL~~--a~~~~~~~v~-l~---------- 51 (407)
||+|++||||||+|+|||| ||+++ ++.|..++|||+-. |...+.+++. +.
T Consensus 37 ~lvq~eggpcavia~vqafllk~ilm~~e~~~~s~~~g~~~~el~~h~lsd~~~s~~~~~~~~~~Lv~lL~g~tte~~AS 116 (449)
T KOG2871|consen 37 ALVQPEGGPCAVIAPVQAFLLKAILMRAEWLQTSFCSGAPKEELLYHLLSDILASRLCSVVQGYVLVYLLRGRTTEEVAS 116 (449)
T ss_pred cccccCCCceeeehhHHHHHHHHHhcCccccccccccCchHHHHHHHhhhhHhHhhhhhhccceEEEEeeccCchhhhhh
Confidence 7999999999999999999 99999 78899999999998 4434344333 20
Q ss_pred ------------cC-----Ccccc-------ccccceeEEEEcccCCHHHHHHHHHHhchhhcCCchhHHHHHHHHHhcc
Q 015398 52 ------------LE-----GLSIE-------SGSDMQKVIRVDAYTSQATALQKLEEALPVFRSRMGAMLFLISALLSRG 107 (407)
Q Consensus 52 ------------~~-----~~~~~-------~~~~~~e~l~~~~~~s~~~l~~~l~~~i~~f~~~~GvllFLySvILSRG 107 (407)
.| .+.+. +++.||++++...|++...+.+.+...+..|++.+||+|||||++||||
T Consensus 117 lt~~~~~SS~q~eeA~~s~~L~ie~~~~~~ls~~~~~~~l~~~~f~~~a~~~~~~~~~~~~~~~t~GvLLFLySalLTrg 196 (449)
T KOG2871|consen 117 LTGPLAASSDQVEEALFSAALEIERTISDKLSVTMFHPSLDEVFFDHSACYFHDSVTEYFTEEETPGVLLFLYSALLTRG 196 (449)
T ss_pred ccCccccchHHHHHHHHhcchhhhhhhhcccCHHHHhHhhhheeccchHHHHHHHHHHHHhhhcccchHHHHHHHHHhhh
Confidence 00 11122 3467888999999999999999999999999999999999999999999
Q ss_pred hhHHhhcCCCCCCCcccCCCCcchHHhhhhhhcCcccccccCCceecCCceeeeccccCcceeeeeecccCCccccccCC
Q 015398 108 LDYVQADRDDPTPSLVTAPFGHASQEIVNLLLCGQAVPNVFDGRMDLGGGMCLKGISTSVEVGFLTLLESLNFCKVGQHL 187 (407)
Q Consensus 108 ie~V~~dmd~p~~~Li~~~~G~csQeLVNLLLTGrAvsnVfdg~~~~gg~~~l~Gi~~rs~iGfLt~~E~~~~~~VGs~l 187 (407)
+++||+|+||++.|||+++|||+||+|||||||||||||||||++|+|| |+|+||+++++|||||++|.+|||+||+++
T Consensus 197 le~V~aDiddas~plits~~g~gsq~iVnLLLtGrAvpnV~dg~~dvgg-m~l~gI~e~~dvgfltlle~l~~ckvgs~l 275 (449)
T KOG2871|consen 197 LEKVRADIDDASEPLITSSYGHGSQSIVNLLLTGRAVPNVWDGVVDVGG-MKLYGIPEQGDVGFLTLLELLRYCKVGSAL 275 (449)
T ss_pred HHHhhhccccCCCCcccCCCCcchHHHHHHHHccccccccccCccccCc-ceeeccccccchhHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999998 999999999999999999999999999999
Q ss_pred CCCCCceEEEeeCCceEEEEecCcCccccchHHHHHHHHHHHHHhcCCCCCCcceehhhHHHHHHHhc-CCCCHHHHhcc
Q 015398 188 KCPKWPIWVVGSESHYTVLFALDTSVQDENELEERESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTN-IRLPREKLDHL 266 (407)
Q Consensus 188 K~P~~PIWv~~s~~hysVLF~~~~~l~~~~~~~~~~~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lg-l~l~~eel~~m 266 (407)
|+|++||||++|++||||||++|+.++.+.. .++++||+|+.+|++ |||||+++.|++||.++| ....++++..|
T Consensus 276 k~pr~Piwv~gSeth~tvlfs~d~~l~~~~~---~s~q~rR~f~a~d~~-d~nfis~s~~~~vm~~~N~~vse~a~v~l~ 351 (449)
T KOG2871|consen 276 KQPRQPIWVLGSETHLTVLFSCDGHLVVPEN---PSEQLRRNFHAYDPE-DNNFISCSGLQIVMTALNRLVSEPAYVMLM 351 (449)
T ss_pred cCCCCceeEecCCCceEEEEecCccccCCCC---CCHHHHhhhhccCcc-CCCeeecHHHHHHHHHhcccccCHHHHHHh
Confidence 9999999999999999999999999998832 247899999999999 799999999999999999 56778889888
Q ss_pred ------cCCCceehHHHHHHHhhhccccCCCCCccccCccceeEEEeeCCcccccCCCCeeeccCCCccccccccccccc
Q 015398 267 ------CGSGFIVWSEFWQVILDLDKSLGGLKDSTGLMGKKVFDLYHFNGIAKSDLNGGQVSSSGGDTPLQRPRLTKLRV 340 (407)
Q Consensus 267 ------dg~GiIl~~eF~~~~l~~e~s~~~~~~~~~~~~~~~F~lyhYNG~~~s~~~~~~~~~~g~~~~~~~~~~~~~~v 340 (407)
++.|||+.++|+.+|||.+-+ ++|++|++|||||+.+||.|||+||++||++..
T Consensus 352 ~~~l~pE~~~iil~~d~lg~~~p~tgs----------~g~~~f~~~h~nGi~gsn~ggka~~veGg~~l~---------- 411 (449)
T KOG2871|consen 352 RQPLDPESLGIILLEDFLGEFFPTTGS----------SGPGAFAGYHYNGISGSNVGGKAMYVEGGAALP---------- 411 (449)
T ss_pred cCccChhhcceEEeccccccccCcccc----------CCCcceeeeeccCccCCCCCCceEEeecccccC----------
Confidence 899999999999999998875 589999999999999999999999999988554
Q ss_pred cCCCCCChhhhhhhhhcccCCCCCCCCCCcccCCCCCCCCCChhhhhhhhcCCceEeeecCC-CCCCC
Q 015398 341 SVPPRWTPEEFMADVAVSSASGGNESSGKETEAAKPEPPQHAPLVDCIRTRWARAVCNWIGD-PPSIV 407 (407)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~cl~tkW~~~~~~W~~~-~Psi~ 407 (407)
+ . +.+.+-+..+||++|||||||+|+|+|+.+ .|||+
T Consensus 412 ---~-~--------------------------~~k~~st~NtPlvrcirTKW~~a~iswh~g~~psL~ 449 (449)
T KOG2871|consen 412 ---D-V--------------------------VAKEESTLNTPLVRCIRTKWPEAEISWHVGMLPSLN 449 (449)
T ss_pred ---C-c--------------------------cchhhhcccchHHHHHhccCCceeEEeecCCCccCC
Confidence 1 1 012223566799999999999999999955 79985
No 2
>PF13898 DUF4205: Domain of unknown function (DUF4205)
Probab=100.00 E-value=8.9e-85 Score=651.87 Aligned_cols=216 Identities=48% Similarity=0.819 Sum_probs=205.2
Q ss_pred CceeccCCCchhhHHHHHHH-HHHHH---------------------HHHHHHHHHHHHHhccCCCceEEEeecCCcc--
Q 015398 1 MGLVQHEGGPCGVLAAIQVI-LQFLI---------------------LVALVKSMGEILFSCGSNKRAVLAKALEGLS-- 56 (407)
Q Consensus 1 ygLvQ~~GGPCgVlA~VQA~-LK~lL---------------------~~~L~~Ala~IL~~a~~~~~~~v~l~~~~~~-- 56 (407)
|||||++||||||||||||| ||||| ++||++|||+|||+|+++++++||++.++..
T Consensus 32 ~gLvQ~~GGPCgVlA~VQA~iLK~LLF~~~~~~~~~~~~~~~s~~~q~~aLv~ALa~ILw~ag~~~~a~V~L~~~~~~~~ 111 (342)
T PF13898_consen 32 YGLVQHKGGPCGVLAAVQAFILKYLLFERKGSDVNSSSLLQPSEEEQTEALVQALADILWQAGENKKAVVCLPSEDSQFS 111 (342)
T ss_pred eEEEecCCCCchhHHHHHHHHHHHHhcCCCccccccccccCCCHHHHHHHHHHHHHHHHHhhccCCceEEEeeccccccc
Confidence 89999999999999999999 99999 6899999999999999999999999876443
Q ss_pred ---ccccccceeEEEEcccCCHHHHHHHHHHhchhhc--CCchhHHHHHHHHHhcchhHHhhcCCCCCCCcccCCCCcch
Q 015398 57 ---IESGSDMQKVIRVDAYTSQATALQKLEEALPVFR--SRMGAMLFLISALLSRGLDYVQADRDDPTPSLVTAPFGHAS 131 (407)
Q Consensus 57 ---~~~~~~~~e~l~~~~~~s~~~l~~~l~~~i~~f~--~~~GvllFLySvILSRGie~V~~dmd~p~~~Li~~~~G~cs 131 (407)
..+.++|+|++++++|++++++++||++||++|+ +++||+|||||+|||||+++|++|||+|++|||++ |||||
T Consensus 112 ~s~~~~~d~f~e~L~l~~~~s~e~l~~fl~~~i~~f~~~~~~GvllflyS~ilsrg~~~v~~d~d~~~~~Li~~-~g~~s 190 (342)
T PF13898_consen 112 PSGDYSADGFTERLQLFEFTSIEDLEQFLRRHIPQFQEEGPSGVLLFLYSVILSRGIERVRSDMDDPTTPLIGP-HGHCS 190 (342)
T ss_pred cccccchhceeeeeeEEecCCHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHhccHHHHHHHhCCCCCceeCc-CCchh
Confidence 2346789999999999999999999999999999 67999999999999999999999999999999998 99999
Q ss_pred HHhhhhhhcCcccccccCCceecCCceeeeccccCcceeeeeecccCCccccccCCCCCCCceEEEeeCCceEEEEecCc
Q 015398 132 QEIVNLLLCGQAVPNVFDGRMDLGGGMCLKGISTSVEVGFLTLLESLNFCKVGQHLKCPKWPIWVVGSESHYTVLFALDT 211 (407)
Q Consensus 132 QeLVNLLLTGrAvsnVfdg~~~~gg~~~l~Gi~~rs~iGfLt~~E~~~~~~VGs~lK~P~~PIWv~~s~~hysVLF~~~~ 211 (407)
||||||||||||+||||||+.+.+++++||||.+|++|||||++|+++||+||++||||++||||++||+||||||++|+
T Consensus 191 q~lvnLlLtG~A~~~v~dg~~~~~~~~~l~Gi~~~~~iG~Lt~~e~~~~~~vG~~lK~P~~PiWv~~~~~h~svlF~~~~ 270 (342)
T PF13898_consen 191 QELVNLLLTGRAVSNVFDGVDDGNGGLTLKGISSRSDIGFLTLFEHYRYCQVGSFLKTPKFPIWVVCSESHYSVLFSLNR 270 (342)
T ss_pred hhhhheeEcCcccCcccCCccccCCCeEEeccccCCceeEEEehhhhcCCCcCCCCCCCCCCEEEEEeCCceEEEEeCCH
Confidence 99999999999999999999999777999999999999999999999999999999999999999999999999999998
Q ss_pred Cccccc
Q 015398 212 SVQDEN 217 (407)
Q Consensus 212 ~l~~~~ 217 (407)
++++++
T Consensus 271 ~l~~~~ 276 (342)
T PF13898_consen 271 RLLSDW 276 (342)
T ss_pred HHhhhh
Confidence 876664
No 3
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.07 E-value=1.1e-10 Score=103.83 Aligned_cols=91 Identities=26% Similarity=0.357 Sum_probs=75.4
Q ss_pred HHHHHHHHHhcCCCCCCcceehhhHHHHHHHhcCCCCHHHHhcc------cCCCceehHHHHHHHhhhccccCCCCCccc
Q 015398 223 ESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHL------CGSGFIVWSEFWQVILDLDKSLGGLKDSTG 296 (407)
Q Consensus 223 ~~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~l~~eel~~m------dg~GiIl~~eF~~~~l~~e~s~~~~~~~~~ 296 (407)
..+++++|+.||++ ++|+|+.++|+.+|+.||...+++++..| +++|.|+|+||+.++........... ...
T Consensus 7 ~~el~~~F~~fD~d-~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~-~~~ 84 (151)
T KOG0027|consen 7 ILELKEAFQLFDKD-GDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEE-ASS 84 (151)
T ss_pred HHHHHHHHHHHCCC-CCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhccccccc-ccH
Confidence 46899999999999 79999999999999999999999999887 78999999999999876555321100 122
Q ss_pred cCccceeEEEeeCCccccc
Q 015398 297 LMGKKVFDLYHFNGIAKSD 315 (407)
Q Consensus 297 ~~~~~~F~lyhYNG~~~s~ 315 (407)
.+.+++|++||.||.++-.
T Consensus 85 ~el~eaF~~fD~d~~G~Is 103 (151)
T KOG0027|consen 85 EELKEAFRVFDKDGDGFIS 103 (151)
T ss_pred HHHHHHHHHHccCCCCcCc
Confidence 3678999999999999733
No 4
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=98.86 E-value=4.4e-09 Score=87.45 Aligned_cols=68 Identities=24% Similarity=0.393 Sum_probs=59.6
Q ss_pred hHHHHHHHHHHHHHhcCC-CCCCcceehhhHHHHHHH-hcCCCCH-HHHhcc------cCCCceehHHHHHHHhhhcc
Q 015398 218 ELEERESHIRKAFDAQDK-SGGGGFISVEGFQQVIRD-TNIRLPR-EKLDHL------CGSGFIVWSEFWQVILDLDK 286 (407)
Q Consensus 218 ~~~~~~~e~rraFd~fD~-~~gnGfIs~~~L~~vL~~-Lgl~l~~-eel~~m------dg~GiIl~~eF~~~~l~~e~ 286 (407)
+.|..-..++++|+.||+ + ++|+|+.++|+.+|+. ||..+++ +++++| +++|.|+|+||+.++...-.
T Consensus 2 ~lE~ai~~l~~~F~~fd~~~-~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l~~ 78 (89)
T cd05022 2 ELEKAIETLVSNFHKASVKG-GKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGELAK 78 (89)
T ss_pred hHHHHHHHHHHHHHHHhCCC-CCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHH
Confidence 346666789999999999 7 7999999999999999 9988888 889887 89999999999999765433
No 5
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=98.84 E-value=5.2e-09 Score=93.14 Aligned_cols=59 Identities=27% Similarity=0.527 Sum_probs=55.6
Q ss_pred HHHHHHHHhcCCCCCCcceehhhHHHHHHHhcCCCCHHHHhcc------cCCCceehHHHHHHHhh
Q 015398 224 SHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHL------CGSGFIVWSEFWQVILD 283 (407)
Q Consensus 224 ~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~l~~eel~~m------dg~GiIl~~eF~~~~l~ 283 (407)
+++++||+.||++ |+||||.++|+.+|..||.+.++++++.| +++|.|+|++|.++|..
T Consensus 85 ~el~eaF~~fD~d-~~G~Is~~el~~~l~~lg~~~~~~e~~~mi~~~d~d~dg~i~f~ef~~~m~~ 149 (151)
T KOG0027|consen 85 EELKEAFRVFDKD-GDGFISASELKKVLTSLGEKLTDEECKEMIREVDVDGDGKVNFEEFVKMMSG 149 (151)
T ss_pred HHHHHHHHHHccC-CCCcCcHHHHHHHHHHhCCcCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHhc
Confidence 5899999999999 79999999999999999999999999998 79999999999998853
No 6
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=98.72 E-value=2.2e-08 Score=91.79 Aligned_cols=59 Identities=34% Similarity=0.590 Sum_probs=55.7
Q ss_pred HHHHHHHHhcCCCCCCcceehhhHHHHHHHhcCCCCHHHHhcc------cCCCceehHHHHHHHhh
Q 015398 224 SHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHL------CGSGFIVWSEFWQVILD 283 (407)
Q Consensus 224 ~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~l~~eel~~m------dg~GiIl~~eF~~~~l~ 283 (407)
+++++||+.||.+ ++|+|+..+|..||+.||.++++++++.| +++|.|+|++|.+.++.
T Consensus 92 Eel~~aF~~fD~d-~dG~Is~~eL~~vl~~lge~~~deev~~ll~~~d~d~dG~i~~~eF~~~~~~ 156 (160)
T COG5126 92 EELREAFKLFDKD-HDGYISIGELRRVLKSLGERLSDEEVEKLLKEYDEDGDGEIDYEEFKKLIKD 156 (160)
T ss_pred HHHHHHHHHhCCC-CCceecHHHHHHHHHhhcccCCHHHHHHHHHhcCCCCCceEeHHHHHHHHhc
Confidence 6899999999999 79999999999999999999999999998 79999999999988764
No 7
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.69 E-value=4.8e-08 Score=80.79 Aligned_cols=64 Identities=17% Similarity=0.261 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHHhcC-CCCCCc-ceehhhHHHHHHH-----hcCCCCHHHHhcc------cCCCceehHHHHHHHhh
Q 015398 219 LEERESHIRKAFDAQD-KSGGGG-FISVEGFQQVIRD-----TNIRLPREKLDHL------CGSGFIVWSEFWQVILD 283 (407)
Q Consensus 219 ~~~~~~e~rraFd~fD-~~~gnG-fIs~~~L~~vL~~-----Lgl~l~~eel~~m------dg~GiIl~~eF~~~~l~ 283 (407)
.|..-..++++|+.|| ++ |+| +|+.++|+.+|++ +|...+++++++| +++|.|+|+||+..+..
T Consensus 3 le~~~~~l~~aF~~fD~~d-gdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~ 79 (88)
T cd05027 3 LEKAMVALIDVFHQYSGRE-GDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAM 79 (88)
T ss_pred HHHHHHHHHHHHHHhcccC-CCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 4556678999999998 67 799 5999999999999 9999999999887 78999999999988654
No 8
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=98.68 E-value=4.5e-08 Score=74.76 Aligned_cols=56 Identities=29% Similarity=0.577 Sum_probs=49.6
Q ss_pred HHHHHHHhcCCCCCCcceehhhHHHHHHHhcCCCCHHHHhcc----------cCCCceehHHHHHHH
Q 015398 225 HIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHL----------CGSGFIVWSEFWQVI 281 (407)
Q Consensus 225 e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~l~~eel~~m----------dg~GiIl~~eF~~~~ 281 (407)
+++++|+.||.+ ++|+|+.++|..+++.++...++++++++ +++|.|.|+||+++|
T Consensus 1 ~l~~~F~~~D~d-~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 1 RLKEAFKKFDKD-GDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHSTT-SSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred CHHHHHHHHcCC-ccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 478999999999 79999999999999999988877665544 899999999999875
No 9
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=98.66 E-value=1.7e-08 Score=92.56 Aligned_cols=84 Identities=17% Similarity=0.291 Sum_probs=71.2
Q ss_pred HHHHHHHHhcCCCCCCcceehhhHHHHHHHhcCCCCHHHHhcc-----cCCCceehHHHHHHHhhhccccCCCCCccccC
Q 015398 224 SHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHL-----CGSGFIVWSEFWQVILDLDKSLGGLKDSTGLM 298 (407)
Q Consensus 224 ~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~l~~eel~~m-----dg~GiIl~~eF~~~~l~~e~s~~~~~~~~~~~ 298 (407)
+++++||.+||++ ++|+|+.++|..+|++||...+..++.+| .|.|.|+|.+|+.++-..-+.. ....+
T Consensus 20 ~~lkeaF~l~D~d-~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~~~~~idf~~Fl~~ms~~~~~~-----~~~Ee 93 (160)
T COG5126 20 QELKEAFQLFDRD-SDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDAGNETVDFPEFLTVMSVKLKRG-----DKEEE 93 (160)
T ss_pred HHHHHHHHHhCcC-CCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccCCCCccCHHHHHHHHHHHhccC-----CcHHH
Confidence 6899999999999 79999999999999999999999999888 2459999999999975433321 11246
Q ss_pred ccceeEEEeeCCccc
Q 015398 299 GKKVFDLYHFNGIAK 313 (407)
Q Consensus 299 ~~~~F~lyhYNG~~~ 313 (407)
...+|++||.|+.++
T Consensus 94 l~~aF~~fD~d~dG~ 108 (160)
T COG5126 94 LREAFKLFDKDHDGY 108 (160)
T ss_pred HHHHHHHhCCCCCce
Confidence 788999999999997
No 10
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.54 E-value=2.2e-07 Score=76.43 Aligned_cols=66 Identities=21% Similarity=0.413 Sum_probs=55.3
Q ss_pred hHHHHHHHHHHHHHhcC-CCCCCcc-eehhhHHHHHHH-hcC----CCCHHHHhcc------cCCCceehHHHHHHHhhh
Q 015398 218 ELEERESHIRKAFDAQD-KSGGGGF-ISVEGFQQVIRD-TNI----RLPREKLDHL------CGSGFIVWSEFWQVILDL 284 (407)
Q Consensus 218 ~~~~~~~e~rraFd~fD-~~~gnGf-Is~~~L~~vL~~-Lgl----~l~~eel~~m------dg~GiIl~~eF~~~~l~~ 284 (407)
..|...++++++|+.|| .+ ++|+ |+.++|+.+|++ +|. ..++++++.| +++|.|+|++|+..+...
T Consensus 3 ~~e~~~~~l~~~F~~fDd~d-g~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~ 81 (92)
T cd05025 3 ELETAMETLINVFHAHSGKE-GDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL 81 (92)
T ss_pred hHHHHHHHHHHHHHHHhccc-CCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 45677789999999997 98 7995 999999999986 765 3577888877 789999999999887643
No 11
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.49 E-value=3.3e-07 Score=76.21 Aligned_cols=67 Identities=15% Similarity=0.236 Sum_probs=54.6
Q ss_pred chHHHHHHHHHHHHHhcC-CCCCCc-ceehhhHHHHHHH-hc----CCCCHHHHhcc------cCCCceehHHHHHHHhh
Q 015398 217 NELEERESHIRKAFDAQD-KSGGGG-FISVEGFQQVIRD-TN----IRLPREKLDHL------CGSGFIVWSEFWQVILD 283 (407)
Q Consensus 217 ~~~~~~~~e~rraFd~fD-~~~gnG-fIs~~~L~~vL~~-Lg----l~l~~eel~~m------dg~GiIl~~eF~~~~l~ 283 (407)
++.|..-..++++|+.|| ++ |+| +|+.++|+++|+. ++ ...+++++++| +++|.|+|+||+.++..
T Consensus 3 ~~le~a~~~~~~~F~~~dd~d-gdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~ 81 (93)
T cd05026 3 TQLEGAMDTLIRIFHNYSGKE-GDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAA 81 (93)
T ss_pred cHHHHHHHHHHHHHHHHHccC-CCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 456777789999999999 66 688 5999999999977 43 34466778776 78999999999999765
Q ss_pred h
Q 015398 284 L 284 (407)
Q Consensus 284 ~ 284 (407)
.
T Consensus 82 l 82 (93)
T cd05026 82 L 82 (93)
T ss_pred H
Confidence 4
No 12
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.46 E-value=4.2e-07 Score=75.08 Aligned_cols=64 Identities=14% Similarity=0.239 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHhcCC-CCCCcceehhhHHHHHHH-----hcCCCCHHHHhcc------cCCCceehHHHHHHHh
Q 015398 219 LEERESHIRKAFDAQDK-SGGGGFISVEGFQQVIRD-----TNIRLPREKLDHL------CGSGFIVWSEFWQVIL 282 (407)
Q Consensus 219 ~~~~~~e~rraFd~fD~-~~gnGfIs~~~L~~vL~~-----Lgl~l~~eel~~m------dg~GiIl~~eF~~~~l 282 (407)
.+....+++++|+.||. ++++|+|+.++|+.+|++ +|...++++++.| +++|.|+|+||++.+.
T Consensus 3 ~~~~~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~ 78 (94)
T cd05031 3 LEHAMESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVA 78 (94)
T ss_pred HHHHHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 45566789999999997 732699999999999997 6788899998887 7899999999998864
No 13
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.39 E-value=8.4e-07 Score=73.42 Aligned_cols=67 Identities=13% Similarity=0.230 Sum_probs=56.5
Q ss_pred hHHHHHHHHHHHHHhcCC-CCCCcceehhhHHHHHH---HhcCCCCHHHHhcc------cCCCceehHHHHHHHhhh
Q 015398 218 ELEERESHIRKAFDAQDK-SGGGGFISVEGFQQVIR---DTNIRLPREKLDHL------CGSGFIVWSEFWQVILDL 284 (407)
Q Consensus 218 ~~~~~~~e~rraFd~fD~-~~gnGfIs~~~L~~vL~---~Lgl~l~~eel~~m------dg~GiIl~~eF~~~~l~~ 284 (407)
+.|..-..+-..|+.||. ++++|+|+.++|+++|+ .+|.+++++++++| +++|.|+|+||++.+...
T Consensus 4 ~~e~~~~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l 80 (88)
T cd05029 4 PLDQAIGLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGAL 80 (88)
T ss_pred HHHHHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence 455556678888999998 53389999999999997 47999999999987 789999999999887643
No 14
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.26 E-value=1.9e-06 Score=69.83 Aligned_cols=66 Identities=18% Similarity=0.224 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHhcCC--CCCCcceehhhHHHHHHH-hcCCC----CHHHHhcc------cCCCceehHHHHHHHhhhcc
Q 015398 220 EERESHIRKAFDAQDK--SGGGGFISVEGFQQVIRD-TNIRL----PREKLDHL------CGSGFIVWSEFWQVILDLDK 286 (407)
Q Consensus 220 ~~~~~e~rraFd~fD~--~~gnGfIs~~~L~~vL~~-Lgl~l----~~eel~~m------dg~GiIl~~eF~~~~l~~e~ 286 (407)
+...+.++++|+.||. + ++|+|+.++|..+|++ +|..+ ++++++.| +++|.|+|++|++++....+
T Consensus 4 ~~~~~~l~~~F~~~D~~~~-~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~~~ 82 (88)
T cd00213 4 EKAIETIIDVFHKYSGKEG-DKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGKLAV 82 (88)
T ss_pred HHHHHHHHHHHHHHhhccC-CCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHH
Confidence 3444679999999999 6 7999999999999987 67654 47888887 67899999999999876544
No 15
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.22 E-value=4.2e-06 Score=69.31 Aligned_cols=64 Identities=17% Similarity=0.268 Sum_probs=54.9
Q ss_pred HHHHHHHHHHhcCCCCCCcceehhhHHHHHHHhcCCCCHHHHhcc------cCCCceehHHHHHHHhhhcccc
Q 015398 222 RESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHL------CGSGFIVWSEFWQVILDLDKSL 288 (407)
Q Consensus 222 ~~~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~l~~eel~~m------dg~GiIl~~eF~~~~l~~e~s~ 288 (407)
...+++++|+.||.+ ++|+|+.++|+++|+.+| +++++++.| +++|.|+|+||+..+....+-.
T Consensus 8 ~~~~l~~~F~~~D~d-~~G~Is~~el~~~l~~~~--~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~~~~~ 77 (96)
T smart00027 8 DKAKYEQIFRSLDKN-QDGTVTGAQAKPILLKSG--LPQTLLAKIWNLADIDNDGELDKDEFALAMHLIYRKL 77 (96)
T ss_pred HHHHHHHHHHHhCCC-CCCeEeHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHHH
Confidence 346899999999999 799999999999999976 578888887 6799999999999877665543
No 16
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=98.22 E-value=9.1e-07 Score=81.20 Aligned_cols=93 Identities=28% Similarity=0.352 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHHhcCCCCCCcceehhhHHHHHHHhcCCCCHHHHhcc------cCCCceehHHHHHHHhhhccccCCCCC
Q 015398 220 EERESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHL------CGSGFIVWSEFWQVILDLDKSLGGLKD 293 (407)
Q Consensus 220 ~~~~~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~l~~eel~~m------dg~GiIl~~eF~~~~l~~e~s~~~~~~ 293 (407)
+...++++.+|+.||++ +.|+|.+++|...|++||..+..++++.| +|+|-|.|++|..++-..-- .+|
T Consensus 29 ~~q~q~i~e~f~lfd~~-~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~----e~d 103 (172)
T KOG0028|consen 29 EEQKQEIKEAFELFDPD-MAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLG----ERD 103 (172)
T ss_pred HHHHhhHHHHHHhhccC-CCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHh----ccC
Confidence 44557899999999999 79999999999999999999999998777 78999999999998542111 122
Q ss_pred ccccCccceeEEEeeCCcccccCCC
Q 015398 294 STGLMGKKVFDLYHFNGIAKSDLNG 318 (407)
Q Consensus 294 ~~~~~~~~~F~lyhYNG~~~s~~~~ 318 (407)
+-.+.+++|+++|.++.|+-|.++
T Consensus 104 -t~eEi~~afrl~D~D~~Gkis~~~ 127 (172)
T KOG0028|consen 104 -TKEEIKKAFRLFDDDKTGKISQRN 127 (172)
T ss_pred -cHHHHHHHHHcccccCCCCcCHHH
Confidence 225688899999999999755433
No 17
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.20 E-value=2.6e-06 Score=64.34 Aligned_cols=53 Identities=23% Similarity=0.365 Sum_probs=47.0
Q ss_pred HHHHHhcCCCCCCcceehhhHHHHHHHhcCCCCHHHHhcc------cCCCceehHHHHHHHh
Q 015398 227 RKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHL------CGSGFIVWSEFWQVIL 282 (407)
Q Consensus 227 rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~l~~eel~~m------dg~GiIl~~eF~~~~l 282 (407)
+++|+.+|.+ ++|+|+.++|..+|+++|. ++++++.| +++|.|+|+||...+.
T Consensus 2 ~~~F~~~D~~-~~G~i~~~el~~~l~~~g~--~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~ 60 (67)
T cd00052 2 DQIFRSLDPD-GDGLISGDEARPFLGKSGL--PRSVLAQIWDLADTDKDGKLDKEEFAIAMH 60 (67)
T ss_pred hHHHHHhCCC-CCCcCcHHHHHHHHHHcCC--CHHHHHHHHHHhcCCCCCcCCHHHHHHHHH
Confidence 6789999999 7999999999999999986 77778776 6789999999988764
No 18
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=98.19 E-value=2.4e-06 Score=76.99 Aligned_cols=59 Identities=22% Similarity=0.384 Sum_probs=53.8
Q ss_pred HHHHHHHHhcCCCCCCcceehhhHHHHHHHhcCCCCHHHHhcc-----cCCCceehHHHHHHHhh
Q 015398 224 SHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHL-----CGSGFIVWSEFWQVILD 283 (407)
Q Consensus 224 ~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~l~~eel~~m-----dg~GiIl~~eF~~~~l~ 283 (407)
+..-+-.+.||++ |||+|+..+|+.||-.||.+++++|++.+ |+.|-|+|+.|.+.++.
T Consensus 88 edfvegLrvFDke-g~G~i~~aeLRhvLttlGekl~eeEVe~Llag~eD~nG~i~YE~fVk~i~~ 151 (152)
T KOG0030|consen 88 EDFVEGLRVFDKE-GNGTIMGAELRHVLTTLGEKLTEEEVEELLAGQEDSNGCINYEAFVKHIMS 151 (152)
T ss_pred HHHHHHHHhhccc-CCcceeHHHHHHHHHHHHhhccHHHHHHHHccccccCCcCcHHHHHHHHhc
Confidence 4567778999999 79999999999999999999999999987 88999999999988763
No 19
>PTZ00183 centrin; Provisional
Probab=98.12 E-value=3.2e-06 Score=73.47 Aligned_cols=88 Identities=24% Similarity=0.349 Sum_probs=69.4
Q ss_pred HHHHHHHHHHhcCCCCCCcceehhhHHHHHHHhcCCCCHHHHhcc------cCCCceehHHHHHHHhhhccccCCCCCcc
Q 015398 222 RESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHL------CGSGFIVWSEFWQVILDLDKSLGGLKDST 295 (407)
Q Consensus 222 ~~~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~l~~eel~~m------dg~GiIl~~eF~~~~l~~e~s~~~~~~~~ 295 (407)
...+++++|+.+|.+ ++|+|+.++|..+|+.+|..++.++++.+ +++|.|+|+||+..+....... ..
T Consensus 15 ~~~~~~~~F~~~D~~-~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~-----~~ 88 (158)
T PTZ00183 15 QKKEIREAFDLFDTD-GSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGER-----DP 88 (158)
T ss_pred HHHHHHHHHHHhCCC-CCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCC-----Cc
Confidence 346899999999999 79999999999999999998888888776 7899999999998765322111 11
Q ss_pred ccCccceeEEEeeCCccccc
Q 015398 296 GLMGKKVFDLYHFNGIAKSD 315 (407)
Q Consensus 296 ~~~~~~~F~lyhYNG~~~s~ 315 (407)
....+..|..|+-||.++-+
T Consensus 89 ~~~l~~~F~~~D~~~~G~i~ 108 (158)
T PTZ00183 89 REEILKAFRLFDDDKTGKIS 108 (158)
T ss_pred HHHHHHHHHHhCCCCCCcCc
Confidence 12456789999999887633
No 20
>PTZ00184 calmodulin; Provisional
Probab=98.10 E-value=3.7e-06 Score=71.95 Aligned_cols=85 Identities=22% Similarity=0.344 Sum_probs=67.9
Q ss_pred HHHHHHHHHhcCCCCCCcceehhhHHHHHHHhcCCCCHHHHhcc------cCCCceehHHHHHHHhhhccccCCCCCccc
Q 015398 223 ESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHL------CGSGFIVWSEFWQVILDLDKSLGGLKDSTG 296 (407)
Q Consensus 223 ~~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~l~~eel~~m------dg~GiIl~~eF~~~~l~~e~s~~~~~~~~~ 296 (407)
.+++++.|+.+|.+ ++|.|+.++|..+|..++..++++++..| +++|.|+|++|+..+....... ...
T Consensus 10 ~~~~~~~F~~~D~~-~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~-----~~~ 83 (149)
T PTZ00184 10 IAEFKEAFSLFDKD-GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDT-----DSE 83 (149)
T ss_pred HHHHHHHHHHHcCC-CCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCC-----cHH
Confidence 36799999999999 79999999999999999999888887776 6899999999998865432210 111
Q ss_pred cCccceeEEEeeCCccc
Q 015398 297 LMGKKVFDLYHFNGIAK 313 (407)
Q Consensus 297 ~~~~~~F~lyhYNG~~~ 313 (407)
...+..|..|+.||.++
T Consensus 84 ~~~~~~F~~~D~~~~g~ 100 (149)
T PTZ00184 84 EEIKEAFKVFDRDGNGF 100 (149)
T ss_pred HHHHHHHHhhCCCCCCe
Confidence 23567999999998876
No 21
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=98.04 E-value=4e-06 Score=76.68 Aligned_cols=84 Identities=21% Similarity=0.350 Sum_probs=70.3
Q ss_pred HHHHHHHHhcCCCCCCcceehhhHHHHHHHhcCCCCHHHHhcc--cCCCceehHHHHHHHhhhccccCCCCCccccCccc
Q 015398 224 SHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHL--CGSGFIVWSEFWQVILDLDKSLGGLKDSTGLMGKK 301 (407)
Q Consensus 224 ~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~l~~eel~~m--dg~GiIl~~eF~~~~l~~e~s~~~~~~~~~~~~~~ 301 (407)
+++++||.+.|++ ++|||.-+.|++.+.+||-..++++|+.| ++.|-|.|.-|+.+|=.-=. + .||. .....
T Consensus 32 qEfKEAF~~mDqn-rDG~IdkeDL~d~~aSlGk~~~d~elDaM~~Ea~gPINft~FLTmfGekL~---g-tdpe-~~I~~ 105 (171)
T KOG0031|consen 32 QEFKEAFNLMDQN-RDGFIDKEDLRDMLASLGKIASDEELDAMMKEAPGPINFTVFLTMFGEKLN---G-TDPE-EVILN 105 (171)
T ss_pred HHHHHHHHHHhcc-CCCcccHHHHHHHHHHcCCCCCHHHHHHHHHhCCCCeeHHHHHHHHHHHhc---C-CCHH-HHHHH
Confidence 6899999999999 79999999999999999999999999999 99999999999998632111 1 1121 23456
Q ss_pred eeEEEeeCCccc
Q 015398 302 VFDLYHFNGIAK 313 (407)
Q Consensus 302 ~F~lyhYNG~~~ 313 (407)
+|..||-+|-++
T Consensus 106 AF~~FD~~~~G~ 117 (171)
T KOG0031|consen 106 AFKTFDDEGSGK 117 (171)
T ss_pred HHHhcCccCCCc
Confidence 999999999887
No 22
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=98.00 E-value=4.3e-06 Score=75.33 Aligned_cols=85 Identities=16% Similarity=0.163 Sum_probs=67.3
Q ss_pred HHHHHHHHhcCCCCCCcceehhhHHHHHHHhcCCCCHHHHhcc----c----CCCceehHHHHHHHhhhccccCCCCCcc
Q 015398 224 SHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHL----C----GSGFIVWSEFWQVILDLDKSLGGLKDST 295 (407)
Q Consensus 224 ~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~l~~eel~~m----d----g~GiIl~~eF~~~~l~~e~s~~~~~~~~ 295 (407)
++++++|..||.. |+|-|+..+.+++||+||.+.++.++..- + +.-.|+|++|+-++-+.-+.. +..
T Consensus 11 ~e~ke~F~lfD~~-gD~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vaknk----~q~ 85 (152)
T KOG0030|consen 11 EEFKEAFLLFDRT-GDGKISGSQVGDVLRALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKNK----DQG 85 (152)
T ss_pred HHHHHHHHHHhcc-CcccccHHHHHHHHHHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhcc----ccC
Confidence 7899999999999 79999999999999999999999887553 2 447899999988876655532 211
Q ss_pred -ccCccceeEEEeeCCccc
Q 015398 296 -GLMGKKVFDLYHFNGIAK 313 (407)
Q Consensus 296 -~~~~~~~F~lyhYNG~~~ 313 (407)
.+.--+.+++||+.|.+.
T Consensus 86 t~edfvegLrvFDkeg~G~ 104 (152)
T KOG0030|consen 86 TYEDFVEGLRVFDKEGNGT 104 (152)
T ss_pred cHHHHHHHHHhhcccCCcc
Confidence 122345789999999885
No 23
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=97.98 E-value=1.2e-05 Score=74.08 Aligned_cols=58 Identities=28% Similarity=0.410 Sum_probs=54.8
Q ss_pred HHHHHHHHHhcCCCCCCcceehhhHHHHHHHhcCCCCHHHHhcc------cCCCceehHHHHHHH
Q 015398 223 ESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHL------CGSGFIVWSEFWQVI 281 (407)
Q Consensus 223 ~~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~l~~eel~~m------dg~GiIl~~eF~~~~ 281 (407)
.++++++|+.||-+ ++|-|+...|..|+++||.+++++++.+| |++|-|.-+||+..|
T Consensus 105 ~eEi~~afrl~D~D-~~Gkis~~~lkrvakeLgenltD~El~eMIeEAd~d~dgevneeEF~~im 168 (172)
T KOG0028|consen 105 KEEIKKAFRLFDDD-KTGKISQRNLKRVAKELGENLTDEELMEMIEEADRDGDGEVNEEEFIRIM 168 (172)
T ss_pred HHHHHHHHHccccc-CCCCcCHHHHHHHHHHhCccccHHHHHHHHHHhcccccccccHHHHHHHH
Confidence 36899999999999 69999999999999999999999999998 899999999998776
No 24
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=97.88 E-value=4.6e-05 Score=63.25 Aligned_cols=68 Identities=21% Similarity=0.256 Sum_probs=54.1
Q ss_pred hHHHHHHHHHHHHHh-cCCCCCCcceehhhHHHHHHHh-----cCCCCHHHHhcc------cCCCceehHHHHHHHhhhc
Q 015398 218 ELEERESHIRKAFDA-QDKSGGGGFISVEGFQQVIRDT-----NIRLPREKLDHL------CGSGFIVWSEFWQVILDLD 285 (407)
Q Consensus 218 ~~~~~~~e~rraFd~-fD~~~gnGfIs~~~L~~vL~~L-----gl~l~~eel~~m------dg~GiIl~~eF~~~~l~~e 285 (407)
+.|.....+.++|+. +|+++.+++|+.++|+.+|... +-..+++++++| +++|.|+|+||++++...-
T Consensus 3 ~le~~i~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l~ 82 (89)
T cd05023 3 ETERCIESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGLA 82 (89)
T ss_pred hHHHHHHHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHH
Confidence 456666889999999 6677434599999999999885 445677778776 7899999999999876543
No 25
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=97.87 E-value=3.4e-05 Score=55.18 Aligned_cols=55 Identities=31% Similarity=0.575 Sum_probs=49.0
Q ss_pred HHHHHHhcCCCCCCcceehhhHHHHHHHhcCCCCHHHHhcc------cCCCceehHHHHHHH
Q 015398 226 IRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHL------CGSGFIVWSEFWQVI 281 (407)
Q Consensus 226 ~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~l~~eel~~m------dg~GiIl~~eF~~~~ 281 (407)
++++|+.+|.+ ++|.|+.+++..+++.++...+.+++..+ ++.|.|.+++|...+
T Consensus 2 ~~~~f~~~d~~-~~g~l~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKD-GDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCC-CCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 67899999999 69999999999999999999998887765 578999999998654
No 26
>PTZ00183 centrin; Provisional
Probab=97.87 E-value=3.1e-05 Score=67.29 Aligned_cols=58 Identities=28% Similarity=0.453 Sum_probs=52.8
Q ss_pred HHHHHHHHhcCCCCCCcceehhhHHHHHHHhcCCCCHHHHhcc------cCCCceehHHHHHHHh
Q 015398 224 SHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHL------CGSGFIVWSEFWQVIL 282 (407)
Q Consensus 224 ~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~l~~eel~~m------dg~GiIl~~eF~~~~l 282 (407)
++++++|+.+|.+ ++|+|+.+++..+|..+|..+++++++.| ++.|.|+|++|.+.+.
T Consensus 90 ~~l~~~F~~~D~~-~~G~i~~~e~~~~l~~~~~~l~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 153 (158)
T PTZ00183 90 EEILKAFRLFDDD-KTGKISLKNLKRVAKELGETITDEELQEMIDEADRNGDGEISEEEFYRIMK 153 (158)
T ss_pred HHHHHHHHHhCCC-CCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 4689999999999 79999999999999999999999999877 6889999999987763
No 27
>PF14658 EF-hand_9: EF-hand domain
Probab=97.85 E-value=3.1e-05 Score=61.61 Aligned_cols=56 Identities=25% Similarity=0.378 Sum_probs=48.8
Q ss_pred HHHHhcCCCCCCcceehhhHHHHHHHhcC-CCCHHHHhcc------cCC-CceehHHHHHHHhhh
Q 015398 228 KAFDAQDKSGGGGFISVEGFQQVIRDTNI-RLPREKLDHL------CGS-GFIVWSEFWQVILDL 284 (407)
Q Consensus 228 raFd~fD~~~gnGfIs~~~L~~vL~~Lgl-~l~~eel~~m------dg~-GiIl~~eF~~~~l~~ 284 (407)
.+|++||.+ ..|.|++..|..+|++++- ..++++|+.+ ++. |.|+|+.|+..|-.+
T Consensus 2 ~~F~~fD~~-~tG~V~v~~l~~~Lra~~~~~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~~w 65 (66)
T PF14658_consen 2 TAFDAFDTQ-KTGRVPVSDLITYLRAVTGRSPEESELQDLINELDPEGRDGSVNFDTFLAIMRDW 65 (66)
T ss_pred cchhhcCCc-CCceEeHHHHHHHHHHHcCCCCcHHHHHHHHHHhCCCCCCceEeHHHHHHHHHHh
Confidence 479999999 7999999999999999999 6777778776 565 999999999988543
No 28
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=97.84 E-value=3.3e-05 Score=57.03 Aligned_cols=44 Identities=32% Similarity=0.634 Sum_probs=41.1
Q ss_pred CcceehhhHHHHHHHhcCC-CCHHHHhcc------cCCCceehHHHHHHHh
Q 015398 239 GGFISVEGFQQVIRDTNIR-LPREKLDHL------CGSGFIVWSEFWQVIL 282 (407)
Q Consensus 239 nGfIs~~~L~~vL~~Lgl~-l~~eel~~m------dg~GiIl~~eF~~~~l 282 (407)
+|+|+.++|+.+|+.+|++ +++++++.| +++|.|+|+||++.+.
T Consensus 2 ~G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~ 52 (54)
T PF13833_consen 2 DGKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQ 52 (54)
T ss_dssp SSEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHH
T ss_pred cCEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Confidence 6999999999999999999 999999887 8999999999998874
No 29
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=97.82 E-value=4.3e-05 Score=62.92 Aligned_cols=66 Identities=17% Similarity=0.298 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHhcCCCC-CCcceehhhHHHHHH-HhcCCCC----HHHHhcc------cCCCceehHHHHHHHhhh
Q 015398 219 LEERESHIRKAFDAQDKSG-GGGFISVEGFQQVIR-DTNIRLP----REKLDHL------CGSGFIVWSEFWQVILDL 284 (407)
Q Consensus 219 ~~~~~~e~rraFd~fD~~~-gnGfIs~~~L~~vL~-~Lgl~l~----~eel~~m------dg~GiIl~~eF~~~~l~~ 284 (407)
.|..-..+.+.|..|+... .+|+|+.++|+.+|. .++..++ +++++.| +++|.|.|+||+..+.+.
T Consensus 3 ~e~~i~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~~ 80 (88)
T cd05030 3 LEKAIETIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIKV 80 (88)
T ss_pred HHHHHHHHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence 3455567889999999653 479999999999996 6777676 8888887 689999999999987654
No 30
>PTZ00184 calmodulin; Provisional
Probab=97.75 E-value=7e-05 Score=64.02 Aligned_cols=58 Identities=31% Similarity=0.634 Sum_probs=52.2
Q ss_pred HHHHHHHHhcCCCCCCcceehhhHHHHHHHhcCCCCHHHHhcc------cCCCceehHHHHHHHh
Q 015398 224 SHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHL------CGSGFIVWSEFWQVIL 282 (407)
Q Consensus 224 ~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~l~~eel~~m------dg~GiIl~~eF~~~~l 282 (407)
+.++.+|+.||.+ ++|+|+.+++..+|+.+|..+++++++.+ +++|.|.|+||...+.
T Consensus 84 ~~~~~~F~~~D~~-~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 147 (149)
T PTZ00184 84 EEIKEAFKVFDRD-GNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMM 147 (149)
T ss_pred HHHHHHHHhhCCC-CCCeEeHHHHHHHHHHHCCCCCHHHHHHHHHhcCCCCCCcCcHHHHHHHHh
Confidence 4678999999999 79999999999999999999999988876 7899999999987653
No 31
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=97.75 E-value=3.5e-05 Score=51.48 Aligned_cols=30 Identities=37% Similarity=0.728 Sum_probs=26.9
Q ss_pred HHHHHHHhcCCCCCCcceehhhHHHHHH-Hhc
Q 015398 225 HIRKAFDAQDKSGGGGFISVEGFQQVIR-DTN 255 (407)
Q Consensus 225 e~rraFd~fD~~~gnGfIs~~~L~~vL~-~Lg 255 (407)
+++++|+.||.+ ++|+|+.++|+++|+ +||
T Consensus 1 ~l~~~F~~~D~d-~dG~I~~~el~~~l~~~lG 31 (31)
T PF13405_consen 1 RLREAFKMFDKD-GDGFIDFEELRAILRKSLG 31 (31)
T ss_dssp HHHHHHHHH-TT-SSSEEEHHHHHHHHHHHTT
T ss_pred CHHHHHHHHCCC-CCCcCcHHHHHHHHHHhcC
Confidence 478999999999 799999999999999 786
No 32
>PLN02964 phosphatidylserine decarboxylase
Probab=97.61 E-value=5e-05 Score=82.99 Aligned_cols=81 Identities=15% Similarity=0.176 Sum_probs=64.5
Q ss_pred HHHHHHHHhcCCCCCCcceehhhHHHHHHHhc-CCCCHHH---Hhcc------cCCCceehHHHHHHHhhhccccCCCCC
Q 015398 224 SHIRKAFDAQDKSGGGGFISVEGFQQVIRDTN-IRLPREK---LDHL------CGSGFIVWSEFWQVILDLDKSLGGLKD 293 (407)
Q Consensus 224 ~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lg-l~l~~ee---l~~m------dg~GiIl~~eF~~~~l~~e~s~~~~~~ 293 (407)
++++++|+.||++ ++|+| |+.+|+++| ...++++ +++| +++|.|+|+||++++-.... .
T Consensus 143 ~elkeaF~lfD~d-gdG~i----Lg~ilrslG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg~------~ 211 (644)
T PLN02964 143 ESACESFDLLDPS-SSNKV----VGSIFVSCSIEDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFGN------L 211 (644)
T ss_pred HHHHHHHHHHCCC-CCCcC----HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcc------C
Confidence 6789999999999 79997 999999999 5777776 5555 78999999999998764321 1
Q ss_pred ccccCccceeEEEeeCCccccc
Q 015398 294 STGLMGKKVFDLYHFNGIAKSD 315 (407)
Q Consensus 294 ~~~~~~~~~F~lyhYNG~~~s~ 315 (407)
...++..+.|.+||.||.++-+
T Consensus 212 ~seEEL~eaFk~fDkDgdG~Is 233 (644)
T PLN02964 212 VAANKKEELFKAADLNGDGVVT 233 (644)
T ss_pred CCHHHHHHHHHHhCCCCCCcCC
Confidence 1223578899999999987633
No 33
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=97.59 E-value=0.00015 Score=66.63 Aligned_cols=61 Identities=23% Similarity=0.335 Sum_probs=56.2
Q ss_pred HHHHHHHHHhcCCCCCCcceehhhHHHHHHHhcCCCCHHHHhcc------cCCCceehHHHHHHHhhh
Q 015398 223 ESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHL------CGSGFIVWSEFWQVILDL 284 (407)
Q Consensus 223 ~~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~l~~eel~~m------dg~GiIl~~eF~~~~l~~ 284 (407)
++.+..||+.||.+ +.|.|.-+.|+++|-..|.++++||+++| |..|.|+|.+|..++-+-
T Consensus 100 e~~I~~AF~~FD~~-~~G~I~~d~lre~Ltt~gDr~~~eEV~~m~r~~p~d~~G~~dy~~~~~~ithG 166 (171)
T KOG0031|consen 100 EEVILNAFKTFDDE-GSGKIDEDYLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFDYKAFTYIITHG 166 (171)
T ss_pred HHHHHHHHHhcCcc-CCCccCHHHHHHHHHHhcccCCHHHHHHHHHhCCcccCCceeHHHHHHHHHcc
Confidence 46799999999999 79999999999999999999999999998 789999999999887543
No 34
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=97.56 E-value=9.9e-05 Score=49.40 Aligned_cols=29 Identities=31% Similarity=0.639 Sum_probs=26.9
Q ss_pred HHHHHHHhcCCCCCCcceehhhHHHHHHHh
Q 015398 225 HIRKAFDAQDKSGGGGFISVEGFQQVIRDT 254 (407)
Q Consensus 225 e~rraFd~fD~~~gnGfIs~~~L~~vL~~L 254 (407)
+++++|+.||++ ++|+|+.+++..+|+.|
T Consensus 1 E~~~~F~~~D~d-~dG~I~~~Ef~~~~~~L 29 (29)
T PF00036_consen 1 ELKEAFREFDKD-GDGKIDFEEFKEMMKKL 29 (29)
T ss_dssp HHHHHHHHHSTT-SSSEEEHHHHHHHHHHT
T ss_pred CHHHHHHHHCCC-CCCcCCHHHHHHHHHhC
Confidence 478999999999 79999999999999876
No 35
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=97.53 E-value=0.00016 Score=68.12 Aligned_cols=59 Identities=34% Similarity=0.528 Sum_probs=50.1
Q ss_pred HHHHHHHHhcCCCCCCcceehhhHHHHHHHh-cCCCC--HHHHhcc----------cCCCceehHHHHHHHhh
Q 015398 224 SHIRKAFDAQDKSGGGGFISVEGFQQVIRDT-NIRLP--REKLDHL----------CGSGFIVWSEFWQVILD 283 (407)
Q Consensus 224 ~e~rraFd~fD~~~gnGfIs~~~L~~vL~~L-gl~l~--~eel~~m----------dg~GiIl~~eF~~~~l~ 283 (407)
++++=||+.||.+ ++|||+-++|.++++++ +...+ +|.++.| |++|.|.|+||.+.+..
T Consensus 104 ~Kl~faF~vYD~~-~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~~ 175 (187)
T KOG0034|consen 104 EKLRFAFRVYDLD-GDGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDGDGKISFEEFCKVVEK 175 (187)
T ss_pred HHHHHHHHHhcCC-CCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHc
Confidence 5899999999999 79999999999999995 54555 5666665 89999999999988754
No 36
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=97.17 E-value=0.00033 Score=67.30 Aligned_cols=77 Identities=19% Similarity=0.253 Sum_probs=63.8
Q ss_pred HHHHHHHHhcCCCCCCcceehhhHHHHHHHhcCCCCHHHHhcc-----cC-CCceehHHHHHHHhhhccccCCCCCcccc
Q 015398 224 SHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHL-----CG-SGFIVWSEFWQVILDLDKSLGGLKDSTGL 297 (407)
Q Consensus 224 ~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~l~~eel~~m-----dg-~GiIl~~eF~~~~l~~e~s~~~~~~~~~~ 297 (407)
..-|.+|+.||.| ++|-|+.+||++.|.++|-.++++-++.+ +. .|.|.|++|.+.......
T Consensus 124 ~~Wr~vF~~~D~D-~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv~L~~----------- 191 (221)
T KOG0037|consen 124 NQWRNVFRTYDRD-RSGTIDSSELRQALTQLGYRLSPQFYNLLVRKYDRFGGGRIDFDDFIQCCVVLQR----------- 191 (221)
T ss_pred HHHHHHHHhcccC-CCCcccHHHHHHHHHHcCcCCCHHHHHHHHHHhccccCCceeHHHHHHHHHHHHH-----------
Confidence 4568999999999 79999999999999999999999998877 24 999999999999665554
Q ss_pred CccceeEEEeeCCccc
Q 015398 298 MGKKVFDLYHFNGIAK 313 (407)
Q Consensus 298 ~~~~~F~lyhYNG~~~ 313 (407)
+-+.|+-+|.+..+.
T Consensus 192 -lt~~Fr~~D~~q~G~ 206 (221)
T KOG0037|consen 192 -LTEAFRRRDTAQQGS 206 (221)
T ss_pred -HHHHHHHhcccccee
Confidence 234666667666654
No 37
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=97.05 E-value=0.0013 Score=57.37 Aligned_cols=62 Identities=13% Similarity=0.117 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHhcCCCCCCcceehhhHHHHHHHhcCCCCHHHHhcc------cCCCceehHHHHHHHhhhcc
Q 015398 220 EERESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHL------CGSGFIVWSEFWQVILDLDK 286 (407)
Q Consensus 220 ~~~~~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~l~~eel~~m------dg~GiIl~~eF~~~~l~~e~ 286 (407)
....++++-+|..+|.+ ++|+|+.++|..++ + ...+..++.+ +++|.|.++||...++..++
T Consensus 44 ~~~~~~l~w~F~~lD~d-~DG~Ls~~EL~~~~--l--~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl~~~~~ 111 (116)
T cd00252 44 PMCKDPVGWMFNQLDGN-YDGKLSHHELAPIR--L--DPNEHCIKPFFESCDLDKDGSISLDEWCYCFIKEDD 111 (116)
T ss_pred HHHHHHHHHHHHHHCCC-CCCcCCHHHHHHHH--c--cchHHHHHHHHHHHCCCCCCCCCHHHHHHHHhChhh
Confidence 34557899999999999 79999999999987 2 2233334433 89999999999999954433
No 38
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=95.97 E-value=0.012 Score=61.41 Aligned_cols=62 Identities=23% Similarity=0.355 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHhcCCCCCCcceehhhHHHHHHHhcCCCCHHHHhc----c--cCCCceehHHHHHHHh
Q 015398 220 EERESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDH----L--CGSGFIVWSEFWQVIL 282 (407)
Q Consensus 220 ~~~~~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~l~~eel~~----m--dg~GiIl~~eF~~~~l 282 (407)
...|.++.+.|+..|.+ -||-|.++++.+-|+.+|+++++|+++. | ++.++|+|+||-+.++
T Consensus 78 ~~~E~~l~~~F~~iD~~-hdG~i~~~Ei~~~l~~~gi~l~de~~~k~~e~~d~~g~~~I~~~e~rd~~l 145 (463)
T KOG0036|consen 78 DNKELELYRIFQSIDLE-HDGKIDPNEIWRYLKDLGIQLSDEKAAKFFEHMDKDGKATIDLEEWRDHLL 145 (463)
T ss_pred HHhHHHHHHHHhhhccc-cCCccCHHHHHHHHHHhCCccCHHHHHHHHHHhccCCCeeeccHHHHhhhh
Confidence 34567889999999999 6999999999999999999999998766 4 8999999999977754
No 39
>PLN02964 phosphatidylserine decarboxylase
Probab=95.90 E-value=0.016 Score=63.77 Aligned_cols=60 Identities=20% Similarity=0.289 Sum_probs=53.8
Q ss_pred HHHHHHHHhcCCCCCCcceehhhHHHHHHHhcCCCCHHHHhcc------cCCCceehHHHHHHHhhh
Q 015398 224 SHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHL------CGSGFIVWSEFWQVILDL 284 (407)
Q Consensus 224 ~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~l~~eel~~m------dg~GiIl~~eF~~~~l~~ 284 (407)
..++++|+.+|.+ ++|.|+-+++.++|..++...+++++.++ +++|.|.++||.+.+...
T Consensus 179 ~fi~~mf~~~D~D-gdG~IdfdEFl~lL~~lg~~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~~ 244 (644)
T PLN02964 179 SFARRILAIVDYD-EDGQLSFSEFSDLIKAFGNLVAANKKEELFKAADLNGDGVVTIDELAALLALQ 244 (644)
T ss_pred HHHHHHHHHhCCC-CCCeEcHHHHHHHHHHhccCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhc
Confidence 4589999999999 79999999999999999988888888876 799999999999887663
No 40
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=95.87 E-value=0.0096 Score=54.73 Aligned_cols=61 Identities=26% Similarity=0.463 Sum_probs=52.1
Q ss_pred HHHHHHHHHHhcCCCCCCcceehhhHHHHHHHhcCC-CCHHHHhcc----------cCCCceehHHHHHHHhh
Q 015398 222 RESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIR-LPREKLDHL----------CGSGFIVWSEFWQVILD 283 (407)
Q Consensus 222 ~~~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~-l~~eel~~m----------dg~GiIl~~eF~~~~l~ 283 (407)
+.-++..||+.||.+ +++||-.+.|.+.+..|--. +++||++.+ ||+|.+.|.||-.+++.
T Consensus 106 rdlK~~YAFkIYDfd-~D~~i~~~DL~~~l~~lTr~eLs~eEv~~i~ekvieEAD~DgDgkl~~~eFe~~i~r 177 (189)
T KOG0038|consen 106 RDLKAKYAFKIYDFD-GDEFIGHDDLEKTLTSLTRDELSDEEVELICEKVIEEADLDGDGKLSFAEFEHVILR 177 (189)
T ss_pred HHhhhhheeEEeecC-CCCcccHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Confidence 334788999999999 79999999999999998654 888887654 89999999999988764
No 41
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=95.64 E-value=0.031 Score=53.12 Aligned_cols=86 Identities=16% Similarity=0.151 Sum_probs=65.5
Q ss_pred HHHHHHHHhcCCCCCCcceehhhHHHHHHHhcCCCCHHHHhc-c------cCCCceehHHHHHHHhhhccccCCCCCccc
Q 015398 224 SHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDH-L------CGSGFIVWSEFWQVILDLDKSLGGLKDSTG 296 (407)
Q Consensus 224 ~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~l~~eel~~-m------dg~GiIl~~eF~~~~l~~e~s~~~~~~~~~ 296 (407)
.++++-++.|=.++-+|-++.++++.++++..-..+++...+ + +++|.|+|.||+..+-...+... .
T Consensus 26 ~ei~~~Yr~Fk~~cP~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~rGt~------e 99 (193)
T KOG0044|consen 26 KEIQQWYRGFKNECPSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLEFICALSLTSRGTL------E 99 (193)
T ss_pred HHHHHHHHHhcccCCCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcCCcH------H
Confidence 567777788877877999999999999999998666654433 3 88999999999988655444221 1
Q ss_pred cCccceeEEEeeCCccccc
Q 015398 297 LMGKKVFDLYHFNGIAKSD 315 (407)
Q Consensus 297 ~~~~~~F~lyhYNG~~~s~ 315 (407)
+.++=+|++||-||.|+-.
T Consensus 100 ekl~w~F~lyD~dgdG~It 118 (193)
T KOG0044|consen 100 EKLKWAFRLYDLDGDGYIT 118 (193)
T ss_pred HHhhhhheeecCCCCceEc
Confidence 2355689999999999633
No 42
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=95.63 E-value=0.015 Score=37.54 Aligned_cols=25 Identities=40% Similarity=0.720 Sum_probs=22.2
Q ss_pred HHHHHHhcCCCCCCcceehhhHHHHH
Q 015398 226 IRKAFDAQDKSGGGGFISVEGFQQVI 251 (407)
Q Consensus 226 ~rraFd~fD~~~gnGfIs~~~L~~vL 251 (407)
++++|+.+|.+ ++|.|+.+++++++
T Consensus 1 l~~~F~~~D~d-~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 1 LKDAFQQFDTD-GDGKISFEEFQRLV 25 (25)
T ss_dssp HHHHHHHHTTT-SSSEEEHHHHHHHH
T ss_pred CHHHHHHHcCC-CCCcCCHHHHHHHC
Confidence 46789999999 79999999999874
No 43
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=95.53 E-value=0.024 Score=59.86 Aligned_cols=58 Identities=19% Similarity=0.264 Sum_probs=47.3
Q ss_pred HHHHHHHhcCCCCCCcceehhhHHHHHHHhc----CCCCHHHHhcc------cCCCceehHHHHHHHhh
Q 015398 225 HIRKAFDAQDKSGGGGFISVEGFQQVIRDTN----IRLPREKLDHL------CGSGFIVWSEFWQVILD 283 (407)
Q Consensus 225 e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lg----l~l~~eel~~m------dg~GiIl~~eF~~~~l~ 283 (407)
.++-.|+..|.| .+|+|+.+++++.-+-|+ ..++++++.++ +++|.|+++||++.|-=
T Consensus 548 ~LetiF~~iD~D-~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAFrl 615 (631)
T KOG0377|consen 548 SLETIFNIIDAD-NSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDLNEFLEAFRL 615 (631)
T ss_pred hHHHHHHHhccC-CCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccHHHHHHHHhh
Confidence 456679999999 699999999999877654 55677777554 79999999999988743
No 44
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=95.39 E-value=0.015 Score=60.68 Aligned_cols=60 Identities=22% Similarity=0.327 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHhcCCCCCCcceehhhHHHHHHHhcCC-CCHHHH----hcc--cCCCceehHHHHHH
Q 015398 220 EERESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIR-LPREKL----DHL--CGSGFIVWSEFWQV 280 (407)
Q Consensus 220 ~~~~~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~-l~~eel----~~m--dg~GiIl~~eF~~~ 280 (407)
++++.++++.|+.||-+ ++|+++..+|.+-|.+|+.. .+.+.. ..| +.+|.+||+||.+-
T Consensus 10 ~er~~r~~~lf~~lD~~-~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y 76 (463)
T KOG0036|consen 10 EERDIRIRCLFKELDSK-NDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRY 76 (463)
T ss_pred HHHHHHHHHHHHHhccC-CCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHH
Confidence 56778999999999999 79999999999999999998 443333 334 78999999999765
No 45
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=95.26 E-value=0.023 Score=53.58 Aligned_cols=84 Identities=17% Similarity=0.325 Sum_probs=60.2
Q ss_pred HHHHHHHHhcCCCCCCcceehhhHHHHHHHhcCCCCHHHHhcc---cCCCc-eehHHHHHHHhhhccccCCCCCccccCc
Q 015398 224 SHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHL---CGSGF-IVWSEFWQVILDLDKSLGGLKDSTGLMG 299 (407)
Q Consensus 224 ~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~l~~eel~~m---dg~Gi-Il~~eF~~~~l~~e~s~~~~~~~~~~~~ 299 (407)
+.+-+.|..+|..++.|+|+.+++..+. ++..++=.+-+=.+ .++|. |.|++|++.+-...... +....+
T Consensus 33 ~~L~~rF~kl~~~~~~g~lt~eef~~i~-~~~~Np~~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~-----~~~~Kl 106 (187)
T KOG0034|consen 33 ERLYERFKKLDRNNGDGYLTKEEFLSIP-ELALNPLADRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKA-----SKREKL 106 (187)
T ss_pred HHHHHHHHHhccccccCccCHHHHHHHH-HHhcCcHHHHHHHHHhccCCCCccCHHHHHHHHhhhcCCc-----cHHHHH
Confidence 4678889999999668999999999999 66666444444333 56777 99999999854322210 000123
Q ss_pred cceeEEEeeCCccc
Q 015398 300 KKVFDLYHFNGIAK 313 (407)
Q Consensus 300 ~~~F~lyhYNG~~~ 313 (407)
.=+|++||.|+.|.
T Consensus 107 ~faF~vYD~~~~G~ 120 (187)
T KOG0034|consen 107 RFAFRVYDLDGDGF 120 (187)
T ss_pred HHHHHHhcCCCCCc
Confidence 44999999999996
No 46
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=94.98 E-value=0.028 Score=33.93 Aligned_cols=28 Identities=32% Similarity=0.630 Sum_probs=24.9
Q ss_pred HHHHHHhcCCCCCCcceehhhHHHHHHHh
Q 015398 226 IRKAFDAQDKSGGGGFISVEGFQQVIRDT 254 (407)
Q Consensus 226 ~rraFd~fD~~~gnGfIs~~~L~~vL~~L 254 (407)
++++|+.+|.+ ++|+|+.+++..+++++
T Consensus 2 ~~~~f~~~d~~-~~g~i~~~e~~~~~~~~ 29 (29)
T smart00054 2 LKEAFRLFDKD-GDGKIDFEEFKDLLKAL 29 (29)
T ss_pred HHHHHHHHCCC-CCCcEeHHHHHHHHHhC
Confidence 67899999999 69999999999998764
No 47
>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]
Probab=94.45 E-value=0.078 Score=57.01 Aligned_cols=62 Identities=19% Similarity=0.483 Sum_probs=52.7
Q ss_pred HHHHHHHHhcCCCCCCcceehhhHHHHHHHhcCCC---CHHHHhcc------cCCCceehHHHHHHHhhhccc
Q 015398 224 SHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRL---PREKLDHL------CGSGFIVWSEFWQVILDLDKS 287 (407)
Q Consensus 224 ~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~l---~~eel~~m------dg~GiIl~~eF~~~~l~~e~s 287 (407)
.++++.|...| + ++|||+..+|.++++..+..+ ..|+++++ +.+|.|+|++|+..|+.....
T Consensus 19 ~~l~~kF~~~d-~-~~G~v~~~~l~~~f~k~~~~~g~~~~eei~~~l~~~~~~~~g~v~fe~f~~~~~~l~s~ 89 (627)
T KOG0046|consen 19 RELKEKFNKLD-D-QKGYVTVYELPDAFKKAKLPLGYFVREEIKEILGEVGVDADGRVEFEEFVGIFLNLKSK 89 (627)
T ss_pred HHHHHHHHhhc-C-CCCeeehHHhHHHHHHhcccccchhHHHHHHHHhccCCCcCCccCHHHHHHHHHhhhhh
Confidence 46889999999 6 699999999999999999876 35666665 789999999999999876653
No 48
>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]
Probab=94.36 E-value=0.065 Score=51.59 Aligned_cols=57 Identities=16% Similarity=0.304 Sum_probs=47.2
Q ss_pred HHHHHHHHhcCCCCCCcceehhhHHHHHHHhcCCCCHHHHhcc------cCCCceehHHHHHHH
Q 015398 224 SHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHL------CGSGFIVWSEFWQVI 281 (407)
Q Consensus 224 ~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~l~~eel~~m------dg~GiIl~~eF~~~~ 281 (407)
+.+...|+.||.+ .+|||+-.+|+.+|+.||-.=+-=-+++| |.+|.|.|-||+-.|
T Consensus 99 k~~~~~Fk~yDe~-rDgfIdl~ELK~mmEKLgapQTHL~lK~mikeVded~dgklSfreflLIf 161 (244)
T KOG0041|consen 99 KDAESMFKQYDED-RDGFIDLMELKRMMEKLGAPQTHLGLKNMIKEVDEDFDGKLSFREFLLIF 161 (244)
T ss_pred HHHHHHHHHhccc-ccccccHHHHHHHHHHhCCchhhHHHHHHHHHhhcccccchhHHHHHHHH
Confidence 4678889999999 79999999999999999985443334444 789999999998554
No 49
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=94.26 E-value=0.18 Score=42.62 Aligned_cols=63 Identities=14% Similarity=0.331 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcceehhhHHHHHHH-hc----CCCCHHHHhcc------cCCCceehHHHHHHHhh
Q 015398 219 LEERESHIRKAFDAQDKSGGGGFISVEGFQQVIRD-TN----IRLPREKLDHL------CGSGFIVWSEFWQVILD 283 (407)
Q Consensus 219 ~~~~~~e~rraFd~fD~~~gnGfIs~~~L~~vL~~-Lg----l~l~~eel~~m------dg~GiIl~~eF~~~~l~ 283 (407)
.|..-..+-.+|..|-- +.+-++-.+|+++|.. |. -.-+++.++.+ +++|.|+|.|||.....
T Consensus 3 LE~ai~~lI~~FhkYaG--~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~ 76 (91)
T cd05024 3 LEHSMEKMMLTFHKFAG--EKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDDCRDGKVGFQSFFSLIAG 76 (91)
T ss_pred HHHHHHHHHHHHHHHcC--CCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 34455678889999993 4689999999999964 43 34467777765 88999999999988543
No 50
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=93.95 E-value=0.092 Score=54.76 Aligned_cols=50 Identities=24% Similarity=0.284 Sum_probs=38.4
Q ss_pred HHHHHHHHHHhcCCCCCCcceehhhHHHHHHHhcCCCCHHHHhcc--cCCCceehHHHHHHH
Q 015398 222 RESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHL--CGSGFIVWSEFWQVI 281 (407)
Q Consensus 222 ~~~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~l~~eel~~m--dg~GiIl~~eF~~~~ 281 (407)
.+..++.+|+.||.+ |+|+|+.+++.. .+.-.+.+ +++|.|.++||.+.+
T Consensus 332 ~~~~l~~aF~~~D~d-gdG~Is~~E~~~---------~~~~F~~~D~d~DG~Is~eEf~~~~ 383 (391)
T PRK12309 332 FTHAAQEIFRLYDLD-GDGFITREEWLG---------SDAVFDALDLNHDGKITPEEMRAGL 383 (391)
T ss_pred hhHHHHHHHHHhCCC-CCCcCcHHHHHH---------HHHHHHHhCCCCCCCCcHHHHHHHH
Confidence 446778999999999 799999999842 12223333 799999999998765
No 51
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=93.57 E-value=0.079 Score=51.24 Aligned_cols=58 Identities=21% Similarity=0.261 Sum_probs=49.4
Q ss_pred HHHHHHHHhcCCCCCCcceehhhHHHHHHHhcCC-CCHHHHhcc------cCCCceehHHHHHHHh
Q 015398 224 SHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIR-LPREKLDHL------CGSGFIVWSEFWQVIL 282 (407)
Q Consensus 224 ~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~-l~~eel~~m------dg~GiIl~~eF~~~~l 282 (407)
.++-..|...|.+ +.|+|+.++|++.|...+-. .+.+-+..| +.+|.|.|+||...+.
T Consensus 57 ~~~~~~f~~vD~d-~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~ 121 (221)
T KOG0037|consen 57 PQLAGWFQSVDRD-RSGRILAKELQQALSNGTWSPFSIETCRLMISMFDRDNSGTIGFKEFKALWK 121 (221)
T ss_pred HHHHHHHHhhCcc-ccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHH
Confidence 3788899999999 79999999999999865544 788888777 8899999999987744
No 52
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=93.25 E-value=0.28 Score=42.11 Aligned_cols=54 Identities=20% Similarity=0.366 Sum_probs=46.0
Q ss_pred HHHHHHHHhcCCCCCCcceehhhHHHHHHHhcCCCCHHHHhcc------cCCCceehHHHHHHH
Q 015398 224 SHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHL------CGSGFIVWSEFWQVI 281 (407)
Q Consensus 224 ~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~l~~eel~~m------dg~GiIl~~eF~~~~ 281 (407)
++.++.|+..|+. +|+|+.++...+|..-|+ +.+.|..+ +++|.++++||.-.|
T Consensus 10 ~~y~~~F~~l~~~--~g~isg~~a~~~f~~S~L--~~~~L~~IW~LaD~~~dG~L~~~EF~iAm 69 (104)
T PF12763_consen 10 QKYDQIFQSLDPQ--DGKISGDQAREFFMKSGL--PRDVLAQIWNLADIDNDGKLDFEEFAIAM 69 (104)
T ss_dssp HHHHHHHHCTSSS--TTEEEHHHHHHHHHHTTS--SHHHHHHHHHHH-SSSSSEEEHHHHHHHH
T ss_pred HHHHHHHHhcCCC--CCeEeHHHHHHHHHHcCC--CHHHHHHHHhhhcCCCCCcCCHHHHHHHH
Confidence 5788999999864 799999999999998777 66777665 899999999998764
No 53
>KOG4065 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.11 E-value=0.13 Score=45.83 Aligned_cols=53 Identities=23% Similarity=0.326 Sum_probs=38.9
Q ss_pred HHHHHhcCCCCCCcceehhhHHHHHHHhcC----------CCCHHHHhcc----------cCCCceehHHHHHH
Q 015398 227 RKAFDAQDKSGGGGFISVEGFQQVIRDTNI----------RLPREKLDHL----------CGSGFIVWSEFWQV 280 (407)
Q Consensus 227 rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl----------~l~~eel~~m----------dg~GiIl~~eF~~~ 280 (407)
-.-|+++|.+ +|||++--+|-..+--.-. .+++.|++.| +++|.|+|.||++.
T Consensus 70 fHYF~MHDld-knn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDYgEflK~ 142 (144)
T KOG4065|consen 70 FHYFSMHDLD-KNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDYGEFLKR 142 (144)
T ss_pred hhhhhhhccC-cCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeHHHHHhh
Confidence 3459999999 7999998777666543222 2445677666 68999999999863
No 54
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=92.70 E-value=0.14 Score=48.80 Aligned_cols=59 Identities=20% Similarity=0.306 Sum_probs=43.8
Q ss_pred HHHHHHHHHhcCCCCCCcceehhhHHHHHHHhcCCCC----------HHHH-----hcc--cCCCceehHHHHHHHh
Q 015398 223 ESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLP----------REKL-----DHL--CGSGFIVWSEFWQVIL 282 (407)
Q Consensus 223 ~~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~l~----------~eel-----~~m--dg~GiIl~~eF~~~~l 282 (407)
+++++=+|++||.+ |+|||+-+++=+|+++.-..+. +++. ..| +.+|.|.++||.....
T Consensus 99 eekl~w~F~lyD~d-gdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~ 174 (193)
T KOG0044|consen 99 EEKLKWAFRLYDLD-GDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGKLTLEEFIEGCK 174 (193)
T ss_pred HHHhhhhheeecCC-CCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCcccHHHHHHHhh
Confidence 35667779999999 7999999999888887443322 2222 234 7899999999987653
No 55
>KOG4251 consensus Calcium binding protein [General function prediction only]
Probab=92.06 E-value=0.22 Score=49.46 Aligned_cols=80 Identities=24% Similarity=0.344 Sum_probs=55.7
Q ss_pred CceEEEEecCcCcccc-chHHHHHHHHHHHHHhcCCCCCCcceehhhHHHHHHH-hcCCCCHHHHhc-------c--cCC
Q 015398 201 SHYTVLFALDTSVQDE-NELEERESHIRKAFDAQDKSGGGGFISVEGFQQVIRD-TNIRLPREKLDH-------L--CGS 269 (407)
Q Consensus 201 ~hysVLF~~~~~l~~~-~~~~~~~~e~rraFd~fD~~~gnGfIs~~~L~~vL~~-Lgl~l~~eel~~-------m--dg~ 269 (407)
-|--|+|+.|-.-.+. .++......+...|..-|-+ .+|||++.++++-+++ ....+ ++..++ . +++
T Consensus 77 FhQEvflgkdLggfDedaeprrsrrklmviFsKvDVN-tDrkisAkEmqrwImektaEHf-qeameeSkthFraVDpdgD 154 (362)
T KOG4251|consen 77 FHQEVFLGKDLGGFDEDAEPRRSRRKLMVIFSKVDVN-TDRKISAKEMQRWIMEKTAEHF-QEAMEESKTHFRAVDPDGD 154 (362)
T ss_pred hhhhheeccCCCCcccccchhHHHHHHHHHHhhcccC-ccccccHHHHHHHHHHHHHHHH-HHHHhhhhhheeeeCCCCC
Confidence 4667888888665544 34445556888899999999 6999999999876553 22211 111111 1 899
Q ss_pred CceehHHHHHHHh
Q 015398 270 GFIVWSEFWQVIL 282 (407)
Q Consensus 270 GiIl~~eF~~~~l 282 (407)
|.|.|+||.--|+
T Consensus 155 GhvsWdEykvkFl 167 (362)
T KOG4251|consen 155 GHVSWDEYKVKFL 167 (362)
T ss_pred CceehhhhhhHHH
Confidence 9999999977766
No 56
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=90.89 E-value=0.42 Score=36.46 Aligned_cols=40 Identities=23% Similarity=0.305 Sum_probs=30.6
Q ss_pred eehhhHHHHHHHhcCCCCHHHHhcc------cCCCceehHHHHHHH
Q 015398 242 ISVEGFQQVIRDTNIRLPREKLDHL------CGSGFIVWSEFWQVI 281 (407)
Q Consensus 242 Is~~~L~~vL~~Lgl~l~~eel~~m------dg~GiIl~~eF~~~~ 281 (407)
++-++++.+|+.+|+.+++++...+ +++|.+..+||.+.+
T Consensus 2 msf~Evk~lLk~~NI~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy 47 (51)
T PF14788_consen 2 MSFKEVKKLLKMMNIEMDDEYARQLFQECDKSQSGRLEGEEFEEFY 47 (51)
T ss_dssp BEHHHHHHHHHHTT----HHHHHHHHHHH-SSSSSEBEHHHHHHHH
T ss_pred CCHHHHHHHHHHHccCcCHHHHHHHHHHhcccCCCCccHHHHHHHH
Confidence 4678899999999999999988777 789999999997665
No 57
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=89.90 E-value=0.3 Score=45.16 Aligned_cols=42 Identities=21% Similarity=0.429 Sum_probs=30.6
Q ss_pred cCCCceehHHHHHHHhhhccccCCCCCccccCccceeEEEeeCCccc
Q 015398 267 CGSGFIVWSEFWQVILDLDKSLGGLKDSTGLMGKKVFDLYHFNGIAK 313 (407)
Q Consensus 267 dg~GiIl~~eF~~~~l~~e~s~~~~~~~~~~~~~~~F~lyhYNG~~~ 313 (407)
||.|.+.|++|+.||.-.... +|..-..+-+|++|||||...
T Consensus 83 DG~GnlsfddFlDmfSV~sE~-----APrdlK~~YAFkIYDfd~D~~ 124 (189)
T KOG0038|consen 83 DGRGNLSFDDFLDMFSVFSEM-----APRDLKAKYAFKIYDFDGDEF 124 (189)
T ss_pred CCCCcccHHHHHHHHHHHHhh-----ChHHhhhhheeEEeecCCCCc
Confidence 899999999999997643331 122223455999999999874
No 58
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=89.17 E-value=0.67 Score=33.83 Aligned_cols=29 Identities=24% Similarity=0.592 Sum_probs=26.4
Q ss_pred HHHHHHHHhcCCCCCCcceehhhHHHHHHH
Q 015398 224 SHIRKAFDAQDKSGGGGFISVEGFQQVIRD 253 (407)
Q Consensus 224 ~e~rraFd~fD~~~gnGfIs~~~L~~vL~~ 253 (407)
++++..|+.+|.+ ++|+|+-+++-.+|..
T Consensus 25 ~e~~~l~~~~D~~-~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 25 EEVDRLFREFDTD-GDGYISFDEFISMMQR 53 (54)
T ss_dssp HHHHHHHHHHTTS-SSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHhcccC-CCCCCCHHHHHHHHHh
Confidence 5799999999999 7999999999998875
No 59
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=87.65 E-value=0.93 Score=30.21 Aligned_cols=16 Identities=31% Similarity=0.478 Sum_probs=14.4
Q ss_pred cCCCceehHHHHHHHh
Q 015398 267 CGSGFIVWSEFWQVIL 282 (407)
Q Consensus 267 dg~GiIl~~eF~~~~l 282 (407)
+++|.|+++||..++-
T Consensus 12 d~dG~I~~~Ef~~~~~ 27 (29)
T PF00036_consen 12 DGDGKIDFEEFKEMMK 27 (29)
T ss_dssp TSSSEEEHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHH
Confidence 8999999999998763
No 60
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=86.90 E-value=0.47 Score=48.39 Aligned_cols=90 Identities=20% Similarity=0.292 Sum_probs=62.0
Q ss_pred HHHHHHHHHHhcCCCCCCcceehhhHHHHHHHhcCC-C----CHHHHhcc--cCCCceehHHHHHHHhhhccccCCCCCc
Q 015398 222 RESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIR-L----PREKLDHL--CGSGFIVWSEFWQVILDLDKSLGGLKDS 294 (407)
Q Consensus 222 ~~~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~-l----~~eel~~m--dg~GiIl~~eF~~~~l~~e~s~~~~~~~ 294 (407)
...+=++.|+.-|++ ++|-.+-+++-.+|.--.-. | -.|.+++| +++|.|+++||+.-|+.-+... ++|
T Consensus 161 m~~rDe~rFk~AD~d-~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~~~~---~ep 236 (325)
T KOG4223|consen 161 MIARDEERFKAADQD-GDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSHEGNE---EEP 236 (325)
T ss_pred HHHHHHHHHhhcccC-CCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhccCCC---CCc
Confidence 334567889999999 79999999998887532211 1 12444445 8999999999999988655411 111
Q ss_pred --cccCccceeEEEeeCCccccc
Q 015398 295 --TGLMGKKVFDLYHFNGIAKSD 315 (407)
Q Consensus 295 --~~~~~~~~F~lyhYNG~~~s~ 315 (407)
...+...-|+.++.|+-++-+
T Consensus 237 eWv~~Ere~F~~~~DknkDG~L~ 259 (325)
T KOG4223|consen 237 EWVLTEREQFFEFRDKNKDGKLD 259 (325)
T ss_pred ccccccHHHHHHHhhcCCCCccC
Confidence 112345578899999999844
No 61
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=85.17 E-value=1.6 Score=32.91 Aligned_cols=31 Identities=32% Similarity=0.532 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHhcCCCCCCcceehhhHHHHH
Q 015398 220 EERESHIRKAFDAQDKSGGGGFISVEGFQQVI 251 (407)
Q Consensus 220 ~~~~~e~rraFd~fD~~~gnGfIs~~~L~~vL 251 (407)
+...+.++.+|+.+|.+ ++|.|+.+++...|
T Consensus 36 ~~~~~~~~~~~~~~D~d-~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 36 EESDEMIDQIFREFDTD-GDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHHHHHHTTT-SSSSEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCC-CcCCCcHHHHhccC
Confidence 44556888999999999 79999999998764
No 62
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=83.72 E-value=0.96 Score=37.18 Aligned_cols=42 Identities=17% Similarity=0.298 Sum_probs=38.0
Q ss_pred HHHHHHHHhcCCCCCCcceehhhHHHHHHHhcCCCCHHHHhcc
Q 015398 224 SHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHL 266 (407)
Q Consensus 224 ~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~l~~eel~~m 266 (407)
+++++.|+.+|.+ ++|.|+-+++-+++..+++-+.+.++++|
T Consensus 51 ~ei~~~~~~~D~~-~dg~I~f~eF~~l~~~~~~~~~~~~~~~~ 92 (94)
T cd05031 51 MAVDKIMKDLDQN-RDGKVNFEEFVSLVAGLSIACEEYYVKHM 92 (94)
T ss_pred HHHHHHHHHhCCC-CCCcCcHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4788999999999 79999999999999999998888888876
No 63
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=79.61 E-value=8.7 Score=30.60 Aligned_cols=61 Identities=20% Similarity=0.385 Sum_probs=47.9
Q ss_pred HHHHHHHhcCCCCCCcceehhhHHHHHHHh-cC-CCCHHHHhcc----------cCCCceehHHHHHHHhhhccc
Q 015398 225 HIRKAFDAQDKSGGGGFISVEGFQQVIRDT-NI-RLPREKLDHL----------CGSGFIVWSEFWQVILDLDKS 287 (407)
Q Consensus 225 e~rraFd~fD~~~gnGfIs~~~L~~vL~~L-gl-~l~~eel~~m----------dg~GiIl~~eF~~~~l~~e~s 287 (407)
+++.+|+.|-. ++++||.++|.+.|++- +. ..++++++.+ ...+.+.+++|...++..+.+
T Consensus 1 ei~~if~~ys~--~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~S~~N~ 73 (83)
T PF09279_consen 1 EIEEIFRKYSS--DKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLFSDENS 73 (83)
T ss_dssp HHHHHHHHHCT--TSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHHSTTCB
T ss_pred CHHHHHHHHhC--CCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHHCCCcCC
Confidence 46889999955 47999999999999764 34 3677777665 358999999999998876654
No 64
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=79.56 E-value=1.8 Score=46.24 Aligned_cols=108 Identities=16% Similarity=0.328 Sum_probs=71.2
Q ss_pred eeeecccCCccccccCC---------CCCCCceEEEeeCCceEEEEecCcCccccch-------HHHHHHHHHHHHHhcC
Q 015398 171 FLTLLESLNFCKVGQHL---------KCPKWPIWVVGSESHYTVLFALDTSVQDENE-------LEERESHIRKAFDAQD 234 (407)
Q Consensus 171 fLt~~E~~~~~~VGs~l---------K~P~~PIWv~~s~~hysVLF~~~~~l~~~~~-------~~~~~~e~rraFd~fD 234 (407)
-||++-+-||.++||+- ++|+|=-.....-+|.. -|-.....+.++. ...+...++++|+.+|
T Consensus 396 vlTiFSASNYYe~GSNrGAYikl~~~~~PhfvQY~a~k~t~~~-tlrqR~~~vEeSAlk~Lrerl~s~~sdL~~eF~~~D 474 (631)
T KOG0377|consen 396 VLTIFSASNYYEIGSNRGAYIKLGNQLTPHFVQYQAAKQTKRL-TLRQRMGIVEESALKELRERLRSHRSDLEDEFRKYD 474 (631)
T ss_pred EEEEEeccchheecCCCceEEEeCCCCCchHHHHHhhhhhhhh-hHHHHhhHHHHHHHHHHHHHHHhhhhHHHHHHHhcC
Confidence 47888888999998763 36665555544444433 2222223333322 2233456788999999
Q ss_pred CCCCCcceehhhHHHHHHH-hcCCCCHHH----HhcccCCCceehHHHHHH
Q 015398 235 KSGGGGFISVEGFQQVIRD-TNIRLPREK----LDHLCGSGFIVWSEFWQV 280 (407)
Q Consensus 235 ~~~gnGfIs~~~L~~vL~~-Lgl~l~~ee----l~~mdg~GiIl~~eF~~~ 280 (407)
++ .+|+|+...-...|+. +|+.++=-- +-..+.+|.+.|.+-++.
T Consensus 475 ~~-ksG~lsis~Wa~~mE~i~~L~LPWr~L~~kla~~s~d~~v~Y~~~~~~ 524 (631)
T KOG0377|consen 475 PK-KSGKLSISHWAKCMENITGLNLPWRLLRPKLANGSDDGKVEYKSTLDN 524 (631)
T ss_pred hh-hcCeeeHHHHHHHHHHHhcCCCcHHHhhhhccCCCcCcceehHhHHHH
Confidence 99 7999999999999988 777776433 333477888888776554
No 65
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=73.88 E-value=3.5 Score=42.23 Aligned_cols=93 Identities=16% Similarity=0.271 Sum_probs=60.6
Q ss_pred HHHHHHHHHHhcCCCCCCcceehhhHHHHHHHhcCC-CCHHHHhcc-----cCCCceehHHHHHHHhhhcc-------cc
Q 015398 222 RESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIR-LPREKLDHL-----CGSGFIVWSEFWQVILDLDK-------SL 288 (407)
Q Consensus 222 ~~~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~-l~~eel~~m-----dg~GiIl~~eF~~~~l~~e~-------s~ 288 (407)
.++++.+.|.+.|-+ ++|||+..+|+..+.+---+ +-.+..+.+ +.+|+|.|+|+...+..-+. ..
T Consensus 75 ~~~rl~~l~~~iD~~-~Dgfv~~~El~~wi~~s~k~~v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~~~~~~~~~d~e 153 (325)
T KOG4223|consen 75 SQERLGKLVPKIDSD-SDGFVTESELKAWIMQSQKKYVVEEAARRWDEYDKNKDGFITWEEYLPQTYGRVDLPDEFPDEE 153 (325)
T ss_pred hHHHHHHHHhhhcCC-CCCceeHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccceeeHHHhhhhhhhcccCccccccch
Confidence 557899999999976 79999999999877653332 222222222 78999999999988653111 00
Q ss_pred CCCCCccccC---ccceeEEEeeCCcccccCC
Q 015398 289 GGLKDSTGLM---GKKVFDLYHFNGIAKSDLN 317 (407)
Q Consensus 289 ~~~~~~~~~~---~~~~F~lyhYNG~~~s~~~ 317 (407)
.. ..-..| -++.|..-++||.+.-+..
T Consensus 154 ~~--~~~~km~~rDe~rFk~AD~d~dg~lt~E 183 (325)
T KOG4223|consen 154 DN--EEYKKMIARDEERFKAADQDGDGSLTLE 183 (325)
T ss_pred hc--HHHHHHHHHHHHHHhhcccCCCCcccHH
Confidence 00 000011 2458999999999865443
No 66
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=73.13 E-value=2.4 Score=34.16 Aligned_cols=52 Identities=15% Similarity=0.328 Sum_probs=35.6
Q ss_pred HHHHHHHHhcCCCCCCcceehhhHHHHHHHhcCCCCH-HH-Hhcc---c------CCCceehHHHHHHHh
Q 015398 224 SHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPR-EK-LDHL---C------GSGFIVWSEFWQVIL 282 (407)
Q Consensus 224 ~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~l~~-ee-l~~m---d------g~GiIl~~eF~~~~l 282 (407)
++++++|+.. .+ |.+|||.++|++.|- ..+ |+ ++.| . ..|-.||..|++.+|
T Consensus 6 eqv~~aFr~l-A~-~KpyVT~~dLr~~l~-----pe~aey~~~~Mp~~~~~~~~~~~~~~DY~~f~~~l~ 68 (69)
T PF08726_consen 6 EQVEEAFRAL-AG-GKPYVTEEDLRRSLT-----PEQAEYCISRMPPYEGPDGDAIPGAYDYESFTNSLF 68 (69)
T ss_dssp HHHHHHHHHH-CT-SSSCEEHHHHHHHS------CCCHHHHHCCSEC--SSS----TTEEECHHHHCCCT
T ss_pred HHHHHHHHHH-Hc-CCCcccHHHHHHHcC-----cHHHHHHHHHCcccCCCCcCCCCCCcCHHHHHHHHh
Confidence 5899999999 65 689999999999732 111 22 4556 1 237788888876543
No 67
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=68.89 E-value=14 Score=33.55 Aligned_cols=55 Identities=22% Similarity=0.429 Sum_probs=40.1
Q ss_pred HHHHHhc---CCCCCCcceehhhHHHHHHHhcC---CCCHHHHhcc------cCCCceehHHHHHHHh
Q 015398 227 RKAFDAQ---DKSGGGGFISVEGFQQVIRDTNI---RLPREKLDHL------CGSGFIVWSEFWQVIL 282 (407)
Q Consensus 227 rraFd~f---D~~~gnGfIs~~~L~~vL~~Lgl---~l~~eel~~m------dg~GiIl~~eF~~~~l 282 (407)
+++|..| -.. +...|+...+..+|++.++ +++...++.+ .+...|+|++|++.+-
T Consensus 2 ~~~F~~f~~fG~~-~~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL~ 68 (154)
T PF05517_consen 2 EAVFKAFASFGKK-NGTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAKGARKITFEQFLEALA 68 (154)
T ss_dssp HHHHHHHHCSSTS-TSSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-SS-SEEEHHHHHHHHH
T ss_pred HHHHHHHHHhcCC-ccccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcCCCcccCHHHHHHHHH
Confidence 4455555 433 4689999999999999887 4777888776 3456799999988743
No 68
>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=68.10 E-value=8.5 Score=46.64 Aligned_cols=84 Identities=18% Similarity=0.334 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHhcCCCCCCcceehhhHHHHHHHhcCCCCH--H-----HHhc-c-----cCCCceehHHHHHHHhhhcc
Q 015398 220 EERESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPR--E-----KLDH-L-----CGSGFIVWSEFWQVILDLDK 286 (407)
Q Consensus 220 ~~~~~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~l~~--e-----el~~-m-----dg~GiIl~~eF~~~~l~~e~ 286 (407)
|....+...+|+.||++ .||..+-+.++.-|++||..+|. + ++++ | ..+|.|...+||..|..-+.
T Consensus 2249 Ee~L~EFs~~fkhFDke-k~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~afmi~~ET 2327 (2399)
T KOG0040|consen 2249 EEQLKEFSMMFKHFDKE-KNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYMAFMISKET 2327 (2399)
T ss_pred HHHHHHHHHHHHHhchh-hccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCCCcCcccHHHHHHHHHhccc
Confidence 44446889999999999 79999999999999999998853 2 2333 2 67999999999998875444
Q ss_pred ccCCCCCccccCccceeEEEee
Q 015398 287 SLGGLKDSTGLMGKKVFDLYHF 308 (407)
Q Consensus 287 s~~~~~~~~~~~~~~~F~lyhY 308 (407)
.- ++++. ...++|+-.+-
T Consensus 2328 eN--I~s~~--eIE~AfraL~a 2345 (2399)
T KOG0040|consen 2328 EN--ILSSE--EIEDAFRALDA 2345 (2399)
T ss_pred cc--ccchH--HHHHHHHHhhc
Confidence 21 12222 45566765554
No 69
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=64.72 E-value=11 Score=28.75 Aligned_cols=32 Identities=25% Similarity=0.380 Sum_probs=27.0
Q ss_pred HHHHHHHHHHhcCCCCCCcceehhhHHHHHHHh
Q 015398 222 RESHIRKAFDAQDKSGGGGFISVEGFQQVIRDT 254 (407)
Q Consensus 222 ~~~e~rraFd~fD~~~gnGfIs~~~L~~vL~~L 254 (407)
-++.+++.|+..|++ ++|.+.-+++.++.+.|
T Consensus 19 ~~~yA~~LFq~~D~s-~~g~Le~~Ef~~Fy~~L 50 (51)
T PF14788_consen 19 DDEYARQLFQECDKS-QSGRLEGEEFEEFYKRL 50 (51)
T ss_dssp -HHHHHHHHHHH-SS-SSSEBEHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhccc-CCCCccHHHHHHHHHHh
Confidence 346789999999999 79999999999998876
No 70
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=63.71 E-value=9 Score=26.54 Aligned_cols=27 Identities=30% Similarity=0.510 Sum_probs=23.1
Q ss_pred HHHHHHHHhcCCCCCCcceehhhHHHHH
Q 015398 224 SHIRKAFDAQDKSGGGGFISVEGFQQVI 251 (407)
Q Consensus 224 ~e~rraFd~fD~~~gnGfIs~~~L~~vL 251 (407)
+.++++|+.+|.+ ++|.|+.+++..++
T Consensus 36 ~~~~~~~~~~~~~-~~~~l~~~ef~~~~ 62 (63)
T cd00051 36 EEIDEMIREVDKD-GDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHHHhCCC-CCCeEeHHHHHHHh
Confidence 4678899999999 69999999987765
No 71
>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]
Probab=57.94 E-value=4.4 Score=43.20 Aligned_cols=78 Identities=22% Similarity=0.331 Sum_probs=50.8
Q ss_pred HHHHHHHHHHhcCCCCCCcceehhhHHHHHHHh------cC----------CCCHHHHhc-----c---cCCCceehHHH
Q 015398 222 RESHIRKAFDAQDKSGGGGFISVEGFQQVIRDT------NI----------RLPREKLDH-----L---CGSGFIVWSEF 277 (407)
Q Consensus 222 ~~~e~rraFd~fD~~~gnGfIs~~~L~~vL~~L------gl----------~l~~eel~~-----m---dg~GiIl~~eF 277 (407)
.+...+-||++||.+ |||=|+.+++..|..-. |. .... +++. . ++.|.+.++||
T Consensus 231 p~~~F~IAFKMFD~d-gnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~~~-~~nsaL~~yFFG~rg~~kLs~deF 308 (489)
T KOG2643|consen 231 PERNFRIAFKMFDLD-GNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSFKV-EVNSALLTYFFGKRGNGKLSIDEF 308 (489)
T ss_pred CcccceeeeeeeecC-CCCcccHHHHHHHHHHHHhccccceecccCccccceehh-hhhhhHHHHhhccCCCccccHHHH
Confidence 345677889999999 79999999999987421 11 1110 1111 1 89999999999
Q ss_pred HHHHhhhccccCCCCCccccCccceeEEEeeCCc
Q 015398 278 WQVILDLDKSLGGLKDSTGLMGKKVFDLYHFNGI 311 (407)
Q Consensus 278 ~~~~l~~e~s~~~~~~~~~~~~~~~F~lyhYNG~ 311 (407)
.+.+=.++.. ..+..|.=|+|+-.
T Consensus 309 ~~F~e~Lq~E----------il~lEF~~~~~~~~ 332 (489)
T KOG2643|consen 309 LKFQENLQEE----------ILELEFERFDKGDS 332 (489)
T ss_pred HHHHHHHHHH----------HHHHHHHHhCcccc
Confidence 9875444443 24455665555543
No 72
>KOG2427 consensus Uncharacterized conserved protein [Function unknown]
Probab=55.21 E-value=7.7 Score=40.74 Aligned_cols=37 Identities=30% Similarity=0.464 Sum_probs=29.5
Q ss_pred eeccCCCchhhHHHHHHH-HHHHH------------------HHHHHHHHHHHHHh
Q 015398 3 LVQHEGGPCGVLAAIQVI-LQFLI------------------LVALVKSMGEILFS 39 (407)
Q Consensus 3 LvQ~~GGPCgVlA~VQA~-LK~lL------------------~~~L~~Ala~IL~~ 39 (407)
|.|.+.|||.+||-.-+. ||..+ ..-|+.|++++.-+
T Consensus 30 llQn~nGpCpLiAl~NvLilk~~~~~~~~~~~~~~~~~~~lt~~~l~~~~~~~~~k 85 (391)
T KOG2427|consen 30 LLQNENGPCPLIALCNVLILKPNLTRPSNYLLVSVNDLPNLTLDELIEALAYNDEK 85 (391)
T ss_pred EEecCCCCcchHHHhHHHhccccccccchhhhhhhhccchhhHHHHHHhhhhhhcc
Confidence 689999999999999999 99887 35566666666554
No 73
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]
Probab=54.36 E-value=16 Score=39.83 Aligned_cols=44 Identities=32% Similarity=0.475 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHhcCCCCCCcceehhhHHHHHHHhcCCCCHHHHhc
Q 015398 221 ERESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDH 265 (407)
Q Consensus 221 ~~~~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~l~~eel~~ 265 (407)
-.+++++++|+.+|+. +|||||+=.++++|-..-..+.+.-+++
T Consensus 176 ~~~E~~~qafr~~d~~-~ng~is~Ldfq~imvt~~~h~lt~~v~~ 219 (694)
T KOG0751|consen 176 FQLEHAEQAFREKDKA-KNGFISVLDFQDIMVTIRIHLLTPFVEE 219 (694)
T ss_pred HHHHHHHHHHHHhccc-CCCeeeeechHhhhhhhhhhcCCHHHhh
Confidence 4557899999999999 7999999999999988776655555544
No 74
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]
Probab=52.52 E-value=7.6 Score=42.23 Aligned_cols=78 Identities=18% Similarity=0.218 Sum_probs=56.0
Q ss_pred HHHHHHHhcCCCCCCcceehhhHHHHHHHhcCCCC------HHHHhcc---cCCCceehHHHHHHHhhhccccCCCCCcc
Q 015398 225 HIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLP------REKLDHL---CGSGFIVWSEFWQVILDLDKSLGGLKDST 295 (407)
Q Consensus 225 e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~l~------~eel~~m---dg~GiIl~~eF~~~~l~~e~s~~~~~~~~ 295 (407)
..+.||..||.. ++|-+|.+...+|+..+++.-. .+-+..- +.--.+.|.||.+.+-+....
T Consensus 109 l~~~aFqlFDr~-~~~~vs~~~~~~if~~t~l~~~~~f~~d~efI~~~Fg~~~~r~~ny~~f~Q~lh~~~~E-------- 179 (694)
T KOG0751|consen 109 LFEVAFQLFDRL-GNGEVSFEDVADIFGQTNLHHHIPFNWDSEFIKLHFGDIRKRHLNYAEFTQFLHEFQLE-------- 179 (694)
T ss_pred HHHHHHHHhccc-CCCceehHHHHHHHhccccccCCCccCCcchHHHHhhhHHHHhccHHHHHHHHHHHHHH--------
Confidence 578999999999 7999999999999999988532 2333322 233467888888875443331
Q ss_pred ccCccceeEEEeeCCccc
Q 015398 296 GLMGKKVFDLYHFNGIAK 313 (407)
Q Consensus 296 ~~~~~~~F~lyhYNG~~~ 313 (407)
...++|+.++.+|++.
T Consensus 180 --~~~qafr~~d~~~ng~ 195 (694)
T KOG0751|consen 180 --HAEQAFREKDKAKNGF 195 (694)
T ss_pred --HHHHHHHHhcccCCCe
Confidence 2356888888887764
No 75
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=51.98 E-value=17 Score=26.81 Aligned_cols=30 Identities=20% Similarity=0.285 Sum_probs=25.3
Q ss_pred HHHHHHHHhcCCCCCCcceehhhHHHHHHHh
Q 015398 224 SHIRKAFDAQDKSGGGGFISVEGFQQVIRDT 254 (407)
Q Consensus 224 ~e~rraFd~fD~~~gnGfIs~~~L~~vL~~L 254 (407)
+++++.|+.+|.+ ++|.|+-+++-.++...
T Consensus 33 ~~~~~i~~~~d~~-~~g~i~~~ef~~~~~~~ 62 (67)
T cd00052 33 SVLAQIWDLADTD-KDGKLDKEEFAIAMHLI 62 (67)
T ss_pred HHHHHHHHHhcCC-CCCcCCHHHHHHHHHHH
Confidence 5688999999999 69999999988877654
No 76
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=47.38 E-value=27 Score=28.36 Aligned_cols=32 Identities=16% Similarity=0.382 Sum_probs=27.6
Q ss_pred HHHHHHHHhcCCCCCCcceehhhHHHHHHHhcC
Q 015398 224 SHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNI 256 (407)
Q Consensus 224 ~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl 256 (407)
+++++.|+.+|.+ ++|.|+-+++-.++..+..
T Consensus 52 ~~v~~i~~~~D~d-~~G~I~f~eF~~l~~~~~~ 83 (92)
T cd05025 52 DAVDKIMKELDEN-GDGEVDFQEFVVLVAALTV 83 (92)
T ss_pred HHHHHHHHHHCCC-CCCcCcHHHHHHHHHHHHH
Confidence 4689999999999 7999999999998887653
No 77
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=47.01 E-value=30 Score=39.66 Aligned_cols=64 Identities=23% Similarity=0.452 Sum_probs=51.8
Q ss_pred HHHHHHHHhcCCCCCCcceehhhHHHHHHHhcCCCCHHHHhcc------cCCCceehHHHHHHHhhhccccCC
Q 015398 224 SHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHL------CGSGFIVWSEFWQVILDLDKSLGG 290 (407)
Q Consensus 224 ~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~l~~eel~~m------dg~GiIl~~eF~~~~l~~e~s~~~ 290 (407)
-+.+..|+.+|++ -+||+|..+-+.+|-.-++ ++..|..+ |++|.+.=+||.-.|+=.++...|
T Consensus 195 lKY~QlFNa~Dkt-rsG~Lsg~qaR~aL~qS~L--pq~~LA~IW~LsDvd~DGkL~~dEfilam~liema~sG 264 (1118)
T KOG1029|consen 195 LKYRQLFNALDKT-RSGYLSGQQARSALGQSGL--PQNQLAHIWTLSDVDGDGKLSADEFILAMHLIEMAKSG 264 (1118)
T ss_pred hHHHHHhhhcccc-cccccccHHHHHHHHhcCC--chhhHhhheeeeccCCCCcccHHHHHHHHHHHHHHhcC
Confidence 3678899999999 7999999999999876665 56666554 999999999998887766665433
No 78
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=45.69 E-value=29 Score=28.36 Aligned_cols=31 Identities=13% Similarity=0.225 Sum_probs=26.2
Q ss_pred HHHHHHHHhcCCCCCCcceehhhHHHHHHHhc
Q 015398 224 SHIRKAFDAQDKSGGGGFISVEGFQQVIRDTN 255 (407)
Q Consensus 224 ~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lg 255 (407)
+++++.|+.+|.+ ++|+|+-+++-.+|..+.
T Consensus 44 ~ev~~i~~~~d~~-~~g~I~~~eF~~~~~~~~ 74 (96)
T smart00027 44 TLLAKIWNLADID-NDGELDKDEFALAMHLIY 74 (96)
T ss_pred HHHHHHHHHhcCC-CCCCcCHHHHHHHHHHHH
Confidence 4688999999999 699999999988877643
No 79
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=43.82 E-value=17 Score=31.53 Aligned_cols=52 Identities=17% Similarity=0.257 Sum_probs=34.3
Q ss_pred HHHHHHHHhcCCCCCCcceehhhHHHHHHHhcCCCCHH-HHhc------ccCCCceehHHHHH
Q 015398 224 SHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPRE-KLDH------LCGSGFIVWSEFWQ 279 (407)
Q Consensus 224 ~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~l~~e-el~~------mdg~GiIl~~eF~~ 279 (407)
..+.=-|...|.+ +||+++-.+|..+.+.| .+.+ -+.. .+++|.|.+.|+..
T Consensus 54 ~~~~W~F~~LD~n-~d~~L~~~El~~l~~~l---~~~e~C~~~F~~~CD~n~d~~Is~~EW~~ 112 (113)
T PF10591_consen 54 RVVHWKFCQLDRN-KDGVLDRSELKPLRRPL---MPPEHCARPFFRSCDVNKDGKISLDEWCN 112 (113)
T ss_dssp HHHHHHHHHH--T--SSEE-TTTTGGGGSTT---STTGGGHHHHHHHH-TT-SSSEEHHHHHH
T ss_pred hhhhhhHhhhcCC-CCCccCHHHHHHHHHHH---hhhHHHHHHHHHHcCCCCCCCCCHHHHcc
Confidence 3455569999999 79999999999987766 2222 1222 27899999999864
No 80
>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=43.61 E-value=30 Score=38.42 Aligned_cols=59 Identities=17% Similarity=0.358 Sum_probs=48.1
Q ss_pred HHHHHhcCCCCCCcceehhhHHHHHHHhcCCCCHHHHhcc-----c-CCCceehHHHHHHHhhhcc
Q 015398 227 RKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHL-----C-GSGFIVWSEFWQVILDLDK 286 (407)
Q Consensus 227 rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~l~~eel~~m-----d-g~GiIl~~eF~~~~l~~e~ 286 (407)
+..|...|.+ ..||++.+.+.++|++-+.+.+++.+++. + -.|.+..+||++.|....+
T Consensus 596 ~~rf~~lD~~-k~~~~~i~~v~~vlk~~~~~~d~~~~~~~l~ea~~~~~g~v~l~e~~q~~s~~~~ 660 (680)
T KOG0042|consen 596 KTRFAFLDAD-KKAYQAIADVLKVLKSENVGWDEDRLHEELQEADENLNGFVELREFLQLMSAIKN 660 (680)
T ss_pred HHHHHhhcch-HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhcceeeHHHHHHHHHHHhc
Confidence 3679999998 68999999999999999988888665443 2 3899999999998865443
No 81
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=43.10 E-value=34 Score=28.18 Aligned_cols=32 Identities=9% Similarity=0.201 Sum_probs=27.2
Q ss_pred HHHHHHHHhcCCCCCCcceehhhHHHHHHHhcC
Q 015398 224 SHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNI 256 (407)
Q Consensus 224 ~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl 256 (407)
.++.+.++..|.+ ++|.|+-+++-.+|..|-+
T Consensus 53 ~~v~~i~~elD~n-~dG~Idf~EF~~l~~~l~~ 84 (93)
T cd05026 53 MLVDKIMNDLDSN-KDNEVDFNEFVVLVAALTV 84 (93)
T ss_pred HHHHHHHHHhCCC-CCCCCCHHHHHHHHHHHHH
Confidence 3688889999999 7999999999998887754
No 82
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=42.10 E-value=64 Score=30.56 Aligned_cols=65 Identities=9% Similarity=0.218 Sum_probs=43.1
Q ss_pred ccccccCCCCCCCceEEEee--CCce--EEEEecCcCccccchHHHHHHHHHHHHHhcCCCCCCcceehhhHHHHHHH
Q 015398 180 FCKVGQHLKCPKWPIWVVGS--ESHY--TVLFALDTSVQDENELEERESHIRKAFDAQDKSGGGGFISVEGFQQVIRD 253 (407)
Q Consensus 180 ~~~VGs~lK~P~~PIWv~~s--~~hy--sVLF~~~~~l~~~~~~~~~~~e~rraFd~fD~~~gnGfIs~~~L~~vL~~ 253 (407)
|.+.-+.+..|.+||.|-+. .-|= |=-+-.+-+. .-++.+++|..|+++ +.+.+|..++.++++.
T Consensus 56 y~T~~~w~p~P~f~Iyi~nIhk~kHGSDSg~YD~eGrF--------vp~kFe~iF~kya~~-~~d~LT~~E~~~m~~~ 124 (174)
T PF05042_consen 56 YPTQPSWIPDPFFRIYIKNIHKGKHGSDSGAYDTEGRF--------VPQKFEEIFSKYAKT-GPDALTLRELWRMLKG 124 (174)
T ss_pred CccCCCCCCCCceeEEeecccccccCCCccccccCCcC--------CHHHHHHHHHHhCCC-CCCCcCHHHHHHHHHh
Confidence 34445688999999999652 1110 1112222222 225899999999998 5789999999888875
No 83
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=39.97 E-value=42 Score=26.76 Aligned_cols=30 Identities=17% Similarity=0.263 Sum_probs=26.5
Q ss_pred HHHHHHHHhcCCCCCCcceehhhHHHHHHHh
Q 015398 224 SHIRKAFDAQDKSGGGGFISVEGFQQVIRDT 254 (407)
Q Consensus 224 ~e~rraFd~fD~~~gnGfIs~~~L~~vL~~L 254 (407)
+++++.|+.+|.+ ++|.|+-+++-.+|..+
T Consensus 51 ~ei~~i~~~~d~~-~~g~I~f~eF~~~~~~~ 80 (88)
T cd00213 51 EAVDKIMKDLDVN-KDGKVDFQEFLVLIGKL 80 (88)
T ss_pred HHHHHHHHHhccC-CCCcCcHHHHHHHHHHH
Confidence 5788999999999 69999999999888765
No 84
>PLN02230 phosphoinositide phospholipase C 4
Probab=38.13 E-value=1.2e+02 Score=33.81 Aligned_cols=79 Identities=10% Similarity=0.201 Sum_probs=53.8
Q ss_pred ceEEEEecCcCccccchHHHHHHHHHHHHHhcCCCCCCcceehhhHHHHHHHhc-C--CCCHHHHhcc------------
Q 015398 202 HYTVLFALDTSVQDENELEERESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTN-I--RLPREKLDHL------------ 266 (407)
Q Consensus 202 hysVLF~~~~~l~~~~~~~~~~~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lg-l--~l~~eel~~m------------ 266 (407)
+|.|-||..+....... ..-.+++++|..|-.+ +++++.++|.+.|++-. . ..+.++.+.+
T Consensus 9 ~~~~~~~~~~~~~~~~~--~p~~ei~~lf~~~s~~--~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~~i~~~~~~~~~~~~ 84 (598)
T PLN02230 9 SYKFCLIFTRKFRMTES--GPVADVRDLFEKYADG--DAHMSPEQLQKLMAEEGGGEGETSLEEAERIVDEVLRRKHHIA 84 (598)
T ss_pred cceEEEEecCccccccC--CCcHHHHHHHHHHhCC--CCccCHHHHHHHHHHhCCCcccCCHHHHHHHHHHHHhhccccc
Confidence 88999888776543311 1225899999999643 58999999999999866 2 2343333222
Q ss_pred -cCCCceehHHHHHHHhhh
Q 015398 267 -CGSGFIVWSEFWQVILDL 284 (407)
Q Consensus 267 -dg~GiIl~~eF~~~~l~~ 284 (407)
.+.+.+..+.|...++..
T Consensus 85 ~~~~~~~~~~~F~~yL~s~ 103 (598)
T PLN02230 85 KFTRRNLTLDDFNYYLFST 103 (598)
T ss_pred cccccccCHHHHHHHHcCc
Confidence 124569999998877653
No 85
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=37.59 E-value=49 Score=27.00 Aligned_cols=32 Identities=25% Similarity=0.406 Sum_probs=27.4
Q ss_pred HHHHHHHHHhcCCCCCCcceehhhHHHHHHHhc
Q 015398 223 ESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTN 255 (407)
Q Consensus 223 ~~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lg 255 (407)
++++.+.|+.+|.+ ++|-|+-+++-++|..+.
T Consensus 50 ~~~v~~i~~~~D~d-~dG~I~f~eF~~~~~~~~ 81 (88)
T cd05030 50 QKAIDKIFEDLDTN-QDGQLSFEEFLVLVIKVG 81 (88)
T ss_pred HHHHHHHHHHcCCC-CCCcCcHHHHHHHHHHHH
Confidence 35789999999999 699999999998887664
No 86
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=37.57 E-value=37 Score=29.68 Aligned_cols=27 Identities=22% Similarity=0.335 Sum_probs=24.2
Q ss_pred HHHHHHHHhcCCCCCCcceehhhHHHHH
Q 015398 224 SHIRKAFDAQDKSGGGGFISVEGFQQVI 251 (407)
Q Consensus 224 ~e~rraFd~fD~~~gnGfIs~~~L~~vL 251 (407)
..+.+.|+.+|.+ ++|+||.+++...+
T Consensus 80 ~~~~~f~~~~D~n-~Dg~IS~~Ef~~cl 106 (116)
T cd00252 80 HCIKPFFESCDLD-KDGSISLDEWCYCF 106 (116)
T ss_pred HHHHHHHHHHCCC-CCCCCCHHHHHHHH
Confidence 4678899999999 79999999999987
No 87
>KOG2243 consensus Ca2+ release channel (ryanodine receptor) [Signal transduction mechanisms]
Probab=35.81 E-value=40 Score=41.21 Aligned_cols=56 Identities=20% Similarity=0.403 Sum_probs=44.3
Q ss_pred HHHhcCCCCCCcceehhhHHHHHHHhcCC-CCHHHHhcc------cCCCceehHHHHHHHhhhccc
Q 015398 229 AFDAQDKSGGGGFISVEGFQQVIRDTNIR-LPREKLDHL------CGSGFIVWSEFWQVILDLDKS 287 (407)
Q Consensus 229 aFd~fD~~~gnGfIs~~~L~~vL~~Lgl~-l~~eel~~m------dg~GiIl~~eF~~~~l~~e~s 287 (407)
.|+-||++ |.|.|+-.++++.|+. -+ -++.|++-+ |.....+|++|.+.|-.--++
T Consensus 4062 tfkeydpd-gkgiiskkdf~kame~--~k~ytqse~dfllscae~dend~~~y~dfv~rfhepakd 4124 (5019)
T KOG2243|consen 4062 TFKEYDPD-GKGIISKKDFHKAMEG--HKHYTQSEIDFLLSCAEADENDMFDYEDFVDRFHEPAKD 4124 (5019)
T ss_pred cchhcCCC-CCccccHHHHHHHHhc--cccchhHHHHHHHHhhccCccccccHHHHHHHhcCchhh
Confidence 48899999 7999999999999873 33 566777665 778899999999887544443
No 88
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=35.59 E-value=54 Score=26.99 Aligned_cols=32 Identities=9% Similarity=0.242 Sum_probs=26.8
Q ss_pred HHHHHHHHhcCCCCCCcceehhhHHHHHHHhcC
Q 015398 224 SHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNI 256 (407)
Q Consensus 224 ~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl 256 (407)
+++.+.|+..|.+ ++|.|+-+++-.+|..|.+
T Consensus 51 ~ev~~m~~~~D~d-~dG~Idf~EFv~lm~~l~~ 82 (88)
T cd05029 51 AEIAKLMEDLDRN-KDQEVNFQEYVTFLGALAL 82 (88)
T ss_pred HHHHHHHHHhcCC-CCCCCcHHHHHHHHHHHHH
Confidence 4788889999999 7999999999888876644
No 89
>KOG2871 consensus Uncharacterized conserved protein [Function unknown]
Probab=33.83 E-value=19 Score=37.86 Aligned_cols=137 Identities=19% Similarity=0.080 Sum_probs=77.3
Q ss_pred chhHHHHHHHHHhcchhHHhh-cCCCCCCCcccCCCCcchHHhhhhhhcCcccccccCCceecCCceeeeccccCcceee
Q 015398 93 MGAMLFLISALLSRGLDYVQA-DRDDPTPSLVTAPFGHASQEIVNLLLCGQAVPNVFDGRMDLGGGMCLKGISTSVEVGF 171 (407)
Q Consensus 93 ~GvllFLySvILSRGie~V~~-dmd~p~~~Li~~~~G~csQeLVNLLLTGrAvsnVfdg~~~~gg~~~l~Gi~~rs~iGf 171 (407)
+|-..++-=++--|-+-+|-+ ++|.....| +|-|-|.-|- +||+--. +|= +.||=
T Consensus 218 ~gsq~iVnLLLtGrAvpnV~dg~~dvggm~l----~gI~e~~dvg-fltlle~---l~~----------------ckvgs 273 (449)
T KOG2871|consen 218 HGSQSIVNLLLTGRAVPNVWDGVVDVGGMKL----YGIPEQGDVG-FLTLLEL---LRY----------------CKVGS 273 (449)
T ss_pred cchHHHHHHHHccccccccccCccccCccee----eccccccchh-HHHHHHH---HHH----------------HHHHH
Confidence 455555544455688888855 667665555 4545555444 3332111 000 01110
Q ss_pred eeecccCCccccccCCCCCCCceEEEeeCCceEEEEecCcCccccchHHHHHHHHHHHHHhcCCCCCCcce--------e
Q 015398 172 LTLLESLNFCKVGQHLKCPKWPIWVVGSESHYTVLFALDTSVQDENELEERESHIRKAFDAQDKSGGGGFI--------S 243 (407)
Q Consensus 172 Lt~~E~~~~~~VGs~lK~P~~PIWv~~s~~hysVLF~~~~~l~~~~~~~~~~~e~rraFd~fD~~~gnGfI--------s 243 (407)
-+.+ --++++.+|+|.+|+|+..++.|+.+-|..+.++. |..+++.-|+--+.++ +|+= +
T Consensus 274 --~lk~--pr~Piwv~gSeth~tvlfs~d~~l~~~~~~s~q~r-------R~f~a~d~~d~nfis~-s~~~~vm~~~N~~ 341 (449)
T KOG2871|consen 274 --ALKQ--PRQPIWVLGSETHLTVLFSCDGHLVVPENPSEQLR-------RNFHAYDPEDNNFISC-SGLQIVMTALNRL 341 (449)
T ss_pred --hhcC--CCCceeEecCCCceEEEEecCccccCCCCCCHHHH-------hhhhccCccCCCeeec-HHHHHHHHHhccc
Confidence 0111 12689999999999999999999999999876542 3344444454444442 4432 3
Q ss_pred hhhHHHHHHHhcCCCCHHHHhcc
Q 015398 244 VEGFQQVIRDTNIRLPREKLDHL 266 (407)
Q Consensus 244 ~~~L~~vL~~Lgl~l~~eel~~m 266 (407)
.++...|+ ..+..+++|-+..+
T Consensus 342 vse~a~v~-l~~~~l~pE~~~ii 363 (449)
T KOG2871|consen 342 VSEPAYVM-LMRQPLDPESLGII 363 (449)
T ss_pred ccCHHHHH-HhcCccChhhcceE
Confidence 33444443 34566788876543
No 90
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=29.57 E-value=1e+02 Score=32.31 Aligned_cols=58 Identities=14% Similarity=0.097 Sum_probs=43.4
Q ss_pred HHHHHHHHhcCCCCCCcceehhhHHHHHHH-hcCC-CC-HHHHhcc--cCCCceehHHHHHHHh
Q 015398 224 SHIRKAFDAQDKSGGGGFISVEGFQQVIRD-TNIR-LP-REKLDHL--CGSGFIVWSEFWQVIL 282 (407)
Q Consensus 224 ~e~rraFd~fD~~~gnGfIs~~~L~~vL~~-Lgl~-l~-~eel~~m--dg~GiIl~~eF~~~~l 282 (407)
..++-+|++|+-. .+|++....|.-+|+. ||+. ++ +.....+ ..+|.|-+++|.+.+.
T Consensus 296 ~iiq~afk~f~v~-eDg~~ge~~ls~ilq~~lgv~~l~v~~lf~~i~q~d~~ki~~~~f~~fa~ 358 (412)
T KOG4666|consen 296 VIIQYAFKRFSVA-EDGISGEHILSLILQVVLGVEVLRVPVLFPSIEQKDDPKIYASNFRKFAA 358 (412)
T ss_pred HHHHHHHHhcccc-cccccchHHHHHHHHHhcCcceeeccccchhhhcccCcceeHHHHHHHHH
Confidence 4789999999999 6999999999999987 6663 11 1111222 5688999999987754
No 91
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=29.34 E-value=80 Score=35.99 Aligned_cols=65 Identities=26% Similarity=0.423 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHhcCCCCCCcceehhhHHHHHHHhcCCCCHHHHhcc------cCCCceehHHHHHHHhhhcc
Q 015398 221 ERESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHL------CGSGFIVWSEFWQVILDLDK 286 (407)
Q Consensus 221 ~~~~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~l~~eel~~m------dg~GiIl~~eF~~~~l~~e~ 286 (407)
.++.-+...|+..|++ .+|-++..+..+.++.++..+...+...+ .++|.+-+++|.+.+....+
T Consensus 133 ~~~~wi~~~~~~ad~~-~~~~~~~~~~~~~~~~~n~~l~~~~~~~~f~e~~~~~~~k~~~~~~~~~~~~~~~ 203 (746)
T KOG0169|consen 133 RREHWIHSIFQEADKN-KNGHMSFDEVLDLLKQLNVQLSESKARRLFKESDNSQTGKLEEEEFVKFRKELTK 203 (746)
T ss_pred hHHHHHHHHHHHHccc-cccccchhhHHHHHHHHHHhhhHHHHHHHHHHHHhhccceehHHHHHHHHHhhcc
Confidence 3445688889999999 79999999999999999999888665443 57788888888777554433
No 92
>PF12896 Apc4: Anaphase-promoting complex, cyclosome, subunit 4; InterPro: IPR024790 Apc4 is one of the larger of the subunits of the anaphase-promoting complex (APC) or cyclosome. The anaphase-promoting complex is a multiprotein subunit E3 ubiquitin ligase complex that controls segregation of chromosomes and exit from mitosis in eukaryotes [, ]. Results in Caenorhabditis elegans show that the primary essential role of the spindle assembly checkpoint is not in the chromosome segregation process itself but rather in delaying anaphase onset until all chromosomes are properly attached to the spindle. The APC is likely to be required for all metaphase-to-anaphase transitions in a multicellular organism []. This entry represents the long domain downstream of the WD40 repeat/s that are present on the Apc4 subunits.
Probab=27.61 E-value=55 Score=30.43 Aligned_cols=68 Identities=19% Similarity=0.296 Sum_probs=43.5
Q ss_pred ccCCHHHHHHHHHHhchhhcCCchhHHHHHHHHHhcchhHHhhcCCCCCCCcccCCCCcchHHhhhhhhcCccccccc
Q 015398 71 AYTSQATALQKLEEALPVFRSRMGAMLFLISALLSRGLDYVQADRDDPTPSLVTAPFGHASQEIVNLLLCGQAVPNVF 148 (407)
Q Consensus 71 ~~~s~~~l~~~l~~~i~~f~~~~GvllFLySvILSRGie~V~~dmd~p~~~Li~~~~G~csQeLVNLLLTGrAvsnVf 148 (407)
.++.+..+..++.+++........-..-.+ .|-+.++.+++.+. + ..+-..++|.+|++||.+.+.+-
T Consensus 25 ~~~~i~~ll~yi~~~l~~i~~~w~~~~~~~----~~~l~~~~~~l~~~-----~-~~~~~~~el~~lLltG~~s~~l~ 92 (210)
T PF12896_consen 25 KSSQIQSLLRYIKDTLDAIQEEWEEALQEF----DRKLTNLADELQEK-----G-GEGSLQDELLDLLLTGHASPALK 92 (210)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHhc-----C-CCCcHHHHHHHHHHhcCCCHHHH
Confidence 345667778888888776665432221111 55556666554432 2 24556889999999999998663
No 93
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=27.04 E-value=92 Score=25.68 Aligned_cols=31 Identities=13% Similarity=0.267 Sum_probs=26.5
Q ss_pred HHHHHHHHhcCCCCCCcceehhhHHHHHHHhc
Q 015398 224 SHIRKAFDAQDKSGGGGFISVEGFQQVIRDTN 255 (407)
Q Consensus 224 ~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lg 255 (407)
.++.+.|+.+|.+ ++|-|+-+++-.+|..|-
T Consensus 52 ~~~~~ll~~~D~d-~DG~I~f~EF~~l~~~l~ 82 (89)
T cd05023 52 GVLDRMMKKLDLN-SDGQLDFQEFLNLIGGLA 82 (89)
T ss_pred HHHHHHHHHcCCC-CCCcCcHHHHHHHHHHHH
Confidence 4688889999999 799999999988888764
No 94
>PLN02228 Phosphoinositide phospholipase C
Probab=25.44 E-value=2.3e+02 Score=31.51 Aligned_cols=82 Identities=12% Similarity=0.308 Sum_probs=54.9
Q ss_pred CCceEEEEecCcCccccchHHHHHHHHHHHHHhcCCCCCCcceehhhHHHHHHHhcCC--CCHHHHhcc----------c
Q 015398 200 ESHYTVLFALDTSVQDENELEERESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIR--LPREKLDHL----------C 267 (407)
Q Consensus 200 ~~hysVLF~~~~~l~~~~~~~~~~~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~--l~~eel~~m----------d 267 (407)
+.+|.|-||.-+...-...+ .-.+++++|..|-. ++.++.++|...|++..-. .+.+..+++ .
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~--~~~ei~~if~~~s~---~~~~t~~~~~~FL~~~Q~~~~~~~~~~~~i~~~~~~~~~~~ 76 (567)
T PLN02228 2 SESFKVCFCCSRSFKEKTRE--PPVSIKRLFEAYSR---NGKMSFDELLRFVSEVQGERHAGLDYVQDIFHSVKHHNVFH 76 (567)
T ss_pred CccceEEEEeCCcCCcCCCC--CcHHHHHHHHHhcC---CCccCHHHHHHHHHHhcCCccCCHHHHHHHHHHhccchhhc
Confidence 46889998877654332110 22578999988754 3689999999999987532 333433333 1
Q ss_pred CCCceehHHHHHHHhhhcc
Q 015398 268 GSGFIVWSEFWQVILDLDK 286 (407)
Q Consensus 268 g~GiIl~~eF~~~~l~~e~ 286 (407)
..|.+..+.|...++..+.
T Consensus 77 ~~~~~~~~gF~~yl~s~~n 95 (567)
T PLN02228 77 HHGLVHLNAFYRYLFSDTN 95 (567)
T ss_pred ccCccCHHHHHHHhcCccc
Confidence 4578999999988876543
No 95
>PLN02222 phosphoinositide phospholipase C 2
Probab=25.06 E-value=1.7e+02 Score=32.53 Aligned_cols=82 Identities=13% Similarity=0.299 Sum_probs=55.7
Q ss_pred CCceEEEEecCcCccccchHHHHHHHHHHHHHhcCCCCCCcceehhhHHHHHHHhcCC--CCHHHHhcc-------cCCC
Q 015398 200 ESHYTVLFALDTSVQDENELEERESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIR--LPREKLDHL-------CGSG 270 (407)
Q Consensus 200 ~~hysVLF~~~~~l~~~~~~~~~~~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~--l~~eel~~m-------dg~G 270 (407)
..+|.|-||.++...-.... .-.+++++|..|-. +++++.++|.+.|+.-.-. .+.+..+.+ ...+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~--~~~ei~~if~~~~~---~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~ii~~~~~~~~~~ 77 (581)
T PLN02222 3 KQTYKVCFCFRRRFRYTASE--APREIKTIFEKYSE---NGVMTVDHLHRFLIDVQKQDKATREDAQSIINSASSLLHRN 77 (581)
T ss_pred ccceeEEEEeccccccccCC--CcHHHHHHHHHhcC---CCCcCHHHHHHHHHHhcCCccCCHHHHHHHHHhhhhhhhcc
Confidence 45788888877754332111 12478999999753 4799999999999886543 345544332 2466
Q ss_pred ceehHHHHHHHhhhcc
Q 015398 271 FIVWSEFWQVILDLDK 286 (407)
Q Consensus 271 iIl~~eF~~~~l~~e~ 286 (407)
.+.++.|...++..+.
T Consensus 78 ~~~~~gF~~yL~s~~n 93 (581)
T PLN02222 78 GLHLDAFFKYLFGDNN 93 (581)
T ss_pred CcCHHHHHHHhcCCCC
Confidence 7999999988876443
No 96
>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]
Probab=24.48 E-value=1.9e+02 Score=31.33 Aligned_cols=58 Identities=24% Similarity=0.258 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHhcCCCCCCcceehhhHHHHHHHhcCCCCHHH---Hhcc------cCCCceehHHHHHH
Q 015398 221 ERESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREK---LDHL------CGSGFIVWSEFWQV 280 (407)
Q Consensus 221 ~~~~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~l~~ee---l~~m------dg~GiIl~~eF~~~ 280 (407)
..++.++..|..||+. .+|.|+...+.++|-+.-..-.+.. ++.. ++- -|.++||.+.
T Consensus 315 Lq~Eil~lEF~~~~~~-~~g~Ise~DFA~~lL~~a~~n~~~k~~~lkrvk~kf~~~~~-gISl~Ef~~F 381 (489)
T KOG2643|consen 315 LQEEILELEFERFDKG-DSGAISEVDFAELLLAYAGVNSKKKHKYLKRVKEKFKDDGK-GISLQEFKAF 381 (489)
T ss_pred HHHHHHHHHHHHhCcc-cccccCHHHHHHHHHHHcccchHhHHHHHHHHHHhccCCCC-CcCHHHHHHH
Confidence 3445667779999998 6899999999999887654433322 2222 233 4788888765
No 97
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=23.81 E-value=1.1e+02 Score=25.47 Aligned_cols=31 Identities=16% Similarity=0.248 Sum_probs=26.6
Q ss_pred HHHHHHHHhcCCCCCCcceehhhHHHHHHHhc
Q 015398 224 SHIRKAFDAQDKSGGGGFISVEGFQQVIRDTN 255 (407)
Q Consensus 224 ~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lg 255 (407)
+.+++.|+..|.+ ++|-|+-+++-.+|..|-
T Consensus 47 ~~v~~mi~~~D~d-~DG~I~F~EF~~l~~~l~ 77 (89)
T cd05022 47 EGLEEKMKNLDVN-QDSKLSFEEFWELIGELA 77 (89)
T ss_pred HHHHHHHHHhCCC-CCCCCcHHHHHHHHHHHH
Confidence 4688999999999 799999999988887663
No 98
>PRK13778 paaA phenylacetate-CoA oxygenase subunit PaaA; Provisional
Probab=22.97 E-value=72 Score=32.78 Aligned_cols=36 Identities=28% Similarity=0.314 Sum_probs=26.9
Q ss_pred hHHHHHHHhcCCCCHHHHhccc-----CCCceehHHHHHHH
Q 015398 246 GFQQVIRDTNIRLPREKLDHLC-----GSGFIVWSEFWQVI 281 (407)
Q Consensus 246 ~L~~vL~~Lgl~l~~eel~~md-----g~GiIl~~eF~~~~ 281 (407)
....+|+++|+.+|+..+.-=+ .-|-|+|+||++++
T Consensus 240 ~v~~~l~~~gL~vP~~~~~~~e~~~~~~~~~~~w~~~~~~~ 280 (314)
T PRK13778 240 ATVPQAEVLGLTLPDPDLRWNEERGHYDFGEIDWDEFKEVI 280 (314)
T ss_pred HHHHHHHHcCCCCCCCcCCcccccCCcCCCCCCHHHHHHHH
Confidence 4567889999999876554221 24789999999887
No 99
>PRK11409 antitoxin YefM; Provisional
Probab=22.54 E-value=67 Score=26.38 Aligned_cols=34 Identities=21% Similarity=0.334 Sum_probs=26.0
Q ss_pred eeccCCCchhhHHHHHHH--HHHHH--------HHHHHHHHHHH
Q 015398 3 LVQHEGGPCGVLAAIQVI--LQFLI--------LVALVKSMGEI 36 (407)
Q Consensus 3 LvQ~~GGPCgVlA~VQA~--LK~lL--------~~~L~~Ala~I 36 (407)
+|.++|+|..|+.+...| ++.-| .+-|.+|+.++
T Consensus 28 ~ITr~g~~~~Vl~S~~~yesl~Etl~ll~~p~~~~~l~~~i~~~ 71 (83)
T PRK11409 28 LITRQNGEACVLMSLEEYNSLEETAYLLRSPANARRLMDSIDSL 71 (83)
T ss_pred EEEeCCCCCEEEEeHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 467889999999999999 77544 44566777763
No 100
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=22.33 E-value=80 Score=33.26 Aligned_cols=27 Identities=26% Similarity=0.288 Sum_probs=24.5
Q ss_pred HHHHHHhcCCCCCCcceehhhHHHHHHH
Q 015398 226 IRKAFDAQDKSGGGGFISVEGFQQVIRD 253 (407)
Q Consensus 226 ~rraFd~fD~~~gnGfIs~~~L~~vL~~ 253 (407)
++..|+.+|.+ ++|.|+.+++.++++.
T Consensus 359 ~~~~F~~~D~d-~DG~Is~eEf~~~~~~ 385 (391)
T PRK12309 359 SDAVFDALDLN-HDGKITPEEMRAGLGA 385 (391)
T ss_pred HHHHHHHhCCC-CCCCCcHHHHHHHHHH
Confidence 57889999999 7999999999998875
No 101
>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]
Probab=21.55 E-value=2.2e+02 Score=31.00 Aligned_cols=79 Identities=20% Similarity=0.207 Sum_probs=55.6
Q ss_pred HHhcCCCCCCcceehhhHHHHHHHhcCCCCHHHHhcc----------cCCCceehHHHHHHHhhhccccCCCCCccccCc
Q 015398 230 FDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHL----------CGSGFIVWSEFWQVILDLDKSLGGLKDSTGLMG 299 (407)
Q Consensus 230 Fd~fD~~~gnGfIs~~~L~~vL~~Lgl~l~~eel~~m----------dg~GiIl~~eF~~~~l~~e~s~~~~~~~~~~~~ 299 (407)
|-..|++ -+|+|+.+.|...=. -.++.--++.+ -..|.|+|++|+...+.+++.. ++..+
T Consensus 284 FweLD~D-hd~lidk~~L~ry~d---~tlt~~ivdRIFs~v~r~~~~~~eGrmdykdFv~FilA~e~k~------t~~Sl 353 (493)
T KOG2562|consen 284 FWELDTD-HDGLIDKEDLKRYGD---HTLTERIVDRIFSQVPRGFTVKVEGRMDYKDFVDFILAEEDKD------TPASL 353 (493)
T ss_pred Hhhhccc-cccccCHHHHHHHhc---cchhhHHHHHHHhhccccceeeecCcccHHHHHHHHHHhccCC------Cccch
Confidence 6777888 688888888876522 12332223333 4689999999999999888742 23356
Q ss_pred cceeEEEeeCCcccccCCC
Q 015398 300 KKVFDLYHFNGIAKSDLNG 318 (407)
Q Consensus 300 ~~~F~lyhYNG~~~s~~~~ 318 (407)
.==|++.|-+|.|.-+.+.
T Consensus 354 eYwFrclDld~~G~Lt~~e 372 (493)
T KOG2562|consen 354 EYWFRCLDLDGDGILTLNE 372 (493)
T ss_pred hhheeeeeccCCCcccHHH
Confidence 6689999999999766555
No 102
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=21.43 E-value=1.4e+02 Score=25.34 Aligned_cols=60 Identities=13% Similarity=0.112 Sum_probs=34.8
Q ss_pred HHHHHHHHHhcCCCCCCcceehhhHHHHHHHh-------cCCCCHHHHhc----c----cCCCceehHHHHHHHhhh
Q 015398 223 ESHIRKAFDAQDKSGGGGFISVEGFQQVIRDT-------NIRLPREKLDH----L----CGSGFIVWSEFWQVILDL 284 (407)
Q Consensus 223 ~~e~rraFd~fD~~~gnGfIs~~~L~~vL~~L-------gl~l~~eel~~----m----dg~GiIl~~eF~~~~l~~ 284 (407)
+++.|..|+...- .||.|+-..|+..|+++ |+..+=-.++. . ...-.|.-++|++.++.+
T Consensus 2 ~dKyRylFslisd--~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~~e~sv~sCF~~~~~~~~I~~~~Fl~wl~~e 76 (90)
T PF09069_consen 2 EDKYRYLFSLISD--SNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGYIEPSVRSCFQQVQLSPKITENQFLDWLMSE 76 (90)
T ss_dssp HHHHHHHHHHHS---TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT--HHHHHHHHHHTTT-S-B-HHHHHHHHHT-
T ss_pred hHHHHHHHHHHcC--CCCCCcHHHHHHHHHHHHHHHHHhCccccccCcHHHHHHHhcccCCCCccCHHHHHHHHHhC
Confidence 4689999999944 58999999999988863 33211111111 1 236678889999888765
No 103
>KOG1955 consensus Ral-GTPase effector RALBP1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=21.39 E-value=1.6e+02 Score=32.49 Aligned_cols=59 Identities=29% Similarity=0.424 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHhcCCCCCCcceehhhHHHHHHHhcCCCCHHHHhcc------cCCCceehHHHHHHHh
Q 015398 220 EERESHIRKAFDAQDKSGGGGFISVEGFQQVIRDTNIRLPREKLDHL------CGSGFIVWSEFWQVIL 282 (407)
Q Consensus 220 ~~~~~e~rraFd~fD~~~gnGfIs~~~L~~vL~~Lgl~l~~eel~~m------dg~GiIl~~eF~~~~l 282 (407)
|++++ ..+-|+..-+| -+|||+-..-+.++..-- ++-+||..+ +.+|-+.++||...|-
T Consensus 228 EQReY-YvnQFrtvQpD-p~gfisGsaAknFFtKSk--lpi~ELshIWeLsD~d~DGALtL~EFcAAfH 292 (737)
T KOG1955|consen 228 EQREY-YVNQFRTVQPD-PHGFISGSAAKNFFTKSK--LPIEELSHIWELSDVDRDGALTLSEFCAAFH 292 (737)
T ss_pred HHHHH-HHhhhhcccCC-cccccccHHHHhhhhhcc--CchHHHHHHHhhcccCccccccHHHHHhhHh
Confidence 44433 34558998899 699999999999887544 455666655 8999999999999873
No 104
>PF11628 TCR_zetazeta: T-cell surface glycoprotein CD3 zeta chain; InterPro: IPR021663 The TCR complex of T-lymphocytes consists of either a TCR alpha/beta or TCR gamma/delta heterodimer co-expressed at the cell surface with the invariant subunits of CD3 labelled gamma, delta, epsilon, zeta, and eta []. The zeta subunit forms either homodimers or heterodimers with eta [], but eta homodimers have not been observed. The structure of the zetazeta transmembrane dimer consists of a left-handed coiled coil with polar contacts. Two aspartic acids are critical for zetazeta dimerisation and assembly with TCR []. The high affinity immunoglobulin epsilon receptor (IgE Fc receptor) subunit gamma associates with a variety of FcR alpha chains to form a functional signaling complex. The gamma subunit has a critical role in allowing the IgE Fc receptor to reach the cell surface and regulates several aspects of the immune response []. This family includes both CD3 zeta subunits and IgE Fc receptor gamma subunits. The gamma chain of the high affinity Fc receptor for IgE has significant structural homology to CD3 zeta and the related CD3 eta subunit and can facilitate T cell receptor expression and signaling in the absence of CD3 zeta and CD3 eta [].; PDB: 2HAC_B.
Probab=20.83 E-value=68 Score=22.59 Aligned_cols=12 Identities=17% Similarity=0.617 Sum_probs=10.2
Q ss_pred hHHHHHHHHHhc
Q 015398 95 AMLFLISALLSR 106 (407)
Q Consensus 95 vllFLySvILSR 106 (407)
.+||+|.+|+|-
T Consensus 10 giL~iYgiiiT~ 21 (33)
T PF11628_consen 10 GILFIYGIIITA 21 (33)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 479999999984
Done!