Query 015401
Match_columns 407
No_of_seqs 488 out of 2887
Neff 10.5
Searched_HMMs 46136
Date Fri Mar 29 05:58:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015401.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015401hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1838 Alpha/beta hydrolase [ 100.0 1.3E-56 2.8E-61 397.5 32.5 358 24-385 33-395 (409)
2 PLN02511 hydrolase 100.0 6.4E-54 1.4E-58 398.6 40.1 354 31-385 19-372 (388)
3 COG0429 Predicted hydrolase of 100.0 6.4E-53 1.4E-57 360.2 30.7 324 53-380 16-342 (345)
4 PRK10985 putative hydrolase; P 100.0 3.8E-45 8.2E-50 333.6 36.9 321 53-379 1-321 (324)
5 PRK00870 haloalkane dehalogena 100.0 3.6E-29 7.8E-34 227.1 14.2 271 76-377 11-300 (302)
6 PLN02824 hydrolase, alpha/beta 100.0 7.2E-29 1.6E-33 224.3 15.4 264 83-377 7-293 (294)
7 PRK03592 haloalkane dehalogena 100.0 2E-28 4.2E-33 221.6 16.2 267 84-379 7-290 (295)
8 PLN02385 hydrolase; alpha/beta 100.0 1.6E-27 3.5E-32 220.2 22.6 279 81-379 58-346 (349)
9 TIGR02240 PHA_depoly_arom poly 100.0 5.4E-28 1.2E-32 216.5 17.0 259 88-381 6-269 (276)
10 PLN02298 hydrolase, alpha/beta 100.0 8.2E-27 1.8E-31 214.3 21.9 279 82-379 30-318 (330)
11 PHA02857 monoglyceride lipase; 100.0 9E-27 1.9E-31 208.8 20.9 262 88-378 4-273 (276)
12 TIGR03343 biphenyl_bphD 2-hydr 99.9 5.2E-27 1.1E-31 211.1 17.7 251 96-376 19-281 (282)
13 PRK10749 lysophospholipase L2; 99.9 1.5E-26 3.3E-31 211.9 17.4 286 66-377 17-328 (330)
14 PLN02578 hydrolase 99.9 1.4E-26 3.1E-31 214.0 16.3 243 112-376 85-353 (354)
15 PLN03087 BODYGUARD 1 domain co 99.9 9.5E-27 2E-31 218.2 14.9 246 112-377 200-478 (481)
16 PLN02965 Probable pheophorbida 99.9 2.9E-27 6.4E-32 209.1 10.8 234 115-378 5-253 (255)
17 PLN02679 hydrolase, alpha/beta 99.9 3.5E-26 7.5E-31 211.6 17.3 242 112-378 87-357 (360)
18 KOG4178 Soluble epoxide hydrol 99.9 1.6E-26 3.5E-31 199.2 12.9 262 97-378 32-320 (322)
19 TIGR03056 bchO_mg_che_rel puta 99.9 2.6E-26 5.5E-31 206.1 13.4 240 112-376 27-278 (278)
20 PRK10349 carboxylesterase BioH 99.9 3.3E-26 7.2E-31 202.7 13.8 235 113-376 13-254 (256)
21 PRK10673 acyl-CoA esterase; Pr 99.9 7.1E-26 1.5E-30 200.6 15.4 237 110-377 13-254 (255)
22 TIGR01250 pro_imino_pep_2 prol 99.9 2.5E-25 5.5E-30 200.3 19.3 262 92-376 9-288 (288)
23 PRK06489 hypothetical protein; 99.9 6.2E-26 1.3E-30 210.4 14.9 244 113-379 69-358 (360)
24 COG2267 PldB Lysophospholipase 99.9 7.4E-26 1.6E-30 201.9 13.8 273 83-378 8-294 (298)
25 TIGR03611 RutD pyrimidine util 99.9 2.7E-26 6E-31 203.2 11.0 240 112-376 12-256 (257)
26 PRK03204 haloalkane dehalogena 99.9 2.3E-25 5E-30 200.0 16.9 257 83-375 13-285 (286)
27 TIGR02427 protocat_pcaD 3-oxoa 99.9 6.4E-26 1.4E-30 199.7 12.6 239 112-376 12-251 (251)
28 PRK11126 2-succinyl-6-hydroxy- 99.9 4.7E-26 1E-30 200.1 10.5 229 113-377 2-241 (242)
29 TIGR01738 bioH putative pimelo 99.9 9.9E-26 2.1E-30 197.9 12.2 235 112-375 3-245 (245)
30 PLN02652 hydrolase; alpha/beta 99.9 8.6E-25 1.9E-29 202.7 17.7 267 84-380 110-389 (395)
31 KOG1455 Lysophospholipase [Lip 99.9 1.3E-24 2.8E-29 184.3 15.7 281 79-377 22-311 (313)
32 PLN03084 alpha/beta hydrolase 99.9 1.6E-24 3.4E-29 199.6 17.1 239 112-376 126-382 (383)
33 PF12697 Abhydrolase_6: Alpha/ 99.9 1.5E-25 3.3E-30 194.1 9.2 220 116-360 1-224 (228)
34 KOG4409 Predicted hydrolase/ac 99.9 1.1E-23 2.4E-28 182.0 20.3 285 68-377 50-363 (365)
35 PRK07581 hypothetical protein; 99.9 3E-24 6.6E-29 197.9 17.9 250 112-380 40-338 (339)
36 COG1647 Esterase/lipase [Gener 99.9 1.8E-25 3.9E-30 180.1 8.0 227 112-376 14-242 (243)
37 PRK13604 luxD acyl transferase 99.9 3.2E-23 6.8E-28 181.3 22.8 252 84-381 9-262 (307)
38 PRK08775 homoserine O-acetyltr 99.9 2.6E-25 5.7E-30 204.9 10.3 251 115-379 59-340 (343)
39 KOG1454 Predicted hydrolase/ac 99.9 4.7E-25 1E-29 198.6 11.6 272 85-378 26-324 (326)
40 PRK00175 metX homoserine O-ace 99.9 1.4E-24 3E-29 202.2 12.2 256 112-380 47-376 (379)
41 TIGR03695 menH_SHCHC 2-succiny 99.9 2.5E-24 5.4E-29 189.4 12.5 243 113-376 1-251 (251)
42 PLN02894 hydrolase, alpha/beta 99.9 1.6E-22 3.6E-27 189.0 24.3 255 112-383 104-390 (402)
43 TIGR01607 PST-A Plasmodium sub 99.9 8.5E-24 1.8E-28 193.1 13.9 269 89-376 2-331 (332)
44 TIGR01392 homoserO_Ac_trn homo 99.9 1.7E-24 3.7E-29 200.2 9.4 252 112-376 30-351 (351)
45 TIGR01249 pro_imino_pep_1 prol 99.9 7.3E-23 1.6E-27 185.8 18.1 124 85-223 5-130 (306)
46 PRK05077 frsA fermentation/res 99.9 1.6E-22 3.5E-27 189.1 18.8 243 83-378 167-412 (414)
47 PLN02211 methyl indole-3-aceta 99.9 3.1E-23 6.7E-28 184.5 13.2 244 112-378 17-270 (273)
48 PRK14875 acetoin dehydrogenase 99.9 6.7E-23 1.4E-27 191.8 14.5 234 112-377 130-370 (371)
49 PLN02872 triacylglycerol lipas 99.9 2.5E-22 5.5E-27 185.3 15.3 304 66-380 27-391 (395)
50 PRK05855 short chain dehydroge 99.9 3.3E-22 7.2E-27 198.4 17.0 269 87-379 5-293 (582)
51 PLN02980 2-oxoglutarate decarb 99.9 1.9E-21 4E-26 208.5 15.8 245 112-381 1370-1642(1655)
52 KOG2984 Predicted hydrolase [G 99.9 4.6E-21 1E-25 151.8 13.0 228 112-377 41-275 (277)
53 TIGR03100 hydr1_PEP hydrolase, 99.9 2.2E-20 4.8E-25 166.4 18.4 250 92-376 9-273 (274)
54 PRK06765 homoserine O-acetyltr 99.8 1.6E-20 3.5E-25 173.5 13.5 276 88-377 29-387 (389)
55 PF00561 Abhydrolase_1: alpha/ 99.8 3E-21 6.6E-26 167.9 6.6 213 143-372 1-229 (230)
56 KOG4391 Predicted alpha/beta h 99.8 1.7E-19 3.6E-24 144.7 15.0 232 80-381 50-285 (300)
57 KOG2382 Predicted alpha/beta h 99.8 1.1E-20 2.4E-25 163.3 8.9 247 111-378 50-313 (315)
58 TIGR01836 PHA_synth_III_C poly 99.8 1.1E-19 2.4E-24 167.9 15.2 107 112-226 61-174 (350)
59 KOG1552 Predicted alpha/beta h 99.8 4E-19 8.6E-24 148.2 15.9 214 87-380 38-254 (258)
60 PRK10566 esterase; Provisional 99.8 8.3E-19 1.8E-23 154.7 18.4 207 112-378 26-248 (249)
61 TIGR01838 PHA_synth_I poly(R)- 99.8 4.9E-18 1.1E-22 161.2 16.1 235 112-360 187-463 (532)
62 PRK11071 esterase YqiA; Provis 99.8 4.7E-18 1E-22 142.2 13.0 185 114-376 2-189 (190)
63 COG1506 DAP2 Dipeptidyl aminop 99.8 4.3E-17 9.4E-22 160.6 21.5 248 79-379 360-617 (620)
64 PF12695 Abhydrolase_5: Alpha/ 99.8 4.9E-18 1.1E-22 136.6 11.3 144 115-352 1-145 (145)
65 TIGR03101 hydr2_PEP hydrolase, 99.8 2.3E-17 5E-22 144.0 16.2 130 88-224 4-135 (266)
66 KOG4667 Predicted esterase [Li 99.8 3.3E-17 7.2E-22 131.5 14.9 220 112-376 32-256 (269)
67 PRK07868 acyl-CoA synthetase; 99.7 2.7E-17 5.9E-22 171.0 16.1 256 111-382 65-365 (994)
68 COG2945 Predicted hydrolase of 99.7 1.4E-16 3.1E-21 126.1 15.3 187 96-376 15-205 (210)
69 KOG2564 Predicted acetyltransf 99.7 1.2E-16 2.6E-21 133.5 15.0 286 42-379 24-328 (343)
70 TIGR00976 /NonD putative hydro 99.7 2.1E-16 4.5E-21 154.4 15.9 133 89-227 1-136 (550)
71 COG0596 MhpC Predicted hydrola 99.7 2.4E-16 5.2E-21 139.4 11.5 244 113-375 21-279 (282)
72 PF06500 DUF1100: Alpha/beta h 99.7 2.1E-16 4.6E-21 142.8 10.1 240 82-378 163-409 (411)
73 PF00326 Peptidase_S9: Prolyl 99.7 5.8E-17 1.2E-21 139.2 5.7 195 133-379 5-210 (213)
74 PLN02442 S-formylglutathione h 99.7 1.6E-14 3.4E-19 129.1 20.0 206 94-352 29-262 (283)
75 PRK11460 putative hydrolase; P 99.6 5.7E-15 1.2E-19 127.9 13.2 177 111-379 14-209 (232)
76 TIGR01839 PHA_synth_II poly(R) 99.6 4.5E-15 9.6E-20 139.5 12.2 108 111-226 213-331 (560)
77 PRK10115 protease 2; Provision 99.6 4.8E-14 1.1E-18 140.0 20.1 226 83-352 415-653 (686)
78 TIGR02821 fghA_ester_D S-formy 99.6 4.1E-14 8.8E-19 126.2 17.7 110 112-224 41-174 (275)
79 PLN00021 chlorophyllase 99.6 3.6E-14 7.9E-19 127.4 17.1 103 111-222 50-165 (313)
80 COG2021 MET2 Homoserine acetyl 99.6 1.5E-14 3.2E-19 127.4 12.8 257 112-377 50-367 (368)
81 TIGR01840 esterase_phb esteras 99.6 6.3E-14 1.4E-18 120.0 15.2 110 111-223 11-130 (212)
82 COG4757 Predicted alpha/beta h 99.6 8.3E-15 1.8E-19 119.3 8.9 261 88-375 9-280 (281)
83 PF06342 DUF1057: Alpha/beta h 99.6 2.9E-13 6.2E-18 114.9 18.2 126 89-223 11-137 (297)
84 PF08538 DUF1749: Protein of u 99.6 2.3E-14 5.1E-19 124.3 11.4 254 95-376 19-303 (303)
85 TIGR03230 lipo_lipase lipoprot 99.5 5.8E-14 1.3E-18 129.8 12.7 112 109-222 37-153 (442)
86 TIGR01849 PHB_depoly_PhaZ poly 99.5 9.1E-14 2E-18 127.1 13.6 251 113-377 102-405 (406)
87 PF01738 DLH: Dienelactone hyd 99.5 7.4E-14 1.6E-18 120.3 12.0 168 111-358 12-195 (218)
88 PF05448 AXE1: Acetyl xylan es 99.5 2.2E-13 4.8E-18 122.5 15.3 239 85-377 57-319 (320)
89 COG0412 Dienelactone hydrolase 99.5 5.5E-13 1.2E-17 115.0 15.9 185 87-356 5-206 (236)
90 cd00707 Pancreat_lipase_like P 99.5 4.8E-14 1E-18 124.9 9.5 111 111-223 34-147 (275)
91 COG3208 GrsT Predicted thioest 99.5 1.9E-14 4.1E-19 119.7 3.7 229 111-376 5-234 (244)
92 PF02129 Peptidase_S15: X-Pro 99.5 5.9E-14 1.3E-18 125.0 7.2 129 93-226 1-139 (272)
93 PF02230 Abhydrolase_2: Phosph 99.5 8.3E-13 1.8E-17 113.5 13.3 181 111-378 12-215 (216)
94 PRK10162 acetyl esterase; Prov 99.5 4.5E-12 9.8E-17 115.3 18.8 128 85-225 58-197 (318)
95 COG3458 Acetyl esterase (deace 99.4 1E-12 2.2E-17 109.9 11.6 237 85-378 57-317 (321)
96 KOG2624 Triglyceride lipase-ch 99.4 3.9E-12 8.5E-17 116.2 16.2 291 80-379 44-399 (403)
97 PF06821 Ser_hydrolase: Serine 99.4 7.3E-14 1.6E-18 113.9 4.3 158 116-358 1-159 (171)
98 COG3571 Predicted hydrolase of 99.4 1.1E-11 2.4E-16 95.1 12.9 168 112-353 13-182 (213)
99 PF02273 Acyl_transf_2: Acyl t 99.4 2.2E-11 4.8E-16 100.5 14.3 248 86-380 4-254 (294)
100 PRK05371 x-prolyl-dipeptidyl a 99.3 2.7E-11 5.9E-16 121.3 15.8 232 133-383 270-524 (767)
101 PF05728 UPF0227: Uncharacteri 99.3 1.2E-10 2.7E-15 96.0 14.8 89 116-224 2-92 (187)
102 KOG3043 Predicted hydrolase re 99.3 4.4E-11 9.6E-16 97.6 11.6 161 112-354 38-211 (242)
103 TIGR03502 lipase_Pla1_cef extr 99.3 1.7E-11 3.7E-16 120.5 10.9 94 112-207 448-576 (792)
104 PF09752 DUF2048: Uncharacteri 99.3 2.4E-10 5.1E-15 101.1 16.6 237 111-376 90-347 (348)
105 COG3243 PhaC Poly(3-hydroxyalk 99.3 1.5E-11 3.2E-16 109.9 8.4 252 112-379 106-400 (445)
106 KOG2281 Dipeptidyl aminopeptid 99.3 1.8E-10 4E-15 107.1 15.4 294 23-377 540-866 (867)
107 COG0400 Predicted esterase [Ge 99.3 1.3E-10 2.7E-15 97.1 13.0 173 111-377 16-204 (207)
108 KOG2931 Differentiation-relate 99.3 1.3E-09 2.8E-14 92.7 19.0 256 84-378 22-306 (326)
109 COG2936 Predicted acyl esteras 99.2 8.3E-11 1.8E-15 110.5 12.8 138 82-227 17-163 (563)
110 PF03096 Ndr: Ndr family; Int 99.2 1.5E-11 3.1E-16 106.0 6.8 257 87-377 2-278 (283)
111 KOG2565 Predicted hydrolases o 99.2 1.6E-10 3.6E-15 100.9 12.5 99 112-217 151-258 (469)
112 PF07859 Abhydrolase_3: alpha/ 99.2 2.8E-11 6.2E-16 103.7 7.3 102 116-225 1-112 (211)
113 PF12146 Hydrolase_4: Putative 99.2 5.9E-11 1.3E-15 83.2 6.4 76 94-176 1-78 (79)
114 PF12740 Chlorophyllase2: Chlo 99.2 1.1E-09 2.3E-14 93.8 14.9 101 111-222 15-130 (259)
115 PF00975 Thioesterase: Thioest 99.2 5.3E-10 1.1E-14 97.2 12.7 103 114-223 1-104 (229)
116 COG0657 Aes Esterase/lipase [L 99.1 1.6E-09 3.5E-14 98.7 16.0 129 90-226 57-194 (312)
117 PF10230 DUF2305: Uncharacteri 99.1 6E-10 1.3E-14 98.2 12.5 109 113-223 2-122 (266)
118 KOG2100 Dipeptidyl aminopeptid 99.1 2.4E-09 5.2E-14 107.2 16.8 233 86-378 500-747 (755)
119 KOG1515 Arylacetamide deacetyl 99.1 8E-09 1.7E-13 92.8 17.3 251 88-377 65-334 (336)
120 PF12715 Abhydrolase_7: Abhydr 99.1 2.4E-10 5.2E-15 102.1 7.2 127 89-221 93-258 (390)
121 PF07819 PGAP1: PGAP1-like pro 99.1 1.2E-09 2.6E-14 93.6 11.0 108 112-224 3-124 (225)
122 KOG1553 Predicted alpha/beta h 99.1 8.9E-10 1.9E-14 95.4 9.6 130 81-220 211-342 (517)
123 PF03583 LIP: Secretory lipase 99.1 4.3E-09 9.3E-14 94.0 14.3 236 130-383 14-286 (290)
124 KOG4627 Kynurenine formamidase 99.1 1.1E-09 2.4E-14 87.9 9.2 218 87-378 46-267 (270)
125 PF10503 Esterase_phd: Esteras 99.0 7.7E-09 1.7E-13 87.5 14.1 108 112-222 15-131 (220)
126 PF06057 VirJ: Bacterial virul 99.0 3.7E-09 8E-14 85.5 10.4 102 114-222 3-106 (192)
127 COG4099 Predicted peptidase [G 99.0 4.3E-08 9.2E-13 83.6 17.0 125 92-224 169-305 (387)
128 PF11339 DUF3141: Protein of u 99.0 4.5E-08 9.7E-13 90.1 17.4 113 102-225 57-177 (581)
129 COG3545 Predicted esterase of 99.0 6.1E-09 1.3E-13 82.2 9.9 92 114-223 3-94 (181)
130 PF07224 Chlorophyllase: Chlor 99.0 1.2E-08 2.5E-13 85.7 11.9 103 111-222 44-156 (307)
131 COG4188 Predicted dienelactone 98.9 1.8E-09 3.9E-14 95.9 7.1 204 112-360 70-302 (365)
132 PF06028 DUF915: Alpha/beta hy 98.9 2.9E-09 6.4E-14 92.1 8.0 111 112-224 10-144 (255)
133 PTZ00472 serine carboxypeptida 98.9 1.3E-07 2.7E-12 90.1 19.3 137 84-224 47-217 (462)
134 PF05677 DUF818: Chlamydia CHL 98.9 3.6E-07 7.8E-12 80.2 19.3 136 66-209 90-238 (365)
135 PF00151 Lipase: Lipase; Inte 98.8 2.7E-09 5.9E-14 96.5 4.5 115 109-223 67-187 (331)
136 PRK10252 entF enterobactin syn 98.8 1.4E-07 3E-12 102.7 18.2 100 112-221 1067-1169(1296)
137 PF01674 Lipase_2: Lipase (cla 98.8 2E-09 4.4E-14 90.8 3.0 90 114-205 2-94 (219)
138 PF03403 PAF-AH_p_II: Platelet 98.8 4.5E-09 9.8E-14 97.1 5.1 106 111-221 98-260 (379)
139 KOG2551 Phospholipase/carboxyh 98.8 3.5E-07 7.6E-12 75.2 15.0 66 307-382 159-224 (230)
140 PLN02733 phosphatidylcholine-s 98.8 1.6E-08 3.4E-13 94.7 8.1 95 129-226 108-204 (440)
141 PRK04940 hypothetical protein; 98.7 4.7E-07 1E-11 73.2 13.7 34 186-224 60-93 (180)
142 COG3509 LpqC Poly(3-hydroxybut 98.6 3.9E-07 8.5E-12 78.3 11.5 124 94-223 44-179 (312)
143 COG4814 Uncharacterized protei 98.6 6.7E-07 1.4E-11 74.8 12.2 110 113-224 45-177 (288)
144 KOG4840 Predicted hydrolases o 98.6 1.3E-06 2.9E-11 71.4 13.2 109 112-225 35-146 (299)
145 KOG3975 Uncharacterized conser 98.6 1.5E-06 3.4E-11 72.4 13.4 111 111-223 27-147 (301)
146 PF03959 FSH1: Serine hydrolas 98.6 8.3E-08 1.8E-12 81.9 6.2 166 112-355 3-204 (212)
147 PF08840 BAAT_C: BAAT / Acyl-C 98.6 1.4E-08 3.1E-13 86.5 1.2 51 170-223 4-56 (213)
148 PF05990 DUF900: Alpha/beta hy 98.6 6.4E-07 1.4E-11 77.3 10.7 112 112-224 17-138 (233)
149 COG1770 PtrB Protease II [Amin 98.5 1.7E-06 3.8E-11 82.1 13.8 138 85-224 420-563 (682)
150 KOG3847 Phospholipase A2 (plat 98.5 1.8E-06 3.9E-11 74.4 12.3 106 111-221 116-273 (399)
151 KOG2237 Predicted serine prote 98.5 1.5E-06 3.3E-11 81.9 11.4 139 84-224 441-585 (712)
152 KOG3253 Predicted alpha/beta h 98.5 5.1E-07 1.1E-11 84.2 7.7 191 112-380 175-376 (784)
153 COG3319 Thioesterase domains o 98.4 1.4E-06 3E-11 75.4 9.1 103 114-224 1-104 (257)
154 PF05705 DUF829: Eukaryotic pr 98.3 2.7E-05 5.9E-10 68.0 15.3 222 115-375 1-240 (240)
155 KOG1551 Uncharacterized conser 98.3 3.6E-06 7.8E-11 70.7 9.0 242 96-379 101-367 (371)
156 PF00756 Esterase: Putative es 98.3 2.1E-06 4.5E-11 75.7 7.9 112 111-224 22-151 (251)
157 PF12048 DUF3530: Protein of u 98.3 7.5E-05 1.6E-09 67.3 16.7 111 111-223 85-229 (310)
158 KOG2112 Lysophospholipase [Lip 98.2 1E-05 2.2E-10 66.2 9.1 179 113-377 3-203 (206)
159 smart00824 PKS_TE Thioesterase 98.2 5E-05 1.1E-09 64.6 14.1 82 132-221 16-100 (212)
160 PF05577 Peptidase_S28: Serine 98.2 9.9E-06 2.1E-10 77.4 9.9 126 94-224 11-149 (434)
161 PRK10439 enterobactin/ferric e 98.1 3E-05 6.6E-10 72.7 12.2 108 110-223 206-323 (411)
162 PLN02606 palmitoyl-protein thi 98.1 7.9E-05 1.7E-09 65.3 13.7 104 113-223 26-132 (306)
163 PF05057 DUF676: Putative seri 98.1 9.1E-06 2E-10 69.5 7.2 91 112-205 3-97 (217)
164 COG1075 LipA Predicted acetylt 98.0 2.2E-05 4.8E-10 71.8 7.9 105 113-225 59-166 (336)
165 COG4782 Uncharacterized protei 98.0 5.3E-05 1.1E-09 67.3 9.4 113 111-224 114-235 (377)
166 COG1505 Serine proteases of th 98.0 7E-05 1.5E-09 70.6 10.5 156 65-224 374-536 (648)
167 KOG3101 Esterase D [General fu 97.9 6.9E-05 1.5E-09 61.1 8.5 111 112-223 43-179 (283)
168 KOG3967 Uncharacterized conser 97.9 0.00019 4.2E-09 58.6 10.9 114 110-223 98-227 (297)
169 cd00312 Esterase_lipase Estera 97.9 4.6E-05 1E-09 74.2 9.0 124 96-223 78-213 (493)
170 COG1073 Hydrolases of the alph 97.8 0.00033 7.2E-09 63.0 12.3 75 301-378 221-297 (299)
171 PF02450 LCAT: Lecithin:choles 97.8 6.5E-05 1.4E-09 70.3 7.5 86 130-224 66-161 (389)
172 KOG3724 Negative regulator of 97.7 0.00015 3.2E-09 70.4 9.2 110 108-223 84-220 (973)
173 PF04301 DUF452: Protein of un 97.7 0.00025 5.5E-09 59.4 8.3 78 112-221 10-88 (213)
174 COG3150 Predicted esterase [Ge 97.6 0.00016 3.5E-09 56.8 5.6 88 116-221 2-89 (191)
175 PF11144 DUF2920: Protein of u 97.5 0.0012 2.7E-08 60.3 11.6 50 169-220 163-216 (403)
176 PLN02633 palmitoyl protein thi 97.5 0.0012 2.6E-08 58.1 11.1 105 112-223 24-131 (314)
177 PF00135 COesterase: Carboxyle 97.5 0.00029 6.2E-09 69.5 8.0 124 96-222 108-244 (535)
178 KOG2183 Prolylcarboxypeptidase 97.5 0.00056 1.2E-08 61.8 8.7 105 114-223 81-202 (492)
179 COG2272 PnbA Carboxylesterase 97.5 0.00053 1.1E-08 63.8 8.6 110 112-224 93-218 (491)
180 PF10340 DUF2424: Protein of u 97.4 0.0025 5.5E-08 58.1 12.3 111 110-225 119-237 (374)
181 cd00741 Lipase Lipase. Lipase 97.4 0.00039 8.4E-09 56.1 6.4 55 169-223 11-67 (153)
182 PF08386 Abhydrolase_4: TAP-li 97.4 0.00018 3.9E-09 53.4 3.8 60 311-377 34-93 (103)
183 PF10142 PhoPQ_related: PhoPQ- 97.4 0.0027 5.9E-08 58.1 11.6 75 299-382 250-324 (367)
184 KOG2541 Palmitoyl protein thio 97.3 0.0032 7E-08 53.7 10.5 103 114-223 24-128 (296)
185 PF06259 Abhydrolase_8: Alpha/ 97.3 0.0086 1.9E-07 48.9 12.8 110 112-223 18-144 (177)
186 PF07082 DUF1350: Protein of u 97.2 0.0028 6.1E-08 53.9 8.9 98 112-220 16-122 (250)
187 PF02089 Palm_thioest: Palmito 97.1 0.00072 1.6E-08 58.9 4.7 107 112-223 4-116 (279)
188 COG4553 DepA Poly-beta-hydroxy 97.1 0.04 8.6E-07 47.8 14.8 255 112-382 102-411 (415)
189 PF01764 Lipase_3: Lipase (cla 97.0 0.0017 3.8E-08 51.3 5.9 55 168-222 46-104 (140)
190 PLN02517 phosphatidylcholine-s 97.0 0.00087 1.9E-08 64.0 4.6 91 132-224 159-264 (642)
191 KOG2369 Lecithin:cholesterol a 97.0 0.00067 1.5E-08 62.6 3.6 91 129-224 124-226 (473)
192 KOG2182 Hydrolytic enzymes of 97.0 0.013 2.9E-07 54.6 11.8 109 112-223 85-207 (514)
193 PF00450 Peptidase_S10: Serine 96.9 0.0073 1.6E-07 57.4 10.1 139 83-226 10-184 (415)
194 PF01083 Cutinase: Cutinase; 96.9 0.0019 4.1E-08 53.3 5.1 53 169-223 64-122 (179)
195 cd00519 Lipase_3 Lipase (class 96.8 0.0029 6.3E-08 54.7 6.0 54 169-222 111-166 (229)
196 COG0627 Predicted esterase [Ge 96.7 0.0038 8.2E-08 56.2 6.4 109 111-224 52-188 (316)
197 COG2819 Predicted hydrolase of 96.7 0.099 2.2E-06 45.2 14.1 35 186-222 137-171 (264)
198 PF04083 Abhydro_lipase: Parti 96.7 0.0043 9.3E-08 41.0 4.6 46 82-127 10-57 (63)
199 PF11187 DUF2974: Protein of u 96.6 0.0047 1E-07 52.8 6.1 53 170-223 69-123 (224)
200 COG3946 VirJ Type IV secretory 96.4 0.012 2.5E-07 53.5 7.1 91 112-209 259-349 (456)
201 PLN02162 triacylglycerol lipas 96.2 0.014 2.9E-07 54.6 6.7 53 171-223 263-321 (475)
202 PLN02454 triacylglycerol lipas 96.2 0.0076 1.6E-07 55.7 4.9 40 167-206 207-248 (414)
203 KOG1282 Serine carboxypeptidas 96.2 0.062 1.4E-06 50.8 11.0 137 82-223 42-213 (454)
204 PF05576 Peptidase_S37: PS-10 96.1 0.041 9E-07 50.3 9.2 107 112-225 62-171 (448)
205 PLN00413 triacylglycerol lipas 96.1 0.014 3.1E-07 54.6 6.5 53 171-223 269-327 (479)
206 PLN02209 serine carboxypeptida 96.1 0.086 1.9E-06 50.1 11.7 136 85-224 40-213 (437)
207 COG2382 Fes Enterochelin ester 95.9 0.016 3.5E-07 50.7 5.6 108 110-223 95-212 (299)
208 PLN03016 sinapoylglucose-malat 95.8 0.073 1.6E-06 50.5 9.9 137 85-223 38-210 (433)
209 PLN02934 triacylglycerol lipas 95.5 0.036 7.9E-07 52.4 6.6 35 171-205 306-340 (515)
210 KOG4540 Putative lipase essent 95.4 0.043 9.3E-07 47.4 5.9 54 166-224 256-309 (425)
211 COG5153 CVT17 Putative lipase 95.4 0.043 9.3E-07 47.4 5.9 54 166-224 256-309 (425)
212 PLN02571 triacylglycerol lipas 95.2 0.03 6.5E-07 51.9 5.0 38 169-206 207-246 (413)
213 COG2939 Carboxypeptidase C (ca 95.0 0.11 2.3E-06 49.0 7.8 96 110-208 98-220 (498)
214 KOG1202 Animal-type fatty acid 95.0 0.41 8.8E-06 49.8 12.1 97 111-222 2121-2218(2376)
215 PF11288 DUF3089: Protein of u 95.0 0.05 1.1E-06 45.5 5.1 68 140-207 43-116 (207)
216 PLN02310 triacylglycerol lipas 94.8 0.069 1.5E-06 49.4 5.9 52 170-223 189-248 (405)
217 KOG4372 Predicted alpha/beta h 94.6 0.071 1.5E-06 48.7 5.6 88 112-205 79-169 (405)
218 PLN02324 triacylglycerol lipas 94.6 0.056 1.2E-06 50.1 5.0 39 168-206 195-235 (415)
219 PLN02408 phospholipase A1 94.6 0.056 1.2E-06 49.4 4.9 55 168-222 180-239 (365)
220 PLN02719 triacylglycerol lipas 94.1 0.083 1.8E-06 50.1 4.9 39 168-206 275-318 (518)
221 PLN02847 triacylglycerol lipas 94.1 0.1 2.2E-06 50.3 5.6 36 171-206 236-271 (633)
222 COG4947 Uncharacterized protei 93.9 0.29 6.3E-06 39.1 6.8 36 187-224 102-137 (227)
223 PLN02761 lipase class 3 family 93.7 0.12 2.5E-06 49.3 5.2 38 168-205 270-313 (527)
224 PLN02753 triacylglycerol lipas 93.5 0.11 2.5E-06 49.3 4.8 38 168-205 289-331 (531)
225 PLN02802 triacylglycerol lipas 93.3 0.12 2.7E-06 48.9 4.7 39 169-207 311-351 (509)
226 KOG1516 Carboxylesterase and r 93.1 0.19 4.1E-06 49.7 6.1 108 113-222 112-231 (545)
227 KOG4569 Predicted lipase [Lipi 93.1 0.16 3.4E-06 46.7 5.0 57 166-222 151-211 (336)
228 PLN03037 lipase class 3 family 93.0 0.11 2.4E-06 49.4 3.9 36 171-206 299-338 (525)
229 KOG4388 Hormone-sensitive lipa 92.6 0.39 8.5E-06 45.9 6.8 103 110-223 393-508 (880)
230 PLN02213 sinapoylglucose-malat 92.1 0.44 9.6E-06 43.5 6.5 78 144-221 3-94 (319)
231 PF05277 DUF726: Protein of un 92.1 0.35 7.5E-06 44.1 5.7 41 184-224 218-261 (345)
232 COG0529 CysC Adenylylsulfate k 90.7 1.7 3.7E-05 35.3 7.6 39 112-150 21-59 (197)
233 KOG2521 Uncharacterized conser 90.7 1.3 2.9E-05 40.4 8.0 242 112-380 37-292 (350)
234 COG2830 Uncharacterized protei 90.6 2.8 6.1E-05 33.2 8.5 76 114-221 12-88 (214)
235 PF08237 PE-PPE: PE-PPE domain 90.2 1.8 3.9E-05 37.1 8.0 81 142-223 2-89 (225)
236 PF06850 PHB_depo_C: PHB de-po 89.8 0.27 5.9E-06 40.3 2.6 64 311-377 134-201 (202)
237 PF06441 EHN: Epoxide hydrolas 88.2 0.72 1.6E-05 34.6 3.7 35 90-128 73-107 (112)
238 TIGR03712 acc_sec_asp2 accesso 87.1 2.7 5.8E-05 39.8 7.4 116 92-223 273-389 (511)
239 PF06309 Torsin: Torsin; Inte 85.3 1.7 3.6E-05 33.3 4.3 32 111-143 50-82 (127)
240 COG4287 PqaA PhoPQ-activated p 85.1 3 6.5E-05 37.9 6.4 63 308-380 326-389 (507)
241 PF09994 DUF2235: Uncharacteri 84.6 7.5 0.00016 34.6 8.9 94 114-207 2-113 (277)
242 COG3673 Uncharacterized conser 84.3 9.2 0.0002 34.2 8.8 96 111-207 29-143 (423)
243 PF03283 PAE: Pectinacetyleste 82.9 3.7 8E-05 38.1 6.4 36 169-204 137-174 (361)
244 KOG2385 Uncharacterized conser 79.5 3.7 8.1E-05 39.0 5.1 43 183-225 444-489 (633)
245 KOG2029 Uncharacterized conser 78.8 2.2 4.8E-05 41.3 3.5 54 170-223 508-572 (697)
246 PF01583 APS_kinase: Adenylyls 77.5 5.1 0.00011 32.1 4.7 39 113-151 1-39 (156)
247 PF09949 DUF2183: Uncharacteri 76.9 26 0.00056 25.7 7.9 82 132-218 14-97 (100)
248 PF07519 Tannase: Tannase and 75.8 4.1 8.8E-05 39.4 4.5 88 136-226 53-153 (474)
249 COG4822 CbiK Cobalamin biosynt 71.6 27 0.00058 29.4 7.5 56 110-182 135-191 (265)
250 PLN02213 sinapoylglucose-malat 71.2 4.1 9E-05 37.1 3.2 59 311-376 233-315 (319)
251 PF00450 Peptidase_S10: Serine 67.1 2.1 4.5E-05 40.6 0.4 60 311-376 330-414 (415)
252 PF03205 MobB: Molybdopterin g 65.8 15 0.00032 28.9 4.9 44 115-158 1-44 (140)
253 TIGR03709 PPK2_rel_1 polyphosp 65.7 8.9 0.00019 33.7 3.9 40 112-151 54-93 (264)
254 TIGR03707 PPK2_P_aer polyphosp 65.2 9 0.0002 32.9 3.9 40 112-151 29-68 (230)
255 PF07519 Tannase: Tannase and 59.7 16 0.00035 35.3 5.0 63 311-377 353-426 (474)
256 PF10081 Abhydrolase_9: Alpha/ 59.4 67 0.0015 28.5 8.1 88 132-224 51-148 (289)
257 PF01580 FtsK_SpoIIIE: FtsK/Sp 59.2 44 0.00096 28.0 7.1 64 117-180 41-112 (205)
258 PRK05282 (alpha)-aspartyl dipe 58.9 25 0.00055 30.3 5.5 39 113-151 31-70 (233)
259 KOG1282 Serine carboxypeptidas 58.8 12 0.00026 35.7 3.8 61 311-377 363-447 (454)
260 PLN03016 sinapoylglucose-malat 57.1 12 0.00026 35.7 3.6 59 311-376 347-429 (433)
261 PRK03846 adenylylsulfate kinas 56.7 62 0.0013 27.0 7.5 39 112-150 22-60 (198)
262 PF03976 PPK2: Polyphosphate k 56.2 5.5 0.00012 34.2 1.0 40 112-151 29-68 (228)
263 KOG2170 ATPase of the AAA+ sup 56.0 20 0.00043 32.0 4.4 31 111-142 107-138 (344)
264 PLN02209 serine carboxypeptida 55.3 13 0.00029 35.5 3.5 59 311-376 351-433 (437)
265 cd01841 NnaC_like NnaC (CMP-Ne 54.1 66 0.0014 25.9 7.2 75 114-192 23-97 (174)
266 PF14606 Lipase_GDSL_3: GDSL-l 54.0 32 0.00069 28.3 5.0 32 163-194 71-102 (178)
267 COG4088 Predicted nucleotide k 51.5 19 0.00042 30.3 3.4 36 115-150 2-37 (261)
268 PRK00889 adenylylsulfate kinas 51.2 36 0.00078 27.7 5.1 38 113-150 3-40 (175)
269 KOG1283 Serine carboxypeptidas 51.1 20 0.00044 32.2 3.6 96 111-207 29-143 (414)
270 TIGR00455 apsK adenylylsulfate 50.8 63 0.0014 26.5 6.6 39 112-150 16-54 (184)
271 KOG1532 GTPase XAB1, interacts 50.8 27 0.00058 30.8 4.2 39 112-150 17-55 (366)
272 PF09419 PGP_phosphatase: Mito 50.5 59 0.0013 26.4 6.0 53 138-196 36-88 (168)
273 cd03146 GAT1_Peptidase_E Type 47.6 92 0.002 26.4 7.2 40 112-152 30-70 (212)
274 COG1087 GalE UDP-glucose 4-epi 47.0 45 0.00098 29.9 5.1 25 133-157 15-39 (329)
275 PRK07933 thymidylate kinase; V 46.9 50 0.0011 28.1 5.4 41 116-156 2-42 (213)
276 PF08484 Methyltransf_14: C-me 46.6 54 0.0012 26.4 5.3 46 169-218 54-99 (160)
277 COG1073 Hydrolases of the alph 44.2 1.6 3.5E-05 38.8 -4.4 95 111-208 47-154 (299)
278 cd04502 SGNH_hydrolase_like_7 43.9 79 0.0017 25.4 6.1 75 115-193 23-97 (171)
279 cd05312 NAD_bind_1_malic_enz N 43.7 25 0.00054 31.2 3.1 102 116-224 27-144 (279)
280 PF02606 LpxK: Tetraacyldisacc 43.6 1.1E+02 0.0025 27.9 7.5 43 115-158 36-80 (326)
281 cd01983 Fer4_NifH The Fer4_Nif 40.9 50 0.0011 23.1 4.0 33 117-149 2-34 (99)
282 PLN02924 thymidylate kinase 40.3 73 0.0016 27.2 5.4 43 110-152 12-54 (220)
283 PF00698 Acyl_transf_1: Acyl t 40.1 23 0.00049 32.3 2.5 24 184-207 82-105 (318)
284 PF01656 CbiA: CobQ/CobB/MinD/ 39.9 45 0.00098 27.4 4.2 35 117-151 2-36 (195)
285 cd07225 Pat_PNPLA6_PNPLA7 Pata 39.3 32 0.0007 31.1 3.3 22 187-208 44-65 (306)
286 PRK05368 homoserine O-succinyl 39.1 62 0.0014 29.2 5.0 58 140-206 97-154 (302)
287 PF04084 ORC2: Origin recognit 39.1 1.9E+02 0.0041 26.5 8.2 49 169-220 120-176 (326)
288 PF06792 UPF0261: Uncharacteri 38.8 1.7E+02 0.0037 27.6 7.8 100 114-218 2-125 (403)
289 cd07212 Pat_PNPLA9 Patatin-lik 38.0 51 0.0011 30.0 4.4 19 189-207 35-53 (312)
290 cd07198 Patatin Patatin-like p 38.0 40 0.00087 27.4 3.4 23 187-209 27-49 (172)
291 TIGR00176 mobB molybdopterin-g 37.9 64 0.0014 25.8 4.5 39 116-154 1-39 (155)
292 PRK12467 peptide synthase; Pro 37.8 1.3E+02 0.0028 38.2 8.7 97 113-219 3692-3791(3956)
293 PF05576 Peptidase_S37: PS-10 37.7 28 0.00061 32.6 2.6 49 307-358 347-395 (448)
294 TIGR03708 poly_P_AMP_trns poly 37.5 53 0.0011 31.9 4.5 42 112-153 38-79 (493)
295 PRK10279 hypothetical protein; 37.3 34 0.00073 30.9 3.1 21 187-207 34-54 (300)
296 cd03131 GATase1_HTS Type 1 glu 37.1 33 0.00071 28.1 2.7 60 140-208 60-119 (175)
297 PRK06696 uridine kinase; Valid 37.0 82 0.0018 26.9 5.3 38 112-149 20-57 (223)
298 smart00827 PKS_AT Acyl transfe 36.3 33 0.0007 30.8 2.9 23 184-206 80-102 (298)
299 cd02027 APSK Adenosine 5'-phos 36.1 90 0.0019 24.6 5.1 34 116-149 1-34 (149)
300 PF10412 TrwB_AAD_bind: Type I 36.1 43 0.00094 31.5 3.7 36 117-152 18-53 (386)
301 PRK02399 hypothetical protein; 36.1 2.5E+02 0.0053 26.6 8.3 101 114-218 4-127 (406)
302 cd07207 Pat_ExoU_VipD_like Exo 35.8 41 0.0009 27.8 3.2 34 174-208 16-49 (194)
303 PF02492 cobW: CobW/HypB/UreG, 35.6 50 0.0011 27.0 3.6 33 115-148 1-33 (178)
304 PRK10751 molybdopterin-guanine 35.5 99 0.0021 25.3 5.2 44 112-155 4-47 (173)
305 PF01935 DUF87: Domain of unkn 35.5 60 0.0013 27.7 4.3 36 117-152 26-62 (229)
306 PRK13230 nitrogenase reductase 35.4 70 0.0015 28.4 4.8 41 115-156 3-43 (279)
307 COG0331 FabD (acyl-carrier-pro 35.3 48 0.001 30.1 3.7 30 176-205 74-104 (310)
308 PRK00652 lpxK tetraacyldisacch 35.2 1.6E+02 0.0036 26.9 7.1 41 116-157 51-93 (325)
309 PRK14974 cell division protein 34.8 1.7E+02 0.0036 27.0 7.1 71 136-218 216-286 (336)
310 TIGR03131 malonate_mdcH malona 34.4 36 0.00077 30.6 2.8 24 184-207 74-97 (295)
311 TIGR02069 cyanophycinase cyano 34.3 1.4E+02 0.0029 26.2 6.3 39 112-151 27-66 (250)
312 COG1763 MobB Molybdopterin-gua 34.2 91 0.002 25.2 4.7 41 114-154 2-42 (161)
313 CHL00175 minD septum-site dete 33.9 1E+02 0.0022 27.4 5.6 40 112-151 14-53 (281)
314 PF12242 Eno-Rase_NADH_b: NAD( 33.9 90 0.0019 21.5 3.9 43 167-209 18-63 (78)
315 PRK13700 conjugal transfer pro 33.6 67 0.0015 32.8 4.7 37 116-152 187-223 (732)
316 cd07227 Pat_Fungal_NTE1 Fungal 33.4 47 0.001 29.5 3.3 21 187-207 39-59 (269)
317 COG0482 TrmU Predicted tRNA(5- 33.2 73 0.0016 29.4 4.4 62 112-181 3-64 (356)
318 PRK11613 folP dihydropteroate 33.1 3E+02 0.0065 24.6 8.2 60 130-200 164-225 (282)
319 COG1089 Gmd GDP-D-mannose dehy 33.1 2E+02 0.0043 25.8 6.8 35 116-154 4-38 (345)
320 PF13207 AAA_17: AAA domain; P 33.1 59 0.0013 24.2 3.5 32 116-150 1-32 (121)
321 cd01828 sialate_O-acetylestera 32.9 1.9E+02 0.004 23.1 6.6 73 116-193 23-95 (169)
322 PF05724 TPMT: Thiopurine S-me 32.8 62 0.0013 27.6 3.8 30 114-150 38-67 (218)
323 TIGR02884 spore_pdaA delta-lac 32.4 65 0.0014 27.6 3.9 36 113-149 186-221 (224)
324 TIGR00128 fabD malonyl CoA-acy 32.3 57 0.0012 29.0 3.8 23 185-207 82-104 (290)
325 TIGR01425 SRP54_euk signal rec 32.3 89 0.0019 29.8 5.0 39 112-150 98-136 (429)
326 PRK13768 GTPase; Provisional 31.7 82 0.0018 27.6 4.5 36 115-150 3-38 (253)
327 cd02036 MinD Bacterial cell di 31.4 91 0.002 25.1 4.6 36 116-151 2-37 (179)
328 PRK09739 hypothetical protein; 31.3 3.1E+02 0.0067 22.8 8.1 40 115-154 7-46 (199)
329 cd07210 Pat_hypo_W_succinogene 31.3 60 0.0013 27.8 3.5 22 187-208 29-50 (221)
330 PF10605 3HBOH: 3HB-oligomer h 31.2 52 0.0011 32.5 3.3 48 308-355 551-606 (690)
331 COG1576 Uncharacterized conser 30.9 1.6E+02 0.0035 23.5 5.5 52 139-203 64-115 (155)
332 cd02028 UMPK_like Uridine mono 30.9 2E+02 0.0043 23.6 6.4 38 116-153 1-38 (179)
333 COG3727 Vsr DNA G:T-mismatch r 30.6 92 0.002 24.0 3.8 14 135-148 101-114 (150)
334 cd01838 Isoamyl_acetate_hydrol 30.6 1.6E+02 0.0034 24.1 6.0 30 164-193 86-115 (199)
335 PRK05541 adenylylsulfate kinas 30.6 93 0.002 25.2 4.5 38 112-149 5-42 (176)
336 COG1752 RssA Predicted esteras 30.2 52 0.0011 29.8 3.1 23 187-209 40-62 (306)
337 TIGR02759 TraD_Ftype type IV c 30.1 84 0.0018 31.3 4.7 38 116-153 178-215 (566)
338 PRK06731 flhF flagellar biosyn 30.0 4E+02 0.0086 23.7 9.2 66 141-218 153-218 (270)
339 KOG0635 Adenosine 5'-phosphosu 29.7 1.4E+02 0.0031 23.8 4.9 39 112-150 29-67 (207)
340 cd04951 GT1_WbdM_like This fam 29.3 4.3E+02 0.0092 23.8 9.9 38 115-152 2-39 (360)
341 cd01833 XynB_like SGNH_hydrola 29.1 1.6E+02 0.0034 23.1 5.6 69 120-192 18-86 (157)
342 COG1341 Predicted GTPase or GT 29.0 1.2E+02 0.0025 28.5 5.1 49 112-161 71-119 (398)
343 cd01832 SGNH_hydrolase_like_1 28.9 1.6E+02 0.0035 23.8 5.7 49 139-192 64-112 (185)
344 TIGR00682 lpxK tetraacyldisacc 28.7 1.5E+02 0.0033 26.9 5.8 41 116-157 30-72 (311)
345 PRK13973 thymidylate kinase; P 28.6 1.4E+02 0.0031 25.2 5.4 39 114-152 3-41 (213)
346 TIGR03371 cellulose_yhjQ cellu 28.6 1.1E+02 0.0024 26.4 4.8 40 115-154 3-42 (246)
347 cd07228 Pat_NTE_like_bacteria 28.6 1E+02 0.0022 25.0 4.4 34 174-208 17-50 (175)
348 PF05707 Zot: Zonular occluden 28.3 65 0.0014 26.8 3.2 38 116-154 2-40 (193)
349 PF08433 KTI12: Chromatin asso 28.2 84 0.0018 27.9 4.0 40 115-154 2-41 (270)
350 cd07224 Pat_like Patatin-like 27.9 67 0.0015 27.7 3.3 35 174-208 16-51 (233)
351 PRK09435 membrane ATPase/prote 27.8 1.3E+02 0.0029 27.6 5.3 39 112-150 54-92 (332)
352 PF05673 DUF815: Protein of un 27.5 1E+02 0.0023 26.8 4.3 35 116-150 54-88 (249)
353 PRK07667 uridine kinase; Provi 27.4 1.6E+02 0.0034 24.5 5.3 42 112-153 15-56 (193)
354 COG0552 FtsY Signal recognitio 27.3 4.9E+02 0.011 24.0 8.5 83 129-219 208-292 (340)
355 PF08248 Tryp_FSAP: Tryptophyl 27.2 42 0.00091 13.8 0.9 8 54-61 2-9 (12)
356 PRK13256 thiopurine S-methyltr 27.1 64 0.0014 27.7 2.9 28 116-150 46-73 (226)
357 PRK01906 tetraacyldisaccharide 26.7 2E+02 0.0043 26.6 6.2 42 115-157 57-100 (338)
358 cd02037 MRP-like MRP (Multiple 26.5 1.3E+02 0.0028 24.2 4.6 39 116-154 2-40 (169)
359 cd02034 CooC The accessory pro 26.4 1.3E+02 0.0028 22.6 4.2 34 117-150 2-35 (116)
360 PRK10867 signal recognition pa 26.2 1.3E+02 0.0028 28.9 5.0 39 112-150 98-137 (433)
361 PF13439 Glyco_transf_4: Glyco 26.1 2.3E+02 0.0049 22.2 6.1 28 127-154 14-41 (177)
362 TIGR03708 poly_P_AMP_trns poly 26.1 85 0.0018 30.6 3.8 40 112-151 297-336 (493)
363 COG0552 FtsY Signal recognitio 26.0 1.3E+02 0.0028 27.5 4.7 37 112-148 137-173 (340)
364 PF00448 SRP54: SRP54-type pro 25.9 95 0.0021 26.0 3.7 75 132-218 73-147 (196)
365 cd02033 BchX Chlorophyllide re 25.9 1.7E+02 0.0036 26.9 5.5 40 112-151 29-68 (329)
366 cd07209 Pat_hypo_Ecoli_Z1214_l 25.8 73 0.0016 27.1 3.1 33 175-208 16-48 (215)
367 TIGR02816 pfaB_fam PfaB family 25.7 86 0.0019 31.0 3.9 28 181-208 260-287 (538)
368 cd01836 FeeA_FeeB_like SGNH_hy 25.7 2.5E+02 0.0053 22.9 6.3 28 165-192 86-113 (191)
369 COG0541 Ffh Signal recognition 25.5 2E+02 0.0042 27.5 5.9 76 132-219 172-247 (451)
370 cd07218 Pat_iPLA2 Calcium-inde 25.2 1.2E+02 0.0026 26.5 4.3 20 189-208 33-52 (245)
371 PF13191 AAA_16: AAA ATPase do 25.1 91 0.002 25.2 3.6 42 112-153 22-63 (185)
372 cd01714 ETF_beta The electron 24.9 3.5E+02 0.0077 22.7 7.0 62 136-209 70-136 (202)
373 PRK05506 bifunctional sulfate 24.8 1.1E+02 0.0025 31.0 4.7 38 112-149 458-495 (632)
374 PRK05568 flavodoxin; Provision 24.8 3.3E+02 0.0071 21.0 7.4 78 115-194 4-91 (142)
375 cd07021 Clp_protease_NfeD_like 24.6 3.6E+02 0.0078 22.1 6.8 78 116-206 3-81 (178)
376 PRK06171 sorbitol-6-phosphate 24.6 3.6E+02 0.0077 23.3 7.5 74 116-196 11-86 (266)
377 cd01834 SGNH_hydrolase_like_2 24.4 1.3E+02 0.0028 24.4 4.3 27 165-191 84-110 (191)
378 cd03115 SRP The signal recogni 24.3 1.5E+02 0.0032 23.9 4.6 36 116-151 2-37 (173)
379 cd07208 Pat_hypo_Ecoli_yjju_li 24.1 1.1E+02 0.0025 26.8 4.1 37 174-210 15-51 (266)
380 cd07205 Pat_PNPLA6_PNPLA7_NTE1 24.0 1E+02 0.0022 25.0 3.5 21 187-207 29-49 (175)
381 PHA02518 ParA-like protein; Pr 24.0 1.8E+02 0.0039 24.2 5.3 41 116-156 3-43 (211)
382 TIGR02764 spore_ybaN_pdaB poly 23.9 75 0.0016 26.3 2.8 36 114-149 152-188 (191)
383 PF06858 NOG1: Nucleolar GTP-b 23.9 2.1E+02 0.0046 18.5 5.2 40 141-191 14-53 (58)
384 PF00004 AAA: ATPase family as 23.7 1.2E+02 0.0026 22.7 3.8 56 117-182 1-56 (132)
385 TIGR00959 ffh signal recogniti 23.7 1.7E+02 0.0038 27.9 5.4 39 112-150 97-136 (428)
386 PRK00771 signal recognition pa 23.6 1.5E+02 0.0033 28.4 5.0 40 112-151 93-132 (437)
387 PRK13656 trans-2-enoyl-CoA red 23.5 1.4E+02 0.003 28.2 4.5 77 122-201 196-276 (398)
388 PRK10416 signal recognition pa 23.4 4.1E+02 0.009 24.2 7.6 74 137-218 191-266 (318)
389 TIGR03574 selen_PSTK L-seryl-t 23.4 1E+02 0.0022 26.8 3.6 34 116-149 1-34 (249)
390 TIGR01969 minD_arch cell divis 23.4 1.7E+02 0.0036 25.2 5.0 37 116-152 3-39 (251)
391 TIGR01968 minD_bact septum sit 23.2 1.7E+02 0.0037 25.3 5.1 38 115-152 3-40 (261)
392 PF04204 HTS: Homoserine O-suc 23.2 2.7E+02 0.0059 25.1 6.1 59 139-206 95-153 (298)
393 cd01825 SGNH_hydrolase_peri1 S 23.1 3.8E+02 0.0083 21.5 7.0 53 138-193 52-104 (189)
394 PLN02748 tRNA dimethylallyltra 22.9 2.2E+02 0.0047 27.7 5.9 78 112-194 20-120 (468)
395 COG3596 Predicted GTPase [Gene 22.6 4.8E+02 0.01 23.4 7.3 46 112-157 37-101 (296)
396 PF01734 Patatin: Patatin-like 22.5 93 0.002 25.2 3.2 23 186-208 27-49 (204)
397 PF03054 tRNA_Me_trans: tRNA m 22.4 41 0.00088 31.2 0.9 45 137-181 19-63 (356)
398 TIGR01287 nifH nitrogenase iro 22.3 1.9E+02 0.0042 25.4 5.3 39 118-156 4-42 (275)
399 cd02032 Bchl_like This family 22.3 1.5E+02 0.0032 26.1 4.5 35 121-155 7-41 (267)
400 TIGR00959 ffh signal recogniti 22.1 2.8E+02 0.0062 26.5 6.5 22 134-155 174-195 (428)
401 PF09140 MipZ: ATPase MipZ; I 22.1 1.7E+02 0.0036 25.7 4.4 42 115-156 2-43 (261)
402 cd03129 GAT1_Peptidase_E_like 22.0 3.2E+02 0.0069 22.9 6.3 90 112-203 28-130 (210)
403 TIGR00064 ftsY signal recognit 21.9 3.1E+02 0.0068 24.3 6.4 76 131-218 143-224 (272)
404 PRK12724 flagellar biosynthesi 21.7 4.5E+02 0.0098 25.2 7.5 75 135-218 292-366 (432)
405 cd02117 NifH_like This family 21.6 2.1E+02 0.0046 24.0 5.2 36 121-156 7-42 (212)
406 TIGR00632 vsr DNA mismatch end 21.5 3.1E+02 0.0068 20.8 5.3 14 135-148 100-113 (117)
407 COG3640 CooC CO dehydrogenase 21.5 1.7E+02 0.0036 25.4 4.3 66 116-183 2-70 (255)
408 TIGR00041 DTMP_kinase thymidyl 21.4 2.3E+02 0.0051 23.2 5.4 39 114-152 3-41 (195)
409 KOG0781 Signal recognition par 21.4 2.8E+02 0.006 26.9 6.0 75 117-204 442-516 (587)
410 TIGR01007 eps_fam capsular exo 21.2 2.6E+02 0.0056 23.2 5.6 38 114-151 18-55 (204)
411 KOG4022 Dihydropteridine reduc 20.9 4.6E+02 0.01 21.3 6.3 50 133-182 18-67 (236)
412 TIGR01281 DPOR_bchL light-inde 20.8 1.8E+02 0.004 25.4 4.8 35 121-155 7-41 (268)
413 PRK13529 malate dehydrogenase; 20.7 1.1E+02 0.0024 30.2 3.5 102 116-224 297-421 (563)
414 cd02042 ParA ParA and ParB of 20.6 2.1E+02 0.0047 20.4 4.4 28 124-151 10-37 (104)
415 PRK06762 hypothetical protein; 20.5 1.6E+02 0.0034 23.5 4.0 25 114-138 2-26 (166)
416 PRK06523 short chain dehydroge 20.5 5.5E+02 0.012 22.0 7.9 64 116-184 11-76 (260)
417 COG0541 Ffh Signal recognition 20.5 2E+02 0.0043 27.5 4.9 37 112-148 98-134 (451)
418 PRK13235 nifH nitrogenase redu 20.4 1.8E+02 0.0038 25.7 4.6 39 116-155 4-42 (274)
419 TIGR03018 pepcterm_TyrKin exop 20.3 3.1E+02 0.0068 22.9 5.9 40 112-151 34-74 (207)
420 PRK07952 DNA replication prote 20.3 1.7E+02 0.0037 25.5 4.3 34 116-149 101-134 (244)
421 KOG2728 Uncharacterized conser 20.3 5.9E+02 0.013 22.3 7.6 68 70-152 16-83 (302)
422 cd01822 Lysophospholipase_L1_l 20.3 4.4E+02 0.0096 20.8 6.9 26 165-192 83-108 (177)
423 COG2360 Aat Leu/Phe-tRNA-prote 20.2 43 0.00094 28.0 0.6 62 13-78 56-118 (221)
424 cd07204 Pat_PNPLA_like Patatin 20.1 1.6E+02 0.0035 25.5 4.2 20 189-208 34-53 (243)
No 1
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=100.00 E-value=1.3e-56 Score=397.51 Aligned_cols=358 Identities=39% Similarity=0.745 Sum_probs=315.0
Q ss_pred CCCCCCCCCCCccccccc-ccchhhhccccCCCCcCCCCCCChhhHHHHHHhhhcCCCCCCccEEEEEcCCCCEEEEEee
Q 015401 24 KAMPYNHPHPSLEVTGGA-LHTFLPALKTLSRPYSPFPVIGWNCHVETIFAAFFRSLPDVKLKRECIRTKDDGSVALDWI 102 (407)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~y~p~p~~~~~~~~qt~~~~~~~~~~~~~~~r~~~~~~dg~~~~~~~~ 102 (407)
..+.....++.....++. .+.++++|+.++.+|.| .+|+++||+||++..++++.|.+.|+|++++++|||.+++||.
T Consensus 33 ~~~~~~~~~~~l~~~~~~f~~~l~~~~~~l~~~y~p-~~w~~~ghlQT~~~~~~~~~p~~~y~Reii~~~DGG~~~lDW~ 111 (409)
T KOG1838|consen 33 LYLKSPPRKPSLFCGDSGFARFLVPKCPLLEEKYLP-TLWLFSGHLQTLLLSFFGSKPPVEYTREIIKTSDGGTVTLDWV 111 (409)
T ss_pred ceeeccCCCCeeecCchHHHHHHHhhcccccccccc-ceeecCCeeeeeehhhcCCCCCCcceeEEEEeCCCCEEEEeec
Confidence 445555556655655444 77788999999999999 5556999999999999999999999999999999999999999
Q ss_pred cCCCCCC---CCCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHH
Q 015401 103 SGDHQLL---PPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHV 179 (407)
Q Consensus 103 ~~~~~~~---~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l 179 (407)
.+..... ..+.|+||++||++|++.+.|++.++..+.++||+|+++|.||||+|+.+++..+...+++|+.++++++
T Consensus 112 ~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i 191 (409)
T KOG1838|consen 112 ENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRLFTAGWTEDLREVVNHI 191 (409)
T ss_pred cCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCCceeecCCHHHHHHHHHHH
Confidence 7654322 3577999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhCCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhc-chhHHHHHHHHHHHHHHHHHHHhh
Q 015401 180 GSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRK-GFNIVYDKALASALCRIFKKHALL 258 (407)
Q Consensus 180 ~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~ 258 (407)
+.+||.++++.+|+||||++.++|+++..+++++.+++.+|+|||+......+.. ..+.++.+.++..+.+++..+...
T Consensus 192 ~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~ 271 (409)
T KOG1838|consen 192 KKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIETPLYRRFYNRALTLNLKRIVLRHRHT 271 (409)
T ss_pred HHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHhcccchHHHHHHHHHhHHHHHhhhhhh
Confidence 9999999999999999999999999999999899999999999998755555444 457789999999999988888774
Q ss_pred hhhcCCCCCHHHHhcCCCHHHHhhccccccCCCCCHHHHHhhCCcchhcCCCccceeeeecCCCCCCCCCCCChhHHhcC
Q 015401 259 FEDMGGEFNIPLAANAKSVRQFDDGLTRVSFGFKSVDDYYSNSSSSDSIKHVRIPLLCIQAQNDPIAPSRGIPCEDIKAN 338 (407)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~ 338 (407)
+... ..+.+...+.+++++||+.++.+.+||++.++||.+.++..++.+|++|+|+|++.|||++|++.++......+
T Consensus 272 ~~~~--~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs~~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~n 349 (409)
T KOG1838|consen 272 LFED--PVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKKASSSNYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSN 349 (409)
T ss_pred hhhc--cchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhcchhhhcccccccEEEEecCCCCCCCcccCCHHHHhcC
Confidence 4332 23445566779999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHHHHHhcCCC
Q 015401 339 PNCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEHLERASSNA 385 (407)
Q Consensus 339 ~~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~~~~~~~~~ 385 (407)
|++-+++...|||++|+|+-.. ....|+.+.+.+|+..........
T Consensus 350 p~v~l~~T~~GGHlgfleg~~p-~~~~w~~~~l~ef~~~~~~~~~~~ 395 (409)
T KOG1838|consen 350 PNVLLVITSHGGHLGFLEGLWP-SARTWMDKLLVEFLGNAIFQDEVG 395 (409)
T ss_pred CcEEEEEeCCCceeeeeccCCC-ccchhHHHHHHHHHHHHHhhhccc
Confidence 9999999999999999999433 568899988999999887655433
No 2
>PLN02511 hydrolase
Probab=100.00 E-value=6.4e-54 Score=398.64 Aligned_cols=354 Identities=77% Similarity=1.321 Sum_probs=299.9
Q ss_pred CCCCcccccccccchhhhccccCCCCcCCCCCCChhhHHHHHHhhhcCCCCCCccEEEEEcCCCCEEEEEeecCCCCCCC
Q 015401 31 PHPSLEVTGGALHTFLPALKTLSRPYSPFPVIGWNCHVETIFAAFFRSLPDVKLKRECIRTKDDGSVALDWISGDHQLLP 110 (407)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~l~~~y~p~p~~~~~~~~qt~~~~~~~~~~~~~~~r~~~~~~dg~~~~~~~~~~~~~~~~ 110 (407)
+....++.++..+.++++|++|..+|+|+||+ +|||+||+|..++++.+.+.++|+.+.++||+.+.++|........+
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~~y~p~~wl-~n~h~qT~~~~~~~~~~~~~~~re~l~~~DG~~~~ldw~~~~~~~~~ 97 (388)
T PLN02511 19 EHSSLEVIGGGRDSFLPKFKSLERPYDAFPLL-GNRHVETIFASFFRSLPAVRYRRECLRTPDGGAVALDWVSGDDRALP 97 (388)
T ss_pred CccceeeccchHHHHHHhhhhhcCCccCCccC-CCccHHHhhHHHhcCCCCCceeEEEEECCCCCEEEEEecCcccccCC
Confidence 44555666777888899999999999998765 89999999999998888899999999999999999999764322234
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEE
Q 015401 111 PDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYA 190 (407)
Q Consensus 111 ~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~l 190 (407)
.++|+||++||++|++.+.|+..++..++++||+|+++|+||||+|+...+.++...+++|+.+++++++.++++.++++
T Consensus 98 ~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~~~l 177 (388)
T PLN02511 98 ADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQFYSASFTGDLRQVVDHVAGRYPSANLYA 177 (388)
T ss_pred CCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcCEEcCCchHHHHHHHHHHHHHCCCCCEEE
Confidence 57899999999999887778778888888999999999999999998776777788999999999999999998889999
Q ss_pred EEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHH
Q 015401 191 VGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNIVYDKALASALCRIFKKHALLFEDMGGEFNIPL 270 (407)
Q Consensus 191 vG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 270 (407)
+||||||++++.|+++++++.+|.+++++++|+++......+..++...+...+...+++....+...+......++...
T Consensus 178 vG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 257 (388)
T PLN02511 178 AGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKGFNNVYDKALAKALRKIFAKHALLFEGLGGEYNIPL 257 (388)
T ss_pred EEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCHHH
Confidence 99999999999999999987668999999999987666666666666677777776666665554444444443455556
Q ss_pred HhcCCCHHHHhhccccccCCCCCHHHHHhhCCcchhcCCCccceeeeecCCCCCCCCCCCChhHHhcCCCeEEEEcCCCC
Q 015401 271 AANAKSVRQFDDGLTRVSFGFKSVDDYYSNSSSSDSIKHVRIPLLCIQAQNDPIAPSRGIPCEDIKANPNCLLILTPKGG 350 (407)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~g 350 (407)
......+.+|++.++...+++.+..+||...+....+++|++|+|+|+|++|++++.+..+....+.++++++++++++|
T Consensus 258 ~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~~~l~~~~~gG 337 (388)
T PLN02511 258 VANAKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKANPNCLLIVTPSGG 337 (388)
T ss_pred HHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcCCCEEEEECCCcc
Confidence 66778899999999999999999999999999999999999999999999999999886655566789999999999999
Q ss_pred ceeecCCCCCCCCCCCcHHHHHHHHHHHHHhcCCC
Q 015401 351 HLGWVAGPEAPFGSPWTDPVVMDFLEHLERASSNA 385 (407)
Q Consensus 351 H~~~~~~p~~~~~~~w~~~~i~~fl~~~~~~~~~~ 385 (407)
|++++|+|+...+.+|+++.+.+||+.+.+....+
T Consensus 338 H~~~~E~p~~~~~~~w~~~~i~~Fl~~~~~~~~~~ 372 (388)
T PLN02511 338 HLGWVAGPEAPFGAPWTDPVVMEFLEALEEGKSST 372 (388)
T ss_pred eeccccCCCCCCCCccHHHHHHHHHHHHHHhcccc
Confidence 99999999765567899999999999988766443
No 3
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=100.00 E-value=6.4e-53 Score=360.18 Aligned_cols=324 Identities=33% Similarity=0.615 Sum_probs=291.0
Q ss_pred CCCCcCCCCCCChhhHHHHHH--hhhcCCCCCCccEEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHH
Q 015401 53 SRPYSPFPVIGWNCHVETIFA--AFFRSLPDVKLKRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSY 130 (407)
Q Consensus 53 ~~~y~p~p~~~~~~~~qt~~~--~~~~~~~~~~~~r~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~ 130 (407)
..+|.|.|||++|||+||++. ..+++...+.++|+.+.++||+.+.++|...+. ...+|.||++||+.|++++.|
T Consensus 16 ~~~f~p~~~~L~ng~lqTl~~~~~~frr~~~~~~~re~v~~pdg~~~~ldw~~~p~---~~~~P~vVl~HGL~G~s~s~y 92 (345)
T COG0429 16 SPPFDPLPWGLFNGHLQTLYPSLRLFRRKPKVAYTRERLETPDGGFIDLDWSEDPR---AAKKPLVVLFHGLEGSSNSPY 92 (345)
T ss_pred cCcCCCCcccccCcchhhhhhhHHHhhcccccccceEEEEcCCCCEEEEeeccCcc---ccCCceEEEEeccCCCCcCHH
Confidence 456777788889999999999 568999999999999999999999999987542 346799999999999999999
Q ss_pred HHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCC
Q 015401 131 VRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHS 210 (407)
Q Consensus 131 ~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~ 210 (407)
.+.+...+.++||.|+++|+|||+++....+..+...+++|++.++++++..++..++..||+|+||.+.++|.++..+.
T Consensus 93 ~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d 172 (345)
T COG0429 93 ARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHSGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDD 172 (345)
T ss_pred HHHHHHHHHhcCCeEEEEecccccCCcccCcceecccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccC
Confidence 99999999999999999999999999998999999999999999999999999999999999999999999999999998
Q ss_pred CCceeEEEEcCCCCHHHHHHHHhcchh-HHHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHhcCCCHHHHhhccccccC
Q 015401 211 CPLSGAVSLCNPFNLVIADQDFRKGFN-IVYDKALASALCRIFKKHALLFEDMGGEFNIPLAANAKSVRQFDDGLTRVSF 289 (407)
Q Consensus 211 ~~v~~~v~l~~p~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (407)
+++.+++.++.|+|+..+...+.+++. .++.+.+.+.+.+.+..+...++..-...........+++++||+.++.+.+
T Consensus 173 ~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~ 252 (345)
T COG0429 173 LPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSRYLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLH 252 (345)
T ss_pred cccceeeeeeCHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeeccc
Confidence 889999999999999999999999988 8999999999999888877666322211125567788999999999999999
Q ss_pred CCCCHHHHHhhCCcchhcCCCccceeeeecCCCCCCCCCCCChhHHhcCCCeEEEEcCCCCceeecCCCCCCCCCCCcHH
Q 015401 290 GFKSVDDYYSNSSSSDSIKHVRIPLLCIQAQNDPIAPSRGIPCEDIKANPNCLLILTPKGGHLGWVAGPEAPFGSPWTDP 369 (407)
Q Consensus 290 ~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~ 369 (407)
||+++.+||+++|+...+++|++|+|||++.|||+++++.+++.....+|++.+...+.|||++++.+... ...-|..+
T Consensus 253 Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~-~~~~W~~~ 331 (345)
T COG0429 253 GFADAEDYYRQASSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLL-HPQMWLEQ 331 (345)
T ss_pred CCCcHHHHHHhccccccccccccceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccc-cchhhHHH
Confidence 99999999999999999999999999999999999999988866666999999999999999999997543 12239999
Q ss_pred HHHHHHHHHHH
Q 015401 370 VVMDFLEHLER 380 (407)
Q Consensus 370 ~i~~fl~~~~~ 380 (407)
.+.+|++...+
T Consensus 332 ri~~~l~~~~~ 342 (345)
T COG0429 332 RILDWLDPFLE 342 (345)
T ss_pred HHHHHHHHHHh
Confidence 99999998754
No 4
>PRK10985 putative hydrolase; Provisional
Probab=100.00 E-value=3.8e-45 Score=333.59 Aligned_cols=321 Identities=26% Similarity=0.423 Sum_probs=262.8
Q ss_pred CCCCcCCCCCCChhhHHHHHHhhhcCCCCCCccEEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHHHH
Q 015401 53 SRPYSPFPVIGWNCHVETIFAAFFRSLPDVKLKRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVR 132 (407)
Q Consensus 53 ~~~y~p~p~~~~~~~~qt~~~~~~~~~~~~~~~r~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~ 132 (407)
+++|.|+||+ .|+|+||++..++++.+.+.+.++.++++||+.+.++|..... .+..+|+||++||++|++.+.|+.
T Consensus 1 ~~~~~p~~~~-~~~h~qt~~~~~~~~~~~~~~~~~~~~~~dg~~~~l~w~~~~~--~~~~~p~vll~HG~~g~~~~~~~~ 77 (324)
T PRK10985 1 SAEFTPMRGA-SNPHLQTLLPRLIRRKVLFTPYWQRLELPDGDFVDLAWSEDPA--QARHKPRLVLFHGLEGSFNSPYAH 77 (324)
T ss_pred CCCCCCCcCC-CCCcHHHhhHHHhcCCCCCCcceeEEECCCCCEEEEecCCCCc--cCCCCCEEEEeCCCCCCCcCHHHH
Confidence 3689997765 9999999999999988889999999999999999999965331 234679999999999887777878
Q ss_pred HHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCCCC
Q 015401 133 HMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCP 212 (407)
Q Consensus 133 ~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~ 212 (407)
.++..+.++||+|+++|+||||.++......+.....+|+..++++++.+++..+++++||||||.+++.+++++++...
T Consensus 78 ~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~ 157 (324)
T PRK10985 78 GLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLP 157 (324)
T ss_pred HHHHHHHHCCCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCC
Confidence 88889999999999999999998875545555666789999999999988888899999999999999999998876544
Q ss_pred ceeEEEEcCCCCHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHhcCCCHHHHhhccccccCCCC
Q 015401 213 LSGAVSLCNPFNLVIADQDFRKGFNIVYDKALASALCRIFKKHALLFEDMGGEFNIPLAANAKSVRQFDDGLTRVSFGFK 292 (407)
Q Consensus 213 v~~~v~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (407)
+.++|++++|+++......+...+...+...+...+..........+.... ..+.......+++++|++.++.+..++.
T Consensus 158 ~~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~fd~~~~~~~~g~~ 236 (324)
T PRK10985 158 LDAAVIVSAPLMLEACSYRMEQGFSRVYQRYLLNLLKANAARKLAAYPGTL-PINLAQLKSVRRLREFDDLITARIHGFA 236 (324)
T ss_pred ccEEEEEcCCCCHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhccccc-cCCHHHHhcCCcHHHHhhhheeccCCCC
Confidence 899999999999877666666655556666666655554433322222211 2344556777899999999999999999
Q ss_pred CHHHHHhhCCcchhcCCCccceeeeecCCCCCCCCCCCChhHHhcCCCeEEEEcCCCCceeecCCCCCCCCCCCcHHHHH
Q 015401 293 SVDDYYSNSSSSDSIKHVRIPLLCIQAQNDPIAPSRGIPCEDIKANPNCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVM 372 (407)
Q Consensus 293 ~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~ 372 (407)
+..+||...+....+++|++|+++|+|++|++++++.. ..+.+..+++++++++++||++++++... ...+|+.+.+.
T Consensus 237 ~~~~~y~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~GH~~~~~g~~~-~~~~w~~~~~~ 314 (324)
T PRK10985 237 DAIDYYRQCSALPLLNQIRKPTLIIHAKDDPFMTHEVI-PKPESLPPNVEYQLTEHGGHVGFVGGTLL-KPQMWLEQRIP 314 (324)
T ss_pred CHHHHHHHCChHHHHhCCCCCEEEEecCCCCCCChhhC-hHHHHhCCCeEEEECCCCCceeeCCCCCC-CCCccHHHHHH
Confidence 99999999998899999999999999999999998766 34567788999999999999999998532 24789999999
Q ss_pred HHHHHHH
Q 015401 373 DFLEHLE 379 (407)
Q Consensus 373 ~fl~~~~ 379 (407)
+|+....
T Consensus 315 ~~~~~~~ 321 (324)
T PRK10985 315 DWLTTYL 321 (324)
T ss_pred HHHHHhh
Confidence 9997653
No 5
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.96 E-value=3.6e-29 Score=227.07 Aligned_cols=271 Identities=17% Similarity=0.201 Sum_probs=166.9
Q ss_pred hcCCCCCCccEEEEEcCC--CCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCC
Q 015401 76 FRSLPDVKLKRECIRTKD--DGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGC 153 (407)
Q Consensus 76 ~~~~~~~~~~r~~~~~~d--g~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~ 153 (407)
+...+..++...++...+ |+...+.|...++ +++|+|||+||+++++. .| ..++..|.++||+|+++|+|||
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~i~y~~~G~----~~~~~lvliHG~~~~~~-~w-~~~~~~L~~~gy~vi~~Dl~G~ 84 (302)
T PRK00870 11 FENLPDYPFAPHYVDVDDGDGGPLRMHYVDEGP----ADGPPVLLLHGEPSWSY-LY-RKMIPILAAAGHRVIAPDLIGF 84 (302)
T ss_pred ccCCcCCCCCceeEeecCCCCceEEEEEEecCC----CCCCEEEEECCCCCchh-hH-HHHHHHHHhCCCEEEEECCCCC
Confidence 445566777777787776 5556666655431 24689999999976543 44 6777777778999999999999
Q ss_pred CCCCCCC--CCcccCCChhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHH--H
Q 015401 154 GDSPVTT--PQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIA--D 229 (407)
Q Consensus 154 G~S~~~~--~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~--~ 229 (407)
|.|+.+. ..++.+.+++|+.++++++... +++++||||||.+++.+|.++|++ |.++|++++....... .
T Consensus 85 G~S~~~~~~~~~~~~~~a~~l~~~l~~l~~~----~v~lvGhS~Gg~ia~~~a~~~p~~--v~~lvl~~~~~~~~~~~~~ 158 (302)
T PRK00870 85 GRSDKPTRREDYTYARHVEWMRSWFEQLDLT----DVTLVCQDWGGLIGLRLAAEHPDR--FARLVVANTGLPTGDGPMP 158 (302)
T ss_pred CCCCCCCCcccCCHHHHHHHHHHHHHHcCCC----CEEEEEEChHHHHHHHHHHhChhh--eeEEEEeCCCCCCccccch
Confidence 9997543 2356677888888888887665 899999999999999999999998 9999999864321100 0
Q ss_pred HHHhcchhHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHhc----------CCCHHHHhhccccccCCCCCHHHHHh
Q 015401 230 QDFRKGFNIVYDKALASALCRIFKKHALLFEDMGGEFNIPLAAN----------AKSVRQFDDGLTRVSFGFKSVDDYYS 299 (407)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (407)
..+.. +...........+...... ............. ......+.... . .+..... ...
T Consensus 159 ~~~~~-~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~-~~~ 227 (302)
T PRK00870 159 DAFWA-WRAFSQYSPVLPVGRLVNG------GTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLV-P--TSPDDPA-VAA 227 (302)
T ss_pred HHHhh-hhcccccCchhhHHHHhhc------cccccCCHHHHHHhhcccCChhhhcchhhhhhcC-C--CCCCCcc-hHH
Confidence 00000 0000000000000000000 0000000000000 00000000000 0 0000000 000
Q ss_pred hCCcchhcCCCccceeeeecCCCCCCCCCCCChhHHhcCCCeE---EEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHH
Q 015401 300 NSSSSDSIKHVRIPLLCIQAQNDPIAPSRGIPCEDIKANPNCL---LILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLE 376 (407)
Q Consensus 300 ~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~---~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~ 376 (407)
.......+.++++|+++|+|++|++++... +.+.+..++.+ +.+++++||+.++++|+. +++.|.+|++
T Consensus 228 ~~~~~~~l~~i~~P~lii~G~~D~~~~~~~--~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~------~~~~l~~fl~ 299 (302)
T PRK00870 228 NRAAWAVLERWDKPFLTAFSDSDPITGGGD--AILQKRIPGAAGQPHPTIKGAGHFLQEDSGEE------LAEAVLEFIR 299 (302)
T ss_pred HHHHHHhhhcCCCceEEEecCCCCcccCch--HHHHhhcccccccceeeecCCCccchhhChHH------HHHHHHHHHh
Confidence 001124578899999999999999998754 56777788776 889999999999999988 9999999996
Q ss_pred H
Q 015401 377 H 377 (407)
Q Consensus 377 ~ 377 (407)
.
T Consensus 300 ~ 300 (302)
T PRK00870 300 A 300 (302)
T ss_pred c
Confidence 5
No 6
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.96 E-value=7.2e-29 Score=224.34 Aligned_cols=264 Identities=15% Similarity=0.202 Sum_probs=159.0
Q ss_pred CccEEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCC--
Q 015401 83 KLKRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTT-- 160 (407)
Q Consensus 83 ~~~r~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~-- 160 (407)
..+.++++.. |..+.+. ..++ ++|+|||+||+++++. .| ..++..+.+ .|+|+++|+||||.|+.+.
T Consensus 7 ~~~~~~~~~~-~~~i~y~--~~G~-----~~~~vlllHG~~~~~~-~w-~~~~~~L~~-~~~vi~~DlpG~G~S~~~~~~ 75 (294)
T PLN02824 7 QVETRTWRWK-GYNIRYQ--RAGT-----SGPALVLVHGFGGNAD-HW-RKNTPVLAK-SHRVYAIDLLGYGYSDKPNPR 75 (294)
T ss_pred CCCCceEEEc-CeEEEEE--EcCC-----CCCeEEEECCCCCChh-HH-HHHHHHHHh-CCeEEEEcCCCCCCCCCCccc
Confidence 3344555553 4445443 2221 3588999999987665 44 566666654 5799999999999998643
Q ss_pred -----CCcccCCChhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHH------HH
Q 015401 161 -----PQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVI------AD 229 (407)
Q Consensus 161 -----~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~------~~ 229 (407)
..++.+++++|+.++++.+..+ +++++||||||.+++.+|.++|++ |+++|+++++..... ..
T Consensus 76 ~~~~~~~~~~~~~a~~l~~~l~~l~~~----~~~lvGhS~Gg~va~~~a~~~p~~--v~~lili~~~~~~~~~~~~~~~~ 149 (294)
T PLN02824 76 SAPPNSFYTFETWGEQLNDFCSDVVGD----PAFVICNSVGGVVGLQAAVDAPEL--VRGVMLINISLRGLHIKKQPWLG 149 (294)
T ss_pred cccccccCCHHHHHHHHHHHHHHhcCC----CeEEEEeCHHHHHHHHHHHhChhh--eeEEEEECCCcccccccccchhh
Confidence 2366778899999999988765 999999999999999999999999 999999987532110 00
Q ss_pred HHHhcchhHHHH-HHHHHHHHHHH---HHHHhhhhh-cC--CCCCHHHHhcCCCHHHHhhccccccCCCCCHHHHHh---
Q 015401 230 QDFRKGFNIVYD-KALASALCRIF---KKHALLFED-MG--GEFNIPLAANAKSVRQFDDGLTRVSFGFKSVDDYYS--- 299 (407)
Q Consensus 230 ~~~~~~~~~~~~-~~~~~~l~~~~---~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 299 (407)
......+..... ......+.... ......... .. ....... ...+........ .......+..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~~ 222 (294)
T PLN02824 150 RPFIKAFQNLLRETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDEL------VEAILRPGLEPG-AVDVFLDFISYSG 222 (294)
T ss_pred hHHHHHHHHHHhchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHH------HHHHHhccCCch-HHHHHHHHhcccc
Confidence 000000000000 00000000000 000000000 00 0000000 000000000000 0000001110
Q ss_pred hCCcchhcCCCccceeeeecCCCCCCCCCCCChhHHhcCCCeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHH
Q 015401 300 NSSSSDSIKHVRIPLLCIQAQNDPIAPSRGIPCEDIKANPNCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEH 377 (407)
Q Consensus 300 ~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~ 377 (407)
.......+.+|++|+++|+|++|.+++.+.. +.+.+..++.++++++++||++++|+|+. +++.|.+|+++
T Consensus 223 ~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~-~~~~~~~~~~~~~~i~~~gH~~~~e~p~~------~~~~i~~fl~~ 293 (294)
T PLN02824 223 GPLPEELLPAVKCPVLIAWGEKDPWEPVELG-RAYANFDAVEDFIVLPGVGHCPQDEAPEL------VNPLIESFVAR 293 (294)
T ss_pred ccchHHHHhhcCCCeEEEEecCCCCCChHHH-HHHHhcCCccceEEeCCCCCChhhhCHHH------HHHHHHHHHhc
Confidence 0112345788999999999999999998765 45667778889999999999999999998 99999999975
No 7
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.96 E-value=2e-28 Score=221.62 Aligned_cols=267 Identities=13% Similarity=0.139 Sum_probs=160.3
Q ss_pred ccEEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCc
Q 015401 84 LKRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQF 163 (407)
Q Consensus 84 ~~r~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~ 163 (407)
++.+.++. +|..+.+ ...+ ++++|||+||++++.. .| ..++..|.+. |+|+++|+||||.|+.+...+
T Consensus 7 ~~~~~~~~-~g~~i~y--~~~G------~g~~vvllHG~~~~~~-~w-~~~~~~L~~~-~~via~D~~G~G~S~~~~~~~ 74 (295)
T PRK03592 7 GEMRRVEV-LGSRMAY--IETG------EGDPIVFLHGNPTSSY-LW-RNIIPHLAGL-GRCLAPDLIGMGASDKPDIDY 74 (295)
T ss_pred CcceEEEE-CCEEEEE--EEeC------CCCEEEEECCCCCCHH-HH-HHHHHHHhhC-CEEEEEcCCCCCCCCCCCCCC
Confidence 34455554 5545544 3333 4578999999976553 44 5666666665 599999999999998766667
Q ss_pred ccCCChhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchhHHHHHH
Q 015401 164 YSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNIVYDKA 243 (407)
Q Consensus 164 ~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~~~~~~ 243 (407)
+...+++|+.++++.+... +++++||||||.+++.++.++|++ |+++|+++++...... ..+.......+...
T Consensus 75 ~~~~~a~dl~~ll~~l~~~----~~~lvGhS~Gg~ia~~~a~~~p~~--v~~lil~~~~~~~~~~-~~~~~~~~~~~~~~ 147 (295)
T PRK03592 75 TFADHARYLDAWFDALGLD----DVVLVGHDWGSALGFDWAARHPDR--VRGIAFMEAIVRPMTW-DDFPPAVRELFQAL 147 (295)
T ss_pred CHHHHHHHHHHHHHHhCCC----CeEEEEECHHHHHHHHHHHhChhh--eeEEEEECCCCCCcch-hhcchhHHHHHHHH
Confidence 7788899999999998765 999999999999999999999999 9999999974321100 00000000000000
Q ss_pred HHHHH-HHHHHHHHhhhhhcC-C----CCCHHHHh-------cCCC---HHHHhhccccccCCCC-CHHHHHhhCCcchh
Q 015401 244 LASAL-CRIFKKHALLFEDMG-G----EFNIPLAA-------NAKS---VRQFDDGLTRVSFGFK-SVDDYYSNSSSSDS 306 (407)
Q Consensus 244 ~~~~l-~~~~~~~~~~~~~~~-~----~~~~~~~~-------~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 306 (407)
..... ............... . ........ .... ...+....... +.. .....+ .+....
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~ 223 (295)
T PRK03592 148 RSPGEGEEMVLEENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPID--GEPADVVALV--EEYAQW 223 (295)
T ss_pred hCcccccccccchhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCC--CcchhhHhhh--hHhHHH
Confidence 00000 000000000000000 0 00000000 0000 00010000000 000 000000 112345
Q ss_pred cCCCccceeeeecCCCCCCCCCCCChhHHhcCCCeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHHHH
Q 015401 307 IKHVRIPLLCIQAQNDPIAPSRGIPCEDIKANPNCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEHLE 379 (407)
Q Consensus 307 l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~~~ 379 (407)
+.+|++|+|+|+|++|.++++....+...+..++.++++++++||++++++|++ +++.|.+|+++..
T Consensus 224 l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~------v~~~i~~fl~~~~ 290 (295)
T PRK03592 224 LATSDVPKLLINAEPGAILTTGAIRDWCRSWPNQLEITVFGAGLHFAQEDSPEE------IGAAIAAWLRRLR 290 (295)
T ss_pred hccCCCCeEEEeccCCcccCcHHHHHHHHHhhhhcceeeccCcchhhhhcCHHH------HHHHHHHHHHHhc
Confidence 788999999999999999965544344445678999999999999999999998 9999999998764
No 8
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.96 E-value=1.6e-27 Score=220.22 Aligned_cols=279 Identities=11% Similarity=0.126 Sum_probs=166.9
Q ss_pred CCCccEEEEEcCCCCEEEEE-eecCCCCCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCC
Q 015401 81 DVKLKRECIRTKDDGSVALD-WISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVT 159 (407)
Q Consensus 81 ~~~~~r~~~~~~dg~~~~~~-~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~ 159 (407)
.+.+++.++...||..+.+. |.+.+ ...+++|||+||++++.. .|+..++..+.+.||+|+++|+||||.|+..
T Consensus 58 ~~~~~~~~~~~~~g~~l~~~~~~p~~----~~~~~~iv~lHG~~~~~~-~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~ 132 (349)
T PLN02385 58 GIKTEESYEVNSRGVEIFSKSWLPEN----SRPKAAVCFCHGYGDTCT-FFFEGIARKIASSGYGVFAMDYPGFGLSEGL 132 (349)
T ss_pred CcceeeeeEEcCCCCEEEEEEEecCC----CCCCeEEEEECCCCCccc-hHHHHHHHHHHhCCCEEEEecCCCCCCCCCC
Confidence 34455666777888777654 54332 135789999999976543 5556777788888999999999999999764
Q ss_pred CCC-cccCCChhHHHHHHHHHHhh--CCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcch
Q 015401 160 TPQ-FYSASFLGDMQEVVAHVGSK--YPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGF 236 (407)
Q Consensus 160 ~~~-~~~~~~~~Dl~~~l~~l~~~--~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~ 236 (407)
... .+.+.+++|+.++++.+... ++..+++++||||||++++.++.++|+. ++++|++++........ . .
T Consensus 133 ~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~--v~glVLi~p~~~~~~~~---~-~- 205 (349)
T PLN02385 133 HGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNA--WDGAILVAPMCKIADDV---V-P- 205 (349)
T ss_pred CCCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcch--hhheeEecccccccccc---c-C-
Confidence 322 34567788999998888753 3445899999999999999999999998 99999998754321000 0 0
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhh--cCCC-CCHHHHhcCCCHHHHhhccccccCCCCCHHHHHhh-CCcchhcCCCcc
Q 015401 237 NIVYDKALASALCRIFKKHALLFED--MGGE-FNIPLAANAKSVRQFDDGLTRVSFGFKSVDDYYSN-SSSSDSIKHVRI 312 (407)
Q Consensus 237 ~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~ 312 (407)
...... +...+...... ...... .... +.... ......+...............+.+.. .+....+.+|++
T Consensus 206 ~~~~~~-~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~ 280 (349)
T PLN02385 206 PPLVLQ-ILILLANLLPK-AKLVPQKDLAELAFRDLK---KRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSL 280 (349)
T ss_pred chHHHH-HHHHHHHHCCC-ceecCCCccccccccCHH---HHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCC
Confidence 000000 00000000000 000000 0000 00000 000000000000000011111122221 123456788999
Q ss_pred ceeeeecCCCCCCCCCCCChhHHhcC--CCeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHHHH
Q 015401 313 PLLCIQAQNDPIAPSRGIPCEDIKAN--PNCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEHLE 379 (407)
Q Consensus 313 Pvlii~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~~~ 379 (407)
|+|+|+|++|.+++++.. +.+.+.. +++++++++++||..+.+.|++. ..-+.+.|.+||++..
T Consensus 281 P~Lii~G~~D~vv~~~~~-~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~--~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 281 PLLILHGEADKVTDPSVS-KFLYEKASSSDKKLKLYEDAYHSILEGEPDEM--IFQVLDDIISWLDSHS 346 (349)
T ss_pred CEEEEEeCCCCccChHHH-HHHHHHcCCCCceEEEeCCCeeecccCCChhh--HHHHHHHHHHHHHHhc
Confidence 999999999999998765 4444443 67899999999999998988741 0004566778887653
No 9
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.96 E-value=5.4e-28 Score=216.51 Aligned_cols=259 Identities=17% Similarity=0.228 Sum_probs=161.8
Q ss_pred EEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCC
Q 015401 88 CIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSAS 167 (407)
Q Consensus 88 ~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~ 167 (407)
++++ +|..+.+....+++ ++++|||+||+++++. .| ..++..| .++|+|+++|+||||.|+.+...++.+.
T Consensus 6 ~~~~-~~~~~~~~~~~~~~-----~~~plvllHG~~~~~~-~w-~~~~~~L-~~~~~vi~~Dl~G~G~S~~~~~~~~~~~ 76 (276)
T TIGR02240 6 TIDL-DGQSIRTAVRPGKE-----GLTPLLIFNGIGANLE-LV-FPFIEAL-DPDLEVIAFDVPGVGGSSTPRHPYRFPG 76 (276)
T ss_pred Eecc-CCcEEEEEEecCCC-----CCCcEEEEeCCCcchH-HH-HHHHHHh-ccCceEEEECCCCCCCCCCCCCcCcHHH
Confidence 3444 55566664332221 4578999999977654 44 5555554 5689999999999999986555567788
Q ss_pred ChhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchhHHHHHHHHHH
Q 015401 168 FLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNIVYDKALASA 247 (407)
Q Consensus 168 ~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (407)
+++|+.++++.+..+ +++|+||||||.+++.+|.++|++ |+++|+++++...... ........ .+..
T Consensus 77 ~~~~~~~~i~~l~~~----~~~LvG~S~GG~va~~~a~~~p~~--v~~lvl~~~~~~~~~~-----~~~~~~~~-~~~~- 143 (276)
T TIGR02240 77 LAKLAARMLDYLDYG----QVNAIGVSWGGALAQQFAHDYPER--CKKLILAATAAGAVMV-----PGKPKVLM-MMAS- 143 (276)
T ss_pred HHHHHHHHHHHhCcC----ceEEEEECHHHHHHHHHHHHCHHH--hhheEEeccCCccccC-----CCchhHHH-HhcC-
Confidence 899999999998765 899999999999999999999998 9999999876532100 00000000 0000
Q ss_pred HHHHHHHHH--hhhhh-cCCCCCHHHHhcCCCHHHHhhccccccCCCCCHHHHHh--hCCcchhcCCCccceeeeecCCC
Q 015401 248 LCRIFKKHA--LLFED-MGGEFNIPLAANAKSVRQFDDGLTRVSFGFKSVDDYYS--NSSSSDSIKHVRIPLLCIQAQND 322 (407)
Q Consensus 248 l~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~i~~Pvlii~g~~D 322 (407)
......... ..... ...... ........+...... .........+.. ..+....+.+|++|+|+|+|++|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D 218 (276)
T TIGR02240 144 PRRYIQPSHGIHIAPDIYGGAFR----RDPELAMAHASKVRS-GGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDD 218 (276)
T ss_pred chhhhccccccchhhhhccceee----ccchhhhhhhhhccc-CCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCC
Confidence 000000000 00000 000000 000000000000000 000000111111 11223557899999999999999
Q ss_pred CCCCCCCCChhHHhcCCCeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHHHHHh
Q 015401 323 PIAPSRGIPCEDIKANPNCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEHLERA 381 (407)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~~~~~ 381 (407)
++++++.. +.+.+..+++++++++ +||+.+.++|++ +++.|.+|+++....
T Consensus 219 ~~v~~~~~-~~l~~~~~~~~~~~i~-~gH~~~~e~p~~------~~~~i~~fl~~~~~~ 269 (276)
T TIGR02240 219 PIIPLINM-RLLAWRIPNAELHIID-DGHLFLITRAEA------VAPIIMKFLAEERQR 269 (276)
T ss_pred CcCCHHHH-HHHHHhCCCCEEEEEc-CCCchhhccHHH------HHHHHHHHHHHhhhh
Confidence 99998865 5677888999999997 599999999998 999999999886543
No 10
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.95 E-value=8.2e-27 Score=214.26 Aligned_cols=279 Identities=11% Similarity=0.124 Sum_probs=167.7
Q ss_pred CCccEEEEEcCCCCEEEEE-eecCCCCCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCC
Q 015401 82 VKLKRECIRTKDDGSVALD-WISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTT 160 (407)
Q Consensus 82 ~~~~r~~~~~~dg~~~~~~-~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~ 160 (407)
+.++...+...||..+.++ |.++.. .+.+++|||+||++++.. .++..+...|.++||+|+++|+||||.|+...
T Consensus 30 ~~~~~~~~~~~dg~~l~~~~~~~~~~---~~~~~~VvllHG~~~~~~-~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~ 105 (330)
T PLN02298 30 IKGSKSFFTSPRGLSLFTRSWLPSSS---SPPRALIFMVHGYGNDIS-WTFQSTAIFLAQMGFACFALDLEGHGRSEGLR 105 (330)
T ss_pred CccccceEEcCCCCEEEEEEEecCCC---CCCceEEEEEcCCCCCcc-eehhHHHHHHHhCCCEEEEecCCCCCCCCCcc
Confidence 5667888999999999885 543321 135688999999965432 22355566788889999999999999997432
Q ss_pred C-CcccCCChhHHHHHHHHHHhh--CCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchh
Q 015401 161 P-QFYSASFLGDMQEVVAHVGSK--YPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFN 237 (407)
Q Consensus 161 ~-~~~~~~~~~Dl~~~l~~l~~~--~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~ 237 (407)
. ....+.+++|+.++++.++.. ++..+++++||||||.+++.++.++|++ |+++|++++....... ....
T Consensus 106 ~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~--v~~lvl~~~~~~~~~~---~~~~-- 178 (330)
T PLN02298 106 AYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEG--FDGAVLVAPMCKISDK---IRPP-- 178 (330)
T ss_pred ccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCccc--ceeEEEecccccCCcc---cCCc--
Confidence 2 234556789999999999864 3345899999999999999999999998 9999999875432110 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHhcCCCHHHHhhccccccCCCCC---HHHHHhhCC-cchhcCCCccc
Q 015401 238 IVYDKALASALCRIFKKHALLFEDMGGEFNIPLAANAKSVRQFDDGLTRVSFGFKS---VDDYYSNSS-SSDSIKHVRIP 313 (407)
Q Consensus 238 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~l~~i~~P 313 (407)
.... .+...+...... ...... ..... ..........+...-.....+... ....+...+ ....+.+|++|
T Consensus 179 ~~~~-~~~~~~~~~~~~-~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 253 (330)
T PLN02298 179 WPIP-QILTFVARFLPT-LAIVPT-ADLLE--KSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIP 253 (330)
T ss_pred hHHH-HHHHHHHHHCCC-CccccC-CCccc--ccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCC
Confidence 0000 000001110000 000000 00000 000000000000000000000000 111111111 23567889999
Q ss_pred eeeeecCCCCCCCCCCCChhHHhc--CCCeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHHHH
Q 015401 314 LLCIQAQNDPIAPSRGIPCEDIKA--NPNCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEHLE 379 (407)
Q Consensus 314 vlii~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~~~ 379 (407)
+|+|+|++|.+++++.. +.+.+. .+++++++++++||..+++.|+.. ...+.+.|.+||.+..
T Consensus 254 vLii~G~~D~ivp~~~~-~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~--~~~~~~~i~~fl~~~~ 318 (330)
T PLN02298 254 FIVLHGSADVVTDPDVS-RALYEEAKSEDKTIKIYDGMMHSLLFGEPDEN--IEIVRRDILSWLNERC 318 (330)
T ss_pred EEEEecCCCCCCCHHHH-HHHHHHhccCCceEEEcCCcEeeeecCCCHHH--HHHHHHHHHHHHHHhc
Confidence 99999999999998866 444443 358899999999999999988630 1125667888888764
No 11
>PHA02857 monoglyceride lipase; Provisional
Probab=99.95 E-value=9e-27 Score=208.76 Aligned_cols=262 Identities=15% Similarity=0.144 Sum_probs=159.0
Q ss_pred EEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCC-cccC
Q 015401 88 CIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQ-FYSA 166 (407)
Q Consensus 88 ~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~-~~~~ 166 (407)
++...||..+.+.+..+.+ ..+++|+++||+++++. . +..++..+.+.||+|+++|+||||.|+..... ....
T Consensus 4 ~~~~~~g~~l~~~~~~~~~----~~~~~v~llHG~~~~~~-~-~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~ 77 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPIT----YPKALVFISHGAGEHSG-R-YEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFG 77 (276)
T ss_pred eeecCCCCEEEEEeccCCC----CCCEEEEEeCCCccccc-h-HHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHH
Confidence 4566789888886444431 25678888899976553 4 47788888888999999999999999753211 1223
Q ss_pred CChhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchhHHHHHHHHH
Q 015401 167 SFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNIVYDKALAS 246 (407)
Q Consensus 167 ~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~~~~~~~~~ 246 (407)
.+.+|+...++.++..++..+++++||||||.+++.+|.++|+. ++++|++++...... ... ...+..
T Consensus 78 ~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~--i~~lil~~p~~~~~~------~~~----~~~~~~ 145 (276)
T PHA02857 78 VYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNL--FTAMILMSPLVNAEA------VPR----LNLLAA 145 (276)
T ss_pred HHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccc--cceEEEecccccccc------ccH----HHHHHH
Confidence 44567777777766666777899999999999999999999998 999999987643110 000 000010
Q ss_pred HHHHHHHHHHhhhhhcCCCCCHHHHhcCCCHHHHhhccccccC---CCCC--HHHHHh-hCCcchhcCCCccceeeeecC
Q 015401 247 ALCRIFKKHALLFEDMGGEFNIPLAANAKSVRQFDDGLTRVSF---GFKS--VDDYYS-NSSSSDSIKHVRIPLLCIQAQ 320 (407)
Q Consensus 247 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~-~~~~~~~l~~i~~Pvlii~g~ 320 (407)
.+...... ............ .....+.......+.. .... ....+. .......+.++++|+|+++|+
T Consensus 146 ~~~~~~~~-----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~ 218 (276)
T PHA02857 146 KLMGIFYP-----NKIVGKLCPESV--SRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGT 218 (276)
T ss_pred HHHHHhCC-----CCccCCCCHhhc--cCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecC
Confidence 10000000 000000000000 0000000000000000 0000 001111 112235678999999999999
Q ss_pred CCCCCCCCCCChhHHhc-CCCeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHHH
Q 015401 321 NDPIAPSRGIPCEDIKA-NPNCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEHL 378 (407)
Q Consensus 321 ~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~~ 378 (407)
+|.++|++.. +.+.+. .+++++.+++++||..+.|.++. ..-+.+.+.+||+..
T Consensus 219 ~D~i~~~~~~-~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~---~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 219 NNEISDVSGA-YYFMQHANCNREIKIYEGAKHHLHKETDEV---KKSVMKEIETWIFNR 273 (276)
T ss_pred CCCcCChHHH-HHHHHHccCCceEEEeCCCcccccCCchhH---HHHHHHHHHHHHHHh
Confidence 9999998876 344444 35789999999999999987742 001667788888764
No 12
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.95 E-value=5.2e-27 Score=211.10 Aligned_cols=251 Identities=13% Similarity=0.142 Sum_probs=150.9
Q ss_pred EEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHHH--HHHHHHHHhCCcEEEEEeCCCCCCCCCCCCC-cccCCChhHH
Q 015401 96 SVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYV--RHMLLRARSKGWRVVVFNSRGCGDSPVTTPQ-FYSASFLGDM 172 (407)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~--~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~-~~~~~~~~Dl 172 (407)
...+.|...+ ++|+||++||++++.. .|. ...+..+.+.||+|+++|+||||.|+..... .....+++|+
T Consensus 19 ~~~~~y~~~g------~~~~ivllHG~~~~~~-~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l 91 (282)
T TIGR03343 19 NFRIHYNEAG------NGEAVIMLHGGGPGAG-GWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAV 91 (282)
T ss_pred ceeEEEEecC------CCCeEEEECCCCCchh-hHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHH
Confidence 3556665433 4578999999866543 331 2334556678999999999999999754322 1222457888
Q ss_pred HHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHh-cchhHHHHHHHHHHHHHH
Q 015401 173 QEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFR-KGFNIVYDKALASALCRI 251 (407)
Q Consensus 173 ~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~ 251 (407)
.++++.+..+ +++++||||||.+++.+|.++|++ ++++|+++++........... ......+. .+.......
T Consensus 92 ~~~l~~l~~~----~~~lvG~S~Gg~ia~~~a~~~p~~--v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 164 (282)
T TIGR03343 92 KGLMDALDIE----KAHLVGNSMGGATALNFALEYPDR--IGKLILMGPGGLGPSLFAPMPMEGIKLLFK-LYAEPSYET 164 (282)
T ss_pred HHHHHHcCCC----CeeEEEECchHHHHHHHHHhChHh--hceEEEECCCCCCccccccCchHHHHHHHH-HhcCCCHHH
Confidence 8888888766 999999999999999999999999 999999986531100000000 00000000 000000000
Q ss_pred HHHHHhhhhhcCCCCCHHHHh-------c-CCCHHHHhhccccccCCCCCHHHHHhhCCcchhcCCCccceeeeecCCCC
Q 015401 252 FKKHALLFEDMGGEFNIPLAA-------N-AKSVRQFDDGLTRVSFGFKSVDDYYSNSSSSDSIKHVRIPLLCIQAQNDP 323 (407)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~ 323 (407)
..................... . ......+...... .. +...+....+.+|++|+|+++|++|+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~~l~~i~~Pvlli~G~~D~ 235 (282)
T TIGR03343 165 LKQMLNVFLFDQSLITEELLQGRWENIQRQPEHLKNFLISSQK--AP-------LSTWDVTARLGEIKAKTLVTWGRDDR 235 (282)
T ss_pred HHHHHhhCccCcccCcHHHHHhHHHHhhcCHHHHHHHHHhccc--cc-------cccchHHHHHhhCCCCEEEEEccCCC
Confidence 000000000000000000000 0 0000000000000 00 01112234578899999999999999
Q ss_pred CCCCCCCChhHHhcCCCeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHH
Q 015401 324 IAPSRGIPCEDIKANPNCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLE 376 (407)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~ 376 (407)
+++++.. +.+.+..|++++++++++||+.+.|+|+. +++.|.+|++
T Consensus 236 ~v~~~~~-~~~~~~~~~~~~~~i~~agH~~~~e~p~~------~~~~i~~fl~ 281 (282)
T TIGR03343 236 FVPLDHG-LKLLWNMPDAQLHVFSRCGHWAQWEHADA------FNRLVIDFLR 281 (282)
T ss_pred cCCchhH-HHHHHhCCCCEEEEeCCCCcCCcccCHHH------HHHHHHHHhh
Confidence 9998765 57778889999999999999999999998 9999999985
No 13
>PRK10749 lysophospholipase L2; Provisional
Probab=99.95 E-value=1.5e-26 Score=211.85 Aligned_cols=286 Identities=14% Similarity=0.146 Sum_probs=165.6
Q ss_pred hhHHHHHHhhhcCCCCCCccEEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEE
Q 015401 66 CHVETIFAAFFRSLPDVKLKRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRV 145 (407)
Q Consensus 66 ~~~qt~~~~~~~~~~~~~~~r~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~v 145 (407)
...|+....+.. ..+...+...||..+.+....+.+ ++++||++||++++.. .| ..++..+.+.||+|
T Consensus 17 ~~~~~~~~~~~~-----~~~~~~~~~~~g~~l~~~~~~~~~-----~~~~vll~HG~~~~~~-~y-~~~~~~l~~~g~~v 84 (330)
T PRK10749 17 AFTMGPLLDFWR-----QREEAEFTGVDDIPIRFVRFRAPH-----HDRVVVICPGRIESYV-KY-AELAYDLFHLGYDV 84 (330)
T ss_pred HHHHHHHHHHHh-----hccceEEEcCCCCEEEEEEccCCC-----CCcEEEEECCccchHH-HH-HHHHHHHHHCCCeE
Confidence 344555555542 123455666788777665333322 5679999999966442 44 67777788999999
Q ss_pred EEEeCCCCCCCCCCCCC------cccCCChhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEE
Q 015401 146 VVFNSRGCGDSPVTTPQ------FYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSL 219 (407)
Q Consensus 146 i~~D~rG~G~S~~~~~~------~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l 219 (407)
+++|+||||.|+..... .+.+.+++|+.++++.+...++..+++++||||||.+++.+|.++|+. ++++|++
T Consensus 85 ~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~--v~~lvl~ 162 (330)
T PRK10749 85 LIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGV--FDAIALC 162 (330)
T ss_pred EEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCC--cceEEEE
Confidence 99999999999753221 245677889999999886665667999999999999999999999998 9999988
Q ss_pred cCCCCHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhh----hhcCC-CCCHHHHhc-CCCHHHHhhccc-cccC--C
Q 015401 220 CNPFNLVIADQDFRKGFNIVYDKALASALCRIFKKHALLF----EDMGG-EFNIPLAAN-AKSVRQFDDGLT-RVSF--G 290 (407)
Q Consensus 220 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~----~~~~~-~~~~~~~~~-~~~~~~~~~~~~-~~~~--~ 290 (407)
++....... ........+...+... ....... ..... ......... ......+.+.+. .+.. +
T Consensus 163 ~p~~~~~~~-------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 234 (330)
T PRK10749 163 APMFGIVLP-------LPSWMARRILNWAEGH-PRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVG 234 (330)
T ss_pred CchhccCCC-------CCcHHHHHHHHHHHHh-cCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccC
Confidence 765422100 0000000011111000 0000000 00000 000000000 000001111111 1100 0
Q ss_pred CCCH---HHHHhh-CCcchhcCCCccceeeeecCCCCCCCCCCCChhHHhc-------CCCeEEEEcCCCCceeecCCCC
Q 015401 291 FKSV---DDYYSN-SSSSDSIKHVRIPLLCIQAQNDPIAPSRGIPCEDIKA-------NPNCLLILTPKGGHLGWVAGPE 359 (407)
Q Consensus 291 ~~~~---~~~~~~-~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~-------~~~~~~~~~~~~gH~~~~~~p~ 359 (407)
.... .+.+.. ......+.++++|+|+|+|++|++++++.. +.+.+. .+++++++++++||..+.|.+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~vv~~~~~-~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~ 313 (330)
T PRK10749 235 GPTYHWVRESILAGEQVLAGAGDITTPLLLLQAEEERVVDNRMH-DRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDA 313 (330)
T ss_pred CCcHHHHHHHHHHHHHHHhhccCCCCCEEEEEeCCCeeeCHHHH-HHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcH
Confidence 0011 111111 122355788999999999999999998764 333332 2567899999999999988862
Q ss_pred CCCCCCCcHHHHHHHHHH
Q 015401 360 APFGSPWTDPVVMDFLEH 377 (407)
Q Consensus 360 ~~~~~~w~~~~i~~fl~~ 377 (407)
. ..-+.+.|.+||++
T Consensus 314 ~---r~~v~~~i~~fl~~ 328 (330)
T PRK10749 314 M---RSVALNAIVDFFNR 328 (330)
T ss_pred H---HHHHHHHHHHHHhh
Confidence 1 00056777888865
No 14
>PLN02578 hydrolase
Probab=99.94 E-value=1.4e-26 Score=213.96 Aligned_cols=243 Identities=16% Similarity=0.200 Sum_probs=149.3
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEE
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAV 191 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lv 191 (407)
++|+||++||++++.. .| ...+..+ .++|+|+++|+||||.|+.+...++...+++|+.++++.+..+ +++++
T Consensus 85 ~g~~vvliHG~~~~~~-~w-~~~~~~l-~~~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~~~~~----~~~lv 157 (354)
T PLN02578 85 EGLPIVLIHGFGASAF-HW-RYNIPEL-AKKYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKEVVKE----PAVLV 157 (354)
T ss_pred CCCeEEEECCCCCCHH-HH-HHHHHHH-hcCCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHHhccC----CeEEE
Confidence 4578999999977543 33 4555554 5679999999999999987665666777788999999888765 89999
Q ss_pred EechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHh-------cchhHHHHHHHHHHHHHHHH-------HHHh
Q 015401 192 GWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFR-------KGFNIVYDKALASALCRIFK-------KHAL 257 (407)
Q Consensus 192 G~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~~~~-------~~~~ 257 (407)
|||+||.+++.+|.++|++ |+++|+++++........... ..........+...+..... ....
T Consensus 158 G~S~Gg~ia~~~A~~~p~~--v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (354)
T PLN02578 158 GNSLGGFTALSTAVGYPEL--VAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLFWQAKQPS 235 (354)
T ss_pred EECHHHHHHHHHHHhChHh--cceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhcCHH
Confidence 9999999999999999999 999999976432111100000 00000000000000000000 0000
Q ss_pred hhhhc-CCCCCHHHHhcCCCHHHH-hhccccccCCCCCHHHHHh----------hCCcchhcCCCccceeeeecCCCCCC
Q 015401 258 LFEDM-GGEFNIPLAANAKSVRQF-DDGLTRVSFGFKSVDDYYS----------NSSSSDSIKHVRIPLLCIQAQNDPIA 325 (407)
Q Consensus 258 ~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~i~~Pvlii~g~~D~~~ 325 (407)
..... ...+ .....+.++ .+.+............++. ..+..+.++++++|+++|+|++|+++
T Consensus 236 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~v 310 (354)
T PLN02578 236 RIESVLKSVY-----KDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWGDLDPWV 310 (354)
T ss_pred HHHHHHHHhc-----CCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEEeCCCCCC
Confidence 00000 0000 000000000 0000000000011111110 12234567899999999999999999
Q ss_pred CCCCCChhHHhcCCCeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHH
Q 015401 326 PSRGIPCEDIKANPNCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLE 376 (407)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~ 376 (407)
+.+.. +.+.+..|+.+++++ ++||+++.|.|++ +++.|.+|++
T Consensus 311 ~~~~~-~~l~~~~p~a~l~~i-~~GH~~~~e~p~~------~~~~I~~fl~ 353 (354)
T PLN02578 311 GPAKA-EKIKAFYPDTTLVNL-QAGHCPHDEVPEQ------VNKALLEWLS 353 (354)
T ss_pred CHHHH-HHHHHhCCCCEEEEe-CCCCCccccCHHH------HHHHHHHHHh
Confidence 88765 567778899999999 5999999999998 9999999985
No 15
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.94 E-value=9.5e-27 Score=218.22 Aligned_cols=246 Identities=12% Similarity=0.186 Sum_probs=143.0
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHH---hCCcEEEEEeCCCCCCCCCCCC-CcccCCChhHHH-HHHHHHHhhCCCC
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRAR---SKGWRVVVFNSRGCGDSPVTTP-QFYSASFLGDMQ-EVVAHVGSKYPKA 186 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~---~~g~~vi~~D~rG~G~S~~~~~-~~~~~~~~~Dl~-~~l~~l~~~~~~~ 186 (407)
.+|+|||+||++++.. .|...+...+. +++|+|+++|+||||.|+.+.. .++.+.+++|+. .+++.++..
T Consensus 200 ~k~~VVLlHG~~~s~~-~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~a~~l~~~ll~~lg~~---- 274 (481)
T PLN03087 200 AKEDVLFIHGFISSSA-FWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLREHLEMIERSVLERYKVK---- 274 (481)
T ss_pred CCCeEEEECCCCccHH-HHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHHHHHHHHHHHHHHcCCC----
Confidence 4689999999977553 44323333333 4799999999999999976532 245556666663 566665544
Q ss_pred cEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHH----HHhcch--hHHHHH-HHHHHHHHHHH---HH-
Q 015401 187 HLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQ----DFRKGF--NIVYDK-ALASALCRIFK---KH- 255 (407)
Q Consensus 187 ~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~----~~~~~~--~~~~~~-~~~~~l~~~~~---~~- 255 (407)
+++++||||||.+++.+|.++|++ |+++|+++++........ ...... ...+.. .+......++. ..
T Consensus 275 k~~LVGhSmGG~iAl~~A~~~Pe~--V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 352 (481)
T PLN03087 275 SFHIVAHSLGCILALALAVKHPGA--VKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRVWPPIAFGASVACWYEHISRTI 352 (481)
T ss_pred CEEEEEECHHHHHHHHHHHhChHh--ccEEEEECCCccccccchhHHHHHHHHhcccccCCccccchhHHHHHHHHHhhh
Confidence 999999999999999999999999 999999987653211100 000000 000000 00000000000 00
Q ss_pred -------HhhhhhcCCCCCHHHHhcCCCHHHHh-hccccc--cCCCCCHHHHHh------hCCcchhcCCCccceeeeec
Q 015401 256 -------ALLFEDMGGEFNIPLAANAKSVRQFD-DGLTRV--SFGFKSVDDYYS------NSSSSDSIKHVRIPLLCIQA 319 (407)
Q Consensus 256 -------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~------~~~~~~~l~~i~~Pvlii~g 319 (407)
...+.... .......+..+. ..+... ...+.....+.. .........+|++|+|+|+|
T Consensus 353 ~~~~~~~~~~~~~~~------~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~l~~~I~vPtLII~G 426 (481)
T PLN03087 353 CLVICKNHRLWEFLT------RLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDHVRDQLKCDVAIFHG 426 (481)
T ss_pred hcccccchHHHHHHH------HHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHHHHHhCCCCEEEEEE
Confidence 00000000 000000000000 000000 000000000000 00011233478999999999
Q ss_pred CCCCCCCCCCCChhHHhcCCCeEEEEcCCCCceeec-CCCCCCCCCCCcHHHHHHHHHH
Q 015401 320 QNDPIAPSRGIPCEDIKANPNCLLILTPKGGHLGWV-AGPEAPFGSPWTDPVVMDFLEH 377 (407)
Q Consensus 320 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~p~~~~~~~w~~~~i~~fl~~ 377 (407)
++|.++|++.. +.+.+..|++++++++++||++++ ++|+. +++.|.+|++.
T Consensus 427 e~D~ivP~~~~-~~la~~iP~a~l~vI~~aGH~~~v~e~p~~------fa~~L~~F~~~ 478 (481)
T PLN03087 427 GDDELIPVECS-YAVKAKVPRARVKVIDDKDHITIVVGRQKE------FARELEEIWRR 478 (481)
T ss_pred CCCCCCCHHHH-HHHHHhCCCCEEEEeCCCCCcchhhcCHHH------HHHHHHHHhhc
Confidence 99999998876 577888999999999999999886 89988 99999999864
No 16
>PLN02965 Probable pheophorbidase
Probab=99.94 E-value=2.9e-27 Score=209.14 Aligned_cols=234 Identities=11% Similarity=0.157 Sum_probs=148.2
Q ss_pred EEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCC-CcccCCChhHHHHHHHHHHhhCCCCcEEEEEe
Q 015401 115 VLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTP-QFYSASFLGDMQEVVAHVGSKYPKAHLYAVGW 193 (407)
Q Consensus 115 ~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~-~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~ 193 (407)
.|||+||++++.. .| ..++..|.+.||+|+++|+||||.|+.+.. .++.+.+++|+.++++.+... .+++++||
T Consensus 5 ~vvllHG~~~~~~-~w-~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~---~~~~lvGh 79 (255)
T PLN02965 5 HFVFVHGASHGAW-CW-YKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPD---HKVILVGH 79 (255)
T ss_pred EEEEECCCCCCcC-cH-HHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCC---CCEEEEec
Confidence 4999999977654 44 567777778899999999999999975433 455677888999999887531 38999999
Q ss_pred chhHHHHHHHHhccCCCCCceeEEEEcCCCCHHH--HHHHHh---cchhHHHHHHHHHHHHHHHHHHHhhhhhcCC--CC
Q 015401 194 SLGANILIRYLGHESHSCPLSGAVSLCNPFNLVI--ADQDFR---KGFNIVYDKALASALCRIFKKHALLFEDMGG--EF 266 (407)
Q Consensus 194 S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~--~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~ 266 (407)
||||.+++.++.++|++ |+++|++++...... ....+. ......+...+ .. ....... ..
T Consensus 80 SmGG~ia~~~a~~~p~~--v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~---~~~~~~~~~~~ 146 (255)
T PLN02965 80 SIGGGSVTEALCKFTDK--ISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTF--------GE---GPDKPPTGIMM 146 (255)
T ss_pred CcchHHHHHHHHhCchh--eeEEEEEccccCCCCCCccHHHHhhhhccccceeeee--------cc---CCCCCcchhhc
Confidence 99999999999999999 999999987421000 000000 00000000000 00 0000000 00
Q ss_pred CHHH----HhcCCCHHHHh---hccccccCCCCCHHHHHhhCCcchhcCCCccceeeeecCCCCCCCCCCCChhHHhcCC
Q 015401 267 NIPL----AANAKSVRQFD---DGLTRVSFGFKSVDDYYSNSSSSDSIKHVRIPLLCIQAQNDPIAPSRGIPCEDIKANP 339 (407)
Q Consensus 267 ~~~~----~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~ 339 (407)
.... ........... ..+... ........ .+....+..+++|+++|+|++|.+++++.. +.+.+..+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~-~~~~~~~~ 220 (255)
T PLN02965 147 KPEFVRHYYYNQSPLEDYTLSSKLLRPA--PVRAFQDL---DKLPPNPEAEKVPRVYIKTAKDNLFDPVRQ-DVMVENWP 220 (255)
T ss_pred CHHHHHHHHhcCCCHHHHHHHHHhcCCC--CCcchhhh---hhccchhhcCCCCEEEEEcCCCCCCCHHHH-HHHHHhCC
Confidence 0000 00000000000 000000 00000000 111234567899999999999999998755 68888999
Q ss_pred CeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHHH
Q 015401 340 NCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEHL 378 (407)
Q Consensus 340 ~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~~ 378 (407)
++++++++++||++++|+|++ +++.|.+|++.+
T Consensus 221 ~a~~~~i~~~GH~~~~e~p~~------v~~~l~~~~~~~ 253 (255)
T PLN02965 221 PAQTYVLEDSDHSAFFSVPTT------LFQYLLQAVSSL 253 (255)
T ss_pred cceEEEecCCCCchhhcCHHH------HHHHHHHHHHHh
Confidence 999999999999999999999 999999998765
No 17
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.94 E-value=3.5e-26 Score=211.63 Aligned_cols=242 Identities=17% Similarity=0.204 Sum_probs=148.0
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCC-CCcccCCChhHHHHHHHHHHhhCCCCcEEE
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTT-PQFYSASFLGDMQEVVAHVGSKYPKAHLYA 190 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~-~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~l 190 (407)
.+|+|||+||++++.. .| ..++..+ ..+|+|+++|+||||.|+.+. ..++.+.+++|+.++++.+... ++++
T Consensus 87 ~gp~lvllHG~~~~~~-~w-~~~~~~L-~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l~~~----~~~l 159 (360)
T PLN02679 87 SGPPVLLVHGFGASIP-HW-RRNIGVL-AKNYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEVVQK----PTVL 159 (360)
T ss_pred CCCeEEEECCCCCCHH-HH-HHHHHHH-hcCCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHhcCC----CeEE
Confidence 4589999999977554 44 5555555 558999999999999997653 2456678888999999887765 9999
Q ss_pred EEechhHHHHHHHHh-ccCCCCCceeEEEEcCCCCHHHHH--HHHh----cchhHHHHHH-----HHHHHHHHHH---HH
Q 015401 191 VGWSLGANILIRYLG-HESHSCPLSGAVSLCNPFNLVIAD--QDFR----KGFNIVYDKA-----LASALCRIFK---KH 255 (407)
Q Consensus 191 vG~S~Gg~ia~~~a~-~~p~~~~v~~~v~l~~p~~~~~~~--~~~~----~~~~~~~~~~-----~~~~l~~~~~---~~ 255 (407)
+||||||.+++.++. .+|++ |+++|+++++....... ..+. ......+... ....+..... ..
T Consensus 160 vGhS~Gg~ia~~~a~~~~P~r--V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (360)
T PLN02679 160 IGNSVGSLACVIAASESTRDL--VRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRDNL 237 (360)
T ss_pred EEECHHHHHHHHHHHhcChhh--cCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHHHH
Confidence 999999999998887 47898 99999998753211000 0000 0000000000 0000000000 00
Q ss_pred Hhhhhhc---CCCCCHHHHhcCCCHHHHhhccccccCCCCCHHH---HHh---hCCcchhcCCCccceeeeecCCCCCCC
Q 015401 256 ALLFEDM---GGEFNIPLAANAKSVRQFDDGLTRVSFGFKSVDD---YYS---NSSSSDSIKHVRIPLLCIQAQNDPIAP 326 (407)
Q Consensus 256 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~l~~i~~Pvlii~g~~D~~~~ 326 (407)
...+... ...... ++.+.+............ ++. ..+....+.+|++|+|+|+|++|+++|
T Consensus 238 ~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~D~~~p 307 (360)
T PLN02679 238 KNILLSVYGNKEAVDD----------ELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLWGDQDPFTP 307 (360)
T ss_pred HHHHHHhccCcccCCH----------HHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeCCCCCcC
Confidence 0000000 000000 000000000000000111 111 112235678899999999999999998
Q ss_pred CCCC----ChhHHhcCCCeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHHH
Q 015401 327 SRGI----PCEDIKANPNCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEHL 378 (407)
Q Consensus 327 ~~~~----~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~~ 378 (407)
++.. .+.+.+..|++++++++++||++++|+|++ +++.|.+||++.
T Consensus 308 ~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~------~~~~I~~FL~~~ 357 (360)
T PLN02679 308 LDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRPDL------VHEKLLPWLAQL 357 (360)
T ss_pred chhhHHHHHHhhhccCCceEEEEcCCCCCCccccCHHH------HHHHHHHHHHhc
Confidence 7631 123456689999999999999999999998 999999999764
No 18
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.94 E-value=1.6e-26 Score=199.17 Aligned_cols=262 Identities=22% Similarity=0.346 Sum_probs=172.6
Q ss_pred EEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCC--CcccCCChhHHHH
Q 015401 97 VALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTP--QFYSASFLGDMQE 174 (407)
Q Consensus 97 ~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~--~~~~~~~~~Dl~~ 174 (407)
+.+.+.... ++++|+|+++||+..... +| +.....+..+||+|+++|+||+|.|+.+.. .+++...+.|+..
T Consensus 32 I~~h~~e~g----~~~gP~illlHGfPe~wy-sw-r~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~ 105 (322)
T KOG4178|consen 32 IRLHYVEGG----PGDGPIVLLLHGFPESWY-SW-RHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVA 105 (322)
T ss_pred EEEEEEeec----CCCCCEEEEEccCCccch-hh-hhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHH
Confidence 666665543 358999999999987655 44 667778888999999999999999987654 4777888999999
Q ss_pred HHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHH--HHHHHhcchhH-----------HHH
Q 015401 175 VVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVI--ADQDFRKGFNI-----------VYD 241 (407)
Q Consensus 175 ~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~--~~~~~~~~~~~-----------~~~ 241 (407)
+++++..+ +++++||+|||++|..+|..+|++ |+++|+++.+..... ........+.. ...
T Consensus 106 lld~Lg~~----k~~lvgHDwGaivaw~la~~~Per--v~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E 179 (322)
T KOG4178|consen 106 LLDHLGLK----KAFLVGHDWGAIVAWRLALFYPER--VDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKPE 179 (322)
T ss_pred HHHHhccc----eeEEEeccchhHHHHHHHHhChhh--cceEEEecCCCCCcccchhhhhccccCccceeEeccccCcch
Confidence 99999976 999999999999999999999999 999999988764100 00000000000 001
Q ss_pred HHHH----HHHHHHHHHHHhhhhhc-CCCCCH-HHHhcCCCHHHHhhccccccCCCCCHHHHHhhCCc-----chhcCCC
Q 015401 242 KALA----SALCRIFKKHALLFEDM-GGEFNI-PLAANAKSVRQFDDGLTRVSFGFKSVDDYYSNSSS-----SDSIKHV 310 (407)
Q Consensus 242 ~~~~----~~l~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~l~~i 310 (407)
..+. ..+...+.......... ....+. +.....+.++-+...+. .-++.....||++... ...+.+|
T Consensus 180 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~--~~g~~gplNyyrn~~r~w~a~~~~~~~i 257 (322)
T KOG4178|consen 180 TELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQ--IDGFTGPLNYYRNFRRNWEAAPWALAKI 257 (322)
T ss_pred hhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccc--cccccccchhhHHHhhCchhcccccccc
Confidence 1111 11111111000000000 000000 11112222333333331 1235555566654432 3457889
Q ss_pred ccceeeeecCCCCCCCCCCCChhHHhcCCCe-EEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHHH
Q 015401 311 RIPLLCIQAQNDPIAPSRGIPCEDIKANPNC-LLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEHL 378 (407)
Q Consensus 311 ~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~~ 378 (407)
++|+++|+|..|++.+.........+..|+. +.++++++||+...|+|++ +++.+.+|+++.
T Consensus 258 ~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~------v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 258 TIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQE------VNQAILGFINSF 320 (322)
T ss_pred ccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHH------HHHHHHHHHHhh
Confidence 9999999999999988763324555566665 7888999999999999999 999999999875
No 19
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.94 E-value=2.6e-26 Score=206.08 Aligned_cols=240 Identities=17% Similarity=0.232 Sum_probs=147.7
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCC-CcccCCChhHHHHHHHHHHhhCCCCcEEE
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTP-QFYSASFLGDMQEVVAHVGSKYPKAHLYA 190 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~-~~~~~~~~~Dl~~~l~~l~~~~~~~~v~l 190 (407)
++|+||++||++++.. .| ..++..+ +++|+|+++|+||||.|+.+.. .++.+.+++|+.++++.+..+ ++++
T Consensus 27 ~~~~vv~~hG~~~~~~-~~-~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~~~~~----~~~l 99 (278)
T TIGR03056 27 AGPLLLLLHGTGASTH-SW-RDLMPPL-ARSFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAAEGLS----PDGV 99 (278)
T ss_pred CCCeEEEEcCCCCCHH-HH-HHHHHHH-hhCcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHHcCCC----CceE
Confidence 4689999999977554 44 4555555 5679999999999999976544 466677788888888776544 8999
Q ss_pred EEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchhHHHHHHHHHHH-HHHHHH-------HHhhhhhc
Q 015401 191 VGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNIVYDKALASAL-CRIFKK-------HALLFEDM 262 (407)
Q Consensus 191 vG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~-------~~~~~~~~ 262 (407)
+||||||.+++.+|.++|++ ++++|++++.+......... .............+ ...... ........
T Consensus 100 vG~S~Gg~~a~~~a~~~p~~--v~~~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (278)
T TIGR03056 100 IGHSAGAAIALRLALDGPVT--PRMVVGINAALMPFEGMAGT--LFPYMARVLACNPFTPPMMSRGAADQQRVERLIRDT 175 (278)
T ss_pred EEECccHHHHHHHHHhCCcc--cceEEEEcCccccccccccc--ccchhhHhhhhcccchHHHHhhcccCcchhHHhhcc
Confidence 99999999999999999998 99999988754311100000 00000000000000 000000 00000000
Q ss_pred CCCCCHHHHhcCCCHHHHhhccccccCCCCCHHHHHhh---CCcchhcCCCccceeeeecCCCCCCCCCCCChhHHhcCC
Q 015401 263 GGEFNIPLAANAKSVRQFDDGLTRVSFGFKSVDDYYSN---SSSSDSIKHVRIPLLCIQAQNDPIAPSRGIPCEDIKANP 339 (407)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~ 339 (407)
.... .......+....... .......++... ......+++|++|+++|+|++|.+++++.. +.+.+..+
T Consensus 176 ~~~~------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~~-~~~~~~~~ 247 (278)
T TIGR03056 176 GSLL------DKAGMTYYGRLIRSP-AHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPPDES-KRAATRVP 247 (278)
T ss_pred cccc------ccchhhHHHHhhcCc-hhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCHHHH-HHHHHhcc
Confidence 0000 000001111100000 000001111111 112345788999999999999999998765 56777889
Q ss_pred CeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHH
Q 015401 340 NCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLE 376 (407)
Q Consensus 340 ~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~ 376 (407)
+++++.++++||+.+++.|++ +++.|.+|++
T Consensus 248 ~~~~~~~~~~gH~~~~e~p~~------~~~~i~~f~~ 278 (278)
T TIGR03056 248 TATLHVVPGGGHLVHEEQADG------VVGLILQAAE 278 (278)
T ss_pred CCeEEEECCCCCcccccCHHH------HHHHHHHHhC
Confidence 999999999999999999988 9999999974
No 20
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.94 E-value=3.3e-26 Score=202.74 Aligned_cols=235 Identities=16% Similarity=0.188 Sum_probs=138.2
Q ss_pred CcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEEE
Q 015401 113 SPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVG 192 (407)
Q Consensus 113 ~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG 192 (407)
.|+|||+||+++++. .| ..++..| .++|+|+++|+||||.|+... .++. +++.+.+..+. ..+++++|
T Consensus 13 ~~~ivllHG~~~~~~-~w-~~~~~~L-~~~~~vi~~Dl~G~G~S~~~~-~~~~----~~~~~~l~~~~----~~~~~lvG 80 (256)
T PRK10349 13 NVHLVLLHGWGLNAE-VW-RCIDEEL-SSHFTLHLVDLPGFGRSRGFG-ALSL----ADMAEAVLQQA----PDKAIWLG 80 (256)
T ss_pred CCeEEEECCCCCChh-HH-HHHHHHH-hcCCEEEEecCCCCCCCCCCC-CCCH----HHHHHHHHhcC----CCCeEEEE
Confidence 357999999876554 44 5566555 556999999999999997432 2222 22222222222 34899999
Q ss_pred echhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchhHHHHH---HHHHHHHHHHHHHHhhhhhcCCCCCHH
Q 015401 193 WSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNIVYDK---ALASALCRIFKKHALLFEDMGGEFNIP 269 (407)
Q Consensus 193 ~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~ 269 (407)
|||||.+++.+|.++|++ |+++|+++++...... ..+.......... .+.............. ...... ...
T Consensus 81 hS~Gg~ia~~~a~~~p~~--v~~lili~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~ 155 (256)
T PRK10349 81 WSLGGLVASQIALTHPER--VQALVTVASSPCFSAR-DEWPGIKPDVLAGFQQQLSDDFQRTVERFLAL-QTMGTE-TAR 155 (256)
T ss_pred ECHHHHHHHHHHHhChHh--hheEEEecCccceecC-CCCCcccHHHHHHHHHHHHhchHHHHHHHHHH-HHccCc-hHH
Confidence 999999999999999999 9999999764221100 0000000000000 0000000000000000 000000 000
Q ss_pred HHhcCCCHHHHhhcccc-ccCCC---CCHHHHHhhCCcchhcCCCccceeeeecCCCCCCCCCCCChhHHhcCCCeEEEE
Q 015401 270 LAANAKSVRQFDDGLTR-VSFGF---KSVDDYYSNSSSSDSIKHVRIPLLCIQAQNDPIAPSRGIPCEDIKANPNCLLIL 345 (407)
Q Consensus 270 ~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 345 (407)
. ....+...+.. ..... ......+...+....+.++++|+|+|+|++|.+++.+.. +.+.+..+++++++
T Consensus 156 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~-~~~~~~i~~~~~~~ 229 (256)
T PRK10349 156 Q-----DARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVV-PMLDKLWPHSESYI 229 (256)
T ss_pred H-----HHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHH-HHHHHhCCCCeEEE
Confidence 0 00011110000 00000 001122334455677899999999999999999987755 57777889999999
Q ss_pred cCCCCceeecCCCCCCCCCCCcHHHHHHHHH
Q 015401 346 TPKGGHLGWVAGPEAPFGSPWTDPVVMDFLE 376 (407)
Q Consensus 346 ~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~ 376 (407)
++++||++++|+|+. |++.+.+|-+
T Consensus 230 i~~~gH~~~~e~p~~------f~~~l~~~~~ 254 (256)
T PRK10349 230 FAKAAHAPFISHPAE------FCHLLVALKQ 254 (256)
T ss_pred eCCCCCCccccCHHH------HHHHHHHHhc
Confidence 999999999999998 8999988854
No 21
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.94 E-value=7.1e-26 Score=200.60 Aligned_cols=237 Identities=16% Similarity=0.244 Sum_probs=150.4
Q ss_pred CCCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEE
Q 015401 110 PPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLY 189 (407)
Q Consensus 110 ~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~ 189 (407)
+.++|+||++||++++.. .| ..++..+ .++|+|+++|+||||.|... ..++.+++++|+.++++++... +++
T Consensus 13 ~~~~~~iv~lhG~~~~~~-~~-~~~~~~l-~~~~~vi~~D~~G~G~s~~~-~~~~~~~~~~d~~~~l~~l~~~----~~~ 84 (255)
T PRK10673 13 PHNNSPIVLVHGLFGSLD-NL-GVLARDL-VNDHDIIQVDMRNHGLSPRD-PVMNYPAMAQDLLDTLDALQIE----KAT 84 (255)
T ss_pred CCCCCCEEEECCCCCchh-HH-HHHHHHH-hhCCeEEEECCCCCCCCCCC-CCCCHHHHHHHHHHHHHHcCCC----ceE
Confidence 347899999999977654 44 4555555 56899999999999999753 3467778899999999988655 899
Q ss_pred EEEechhHHHHHHHHhccCCCCCceeEEEEcCC-CCHHHH-HHHHhcchhHHHHHHHHHHHHHHHHHHHhhhhhcCCCCC
Q 015401 190 AVGWSLGANILIRYLGHESHSCPLSGAVSLCNP-FNLVIA-DQDFRKGFNIVYDKALASALCRIFKKHALLFEDMGGEFN 267 (407)
Q Consensus 190 lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p-~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 267 (407)
++||||||.+++.+|.++|++ |+++|+++.. ...... ............. ...... .......... ..
T Consensus 85 lvGhS~Gg~va~~~a~~~~~~--v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~---~~ 154 (255)
T PRK10673 85 FIGHSMGGKAVMALTALAPDR--IDKLVAIDIAPVDYHVRRHDEIFAAINAVSE----AGATTR-QQAAAIMRQH---LN 154 (255)
T ss_pred EEEECHHHHHHHHHHHhCHhh--cceEEEEecCCCCccchhhHHHHHHHHHhhh----cccccH-HHHHHHHHHh---cC
Confidence 999999999999999999998 9999998643 221000 0000000000000 000000 0000000000 00
Q ss_pred HHHHhcCCCHHHHh-hccccccCCCC--CHHHHHhhCCcchhcCCCccceeeeecCCCCCCCCCCCChhHHhcCCCeEEE
Q 015401 268 IPLAANAKSVRQFD-DGLTRVSFGFK--SVDDYYSNSSSSDSIKHVRIPLLCIQAQNDPIAPSRGIPCEDIKANPNCLLI 344 (407)
Q Consensus 268 ~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~ 344 (407)
......+. ..+....+.+. .....+........++.+++|+|+|+|++|++++.+.. +.+.+..+++++.
T Consensus 155 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~-~~~~~~~~~~~~~ 227 (255)
T PRK10673 155 ------EEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYR-DDLLAQFPQARAH 227 (255)
T ss_pred ------CHHHHHHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHH-HHHHHhCCCcEEE
Confidence 00000000 00000000000 01112222223345678899999999999999987755 5677888999999
Q ss_pred EcCCCCceeecCCCCCCCCCCCcHHHHHHHHHH
Q 015401 345 LTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEH 377 (407)
Q Consensus 345 ~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~ 377 (407)
+++++||..+++.|+. +.+.|.+||+.
T Consensus 228 ~~~~~gH~~~~~~p~~------~~~~l~~fl~~ 254 (255)
T PRK10673 228 VIAGAGHWVHAEKPDA------VLRAIRRYLND 254 (255)
T ss_pred EeCCCCCeeeccCHHH------HHHHHHHHHhc
Confidence 9999999999999988 99999999864
No 22
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.94 E-value=2.5e-25 Score=200.27 Aligned_cols=262 Identities=16% Similarity=0.245 Sum_probs=150.7
Q ss_pred CCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCC---CcccCCC
Q 015401 92 KDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTP---QFYSASF 168 (407)
Q Consensus 92 ~dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~---~~~~~~~ 168 (407)
.+|+.+.+....+. ..+++||++||+.|++. .|+..+...+.+.||+|+++|+||+|.|..+.. .++.+.+
T Consensus 9 ~~~~~~~~~~~~~~-----~~~~~vl~~hG~~g~~~-~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~ 82 (288)
T TIGR01250 9 VDGGYHLFTKTGGE-----GEKIKLLLLHGGPGMSH-EYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYF 82 (288)
T ss_pred CCCCeEEEEeccCC-----CCCCeEEEEcCCCCccH-HHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHH
Confidence 44555554433222 24688999999877665 444444444444599999999999999975422 2455677
Q ss_pred hhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchhHHHHHHHHHHH
Q 015401 169 LGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNIVYDKALASAL 248 (407)
Q Consensus 169 ~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~l 248 (407)
++|+.++++.+..+ +++++||||||.+++.+|.++|++ +.++|++++............... ..+.......+
T Consensus 83 ~~~~~~~~~~~~~~----~~~liG~S~Gg~ia~~~a~~~p~~--v~~lvl~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 155 (288)
T TIGR01250 83 VDELEEVREKLGLD----KFYLLGHSWGGMLAQEYALKYGQH--LKGLIISSMLDSAPEYVKELNRLR-KELPPEVRAAI 155 (288)
T ss_pred HHHHHHHHHHcCCC----cEEEEEeehHHHHHHHHHHhCccc--cceeeEecccccchHHHHHHHHHH-hhcChhHHHHH
Confidence 78888887777654 899999999999999999999998 999998876433221111100000 00000000000
Q ss_pred HHHH----------HH-HHhhhh-hc-CCCCCHHHHh--cCCCHHHHhhccccccCCCCCHHHHHhhCCcchhcCCCccc
Q 015401 249 CRIF----------KK-HALLFE-DM-GGEFNIPLAA--NAKSVRQFDDGLTRVSFGFKSVDDYYSNSSSSDSIKHVRIP 313 (407)
Q Consensus 249 ~~~~----------~~-~~~~~~-~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 313 (407)
.... .. ...... .. .......... .......+...+.... .+. ....+...+....+.++++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~l~~i~~P 233 (288)
T TIGR01250 156 KRCEASGDYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPN-EFT-ITGNLKDWDITDKLSEIKVP 233 (288)
T ss_pred HHHHhccCcchHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCc-ccc-ccccccccCHHHHhhccCCC
Confidence 0000 00 000000 00 0000000000 0000000000000000 000 00011222334567889999
Q ss_pred eeeeecCCCCCCCCCCCChhHHhcCCCeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHH
Q 015401 314 LLCIQAQNDPIAPSRGIPCEDIKANPNCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLE 376 (407)
Q Consensus 314 vlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~ 376 (407)
+++++|++|.+ +++.. +.+.+..++.++++++++||+.++++|++ +.+.|.+|++
T Consensus 234 ~lii~G~~D~~-~~~~~-~~~~~~~~~~~~~~~~~~gH~~~~e~p~~------~~~~i~~fl~ 288 (288)
T TIGR01250 234 TLLTVGEFDTM-TPEAA-REMQELIAGSRLVVFPDGSHMTMIEDPEV------YFKLLSDFIR 288 (288)
T ss_pred EEEEecCCCcc-CHHHH-HHHHHhccCCeEEEeCCCCCCcccCCHHH------HHHHHHHHhC
Confidence 99999999985 44444 56677789999999999999999999998 9999999974
No 23
>PRK06489 hypothetical protein; Provisional
Probab=99.94 E-value=6.2e-26 Score=210.39 Aligned_cols=244 Identities=15% Similarity=0.218 Sum_probs=141.3
Q ss_pred CcEEEEeCCCCCCCccHHH-HHHHHHH-------HhCCcEEEEEeCCCCCCCCCCCC-------CcccCCChhHHHHHH-
Q 015401 113 SPVLILMPGLTGGSEDSYV-RHMLLRA-------RSKGWRVVVFNSRGCGDSPVTTP-------QFYSASFLGDMQEVV- 176 (407)
Q Consensus 113 ~p~vv~lHG~~g~~~~~~~-~~~~~~l-------~~~g~~vi~~D~rG~G~S~~~~~-------~~~~~~~~~Dl~~~l- 176 (407)
+|+|||+||++++.. .|. ..+...+ ..++|+||++|+||||.|+.+.. .++.+.+++|+.+++
T Consensus 69 gpplvllHG~~~~~~-~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~ 147 (360)
T PRK06489 69 DNAVLVLHGTGGSGK-SFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVT 147 (360)
T ss_pred CCeEEEeCCCCCchh-hhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHH
Confidence 689999999987654 332 1333222 36789999999999999975432 234445555555533
Q ss_pred HHHHhhCCCCcEE-EEEechhHHHHHHHHhccCCCCCceeEEEEcCCCC-HHHHHHHHhcchhHHHH-------------
Q 015401 177 AHVGSKYPKAHLY-AVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFN-LVIADQDFRKGFNIVYD------------- 241 (407)
Q Consensus 177 ~~l~~~~~~~~v~-lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~-~~~~~~~~~~~~~~~~~------------- 241 (407)
+++... +++ ++||||||++++.+|.++|++ |+++|++++... .................
T Consensus 148 ~~lgi~----~~~~lvG~SmGG~vAl~~A~~~P~~--V~~LVLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (360)
T PRK06489 148 EGLGVK----HLRLILGTSMGGMHAWMWGEKYPDF--MDALMPMASQPTEMSGRNWMWRRMLIESIRNDPAWNNGNYTTQ 221 (360)
T ss_pred HhcCCC----ceeEEEEECHHHHHHHHHHHhCchh--hheeeeeccCcccccHHHHHHHHHHHHHHHhCCCCCCCCCCCC
Confidence 555544 775 899999999999999999999 999999976421 10000000000000000
Q ss_pred -HHHHHHHHH--HHHHH-HhhhhhcCCCCCHHHHhcCCCHHHHhhccccccCCCCCHHHHH------hhCCcchhcCCCc
Q 015401 242 -KALASALCR--IFKKH-ALLFEDMGGEFNIPLAANAKSVRQFDDGLTRVSFGFKSVDDYY------SNSSSSDSIKHVR 311 (407)
Q Consensus 242 -~~~~~~l~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~i~ 311 (407)
..+...... ..... ...+.... ...... ...+...+.... ......+. ...+..+.+.+|+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~~L~~I~ 292 (360)
T PRK06489 222 PPSLKRANPMFAIATSGGTLAYQAQA--PTRAAA-----DKLVDERLAAPV--TADANDFLYQWDSSRDYNPSPDLEKIK 292 (360)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHhc--CChHHH-----HHHHHHHHHhhh--hcCHHHHHHHHHHhhccChHHHHHhCC
Confidence 000000000 00000 00000000 000000 000000000000 00111111 1223456788999
Q ss_pred cceeeeecCCCCCCCCCCC-ChhHHhcCCCeEEEEcCCC----CceeecCCCCCCCCCCCcHHHHHHHHHHHH
Q 015401 312 IPLLCIQAQNDPIAPSRGI-PCEDIKANPNCLLILTPKG----GHLGWVAGPEAPFGSPWTDPVVMDFLEHLE 379 (407)
Q Consensus 312 ~Pvlii~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~----gH~~~~~~p~~~~~~~w~~~~i~~fl~~~~ 379 (407)
+|+|+|+|++|.++|++.. .+.+.+..|+.++++++++ ||..+ ++|+. +++.|.+||+++.
T Consensus 293 ~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~~-e~P~~------~~~~i~~FL~~~~ 358 (360)
T PRK06489 293 APVLAINSADDERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGTT-GSAKF------WKAYLAEFLAQVP 358 (360)
T ss_pred CCEEEEecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCCCCCcccc-cCHHH------HHHHHHHHHHhcc
Confidence 9999999999999988753 1467788999999999986 99986 89988 9999999998653
No 24
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.93 E-value=7.4e-26 Score=201.88 Aligned_cols=273 Identities=16% Similarity=0.199 Sum_probs=168.8
Q ss_pred CccEEEEEcCCCCEEEEE-eecCCCCCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCC-CCC
Q 015401 83 KLKRECIRTKDDGSVALD-WISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSP-VTT 160 (407)
Q Consensus 83 ~~~r~~~~~~dg~~~~~~-~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~-~~~ 160 (407)
...+..+...||..+.+. |..... .+.+||++||+..++. .| ..++..+..+||.|+++|+||||.|. ...
T Consensus 8 ~~~~~~~~~~d~~~~~~~~~~~~~~-----~~g~Vvl~HG~~Eh~~-ry-~~la~~l~~~G~~V~~~D~RGhG~S~r~~r 80 (298)
T COG2267 8 TRTEGYFTGADGTRLRYRTWAAPEP-----PKGVVVLVHGLGEHSG-RY-EELADDLAARGFDVYALDLRGHGRSPRGQR 80 (298)
T ss_pred ccccceeecCCCceEEEEeecCCCC-----CCcEEEEecCchHHHH-HH-HHHHHHHHhCCCEEEEecCCCCCCCCCCCc
Confidence 456778888999888776 444332 3489999999977664 55 67899999999999999999999997 322
Q ss_pred CC-cccCCChhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchhHH
Q 015401 161 PQ-FYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNIV 239 (407)
Q Consensus 161 ~~-~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~~ 239 (407)
.. ..+..+.+|+.++++.+....+..+++++||||||.+++.++.+++.. |+++|+.+|.+.+.. ... ...
T Consensus 81 g~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~--i~~~vLssP~~~l~~--~~~----~~~ 152 (298)
T COG2267 81 GHVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPR--IDGLVLSSPALGLGG--AIL----RLI 152 (298)
T ss_pred CCchhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCcc--ccEEEEECccccCCh--hHH----HHH
Confidence 22 235677899999999999877888999999999999999999999977 999999888765432 000 000
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHhcCCCHHHHhhcccccc--CCCCCH---HHHHhhCC--cchhcCCCcc
Q 015401 240 YDKALASALCRIFKKHALLFEDMGGEFNIPLAANAKSVRQFDDGLTRVS--FGFKSV---DDYYSNSS--SSDSIKHVRI 312 (407)
Q Consensus 240 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~~--~~~~l~~i~~ 312 (407)
........+.+.... ................ .+...........+. .+.... ..+..... .......+++
T Consensus 153 ~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~--sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~ 229 (298)
T COG2267 153 LARLALKLLGRIRPK-LPVDSNLLEGVLTDDL--SRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIAL 229 (298)
T ss_pred HHHHhcccccccccc-cccCcccccCcCcchh--hcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccC
Confidence 000000000000000 0000000000000000 011111111111111 111111 11111111 3344677899
Q ss_pred ceeeeecCCCCCCC-CCCCChh-HHhcCCCeEEEEcCCCCceeecCCCC--CCCCCCCcHHHHHHHHHHH
Q 015401 313 PLLCIQAQNDPIAP-SRGIPCE-DIKANPNCLLILTPKGGHLGWVAGPE--APFGSPWTDPVVMDFLEHL 378 (407)
Q Consensus 313 Pvlii~g~~D~~~~-~~~~~~~-~~~~~~~~~~~~~~~~gH~~~~~~p~--~~~~~~w~~~~i~~fl~~~ 378 (407)
|+|+++|++|.+++ .+...+. .....+++++++++++.|..+.|... +. +.+.+.+|+.+.
T Consensus 230 PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~-----~~~~~~~~l~~~ 294 (298)
T COG2267 230 PVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREE-----VLKDILAWLAEA 294 (298)
T ss_pred CEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHH-----HHHHHHHHHHhh
Confidence 99999999999999 5554322 23456788999999999999888765 21 555666666554
No 25
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.93 E-value=2.7e-26 Score=203.16 Aligned_cols=240 Identities=23% Similarity=0.277 Sum_probs=147.5
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCC-CCcccCCChhHHHHHHHHHHhhCCCCcEEE
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTT-PQFYSASFLGDMQEVVAHVGSKYPKAHLYA 190 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~-~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~l 190 (407)
++|+||++||+++++. .| ...+.. +.++|+|+++|+||||.|.... ..++.+++++|+.++++.++.. ++++
T Consensus 12 ~~~~iv~lhG~~~~~~-~~-~~~~~~-l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~l 84 (257)
T TIGR03611 12 DAPVVVLSSGLGGSGS-YW-APQLDV-LTQRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDALNIE----RFHF 84 (257)
T ss_pred CCCEEEEEcCCCcchh-HH-HHHHHH-HHhccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhCCC----cEEE
Confidence 6789999999987653 44 455544 4568999999999999997543 3356677788888888877654 8999
Q ss_pred EEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHH
Q 015401 191 VGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNIVYDKALASALCRIFKKHALLFEDMGGEFNIPL 270 (407)
Q Consensus 191 vG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 270 (407)
+||||||.+++.++.++|+. ++++|++++.......... .+.. ....+..............+ .... ..
T Consensus 85 ~G~S~Gg~~a~~~a~~~~~~--v~~~i~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~----~~ 153 (257)
T TIGR03611 85 VGHALGGLIGLQLALRYPER--LLSLVLINAWSRPDPHTRR---CFDV-RIALLQHAGPEAYVHAQALF-LYPA----DW 153 (257)
T ss_pred EEechhHHHHHHHHHHChHH--hHHheeecCCCCCChhHHH---HHHH-HHHHHhccCcchhhhhhhhh-hccc----cH
Confidence 99999999999999999988 9999998864322110000 0000 00000000000000000000 0000 00
Q ss_pred Hhc-CCCHHHHhhccccccCCCCCH---HHHHhhCCcchhcCCCccceeeeecCCCCCCCCCCCChhHHhcCCCeEEEEc
Q 015401 271 AAN-AKSVRQFDDGLTRVSFGFKSV---DDYYSNSSSSDSIKHVRIPLLCIQAQNDPIAPSRGIPCEDIKANPNCLLILT 346 (407)
Q Consensus 271 ~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 346 (407)
... ................+.... .......+....+.++++|+++++|++|.+++++.. +.+.+..++++++.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~-~~~~~~~~~~~~~~~ 232 (257)
T TIGR03611 154 ISENAARLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQS-LRLAAALPNAQLKLL 232 (257)
T ss_pred hhccchhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHH-HHHHHhcCCceEEEE
Confidence 000 000000000000000000000 011222344466788999999999999999998765 566777899999999
Q ss_pred CCCCceeecCCCCCCCCCCCcHHHHHHHHH
Q 015401 347 PKGGHLGWVAGPEAPFGSPWTDPVVMDFLE 376 (407)
Q Consensus 347 ~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~ 376 (407)
+++||..++++|+. +.+.|.+||+
T Consensus 233 ~~~gH~~~~~~~~~------~~~~i~~fl~ 256 (257)
T TIGR03611 233 PYGGHASNVTDPET------FNRALLDFLK 256 (257)
T ss_pred CCCCCCccccCHHH------HHHHHHHHhc
Confidence 99999999999988 8999999985
No 26
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.93 E-value=2.3e-25 Score=199.97 Aligned_cols=257 Identities=15% Similarity=0.171 Sum_probs=146.7
Q ss_pred CccEEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCC-
Q 015401 83 KLKRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTP- 161 (407)
Q Consensus 83 ~~~r~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~- 161 (407)
++....+++ +|..+.+ ...+ .+|+|||+||++.++. .| ..++.. +.++|+|+++|+||||.|+.+..
T Consensus 13 ~~~~~~~~~-~~~~i~y--~~~G------~~~~iv~lHG~~~~~~-~~-~~~~~~-l~~~~~vi~~D~~G~G~S~~~~~~ 80 (286)
T PRK03204 13 PFESRWFDS-SRGRIHY--IDEG------TGPPILLCHGNPTWSF-LY-RDIIVA-LRDRFRCVAPDYLGFGLSERPSGF 80 (286)
T ss_pred cccceEEEc-CCcEEEE--EECC------CCCEEEEECCCCccHH-HH-HHHHHH-HhCCcEEEEECCCCCCCCCCCCcc
Confidence 355566666 4445543 3322 4588999999865332 33 444444 45679999999999999976432
Q ss_pred CcccCCChhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchhHHHH
Q 015401 162 QFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNIVYD 241 (407)
Q Consensus 162 ~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~~~~ 241 (407)
.++.+.+++++.++++++... +++++||||||.+++.++..+|++ |+++|+++++...... .. ...+.....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~----~~~lvG~S~Gg~va~~~a~~~p~~--v~~lvl~~~~~~~~~~-~~-~~~~~~~~~ 152 (286)
T PRK03204 81 GYQIDEHARVIGEFVDHLGLD----RYLSMGQDWGGPISMAVAVERADR--VRGVVLGNTWFWPADT-LA-MKAFSRVMS 152 (286)
T ss_pred ccCHHHHHHHHHHHHHHhCCC----CEEEEEECccHHHHHHHHHhChhh--eeEEEEECccccCCCc-hh-HHHHHHHhc
Confidence 344455666676666666544 899999999999999999999999 9999988764311000 00 000000000
Q ss_pred H-HHHHH-HH-HHHHHHHhhhhh-cCCCCCHHHHhcCCCHHHHhhcccccc---------CCCCCHHHHHhhCCcchhcC
Q 015401 242 K-ALASA-LC-RIFKKHALLFED-MGGEFNIPLAANAKSVRQFDDGLTRVS---------FGFKSVDDYYSNSSSSDSIK 308 (407)
Q Consensus 242 ~-~~~~~-l~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~l~ 308 (407)
. ..... +. .... ...+.. ......... ...+......+. ..+......... ....+.
T Consensus 153 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 222 (286)
T PRK03204 153 SPPVQYAILRRNFFV--ERLIPAGTEHRPSSAV------MAHYRAVQPNAAARRGVAEMPKQILAARPLLAR--LAREVP 222 (286)
T ss_pred cccchhhhhhhhHHH--HHhccccccCCCCHHH------HHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHH--hhhhhh
Confidence 0 00000 00 0000 000000 000000000 000000000000 000000000000 001111
Q ss_pred --CCccceeeeecCCCCCCCCCCCChhHHhcCCCeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHH
Q 015401 309 --HVRIPLLCIQAQNDPIAPSRGIPCEDIKANPNCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFL 375 (407)
Q Consensus 309 --~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl 375 (407)
.+++|+++|+|++|.++++....+.+.+..|+.++++++++||+.++|+|+. +++.|.+||
T Consensus 223 ~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~ip~~~~~~i~~aGH~~~~e~Pe~------~~~~i~~~~ 285 (286)
T PRK03204 223 ATLGTKPTLLVWGMKDVAFRPKTILPRLRATFPDHVLVELPNAKHFIQEDAPDR------IAAAIIERF 285 (286)
T ss_pred hhcCCCCeEEEecCCCcccCcHHHHHHHHHhcCCCeEEEcCCCcccccccCHHH------HHHHHHHhc
Confidence 1289999999999998876543357778899999999999999999999998 999999997
No 27
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.93 E-value=6.4e-26 Score=199.72 Aligned_cols=239 Identities=18% Similarity=0.289 Sum_probs=149.7
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEE
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAV 191 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lv 191 (407)
++|+||++||++++.. .| ..++..+ +.||+|+++|+||||.|+.....++...+++|+.++++.+..+ +++++
T Consensus 12 ~~~~li~~hg~~~~~~-~~-~~~~~~l-~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~----~v~li 84 (251)
T TIGR02427 12 GAPVLVFINSLGTDLR-MW-DPVLPAL-TPDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHLGIE----RAVFC 84 (251)
T ss_pred CCCeEEEEcCcccchh-hH-HHHHHHh-hcccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC----ceEEE
Confidence 5789999999866543 44 4555544 6799999999999999976555566677788888888877654 89999
Q ss_pred EechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHH
Q 015401 192 GWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNIVYDKALASALCRIFKKHALLFEDMGGEFNIPLA 271 (407)
Q Consensus 192 G~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 271 (407)
|||+||++++.+|.++|++ ++++|+++++........ +......... ..+..........+ ....+...
T Consensus 85 G~S~Gg~~a~~~a~~~p~~--v~~li~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~--~~~~~~~~-- 153 (251)
T TIGR02427 85 GLSLGGLIAQGLAARRPDR--VRALVLSNTAAKIGTPES-WNARIAAVRA----EGLAALADAVLERW--FTPGFREA-- 153 (251)
T ss_pred EeCchHHHHHHHHHHCHHH--hHHHhhccCccccCchhh-HHHHHhhhhh----ccHHHHHHHHHHHH--cccccccC--
Confidence 9999999999999999998 999998876542211110 0000000000 00000000000000 00000000
Q ss_pred hcCCCHHHHhhcccc-ccCCCCCHHHHHhhCCcchhcCCCccceeeeecCCCCCCCCCCCChhHHhcCCCeEEEEcCCCC
Q 015401 272 ANAKSVRQFDDGLTR-VSFGFKSVDDYYSNSSSSDSIKHVRIPLLCIQAQNDPIAPSRGIPCEDIKANPNCLLILTPKGG 350 (407)
Q Consensus 272 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~g 350 (407)
.......+...+.. ....+......+...+....+.++++|+++++|++|.+++.+.. +.+.+..++.++++++++|
T Consensus 154 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~g 231 (251)
T TIGR02427 154 -HPARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELV-REIADLVPGARFAEIRGAG 231 (251)
T ss_pred -ChHHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHH-HHHHHhCCCceEEEECCCC
Confidence 00000111110000 00011111122233344466788999999999999999998765 5667778899999999999
Q ss_pred ceeecCCCCCCCCCCCcHHHHHHHHH
Q 015401 351 HLGWVAGPEAPFGSPWTDPVVMDFLE 376 (407)
Q Consensus 351 H~~~~~~p~~~~~~~w~~~~i~~fl~ 376 (407)
|..+++.|+. +.+.|.+|++
T Consensus 232 H~~~~~~p~~------~~~~i~~fl~ 251 (251)
T TIGR02427 232 HIPCVEQPEA------FNAALRDFLR 251 (251)
T ss_pred CcccccChHH------HHHHHHHHhC
Confidence 9999999987 8899998873
No 28
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.93 E-value=4.7e-26 Score=200.07 Aligned_cols=229 Identities=16% Similarity=0.211 Sum_probs=137.0
Q ss_pred CcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEEE
Q 015401 113 SPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVG 192 (407)
Q Consensus 113 ~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG 192 (407)
+|+|||+||+++++. .| ..++..+ ++|+|+++|+||||.|+.+.. .+...+++|+.++++.+... +++++|
T Consensus 2 ~p~vvllHG~~~~~~-~w-~~~~~~l--~~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~l~~~l~~~~~~----~~~lvG 72 (242)
T PRK11126 2 LPWLVFLHGLLGSGQ-DW-QPVGEAL--PDYPRLYIDLPGHGGSAAISV-DGFADVSRLLSQTLQSYNIL----PYWLVG 72 (242)
T ss_pred CCEEEEECCCCCChH-HH-HHHHHHc--CCCCEEEecCCCCCCCCCccc-cCHHHHHHHHHHHHHHcCCC----CeEEEE
Confidence 578999999987664 55 5666655 479999999999999976433 35566777888888876554 999999
Q ss_pred echhHHHHHHHHhccCC-CCCceeEEEEcCCCCHHHHHHHHhcch-hHHHHHHHH-HHHHHHHHHHH--hhhhhcCCCCC
Q 015401 193 WSLGANILIRYLGHESH-SCPLSGAVSLCNPFNLVIADQDFRKGF-NIVYDKALA-SALCRIFKKHA--LLFEDMGGEFN 267 (407)
Q Consensus 193 ~S~Gg~ia~~~a~~~p~-~~~v~~~v~l~~p~~~~~~~~~~~~~~-~~~~~~~~~-~~l~~~~~~~~--~~~~~~~~~~~ 267 (407)
|||||.+++.+|.++++ + |+++++++++.............. ...+...+. ..+........ ..+.. ..
T Consensus 73 ~S~Gg~va~~~a~~~~~~~--v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 146 (242)
T PRK11126 73 YSLGGRIAMYYACQGLAGG--LCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFAS----LN 146 (242)
T ss_pred ECHHHHHHHHHHHhCCccc--ccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhhc----cC
Confidence 99999999999999854 5 999998876543221111000000 000000000 00000000000 00000 00
Q ss_pred HHHHhcCCCHHHHhhccccccCCCCCHHHHHh------hCCcchhcCCCccceeeeecCCCCCCCCCCCChhHHhcCCCe
Q 015401 268 IPLAANAKSVRQFDDGLTRVSFGFKSVDDYYS------NSSSSDSIKHVRIPLLCIQAQNDPIAPSRGIPCEDIKANPNC 341 (407)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~ 341 (407)
......+...... ..+ .....++. ..+..+.+.++++|+++|+|++|+.+. .... ..++
T Consensus 147 ------~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~------~~~~-~~~~ 211 (242)
T PRK11126 147 ------AEQRQQLVAKRSN-NNG-AAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ------ALAQ-QLAL 211 (242)
T ss_pred ------ccHHHHHHHhccc-CCH-HHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH------HHHH-HhcC
Confidence 0000000000000 000 00011111 112345678999999999999998542 2222 2478
Q ss_pred EEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHH
Q 015401 342 LLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEH 377 (407)
Q Consensus 342 ~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~ 377 (407)
++++++++||+.++|+|++ +++.|.+|++.
T Consensus 212 ~~~~i~~~gH~~~~e~p~~------~~~~i~~fl~~ 241 (242)
T PRK11126 212 PLHVIPNAGHNAHRENPAA------FAASLAQILRL 241 (242)
T ss_pred eEEEeCCCCCchhhhChHH------HHHHHHHHHhh
Confidence 9999999999999999998 99999999864
No 29
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.93 E-value=9.9e-26 Score=197.87 Aligned_cols=235 Identities=15% Similarity=0.238 Sum_probs=137.1
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEE
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAV 191 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lv 191 (407)
+.|+|||+||++++.. .| ..++..+ ..+|+|+++|+||+|.|+... ..+ +.++++.+.... ..+++++
T Consensus 3 g~~~iv~~HG~~~~~~-~~-~~~~~~l-~~~~~vi~~d~~G~G~s~~~~-~~~-------~~~~~~~~~~~~-~~~~~lv 70 (245)
T TIGR01738 3 GNVHLVLIHGWGMNAE-VF-RCLDEEL-SAHFTLHLVDLPGHGRSRGFG-PLS-------LADAAEAIAAQA-PDPAIWL 70 (245)
T ss_pred CCceEEEEcCCCCchh-hH-HHHHHhh-ccCeEEEEecCCcCccCCCCC-CcC-------HHHHHHHHHHhC-CCCeEEE
Confidence 3488999999876553 44 5566555 567999999999999986432 122 222222222222 2489999
Q ss_pred EechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchh-HHHHHH---HHHHHHHHHHHHHhhhhhcCCCCC
Q 015401 192 GWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFN-IVYDKA---LASALCRIFKKHALLFEDMGGEFN 267 (407)
Q Consensus 192 G~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~-~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~ 267 (407)
||||||.+++.++.++|++ +.++|++++....... ..+..... ...... +.............. ........
T Consensus 71 G~S~Gg~~a~~~a~~~p~~--v~~~il~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 146 (245)
T TIGR01738 71 GWSLGGLVALHIAATHPDR--VRALVTVASSPCFSAR-EDWPEGIKPDVLTGFQQQLSDDYQRTIERFLAL-QTLGTPTA 146 (245)
T ss_pred EEcHHHHHHHHHHHHCHHh--hheeeEecCCcccccC-CcccccCCHHHHHHHHHHhhhhHHHHHHHHHHH-HHhcCCcc
Confidence 9999999999999999998 9999998764321100 00000000 000000 000000000000000 00000000
Q ss_pred HHHHhcCCCHHHHhhccccccC----CCCCHHHHHhhCCcchhcCCCccceeeeecCCCCCCCCCCCChhHHhcCCCeEE
Q 015401 268 IPLAANAKSVRQFDDGLTRVSF----GFKSVDDYYSNSSSSDSIKHVRIPLLCIQAQNDPIAPSRGIPCEDIKANPNCLL 343 (407)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~ 343 (407)
. .....+...+..... .+......+...+....+.+|++|+++++|++|.+++++.. +.+.+..+++++
T Consensus 147 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~-~~~~~~~~~~~~ 219 (245)
T TIGR01738 147 R------QDARALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVV-PYLDKLAPHSEL 219 (245)
T ss_pred c------hHHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHH-HHHHHhCCCCeE
Confidence 0 000011110000000 00001111223334466789999999999999999998765 566778899999
Q ss_pred EEcCCCCceeecCCCCCCCCCCCcHHHHHHHH
Q 015401 344 ILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFL 375 (407)
Q Consensus 344 ~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl 375 (407)
++++++||++++++|++ +++.|.+|+
T Consensus 220 ~~~~~~gH~~~~e~p~~------~~~~i~~fi 245 (245)
T TIGR01738 220 YIFAKAAHAPFLSHAEA------FCALLVAFK 245 (245)
T ss_pred EEeCCCCCCccccCHHH------HHHHHHhhC
Confidence 99999999999999998 999999885
No 30
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.93 E-value=8.6e-25 Score=202.65 Aligned_cols=267 Identities=17% Similarity=0.194 Sum_probs=160.9
Q ss_pred ccEEEEEcCCCCEEEEE-eecCCCCCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCC
Q 015401 84 LKRECIRTKDDGSVALD-WISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQ 162 (407)
Q Consensus 84 ~~r~~~~~~dg~~~~~~-~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~ 162 (407)
.....+..++|..+.+. |.+.. ...+++||++||++++.. .| ..++..+.++||+|+++|+||||.|+.....
T Consensus 110 ~~~~~~~~~~~~~l~~~~~~p~~----~~~~~~Vl~lHG~~~~~~-~~-~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~ 183 (395)
T PLN02652 110 WATSLFYGARRNALFCRSWAPAA----GEMRGILIIIHGLNEHSG-RY-LHFAKQLTSCGFGVYAMDWIGHGGSDGLHGY 183 (395)
T ss_pred EEEEEEECCCCCEEEEEEecCCC----CCCceEEEEECCchHHHH-HH-HHHHHHHHHCCCEEEEeCCCCCCCCCCCCCC
Confidence 34455666777766655 43322 235689999999976543 34 6778888889999999999999999764321
Q ss_pred -cccCCChhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCC-CCceeEEEEcCCCCHHHHHHHHhcchhHHH
Q 015401 163 -FYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHS-CPLSGAVSLCNPFNLVIADQDFRKGFNIVY 240 (407)
Q Consensus 163 -~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~-~~v~~~v~l~~p~~~~~~~~~~~~~~~~~~ 240 (407)
.+.+.+.+|+.++++.+...++..+++++||||||.+++.++. +|+. ..++++|+.++........ ..
T Consensus 184 ~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~-~~-------- 253 (395)
T PLN02652 184 VPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAH-PI-------- 253 (395)
T ss_pred CcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccch-HH--------
Confidence 2345668899999999998877778999999999999998764 5541 1289999887654322110 00
Q ss_pred HHHHHHHHHHHHHHHHh--hhhhcCCCCCHHHHhcCCC-HHHHhhccccccCCCCCHH---HHHhhC-CcchhcCCCccc
Q 015401 241 DKALASALCRIFKKHAL--LFEDMGGEFNIPLAANAKS-VRQFDDGLTRVSFGFKSVD---DYYSNS-SSSDSIKHVRIP 313 (407)
Q Consensus 241 ~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~l~~i~~P 313 (407)
...+ ......... .+.... ............ ...+.+.... .+..... +.+... .....+.+|++|
T Consensus 254 ~~~~----~~l~~~~~p~~~~~~~~-~~~~~~s~~~~~~~~~~~dp~~~--~g~i~~~~~~~~~~~~~~l~~~L~~I~vP 326 (395)
T PLN02652 254 VGAV----APIFSLVAPRFQFKGAN-KRGIPVSRDPAALLAKYSDPLVY--TGPIRVRTGHEILRISSYLTRNFKSVTVP 326 (395)
T ss_pred HHHH----HHHHHHhCCCCcccCcc-cccCCcCCCHHHHHHHhcCCCcc--cCCchHHHHHHHHHHHHHHHhhcccCCCC
Confidence 0000 000000000 000000 000000000000 0011111100 0111111 111111 123567889999
Q ss_pred eeeeecCCCCCCCCCCCChhHHhc--CCCeEEEEcCCCCceeecC-CCCCCCCCCCcHHHHHHHHHHHHH
Q 015401 314 LLCIQAQNDPIAPSRGIPCEDIKA--NPNCLLILTPKGGHLGWVA-GPEAPFGSPWTDPVVMDFLEHLER 380 (407)
Q Consensus 314 vlii~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~-~p~~~~~~~w~~~~i~~fl~~~~~ 380 (407)
+|+++|++|.++|++.. +.+.+. .+++++.++++++|..+++ .+++ +.+.+.+||++...
T Consensus 327 vLIi~G~~D~vvp~~~a-~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~------v~~~I~~FL~~~~~ 389 (395)
T PLN02652 327 FMVLHGTADRVTDPLAS-QDLYNEAASRHKDIKLYDGFLHDLLFEPEREE------VGRDIIDWMEKRLD 389 (395)
T ss_pred EEEEEeCCCCCCCHHHH-HHHHHhcCCCCceEEEECCCeEEeccCCCHHH------HHHHHHHHHHHHhh
Confidence 99999999999998866 344333 3468899999999998887 4555 88999999987653
No 31
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.93 E-value=1.3e-24 Score=184.28 Aligned_cols=281 Identities=12% Similarity=0.106 Sum_probs=174.0
Q ss_pred CCCCCccEEEEEcCCCCEEEEE-eecCCCCCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCC
Q 015401 79 LPDVKLKRECIRTKDDGSVALD-WISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSP 157 (407)
Q Consensus 79 ~~~~~~~r~~~~~~dg~~~~~~-~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~ 157 (407)
...+.+...+++.++|..+... |.+-.+ +..+..|+++||+++.+. ..+..++..+...||.|+++|++|||.|+
T Consensus 22 ~~~~~~~~~~~~n~rG~~lft~~W~p~~~---~~pr~lv~~~HG~g~~~s-~~~~~~a~~l~~~g~~v~a~D~~GhG~Sd 97 (313)
T KOG1455|consen 22 DGGVTYSESFFTNPRGAKLFTQSWLPLSG---TEPRGLVFLCHGYGEHSS-WRYQSTAKRLAKSGFAVYAIDYEGHGRSD 97 (313)
T ss_pred CCccceeeeeEEcCCCCEeEEEecccCCC---CCCceEEEEEcCCcccch-hhHHHHHHHHHhCCCeEEEeeccCCCcCC
Confidence 3455677888999999887655 554221 247789999999987664 33477888999999999999999999998
Q ss_pred CCCCC-cccCCChhHHHHHHHHHHhh--CCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhc
Q 015401 158 VTTPQ-FYSASFLGDMQEVVAHVGSK--YPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRK 234 (407)
Q Consensus 158 ~~~~~-~~~~~~~~Dl~~~l~~l~~~--~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~ 234 (407)
+.... -+++..++|+...++.++.+ +++.+.+++||||||.+++.++.+.|+. .+++|++++...+... ..
T Consensus 98 Gl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~--w~G~ilvaPmc~i~~~---~k- 171 (313)
T KOG1455|consen 98 GLHAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNF--WDGAILVAPMCKISED---TK- 171 (313)
T ss_pred CCcccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcc--cccceeeecccccCCc---cC-
Confidence 65433 23466688999999976554 5667999999999999999999999998 9999998875422110 00
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHhcCCCHHHH---hhccccccCCCCCHHHHHhhC-CcchhcCCC
Q 015401 235 GFNIVYDKALASALCRIFKKHALLFEDMGGEFNIPLAANAKSVRQF---DDGLTRVSFGFKSVDDYYSNS-SSSDSIKHV 310 (407)
Q Consensus 235 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~i 310 (407)
.......+...+..+..+ +...+..-......+....+.. +...........+..+.++.. +....+.++
T Consensus 172 --p~p~v~~~l~~l~~liP~----wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~v 245 (313)
T KOG1455|consen 172 --PHPPVISILTLLSKLIPT----WKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEV 245 (313)
T ss_pred --CCcHHHHHHHHHHHhCCc----eeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccc
Confidence 000001111111111111 1100000000000000011111 111111111222333433332 345678999
Q ss_pred ccceeeeecCCCCCCCCCCCChhH-HhcCCCeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHH
Q 015401 311 RIPLLCIQAQNDPIAPSRGIPCED-IKANPNCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEH 377 (407)
Q Consensus 311 ~~Pvlii~g~~D~~~~~~~~~~~~-~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~ 377 (407)
++|++++||++|.++.+..+.... .+...+.++.++|+.-|..+.-.+++. ..-+...|.+||++
T Consensus 246 tvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en--~e~Vf~DI~~Wl~~ 311 (313)
T KOG1455|consen 246 TVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDEN--VEIVFGDIISWLDE 311 (313)
T ss_pred cccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchh--HHHHHHHHHHHHHh
Confidence 999999999999999998774322 234578999999999999876444431 11144556677764
No 32
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.92 E-value=1.6e-24 Score=199.59 Aligned_cols=239 Identities=15% Similarity=0.217 Sum_probs=145.3
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCC----CcccCCChhHHHHHHHHHHhhCCCCc
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTP----QFYSASFLGDMQEVVAHVGSKYPKAH 187 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~----~~~~~~~~~Dl~~~l~~l~~~~~~~~ 187 (407)
++|+|||+||++++.. .| ..++..| +.+|+|+++|+||||.|+.+.. .++.+.+++|+.++++.+... +
T Consensus 126 ~~~~ivllHG~~~~~~-~w-~~~~~~L-~~~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~~~----~ 198 (383)
T PLN03084 126 NNPPVLLIHGFPSQAY-SY-RKVLPVL-SKNYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDELKSD----K 198 (383)
T ss_pred CCCeEEEECCCCCCHH-HH-HHHHHHH-hcCCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHhCCC----C
Confidence 5689999999976554 44 5666555 5689999999999999986543 356778899999999998876 8
Q ss_pred EEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchhHHHHHHHHHHHHH-HHHHHHhhhhhcCC-C
Q 015401 188 LYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNIVYDKALASALCR-IFKKHALLFEDMGG-E 265 (407)
Q Consensus 188 v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~-~ 265 (407)
++++|||+||.+++.+|.++|++ |+++|+++++...... .....+..+....+...+.. ........+..... .
T Consensus 199 ~~LvG~s~GG~ia~~~a~~~P~~--v~~lILi~~~~~~~~~--~~p~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 274 (383)
T PLN03084 199 VSLVVQGYFSPPVVKYASAHPDK--IKKLILLNPPLTKEHA--KLPSTLSEFSNFLLGEIFSQDPLRASDKALTSCGPYA 274 (383)
T ss_pred ceEEEECHHHHHHHHHHHhChHh--hcEEEEECCCCccccc--cchHHHHHHHHHHhhhhhhcchHHHHhhhhcccCccC
Confidence 99999999999999999999999 9999999987532110 00000000000000000000 00000000000000 0
Q ss_pred CCHHHHhcCCCHHHHhhccccccC-CCCCHHHHHhhC---------Ccchh--cCCCccceeeeecCCCCCCCCCCCChh
Q 015401 266 FNIPLAANAKSVRQFDDGLTRVSF-GFKSVDDYYSNS---------SSSDS--IKHVRIPLLCIQAQNDPIAPSRGIPCE 333 (407)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---------~~~~~--l~~i~~Pvlii~g~~D~~~~~~~~~~~ 333 (407)
.... ....+...+..... .+ .....++.. +.... ..+|++|+++|+|++|.+++.+.. +.
T Consensus 275 ~~~e------~~~~~~~~~~~~~~~~~-~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~-~~ 346 (383)
T PLN03084 275 MKED------DAMVYRRPYLTSGSSGF-ALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYDGV-ED 346 (383)
T ss_pred CCHH------HHHHHhccccCCcchHH-HHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHHHH-HH
Confidence 0000 00001000000000 00 000000000 00011 146899999999999999988754 34
Q ss_pred HHhcCCCeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHH
Q 015401 334 DIKANPNCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLE 376 (407)
Q Consensus 334 ~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~ 376 (407)
+.+. ++.++++++++||+.+.|.|++ +++.|.+|+.
T Consensus 347 ~a~~-~~a~l~vIp~aGH~~~~E~Pe~------v~~~I~~Fl~ 382 (383)
T PLN03084 347 FCKS-SQHKLIELPMAGHHVQEDCGEE------LGGIISGILS 382 (383)
T ss_pred HHHh-cCCeEEEECCCCCCcchhCHHH------HHHHHHHHhh
Confidence 4444 5889999999999999999998 9999999985
No 33
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.92 E-value=1.5e-25 Score=194.12 Aligned_cols=220 Identities=22% Similarity=0.358 Sum_probs=138.5
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCC--CcccCCChhHHHHHHHHHHhhCCCCcEEEEEe
Q 015401 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTP--QFYSASFLGDMQEVVAHVGSKYPKAHLYAVGW 193 (407)
Q Consensus 116 vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~--~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~ 193 (407)
|||+||++++.. .| ..++..+ ++||+|+++|+||+|.|+.... ..+.+++++|+.++++.+... +++++||
T Consensus 1 vv~~hG~~~~~~-~~-~~~~~~l-~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~----~~~lvG~ 73 (228)
T PF12697_consen 1 VVFLHGFGGSSE-SW-DPLAEAL-ARGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIK----KVILVGH 73 (228)
T ss_dssp EEEE-STTTTGG-GG-HHHHHHH-HTTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTS----SEEEEEE
T ss_pred eEEECCCCCCHH-HH-HHHHHHH-hCCCEEEEEecCCccccccccccCCcchhhhhhhhhhcccccccc----ccccccc
Confidence 799999987663 44 6677767 6899999999999999976542 345566678888888877764 9999999
Q ss_pred chhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHH--HHHhcchhHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHH
Q 015401 194 SLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIAD--QDFRKGFNIVYDKALASALCRIFKKHALLFEDMGGEFNIPLA 271 (407)
Q Consensus 194 S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 271 (407)
|+||.+++.++.++|++ |+++|+++++....... ......+..+....... ........ ...... .......
T Consensus 74 S~Gg~~a~~~a~~~p~~--v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~-~~~~~~~ 147 (228)
T PF12697_consen 74 SMGGMIALRLAARYPDR--VKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRS-LRRLASRF--FYRWFD-GDEPEDL 147 (228)
T ss_dssp THHHHHHHHHHHHSGGG--EEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHH-HHHHHHHH--HHHHHT-HHHHHHH
T ss_pred ccccccccccccccccc--cccceeecccccccccccccccchhhhhhhhccccc-cccccccc--cccccc-ccccccc
Confidence 99999999999999998 99999999988654332 11111111111100000 00000000 000000 0000000
Q ss_pred hcCCCHHHHhhccccccCCCCCHHHHHhhCCcchhcCCCccceeeeecCCCCCCCCCCCChhHHhcCCCeEEEEcCCCCc
Q 015401 272 ANAKSVRQFDDGLTRVSFGFKSVDDYYSNSSSSDSIKHVRIPLLCIQAQNDPIAPSRGIPCEDIKANPNCLLILTPKGGH 351 (407)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH 351 (407)
... ....+.+.+... +...+....+.++++|+++++|++|.+++.+.. +.+.+..+++++++++++||
T Consensus 148 ~~~-~~~~~~~~~~~~----------~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~gH 215 (228)
T PF12697_consen 148 IRS-SRRALAEYLRSN----------LWQADLSEALPRIKVPVLVIHGEDDPIVPPESA-EELADKLPNAELVVIPGAGH 215 (228)
T ss_dssp HHH-HHHHHHHHHHHH----------HHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHH-HHHHHHSTTEEEEEETTSSS
T ss_pred ccc-cccccccccccc----------cccccccccccccCCCeEEeecCCCCCCCHHHH-HHHHHHCCCCEEEEECCCCC
Confidence 000 000000000000 111223356778899999999999999986554 56677789999999999999
Q ss_pred eeecCCCCC
Q 015401 352 LGWVAGPEA 360 (407)
Q Consensus 352 ~~~~~~p~~ 360 (407)
+.++++|++
T Consensus 216 ~~~~~~p~~ 224 (228)
T PF12697_consen 216 FLFLEQPDE 224 (228)
T ss_dssp THHHHSHHH
T ss_pred ccHHHCHHH
Confidence 999999875
No 34
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.92 E-value=1.1e-23 Score=182.00 Aligned_cols=285 Identities=14% Similarity=0.183 Sum_probs=164.4
Q ss_pred HHHHHHhhhcCCCCCCccEEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEE
Q 015401 68 VETIFAAFFRSLPDVKLKRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVV 147 (407)
Q Consensus 68 ~qt~~~~~~~~~~~~~~~r~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~ 147 (407)
++++-...++ .-.+++..+++..+++..+-..-...+ +.++.++|++||++++.. .|+.. ...|. +.++|++
T Consensus 50 l~~~e~ril~-~~~v~~~~~~v~i~~~~~iw~~~~~~~----~~~~~plVliHGyGAg~g-~f~~N-f~~La-~~~~vya 121 (365)
T KOG4409|consen 50 LKEAEKRILS-SVPVPYSKKYVRIPNGIEIWTITVSNE----SANKTPLVLIHGYGAGLG-LFFRN-FDDLA-KIRNVYA 121 (365)
T ss_pred HHHHHHhhhh-hcCCCcceeeeecCCCceeEEEeeccc----ccCCCcEEEEeccchhHH-HHHHh-hhhhh-hcCceEE
Confidence 4444443333 345788889999887665533322222 247899999999987664 55443 34444 4899999
Q ss_pred EeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHH
Q 015401 148 FNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVI 227 (407)
Q Consensus 148 ~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~ 227 (407)
+|++|+|+|+.+.-............+-+++.+..-+-.+.+|+|||+||+++..||.+||++ |+.+|++++--....
T Consensus 122 iDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPer--V~kLiLvsP~Gf~~~ 199 (365)
T KOG4409|consen 122 IDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPER--VEKLILVSPWGFPEK 199 (365)
T ss_pred ecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHh--hceEEEecccccccC
Confidence 999999999876544444444445566666666666666999999999999999999999999 999999876321110
Q ss_pred --HHHHHhcchhHHHHHHHH------------HHH----HHHHHHHH-hhhhhcCCCCCHHHHhcCCCHHHHh-hccccc
Q 015401 228 --ADQDFRKGFNIVYDKALA------------SAL----CRIFKKHA-LLFEDMGGEFNIPLAANAKSVRQFD-DGLTRV 287 (407)
Q Consensus 228 --~~~~~~~~~~~~~~~~~~------------~~l----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 287 (407)
............+ ..+. +.+ ..+..+.. ..+...+.....+ .+.++- ......
T Consensus 200 ~~~~~~~~~~~~~w~-~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed------~l~~YiY~~n~~~ 272 (365)
T KOG4409|consen 200 PDSEPEFTKPPPEWY-KALFLVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEED------FLHEYIYHCNAQN 272 (365)
T ss_pred CCcchhhcCCChHHH-hhhhhhhhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhH------HHHHHHHHhcCCC
Confidence 1111111111111 0000 000 00011000 0111111000000 011111 000000
Q ss_pred cCCCCCHHHH-----HhhCCcchhcCCCc--cceeeeecCCCCCCCCCCCChhHHh--cCCCeEEEEcCCCCceeecCCC
Q 015401 288 SFGFKSVDDY-----YSNSSSSDSIKHVR--IPLLCIQAQNDPIAPSRGIPCEDIK--ANPNCLLILTPKGGHLGWVAGP 358 (407)
Q Consensus 288 ~~~~~~~~~~-----~~~~~~~~~l~~i~--~Pvlii~g~~D~~~~~~~~~~~~~~--~~~~~~~~~~~~~gH~~~~~~p 358 (407)
..|-...... +.+....+++..++ ||+++|+|++|-+-.... ..... ....++.++++++||..++++|
T Consensus 273 psgE~~fk~l~~~~g~Ar~Pm~~r~~~l~~~~pv~fiyG~~dWmD~~~g--~~~~~~~~~~~~~~~~v~~aGHhvylDnp 350 (365)
T KOG4409|consen 273 PSGETAFKNLFEPGGWARRPMIQRLRELKKDVPVTFIYGDRDWMDKNAG--LEVTKSLMKEYVEIIIVPGAGHHVYLDNP 350 (365)
T ss_pred CcHHHHHHHHHhccchhhhhHHHHHHhhccCCCEEEEecCcccccchhH--HHHHHHhhcccceEEEecCCCceeecCCH
Confidence 0000000000 11222334555555 999999999997544333 23333 4566899999999999999999
Q ss_pred CCCCCCCCcHHHHHHHHHH
Q 015401 359 EAPFGSPWTDPVVMDFLEH 377 (407)
Q Consensus 359 ~~~~~~~w~~~~i~~fl~~ 377 (407)
+. |++.|.++++.
T Consensus 351 ~~------Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 351 EF------FNQIVLEECDK 363 (365)
T ss_pred HH------HHHHHHHHHhc
Confidence 98 99999998864
No 35
>PRK07581 hypothetical protein; Validated
Probab=99.92 E-value=3e-24 Score=197.92 Aligned_cols=250 Identities=12% Similarity=0.142 Sum_probs=142.7
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHH---HHHHhCCcEEEEEeCCCCCCCCCCCC---CcccCC-----ChhHHHH----HH
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHML---LRARSKGWRVVVFNSRGCGDSPVTTP---QFYSAS-----FLGDMQE----VV 176 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~---~~l~~~g~~vi~~D~rG~G~S~~~~~---~~~~~~-----~~~Dl~~----~l 176 (407)
..|+||++||++++.. .| ..++ ..+...+|+||++|+||||.|+.+.. .++.+. +++|+.+ ++
T Consensus 40 ~~~~vll~~~~~~~~~-~~-~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 117 (339)
T PRK07581 40 KDNAILYPTWYSGTHQ-DN-EWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLT 117 (339)
T ss_pred CCCEEEEeCCCCCCcc-cc-hhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHH
Confidence 4467777777765443 22 2222 24545789999999999999975432 233333 4678876 44
Q ss_pred HHHHhhCCCCc-EEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchhH-H--------------H
Q 015401 177 AHVGSKYPKAH-LYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNI-V--------------Y 240 (407)
Q Consensus 177 ~~l~~~~~~~~-v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~-~--------------~ 240 (407)
+.++.. + +++|||||||++++.+|.++|++ |+++|++++................. + .
T Consensus 118 ~~lgi~----~~~~lvG~S~GG~va~~~a~~~P~~--V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 191 (339)
T PRK07581 118 EKFGIE----RLALVVGWSMGAQQTYHWAVRYPDM--VERAAPIAGTAKTTPHNFVFLEGLKAALTADPAFNGGWYAEPP 191 (339)
T ss_pred HHhCCC----ceEEEEEeCHHHHHHHHHHHHCHHH--HhhheeeecCCCCCHHHHHHHHHHHHHHHhCCCCCCCCCCCcH
Confidence 455544 8 57999999999999999999999 99999997654311110000000000 0 0
Q ss_pred HHHHHHHHHHHHH--HHHhhhhhc-CCCCCHHHHhcCCCHHHHh-hccccccCCCCCHHHH----H-----hh----CCc
Q 015401 241 DKALASALCRIFK--KHALLFEDM-GGEFNIPLAANAKSVRQFD-DGLTRVSFGFKSVDDY----Y-----SN----SSS 303 (407)
Q Consensus 241 ~~~~~~~l~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~-----~~----~~~ 303 (407)
...+......... .....+... ......... ...+.... ....... ....... . .. .+.
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~d~ 267 (339)
T PRK07581 192 ERGLRAHARVYAGWGFSQAFYRQELWRAMGYASL--EDFLVGFWEGNFLPRD--PNNLLAMLWTWQRGDISRNPAYGGDL 267 (339)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHhhhccccChhhH--HHHHHHHHHHhhcccC--cccHHHHHHHhhhcccccCcccCCCH
Confidence 0000000000000 000000000 000000000 00000000 0000000 0001110 0 01 133
Q ss_pred chhcCCCccceeeeecCCCCCCCCCCCChhHHhcCCCeEEEEcCC-CCceeecCCCCCCCCCCCcHHHHHHHHHHHHH
Q 015401 304 SDSIKHVRIPLLCIQAQNDPIAPSRGIPCEDIKANPNCLLILTPK-GGHLGWVAGPEAPFGSPWTDPVVMDFLEHLER 380 (407)
Q Consensus 304 ~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~p~~~~~~~w~~~~i~~fl~~~~~ 380 (407)
...+.+|++|+|+|+|++|.+++++.. +.+.+..|+++++++++ +||+.++++++. +.+.|.+|++++..
T Consensus 268 ~~~L~~I~~PtLvI~G~~D~~~p~~~~-~~l~~~ip~a~l~~i~~~~GH~~~~~~~~~------~~~~~~~~~~~~~~ 338 (339)
T PRK07581 268 AAALGSITAKTFVMPISTDLYFPPEDC-EAEAALIPNAELRPIESIWGHLAGFGQNPA------DIAFIDAALKELLA 338 (339)
T ss_pred HHHHhcCCCCEEEEEeCCCCCCCHHHH-HHHHHhCCCCeEEEeCCCCCccccccCcHH------HHHHHHHHHHHHHh
Confidence 467889999999999999999998765 56678889999999998 899999999998 99999999998753
No 36
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.92 E-value=1.8e-25 Score=180.14 Aligned_cols=227 Identities=18% Similarity=0.240 Sum_probs=153.4
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEE
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAV 191 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lv 191 (407)
++..|+++||++|++.+ ++.+.+.|.++||.|.++.+||||..+...-..+..+|.+|+.+..++|... +...|.++
T Consensus 14 G~~AVLllHGFTGt~~D--vr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~-gy~eI~v~ 90 (243)
T COG1647 14 GNRAVLLLHGFTGTPRD--VRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEA-GYDEIAVV 90 (243)
T ss_pred CCEEEEEEeccCCCcHH--HHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHc-CCCeEEEE
Confidence 44789999999998865 7899999999999999999999998764444566788999999999999954 34489999
Q ss_pred EechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHH
Q 015401 192 GWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNIVYDKALASALCRIFKKHALLFEDMGGEFNIPLA 271 (407)
Q Consensus 192 G~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 271 (407)
|.||||.+++.+|..+| ++++|.+|+|.........+. .+..++...... +. .+.+..
T Consensus 91 GlSmGGv~alkla~~~p----~K~iv~m~a~~~~k~~~~iie-------------~~l~y~~~~kk~-e~----k~~e~~ 148 (243)
T COG1647 91 GLSMGGVFALKLAYHYP----PKKIVPMCAPVNVKSWRIIIE-------------GLLEYFRNAKKY-EG----KDQEQI 148 (243)
T ss_pred eecchhHHHHHHHhhCC----ccceeeecCCcccccchhhhH-------------HHHHHHHHhhhc-cC----CCHHHH
Confidence 99999999999999998 789999999885433221111 111111111100 00 000000
Q ss_pred hcCCCHHHHhhccccccCCCCCHHHHHh-hCCcchhcCCCccceeeeecCCCCCCCCCCCChhHH-hcCCCeEEEEcCCC
Q 015401 272 ANAKSVRQFDDGLTRVSFGFKSVDDYYS-NSSSSDSIKHVRIPLLCIQAQNDPIAPSRGIPCEDI-KANPNCLLILTPKG 349 (407)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 349 (407)
.+.+..+.+... .....++. ..+....+..|..|++++.|.+|+.+|.+++...+. ......++.++++.
T Consensus 149 --~~e~~~~~~~~~------~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~S 220 (243)
T COG1647 149 --DKEMKSYKDTPM------TTTAQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGS 220 (243)
T ss_pred --HHHHHHhhcchH------HHHHHHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccC
Confidence 000111111000 01111111 112346678899999999999999999987643332 23457899999999
Q ss_pred CceeecCCCCCCCCCCCcHHHHHHHHH
Q 015401 350 GHLGWVAGPEAPFGSPWTDPVVMDFLE 376 (407)
Q Consensus 350 gH~~~~~~p~~~~~~~w~~~~i~~fl~ 376 (407)
||..-.+...+. +.+.|..||+
T Consensus 221 gHVIt~D~Erd~-----v~e~V~~FL~ 242 (243)
T COG1647 221 GHVITLDKERDQ-----VEEDVITFLE 242 (243)
T ss_pred CceeecchhHHH-----HHHHHHHHhh
Confidence 999777655432 8888999986
No 37
>PRK13604 luxD acyl transferase; Provisional
Probab=99.92 E-value=3.2e-23 Score=181.32 Aligned_cols=252 Identities=15% Similarity=0.132 Sum_probs=161.6
Q ss_pred ccEEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCC-CCCCCCCCC
Q 015401 84 LKRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGC-GDSPVTTPQ 162 (407)
Q Consensus 84 ~~r~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~-G~S~~~~~~ 162 (407)
.....+.+.||..+...|..|++ ..+...++||++||+++.. .++..++..|.++||.|+.+|+||+ |.|++....
T Consensus 9 ~~~~~~~~~dG~~L~Gwl~~P~~-~~~~~~~~vIi~HGf~~~~--~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~ 85 (307)
T PRK13604 9 TIDHVICLENGQSIRVWETLPKE-NSPKKNNTILIASGFARRM--DHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDE 85 (307)
T ss_pred chhheEEcCCCCEEEEEEEcCcc-cCCCCCCEEEEeCCCCCCh--HHHHHHHHHHHHCCCEEEEecCCCCCCCCCCcccc
Confidence 34567899999999998888753 2244668999999998754 3357889999999999999999988 899776555
Q ss_pred cccCCChhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchhHHHHH
Q 015401 163 FYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNIVYDK 242 (407)
Q Consensus 163 ~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~~~~~ 242 (407)
.+.....+|+.+++++++.+. ..++.++||||||.+++..|++. . ++++|+.++..++......
T Consensus 86 ~t~s~g~~Dl~aaid~lk~~~-~~~I~LiG~SmGgava~~~A~~~--~--v~~lI~~sp~~~l~d~l~~----------- 149 (307)
T PRK13604 86 FTMSIGKNSLLTVVDWLNTRG-INNLGLIAASLSARIAYEVINEI--D--LSFLITAVGVVNLRDTLER----------- 149 (307)
T ss_pred CcccccHHHHHHHHHHHHhcC-CCceEEEEECHHHHHHHHHhcCC--C--CCEEEEcCCcccHHHHHHH-----------
Confidence 555566899999999998864 45899999999999987776643 2 7888888876653311110
Q ss_pred HHHHHHHHHHHHHHhhhhhcCCCCCHHHHhcCCCHHHHhhccccccCCCCCHHHHHhhCCcchhcCCCccceeeeecCCC
Q 015401 243 ALASALCRIFKKHALLFEDMGGEFNIPLAANAKSVRQFDDGLTRVSFGFKSVDDYYSNSSSSDSIKHVRIPLLCIQAQND 322 (407)
Q Consensus 243 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D 322 (407)
.+...+... . ....+...+... .......|.+..... .++...+..+.++++++|+|+|||.+|
T Consensus 150 ----~~~~~~~~~-p-~~~lp~~~d~~g--~~l~~~~f~~~~~~~--------~~~~~~s~i~~~~~l~~PvLiIHG~~D 213 (307)
T PRK13604 150 ----ALGYDYLSL-P-IDELPEDLDFEG--HNLGSEVFVTDCFKH--------GWDTLDSTINKMKGLDIPFIAFTANND 213 (307)
T ss_pred ----hhhcccccC-c-cccccccccccc--ccccHHHHHHHHHhc--------CccccccHHHHHhhcCCCEEEEEcCCC
Confidence 000000000 0 000000000000 000001111100000 000112233567778899999999999
Q ss_pred CCCCCCCCChhHHhc-CCCeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHHHHHh
Q 015401 323 PIAPSRGIPCEDIKA-NPNCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEHLERA 381 (407)
Q Consensus 323 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~~~~~ 381 (407)
.+||.+.+.+...+. ..+++++++++++|. +.+++ -.+.+|.+.+...
T Consensus 214 ~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~-l~~~~----------~~~~~~~~~~~~~ 262 (307)
T PRK13604 214 SWVKQSEVIDLLDSIRSEQCKLYSLIGSSHD-LGENL----------VVLRNFYQSVTKA 262 (307)
T ss_pred CccCHHHHHHHHHHhccCCcEEEEeCCCccc-cCcch----------HHHHHHHHHHHHH
Confidence 999998774333323 358999999999996 44443 4577888877653
No 38
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.92 E-value=2.6e-25 Score=204.92 Aligned_cols=251 Identities=13% Similarity=0.165 Sum_probs=141.1
Q ss_pred EEEEeCCCCCCCcc----------HHHHHHHH---HHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHh
Q 015401 115 VLILMPGLTGGSED----------SYVRHMLL---RARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGS 181 (407)
Q Consensus 115 ~vv~lHG~~g~~~~----------~~~~~~~~---~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~ 181 (407)
++||+||+.+++.. .|+..++. .|..++|+||++|+||||.|.. ..++..++++|+.++++.++.
T Consensus 59 p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~--~~~~~~~~a~dl~~ll~~l~l 136 (343)
T PRK08775 59 PVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLD--VPIDTADQADAIALLLDALGI 136 (343)
T ss_pred CEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCC--CCCCHHHHHHHHHHHHHHcCC
Confidence 46666665554431 04444553 3445689999999999998852 335567789999999998876
Q ss_pred hCCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchhHHH----------HH-HHHHHHH-
Q 015401 182 KYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNIVY----------DK-ALASALC- 249 (407)
Q Consensus 182 ~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~~~----------~~-~~~~~l~- 249 (407)
. +.++++||||||++++.+|.++|++ |.++|++++..........+........ .. .....+.
T Consensus 137 ~---~~~~lvG~SmGG~vA~~~A~~~P~~--V~~LvLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (343)
T PRK08775 137 A---RLHAFVGYSYGALVGLQFASRHPAR--VRTLVVVSGAHRAHPYAAAWRALQRRAVALGQLQCAEKHGLALARQLAM 211 (343)
T ss_pred C---cceEEEEECHHHHHHHHHHHHChHh--hheEEEECccccCCHHHHHHHHHHHHHHHcCCCCCCchhHHHHHHHHHH
Confidence 4 1357999999999999999999999 9999999875432111100100000000 00 0000000
Q ss_pred HHHHHHHhhhhhcCCCCCHHHHhcCCCHHHHhhccccccCCCCCHHHHH---hhCC-cchhcCCCccceeeeecCCCCCC
Q 015401 250 RIFKKHALLFEDMGGEFNIPLAANAKSVRQFDDGLTRVSFGFKSVDDYY---SNSS-SSDSIKHVRIPLLCIQAQNDPIA 325 (407)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~l~~i~~Pvlii~g~~D~~~ 325 (407)
...........................+..+................+. ...+ ....+.+|++|+|+|+|++|.++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~~PtLvi~G~~D~~~ 291 (343)
T PRK08775 212 LSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESIDLHRVDPEAIRVPTVVVAVEGDRLV 291 (343)
T ss_pred HHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHHhhcCCChhcCCCCeEEEEeCCCEee
Confidence 0000000000000000000000000000101000000000000001111 1111 12246789999999999999999
Q ss_pred CCCCCChhHHhcC-CCeEEEEcCC-CCceeecCCCCCCCCCCCcHHHHHHHHHHHH
Q 015401 326 PSRGIPCEDIKAN-PNCLLILTPK-GGHLGWVAGPEAPFGSPWTDPVVMDFLEHLE 379 (407)
Q Consensus 326 ~~~~~~~~~~~~~-~~~~~~~~~~-~gH~~~~~~p~~~~~~~w~~~~i~~fl~~~~ 379 (407)
|++.. +.+.+.. |+++++++++ +||.+++|+|+. +++.|.+||++..
T Consensus 292 p~~~~-~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~------~~~~l~~FL~~~~ 340 (343)
T PRK08775 292 PLADL-VELAEGLGPRGSLRVLRSPYGHDAFLKETDR------IDAILTTALRSTG 340 (343)
T ss_pred CHHHH-HHHHHHcCCCCeEEEEeCCccHHHHhcCHHH------HHHHHHHHHHhcc
Confidence 97755 4555555 7999999985 999999999998 9999999997653
No 39
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.92 E-value=4.7e-25 Score=198.63 Aligned_cols=272 Identities=19% Similarity=0.214 Sum_probs=155.4
Q ss_pred cEEEEEcCCCC-EEEEEeecCCC---CCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHHhC-CcEEEEEeCCCCCCC-CC
Q 015401 85 KRECIRTKDDG-SVALDWISGDH---QLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSK-GWRVVVFNSRGCGDS-PV 158 (407)
Q Consensus 85 ~r~~~~~~dg~-~~~~~~~~~~~---~~~~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~-g~~vi~~D~rG~G~S-~~ 158 (407)
....+..+.|. .+...|..... .....++++||++|||+++.. .| ...+..+.+. |++|+++|++|+|.+ ..
T Consensus 26 ~~~~i~~~~g~~~~~~~w~~~~~~~~~~~~~~~~pvlllHGF~~~~~-~w-~~~~~~L~~~~~~~v~aiDl~G~g~~s~~ 103 (326)
T KOG1454|consen 26 RSTSIEIPWGPLTIRSKWIPNLDKYGSPGDKDKPPVLLLHGFGASSF-SW-RRVVPLLSKAKGLRVLAIDLPGHGYSSPL 103 (326)
T ss_pred cceEEEcccCCceeEEEEeccceeccCCCCCCCCcEEEeccccCCcc-cH-hhhccccccccceEEEEEecCCCCcCCCC
Confidence 44455555554 56666765441 011147899999999988554 44 5666555443 599999999999954 33
Q ss_pred CCCC-cccCCChhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCCCCceeEE---EEcCCCCHHHHHHHHhc
Q 015401 159 TTPQ-FYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAV---SLCNPFNLVIADQDFRK 234 (407)
Q Consensus 159 ~~~~-~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v---~l~~p~~~~~~~~~~~~ 234 (407)
+... ++...+++ .+..+...+...+++++|||+||.+|+.+|+.+|+. |++++ +++++..........
T Consensus 104 ~~~~~y~~~~~v~----~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~~--V~~lv~~~~~~~~~~~~~~~~~~-- 175 (326)
T KOG1454|consen 104 PRGPLYTLRELVE----LIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYPET--VDSLVLLDLLGPPVYSTPKGIKG-- 175 (326)
T ss_pred CCCCceehhHHHH----HHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCccc--ccceeeecccccccccCCcchhH--
Confidence 3322 34334444 444444444444899999999999999999999999 99999 666655321111000
Q ss_pred chhHHHHHHHHHHHHHHHHHH-------Hh-hhhhcCCCCCHHHHhcCCCHHHHhhcccccc--CCC----CCHHHHHh-
Q 015401 235 GFNIVYDKALASALCRIFKKH-------AL-LFEDMGGEFNIPLAANAKSVRQFDDGLTRVS--FGF----KSVDDYYS- 299 (407)
Q Consensus 235 ~~~~~~~~~~~~~l~~~~~~~-------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~- 299 (407)
....+...+...-... .. ......................+......+. ... -....+..
T Consensus 176 -----~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (326)
T KOG1454|consen 176 -----LRRLLDKFLSALELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLG 250 (326)
T ss_pred -----HHHhhhhhccHhhhcCccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccC
Confidence 0000000000000000 00 0000000000000000011111111111110 000 00000000
Q ss_pred -hCCcchhcCCCc-cceeeeecCCCCCCCCCCCChhHHhcCCCeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHH
Q 015401 300 -NSSSSDSIKHVR-IPLLCIQAQNDPIAPSRGIPCEDIKANPNCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEH 377 (407)
Q Consensus 300 -~~~~~~~l~~i~-~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~ 377 (407)
.......+++|. +|+++++|++|+++|.+.. +.+.+.+|++++++++++||.+++|.|+. +++.|..|+..
T Consensus 251 ~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~-~~~~~~~pn~~~~~I~~~gH~~h~e~Pe~------~~~~i~~Fi~~ 323 (326)
T KOG1454|consen 251 FDENLLSLIKKIWKCPVLIIWGDKDQIVPLELA-EELKKKLPNAELVEIPGAGHLPHLERPEE------VAALLRSFIAR 323 (326)
T ss_pred ccchHHHhhccccCCceEEEEcCcCCccCHHHH-HHHHhhCCCceEEEeCCCCcccccCCHHH------HHHHHHHHHHH
Confidence 112234567777 9999999999999999855 57777789999999999999999999999 99999999987
Q ss_pred H
Q 015401 378 L 378 (407)
Q Consensus 378 ~ 378 (407)
.
T Consensus 324 ~ 324 (326)
T KOG1454|consen 324 L 324 (326)
T ss_pred h
Confidence 5
No 40
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.91 E-value=1.4e-24 Score=202.21 Aligned_cols=256 Identities=15% Similarity=0.162 Sum_probs=149.1
Q ss_pred CCcEEEEeCCCCCCCccH-----------HHHHHH---HHHHhCCcEEEEEeCCC-CCCCCCCC--------------CC
Q 015401 112 DSPVLILMPGLTGGSEDS-----------YVRHML---LRARSKGWRVVVFNSRG-CGDSPVTT--------------PQ 162 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~-----------~~~~~~---~~l~~~g~~vi~~D~rG-~G~S~~~~--------------~~ 162 (407)
++|+|||+||++++.... |+..++ ..+...+|+||++|++| +|+|+.+. +.
T Consensus 47 ~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~ 126 (379)
T PRK00175 47 RSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPV 126 (379)
T ss_pred CCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCc
Confidence 468999999998876521 234443 24557799999999998 35554321 14
Q ss_pred cccCCChhHHHHHHHHHHhhCCCCc-EEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcc-hh---
Q 015401 163 FYSASFLGDMQEVVAHVGSKYPKAH-LYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKG-FN--- 237 (407)
Q Consensus 163 ~~~~~~~~Dl~~~l~~l~~~~~~~~-v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~-~~--- 237 (407)
++...+++|+.+++++++.. + ++++||||||.+++.+|.++|++ |+++|++++..........+... ..
T Consensus 127 ~~~~~~~~~~~~~l~~l~~~----~~~~lvG~S~Gg~ia~~~a~~~p~~--v~~lvl~~~~~~~~~~~~~~~~~~~~~i~ 200 (379)
T PRK00175 127 ITIRDWVRAQARLLDALGIT----RLAAVVGGSMGGMQALEWAIDYPDR--VRSALVIASSARLSAQNIAFNEVARQAIL 200 (379)
T ss_pred CCHHHHHHHHHHHHHHhCCC----CceEEEEECHHHHHHHHHHHhChHh--hhEEEEECCCcccCHHHHHHHHHHHHHHH
Confidence 56678888999999988876 7 58999999999999999999999 99999998754321111000000 00
Q ss_pred ----------------HHHHHHHHHHHHH-HHHHHHhhhhhcCCCCCHHH----HhcCCCHHHHhh----cccccc--CC
Q 015401 238 ----------------IVYDKALASALCR-IFKKHALLFEDMGGEFNIPL----AANAKSVRQFDD----GLTRVS--FG 290 (407)
Q Consensus 238 ----------------~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~----~~~~~~--~~ 290 (407)
............. ...........+........ .........+.. ...... ..
T Consensus 201 ~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~ 280 (379)
T PRK00175 201 ADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQGDKFVERFDANS 280 (379)
T ss_pred hCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHHHHHHhhccCchH
Confidence 0000000000000 00000000000000000000 000000011100 000000 00
Q ss_pred CCCHHHHHhh--------CCcchhcCCCccceeeeecCCCCCCCCCCCChhHHhcCCCe----EEEEcC-CCCceeecCC
Q 015401 291 FKSVDDYYSN--------SSSSDSIKHVRIPLLCIQAQNDPIAPSRGIPCEDIKANPNC----LLILTP-KGGHLGWVAG 357 (407)
Q Consensus 291 ~~~~~~~~~~--------~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~----~~~~~~-~~gH~~~~~~ 357 (407)
+......+.. .+....+.+|++|+|+|+|++|.++|++.. +.+.+..++. ++++++ ++||++++++
T Consensus 281 ~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~-~~la~~i~~a~~~~~l~~i~~~~GH~~~le~ 359 (379)
T PRK00175 281 YLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARS-REIVDALLAAGADVSYAEIDSPYGHDAFLLD 359 (379)
T ss_pred HHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHH-HHHHHHHHhcCCCeEEEEeCCCCCchhHhcC
Confidence 0000011111 123567899999999999999999998865 5667777765 777775 8999999999
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHH
Q 015401 358 PEAPFGSPWTDPVVMDFLEHLER 380 (407)
Q Consensus 358 p~~~~~~~w~~~~i~~fl~~~~~ 380 (407)
|++ +++.|.+||++...
T Consensus 360 p~~------~~~~L~~FL~~~~~ 376 (379)
T PRK00175 360 DPR------YGRLVRAFLERAAR 376 (379)
T ss_pred HHH------HHHHHHHHHHhhhh
Confidence 998 99999999988654
No 41
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.91 E-value=2.5e-24 Score=189.35 Aligned_cols=243 Identities=17% Similarity=0.253 Sum_probs=138.1
Q ss_pred CcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEEE
Q 015401 113 SPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVG 192 (407)
Q Consensus 113 ~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG 192 (407)
+|+||++||++++.. .| ..++..|. +||+|+++|+||+|.|+.+.. ....++.+.+.+++..+....+..+++++|
T Consensus 1 ~~~vv~~hG~~~~~~-~~-~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 76 (251)
T TIGR03695 1 KPVLVFLHGFLGSGA-DW-QALIELLG-PHFRCLAIDLPGHGSSQSPDE-IERYDFEEAAQDILATLLDQLGIEPFFLVG 76 (251)
T ss_pred CCEEEEEcCCCCchh-hH-HHHHHHhc-ccCeEEEEcCCCCCCCCCCCc-cChhhHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 478999999987664 44 66666665 899999999999999975422 111222222223244444444455999999
Q ss_pred echhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcch-hHHHHHHHHHH-HHHHHHHHHhhhhhcCCCCCHHH
Q 015401 193 WSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGF-NIVYDKALASA-LCRIFKKHALLFEDMGGEFNIPL 270 (407)
Q Consensus 193 ~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~-~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~ 270 (407)
||+||.+++.+|.++|+. |.+++++++............... .......+... .......... ............
T Consensus 77 ~S~Gg~ia~~~a~~~~~~--v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 153 (251)
T TIGR03695 77 YSMGGRIALYYALQYPER--VQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQ-QPLFASQKNLPP 153 (251)
T ss_pred eccHHHHHHHHHHhCchh--eeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhc-CceeeecccCCh
Confidence 999999999999999998 999999887543221111100000 00000000000 0000000000 000000000000
Q ss_pred HhcCCCHHHHhhccccccCCCCCHHHHHh------hCCcchhcCCCccceeeeecCCCCCCCCCCCChhHHhcCCCeEEE
Q 015401 271 AANAKSVRQFDDGLTRVSFGFKSVDDYYS------NSSSSDSIKHVRIPLLCIQAQNDPIAPSRGIPCEDIKANPNCLLI 344 (407)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~ 344 (407)
.....+....... .......++. ..+....+.++++|+++++|++|..++ +.. +.+.+..++++++
T Consensus 154 ----~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~-~~~~~~~~~~~~~ 225 (251)
T TIGR03695 154 ----EQRQALRAKRLAN--NPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIA-KEMQKLLPNLTLV 225 (251)
T ss_pred ----HHhHHHHHhcccc--cchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHH-HHHHhcCCCCcEE
Confidence 0000000000000 0000111111 112234567899999999999998764 222 4667778999999
Q ss_pred EcCCCCceeecCCCCCCCCCCCcHHHHHHHHH
Q 015401 345 LTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLE 376 (407)
Q Consensus 345 ~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~ 376 (407)
+++++||+.++++|+. +.+.|.+|++
T Consensus 226 ~~~~~gH~~~~e~~~~------~~~~i~~~l~ 251 (251)
T TIGR03695 226 IIANAGHNIHLENPEA------FAKILLAFLE 251 (251)
T ss_pred EEcCCCCCcCccChHH------HHHHHHHHhC
Confidence 9999999999999988 8999999973
No 42
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.91 E-value=1.6e-22 Score=189.04 Aligned_cols=255 Identities=14% Similarity=0.178 Sum_probs=137.8
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCccc-CC----ChhHHHHHHHHHHhhCCCC
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYS-AS----FLGDMQEVVAHVGSKYPKA 186 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~-~~----~~~Dl~~~l~~l~~~~~~~ 186 (407)
++|+|||+||++++.. .| ...+..+. ++|+|+++|+||||.|+.+...+.. +. +++++.++++.+ ...
T Consensus 104 ~~p~vvllHG~~~~~~-~~-~~~~~~L~-~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l----~~~ 176 (402)
T PLN02894 104 DAPTLVMVHGYGASQG-FF-FRNFDALA-SRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAK----NLS 176 (402)
T ss_pred CCCEEEEECCCCcchh-HH-HHHHHHHH-hCCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHc----CCC
Confidence 6799999999976543 44 34455554 5699999999999999754322111 11 223333333333 334
Q ss_pred cEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHH---HHHhcchhHHHHHHH-------------HHHH--
Q 015401 187 HLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIAD---QDFRKGFNIVYDKAL-------------ASAL-- 248 (407)
Q Consensus 187 ~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~---~~~~~~~~~~~~~~~-------------~~~l-- 248 (407)
+++++||||||.+++.+|.++|++ |+++|++++........ ..+...........+ ....
T Consensus 177 ~~~lvGhS~GG~la~~~a~~~p~~--v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gp 254 (402)
T PLN02894 177 NFILLGHSFGGYVAAKYALKHPEH--VQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRGLGP 254 (402)
T ss_pred CeEEEEECHHHHHHHHHHHhCchh--hcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhccc
Confidence 899999999999999999999998 99999987643111100 000000000000000 0000
Q ss_pred --HHHHHHHH-hhhhhcCCCCCHHHHhcCCCHHHHh-hccccccCC-----CCCHHHHHhhCCcchhcCCCccceeeeec
Q 015401 249 --CRIFKKHA-LLFEDMGGEFNIPLAANAKSVRQFD-DGLTRVSFG-----FKSVDDYYSNSSSSDSIKHVRIPLLCIQA 319 (407)
Q Consensus 249 --~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~i~~Pvlii~g 319 (407)
..+..... ..+.......... ......+.++. ........+ +......+...+....+.+|++|+++|+|
T Consensus 255 ~~~~l~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~liI~G 333 (402)
T PLN02894 255 WGPNLVRRYTTARFGAHSTGDILS-EEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTFIYG 333 (402)
T ss_pred hhHHHHHHHHHHHhhhcccccccC-cchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEEEEe
Confidence 00000000 0000000000000 00000010100 000000000 00000001123344568889999999999
Q ss_pred CCCCCCCCCCCChhHHhcCCCeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHHHHHhcC
Q 015401 320 QNDPIAPSRGIPCEDIKANPNCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEHLERASS 383 (407)
Q Consensus 320 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~~~~~~~ 383 (407)
++|.+.+.. .........+.+++++++++||+.+.|+|+. |++.|.+|++.+.+..+
T Consensus 334 ~~D~i~~~~-~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~------f~~~l~~~~~~~~~~~~ 390 (402)
T PLN02894 334 RHDWMNYEG-AVEARKRMKVPCEIIRVPQGGHFVFLDNPSG------FHSAVLYACRKYLSPDR 390 (402)
T ss_pred CCCCCCcHH-HHHHHHHcCCCCcEEEeCCCCCeeeccCHHH------HHHHHHHHHHHhccCCc
Confidence 999876533 3122223345689999999999999999998 99999999998876543
No 43
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.91 E-value=8.5e-24 Score=193.07 Aligned_cols=269 Identities=16% Similarity=0.244 Sum_probs=154.8
Q ss_pred EEcCCCCEEEEE-eecCCCCCCCCCCcEEEEeCCCCCCCccHHH------------------------HHHHHHHHhCCc
Q 015401 89 IRTKDDGSVALD-WISGDHQLLPPDSPVLILMPGLTGGSEDSYV------------------------RHMLLRARSKGW 143 (407)
Q Consensus 89 ~~~~dg~~~~~~-~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~------------------------~~~~~~l~~~g~ 143 (407)
+...||..+.+. |.+ +. .+.+|+++||+++++...|+ ..++..|.++||
T Consensus 2 ~~~~~g~~l~~~~~~~-~~-----~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~ 75 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIV-KN-----AIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGY 75 (332)
T ss_pred ccCCCCCeEEEeeeec-cC-----CeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCC
Confidence 456688877655 443 32 67899999999887753333 346788899999
Q ss_pred EEEEEeCCCCCCCCCCCC-C---cccCCChhHHHHHHHHHHh-------------------hCC-CCcEEEEEechhHHH
Q 015401 144 RVVVFNSRGCGDSPVTTP-Q---FYSASFLGDMQEVVAHVGS-------------------KYP-KAHLYAVGWSLGANI 199 (407)
Q Consensus 144 ~vi~~D~rG~G~S~~~~~-~---~~~~~~~~Dl~~~l~~l~~-------------------~~~-~~~v~lvG~S~Gg~i 199 (407)
+|+++|+||||.|..... . ..+..+++|+..+++.++. .++ +.+++++||||||.+
T Consensus 76 ~V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i 155 (332)
T TIGR01607 76 SVYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNI 155 (332)
T ss_pred cEEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHH
Confidence 999999999999975422 1 2345678889999988765 355 669999999999999
Q ss_pred HHHHHhccCCC------CCceeEEEEcCCCCHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHhc
Q 015401 200 LIRYLGHESHS------CPLSGAVSLCNPFNLVIADQDFRKGFNIVYDKALASALCRIFKKHALLFEDMGGEFNIPLAAN 273 (407)
Q Consensus 200 a~~~a~~~p~~------~~v~~~v~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (407)
++.++.++++. ..++++|++++++.+..........+... ...+...+........ ... ...+..+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~-~~~l~~~~~~~~p~~~--~~~-~~~~~~~~~-- 229 (332)
T TIGR01607 156 ALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYF-YLPVMNFMSRVFPTFR--ISK-KIRYEKSPY-- 229 (332)
T ss_pred HHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhh-HHHHHHHHHHHCCccc--ccC-ccccccChh--
Confidence 99998765431 13899998888764311000000000000 0111111111100000 000 000000000
Q ss_pred CCCHHHHhhccccccCCCCCHHHHHhhCC-cchhcCCC--ccceeeeecCCCCCCCCCCCChhHHh--cCCCeEEEEcCC
Q 015401 274 AKSVRQFDDGLTRVSFGFKSVDDYYSNSS-SSDSIKHV--RIPLLCIQAQNDPIAPSRGIPCEDIK--ANPNCLLILTPK 348 (407)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~i--~~Pvlii~g~~D~~~~~~~~~~~~~~--~~~~~~~~~~~~ 348 (407)
.......|..............+.+.... ....+..+ ++|+|+|+|++|++++++.. +.+.+ ..+++++.++++
T Consensus 230 ~~~~~~~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~-~~~~~~~~~~~~~l~~~~g 308 (332)
T TIGR01607 230 VNDIIKFDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGT-VSFYNKLSISNKELHTLED 308 (332)
T ss_pred hhhHHhcCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHH-HHHHHhccCCCcEEEEECC
Confidence 00000111111101111111112221111 11234455 69999999999999998765 33332 346889999999
Q ss_pred CCceeecCCC-CCCCCCCCcHHHHHHHHH
Q 015401 349 GGHLGWVAGP-EAPFGSPWTDPVVMDFLE 376 (407)
Q Consensus 349 ~gH~~~~~~p-~~~~~~~w~~~~i~~fl~ 376 (407)
++|..+.|.. ++ +.+.|.+||+
T Consensus 309 ~~H~i~~E~~~~~------v~~~i~~wL~ 331 (332)
T TIGR01607 309 MDHVITIEPGNEE------VLKKIIEWIS 331 (332)
T ss_pred CCCCCccCCCHHH------HHHHHHHHhh
Confidence 9999988753 33 7778888875
No 44
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.91 E-value=1.7e-24 Score=200.19 Aligned_cols=252 Identities=16% Similarity=0.199 Sum_probs=144.8
Q ss_pred CCcEEEEeCCCCCCCccH---------HHHHHH---HHHHhCCcEEEEEeCCC--CCCCCCC------------CCCccc
Q 015401 112 DSPVLILMPGLTGGSEDS---------YVRHML---LRARSKGWRVVVFNSRG--CGDSPVT------------TPQFYS 165 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~---------~~~~~~---~~l~~~g~~vi~~D~rG--~G~S~~~------------~~~~~~ 165 (407)
.+++||++||+++++... |+..++ ..+..++|+|+++|+|| +|.|... .+.++.
T Consensus 30 ~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~ 109 (351)
T TIGR01392 30 RSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITI 109 (351)
T ss_pred CCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcH
Confidence 467999999998866422 334443 25667899999999999 4544321 012455
Q ss_pred CCChhHHHHHHHHHHhhCCCCc-EEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchhH-H----
Q 015401 166 ASFLGDMQEVVAHVGSKYPKAH-LYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNI-V---- 239 (407)
Q Consensus 166 ~~~~~Dl~~~l~~l~~~~~~~~-v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~-~---- 239 (407)
+++++|+.++++.++.. + ++++||||||++++.+|.++|++ |+++|++++..........+...... +
T Consensus 110 ~~~~~~~~~~~~~l~~~----~~~~l~G~S~Gg~ia~~~a~~~p~~--v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (351)
T TIGR01392 110 RDDVKAQKLLLDHLGIE----QIAAVVGGSMGGMQALEWAIDYPER--VRAIVVLATSARHSAWCIAFNEVQRQAILADP 183 (351)
T ss_pred HHHHHHHHHHHHHcCCC----CceEEEEECHHHHHHHHHHHHChHh--hheEEEEccCCcCCHHHHHHHHHHHHHHHhCC
Confidence 67778888888877654 7 99999999999999999999999 99999998865321111000000000 0
Q ss_pred --------------HHHHHHHHHHHHH-HHHHhhhhhcCCCCCHH---HH--hcCCCHHHHhh----ccccc--cCCCCC
Q 015401 240 --------------YDKALASALCRIF-KKHALLFEDMGGEFNIP---LA--ANAKSVRQFDD----GLTRV--SFGFKS 293 (407)
Q Consensus 240 --------------~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~----~~~~~--~~~~~~ 293 (407)
........+.... .........+....... .. ........+.. .+... ...+..
T Consensus 184 ~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 263 (351)
T TIGR01392 184 NWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQGDKFVDRFDANSYLY 263 (351)
T ss_pred CCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHHHHHHHhhcCcchHHH
Confidence 0000000000000 00000000000000000 00 00000011100 00000 000000
Q ss_pred HHHHHhhC-------CcchhcCCCccceeeeecCCCCCCCCCCCChhHHhcCCCeEEE-----EcCCCCceeecCCCCCC
Q 015401 294 VDDYYSNS-------SSSDSIKHVRIPLLCIQAQNDPIAPSRGIPCEDIKANPNCLLI-----LTPKGGHLGWVAGPEAP 361 (407)
Q Consensus 294 ~~~~~~~~-------~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~-----~~~~~gH~~~~~~p~~~ 361 (407)
....+... +..+.+++|++|+|+|+|++|.++|++.. +.+.+..++.++. +++++||.+++++|++
T Consensus 264 ~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~-~~~a~~i~~~~~~v~~~~i~~~~GH~~~le~p~~- 341 (351)
T TIGR01392 264 LTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAES-RELAKALPAAGLRVTYVEIESPYGHDAFLVETDQ- 341 (351)
T ss_pred HHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHH-HHHHHHHhhcCCceEEEEeCCCCCcchhhcCHHH-
Confidence 01111111 23467889999999999999999998865 5677778887665 5678999999999998
Q ss_pred CCCCCcHHHHHHHHH
Q 015401 362 FGSPWTDPVVMDFLE 376 (407)
Q Consensus 362 ~~~~w~~~~i~~fl~ 376 (407)
+++.|.+||+
T Consensus 342 -----~~~~l~~FL~ 351 (351)
T TIGR01392 342 -----VEELIRGFLR 351 (351)
T ss_pred -----HHHHHHHHhC
Confidence 9999999974
No 45
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.90 E-value=7.3e-23 Score=185.81 Aligned_cols=124 Identities=19% Similarity=0.351 Sum_probs=89.7
Q ss_pred cEEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCC--C
Q 015401 85 KRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTP--Q 162 (407)
Q Consensus 85 ~r~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~--~ 162 (407)
...++...||..+.+.-. +. +++++|||+||+.++... ......+...+|+|+++|+||||.|+.... .
T Consensus 5 ~~~~~~~~~~~~l~y~~~-g~-----~~~~~lvllHG~~~~~~~---~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~ 75 (306)
T TIGR01249 5 VSGYLNVSDNHQLYYEQS-GN-----PDGKPVVFLHGGPGSGTD---PGCRRFFDPETYRIVLFDQRGCGKSTPHACLEE 75 (306)
T ss_pred cCCeEEcCCCcEEEEEEC-cC-----CCCCEEEEECCCCCCCCC---HHHHhccCccCCEEEEECCCCCCCCCCCCCccc
Confidence 456788888877765432 22 146789999998776542 223333445789999999999999975432 2
Q ss_pred cccCCChhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCC
Q 015401 163 FYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (407)
Q Consensus 163 ~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~ 223 (407)
.+..++++|+..++++++.. +++++||||||.+++.++.++|++ |+++|++++..
T Consensus 76 ~~~~~~~~dl~~l~~~l~~~----~~~lvG~S~GG~ia~~~a~~~p~~--v~~lvl~~~~~ 130 (306)
T TIGR01249 76 NTTWDLVADIEKLREKLGIK----NWLVFGGSWGSTLALAYAQTHPEV--VTGLVLRGIFL 130 (306)
T ss_pred CCHHHHHHHHHHHHHHcCCC----CEEEEEECHHHHHHHHHHHHChHh--hhhheeecccc
Confidence 23344566666666666543 899999999999999999999998 99999987644
No 46
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.90 E-value=1.6e-22 Score=189.10 Aligned_cols=243 Identities=16% Similarity=0.154 Sum_probs=151.2
Q ss_pred CccEEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCC
Q 015401 83 KLKRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQ 162 (407)
Q Consensus 83 ~~~r~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~ 162 (407)
..++..+...||..+...+..+.. ..+.|+||++||+.+... .++..++..+.++||.|+++|+||+|.|.....
T Consensus 167 ~~e~v~i~~~~g~~l~g~l~~P~~---~~~~P~Vli~gG~~~~~~-~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~- 241 (414)
T PRK05077 167 ELKELEFPIPGGGPITGFLHLPKG---DGPFPTVLVCGGLDSLQT-DYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKL- 241 (414)
T ss_pred ceEEEEEEcCCCcEEEEEEEECCC---CCCccEEEEeCCcccchh-hhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCc-
Confidence 456677777788677766554432 235688888778754333 333567778889999999999999999864211
Q ss_pred cccCCChhHHHHHHHHHHhhC--CCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchhHHH
Q 015401 163 FYSASFLGDMQEVVAHVGSKY--PKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNIVY 240 (407)
Q Consensus 163 ~~~~~~~~Dl~~~l~~l~~~~--~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~~~ 240 (407)
..+......++++++.... ...+++++||||||++++.+|..+|++ |+++|+++++++...............+
T Consensus 242 --~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~r--i~a~V~~~~~~~~~~~~~~~~~~~p~~~ 317 (414)
T PRK05077 242 --TQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPR--LKAVACLGPVVHTLLTDPKRQQQVPEMY 317 (414)
T ss_pred --cccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcC--ceEEEEECCccchhhcchhhhhhchHHH
Confidence 1122233356777776542 345899999999999999999999988 9999999987642111110000000000
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHhcCCCHHHHhhccccccCCCCCHHHHHhhCCcchh-cCCCccceeeeec
Q 015401 241 DKALASALCRIFKKHALLFEDMGGEFNIPLAANAKSVRQFDDGLTRVSFGFKSVDDYYSNSSSSDS-IKHVRIPLLCIQA 319 (407)
Q Consensus 241 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~i~~Pvlii~g 319 (407)
...+.. .+ ... ..+ ...+...+.. +... .... ..++++|+|+|+|
T Consensus 318 --------~~~la~---~l-g~~-~~~---------~~~l~~~l~~--~sl~----------~~~~l~~~i~~PvLiI~G 363 (414)
T PRK05077 318 --------LDVLAS---RL-GMH-DAS---------DEALRVELNR--YSLK----------VQGLLGRRCPTPMLSGYW 363 (414)
T ss_pred --------HHHHHH---Hh-CCC-CCC---------hHHHHHHhhh--ccch----------hhhhhccCCCCcEEEEec
Confidence 000000 00 000 000 0011100000 0000 0011 1578999999999
Q ss_pred CCCCCCCCCCCChhHHhcCCCeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHHH
Q 015401 320 QNDPIAPSRGIPCEDIKANPNCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEHL 378 (407)
Q Consensus 320 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~~ 378 (407)
++|+++|++.. +.+.+..++.++++++++ ++++.++. +.+.+.+||++.
T Consensus 364 ~~D~ivP~~~a-~~l~~~~~~~~l~~i~~~---~~~e~~~~------~~~~i~~wL~~~ 412 (414)
T PRK05077 364 KNDPFSPEEDS-RLIASSSADGKLLEIPFK---PVYRNFDK------ALQEISDWLEDR 412 (414)
T ss_pred CCCCCCCHHHH-HHHHHhCCCCeEEEccCC---CccCCHHH------HHHHHHHHHHHH
Confidence 99999999876 466777899999999976 35667776 889999999765
No 47
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.90 E-value=3.1e-23 Score=184.47 Aligned_cols=244 Identities=12% Similarity=0.149 Sum_probs=139.8
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCC-CcccCCChhHHHHHHHHHHhhCCCCcEEE
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTP-QFYSASFLGDMQEVVAHVGSKYPKAHLYA 190 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~-~~~~~~~~~Dl~~~l~~l~~~~~~~~v~l 190 (407)
++|+|||+||++++.. .| ..+...|.++||+|+++|+||||.|..... ..+.+.+++++.++++.+.. ..++++
T Consensus 17 ~~p~vvliHG~~~~~~-~w-~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l~~---~~~v~l 91 (273)
T PLN02211 17 QPPHFVLIHGISGGSW-CW-YKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSLPE---NEKVIL 91 (273)
T ss_pred CCCeEEEECCCCCCcC-cH-HHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhcCC---CCCEEE
Confidence 6789999999987665 44 667777777899999999999998753322 24556666677666666532 248999
Q ss_pred EEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHH--HHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCH
Q 015401 191 VGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLV--IADQDFRKGFNIVYDKALASALCRIFKKHALLFEDMGGEFNI 268 (407)
Q Consensus 191 vG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 268 (407)
+||||||.++..++..+|++ |+++|++++..... .....+..++..... ....+...... .............
T Consensus 92 vGhS~GG~v~~~~a~~~p~~--v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~ 166 (273)
T PLN02211 92 VGHSAGGLSVTQAIHRFPKK--ICLAVYVAATMLKLGFQTDEDMKDGVPDLSE--FGDVYELGFGL-GPDQPPTSAIIKK 166 (273)
T ss_pred EEECchHHHHHHHHHhChhh--eeEEEEeccccCCCCCCHHHHHhccccchhh--hccceeeeecc-CCCCCCceeeeCH
Confidence 99999999999999999998 99999997632100 000000001000000 00000000000 0000000000000
Q ss_pred HHH----hcCCCH--HHHhhccccccCCCCCHHHHHhhCCcchhcCCC-ccceeeeecCCCCCCCCCCCChhHHhcCCCe
Q 015401 269 PLA----ANAKSV--RQFDDGLTRVSFGFKSVDDYYSNSSSSDSIKHV-RIPLLCIQAQNDPIAPSRGIPCEDIKANPNC 341 (407)
Q Consensus 269 ~~~----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~ 341 (407)
... ...... ..+......+. .. ..+...+.......+ ++|+++|.|++|.++|++.. +.+.+..+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~-~~m~~~~~~~ 240 (273)
T PLN02211 167 EFRRKILYQMSPQEDSTLAAMLLRPG-PI----LALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQ-EAMIKRWPPS 240 (273)
T ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCc-Cc----cccccccccccccccCccceEEEEeCCCCCCCHHHH-HHHHHhCCcc
Confidence 000 000000 00000000000 00 000111111223345 78999999999999998855 6777778888
Q ss_pred EEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHHH
Q 015401 342 LLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEHL 378 (407)
Q Consensus 342 ~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~~ 378 (407)
+++.++ +||.++++.|++ +.+.|.++....
T Consensus 241 ~~~~l~-~gH~p~ls~P~~------~~~~i~~~a~~~ 270 (273)
T PLN02211 241 QVYELE-SDHSPFFSTPFL------LFGLLIKAAASV 270 (273)
T ss_pred EEEEEC-CCCCccccCHHH------HHHHHHHHHHHh
Confidence 999996 899999999988 777777765543
No 48
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.89 E-value=6.7e-23 Score=191.79 Aligned_cols=234 Identities=16% Similarity=0.230 Sum_probs=138.7
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEE
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAV 191 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lv 191 (407)
++++|||+||++++.. .| ..+...+ ..+|+|+++|+||||.|.......+.+.+++++.++++.+.. .+++++
T Consensus 130 ~~~~vl~~HG~~~~~~-~~-~~~~~~l-~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~lv 202 (371)
T PRK14875 130 DGTPVVLIHGFGGDLN-NW-LFNHAAL-AAGRPVIALDLPGHGASSKAVGAGSLDELAAAVLAFLDALGI----ERAHLV 202 (371)
T ss_pred CCCeEEEECCCCCccc-hH-HHHHHHH-hcCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCC----ccEEEE
Confidence 5789999999977664 44 4555555 456999999999999996544444555556666666655543 389999
Q ss_pred EechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchhHH-HHHHHHHHHHHHHHHHHhhhhhcCCCCCHHH
Q 015401 192 GWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNIV-YDKALASALCRIFKKHALLFEDMGGEFNIPL 270 (407)
Q Consensus 192 G~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 270 (407)
|||+||.+++.+|.++|++ +.++|+++++.........+...+... ....+...+...... ........
T Consensus 203 G~S~Gg~~a~~~a~~~~~~--v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 272 (371)
T PRK14875 203 GHSMGGAVALRLAARAPQR--VASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLELLFAD--------PALVTRQM 272 (371)
T ss_pred eechHHHHHHHHHHhCchh--eeEEEEECcCCcCcccchhHHHHhhcccchhHHHHHHHHHhcC--------hhhCCHHH
Confidence 9999999999999999988 999999987532111111111100000 000000111000000 00000000
Q ss_pred H------hcCCCHHHHhhccccccCCCCCHHHHHhhCCcchhcCCCccceeeeecCCCCCCCCCCCChhHHhcCCCeEEE
Q 015401 271 A------ANAKSVRQFDDGLTRVSFGFKSVDDYYSNSSSSDSIKHVRIPLLCIQAQNDPIAPSRGIPCEDIKANPNCLLI 344 (407)
Q Consensus 271 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~ 344 (407)
. ............+.... +.. .....+....+.++++|+++++|++|.+++++.. ....+++++.
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~----~~l~~~~~~~ 343 (371)
T PRK14875 273 VEDLLKYKRLDGVDDALRALADAL--FAG---GRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHA----QGLPDGVAVH 343 (371)
T ss_pred HHHHHHHhccccHHHHHHHHHHHh--ccC---cccchhHHHHHhcCCCCEEEEEECCCCccCHHHH----hhccCCCeEE
Confidence 0 00000000000000000 000 0001122345778899999999999999986643 2234578999
Q ss_pred EcCCCCceeecCCCCCCCCCCCcHHHHHHHHHH
Q 015401 345 LTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEH 377 (407)
Q Consensus 345 ~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~ 377 (407)
+++++||+.++++|+. +++.|.+||+.
T Consensus 344 ~~~~~gH~~~~e~p~~------~~~~i~~fl~~ 370 (371)
T PRK14875 344 VLPGAGHMPQMEAAAD------VNRLLAEFLGK 370 (371)
T ss_pred EeCCCCCChhhhCHHH------HHHHHHHHhcc
Confidence 9999999999999987 99999999864
No 49
>PLN02872 triacylglycerol lipase
Probab=99.89 E-value=2.5e-22 Score=185.32 Aligned_cols=304 Identities=18% Similarity=0.226 Sum_probs=178.7
Q ss_pred hhHHHHHHhhhcCCCCCCccEEEEEcCCCCEEEEEeecCCCC-CCCCCCcEEEEeCCCCCCCccHHH-----HHHHHHHH
Q 015401 66 CHVETIFAAFFRSLPDVKLKRECIRTKDDGSVALDWISGDHQ-LLPPDSPVLILMPGLTGGSEDSYV-----RHMLLRAR 139 (407)
Q Consensus 66 ~~~qt~~~~~~~~~~~~~~~r~~~~~~dg~~~~~~~~~~~~~-~~~~~~p~vv~lHG~~g~~~~~~~-----~~~~~~l~ 139 (407)
.-+||+...+.++. ..+.++..++++||..+.+++.+.... ..+..+|+|+++||+.+++. .|. ..++..|.
T Consensus 27 ~~~~t~~~~~i~~~-gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~-~w~~~~~~~sla~~La 104 (395)
T PLN02872 27 SPVESLCAQLIHPA-GYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGD-AWFLNSPEQSLGFILA 104 (395)
T ss_pred CCchhhHHHHHHHc-CCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCccccccc-ceeecCcccchHHHHH
Confidence 45789888776654 677899999999999999998754321 12235789999999876554 332 24555678
Q ss_pred hCCcEEEEEeCCCCCCCCCC------CC---CcccCCCh-hHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCC
Q 015401 140 SKGWRVVVFNSRGCGDSPVT------TP---QFYSASFL-GDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESH 209 (407)
Q Consensus 140 ~~g~~vi~~D~rG~G~S~~~------~~---~~~~~~~~-~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~ 209 (407)
++||+|+++|+||++.|... .. .++..+++ .|+.++++++.... ..+++++|||+||.+++.++ .+|+
T Consensus 105 ~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~-~~~v~~VGhS~Gg~~~~~~~-~~p~ 182 (395)
T PLN02872 105 DHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSIT-NSKIFIVGHSQGTIMSLAAL-TQPN 182 (395)
T ss_pred hCCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhcc-CCceEEEEECHHHHHHHHHh-hChH
Confidence 89999999999999866321 11 23344455 79999999997543 35999999999999998655 5665
Q ss_pred C-CCceeEEEEcCCCCHHHHHHHHhc-----chhHHH--------------HHHHHHHHHH-HHHHH--HhhhhhcCCCC
Q 015401 210 S-CPLSGAVSLCNPFNLVIADQDFRK-----GFNIVY--------------DKALASALCR-IFKKH--ALLFEDMGGEF 266 (407)
Q Consensus 210 ~-~~v~~~v~l~~p~~~~~~~~~~~~-----~~~~~~--------------~~~~~~~l~~-~~~~~--~~~~~~~~~~~ 266 (407)
. ..|++++++++...+......+.. ....++ ...+...+.. ..... ...+......+
T Consensus 183 ~~~~v~~~~~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~ 262 (395)
T PLN02872 183 VVEMVEAAALLCPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCF 262 (395)
T ss_pred HHHHHHHHHHhcchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCccc
Confidence 2 227777777765322110000000 000000 0000000000 00000 00011111111
Q ss_pred CHH----------HHhcCCCHHHHhhccccc-----cCCCCCHHHHHhhCC-cchhcCCC--ccceeeeecCCCCCCCCC
Q 015401 267 NIP----------LAANAKSVRQFDDGLTRV-----SFGFKSVDDYYSNSS-SSDSIKHV--RIPLLCIQAQNDPIAPSR 328 (407)
Q Consensus 267 ~~~----------~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-~~~~l~~i--~~Pvlii~g~~D~~~~~~ 328 (407)
+.. .....+.+..|.+.+... .+|...-...|.... +.-.+.+| ++|+++++|++|.+++++
T Consensus 263 n~~~~~~~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~ 342 (395)
T PLN02872 263 NASRIDYYLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVT 342 (395)
T ss_pred chhhhhHHHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHH
Confidence 110 011122233333222221 122212223344333 33457888 589999999999999987
Q ss_pred CCChhHHhcCCC-eEEEEcCCCCceeec---CCCCCCCCCCCcHHHHHHHHHHHHH
Q 015401 329 GIPCEDIKANPN-CLLILTPKGGHLGWV---AGPEAPFGSPWTDPVVMDFLEHLER 380 (407)
Q Consensus 329 ~~~~~~~~~~~~-~~~~~~~~~gH~~~~---~~p~~~~~~~w~~~~i~~fl~~~~~ 380 (407)
.+ +.+.+..++ .+++.+++.||..++ +.++. +.+.|.+|+++...
T Consensus 343 dv-~~l~~~Lp~~~~l~~l~~~gH~dfi~~~eape~------V~~~Il~fL~~~~~ 391 (395)
T PLN02872 343 DV-EHTLAELPSKPELLYLENYGHIDFLLSTSAKED------VYNHMIQFFRSLGK 391 (395)
T ss_pred HH-HHHHHHCCCccEEEEcCCCCCHHHHhCcchHHH------HHHHHHHHHHHhhh
Confidence 76 455666666 688889999997554 66666 88999999986543
No 50
>PRK05855 short chain dehydrogenase; Validated
Probab=99.89 E-value=3.3e-22 Score=198.37 Aligned_cols=269 Identities=17% Similarity=0.186 Sum_probs=151.4
Q ss_pred EEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCC--CCcc
Q 015401 87 ECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTT--PQFY 164 (407)
Q Consensus 87 ~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~--~~~~ 164 (407)
+.+...||..+.+....+. ++|+|||+||+++++. .| ..+...+ .++|+|+++|+||||.|+... ..++
T Consensus 5 ~~~~~~~g~~l~~~~~g~~------~~~~ivllHG~~~~~~-~w-~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~~~~~~ 75 (582)
T PRK05855 5 RTVVSSDGVRLAVYEWGDP------DRPTVVLVHGYPDNHE-VW-DGVAPLL-ADRFRVVAYDVRGAGRSSAPKRTAAYT 75 (582)
T ss_pred EEEEeeCCEEEEEEEcCCC------CCCeEEEEcCCCchHH-HH-HHHHHHh-hcceEEEEecCCCCCCCCCCCcccccC
Confidence 4455567877776644322 5789999999976553 34 5566555 789999999999999997543 2456
Q ss_pred cCCChhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhcc--CCCCCceeEEEEcCCCCHHHHHHHHhcchhHHHHH
Q 015401 165 SASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHE--SHSCPLSGAVSLCNPFNLVIADQDFRKGFNIVYDK 242 (407)
Q Consensus 165 ~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~--p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~~~~~ 242 (407)
.+.+++|+.++++.+... .+++++||||||.+++.++.+. +.. +..++.++++... ................
T Consensus 76 ~~~~a~dl~~~i~~l~~~---~~~~lvGhS~Gg~~a~~~a~~~~~~~~--v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 149 (582)
T PRK05855 76 LARLADDFAAVIDAVSPD---RPVHLLAHDWGSIQGWEAVTRPRAAGR--IASFTSVSGPSLD-HVGFWLRSGLRRPTPR 149 (582)
T ss_pred HHHHHHHHHHHHHHhCCC---CcEEEEecChHHHHHHHHHhCccchhh--hhhheeccCCchH-HHHHHHhhcccccchh
Confidence 788899999999987643 3599999999999998887763 233 5555555544311 1000000000000000
Q ss_pred HHHHHHHHHHHHHHhhhhhcCCCCCHHHHh--cCCCHHHHhhccccc-----------cCCCCCHHHH---HhhCCcchh
Q 015401 243 ALASALCRIFKKHALLFEDMGGEFNIPLAA--NAKSVRQFDDGLTRV-----------SFGFKSVDDY---YSNSSSSDS 306 (407)
Q Consensus 243 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-----------~~~~~~~~~~---~~~~~~~~~ 306 (407)
.+...+............... ........ ..+.+..+....... .........+ +........
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (582)
T PRK05855 150 RLARALGQLLRSWYIYLFHLP-VLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSRPR 228 (582)
T ss_pred hhhHHHHHHhhhHHHHHHhCC-CCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhccCc
Confidence 000000000000000000000 00000000 000000000000000 0000011111 111111223
Q ss_pred cCCCccceeeeecCCCCCCCCCCCChhHHhcCCCeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHHHH
Q 015401 307 IKHVRIPLLCIQAQNDPIAPSRGIPCEDIKANPNCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEHLE 379 (407)
Q Consensus 307 l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~~~ 379 (407)
+..+++|+++|+|++|++++++.. +.+.+..++..+++++ +||+.++++|+. +.+.|.+|++...
T Consensus 229 ~~~~~~P~lii~G~~D~~v~~~~~-~~~~~~~~~~~~~~~~-~gH~~~~e~p~~------~~~~i~~fl~~~~ 293 (582)
T PRK05855 229 ERYTDVPVQLIVPTGDPYVRPALY-DDLSRWVPRLWRREIK-AGHWLPMSHPQV------LAAAVAEFVDAVE 293 (582)
T ss_pred cCCccCceEEEEeCCCcccCHHHh-ccccccCCcceEEEcc-CCCcchhhChhH------HHHHHHHHHHhcc
Confidence 556899999999999999998765 3555667888888886 799999999998 9999999998754
No 51
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.87 E-value=1.9e-21 Score=208.53 Aligned_cols=245 Identities=17% Similarity=0.227 Sum_probs=143.2
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCC--------CCcccCCChhHHHHHHHHHHhhC
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTT--------PQFYSASFLGDMQEVVAHVGSKY 183 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~--------~~~~~~~~~~Dl~~~l~~l~~~~ 183 (407)
++++|||+||++++.. .| ..++..+ ..+|+|+++|+||||.|.... ..++.+.+++|+.++++.+...
T Consensus 1370 ~~~~vVllHG~~~s~~-~w-~~~~~~L-~~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~- 1445 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGE-DW-IPIMKAI-SGSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITPG- 1445 (1655)
T ss_pred CCCeEEEECCCCCCHH-HH-HHHHHHH-hCCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCCC-
Confidence 5689999999988765 44 5565555 557999999999999996532 1234455677777777776554
Q ss_pred CCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHH-HHHhcchhHHHHHHHHH-HHHHHHHHHH--hhh
Q 015401 184 PKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIAD-QDFRKGFNIVYDKALAS-ALCRIFKKHA--LLF 259 (407)
Q Consensus 184 ~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~-~~~~~~~~~~~~~~~~~-~l~~~~~~~~--~~~ 259 (407)
+++++||||||.+++.++.++|++ |+++|++++........ ..............+.. .+........ ..+
T Consensus 1446 ---~v~LvGhSmGG~iAl~~A~~~P~~--V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~ 1520 (1655)
T PLN02980 1446 ---KVTLVGYSMGARIALYMALRFSDK--IEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYSGELW 1520 (1655)
T ss_pred ---CEEEEEECHHHHHHHHHHHhChHh--hCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhccHHHh
Confidence 999999999999999999999999 99999997643211100 00000000000000000 0000000000 000
Q ss_pred hhcCCCCCHHHH----hcCCCHHHHhhccccccCCCCCHHHHHhhCCcchhcCCCccceeeeecCCCCCCCCCCCChhHH
Q 015401 260 EDMGGEFNIPLA----ANAKSVRQFDDGLTRVSFGFKSVDDYYSNSSSSDSIKHVRIPLLCIQAQNDPIAPSRGIPCEDI 335 (407)
Q Consensus 260 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~ 335 (407)
............ ........+...+... ......+..+.+.+|++|+|+|+|++|.+++ +.. ..+.
T Consensus 1521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--------~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a-~~~~ 1590 (1655)
T PLN02980 1521 KSLRNHPHFNKIVASRLLHKDVPSLAKLLSDL--------SIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIA-QKMY 1590 (1655)
T ss_pred hhhccCHHHHHHHHHHHhcCCHHHHHHHHHHh--------hhcccchHHHHHhhCCCCEEEEEECCCCccH-HHH-HHHH
Confidence 000000000000 0000000000000000 0001122345688999999999999999775 322 3444
Q ss_pred hcCCC------------eEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHHHHHh
Q 015401 336 KANPN------------CLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEHLERA 381 (407)
Q Consensus 336 ~~~~~------------~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~~~~~ 381 (407)
+..++ +++++++++||.+++|+|+. +++.|.+||+.....
T Consensus 1591 ~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~------f~~~I~~FL~~~~~~ 1642 (1655)
T PLN02980 1591 REIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLP------VIRALRKFLTRLHNS 1642 (1655)
T ss_pred HHccccccccccccccceEEEEECCCCCchHHHCHHH------HHHHHHHHHHhcccc
Confidence 44443 58999999999999999998 999999999986543
No 52
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.86 E-value=4.6e-21 Score=151.83 Aligned_cols=228 Identities=16% Similarity=0.227 Sum_probs=148.9
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhC-CcEEEEEeCCCCCCCCCCCCCcccCCChhHH---HHHHHHHHhhCCCCc
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSK-GWRVVVFNSRGCGDSPVTTPQFYSASFLGDM---QEVVAHVGSKYPKAH 187 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~-g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl---~~~l~~l~~~~~~~~ 187 (407)
+.-.|+++.|..|+.+..| ...+..+.+. .+.++++|.||+|.|..+...+..+-+.+|. .++++.|+.. +
T Consensus 41 G~~~iLlipGalGs~~tDf-~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~aLk~~----~ 115 (277)
T KOG2984|consen 41 GPNYILLIPGALGSYKTDF-PPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDLMEALKLE----P 115 (277)
T ss_pred CCceeEecccccccccccC-CHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHHHHHhCCC----C
Confidence 3456999999988887555 3333344333 3999999999999998766665555555555 4555555555 9
Q ss_pred EEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhhhcCCCCC
Q 015401 188 LYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNIVYDKALASALCRIFKKHALLFEDMGGEFN 267 (407)
Q Consensus 188 v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 267 (407)
+.++|||-||..++..|+++++. |..+|+.++..-..........+++... .+..+...-.+ ..+.
T Consensus 116 fsvlGWSdGgiTalivAak~~e~--v~rmiiwga~ayvn~~~~ma~kgiRdv~---------kWs~r~R~P~e---~~Yg 181 (277)
T KOG2984|consen 116 FSVLGWSDGGITALIVAAKGKEK--VNRMIIWGAAAYVNHLGAMAFKGIRDVN---------KWSARGRQPYE---DHYG 181 (277)
T ss_pred eeEeeecCCCeEEEEeeccChhh--hhhheeecccceecchhHHHHhchHHHh---------hhhhhhcchHH---HhcC
Confidence 99999999999999999999999 9999998765422222111111111100 00000000000 0011
Q ss_pred HHHHhcCCCHHHHhhccccccCCCCCHHHHHhhC---CcchhcCCCccceeeeecCCCCCCCCCCCChhHHhcCCCeEEE
Q 015401 268 IPLAANAKSVRQFDDGLTRVSFGFKSVDDYYSNS---SSSDSIKHVRIPLLCIQAQNDPIAPSRGIPCEDIKANPNCLLI 344 (407)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~ 344 (407)
.+... .....|.+.+ ..++... -+...+++|+||+||+||+.|++++...+ -.+....+.+++.
T Consensus 182 ~e~f~--~~wa~wvD~v----------~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv-~fi~~~~~~a~~~ 248 (277)
T KOG2984|consen 182 PETFR--TQWAAWVDVV----------DQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHV-CFIPVLKSLAKVE 248 (277)
T ss_pred HHHHH--HHHHHHHHHH----------HHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCc-cchhhhcccceEE
Confidence 11100 0111111110 1111111 14567899999999999999999998887 4778889999999
Q ss_pred EcCCCCceeecCCCCCCCCCCCcHHHHHHHHHH
Q 015401 345 LTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEH 377 (407)
Q Consensus 345 ~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~ 377 (407)
+.|.|+|..++.-+++ |++.+.+||++
T Consensus 249 ~~peGkHn~hLrya~e------Fnklv~dFl~~ 275 (277)
T KOG2984|consen 249 IHPEGKHNFHLRYAKE------FNKLVLDFLKS 275 (277)
T ss_pred EccCCCcceeeechHH------HHHHHHHHHhc
Confidence 9999999999999887 99999999975
No 53
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.86 E-value=2.2e-20 Score=166.36 Aligned_cols=250 Identities=14% Similarity=0.081 Sum_probs=142.6
Q ss_pred CCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCc--cHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCCh
Q 015401 92 KDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSE--DSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFL 169 (407)
Q Consensus 92 ~dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~--~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~ 169 (407)
.+|..+...+..+.+ ..++.||++||.++... ...+..++..+.++||+|+++|+||||.|+... .+...+.
T Consensus 9 ~~~~~l~g~~~~p~~----~~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~--~~~~~~~ 82 (274)
T TIGR03100 9 CEGETLVGVLHIPGA----SHTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN--LGFEGID 82 (274)
T ss_pred cCCcEEEEEEEcCCC----CCCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC--CCHHHHH
Confidence 345555444444432 13567887787543221 122356778888899999999999999987432 3445678
Q ss_pred hHHHHHHHHHHhhCC-CCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchhHHHHHHHHHHH
Q 015401 170 GDMQEVVAHVGSKYP-KAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNIVYDKALASAL 248 (407)
Q Consensus 170 ~Dl~~~l~~l~~~~~-~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~l 248 (407)
+|+.++++.++...+ ..+++++||||||.+++.++... .. |+++|++++++........ ......+...+..
T Consensus 83 ~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~~-~~--v~~lil~~p~~~~~~~~~~--~~~~~~~~~~~~~-- 155 (274)
T TIGR03100 83 ADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPAD-LR--VAGLVLLNPWVRTEAAQAA--SRIRHYYLGQLLS-- 155 (274)
T ss_pred HHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhhC-CC--ccEEEEECCccCCcccchH--HHHHHHHHHHHhC--
Confidence 999999999987653 35799999999999999997653 45 9999999876432110000 0000111110000
Q ss_pred HHHHHHHHhhhh-hcCCCCCHHHHhcCCCHHH----HhhccccccCCCCCHHHHHhhCCcchhcCCCccceeeeecCCCC
Q 015401 249 CRIFKKHALLFE-DMGGEFNIPLAANAKSVRQ----FDDGLTRVSFGFKSVDDYYSNSSSSDSIKHVRIPLLCIQAQNDP 323 (407)
Q Consensus 249 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~ 323 (407)
. ..+. ...+..+...... .+.. +.. ......... ........+..+++|+++++|..|+
T Consensus 156 ------~-~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~-----~~~~~~~~l~~~~~P~ll~~g~~D~ 219 (274)
T TIGR03100 156 ------A-DFWRKLLSGEVNLGSSLR--GLGDALLKARQ--KGDEVAHGG-----LAERMKAGLERFQGPVLFILSGNDL 219 (274)
T ss_pred ------h-HHHHHhcCCCccHHHHHH--HHHHHHHhhhh--cCCCcccch-----HHHHHHHHHHhcCCcEEEEEcCcch
Confidence 0 1101 0111122111110 0100 100 000000000 0111234566779999999999998
Q ss_pred CCCCCC----CChhHHh--cCCCeEEEEcCCCCceeecCCC-CCCCCCCCcHHHHHHHHH
Q 015401 324 IAPSRG----IPCEDIK--ANPNCLLILTPKGGHLGWVAGP-EAPFGSPWTDPVVMDFLE 376 (407)
Q Consensus 324 ~~~~~~----~~~~~~~--~~~~~~~~~~~~~gH~~~~~~p-~~~~~~~w~~~~i~~fl~ 376 (407)
..+.-. ....... ..++++++.+++++|+...+.. ++ +.+.|.+||+
T Consensus 220 ~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e~~~~~------v~~~i~~wL~ 273 (274)
T TIGR03100 220 TAQEFADSVLGEPAWRGALEDPGIERVEIDGADHTFSDRVWREW------VAARTTEWLR 273 (274)
T ss_pred hHHHHHHHhccChhhHHHhhcCCeEEEecCCCCcccccHHHHHH------HHHHHHHHHh
Confidence 764210 0012222 3489999999999998755555 44 8899999985
No 54
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.84 E-value=1.6e-20 Score=173.48 Aligned_cols=276 Identities=12% Similarity=0.130 Sum_probs=153.3
Q ss_pred EEEcCCCCEE---EEEeecCCCCCCCCCCcEEEEeCCCCCCCc-----------cHHHHHHHHH---HHhCCcEEEEEeC
Q 015401 88 CIRTKDDGSV---ALDWISGDHQLLPPDSPVLILMPGLTGGSE-----------DSYVRHMLLR---ARSKGWRVVVFNS 150 (407)
Q Consensus 88 ~~~~~dg~~~---~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~-----------~~~~~~~~~~---l~~~g~~vi~~D~ 150 (407)
.|++..|+.+ .+.|..-+.. .+...++||++|+++|+++ ..|+..++-. +-...|.||++|.
T Consensus 29 ~f~l~~G~~l~~~~~~Y~t~G~l-n~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~ 107 (389)
T PRK06765 29 EFTTEGGRTIPDVQMGYETYGTL-NRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDT 107 (389)
T ss_pred CEEccCCCCcCCceEEEEecccc-CCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecc
Confidence 4666667643 3444322210 0124589999999998653 2344444332 3345799999999
Q ss_pred CCCCCCCCC---------------------CCCcccCCChhHHHHHHHHHHhhCCCCcEE-EEEechhHHHHHHHHhccC
Q 015401 151 RGCGDSPVT---------------------TPQFYSASFLGDMQEVVAHVGSKYPKAHLY-AVGWSLGANILIRYLGHES 208 (407)
Q Consensus 151 rG~G~S~~~---------------------~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~-lvG~S~Gg~ia~~~a~~~p 208 (407)
.|-|.|+.+ .+.++..++++++..++++++.. ++. ++||||||++++.+|.++|
T Consensus 108 lG~~~~~~p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~----~~~~vvG~SmGG~ial~~a~~~P 183 (389)
T PRK06765 108 LCNVQVKDPNVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIA----RLHAVMGPSMGGMQAQEWAVHYP 183 (389)
T ss_pred cCCCcCCCCCCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCC----CceEEEEECHHHHHHHHHHHHCh
Confidence 997753211 12244556677777777776665 776 9999999999999999999
Q ss_pred CCCCceeEEEEcCCCCHHHHH-HHHhcchhH-----------HH------HHHHH--HHHHHHHHHHHhhhh-hcCCC--
Q 015401 209 HSCPLSGAVSLCNPFNLVIAD-QDFRKGFNI-----------VY------DKALA--SALCRIFKKHALLFE-DMGGE-- 265 (407)
Q Consensus 209 ~~~~v~~~v~l~~p~~~~~~~-~~~~~~~~~-----------~~------~~~~~--~~l~~~~~~~~~~~~-~~~~~-- 265 (407)
++ |+++|++++........ ..+...... .| ...+. ..+..........+. .....
T Consensus 184 ~~--v~~lv~ia~~~~~~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~ 261 (389)
T PRK06765 184 HM--VERMIGVIGNPQNDAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNAS 261 (389)
T ss_pred Hh--hheEEEEecCCCCChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCcc
Confidence 99 99999998754321111 111000000 00 00000 000000000000000 00000
Q ss_pred --CCH-HHHhcCCCHHHHhhccccccCCCCCHHHHH------hh-------CCcchhcCCCccceeeeecCCCCCCCCCC
Q 015401 266 --FNI-PLAANAKSVRQFDDGLTRVSFGFKSVDDYY------SN-------SSSSDSIKHVRIPLLCIQAQNDPIAPSRG 329 (407)
Q Consensus 266 --~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~-------~~~~~~l~~i~~Pvlii~g~~D~~~~~~~ 329 (407)
.+. ........+..+.+..........+...|+ .. .+..+.+.+|++|+|+|+|++|.++|++.
T Consensus 262 ~~~~~~~~~~~~~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~ 341 (389)
T PRK06765 262 IEVDPYEKVSTLTSFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRY 341 (389)
T ss_pred ccccccccccchhhHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHH
Confidence 000 000000011122111111111111111111 11 13456788999999999999999999876
Q ss_pred CChhHHhcCC----CeEEEEcCC-CCceeecCCCCCCCCCCCcHHHHHHHHHH
Q 015401 330 IPCEDIKANP----NCLLILTPK-GGHLGWVAGPEAPFGSPWTDPVVMDFLEH 377 (407)
Q Consensus 330 ~~~~~~~~~~----~~~~~~~~~-~gH~~~~~~p~~~~~~~w~~~~i~~fl~~ 377 (407)
. +.+.+..+ +++++++++ +||+.++++|+. +++.|.+||++
T Consensus 342 ~-~~la~~lp~~~~~a~l~~I~s~~GH~~~le~p~~------~~~~I~~FL~~ 387 (389)
T PRK06765 342 N-YKMVDILQKQGKYAEVYEIESINGHMAGVFDIHL------FEKKIYEFLNR 387 (389)
T ss_pred H-HHHHHHhhhcCCCeEEEEECCCCCcchhhcCHHH------HHHHHHHHHcc
Confidence 5 45555554 789999985 899999999998 99999999864
No 55
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.84 E-value=3e-21 Score=167.91 Aligned_cols=213 Identities=17% Similarity=0.284 Sum_probs=122.8
Q ss_pred cEEEEEeCCCCCCCCC----CCCCcccCCChhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEE
Q 015401 143 WRVVVFNSRGCGDSPV----TTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVS 218 (407)
Q Consensus 143 ~~vi~~D~rG~G~S~~----~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~ 218 (407)
|+|+++|+||+|.|+. ....++ .+|+.+.++.+....+..+++++||||||.+++.+|+++|++ |+++|+
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~--v~~lvl 74 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYT----TDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPER--VKKLVL 74 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHC----HHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGG--EEEEEE
T ss_pred CEEEEEeCCCCCCCCCCccCCccccc----HHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchh--hcCcEE
Confidence 7899999999999983 122333 445555555555554545899999999999999999999998 999999
Q ss_pred EcCCC--CHHHHHHHHhc-chhHHHHHHHH----HHHHHHHHHHH---hhhhhcCCCCCHHHHhcCCCHHHHhhc-cccc
Q 015401 219 LCNPF--NLVIADQDFRK-GFNIVYDKALA----SALCRIFKKHA---LLFEDMGGEFNIPLAANAKSVRQFDDG-LTRV 287 (407)
Q Consensus 219 l~~p~--~~~~~~~~~~~-~~~~~~~~~~~----~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 287 (407)
++++. ........+.. ........... ........... ........ ........ ....... ....
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~ 150 (230)
T PF00561_consen 75 ISPPPDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFV-EDFLKQFQ---SQQYARFAETDA 150 (230)
T ss_dssp ESESSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTHHHHHH---HHHHHHTCHHHH
T ss_pred EeeeccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccc-cchhhccc---hhhhhHHHHHHH
Confidence 98862 11111111111 00000000000 00000010000 00000000 00000000 0000000 0000
Q ss_pred cC-CCCCHHHHHhhCCcchhcCCCccceeeeecCCCCCCCCCCCChhHHhcCCCeEEEEcCCCCceeecCCCCCCCCCCC
Q 015401 288 SF-GFKSVDDYYSNSSSSDSIKHVRIPLLCIQAQNDPIAPSRGIPCEDIKANPNCLLILTPKGGHLGWVAGPEAPFGSPW 366 (407)
Q Consensus 288 ~~-~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~w 366 (407)
.. .+.....++...+....+.+|++|+++++|++|+++|++.. ..+.+..|+.++++++++||..+++++++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~-~~~~~~~~~~~~~~~~~~GH~~~~~~~~~------ 223 (230)
T PF00561_consen 151 FDNMFWNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESS-EQLAKLIPNSQLVLIEGSGHFAFLEGPDE------ 223 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHH-HHHHHHSTTEEEEEETTCCSTHHHHSHHH------
T ss_pred HhhhccccccccccccccccccccCCCeEEEEeCCCCCCCHHHH-HHHHHhcCCCEEEECCCCChHHHhcCHHh------
Confidence 00 00022334444555677889999999999999999998876 45788999999999999999999999976
Q ss_pred cHHHHH
Q 015401 367 TDPVVM 372 (407)
Q Consensus 367 ~~~~i~ 372 (407)
+.+.|.
T Consensus 224 ~~~~i~ 229 (230)
T PF00561_consen 224 FNEIII 229 (230)
T ss_dssp HHHHHH
T ss_pred hhhhhc
Confidence 666553
No 56
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.83 E-value=1.7e-19 Score=144.68 Aligned_cols=232 Identities=16% Similarity=0.156 Sum_probs=158.5
Q ss_pred CCCCccEEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCC
Q 015401 80 PDVKLKRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVT 159 (407)
Q Consensus 80 ~~~~~~r~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~ 159 (407)
..++|++..+.++|.-++...|...+. ++|+++++||..|+.. ..+...-.....-+.+|+.+++||+|.|++.
T Consensus 50 ~n~pye~i~l~T~D~vtL~a~~~~~E~-----S~pTlLyfh~NAGNmG-hr~~i~~~fy~~l~mnv~ivsYRGYG~S~Gs 123 (300)
T KOG4391|consen 50 FNMPYERIELRTRDKVTLDAYLMLSES-----SRPTLLYFHANAGNMG-HRLPIARVFYVNLKMNVLIVSYRGYGKSEGS 123 (300)
T ss_pred cCCCceEEEEEcCcceeEeeeeecccC-----CCceEEEEccCCCccc-chhhHHHHHHHHcCceEEEEEeeccccCCCC
Confidence 467899999999998888777776553 8999999999988764 3322222234566899999999999999764
Q ss_pred CCCcccCCChhHHHHHHHHHHhhC--CCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchh
Q 015401 160 TPQFYSASFLGDMQEVVAHVGSKY--PKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFN 237 (407)
Q Consensus 160 ~~~~~~~~~~~Dl~~~l~~l~~~~--~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~ 237 (407)
. +-+++.-|.+++++++..+. ...++++.|-|+||.+|+.+|++..++ +.++|+-..-..+......+..
T Consensus 124 p---sE~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~r--i~~~ivENTF~SIp~~~i~~v~--- 195 (300)
T KOG4391|consen 124 P---SEEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDR--ISAIIVENTFLSIPHMAIPLVF--- 195 (300)
T ss_pred c---cccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhh--eeeeeeechhccchhhhhheec---
Confidence 3 34566788999999998752 356999999999999999999999998 8888865432211000000000
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHhcCCCHHHHhhccccccCCCCCHHHHHhhCCcchhcCCCccceeee
Q 015401 238 IVYDKALASALCRIFKKHALLFEDMGGEFNIPLAANAKSVRQFDDGLTRVSFGFKSVDDYYSNSSSSDSIKHVRIPLLCI 317 (407)
Q Consensus 238 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii 317 (407)
....+.+..+..+ ....+...+.+.++|.|+|
T Consensus 196 ----p~~~k~i~~lc~k--------------------------------------------n~~~S~~ki~~~~~P~LFi 227 (300)
T KOG4391|consen 196 ----PFPMKYIPLLCYK--------------------------------------------NKWLSYRKIGQCRMPFLFI 227 (300)
T ss_pred ----cchhhHHHHHHHH--------------------------------------------hhhcchhhhccccCceEEe
Confidence 0000000000000 0111223455668999999
Q ss_pred ecCCCCCCCCCCCChhHHhcC--CCeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHHHHHh
Q 015401 318 QAQNDPIAPSRGIPCEDIKAN--PNCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEHLERA 381 (407)
Q Consensus 318 ~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~~~~~ 381 (407)
.|..|.++|+... +.+-... ...++..+|+|.|..-.-... +.+.|.+||.+....
T Consensus 228 SGlkDelVPP~~M-r~Ly~~c~S~~Krl~eFP~gtHNDT~i~dG-------Yfq~i~dFlaE~~~~ 285 (300)
T KOG4391|consen 228 SGLKDELVPPVMM-RQLYELCPSRTKRLAEFPDGTHNDTWICDG-------YFQAIEDFLAEVVKS 285 (300)
T ss_pred ecCccccCCcHHH-HHHHHhCchhhhhheeCCCCccCceEEecc-------HHHHHHHHHHHhccC
Confidence 9999999999865 4444444 467899999999974433221 669999999887653
No 57
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.83 E-value=1.1e-20 Score=163.33 Aligned_cols=247 Identities=18% Similarity=0.195 Sum_probs=151.5
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHHh-CCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEE
Q 015401 111 PDSPVLILMPGLTGGSEDSYVRHMLLRARS-KGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLY 189 (407)
Q Consensus 111 ~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~-~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~ 189 (407)
...|+++++||+.|+.. +| ..+...|.. -+-.|+++|.|.||.|+.... .+...+++|+..+++..+..+...+++
T Consensus 50 ~~~Pp~i~lHGl~GS~~-Nw-~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~-h~~~~ma~dv~~Fi~~v~~~~~~~~~~ 126 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKE-NW-RSVAKNLSRKLGRDVYAVDVRNHGSSPKITV-HNYEAMAEDVKLFIDGVGGSTRLDPVV 126 (315)
T ss_pred CCCCceEEecccccCCC-CH-HHHHHHhcccccCceEEEecccCCCCccccc-cCHHHHHHHHHHHHHHcccccccCCce
Confidence 37899999999999774 66 677776654 477999999999999986433 346788999999999997655556999
Q ss_pred EEEechhH-HHHHHHHhccCCCCCceeEEEEcCCC-CHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhhhcCCCCC
Q 015401 190 AVGWSLGA-NILIRYLGHESHSCPLSGAVSLCNPF-NLVIADQDFRKGFNIVYDKALASALCRIFKKHALLFEDMGGEFN 267 (407)
Q Consensus 190 lvG~S~Gg-~ia~~~a~~~p~~~~v~~~v~l~~p~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 267 (407)
++|||||| .+++..+...|+. +..+|++..+. ...........-+..+...-.... .........+.+.
T Consensus 127 l~GHsmGG~~~~m~~t~~~p~~--~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~---~~~~rke~~~~l~---- 197 (315)
T KOG2382|consen 127 LLGHSMGGVKVAMAETLKKPDL--IERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIG---VSRGRKEALKSLI---- 197 (315)
T ss_pred ecccCcchHHHHHHHHHhcCcc--cceeEEEecCCccCCcccchHHHHHHHHHhcccccc---ccccHHHHHHHHH----
Confidence 99999999 7777888889988 88888875432 110000000000000000000000 0000000000000
Q ss_pred HHHHhcCCCHHHHhhc-c----ccccCCC----CCHHHHH---hhCCcchhc--CCCccceeeeecCCCCCCCCCCCChh
Q 015401 268 IPLAANAKSVRQFDDG-L----TRVSFGF----KSVDDYY---SNSSSSDSI--KHVRIPLLCIQAQNDPIAPSRGIPCE 333 (407)
Q Consensus 268 ~~~~~~~~~~~~~~~~-~----~~~~~~~----~~~~~~~---~~~~~~~~l--~~i~~Pvlii~g~~D~~~~~~~~~~~ 333 (407)
.......+.+|-.. + ....+.| ..+.+.+ ...+....+ .....||+++.|.++.+++.+.. ..
T Consensus 198 --~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~-~~ 274 (315)
T KOG2382|consen 198 --EVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPDEHY-PR 274 (315)
T ss_pred --HHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcChhHH-HH
Confidence 00000001111100 0 0000000 1111111 122222223 55578999999999999998866 57
Q ss_pred HHhcCCCeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHHH
Q 015401 334 DIKANPNCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEHL 378 (407)
Q Consensus 334 ~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~~ 378 (407)
+.+..|+++++.++++||+.++|+|+. +.+.|.+|++..
T Consensus 275 ~~~~fp~~e~~~ld~aGHwVh~E~P~~------~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 275 MEKIFPNVEVHELDEAGHWVHLEKPEE------FIESISEFLEEP 313 (315)
T ss_pred HHHhccchheeecccCCceeecCCHHH------HHHHHHHHhccc
Confidence 788899999999999999999999998 999999998753
No 58
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.83 E-value=1.1e-19 Score=167.91 Aligned_cols=107 Identities=12% Similarity=0.221 Sum_probs=87.1
Q ss_pred CCcEEEEeCCCCCCCccHHH------HHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCCh-hHHHHHHHHHHhhCC
Q 015401 112 DSPVLILMPGLTGGSEDSYV------RHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFL-GDMQEVVAHVGSKYP 184 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~------~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~-~Dl~~~l~~l~~~~~ 184 (407)
.+++||++||+..+ .|. +.++..+.++||+|+++|++|+|.|.. ..+.+++. +|+.++++++....+
T Consensus 61 ~~~pvl~v~~~~~~---~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~---~~~~~d~~~~~~~~~v~~l~~~~~ 134 (350)
T TIGR01836 61 HKTPLLIVYALVNR---PYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADR---YLTLDDYINGYIDKCVDYICRTSK 134 (350)
T ss_pred CCCcEEEecccccc---ceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHh---cCCHHHHHHHHHHHHHHHHHHHhC
Confidence 45679999997432 222 467888999999999999999998753 23344555 458889999998888
Q ss_pred CCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHH
Q 015401 185 KAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLV 226 (407)
Q Consensus 185 ~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~ 226 (407)
..+++++||||||.+++.+++.+|++ |+++|++++|++..
T Consensus 135 ~~~i~lvGhS~GG~i~~~~~~~~~~~--v~~lv~~~~p~~~~ 174 (350)
T TIGR01836 135 LDQISLLGICQGGTFSLCYAALYPDK--IKNLVTMVTPVDFE 174 (350)
T ss_pred CCcccEEEECHHHHHHHHHHHhCchh--eeeEEEeccccccC
Confidence 78999999999999999999999998 99999999988653
No 59
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.82 E-value=4e-19 Score=148.19 Aligned_cols=214 Identities=14% Similarity=0.170 Sum_probs=146.9
Q ss_pred EEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHHh-CCcEEEEEeCCCCCCCCCCCCCccc
Q 015401 87 ECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARS-KGWRVVVFNSRGCGDSPVTTPQFYS 165 (407)
Q Consensus 87 ~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~-~g~~vi~~D~rG~G~S~~~~~~~~~ 165 (407)
..+++..|+.+.-.+..+.. ...++|+++||......+ +..+...+.. -+++++.+|++|+|.|++.....
T Consensus 38 ~~~~t~rgn~~~~~y~~~~~----~~~~~lly~hGNa~Dlgq--~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~-- 109 (258)
T KOG1552|consen 38 FKVKTSRGNEIVCMYVRPPE----AAHPTLLYSHGNAADLGQ--MVELFKELSIFLNCNVVSYDYSGYGRSSGKPSER-- 109 (258)
T ss_pred EEeecCCCCEEEEEEEcCcc----ccceEEEEcCCcccchHH--HHHHHHHHhhcccceEEEEecccccccCCCcccc--
Confidence 34555667666544444442 146999999998544332 2223223322 48999999999999998755443
Q ss_pred CCChhHHHHHHHHHHhhC-CCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchhHHHHHHH
Q 015401 166 ASFLGDMQEVVAHVGSKY-PKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNIVYDKAL 244 (407)
Q Consensus 166 ~~~~~Dl~~~l~~l~~~~-~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~~~~~~~ 244 (407)
...+|+.++.++|+.++ +..+++++|+|+|+..++.+|++.| +.++|+.++-.+..
T Consensus 110 -n~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~----~~alVL~SPf~S~~------------------ 166 (258)
T KOG1552|consen 110 -NLYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP----LAAVVLHSPFTSGM------------------ 166 (258)
T ss_pred -cchhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC----cceEEEeccchhhh------------------
Confidence 56899999999999999 5789999999999999999999998 67888877532210
Q ss_pred HHHHHHHHHHHHhhhhhcCCCCCHHHHhcCCCHHHHhhccccccCCCCCHHHHHhhCCcchhcCCCccceeeeecCCCCC
Q 015401 245 ASALCRIFKKHALLFEDMGGEFNIPLAANAKSVRQFDDGLTRVSFGFKSVDDYYSNSSSSDSIKHVRIPLLCIQAQNDPI 324 (407)
Q Consensus 245 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~ 324 (407)
+-+.. . ...... +......+.++.|+||+|++||++|.+
T Consensus 167 ----rv~~~-------~------------~~~~~~------------------~d~f~~i~kI~~i~~PVLiiHgtdDev 205 (258)
T KOG1552|consen 167 ----RVAFP-------D------------TKTTYC------------------FDAFPNIEKISKITCPVLIIHGTDDEV 205 (258)
T ss_pred ----hhhcc-------C------------cceEEe------------------eccccccCcceeccCCEEEEecccCce
Confidence 00000 0 000000 001112467888999999999999999
Q ss_pred CCCCCCChhHHhcCCC-eEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHHHHH
Q 015401 325 APSRGIPCEDIKANPN-CLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEHLER 380 (407)
Q Consensus 325 ~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~~~~ 380 (407)
++...- ..+-+..++ .+..++.++||....-.|+ +.+.+..|+.....
T Consensus 206 v~~sHg-~~Lye~~k~~~epl~v~g~gH~~~~~~~~-------yi~~l~~f~~~~~~ 254 (258)
T KOG1552|consen 206 VDFSHG-KALYERCKEKVEPLWVKGAGHNDIELYPE-------YIEHLRRFISSVLP 254 (258)
T ss_pred eccccc-HHHHHhccccCCCcEEecCCCcccccCHH-------HHHHHHHHHHHhcc
Confidence 999876 444455444 4778888999986555554 78889999887654
No 60
>PRK10566 esterase; Provisional
Probab=99.82 E-value=8.3e-19 Score=154.65 Aligned_cols=207 Identities=16% Similarity=0.170 Sum_probs=124.2
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccC-------CChhHHHHHHHHHHhhC-
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSA-------SFLGDMQEVVAHVGSKY- 183 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~-------~~~~Dl~~~l~~l~~~~- 183 (407)
..|+||++||++++.. .| ..++..+.++||+|+++|+||+|.+.......... ...+|+.++++++....
T Consensus 26 ~~p~vv~~HG~~~~~~-~~-~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 103 (249)
T PRK10566 26 PLPTVFFYHGFTSSKL-VY-SYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGW 103 (249)
T ss_pred CCCEEEEeCCCCcccc-hH-HHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 5689999999877553 34 56778888899999999999999763221111111 22467777788877652
Q ss_pred -CCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhhhc
Q 015401 184 -PKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNIVYDKALASALCRIFKKHALLFEDM 262 (407)
Q Consensus 184 -~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 262 (407)
..++++++|||+||.+++.++.++|+ +.+.+.+.++..... . ...+ +...
T Consensus 104 ~~~~~i~v~G~S~Gg~~al~~~~~~~~---~~~~~~~~~~~~~~~-----------~-----~~~~----------~~~~ 154 (249)
T PRK10566 104 LLDDRLAVGGASMGGMTALGIMARHPW---VKCVASLMGSGYFTS-----------L-----ARTL----------FPPL 154 (249)
T ss_pred cCccceeEEeecccHHHHHHHHHhCCC---eeEEEEeeCcHHHHH-----------H-----HHHh----------cccc
Confidence 34689999999999999999998887 555554432211000 0 0000 0000
Q ss_pred CCCCCHHHHhcCCCHHHHhhccccccCCCCCHHHHHhhCCcchhcCCC-ccceeeeecCCCCCCCCCCCChhHHhcC---
Q 015401 263 GGEFNIPLAANAKSVRQFDDGLTRVSFGFKSVDDYYSNSSSSDSIKHV-RIPLLCIQAQNDPIAPSRGIPCEDIKAN--- 338 (407)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~Pvlii~g~~D~~~~~~~~~~~~~~~~--- 338 (407)
... .......+...+ ..+...+....+.++ ++|+|+++|++|.+++++... .+.+..
T Consensus 155 ~~~-------~~~~~~~~~~~~-----------~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~-~l~~~l~~~ 215 (249)
T PRK10566 155 IPE-------TAAQQAEFNNIV-----------APLAEWEVTHQLEQLADRPLLLWHGLADDVVPAAESL-RLQQALRER 215 (249)
T ss_pred ccc-------ccccHHHHHHHH-----------HHHhhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHH-HHHHHHHhc
Confidence 000 000000110000 001111222345565 689999999999999987652 222221
Q ss_pred --C-CeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHHH
Q 015401 339 --P-NCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEHL 378 (407)
Q Consensus 339 --~-~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~~ 378 (407)
+ ++++..++++||... ++ ..+.+.+||++.
T Consensus 216 g~~~~~~~~~~~~~~H~~~---~~-------~~~~~~~fl~~~ 248 (249)
T PRK10566 216 GLDKNLTCLWEPGVRHRIT---PE-------ALDAGVAFFRQH 248 (249)
T ss_pred CCCcceEEEecCCCCCccC---HH-------HHHHHHHHHHhh
Confidence 1 468888999999632 22 567888999853
No 61
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.78 E-value=4.9e-18 Score=161.20 Aligned_cols=235 Identities=14% Similarity=0.223 Sum_probs=137.8
Q ss_pred CCcEEEEeCCCCCCCccHHH---HHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCCh-hHHHHHHHHHHhhCCCCc
Q 015401 112 DSPVLILMPGLTGGSEDSYV---RHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFL-GDMQEVVAHVGSKYPKAH 187 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~---~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~-~Dl~~~l~~l~~~~~~~~ 187 (407)
.+++||++||+.....-... +.++..+.++||+|+++|+||+|.+... ...++++ +++.++++.+....+..+
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~---~~~ddY~~~~i~~al~~v~~~~g~~k 263 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQAD---KTFDDYIRDGVIAALEVVEAITGEKQ 263 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCccccc---CChhhhHHHHHHHHHHHHHHhcCCCC
Confidence 56889999998543321001 3688889999999999999999988532 2234555 457888888877667779
Q ss_pred EEEEEechhHHHHH----HHHhcc-CCCCCceeEEEEcCCCCHHHHHHH--Hh--c---chhHHH-------HHHHHHHH
Q 015401 188 LYAVGWSLGANILI----RYLGHE-SHSCPLSGAVSLCNPFNLVIADQD--FR--K---GFNIVY-------DKALASAL 248 (407)
Q Consensus 188 v~lvG~S~Gg~ia~----~~a~~~-p~~~~v~~~v~l~~p~~~~~~~~~--~~--~---~~~~~~-------~~~~~~~l 248 (407)
++++||||||.++. .+++.. +++ |+++++++++.++...... +. . .+.... ...+...+
T Consensus 264 v~lvG~cmGGtl~a~ala~~aa~~~~~r--v~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F 341 (532)
T TIGR01838 264 VNCVGYCIGGTLLSTALAYLAARGDDKR--IKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGYLDGRQMAVTF 341 (532)
T ss_pred eEEEEECcCcHHHHHHHHHHHHhCCCCc--cceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCCCCHHHHHHHH
Confidence 99999999999862 245554 667 9999999998875432111 00 0 000000 00000000
Q ss_pred HHHHHHHHhhhh----h-cCCCCCHHHHhcCCCHHHHhhccccccCCCCCHH----HHH----------hhCCcchhcCC
Q 015401 249 CRIFKKHALLFE----D-MGGEFNIPLAANAKSVRQFDDGLTRVSFGFKSVD----DYY----------SNSSSSDSIKH 309 (407)
Q Consensus 249 ~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~----------~~~~~~~~l~~ 309 (407)
.++......+. . +...... ...+..|....+.. ...... +.| ...+....+.+
T Consensus 342 -~~lrp~~l~w~~~v~~yl~g~~~~-----~fdll~Wn~D~t~l--P~~~~~~~lr~ly~~N~L~~G~~~v~g~~~dL~~ 413 (532)
T TIGR01838 342 -SLLRENDLIWNYYVDNYLKGKSPV-----PFDLLFWNSDSTNL--PGKMHNFYLRNLYLQNALTTGGLEVCGVRLDLSK 413 (532)
T ss_pred -HhcChhhHHHHHHHHHHhcCCCcc-----chhHHHHhccCccc--hHHHHHHHHHHHHhcCCCcCCeeEECCEecchhh
Confidence 00000000000 0 0000000 00001111000000 000000 111 11223457889
Q ss_pred CccceeeeecCCCCCCCCCCCChhHHhcCCCeEEEEcCCCCceeecCCCCC
Q 015401 310 VRIPLLCIQAQNDPIAPSRGIPCEDIKANPNCLLILTPKGGHLGWVAGPEA 360 (407)
Q Consensus 310 i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~ 360 (407)
|++|+++|.|++|.++|++.. +.+.+..++.+..+++++||..++++|..
T Consensus 414 I~vPvLvV~G~~D~IvP~~sa-~~l~~~i~~~~~~vL~~sGHi~~ienPp~ 463 (532)
T TIGR01838 414 VKVPVYIIATREDHIAPWQSA-YRGAALLGGPKTFVLGESGHIAGVVNPPS 463 (532)
T ss_pred CCCCEEEEeeCCCCcCCHHHH-HHHHHHCCCCEEEEECCCCCchHhhCCCC
Confidence 999999999999999998866 56667788888899999999999999865
No 62
>PRK11071 esterase YqiA; Provisional
Probab=99.77 E-value=4.7e-18 Score=142.21 Aligned_cols=185 Identities=14% Similarity=0.047 Sum_probs=109.6
Q ss_pred cEEEEeCCCCCCCccHHHH-HHHHHHHh--CCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEE
Q 015401 114 PVLILMPGLTGGSEDSYVR-HMLLRARS--KGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYA 190 (407)
Q Consensus 114 p~vv~lHG~~g~~~~~~~~-~~~~~l~~--~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~l 190 (407)
|+||++||++++.. .|.. .+...+.+ .+|+|+++|+||++. +.++++.++++.+ +.+++++
T Consensus 2 p~illlHGf~ss~~-~~~~~~~~~~l~~~~~~~~v~~~dl~g~~~-----------~~~~~l~~l~~~~----~~~~~~l 65 (190)
T PRK11071 2 STLLYLHGFNSSPR-SAKATLLKNWLAQHHPDIEMIVPQLPPYPA-----------DAAELLESLVLEH----GGDPLGL 65 (190)
T ss_pred CeEEEECCCCCCcc-hHHHHHHHHHHHHhCCCCeEEeCCCCCCHH-----------HHHHHHHHHHHHc----CCCCeEE
Confidence 67999999988776 4422 23333433 389999999999851 2345555555544 3449999
Q ss_pred EEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHH
Q 015401 191 VGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNIVYDKALASALCRIFKKHALLFEDMGGEFNIPL 270 (407)
Q Consensus 191 vG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 270 (407)
+||||||.+++.+|.++|. .+|+++++.+...... ...... ...+....
T Consensus 66 vG~S~Gg~~a~~~a~~~~~-----~~vl~~~~~~~~~~~~-------------------~~~~~~-------~~~~~~~~ 114 (190)
T PRK11071 66 VGSSLGGYYATWLSQCFML-----PAVVVNPAVRPFELLT-------------------DYLGEN-------ENPYTGQQ 114 (190)
T ss_pred EEECHHHHHHHHHHHHcCC-----CEEEECCCCCHHHHHH-------------------HhcCCc-------ccccCCCc
Confidence 9999999999999999983 2577887665211000 000000 00000000
Q ss_pred HhcCCCHHHHhhccccccCCCCCHHHHHhhCCcchhcCCCccceeeeecCCCCCCCCCCCChhHHhcCCCeEEEEcCCCC
Q 015401 271 AANAKSVRQFDDGLTRVSFGFKSVDDYYSNSSSSDSIKHVRIPLLCIQAQNDPIAPSRGIPCEDIKANPNCLLILTPKGG 350 (407)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~g 350 (407)
.. -+ ..+.. +. ..... ..+. ..+|+++|+|++|.++|.+... .+.+ +++.+++++|+
T Consensus 115 ~~--~~-~~~~~-------------d~-~~~~~-~~i~-~~~~v~iihg~~De~V~~~~a~-~~~~---~~~~~~~~ggd 171 (190)
T PRK11071 115 YV--LE-SRHIY-------------DL-KVMQI-DPLE-SPDLIWLLQQTGDEVLDYRQAV-AYYA---ACRQTVEEGGN 171 (190)
T ss_pred EE--Ec-HHHHH-------------HH-HhcCC-ccCC-ChhhEEEEEeCCCCcCCHHHHH-HHHH---hcceEEECCCC
Confidence 00 00 00000 00 00111 1233 6788899999999999998663 3333 45777889999
Q ss_pred ceeecCCCCCCCCCCCcHHHHHHHHH
Q 015401 351 HLGWVAGPEAPFGSPWTDPVVMDFLE 376 (407)
Q Consensus 351 H~~~~~~p~~~~~~~w~~~~i~~fl~ 376 (407)
|.. .+.+. +.+.+.+|++
T Consensus 172 H~f--~~~~~------~~~~i~~fl~ 189 (190)
T PRK11071 172 HAF--VGFER------YFNQIVDFLG 189 (190)
T ss_pred cch--hhHHH------hHHHHHHHhc
Confidence 963 44444 6788888874
No 63
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.77 E-value=4.3e-17 Score=160.63 Aligned_cols=248 Identities=14% Similarity=0.086 Sum_probs=161.8
Q ss_pred CCCCCccEEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCC
Q 015401 79 LPDVKLKRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPV 158 (407)
Q Consensus 79 ~~~~~~~r~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~ 158 (407)
......+...+...||.++......|.+......-|+||++||.+.......+......+..+||.|+.+|+||.++-..
T Consensus 360 ~~~~~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~ 439 (620)
T COG1506 360 VKLAEPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGR 439 (620)
T ss_pred cccCCceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHH
Confidence 44556678888999999888776666532111224899999998654443234566677889999999999998765321
Q ss_pred C----CCCcccCCChhHHHHHHHHHHhhCC---CCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHH
Q 015401 159 T----TPQFYSASFLGDMQEVVAHVGSKYP---KAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQD 231 (407)
Q Consensus 159 ~----~~~~~~~~~~~Dl~~~l~~l~~~~~---~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~ 231 (407)
. ...-......+|+.+.++.+... | ..++.++|+|+||++++..+...+ . +++++...++.+-......
T Consensus 440 ~F~~~~~~~~g~~~~~D~~~~~~~l~~~-~~~d~~ri~i~G~SyGGymtl~~~~~~~-~--f~a~~~~~~~~~~~~~~~~ 515 (620)
T COG1506 440 EFADAIRGDWGGVDLEDLIAAVDALVKL-PLVDPERIGITGGSYGGYMTLLAATKTP-R--FKAAVAVAGGVDWLLYFGE 515 (620)
T ss_pred HHHHhhhhccCCccHHHHHHHHHHHHhC-CCcChHHeEEeccChHHHHHHHHHhcCc-h--hheEEeccCcchhhhhccc
Confidence 1 11123345678999999966543 3 348999999999999999999998 4 8888887765431110000
Q ss_pred HhcchhHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHhcCCCHHHHhhccccccCCCCCHHHHHhhCCcchhcCCCc
Q 015401 232 FRKGFNIVYDKALASALCRIFKKHALLFEDMGGEFNIPLAANAKSVRQFDDGLTRVSFGFKSVDDYYSNSSSSDSIKHVR 311 (407)
Q Consensus 232 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 311 (407)
... ... ....+. ... .....+.|...++.....+|+
T Consensus 516 ~~~----------------------~~~---------------~~~~~~---~~~----~~~~~~~~~~~sp~~~~~~i~ 551 (620)
T COG1506 516 STE----------------------GLR---------------FDPEEN---GGG----PPEDREKYEDRSPIFYADNIK 551 (620)
T ss_pred cch----------------------hhc---------------CCHHHh---CCC----cccChHHHHhcChhhhhcccC
Confidence 000 000 000000 000 000245667778888999999
Q ss_pred cceeeeecCCCCCCCCCCCC---hhHHhcCCCeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHHHH
Q 015401 312 IPLLCIQAQNDPIAPSRGIP---CEDIKANPNCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEHLE 379 (407)
Q Consensus 312 ~Pvlii~g~~D~~~~~~~~~---~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~~~ 379 (407)
+|+|+|||++|..|+.+... ..+......++++++|+.||..-- ++. ..-+.+.+.+|+++..
T Consensus 552 ~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~--~~~---~~~~~~~~~~~~~~~~ 617 (620)
T COG1506 552 TPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSR--PEN---RVKVLKEILDWFKRHL 617 (620)
T ss_pred CCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCC--chh---HHHHHHHHHHHHHHHh
Confidence 99999999999999988653 244556788999999999995433 442 1113455666666543
No 64
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.76 E-value=4.9e-18 Score=136.60 Aligned_cols=144 Identities=24% Similarity=0.417 Sum_probs=109.5
Q ss_pred EEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhh-CCCCcEEEEEe
Q 015401 115 VLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSK-YPKAHLYAVGW 193 (407)
Q Consensus 115 ~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~-~~~~~v~lvG~ 193 (407)
+||++||++++.. .| ..+...+.++||.|+++|+||+|.+.. .+++.++++.+... ....+++++||
T Consensus 1 ~vv~~HG~~~~~~-~~-~~~~~~l~~~G~~v~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~i~l~G~ 68 (145)
T PF12695_consen 1 VVVLLHGWGGSRR-DY-QPLAEALAEQGYAVVAFDYPGHGDSDG----------ADAVERVLADIRAGYPDPDRIILIGH 68 (145)
T ss_dssp EEEEECTTTTTTH-HH-HHHHHHHHHTTEEEEEESCTTSTTSHH----------SHHHHHHHHHHHHHHCTCCEEEEEEE
T ss_pred CEEEECCCCCCHH-HH-HHHHHHHHHCCCEEEEEecCCCCccch----------hHHHHHHHHHHHhhcCCCCcEEEEEE
Confidence 5999999987644 44 688889999999999999999998732 23677777776332 24569999999
Q ss_pred chhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHhc
Q 015401 194 SLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNIVYDKALASALCRIFKKHALLFEDMGGEFNIPLAAN 273 (407)
Q Consensus 194 S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (407)
|+||.+++.++.++ .+ ++++|++++..+
T Consensus 69 S~Gg~~a~~~~~~~-~~--v~~~v~~~~~~~------------------------------------------------- 96 (145)
T PF12695_consen 69 SMGGAIAANLAARN-PR--VKAVVLLSPYPD------------------------------------------------- 96 (145)
T ss_dssp THHHHHHHHHHHHS-TT--ESEEEEESESSG-------------------------------------------------
T ss_pred ccCcHHHHHHhhhc-cc--eeEEEEecCccc-------------------------------------------------
Confidence 99999999999988 44 999999886110
Q ss_pred CCCHHHHhhccccccCCCCCHHHHHhhCCcchhcCCCccceeeeecCCCCCCCCCCCChhHHhcCCCeEEEEcCCCCce
Q 015401 274 AKSVRQFDDGLTRVSFGFKSVDDYYSNSSSSDSIKHVRIPLLCIQAQNDPIAPSRGIPCEDIKANPNCLLILTPKGGHL 352 (407)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 352 (407)
...+...++|+++++|++|.+++.+...+...+...+.++.++++++|.
T Consensus 97 ------------------------------~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 97 ------------------------------SEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp ------------------------------CHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred ------------------------------hhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 1234456779999999999999887663333444467999999999994
No 65
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.76 E-value=2.3e-17 Score=143.99 Aligned_cols=130 Identities=14% Similarity=0.085 Sum_probs=98.1
Q ss_pred EEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCcc--HHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCccc
Q 015401 88 CIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSED--SYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYS 165 (407)
Q Consensus 88 ~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~--~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~ 165 (407)
+++.+.|..+...+.+.+ ...+|+||++||+++.... ..+..++..|.+.||+|+++|+||||.|+........
T Consensus 4 ~l~~~~g~~~~~~~~p~~----~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~~ 79 (266)
T TIGR03101 4 FLDAPHGFRFCLYHPPVA----VGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAARW 79 (266)
T ss_pred EecCCCCcEEEEEecCCC----CCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCCH
Confidence 455566665554443332 1246899999998754321 2234567788889999999999999999754444455
Q ss_pred CCChhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCC
Q 015401 166 ASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (407)
Q Consensus 166 ~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~ 224 (407)
..+.+|+.+++++++.. +..+++++||||||.+++.++.++|+. ++++|++++...
T Consensus 80 ~~~~~Dv~~ai~~L~~~-~~~~v~LvG~SmGG~vAl~~A~~~p~~--v~~lVL~~P~~~ 135 (266)
T TIGR03101 80 DVWKEDVAAAYRWLIEQ-GHPPVTLWGLRLGALLALDAANPLAAK--CNRLVLWQPVVS 135 (266)
T ss_pred HHHHHHHHHHHHHHHhc-CCCCEEEEEECHHHHHHHHHHHhCccc--cceEEEeccccc
Confidence 66789999999998875 456899999999999999999999988 999999987553
No 66
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.76 E-value=3.3e-17 Score=131.54 Aligned_cols=220 Identities=14% Similarity=0.195 Sum_probs=146.1
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEE
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAV 191 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lv 191 (407)
+..+||++||+-.+....++..++..+.+.|+.++.+|++|.|.|+.....-.....++|+..+++++... ...--+++
T Consensus 32 s~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~-nr~v~vi~ 110 (269)
T KOG4667|consen 32 STEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNS-NRVVPVIL 110 (269)
T ss_pred CceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccC-ceEEEEEE
Confidence 67899999999888877788888999999999999999999999986544433455679999999999874 11133789
Q ss_pred EechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHH-HHhcchhHHHHHHHHHHHHHHHHHHHhhhhhcC--CCCCH
Q 015401 192 GWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQ-DFRKGFNIVYDKALASALCRIFKKHALLFEDMG--GEFNI 268 (407)
Q Consensus 192 G~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~ 268 (407)
|||-||.+++.||.++.+ +.-+|.+++-+++...-. .+... .+. + ... ..++..-+ +.+
T Consensus 111 gHSkGg~Vvl~ya~K~~d---~~~viNcsGRydl~~~I~eRlg~~-------~l~----~-ike-~Gfid~~~rkG~y-- 172 (269)
T KOG4667|consen 111 GHSKGGDVVLLYASKYHD---IRNVINCSGRYDLKNGINERLGED-------YLE----R-IKE-QGFIDVGPRKGKY-- 172 (269)
T ss_pred eecCccHHHHHHHHhhcC---chheEEcccccchhcchhhhhccc-------HHH----H-HHh-CCceecCcccCCc--
Confidence 999999999999999998 778888887765432110 11000 000 0 000 00000000 000
Q ss_pred HHHhcCCCHHHHhhccccccCCCCCHHHHHhhCCcchhcCCC--ccceeeeecCCCCCCCCCCCChhHHhcCCCeEEEEc
Q 015401 269 PLAANAKSVRQFDDGLTRVSFGFKSVDDYYSNSSSSDSIKHV--RIPLLCIQAQNDPIAPSRGIPCEDIKANPNCLLILT 346 (407)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i--~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 346 (407)
......+++. +.-..+..+...+| +||||-+||..|.++|.+.+ .++++..|+.++.++
T Consensus 173 ~~rvt~eSlm------------------drLntd~h~aclkId~~C~VLTvhGs~D~IVPve~A-kefAk~i~nH~L~iI 233 (269)
T KOG4667|consen 173 GYRVTEESLM------------------DRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDA-KEFAKIIPNHKLEII 233 (269)
T ss_pred CceecHHHHH------------------HHHhchhhhhhcCcCccCceEEEeccCCceeechhH-HHHHHhccCCceEEe
Confidence 0000011111 11222333444445 59999999999999999987 688899999999999
Q ss_pred CCCCceeecCCCCCCCCCCCcHHHHHHHHH
Q 015401 347 PKGGHLGWVAGPEAPFGSPWTDPVVMDFLE 376 (407)
Q Consensus 347 ~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~ 376 (407)
+++.|.....+. + .......|..
T Consensus 234 EgADHnyt~~q~-~------l~~lgl~f~k 256 (269)
T KOG4667|consen 234 EGADHNYTGHQS-Q------LVSLGLEFIK 256 (269)
T ss_pred cCCCcCccchhh-h------HhhhcceeEE
Confidence 999997433332 2 4555555554
No 67
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.74 E-value=2.7e-17 Score=171.04 Aligned_cols=256 Identities=14% Similarity=0.217 Sum_probs=141.6
Q ss_pred CCCcEEEEeCCCCCCCccHHHHH-----HHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHH---hh
Q 015401 111 PDSPVLILMPGLTGGSEDSYVRH-----MLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVG---SK 182 (407)
Q Consensus 111 ~~~p~vv~lHG~~g~~~~~~~~~-----~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~---~~ 182 (407)
..+++|||+||+..+.. .| .. ++..|.++||+|+++|+ |.++..... ....+.+++..+++.+. ..
T Consensus 65 ~~~~plllvhg~~~~~~-~~-d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~-~~~~l~~~i~~l~~~l~~v~~~ 138 (994)
T PRK07868 65 PVGPPVLMVHPMMMSAD-MW-DVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGG-MERNLADHVVALSEAIDTVKDV 138 (994)
T ss_pred CCCCcEEEECCCCCCcc-ce-ecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcC-ccCCHHHHHHHHHHHHHHHHHh
Confidence 36789999999866443 33 21 36778899999999995 555433221 22444555555555543 22
Q ss_pred CCCCcEEEEEechhHHHHHHHHhcc-CCCCCceeEEEEcCCCCHHHHHH-H----H-hc--ch-----------hHHHHH
Q 015401 183 YPKAHLYAVGWSLGANILIRYLGHE-SHSCPLSGAVSLCNPFNLVIADQ-D----F-RK--GF-----------NIVYDK 242 (407)
Q Consensus 183 ~~~~~v~lvG~S~Gg~ia~~~a~~~-p~~~~v~~~v~l~~p~~~~~~~~-~----~-~~--~~-----------~~~~~~ 242 (407)
. ..+++++||||||.+++.+++.+ +++ |+++|++++|.|...... . + .. .+ ......
T Consensus 139 ~-~~~v~lvG~s~GG~~a~~~aa~~~~~~--v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 215 (994)
T PRK07868 139 T-GRDVHLVGYSQGGMFCYQAAAYRRSKD--IASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMAR 215 (994)
T ss_pred h-CCceEEEEEChhHHHHHHHHHhcCCCc--cceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHH
Confidence 2 34899999999999999998755 456 999999998876422100 0 0 00 00 000000
Q ss_pred HHHHHHHH--HHHHHHhhhhhcCCCCCHHHHhcCCCHHHHhhcc---ccccCCCCCH-HHHHhhCC----------cchh
Q 015401 243 ALASALCR--IFKKHALLFEDMGGEFNIPLAANAKSVRQFDDGL---TRVSFGFKSV-DDYYSNSS----------SSDS 306 (407)
Q Consensus 243 ~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~----------~~~~ 306 (407)
.....+.. ........+.... +.+.....+....+.... ..+...+... ..++.... ....
T Consensus 216 ~~~~~l~p~~~~~~~~~~~~~l~---~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~ 292 (994)
T PRK07868 216 TGFQMLDPVKTAKARVDFLRQLH---DREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAINGQMVT 292 (994)
T ss_pred HHHHhcChhHHHHHHHHHHHhcC---chhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEECCEEcc
Confidence 00000000 0111111111111 000110001111111000 0000000001 11111100 1125
Q ss_pred cCCCccceeeeecCCCCCCCCCCCChhHHhcCCCeEE-EEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHHHHHhc
Q 015401 307 IKHVRIPLLCIQAQNDPIAPSRGIPCEDIKANPNCLL-ILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEHLERAS 382 (407)
Q Consensus 307 l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~~~~~~ 382 (407)
+.+|++|+|+|+|++|++++++.. +.+.+..++.++ .+++++||++++-.... ....| ..|.+||++.....
T Consensus 293 L~~i~~P~L~i~G~~D~ivp~~~~-~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a-~~~~w--p~i~~wl~~~~~~~ 365 (994)
T PRK07868 293 LADITCPVLAFVGEVDDIGQPASV-RGIRRAAPNAEVYESLIRAGHFGLVVGSRA-AQQTW--PTVADWVKWLEGDG 365 (994)
T ss_pred hhhCCCCEEEEEeCCCCCCCHHHH-HHHHHhCCCCeEEEEeCCCCCEeeeechhh-hhhhC--hHHHHHHHHhccCC
Confidence 889999999999999999999876 566778899987 67789999999887765 23455 89999999875433
No 68
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.73 E-value=1.4e-16 Score=126.09 Aligned_cols=187 Identities=19% Similarity=0.277 Sum_probs=138.0
Q ss_pred EEEEEeecCCCCCCCCCCcEEEEeCC---CCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHH
Q 015401 96 SVALDWISGDHQLLPPDSPVLILMPG---LTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDM 172 (407)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~p~vv~lHG---~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl 172 (407)
.+...+.+++ .+..|+.|++|. ++|+.....+..++..+.+.||.++.+|+||.|+|.+..+. -..-.+|.
T Consensus 15 ~le~~~~~~~----~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~--GiGE~~Da 88 (210)
T COG2945 15 RLEGRYEPAK----TPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDN--GIGELEDA 88 (210)
T ss_pred cceeccCCCC----CCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccC--CcchHHHH
Confidence 4544544443 247899999996 44555555667788889999999999999999999865432 34558999
Q ss_pred HHHHHHHHhhCCCCcE-EEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchhHHHHHHHHHHHHHH
Q 015401 173 QEVVAHVGSKYPKAHL-YAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNIVYDKALASALCRI 251 (407)
Q Consensus 173 ~~~l~~l~~~~~~~~v-~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 251 (407)
.++++|++.++|..+. .+.|+|+|++|++.+|.+.|+ ....+.+.++...
T Consensus 89 ~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e---~~~~is~~p~~~~-------------------------- 139 (210)
T COG2945 89 AAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPE---ILVFISILPPINA-------------------------- 139 (210)
T ss_pred HHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhccc---ccceeeccCCCCc--------------------------
Confidence 9999999999998877 789999999999999999988 5666766665420
Q ss_pred HHHHHhhhhhcCCCCCHHHHhcCCCHHHHhhccccccCCCCCHHHHHhhCCcchhcCCCccceeeeecCCCCCCCCCCCC
Q 015401 252 FKKHALLFEDMGGEFNIPLAANAKSVRQFDDGLTRVSFGFKSVDDYYSNSSSSDSIKHVRIPLLCIQAQNDPIAPSRGIP 331 (407)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~ 331 (407)
++ ...+....+|.++|+|+.|.+++.....
T Consensus 140 ----------------------------~d----------------------fs~l~P~P~~~lvi~g~~Ddvv~l~~~l 169 (210)
T COG2945 140 ----------------------------YD----------------------FSFLAPCPSPGLVIQGDADDVVDLVAVL 169 (210)
T ss_pred ----------------------------hh----------------------hhhccCCCCCceeEecChhhhhcHHHHH
Confidence 00 0123445789999999999988876542
Q ss_pred hhHHhcCCCeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHH
Q 015401 332 CEDIKANPNCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLE 376 (407)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~ 376 (407)
.. +..-..+++++++++|+.+-. -.. +.+.+.+|+.
T Consensus 170 -~~-~~~~~~~~i~i~~a~HFF~gK-l~~------l~~~i~~~l~ 205 (210)
T COG2945 170 -KW-QESIKITVITIPGADHFFHGK-LIE------LRDTIADFLE 205 (210)
T ss_pred -Hh-hcCCCCceEEecCCCceeccc-HHH------HHHHHHHHhh
Confidence 22 233566788899999974443 333 7888888885
No 69
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.73 E-value=1.2e-16 Score=133.54 Aligned_cols=286 Identities=17% Similarity=0.258 Sum_probs=158.4
Q ss_pred ccchhhhccccCCCCcCCCCCCChhhHHHHHHhhhcCCCCCCccEEEEEcCCCC-EEEEEeecCCCCCCCCCCcEEEEeC
Q 015401 42 LHTFLPALKTLSRPYSPFPVIGWNCHVETIFAAFFRSLPDVKLKRECIRTKDDG-SVALDWISGDHQLLPPDSPVLILMP 120 (407)
Q Consensus 42 ~~~~~~~~~~l~~~y~p~p~~~~~~~~qt~~~~~~~~~~~~~~~r~~~~~~dg~-~~~~~~~~~~~~~~~~~~p~vv~lH 120 (407)
.+.+-+.-+...+.|.|.|| . .+|..... +..+++. ++..++..+. ...+|.++++|
T Consensus 24 ~~~~~~~~~~~~re~S~~pW--s---------~yFdeked-------v~i~~~~~t~n~Y~t~~~----~t~gpil~l~H 81 (343)
T KOG2564|consen 24 ARPLRPPSTGSSREYSPVPW--S---------DYFDEKED-------VSIDGSDLTFNVYLTLPS----ATEGPILLLLH 81 (343)
T ss_pred CCCCCCCCCCcccccCCCch--H---------Hhhccccc-------cccCCCcceEEEEEecCC----CCCccEEEEee
Confidence 33343333445678888885 2 24443332 2333222 3444433332 23789999999
Q ss_pred CCCCCCccHHHHHHHHHHHh-CCcEEEEEeCCCCCCCCCC-CCCcccCCChhHHHHHHHHHHhhCCCCcEEEEEechhHH
Q 015401 121 GLTGGSEDSYVRHMLLRARS-KGWRVVVFNSRGCGDSPVT-TPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGAN 198 (407)
Q Consensus 121 G~~g~~~~~~~~~~~~~l~~-~g~~vi~~D~rG~G~S~~~-~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ 198 (407)
|.+. +.-+| ..++..+.. -..+|+++|+||||.+... ...++.+.++.|+.++++.+-...+. +|++|||||||.
T Consensus 82 G~G~-S~LSf-A~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~~~-~iilVGHSmGGa 158 (343)
T KOG2564|consen 82 GGGS-SALSF-AIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGELPP-QIILVGHSMGGA 158 (343)
T ss_pred cCcc-cchhH-HHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccCCC-ceEEEeccccch
Confidence 9744 44344 556666543 4678999999999999643 34577889999999999988755443 799999999999
Q ss_pred HHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCH----------
Q 015401 199 ILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNIVYDKALASALCRIFKKHALLFEDMGGEFNI---------- 268 (407)
Q Consensus 199 ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---------- 268 (407)
++...|...--.+ +.|++++.-.=.. +-+. .+.+..++......++.+....+.
T Consensus 159 Iav~~a~~k~lps-l~Gl~viDVVEgt--AmeA-------------L~~m~~fL~~rP~~F~Si~~Ai~W~v~sg~~Rn~ 222 (343)
T KOG2564|consen 159 IAVHTAASKTLPS-LAGLVVIDVVEGT--AMEA-------------LNSMQHFLRNRPKSFKSIEDAIEWHVRSGQLRNR 222 (343)
T ss_pred hhhhhhhhhhchh-hhceEEEEEechH--HHHH-------------HHHHHHHHhcCCccccchhhHHHHHhcccccccc
Confidence 9988776542211 7888887532100 0000 011111111111111111100000
Q ss_pred --HHHhcCCCHHHHhh--ccccccCCCCCHHHHHhhC--CcchhcCCCccceeeeecCCCCCCCCCCCChhHHhcCCCeE
Q 015401 269 --PLAANAKSVRQFDD--GLTRVSFGFKSVDDYYSNS--SSSDSIKHVRIPLLCIQAQNDPIAPSRGIPCEDIKANPNCL 342 (407)
Q Consensus 269 --~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~ 342 (407)
........+..-++ .++ ........+.|+... ...+..-...+|-++|.+..|..-. + + ..-+-....+
T Consensus 223 ~SArVsmP~~~~~~~eGh~yv-wrtdL~kte~YW~gWF~gLS~~Fl~~p~~klLilAg~d~LDk-d-L--tiGQMQGk~Q 297 (343)
T KOG2564|consen 223 DSARVSMPSQLKQCEEGHCYV-WRTDLEKTEQYWKGWFKGLSDKFLGLPVPKLLILAGVDRLDK-D-L--TIGQMQGKFQ 297 (343)
T ss_pred ccceEecchheeeccCCCcEE-EEeeccccchhHHHHHhhhhhHhhCCCccceeEEecccccCc-c-e--eeeeecccee
Confidence 00000000000001 000 001112223333211 1223445567888888888776432 1 1 1223345578
Q ss_pred EEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHHHH
Q 015401 343 LILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEHLE 379 (407)
Q Consensus 343 ~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~~~ 379 (407)
+.+++.+||+.+-+.|.. ++..+..|+.+..
T Consensus 298 ~~vL~~~GH~v~ED~P~k------va~~~~~f~~Rn~ 328 (343)
T KOG2564|consen 298 LQVLPLCGHFVHEDSPHK------VAECLCVFWIRNR 328 (343)
T ss_pred eeeecccCceeccCCcch------HHHHHHHHHhhhc
Confidence 999999999999999998 9999999998764
No 70
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.71 E-value=2.1e-16 Score=154.36 Aligned_cols=133 Identities=14% Similarity=0.103 Sum_probs=102.5
Q ss_pred EEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCc--cHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccC
Q 015401 89 IRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSE--DSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSA 166 (407)
Q Consensus 89 ~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~--~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~ 166 (407)
|++.||..+..++..+.. ....|+||++||++.... ..+.......++++||.|+++|+||+|.|+.....+. .
T Consensus 1 i~~~DG~~L~~~~~~P~~---~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~-~ 76 (550)
T TIGR00976 1 VPMRDGTRLAIDVYRPAG---GGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLG-S 76 (550)
T ss_pred CcCCCCCEEEEEEEecCC---CCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEecC-c
Confidence 356789899887665542 236799999999875432 0122233456788999999999999999986543333 6
Q ss_pred CChhHHHHHHHHHHhh-CCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHH
Q 015401 167 SFLGDMQEVVAHVGSK-YPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVI 227 (407)
Q Consensus 167 ~~~~Dl~~~l~~l~~~-~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~ 227 (407)
..++|+.++++++..+ +.+.+++++|+|+||.+++.+|..+|.. ++++|..++..+...
T Consensus 77 ~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~--l~aiv~~~~~~d~~~ 136 (550)
T TIGR00976 77 DEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPA--LRAIAPQEGVWDLYR 136 (550)
T ss_pred ccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCc--eeEEeecCcccchhH
Confidence 7789999999999875 3346999999999999999999999888 999999888776543
No 71
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.68 E-value=2.4e-16 Score=139.42 Aligned_cols=244 Identities=19% Similarity=0.336 Sum_probs=130.8
Q ss_pred CcEEEEeCCCCCCCccHHHHHHHHHHHhC--CcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEE
Q 015401 113 SPVLILMPGLTGGSEDSYVRHMLLRARSK--GWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYA 190 (407)
Q Consensus 113 ~p~vv~lHG~~g~~~~~~~~~~~~~l~~~--g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~l 190 (407)
.|+|+++||+.++.. .|.. ....+... .|+++++|+||||.|. .. ......+++++..+++.+... ++++
T Consensus 21 ~~~i~~~hg~~~~~~-~~~~-~~~~~~~~~~~~~~~~~d~~g~g~s~-~~-~~~~~~~~~~~~~~~~~~~~~----~~~l 92 (282)
T COG0596 21 GPPLVLLHGFPGSSS-VWRP-VFKVLPALAARYRVIAPDLRGHGRSD-PA-GYSLSAYADDLAALLDALGLE----KVVL 92 (282)
T ss_pred CCeEEEeCCCCCchh-hhHH-HHHHhhccccceEEEEecccCCCCCC-cc-cccHHHHHHHHHHHHHHhCCC----ceEE
Confidence 558999999987665 4433 11122221 1999999999999997 11 122223377888888877765 6999
Q ss_pred EEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHH-----hcchhHHHHHH--H-HHHHHHHHHHHHhhhhhc
Q 015401 191 VGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDF-----RKGFNIVYDKA--L-ASALCRIFKKHALLFEDM 262 (407)
Q Consensus 191 vG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~-----~~~~~~~~~~~--~-~~~l~~~~~~~~~~~~~~ 262 (407)
+|||+||.+++.++.++|+. +.++++++++.......... ........... . ............ .....
T Consensus 93 ~G~S~Gg~~~~~~~~~~p~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 169 (282)
T COG0596 93 VGHSMGGAVALALALRHPDR--VRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAAFAALLAALG-LLAAL 169 (282)
T ss_pred EEecccHHHHHHHHHhcchh--hheeeEecCCCCcccccCccccCccccchhhhhhhhhccchhhhhhhhhccc-ccccc
Confidence 99999999999999999998 99999998764300000000 00000000000 0 000000000000 00000
Q ss_pred CCCCC--HHHHhcCCCHHHHhhccccccC-CCCC-HHHHHhhCCcchhcCCCccceeeeecCCCCCCCCCCCChhHHhcC
Q 015401 263 GGEFN--IPLAANAKSVRQFDDGLTRVSF-GFKS-VDDYYSNSSSSDSIKHVRIPLLCIQAQNDPIAPSRGIPCEDIKAN 338 (407)
Q Consensus 263 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~ 338 (407)
..... ...................... .... ....+.. ........+++|+++++|++|.+.+... ........
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~l~i~g~~d~~~~~~~-~~~~~~~~ 247 (282)
T COG0596 170 AAAARAGLAEALRAPLLGAAAAAFARAARADLAAALLALLDR-DLRAALARITVPTLIIHGEDDPVVPAEL-ARRLAAAL 247 (282)
T ss_pred cccchhccccccccccchhHhhhhhhhcccccchhhhccccc-ccchhhccCCCCeEEEecCCCCcCCHHH-HHHHHhhC
Confidence 00000 0000000000000000000000 0000 0000000 2234567788999999999996555443 24555666
Q ss_pred CC-eEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHH
Q 015401 339 PN-CLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFL 375 (407)
Q Consensus 339 ~~-~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl 375 (407)
++ .++++++++||..++++|+. +.+.+.+|+
T Consensus 248 ~~~~~~~~~~~~gH~~~~~~p~~------~~~~i~~~~ 279 (282)
T COG0596 248 PNDARLVVIPGAGHFPHLEAPEA------FAAALLAFL 279 (282)
T ss_pred CCCceEEEeCCCCCcchhhcHHH------HHHHHHHHH
Confidence 75 89999999999999999986 777777644
No 72
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.67 E-value=2.1e-16 Score=142.75 Aligned_cols=240 Identities=19% Similarity=0.235 Sum_probs=135.3
Q ss_pred CCccEEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCC
Q 015401 82 VKLKRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTP 161 (407)
Q Consensus 82 ~~~~r~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~ 161 (407)
...++..|..++ ..+......+.. ..+.|+||++-|+-+ ..+.++..+...+..+|+.++++|.||.|.|....
T Consensus 163 ~~i~~v~iP~eg-~~I~g~LhlP~~---~~p~P~VIv~gGlDs-~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~- 236 (411)
T PF06500_consen 163 YPIEEVEIPFEG-KTIPGYLHLPSG---EKPYPTVIVCGGLDS-LQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWP- 236 (411)
T ss_dssp SEEEEEEEEETT-CEEEEEEEESSS---SS-EEEEEEE--TTS--GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT--
T ss_pred CCcEEEEEeeCC-cEEEEEEEcCCC---CCCCCEEEEeCCcch-hHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCC-
Confidence 345777777776 567655444432 246688888888754 44344344445578899999999999999985322
Q ss_pred CcccCCChhHHHHHHHHHHhhC--CCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchhHH
Q 015401 162 QFYSASFLGDMQEVVAHVGSKY--PKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNIV 239 (407)
Q Consensus 162 ~~~~~~~~~Dl~~~l~~l~~~~--~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~~ 239 (407)
+. .+.-.-..++++++...- ...+|.++|.|+||++|.++|..++.+ |+++|.++++.+-...........+..
T Consensus 237 -l~-~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~R--lkavV~~Ga~vh~~ft~~~~~~~~P~m 312 (411)
T PF06500_consen 237 -LT-QDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPR--LKAVVALGAPVHHFFTDPEWQQRVPDM 312 (411)
T ss_dssp -S--S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT---SEEEEES---SCGGH-HHHHTTS-HH
T ss_pred -CC-cCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccc--eeeEeeeCchHhhhhccHHHHhcCCHH
Confidence 11 222233467788877642 235899999999999999999988888 999999999875544444444444444
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHhcCCCHHHHhhccccccCCCCCHHHHHhhCCcc--hhc--CCCcccee
Q 015401 240 YDKALASALCRIFKKHALLFEDMGGEFNIPLAANAKSVRQFDDGLTRVSFGFKSVDDYYSNSSSS--DSI--KHVRIPLL 315 (407)
Q Consensus 240 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l--~~i~~Pvl 315 (407)
+...++..+.... .....+...+ ...+.. ..+ .+.++|+|
T Consensus 313 y~d~LA~rlG~~~----------------------~~~~~l~~el--------------~~~SLk~qGlL~~rr~~~plL 356 (411)
T PF06500_consen 313 YLDVLASRLGMAA----------------------VSDESLRGEL--------------NKFSLKTQGLLSGRRCPTPLL 356 (411)
T ss_dssp HHHHHHHHCT-SC----------------------E-HHHHHHHG--------------GGGSTTTTTTTTSS-BSS-EE
T ss_pred HHHHHHHHhCCcc----------------------CCHHHHHHHH--------------HhcCcchhccccCCCCCcceE
Confidence 4333332221100 0000111000 111111 123 56689999
Q ss_pred eeecCCCCCCCCCCCChhHHhcCCCeEEEEcCCCC-ceeecCCCCCCCCCCCcHHHHHHHHHHH
Q 015401 316 CIQAQNDPIAPSRGIPCEDIKANPNCLLILTPKGG-HLGWVAGPEAPFGSPWTDPVVMDFLEHL 378 (407)
Q Consensus 316 ii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~g-H~~~~~~p~~~~~~~w~~~~i~~fl~~~ 378 (407)
.+++++|+++|.+.. +.+.....+.+...++... |.++-. ....+.+||+..
T Consensus 357 ~i~~~~D~v~P~eD~-~lia~~s~~gk~~~~~~~~~~~gy~~----------al~~~~~Wl~~~ 409 (411)
T PF06500_consen 357 AINGEDDPVSPIEDS-RLIAESSTDGKALRIPSKPLHMGYPQ----------ALDEIYKWLEDK 409 (411)
T ss_dssp EEEETT-SSS-HHHH-HHHHHTBTT-EEEEE-SSSHHHHHHH----------HHHHHHHHHHHH
T ss_pred EeecCCCCCCCHHHH-HHHHhcCCCCceeecCCCccccchHH----------HHHHHHHHHHHh
Confidence 999999999998875 4556666667777777555 655432 456788888764
No 73
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.67 E-value=5.8e-17 Score=139.24 Aligned_cols=195 Identities=19% Similarity=0.250 Sum_probs=119.4
Q ss_pred HHHHHHHhCCcEEEEEeCCCCCCCCCC----CCCcccCCChhHHHHHHHHHHhhC--CCCcEEEEEechhHHHHHHHHhc
Q 015401 133 HMLLRARSKGWRVVVFNSRGCGDSPVT----TPQFYSASFLGDMQEVVAHVGSKY--PKAHLYAVGWSLGANILIRYLGH 206 (407)
Q Consensus 133 ~~~~~l~~~g~~vi~~D~rG~G~S~~~----~~~~~~~~~~~Dl~~~l~~l~~~~--~~~~v~lvG~S~Gg~ia~~~a~~ 206 (407)
.....+.++||.|+.+|+||.++.... .....-....+|+.++++++..+. ...++.++|+|+||.+++.++.+
T Consensus 5 ~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~ 84 (213)
T PF00326_consen 5 WNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQ 84 (213)
T ss_dssp HHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcc
Confidence 344567799999999999998854311 011111234788999999998764 24599999999999999999999
Q ss_pred cCCCCCceeEEEEcCCCCHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHhcCCCHHHHhhcccc
Q 015401 207 ESHSCPLSGAVSLCNPFNLVIADQDFRKGFNIVYDKALASALCRIFKKHALLFEDMGGEFNIPLAANAKSVRQFDDGLTR 286 (407)
Q Consensus 207 ~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (407)
+|+. +++++..++..+.......... +.. . .......
T Consensus 85 ~~~~--f~a~v~~~g~~d~~~~~~~~~~-----~~~------------~--~~~~~~~---------------------- 121 (213)
T PF00326_consen 85 HPDR--FKAAVAGAGVSDLFSYYGTTDI-----YTK------------A--EYLEYGD---------------------- 121 (213)
T ss_dssp TCCG--SSEEEEESE-SSTTCSBHHTCC-----HHH------------G--HHHHHSS----------------------
T ss_pred ccee--eeeeeccceecchhcccccccc-----ccc------------c--cccccCc----------------------
Confidence 9998 9999999887653221110000 000 0 0000000
Q ss_pred ccCCCCCHHHHHhhCCcchhcCC--CccceeeeecCCCCCCCCCCCC---hhHHhcCCCeEEEEcCCCCceeecCCCCCC
Q 015401 287 VSFGFKSVDDYYSNSSSSDSIKH--VRIPLLCIQAQNDPIAPSRGIP---CEDIKANPNCLLILTPKGGHLGWVAGPEAP 361 (407)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~l~~--i~~Pvlii~g~~D~~~~~~~~~---~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~ 361 (407)
... ..+.|...+....+.+ +++|+|++||++|..||++... ..+.+...++++.++|++||. +..++..
T Consensus 122 ---~~~-~~~~~~~~s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~--~~~~~~~ 195 (213)
T PF00326_consen 122 ---PWD-NPEFYRELSPISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHG--FGNPENR 195 (213)
T ss_dssp ---TTT-SHHHHHHHHHGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSS--TTSHHHH
T ss_pred ---cch-hhhhhhhhccccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCC--CCCchhH
Confidence 000 1122223333344455 7899999999999999987542 245556677999999999993 2222210
Q ss_pred CCCCCcHHHHHHHHHHHH
Q 015401 362 FGSPWTDPVVMDFLEHLE 379 (407)
Q Consensus 362 ~~~~w~~~~i~~fl~~~~ 379 (407)
. -..+.+.+||++..
T Consensus 196 --~-~~~~~~~~f~~~~l 210 (213)
T PF00326_consen 196 --R-DWYERILDFFDKYL 210 (213)
T ss_dssp --H-HHHHHHHHHHHHHT
T ss_pred --H-HHHHHHHHHHHHHc
Confidence 0 15667778887654
No 74
>PLN02442 S-formylglutathione hydrolase
Probab=99.65 E-value=1.6e-14 Score=129.10 Aligned_cols=206 Identities=14% Similarity=0.174 Sum_probs=118.8
Q ss_pred CCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHHHH--HHHHHHHhCCcEEEEEeCCCCCC-----CCC----CCCC
Q 015401 94 DGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVR--HMLLRARSKGWRVVVFNSRGCGD-----SPV----TTPQ 162 (407)
Q Consensus 94 g~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~--~~~~~l~~~g~~vi~~D~rG~G~-----S~~----~~~~ 162 (407)
|..+.+..+.|+. ......|+|+++||+.++.. .|.. .+...+...|+.|+++|..++|. +.. ....
T Consensus 29 ~~~~~~~vy~P~~-~~~~~~Pvv~~lHG~~~~~~-~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~ 106 (283)
T PLN02442 29 GCSMTFSVYFPPA-SDSGKVPVLYWLSGLTCTDE-NFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAG 106 (283)
T ss_pred CCceEEEEEcCCc-ccCCCCCEEEEecCCCcChH-HHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcc
Confidence 4455554333331 12236799999999877553 4422 22344556799999999887661 110 0000
Q ss_pred cc-------------cCCChhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHH
Q 015401 163 FY-------------SASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIAD 229 (407)
Q Consensus 163 ~~-------------~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~ 229 (407)
.+ .....+++...++.........+++++||||||..++.++.++|+. +++++.+++..+.....
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~--~~~~~~~~~~~~~~~~~ 184 (283)
T PLN02442 107 FYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDK--YKSVSAFAPIANPINCP 184 (283)
T ss_pred eeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchh--EEEEEEECCccCcccCc
Confidence 00 0112344544554443223445899999999999999999999998 99999988765422100
Q ss_pred HHHhcchhHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHhcCCCHHHHhhccccccCCCCCHHHHHhhCCcchhcCC
Q 015401 230 QDFRKGFNIVYDKALASALCRIFKKHALLFEDMGGEFNIPLAANAKSVRQFDDGLTRVSFGFKSVDDYYSNSSSSDSIKH 309 (407)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 309 (407)
.. . ..+... +.. +. ..+.+ +...+....+..
T Consensus 185 ------~~---~----~~~~~~-------~g~-----~~---------~~~~~---------------~d~~~~~~~~~~ 215 (283)
T PLN02442 185 ------WG---Q----KAFTNY-------LGS-----DK---------ADWEE---------------YDATELVSKFND 215 (283)
T ss_pred ------hh---h----HHHHHH-------cCC-----Ch---------hhHHH---------------cChhhhhhhccc
Confidence 00 0 000000 000 00 00000 011122234456
Q ss_pred CccceeeeecCCCCCCCCCC----CChhHHhcCCCeEEEEcCCCCce
Q 015401 310 VRIPLLCIQAQNDPIAPSRG----IPCEDIKANPNCLLILTPKGGHL 352 (407)
Q Consensus 310 i~~Pvlii~g~~D~~~~~~~----~~~~~~~~~~~~~~~~~~~~gH~ 352 (407)
.++|+++++|++|.+++... ..+.+.+...++++.++++++|.
T Consensus 216 ~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~ 262 (283)
T PLN02442 216 VSATILIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDHS 262 (283)
T ss_pred cCCCEEEEECCCCccccccccHHHHHHHHHHcCCCeEEEEeCCCCcc
Confidence 78999999999999988632 11344455667899999999995
No 75
>PRK11460 putative hydrolase; Provisional
Probab=99.62 E-value=5.7e-15 Score=127.90 Aligned_cols=177 Identities=14% Similarity=0.082 Sum_probs=111.9
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCC-CCC------cccCCC-------hhHHHHHH
Q 015401 111 PDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVT-TPQ------FYSASF-------LGDMQEVV 176 (407)
Q Consensus 111 ~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~-~~~------~~~~~~-------~~Dl~~~l 176 (407)
+.+|+||++||++++.. . +..++..+...++.+.+++.+|...+... ... .+.... .+.+.+.+
T Consensus 14 ~~~~~vIlLHG~G~~~~-~-~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i 91 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPV-A-MGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETV 91 (232)
T ss_pred CCCcEEEEEeCCCCChH-H-HHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHH
Confidence 36789999999977654 3 46777778777766677777775432110 000 011111 12233444
Q ss_pred HHHHhhC--CCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchhHHHHHHHHHHHHHHHHH
Q 015401 177 AHVGSKY--PKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNIVYDKALASALCRIFKK 254 (407)
Q Consensus 177 ~~l~~~~--~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 254 (407)
+.+..++ ...+++++|||+||.+++.++.++|+. +.+++.+++.+.
T Consensus 92 ~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~--~~~vv~~sg~~~------------------------------ 139 (232)
T PRK11460 92 RYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGL--AGRVIAFSGRYA------------------------------ 139 (232)
T ss_pred HHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCc--ceEEEEeccccc------------------------------
Confidence 4444443 235899999999999999999888886 666776653210
Q ss_pred HHhhhhhcCCCCCHHHHhcCCCHHHHhhccccccCCCCCHHHHHhhCCcchhcCCCccceeeeecCCCCCCCCCCCC---
Q 015401 255 HALLFEDMGGEFNIPLAANAKSVRQFDDGLTRVSFGFKSVDDYYSNSSSSDSIKHVRIPLLCIQAQNDPIAPSRGIP--- 331 (407)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~--- 331 (407)
.. .......+|++++||++|+++|.+...
T Consensus 140 ------~~------------------------------------------~~~~~~~~pvli~hG~~D~vvp~~~~~~~~ 171 (232)
T PRK11460 140 ------SL------------------------------------------PETAPTATTIHLIHGGEDPVIDVAHAVAAQ 171 (232)
T ss_pred ------cc------------------------------------------cccccCCCcEEEEecCCCCccCHHHHHHHH
Confidence 00 000113679999999999999987542
Q ss_pred hhHHhcCCCeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHHHH
Q 015401 332 CEDIKANPNCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEHLE 379 (407)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~~~ 379 (407)
..+.+...++++.+++++||...- . ..+.+.+||.+..
T Consensus 172 ~~L~~~g~~~~~~~~~~~gH~i~~--~--------~~~~~~~~l~~~l 209 (232)
T PRK11460 172 EALISLGGDVTLDIVEDLGHAIDP--R--------LMQFALDRLRYTV 209 (232)
T ss_pred HHHHHCCCCeEEEEECCCCCCCCH--H--------HHHHHHHHHHHHc
Confidence 233344567899999999996432 1 3466777776654
No 76
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.61 E-value=4.5e-15 Score=139.47 Aligned_cols=108 Identities=11% Similarity=0.163 Sum_probs=89.3
Q ss_pred CCCcEEEEeCCCCCCCccHHH------HHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCC
Q 015401 111 PDSPVLILMPGLTGGSEDSYV------RHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYP 184 (407)
Q Consensus 111 ~~~p~vv~lHG~~g~~~~~~~------~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~ 184 (407)
..+.+||+++.+- +..|+ +.+++.++++||+|+++|+++-+... ....++++++.+.++++.++...+
T Consensus 213 v~~~PLLIVPp~I---NK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~---r~~~ldDYv~~i~~Ald~V~~~tG 286 (560)
T TIGR01839 213 QHARPLLVVPPQI---NKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAH---REWGLSTYVDALKEAVDAVRAITG 286 (560)
T ss_pred cCCCcEEEechhh---hhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhh---cCCCHHHHHHHHHHHHHHHHHhcC
Confidence 3567899999974 22443 46788999999999999999876553 345667788899999999998888
Q ss_pred CCcEEEEEechhHHHHHH----HHhccCC-CCCceeEEEEcCCCCHH
Q 015401 185 KAHLYAVGWSLGANILIR----YLGHESH-SCPLSGAVSLCNPFNLV 226 (407)
Q Consensus 185 ~~~v~lvG~S~Gg~ia~~----~a~~~p~-~~~v~~~v~l~~p~~~~ 226 (407)
..++.++|||+||.+++. |++++++ + |++++++.++.|..
T Consensus 287 ~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~--V~sltllatplDf~ 331 (560)
T TIGR01839 287 SRDLNLLGACAGGLTCAALVGHLQALGQLRK--VNSLTYLVSLLDST 331 (560)
T ss_pred CCCeeEEEECcchHHHHHHHHHHHhcCCCCc--eeeEEeeecccccC
Confidence 889999999999999997 7888875 6 99999999998865
No 77
>PRK10115 protease 2; Provisional
Probab=99.61 E-value=4.8e-14 Score=139.99 Aligned_cols=226 Identities=15% Similarity=0.172 Sum_probs=148.5
Q ss_pred CccEEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCC--
Q 015401 83 KLKRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTT-- 160 (407)
Q Consensus 83 ~~~r~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~-- 160 (407)
..++..++..||..|.+.++...+.......|+||++||..+.+....+......++++||.|+.++.||-|+-....
T Consensus 415 ~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~ 494 (686)
T PRK10115 415 RSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYE 494 (686)
T ss_pred EEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHH
Confidence 455666788999998875443221112345699999999887775444455556788999999999999976543210
Q ss_pred --CCcccCCChhHHHHHHHHHHhhC--CCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcch
Q 015401 161 --PQFYSASFLGDMQEVVAHVGSKY--PKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGF 236 (407)
Q Consensus 161 --~~~~~~~~~~Dl~~~l~~l~~~~--~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~ 236 (407)
....-....+|+.+++++|..+. ...++.++|.|.||.++..++.++|+. ++++|+..+..|+...... .
T Consensus 495 ~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdl--f~A~v~~vp~~D~~~~~~~--~-- 568 (686)
T PRK10115 495 DGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPEL--FHGVIAQVPFVDVVTTMLD--E-- 568 (686)
T ss_pred hhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhh--eeEEEecCCchhHhhhccc--C--
Confidence 11112245789999999997652 245999999999999999999999999 9999998877654321000 0
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHhcCCCHHHHhhccccccCCCCCHHHHHhhCCcchhcCCCccc-ee
Q 015401 237 NIVYDKALASALCRIFKKHALLFEDMGGEFNIPLAANAKSVRQFDDGLTRVSFGFKSVDDYYSNSSSSDSIKHVRIP-LL 315 (407)
Q Consensus 237 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vl 315 (407)
..+ ....++.. +..+. -....+|+...++...+.+++.| +|
T Consensus 569 ------------------------~~p-----------~~~~~~~e-~G~p~--~~~~~~~l~~~SP~~~v~~~~~P~lL 610 (686)
T PRK10115 569 ------------------------SIP-----------LTTGEFEE-WGNPQ--DPQYYEYMKSYSPYDNVTAQAYPHLL 610 (686)
T ss_pred ------------------------CCC-----------CChhHHHH-hCCCC--CHHHHHHHHHcCchhccCccCCCcee
Confidence 000 00000000 00000 01123455667888889999999 56
Q ss_pred eeecCCCCCCCCCCCCh---hHHhcCCCeEEEEc---CCCCce
Q 015401 316 CIQAQNDPIAPSRGIPC---EDIKANPNCLLILT---PKGGHL 352 (407)
Q Consensus 316 ii~g~~D~~~~~~~~~~---~~~~~~~~~~~~~~---~~~gH~ 352 (407)
+++|.+|+-|++....+ .+.+.....+++++ +++||.
T Consensus 611 i~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg 653 (686)
T PRK10115 611 VTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHG 653 (686)
T ss_pred EEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCC
Confidence 77999999999886533 33344455666777 899997
No 78
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.61 E-value=4.1e-14 Score=126.18 Aligned_cols=110 Identities=20% Similarity=0.264 Sum_probs=69.5
Q ss_pred CCcEEEEeCCCCCCCccHHHHH-HHHHH-HhCCcEEEEEeC--CCCCCCCCCC-------CCccc----------CCChh
Q 015401 112 DSPVLILMPGLTGGSEDSYVRH-MLLRA-RSKGWRVVVFNS--RGCGDSPVTT-------PQFYS----------ASFLG 170 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~-~~~~l-~~~g~~vi~~D~--rG~G~S~~~~-------~~~~~----------~~~~~ 170 (407)
+.|+|+++||++++.. .|... ....+ .+.||.|+++|. ||+|.+.... ..++. ..+.+
T Consensus 41 ~~P~vvllHG~~~~~~-~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~ 119 (275)
T TIGR02821 41 PVPVLWYLSGLTCTHE-NFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYS 119 (275)
T ss_pred CCCEEEEccCCCCCcc-HHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHH
Confidence 5799999999976554 44321 12233 356999999998 6665432110 00000 01112
Q ss_pred HH-HHHHHHHHhhC--CCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCC
Q 015401 171 DM-QEVVAHVGSKY--PKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (407)
Q Consensus 171 Dl-~~~l~~l~~~~--~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~ 224 (407)
.+ .++...+...+ ...+++++||||||.+++.++.++|+. +++++++++..+
T Consensus 120 ~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~--~~~~~~~~~~~~ 174 (275)
T TIGR02821 120 YIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDR--FKSVSAFAPIVA 174 (275)
T ss_pred HHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCccc--ceEEEEECCccC
Confidence 22 22222233322 235899999999999999999999998 999999887654
No 79
>PLN00021 chlorophyllase
Probab=99.61 E-value=3.6e-14 Score=127.42 Aligned_cols=103 Identities=18% Similarity=0.157 Sum_probs=75.1
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhh--------
Q 015401 111 PDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSK-------- 182 (407)
Q Consensus 111 ~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~-------- 182 (407)
...|+||++||++++.. .| ..++..+.+.||.|+++|++|++.+.. ....+|..++++++...
T Consensus 50 g~~PvVv~lHG~~~~~~-~y-~~l~~~Las~G~~VvapD~~g~~~~~~-------~~~i~d~~~~~~~l~~~l~~~l~~~ 120 (313)
T PLN00021 50 GTYPVLLFLHGYLLYNS-FY-SQLLQHIASHGFIVVAPQLYTLAGPDG-------TDEIKDAAAVINWLSSGLAAVLPEG 120 (313)
T ss_pred CCCCEEEEECCCCCCcc-cH-HHHHHHHHhCCCEEEEecCCCcCCCCc-------hhhHHHHHHHHHHHHhhhhhhcccc
Confidence 36799999999976543 44 677888889999999999998753311 12235566666666532
Q ss_pred --CCCCcEEEEEechhHHHHHHHHhccCCC---CCceeEEEEcCC
Q 015401 183 --YPKAHLYAVGWSLGANILIRYLGHESHS---CPLSGAVSLCNP 222 (407)
Q Consensus 183 --~~~~~v~lvG~S~Gg~ia~~~a~~~p~~---~~v~~~v~l~~p 222 (407)
....+++++||||||.+++.+|..+++. ..+.++|.+++.
T Consensus 121 ~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv 165 (313)
T PLN00021 121 VRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPV 165 (313)
T ss_pred cccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccc
Confidence 1125899999999999999999988753 237888887654
No 80
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.59 E-value=1.5e-14 Score=127.37 Aligned_cols=257 Identities=16% Similarity=0.183 Sum_probs=136.3
Q ss_pred CCcEEEEeCCCCCCCcc---------HHHHHHHHH---HHhCCcEEEEEeCCCCC-CCCCCCC---C--cccCCC----h
Q 015401 112 DSPVLILMPGLTGGSED---------SYVRHMLLR---ARSKGWRVVVFNSRGCG-DSPVTTP---Q--FYSASF----L 169 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~---------~~~~~~~~~---l~~~g~~vi~~D~rG~G-~S~~~~~---~--~~~~~~----~ 169 (407)
....|+++||++|+++. .||..++-. +--..|.||+.|..|.+ +|+.+.. . .+...+ +
T Consensus 50 ~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~ti 129 (368)
T COG2021 50 KDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVITI 129 (368)
T ss_pred CCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCcccH
Confidence 45689999999996532 154444321 33346999999999876 5543321 1 111111 2
Q ss_pred hHHHHHHHHHHhhCCCCcEE-EEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchhHHH--------
Q 015401 170 GDMQEVVAHVGSKYPKAHLY-AVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNIVY-------- 240 (407)
Q Consensus 170 ~Dl~~~l~~l~~~~~~~~v~-lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~~~-------- 240 (407)
+|...+-..+...++-+++. +||.||||+.++.++..+|++ |..+|.++++.....-...+....+...
T Consensus 130 ~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~--V~~~i~ia~~~r~s~~~ia~~~~~r~AI~~DP~~n~ 207 (368)
T COG2021 130 RDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDR--VRRAIPIATAARLSAQNIAFNEVQRQAIEADPDWNG 207 (368)
T ss_pred HHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHH--HhhhheecccccCCHHHHHHHHHHHHHHHhCCCccC
Confidence 33333333333334434776 999999999999999999999 9999999886643322222211110000
Q ss_pred -----------HHHHHHHHHHHHHHHHhhhh-hcCCCCCHHHHh---cCCCHHHHhhccccccCCCCCHHHH--------
Q 015401 241 -----------DKALASALCRIFKKHALLFE-DMGGEFNIPLAA---NAKSVRQFDDGLTRVSFGFKSVDDY-------- 297 (407)
Q Consensus 241 -----------~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-------- 297 (407)
--.+++.+..+.-.....+. .+......+... ....++.+.+........--+...|
T Consensus 208 G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~~rfDaNsYL~lt~ald 287 (368)
T COG2021 208 GDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKFVARFDANSYLYLTRALD 287 (368)
T ss_pred CCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHHHhccCcchHHHHHHHHH
Confidence 00011111111100000010 000000000000 0000111111111010000111111
Q ss_pred -Hh----hCCcchhcCCCccceeeeecCCCCCCCCCCCChhHHhcCCCeE-EEEc-CCCCceeecCCCCCCCCCCCcHHH
Q 015401 298 -YS----NSSSSDSIKHVRIPLLCIQAQNDPIAPSRGIPCEDIKANPNCL-LILT-PKGGHLGWVAGPEAPFGSPWTDPV 370 (407)
Q Consensus 298 -~~----~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~-~~~~-~~~gH~~~~~~p~~~~~~~w~~~~ 370 (407)
+. ..+....+.+|++|+|++.-+.|.+.|++.. +.+.+..+... +.++ ...||..|+...+. +.+.
T Consensus 288 ~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~-~~~~~~L~~~~~~~~i~S~~GHDaFL~e~~~------~~~~ 360 (368)
T COG2021 288 YHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQ-RALAEALPAAGALREIDSPYGHDAFLVESEA------VGPL 360 (368)
T ss_pred hcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHH-HHHHHhccccCceEEecCCCCchhhhcchhh------hhHH
Confidence 11 1233455889999999999999999999876 56666666655 6544 46799999988776 8899
Q ss_pred HHHHHHH
Q 015401 371 VMDFLEH 377 (407)
Q Consensus 371 i~~fl~~ 377 (407)
|..||+.
T Consensus 361 i~~fL~~ 367 (368)
T COG2021 361 IRKFLAL 367 (368)
T ss_pred HHHHhhc
Confidence 9999864
No 81
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.58 E-value=6.3e-14 Score=120.04 Aligned_cols=110 Identities=14% Similarity=0.150 Sum_probs=81.2
Q ss_pred CCCcEEEEeCCCCCCCccHHH--HHHHHHHHhCCcEEEEEeCCCCCCCCCCCCC------cccCCChhHHHHHHHHHHhh
Q 015401 111 PDSPVLILMPGLTGGSEDSYV--RHMLLRARSKGWRVVVFNSRGCGDSPVTTPQ------FYSASFLGDMQEVVAHVGSK 182 (407)
Q Consensus 111 ~~~p~vv~lHG~~g~~~~~~~--~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~------~~~~~~~~Dl~~~l~~l~~~ 182 (407)
...|+||++||.+++.. .+. ..+...+.+.||.|+++|++|++.+...... ........|+..+++.+..+
T Consensus 11 ~~~P~vv~lHG~~~~~~-~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 89 (212)
T TIGR01840 11 GPRALVLALHGCGQTAS-AYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKAN 89 (212)
T ss_pred CCCCEEEEeCCCCCCHH-HHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHh
Confidence 46799999999876543 332 1234445567999999999998765321100 11123567888999999887
Q ss_pred CC--CCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCC
Q 015401 183 YP--KAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (407)
Q Consensus 183 ~~--~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~ 223 (407)
++ ..+++++|||+||.+++.++.++|+. +.+++.++++.
T Consensus 90 ~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~--~~~~~~~~g~~ 130 (212)
T TIGR01840 90 YSIDPNRVYVTGLSAGGGMTAVLGCTYPDV--FAGGASNAGLP 130 (212)
T ss_pred cCcChhheEEEEECHHHHHHHHHHHhCchh--heEEEeecCCc
Confidence 64 34899999999999999999999998 99998888754
No 82
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.58 E-value=8.3e-15 Score=119.29 Aligned_cols=261 Identities=19% Similarity=0.227 Sum_probs=146.8
Q ss_pred EEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCC---cc
Q 015401 88 CIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQ---FY 164 (407)
Q Consensus 88 ~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~---~~ 164 (407)
.+..+||-.+..+..+.+. ..+-.|++-|.+|-.. .|.+.++..+.++||.|+.+|+||.|.|...... +.
T Consensus 9 ~l~~~DG~~l~~~~~pA~~-----~~~g~~~va~a~Gv~~-~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~ 82 (281)
T COG4757 9 HLPAPDGYSLPGQRFPADG-----KASGRLVVAGATGVGQ-YFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWR 82 (281)
T ss_pred ccccCCCccCccccccCCC-----CCCCcEEecccCCcch-hHhHHHHHHhhccCceEEEEecccccCCCccccccCccc
Confidence 4567788777666554442 3343555555556444 5668999999999999999999999999754433 33
Q ss_pred cCCC-hhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchhHHHHHH
Q 015401 165 SASF-LGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNIVYDKA 243 (407)
Q Consensus 165 ~~~~-~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~~~~~~ 243 (407)
..+| ..|+.++++.++...+..+.+.||||+||.+.- ++.+++. ..+..+.+....... -......+..+....
T Consensus 83 ~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~g-L~~~~~k---~~a~~vfG~gagwsg-~m~~~~~l~~~~l~~ 157 (281)
T COG4757 83 YLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALG-LLGQHPK---YAAFAVFGSGAGWSG-WMGLRERLGAVLLWN 157 (281)
T ss_pred hhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeec-ccccCcc---cceeeEecccccccc-chhhhhcccceeecc
Confidence 4444 359999999999988888999999999998664 4445553 444444432211000 000000000000000
Q ss_pred HHHHHHHHHH-HHHhhhhhcCCCCCHHHHhcCCCHHHHhhccccccCCCCCHHHHHhhCCcchhcCCCccceeeeecCCC
Q 015401 244 LASALCRIFK-KHALLFEDMGGEFNIPLAANAKSVRQFDDGLTRVSFGFKSVDDYYSNSSSSDSIKHVRIPLLCIQAQND 322 (407)
Q Consensus 244 ~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D 322 (407)
+......... .....+-.+. .......+++|.+....+..-+.+... ....+....+++|+..+...||
T Consensus 158 lv~p~lt~w~g~~p~~l~G~G------~d~p~~v~RdW~RwcR~p~y~fddp~~----~~~~q~yaaVrtPi~~~~~~DD 227 (281)
T COG4757 158 LVGPPLTFWKGYMPKDLLGLG------SDLPGTVMRDWARWCRHPRYYFDDPAM----RNYRQVYAAVRTPITFSRALDD 227 (281)
T ss_pred ccccchhhccccCcHhhcCCC------ccCcchHHHHHHHHhcCccccccChhH----hHHHHHHHHhcCceeeeccCCC
Confidence 0000000000 0000000111 011223345555544444332222211 1123566788999999999999
Q ss_pred CCCCCCCCChhHHhcCCCeEE--EEcCC----CCceeecCCCCCCCCCCCcHHHHHHHH
Q 015401 323 PIAPSRGIPCEDIKANPNCLL--ILTPK----GGHLGWVAGPEAPFGSPWTDPVVMDFL 375 (407)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~--~~~~~----~gH~~~~~~p~~~~~~~w~~~~i~~fl 375 (407)
+.+|+.+. +.+....+|+.+ ..++. -||++++.++-+ . +-+.+.+|+
T Consensus 228 ~w~P~As~-d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~E---a--lwk~~L~w~ 280 (281)
T COG4757 228 PWAPPASR-DAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFE---A--LWKEMLGWF 280 (281)
T ss_pred CcCCHHHH-HHHHHhhhcCcccceecCcccCcccchhhhccchH---H--HHHHHHHhh
Confidence 99999876 566666666543 44443 499999988833 1 335555554
No 83
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.57 E-value=2.9e-13 Score=114.86 Aligned_cols=126 Identities=17% Similarity=0.216 Sum_probs=95.4
Q ss_pred EEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCC-CcccCC
Q 015401 89 IRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTP-QFYSAS 167 (407)
Q Consensus 89 ~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~-~~~~~~ 167 (407)
+...+|..+.+.-...+..+.+++..+||-+||-+|+..+ ++.+...|.+.|+|+|.+|+||+|.++.... .++..+
T Consensus 11 ~~~~~~~~~~~~a~y~D~~~~gs~~gTVv~~hGsPGSH~D--FkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~e 88 (297)
T PF06342_consen 11 FQAENGKIVTVQAVYEDSLPSGSPLGTVVAFHGSPGSHND--FKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEE 88 (297)
T ss_pred cccccCceEEEEEEEEecCCCCCCceeEEEecCCCCCccc--hhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHH
Confidence 3445666666552222211122345699999999998775 5778888999999999999999999976543 355566
Q ss_pred ChhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCC
Q 015401 168 FLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (407)
Q Consensus 168 ~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~ 223 (407)
...-+.++++.|..+ .+++++|||.||-.|+.++..+| ..++++++++-
T Consensus 89 r~~~~~~ll~~l~i~---~~~i~~gHSrGcenal~la~~~~----~~g~~lin~~G 137 (297)
T PF06342_consen 89 RQNFVNALLDELGIK---GKLIFLGHSRGCENALQLAVTHP----LHGLVLINPPG 137 (297)
T ss_pred HHHHHHHHHHHcCCC---CceEEEEeccchHHHHHHHhcCc----cceEEEecCCc
Confidence 677788888888876 48999999999999999999996 66999998753
No 84
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.57 E-value=2.3e-14 Score=124.33 Aligned_cols=254 Identities=19% Similarity=0.282 Sum_probs=99.6
Q ss_pred CEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCcc-HHHHHHHHHHHhCCcEEEEEeCC----CCCCCCCCCCCcccCCCh
Q 015401 95 GSVALDWISGDHQLLPPDSPVLILMPGLTGGSED-SYVRHMLLRARSKGWRVVVFNSR----GCGDSPVTTPQFYSASFL 169 (407)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~-~~~~~~~~~l~~~g~~vi~~D~r----G~G~S~~~~~~~~~~~~~ 169 (407)
...++.+..... ...-.||||.|++.+... .|+..++..+...+|.++-+.++ |+|.++ .+..+
T Consensus 19 ~~~afe~~~~~~----~~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~S-------L~~D~ 87 (303)
T PF08538_consen 19 KLVAFEFTSSSS----SAPNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSS-------LDRDV 87 (303)
T ss_dssp TTEEEEEEEE-T----TSSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S---------HHHHH
T ss_pred CCeEEEecCCCC----CCCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcch-------hhhHH
Confidence 346666665442 145689999999876543 68888988887789999999876 344332 45558
Q ss_pred hHHHHHHHHHHhhC----CCCcEEEEEechhHHHHHHHHhccCC---CCCceeEEEEcCCCCHHHHHHHHhcchhHHHHH
Q 015401 170 GDMQEVVAHVGSKY----PKAHLYAVGWSLGANILIRYLGHESH---SCPLSGAVSLCNPFNLVIADQDFRKGFNIVYDK 242 (407)
Q Consensus 170 ~Dl~~~l~~l~~~~----~~~~v~lvG~S~Gg~ia~~~a~~~p~---~~~v~~~v~l~~p~~~~~~~~~~~~~~~~~~~~ 242 (407)
+|+.+++++++... ...+|+|+|||.|+.-++.|+..... +..|+++|+-++..|...... ....
T Consensus 88 ~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~--------~~~~ 159 (303)
T PF08538_consen 88 EEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILN--------FLGE 159 (303)
T ss_dssp HHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTT--------SHHH
T ss_pred HHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhh--------cccc
Confidence 99999999999873 45699999999999999999987643 345999999887655322111 0000
Q ss_pred HHHHHHHHHHHHHHhhhhh-cCCC-CCHHHH-----hcCCCHHHHhhccccccCCCCCHHHHHh----hCCcchhcCCCc
Q 015401 243 ALASALCRIFKKHALLFED-MGGE-FNIPLA-----ANAKSVRQFDDGLTRVSFGFKSVDDYYS----NSSSSDSIKHVR 311 (407)
Q Consensus 243 ~~~~~l~~~~~~~~~~~~~-~~~~-~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~i~ 311 (407)
...+.+........... .... ...... ...-+-..|..... ....++||. .......+..|+
T Consensus 160 --~~~~~~~v~~A~~~i~~g~~~~~lp~~~~~~~~~~~PiTA~Rf~SL~s-----~~gdDD~FSSDL~de~l~~tfG~v~ 232 (303)
T PF08538_consen 160 --REAYEELVALAKELIAEGKGDEILPREFTPLVFYDTPITAYRFLSLAS-----PGGDDDYFSSDLSDERLKKTFGKVS 232 (303)
T ss_dssp -----HHHHHHHHHHHHHCT-TT-GG----GGTTT-SS---HHHHHT-S------SSHHHHTHHHHHTT-HHHHTGGG--
T ss_pred --hHHHHHHHHHHHHHHHcCCCCceeeccccccccCCCcccHHHHHhccC-----CCCcccccCCCCCHHHHHHHhccCC
Confidence 00111111111111100 0000 000000 01112222221111 112233332 222345678888
Q ss_pred cceeeeecCCCCCCCCCCCChhHHhcCC--------CeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHH
Q 015401 312 IPLLCIQAQNDPIAPSRGIPCEDIKANP--------NCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLE 376 (407)
Q Consensus 312 ~Pvlii~g~~D~~~~~~~~~~~~~~~~~--------~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~ 376 (407)
+|+|++.+++|..+|...-.+.+.+... ...-.++|++.|. ++++.+.....|+.+.|..||+
T Consensus 233 ~plLvl~Sg~DEyvP~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~--~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 233 KPLLVLYSGKDEYVPPWVDKEALLERWKAATNPKIWSPLSGIIPGASHN--VSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp S-EEEEEE--TT-------------------------------------------------------------
T ss_pred CceEEEecCCCceeccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccCC
Confidence 9999999999999987632222222221 1224589999995 4444432346789999999874
No 85
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.54 E-value=5.8e-14 Score=129.81 Aligned_cols=112 Identities=18% Similarity=0.223 Sum_probs=86.4
Q ss_pred CCCCCcEEEEeCCCCCCC-ccHHHHHHHHHHHh--CCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhh--C
Q 015401 109 LPPDSPVLILMPGLTGGS-EDSYVRHMLLRARS--KGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSK--Y 183 (407)
Q Consensus 109 ~~~~~p~vv~lHG~~g~~-~~~~~~~~~~~l~~--~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~--~ 183 (407)
....+|++|++||+.++. .+.|...++..+.. .+|+||++|++|+|.+..+....+.....+++.++++.|... +
T Consensus 37 Fn~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl 116 (442)
T TIGR03230 37 FNHETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNY 116 (442)
T ss_pred cCCCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCC
Confidence 344789999999998654 34566667666653 369999999999998864432333345567888899888643 3
Q ss_pred CCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCC
Q 015401 184 PKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNP 222 (407)
Q Consensus 184 ~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p 222 (407)
+..+++++||||||.+|..++...|.+ |.+++.+++.
T Consensus 117 ~l~~VhLIGHSLGAhIAg~ag~~~p~r--V~rItgLDPA 153 (442)
T TIGR03230 117 PWDNVHLLGYSLGAHVAGIAGSLTKHK--VNRITGLDPA 153 (442)
T ss_pred CCCcEEEEEECHHHHHHHHHHHhCCcc--eeEEEEEcCC
Confidence 456999999999999999999988988 9999999874
No 86
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.54 E-value=9.1e-14 Score=127.13 Aligned_cols=251 Identities=14% Similarity=0.180 Sum_probs=145.1
Q ss_pred CcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEEE
Q 015401 113 SPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVG 192 (407)
Q Consensus 113 ~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG 192 (407)
.|+||++..+.+... ...+.+++.++. |+.|++.|+..-+..+.....+.++++++-+.+++++++. +++++|
T Consensus 102 ~~pvLiV~Pl~g~~~-~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~G~-----~v~l~G 174 (406)
T TIGR01849 102 GPAVLIVAPMSGHYA-TLLRSTVEALLP-DHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFLGP-----DIHVIA 174 (406)
T ss_pred CCcEEEEcCCchHHH-HHHHHHHHHHhC-CCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHhCC-----CCcEEE
Confidence 378999999876544 445788888998 9999999998877665445667778888777777766632 499999
Q ss_pred echhHHHHHHHHhcc-----CCCCCceeEEEEcCCCCHHHHHHHHhc-----chhH-------------------HHHHH
Q 015401 193 WSLGANILIRYLGHE-----SHSCPLSGAVSLCNPFNLVIADQDFRK-----GFNI-------------------VYDKA 243 (407)
Q Consensus 193 ~S~Gg~ia~~~a~~~-----p~~~~v~~~v~l~~p~~~~~~~~~~~~-----~~~~-------------------~~~~~ 243 (407)
+|+||..++.+++.. |.+ ++.++++++|.|.......... .+.. .+...
T Consensus 175 vCqgG~~~laa~Al~a~~~~p~~--~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~ 252 (406)
T TIGR01849 175 VCQPAVPVLAAVALMAENEPPAQ--PRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGF 252 (406)
T ss_pred EchhhHHHHHHHHHHHhcCCCCC--cceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHH
Confidence 999999988777665 444 9999999999986542111110 0000 01111
Q ss_pred HH-HHH-----HHHHHHHHhhhhhcCCCCCHHHHhcCCCHHHH-hhccccccCCC-CCHHHHHhhCC----------cch
Q 015401 244 LA-SAL-----CRIFKKHALLFEDMGGEFNIPLAANAKSVRQF-DDGLTRVSFGF-KSVDDYYSNSS----------SSD 305 (407)
Q Consensus 244 ~~-~~l-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~----------~~~ 305 (407)
+. ..+ .+....+..++..+... +.+.......+.++ .+...-+..-+ ......|.... -.-
T Consensus 253 ~~~~~F~~mnp~r~~~~~~~~~~~l~~g-d~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~~V 331 (406)
T TIGR01849 253 LQLAGFISMNLDRHTKAHSDFFLHLVKG-DGQEADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQFLLPQGKFIVEGKRV 331 (406)
T ss_pred HHHHHHHHcCcchHHHHHHHHHHHHhcC-CcchHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHhCCccCCcEEECCEEe
Confidence 00 000 00011111112111100 00001011101111 11000000000 11112232222 123
Q ss_pred hcCCCc-cceeeeecCCCCCCCCCCCChhHHhc---CC--CeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHH
Q 015401 306 SIKHVR-IPLLCIQAQNDPIAPSRGIPCEDIKA---NP--NCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEH 377 (407)
Q Consensus 306 ~l~~i~-~Pvlii~g~~D~~~~~~~~~~~~~~~---~~--~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~ 377 (407)
.+++|+ +|+|.+.|+.|.|+++... +.+... .+ +.+..+.+++||++.+.+... ....| ..|.+||.+
T Consensus 332 dl~~I~~~pll~V~ge~D~I~p~~qt-~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~-~~~i~--P~i~~wl~~ 405 (406)
T TIGR01849 332 DPGAITRVALLTVEGENDDISGLGQT-KAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRF-REEIY--PLVREFIRR 405 (406)
T ss_pred cHHHCcccceEEEeccCCCcCCHHHh-HHHHHHhhcCChhhceEeecCCCCeEEEeeChhh-hhhhc--hHHHHHHHh
Confidence 478899 9999999999999999876 344443 23 556777778999999988765 22334 889999875
No 87
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.54 E-value=7.4e-14 Score=120.30 Aligned_cols=168 Identities=16% Similarity=0.238 Sum_probs=110.2
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCC-CCCCCCC--cc--------cCCChhHHHHHHHHH
Q 015401 111 PDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGD-SPVTTPQ--FY--------SASFLGDMQEVVAHV 179 (407)
Q Consensus 111 ~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~-S~~~~~~--~~--------~~~~~~Dl~~~l~~l 179 (407)
++.|.||++|++.|-. .+.+.++..+.++||.|+++|+-+-.. ....... .. .+...+|+.++++++
T Consensus 12 ~~~~~Vvv~~d~~G~~--~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l 89 (218)
T PF01738_consen 12 GPRPAVVVIHDIFGLN--PNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYL 89 (218)
T ss_dssp SSEEEEEEE-BTTBS---HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCc--hHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 3679999999998744 567889999999999999999865443 1111110 00 123457888889999
Q ss_pred HhhC--CCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHh
Q 015401 180 GSKY--PKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNIVYDKALASALCRIFKKHAL 257 (407)
Q Consensus 180 ~~~~--~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 257 (407)
+.+. ...+|.++|+|+||.+++.++.+. .. +++++...++....
T Consensus 90 ~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~--~~a~v~~yg~~~~~------------------------------- 135 (218)
T PF01738_consen 90 RAQPEVDPGKIGVVGFCWGGKLALLLAARD-PR--VDAAVSFYGGSPPP------------------------------- 135 (218)
T ss_dssp HCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TT--SSEEEEES-SSSGG-------------------------------
T ss_pred HhccccCCCcEEEEEEecchHHhhhhhhhc-cc--cceEEEEcCCCCCC-------------------------------
Confidence 8874 346999999999999999999887 44 89999876511000
Q ss_pred hhhhcCCCCCHHHHhcCCCHHHHhhccccccCCCCCHHHHHhhCCcchhcCCCccceeeeecCCCCCCCCCCCC---hhH
Q 015401 258 LFEDMGGEFNIPLAANAKSVRQFDDGLTRVSFGFKSVDDYYSNSSSSDSIKHVRIPLLCIQAQNDPIAPSRGIP---CED 334 (407)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~---~~~ 334 (407)
.......++++|+++++|++|+.++.+... +.+
T Consensus 136 --------------------------------------------~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l 171 (218)
T PF01738_consen 136 --------------------------------------------PPLEDAPKIKAPVLILFGENDPFFPPEEVEALEEAL 171 (218)
T ss_dssp --------------------------------------------GHHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHH
T ss_pred --------------------------------------------cchhhhcccCCCEeecCccCCCCCChHHHHHHHHHH
Confidence 001234567899999999999999987532 234
Q ss_pred HhcCCCeEEEEcCCCCceeecCCC
Q 015401 335 IKANPNCLLILTPKGGHLGWVAGP 358 (407)
Q Consensus 335 ~~~~~~~~~~~~~~~gH~~~~~~p 358 (407)
.+.....++.++++++|-......
T Consensus 172 ~~~~~~~~~~~y~ga~HgF~~~~~ 195 (218)
T PF01738_consen 172 KAAGVDVEVHVYPGAGHGFANPSR 195 (218)
T ss_dssp HCTTTTEEEEEETT--TTTTSTTS
T ss_pred HhcCCcEEEEECCCCcccccCCCC
Confidence 455788999999999997554443
No 88
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.53 E-value=2.2e-13 Score=122.52 Aligned_cols=239 Identities=16% Similarity=0.162 Sum_probs=127.3
Q ss_pred cEEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCC-CC----
Q 015401 85 KRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSP-VT---- 159 (407)
Q Consensus 85 ~r~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~-~~---- 159 (407)
-...+...+|..+...+..|.. ..+..|.||.+||.++... .+... + .+...||.|+.+|.||+|... ..
T Consensus 57 y~v~f~s~~g~~V~g~l~~P~~--~~~~~Pavv~~hGyg~~~~-~~~~~-~-~~a~~G~~vl~~d~rGqg~~~~d~~~~~ 131 (320)
T PF05448_consen 57 YDVSFESFDGSRVYGWLYRPKN--AKGKLPAVVQFHGYGGRSG-DPFDL-L-PWAAAGYAVLAMDVRGQGGRSPDYRGSS 131 (320)
T ss_dssp EEEEEEEGGGEEEEEEEEEES---SSSSEEEEEEE--TT--GG-GHHHH-H-HHHHTT-EEEEE--TTTSSSS-B-SSBS
T ss_pred EEEEEEccCCCEEEEEEEecCC--CCCCcCEEEEecCCCCCCC-Ccccc-c-ccccCCeEEEEecCCCCCCCCCCccccC
Confidence 3445555667777666655552 2346799999999977654 33222 2 467899999999999999322 10
Q ss_pred ---CCC------------cccCCChhHHHHHHHHHHhhC--CCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCC
Q 015401 160 ---TPQ------------FYSASFLGDMQEVVAHVGSKY--PKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNP 222 (407)
Q Consensus 160 ---~~~------------~~~~~~~~Dl~~~l~~l~~~~--~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p 222 (407)
... ++...+..|...+++.+.... ..++|.+.|.|.||.+++.+|+..+. |++++...+.
T Consensus 132 ~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~r---v~~~~~~vP~ 208 (320)
T PF05448_consen 132 GGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDPR---VKAAAADVPF 208 (320)
T ss_dssp SS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSST----SEEEEESES
T ss_pred CCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCcc---ccEEEecCCC
Confidence 001 111123468888888888652 24699999999999999999999876 8888888764
Q ss_pred C-CHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHhcCCCHHHHhhccccccCCCCCHHHHHhhC
Q 015401 223 F-NLVIADQDFRKGFNIVYDKALASALCRIFKKHALLFEDMGGEFNIPLAANAKSVRQFDDGLTRVSFGFKSVDDYYSNS 301 (407)
Q Consensus 223 ~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (407)
+ +...... .... ...+ ..+..++.... . . .....+ ..+-....
T Consensus 209 l~d~~~~~~-~~~~-~~~y-----~~~~~~~~~~d----~---~--------~~~~~~--------------v~~~L~Y~ 252 (320)
T PF05448_consen 209 LCDFRRALE-LRAD-EGPY-----PEIRRYFRWRD----P---H--------HEREPE--------------VFETLSYF 252 (320)
T ss_dssp SSSHHHHHH-HT---STTT-----HHHHHHHHHHS----C---T--------HCHHHH--------------HHHHHHTT
T ss_pred ccchhhhhh-cCCc-cccH-----HHHHHHHhccC----C---C--------cccHHH--------------HHHHHhhh
Confidence 3 2211100 0000 0000 00001111000 0 0 000000 00111223
Q ss_pred CcchhcCCCccceeeeecCCCCCCCCCCCChhHHhcCCCeEEEEcCCCCceeecCCCCCCCCCCCc-HHHHHHHHHH
Q 015401 302 SSSDSIKHVRIPLLCIQAQNDPIAPSRGIPCEDIKANPNCLLILTPKGGHLGWVAGPEAPFGSPWT-DPVVMDFLEH 377 (407)
Q Consensus 302 ~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~w~-~~~i~~fl~~ 377 (407)
|..+..+.|++|+++-.|-.|+++|+...-.........+++.++|..||-. ... + .+...+||.+
T Consensus 253 D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~----~~~------~~~~~~~~~l~~ 319 (320)
T PF05448_consen 253 DAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGHEY----GPE------FQEDKQLNFLKE 319 (320)
T ss_dssp -HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--SST----THH------HHHHHHHHHHHH
T ss_pred hHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCCCc----hhh------HHHHHHHHHHhc
Confidence 4446677889999999999999999986522222333468999999999942 222 3 5667788865
No 89
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.52 E-value=5.5e-13 Score=115.03 Aligned_cols=185 Identities=18% Similarity=0.249 Sum_probs=130.3
Q ss_pred EEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCC-CCCCCCC--C--
Q 015401 87 ECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGC-GDSPVTT--P-- 161 (407)
Q Consensus 87 ~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~-G~S~~~~--~-- 161 (407)
..+..+| +.+...+..+.. ..+.|.||++|++.|-. .+++..+..+...||.|+++|+-+. |.+.... +
T Consensus 5 v~~~~~~-~~~~~~~a~P~~---~~~~P~VIv~hei~Gl~--~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~ 78 (236)
T COG0412 5 VTIPAPD-GELPAYLARPAG---AGGFPGVIVLHEIFGLN--PHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAE 78 (236)
T ss_pred eEeeCCC-ceEeEEEecCCc---CCCCCEEEEEecccCCc--hHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHH
Confidence 4556666 566656655553 22339999999997744 4679999999999999999999873 3332111 1
Q ss_pred -------CcccCCChhHHHHHHHHHHhhC--CCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHH
Q 015401 162 -------QFYSASFLGDMQEVVAHVGSKY--PKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDF 232 (407)
Q Consensus 162 -------~~~~~~~~~Dl~~~l~~l~~~~--~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~ 232 (407)
.........|+.+.+++|..+. ...+|.++|+||||.+++.++.+.|+ +++.+..-+....
T Consensus 79 ~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~~---v~a~v~fyg~~~~------- 148 (236)
T COG0412 79 LETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAPE---VKAAVAFYGGLIA------- 148 (236)
T ss_pred HhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccCC---ccEEEEecCCCCC-------
Confidence 0111455789999999998763 24589999999999999999999884 8999986543200
Q ss_pred hcchhHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHhcCCCHHHHhhccccccCCCCCHHHHHhhCCcchhcCCCcc
Q 015401 233 RKGFNIVYDKALASALCRIFKKHALLFEDMGGEFNIPLAANAKSVRQFDDGLTRVSFGFKSVDDYYSNSSSSDSIKHVRI 312 (407)
Q Consensus 233 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 312 (407)
+......++++
T Consensus 149 ---------------------------------------------------------------------~~~~~~~~~~~ 159 (236)
T COG0412 149 ---------------------------------------------------------------------DDTADAPKIKV 159 (236)
T ss_pred ---------------------------------------------------------------------CcccccccccC
Confidence 00012457899
Q ss_pred ceeeeecCCCCCCCCCCCCh---hHHhcCCCeEEEEcCCCCceeecC
Q 015401 313 PLLCIQAQNDPIAPSRGIPC---EDIKANPNCLLILTPKGGHLGWVA 356 (407)
Q Consensus 313 Pvlii~g~~D~~~~~~~~~~---~~~~~~~~~~~~~~~~~gH~~~~~ 356 (407)
|+|++.|+.|+.+|...... .+......+++.+++++.|-.+-.
T Consensus 160 pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~ 206 (236)
T COG0412 160 PVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFAND 206 (236)
T ss_pred cEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccC
Confidence 99999999999999875421 222223478899999988976644
No 90
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.52 E-value=4.8e-14 Score=124.94 Aligned_cols=111 Identities=14% Similarity=0.160 Sum_probs=84.0
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHHh-CCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhh--CCCCc
Q 015401 111 PDSPVLILMPGLTGGSEDSYVRHMLLRARS-KGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSK--YPKAH 187 (407)
Q Consensus 111 ~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~-~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~--~~~~~ 187 (407)
+.+|++|++||+.++..+.|...+...++. .+|+|+++|++|++.+.............+++..+++.+... .+..+
T Consensus 34 ~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~~ 113 (275)
T cd00707 34 PSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTGLSLEN 113 (275)
T ss_pred CCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcCCChHH
Confidence 468999999999887745666666665554 589999999999843321111122344567888888888765 34458
Q ss_pred EEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCC
Q 015401 188 LYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (407)
Q Consensus 188 v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~ 223 (407)
+++|||||||.++..++.+.+++ |.+++.+++..
T Consensus 114 i~lIGhSlGa~vAg~~a~~~~~~--v~~iv~LDPa~ 147 (275)
T cd00707 114 VHLIGHSLGAHVAGFAGKRLNGK--LGRITGLDPAG 147 (275)
T ss_pred EEEEEecHHHHHHHHHHHHhcCc--cceeEEecCCc
Confidence 99999999999999999999988 99999998754
No 91
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.48 E-value=1.9e-14 Score=119.65 Aligned_cols=229 Identities=14% Similarity=0.100 Sum_probs=120.2
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEE
Q 015401 111 PDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYA 190 (407)
Q Consensus 111 ~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~l 190 (407)
..++.++++|=.+|++ .+++.+...+ ...+.++++.+||.|.--....-.+++.+++.+...+.. .+.++++.+
T Consensus 5 ~~~~~L~cfP~AGGsa--~~fr~W~~~l-p~~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~---~~~d~P~al 78 (244)
T COG3208 5 GARLRLFCFPHAGGSA--SLFRSWSRRL-PADIELLAVQLPGRGDRFGEPLLTDIESLADELANELLP---PLLDAPFAL 78 (244)
T ss_pred CCCceEEEecCCCCCH--HHHHHHHhhC-CchhheeeecCCCcccccCCcccccHHHHHHHHHHHhcc---ccCCCCeee
Confidence 3667788888776655 3345655544 346999999999998653322222222233332222221 234569999
Q ss_pred EEechhHHHHHHHHhccCCC-CCceeEEEEcCCCCHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCHH
Q 015401 191 VGWSLGANILIRYLGHESHS-CPLSGAVSLCNPFNLVIADQDFRKGFNIVYDKALASALCRIFKKHALLFEDMGGEFNIP 269 (407)
Q Consensus 191 vG~S~Gg~ia~~~a~~~p~~-~~v~~~v~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 269 (407)
+||||||++|..+|.+.... ....++.+.+....... ....+...-+..+...+..+-......++
T Consensus 79 fGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~----~~~~i~~~~D~~~l~~l~~lgG~p~e~le--------- 145 (244)
T COG3208 79 FGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYD----RGKQIHHLDDADFLADLVDLGGTPPELLE--------- 145 (244)
T ss_pred cccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCc----ccCCccCCCHHHHHHHHHHhCCCChHHhc---------
Confidence 99999999999999876543 22555555544322000 00111111222222222221111111111
Q ss_pred HHhcCCCHHHHhhccccccCCCCCHHHHHhhCCcchhcCCCccceeeeecCCCCCCCCCCCChhHHhcCCCeEEEEcCCC
Q 015401 270 LAANAKSVRQFDDGLTRVSFGFKSVDDYYSNSSSSDSIKHVRIPLLCIQAQNDPIAPSRGIPCEDIKANPNCLLILTPKG 349 (407)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (407)
+ ..+.++.--+.+.. |...+.| + . ..-..++||+.++.|++|..+..+.+..+........++.+++ |
T Consensus 146 ---d-~El~~l~LPilRAD--~~~~e~Y-~---~-~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fd-G 213 (244)
T COG3208 146 ---D-PELMALFLPILRAD--FRALESY-R---Y-PPPAPLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFD-G 213 (244)
T ss_pred ---C-HHHHHHHHHHHHHH--HHHhccc-c---c-CCCCCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEec-C
Confidence 0 01111100000000 0000001 0 0 1125678999999999999998876633444455688999997 8
Q ss_pred CceeecCCCCCCCCCCCcHHHHHHHHH
Q 015401 350 GHLGWVAGPEAPFGSPWTDPVVMDFLE 376 (407)
Q Consensus 350 gH~~~~~~p~~~~~~~w~~~~i~~fl~ 376 (407)
||+...++.++ +.+.|.+.+.
T Consensus 214 gHFfl~~~~~~------v~~~i~~~l~ 234 (244)
T COG3208 214 GHFFLNQQREE------VLARLEQHLA 234 (244)
T ss_pred cceehhhhHHH------HHHHHHHHhh
Confidence 99876666544 5555555543
No 92
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.48 E-value=5.9e-14 Score=125.02 Aligned_cols=129 Identities=18% Similarity=0.117 Sum_probs=89.7
Q ss_pred CCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHHHHHH--H------HHHHhCCcEEEEEeCCCCCCCCCCCCCcc
Q 015401 93 DDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHM--L------LRARSKGWRVVVFNSRGCGDSPVTTPQFY 164 (407)
Q Consensus 93 dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~~--~------~~l~~~g~~vi~~D~rG~G~S~~~~~~~~ 164 (407)
||..|+.+.+.| ........|+||..|+++.+......... . ..+.++||.|++.|.||.|.|++.....
T Consensus 1 DGv~L~adv~~P-~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~- 78 (272)
T PF02129_consen 1 DGVRLAADVYRP-GADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM- 78 (272)
T ss_dssp TS-EEEEEEEEE---TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT-
T ss_pred CCCEEEEEEEec-CCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC-
Confidence 788888886655 11234577999999998754311111110 1 1288999999999999999998654332
Q ss_pred cCCChhHHHHHHHHHHhhCC--CCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHH
Q 015401 165 SASFLGDMQEVVAHVGSKYP--KAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLV 226 (407)
Q Consensus 165 ~~~~~~Dl~~~l~~l~~~~~--~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~ 226 (407)
...-.+|..++|+++..+ | +.+|.++|.|++|..++.+|+..|.. +++++..++..++.
T Consensus 79 ~~~e~~D~~d~I~W~~~Q-pws~G~VGm~G~SY~G~~q~~~A~~~~p~--LkAi~p~~~~~d~~ 139 (272)
T PF02129_consen 79 SPNEAQDGYDTIEWIAAQ-PWSNGKVGMYGISYGGFTQWAAAARRPPH--LKAIVPQSGWSDLY 139 (272)
T ss_dssp SHHHHHHHHHHHHHHHHC-TTEEEEEEEEEETHHHHHHHHHHTTT-TT--EEEEEEESE-SBTC
T ss_pred ChhHHHHHHHHHHHHHhC-CCCCCeEEeeccCHHHHHHHHHHhcCCCC--ceEEEecccCCccc
Confidence 445688999999999887 4 45999999999999999999988877 99999988776543
No 93
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.47 E-value=8.3e-13 Score=113.45 Aligned_cols=181 Identities=18% Similarity=0.222 Sum_probs=99.1
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHH-HHHhCCcEEEEEeCCC------CCC---CCCCCCCcccCC--C-------hhH
Q 015401 111 PDSPVLILMPGLTGGSEDSYVRHMLL-RARSKGWRVVVFNSRG------CGD---SPVTTPQFYSAS--F-------LGD 171 (407)
Q Consensus 111 ~~~p~vv~lHG~~g~~~~~~~~~~~~-~l~~~g~~vi~~D~rG------~G~---S~~~~~~~~~~~--~-------~~D 171 (407)
+..++||++||++++. +.+ ..... ........++.++-+- .|. +--......... . ++-
T Consensus 12 ~~~~lvi~LHG~G~~~-~~~-~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~ 89 (216)
T PF02230_consen 12 KAKPLVILLHGYGDSE-DLF-ALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAER 89 (216)
T ss_dssp T-SEEEEEE--TTS-H-HHH-HHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHH
T ss_pred CCceEEEEECCCCCCc-chh-HHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHH
Confidence 4789999999985543 233 33322 2234567777776542 222 110000001111 1 223
Q ss_pred HHHHHHHHHhh-CCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchhHHHHHHHHHHHHH
Q 015401 172 MQEVVAHVGSK-YPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNIVYDKALASALCR 250 (407)
Q Consensus 172 l~~~l~~l~~~-~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 250 (407)
+.++++..... .+..+++++|+|.||++++.++.++|+. +.++|.+++......
T Consensus 90 l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~--~~gvv~lsG~~~~~~----------------------- 144 (216)
T PF02230_consen 90 LDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEP--LAGVVALSGYLPPES----------------------- 144 (216)
T ss_dssp HHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSST--SSEEEEES---TTGC-----------------------
T ss_pred HHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcC--cCEEEEeeccccccc-----------------------
Confidence 34444443322 3456999999999999999999999998 999999986431000
Q ss_pred HHHHHHhhhhhcCCCCCHHHHhcCCCHHHHhhccccccCCCCCHHHHHhhCCcchhcCCCccceeeeecCCCCCCCCCCC
Q 015401 251 IFKKHALLFEDMGGEFNIPLAANAKSVRQFDDGLTRVSFGFKSVDDYYSNSSSSDSIKHVRIPLLCIQAQNDPIAPSRGI 330 (407)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~ 330 (407)
. . .. ...... ++|++++||.+|+++|.+..
T Consensus 145 ----------------~---------~---~~--------------------~~~~~~--~~pi~~~hG~~D~vvp~~~~ 174 (216)
T PF02230_consen 145 ----------------E---------L---ED--------------------RPEALA--KTPILIIHGDEDPVVPFEWA 174 (216)
T ss_dssp ----------------C---------C---HC--------------------CHCCCC--TS-EEEEEETT-SSSTHHHH
T ss_pred ----------------c---------c---cc--------------------cccccC--CCcEEEEecCCCCcccHHHH
Confidence 0 0 00 001111 68999999999999997643
Q ss_pred C---hhHHhcCCCeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHHH
Q 015401 331 P---CEDIKANPNCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEHL 378 (407)
Q Consensus 331 ~---~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~~ 378 (407)
. +.+.+...++++..++++||-... + ..+.+.+||++.
T Consensus 175 ~~~~~~L~~~~~~v~~~~~~g~gH~i~~----~------~~~~~~~~l~~~ 215 (216)
T PF02230_consen 175 EKTAEFLKAAGANVEFHEYPGGGHEISP----E------ELRDLREFLEKH 215 (216)
T ss_dssp HHHHHHHHCTT-GEEEEEETT-SSS--H----H------HHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEEcCCCCCCCCH----H------HHHHHHHHHhhh
Confidence 2 345556668999999999996432 2 457788888764
No 94
>PRK10162 acetyl esterase; Provisional
Probab=99.47 E-value=4.5e-12 Score=115.27 Aligned_cols=128 Identities=13% Similarity=0.101 Sum_probs=85.8
Q ss_pred cEEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCC--CCCccHHHHHHHHHHHh-CCcEEEEEeCCCCCCCCCCCC
Q 015401 85 KRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLT--GGSEDSYVRHMLLRARS-KGWRVVVFNSRGCGDSPVTTP 161 (407)
Q Consensus 85 ~r~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~--g~~~~~~~~~~~~~l~~-~g~~vi~~D~rG~G~S~~~~~ 161 (407)
+...+...+| .+.++++.+.. ...|+||++||.+ .++.+.+ ..+...+.+ .|+.|+++|+|.....
T Consensus 58 ~~~~i~~~~g-~i~~~~y~P~~----~~~p~vv~~HGGg~~~g~~~~~-~~~~~~la~~~g~~Vv~vdYrlape~----- 126 (318)
T PRK10162 58 RAYMVPTPYG-QVETRLYYPQP----DSQATLFYLHGGGFILGNLDTH-DRIMRLLASYSGCTVIGIDYTLSPEA----- 126 (318)
T ss_pred EEEEEecCCC-ceEEEEECCCC----CCCCEEEEEeCCcccCCCchhh-hHHHHHHHHHcCCEEEEecCCCCCCC-----
Confidence 3344555565 57777766642 2468999999943 1222233 445555655 5999999999965432
Q ss_pred CcccCCChhHHHHHHHHHHhh---C--CCCcEEEEEechhHHHHHHHHhccCCC----CCceeEEEEcCCCCH
Q 015401 162 QFYSASFLGDMQEVVAHVGSK---Y--PKAHLYAVGWSLGANILIRYLGHESHS----CPLSGAVSLCNPFNL 225 (407)
Q Consensus 162 ~~~~~~~~~Dl~~~l~~l~~~---~--~~~~v~lvG~S~Gg~ia~~~a~~~p~~----~~v~~~v~l~~p~~~ 225 (407)
......+|+.++++++... + ...+++++|+|+||++++.++....+. ..+.+++++++..+.
T Consensus 127 --~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 127 --RFPQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGL 197 (318)
T ss_pred --CCCCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCC
Confidence 2334578888888887642 2 235899999999999999988654211 128899998886653
No 95
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.45 E-value=1e-12 Score=109.89 Aligned_cols=237 Identities=18% Similarity=0.216 Sum_probs=143.7
Q ss_pred cEEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCC----
Q 015401 85 KRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTT---- 160 (407)
Q Consensus 85 ~r~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~---- 160 (407)
-.-+++..+|..|...+..|.. ..+..|.||-.||++|+..+ | ..+ -.+...||.|+++|.||.|.|+..+
T Consensus 57 ydvTf~g~~g~rI~gwlvlP~~--~~~~~P~vV~fhGY~g~~g~-~-~~~-l~wa~~Gyavf~MdvRGQg~~~~dt~~~p 131 (321)
T COG3458 57 YDVTFTGYGGARIKGWLVLPRH--EKGKLPAVVQFHGYGGRGGE-W-HDM-LHWAVAGYAVFVMDVRGQGSSSQDTADPP 131 (321)
T ss_pred EEEEEeccCCceEEEEEEeecc--cCCccceEEEEeeccCCCCC-c-ccc-ccccccceeEEEEecccCCCccccCCCCC
Confidence 3445666778888877666543 12467999999999887652 2 122 2456789999999999999883211
Q ss_pred -----------------CCcccCCChhHHHHHHHHHHhhCC--CCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcC
Q 015401 161 -----------------PQFYSASFLGDMQEVVAHVGSKYP--KAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCN 221 (407)
Q Consensus 161 -----------------~~~~~~~~~~Dl~~~l~~l~~~~~--~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~ 221 (407)
..++......|+..+++.+..-.+ ..+|.+.|.|.||.+++.+++..|. |++++.+-+
T Consensus 132 ~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~r---ik~~~~~~P 208 (321)
T COG3458 132 GGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDPR---IKAVVADYP 208 (321)
T ss_pred CCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcChh---hhccccccc
Confidence 123334556788888888775432 4599999999999999999999887 888887665
Q ss_pred CCCHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHhcCCCHHHHhhccccccCCCCCHHHHHhhC
Q 015401 222 PFNLVIADQDFRKGFNIVYDKALASALCRIFKKHALLFEDMGGEFNIPLAANAKSVRQFDDGLTRVSFGFKSVDDYYSNS 301 (407)
Q Consensus 222 p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (407)
-+.-. ...+.-.....+. .+..+++.+... ...-.+++ ...
T Consensus 209 fl~df--~r~i~~~~~~~yd-----ei~~y~k~h~~~-----------e~~v~~TL---------------------~yf 249 (321)
T COG3458 209 FLSDF--PRAIELATEGPYD-----EIQTYFKRHDPK-----------EAEVFETL---------------------SYF 249 (321)
T ss_pred ccccc--hhheeecccCcHH-----HHHHHHHhcCch-----------HHHHHHHH---------------------hhh
Confidence 33100 0000000000000 011111111100 00000111 112
Q ss_pred CcchhcCCCccceeeeecCCCCCCCCCCCChhHHhc-CCCeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHHH
Q 015401 302 SSSDSIKHVRIPLLCIQAQNDPIAPSRGIPCEDIKA-NPNCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEHL 378 (407)
Q Consensus 302 ~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~~ 378 (407)
+..+....|++|+|+..|-.|+++|+... ....+. -..+.+.+++.-+|... |.- ..+.+..|++.+
T Consensus 250 D~~n~A~RiK~pvL~svgL~D~vcpPstq-FA~yN~l~~~K~i~iy~~~aHe~~---p~~------~~~~~~~~l~~l 317 (321)
T COG3458 250 DIVNLAARIKVPVLMSVGLMDPVCPPSTQ-FAAYNALTTSKTIEIYPYFAHEGG---PGF------QSRQQVHFLKIL 317 (321)
T ss_pred hhhhHHHhhccceEEeecccCCCCCChhh-HHHhhcccCCceEEEeeccccccC---cch------hHHHHHHHHHhh
Confidence 23355678899999999999999999875 333333 34567778887778532 322 345577887664
No 96
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.44 E-value=3.9e-12 Score=116.19 Aligned_cols=291 Identities=19% Similarity=0.268 Sum_probs=170.5
Q ss_pred CCCCccEEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHHH-----HHHHHHHHhCCcEEEEEeCCCCC
Q 015401 80 PDVKLKRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYV-----RHMLLRARSKGWRVVVFNSRGCG 154 (407)
Q Consensus 80 ~~~~~~r~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~-----~~~~~~l~~~g~~vi~~D~rG~G 154 (407)
...+.+...+++.||-.+.+.-.+... ..+|+|++.||+.+++. .|+ ..++-.|.++||+|+.-|.||.-
T Consensus 44 ~gy~~E~h~V~T~DgYiL~lhRIp~~~----~~rp~Vll~HGLl~sS~-~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ 118 (403)
T KOG2624|consen 44 YGYPVEEHEVTTEDGYILTLHRIPRGK----KKRPVVLLQHGLLASSS-SWVLNGPEQSLAFLLADAGYDVWLGNNRGNT 118 (403)
T ss_pred cCCceEEEEEEccCCeEEEEeeecCCC----CCCCcEEEeeccccccc-cceecCccccHHHHHHHcCCceeeecCcCcc
Confidence 345678889999999977777554431 58999999999988775 443 34555678999999999999977
Q ss_pred CCCCC-------CC---CcccCC-ChhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCC-CCceeEEEEcCC
Q 015401 155 DSPVT-------TP---QFYSAS-FLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHS-CPLSGAVSLCNP 222 (407)
Q Consensus 155 ~S~~~-------~~---~~~~~~-~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~-~~v~~~v~l~~p 222 (407)
.|... .. ++++.+ -..|+-++|+++....+..+++.||||.|+.....++...|+. ..|+..++++|.
T Consensus 119 ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~ 198 (403)
T KOG2624|consen 119 YSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPA 198 (403)
T ss_pred cchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecch
Confidence 77421 11 122233 2569999999998887777999999999999999999998764 348999999886
Q ss_pred CCHHHHHH---HHhcc-------hhH------HH-----HHHHHHHHHH---HHHH----HHhhhhhcCC-CC-------
Q 015401 223 FNLVIADQ---DFRKG-------FNI------VY-----DKALASALCR---IFKK----HALLFEDMGG-EF------- 266 (407)
Q Consensus 223 ~~~~~~~~---~~~~~-------~~~------~~-----~~~~~~~l~~---~~~~----~~~~~~~~~~-~~------- 266 (407)
........ ..... +.. +. .+.+...+.. .... ......+... .+
T Consensus 199 ~~~k~~~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~~~n~~~~~~ 278 (403)
T KOG2624|consen 199 AFPKHIKSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSNNWNTTLLPV 278 (403)
T ss_pred hhhcccccHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchHhhhhcccch
Confidence 63220000 00000 000 00 0001110000 0000 0000000000 00
Q ss_pred ---CHHHHhcCCCHHHHhhcccc-----ccCCCC-CHHHHHhhCCcchhcCCCccceeeeecCCCCCCCCCCCChhHHhc
Q 015401 267 ---NIPLAANAKSVRQFDDGLTR-----VSFGFK-SVDDYYSNSSSSDSIKHVRIPLLCIQAQNDPIAPSRGIPCEDIKA 337 (407)
Q Consensus 267 ---~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~ 337 (407)
..+.....+.+..|.+.... -.+|.. ....|-....+...+.+|++|+.+.+|.+|.++.++.+ ......
T Consensus 279 ~~~h~pagtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~DV-~~~~~~ 357 (403)
T KOG2624|consen 279 YLAHLPAGTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPEDV-LILLLV 357 (403)
T ss_pred hhccCCCCccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHHHH-HHHHHh
Confidence 00011122233333332221 112222 22222233345567889999999999999999999887 344455
Q ss_pred CCCeEEEE---cCCCCceeecCCCCCCCCCCCcHHHHHHHHHHHH
Q 015401 338 NPNCLLIL---TPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEHLE 379 (407)
Q Consensus 338 ~~~~~~~~---~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~~~ 379 (407)
.+++.... +++-.|+-++-+-+. ..-+.+.|.+.++...
T Consensus 358 ~~~~~~~~~~~~~~ynHlDFi~g~da---~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 358 LPNSVIKYIVPIPEYNHLDFIWGLDA---KEEVYDPVIERLRLFE 399 (403)
T ss_pred cccccccccccCCCccceeeeeccCc---HHHHHHHHHHHHHhhh
Confidence 55544432 789999988776643 1115556666665443
No 97
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.44 E-value=7.3e-14 Score=113.93 Aligned_cols=158 Identities=18% Similarity=0.249 Sum_probs=93.4
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEEEech
Q 015401 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSL 195 (407)
Q Consensus 116 vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~ 195 (407)
|+++||++++..++|...+...+... ++|-..|+ . .+ ..+.|...+.+.+..+ +.++++||||+
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~------~--~P--~~~~W~~~l~~~i~~~-----~~~~ilVaHSL 64 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW------D--NP--DLDEWVQALDQAIDAI-----DEPTILVAHSL 64 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC--------T--S----HHHHHHHHHHCCHC------TTTEEEEEETH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc------C--CC--CHHHHHHHHHHHHhhc-----CCCeEEEEeCH
Confidence 68999999998888877777777555 77777766 1 11 1233333333333322 33799999999
Q ss_pred hHHHHHHHH-hccCCCCCceeEEEEcCCCCHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHhcC
Q 015401 196 GANILIRYL-GHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNIVYDKALASALCRIFKKHALLFEDMGGEFNIPLAANA 274 (407)
Q Consensus 196 Gg~ia~~~a-~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (407)
|+..+++++ .+...+ |.++++++++... . .....
T Consensus 65 Gc~~~l~~l~~~~~~~--v~g~lLVAp~~~~-~------------------------------------------~~~~~ 99 (171)
T PF06821_consen 65 GCLTALRWLAEQSQKK--VAGALLVAPFDPD-D------------------------------------------PEPFP 99 (171)
T ss_dssp HHHHHHHHHHHTCCSS--EEEEEEES--SCG-C------------------------------------------HHCCT
T ss_pred HHHHHHHHHhhccccc--ccEEEEEcCCCcc-c------------------------------------------ccchh
Confidence 999999999 555566 9999999876420 0 00000
Q ss_pred CCHHHHhhccccccCCCCCHHHHHhhCCcchhcCCCccceeeeecCCCCCCCCCCCChhHHhcCCCeEEEEcCCCCceee
Q 015401 275 KSVRQFDDGLTRVSFGFKSVDDYYSNSSSSDSIKHVRIPLLCIQAQNDPIAPSRGIPCEDIKANPNCLLILTPKGGHLGW 354 (407)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 354 (407)
..+. .|. ......+.+|.++|.+++|+++|.+.. +.+++.. +++++.++++||+.-
T Consensus 100 ~~~~-----------~f~-----------~~p~~~l~~~~~viaS~nDp~vp~~~a-~~~A~~l-~a~~~~~~~~GHf~~ 155 (171)
T PF06821_consen 100 PELD-----------GFT-----------PLPRDPLPFPSIVIASDNDPYVPFERA-QRLAQRL-GAELIILGGGGHFNA 155 (171)
T ss_dssp CGGC-----------CCT-----------TSHCCHHHCCEEEEEETTBSSS-HHHH-HHHHHHH-T-EEEEETS-TTSSG
T ss_pred hhcc-----------ccc-----------cCcccccCCCeEEEEcCCCCccCHHHH-HHHHHHc-CCCeEECCCCCCccc
Confidence 0000 000 001122356779999999999998765 4444444 788999999999755
Q ss_pred cCCC
Q 015401 355 VAGP 358 (407)
Q Consensus 355 ~~~p 358 (407)
-++-
T Consensus 156 ~~G~ 159 (171)
T PF06821_consen 156 ASGF 159 (171)
T ss_dssp GGTH
T ss_pred ccCC
Confidence 4443
No 98
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.39 E-value=1.1e-11 Score=95.13 Aligned_cols=168 Identities=14% Similarity=0.179 Sum_probs=121.2
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCC--CCCCCcccCCChhHHHHHHHHHHhhCCCCcEE
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSP--VTTPQFYSASFLGDMQEVVAHVGSKYPKAHLY 189 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~--~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~ 189 (407)
..-+||+.||.+++..+..+...+..+..+|+.|..|+++-...-. ...+..-....-..-...+.+++......+++
T Consensus 13 ~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~gpLi 92 (213)
T COG3571 13 APVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEGPLI 92 (213)
T ss_pred CCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCCcee
Confidence 3457889999988888888889999999999999999998654321 11111112333344556666677665566999
Q ss_pred EEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCHH
Q 015401 190 AVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNIVYDKALASALCRIFKKHALLFEDMGGEFNIP 269 (407)
Q Consensus 190 lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 269 (407)
+-|+||||-++.+++.+.... |+++++++-|+...- .+
T Consensus 93 ~GGkSmGGR~aSmvade~~A~--i~~L~clgYPfhppG----------------------------------KP------ 130 (213)
T COG3571 93 IGGKSMGGRVASMVADELQAP--IDGLVCLGYPFHPPG----------------------------------KP------ 130 (213)
T ss_pred eccccccchHHHHHHHhhcCC--cceEEEecCccCCCC----------------------------------Cc------
Confidence 999999999999999887766 999999987763100 00
Q ss_pred HHhcCCCHHHHhhccccccCCCCCHHHHHhhCCcchhcCCCccceeeeecCCCCCCCCCCCChhHHhcCCCeEEEEcCCC
Q 015401 270 LAANAKSVRQFDDGLTRVSFGFKSVDDYYSNSSSSDSIKHVRIPLLCIQAQNDPIAPSRGIPCEDIKANPNCLLILTPKG 349 (407)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (407)
+.+ -.+.+..+++|++|.+|+.|++-..+.+ .-....+..+++++.++
T Consensus 131 -----e~~-------------------------Rt~HL~gl~tPtli~qGtrD~fGtr~~V--a~y~ls~~iev~wl~~a 178 (213)
T COG3571 131 -----EQL-------------------------RTEHLTGLKTPTLITQGTRDEFGTRDEV--AGYALSDPIEVVWLEDA 178 (213)
T ss_pred -----ccc-------------------------hhhhccCCCCCeEEeecccccccCHHHH--HhhhcCCceEEEEeccC
Confidence 000 0146788899999999999998766544 23345778999999999
Q ss_pred Ccee
Q 015401 350 GHLG 353 (407)
Q Consensus 350 gH~~ 353 (407)
.|..
T Consensus 179 dHDL 182 (213)
T COG3571 179 DHDL 182 (213)
T ss_pred cccc
Confidence 9963
No 99
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.37 E-value=2.2e-11 Score=100.46 Aligned_cols=248 Identities=16% Similarity=0.228 Sum_probs=127.7
Q ss_pred EEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCC-CCCCCCCCCcc
Q 015401 86 RECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGC-GDSPVTTPQFY 164 (407)
Q Consensus 86 r~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~-G~S~~~~~~~~ 164 (407)
...+...+|..|.+.-..|.. ..+...++||+..|++-.. +.| ..++.++...||+|+.+|.-.| |.|++.-.+++
T Consensus 4 dhvi~~~~~~~I~vwet~P~~-~~~~~~~tiliA~Gf~rrm-dh~-agLA~YL~~NGFhViRyDsl~HvGlSsG~I~eft 80 (294)
T PF02273_consen 4 DHVIRLEDGRQIRVWETRPKN-NEPKRNNTILIAPGFARRM-DHF-AGLAEYLSANGFHVIRYDSLNHVGLSSGDINEFT 80 (294)
T ss_dssp EEEEEETTTEEEEEEEE---T-TS---S-EEEEE-TT-GGG-GGG-HHHHHHHHTTT--EEEE---B-------------
T ss_pred cceeEcCCCCEEEEeccCCCC-CCcccCCeEEEecchhHHH-HHH-HHHHHHHhhCCeEEEeccccccccCCCCChhhcc
Confidence 467888999999876555543 4566779999999996543 355 7889999999999999999876 88888777788
Q ss_pred cCCChhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchhHHHHHHH
Q 015401 165 SASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNIVYDKAL 244 (407)
Q Consensus 165 ~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~~~~~~~ 244 (407)
.....+|+..++++++. .+..++.++.-|+.|-+|...|++- + +.-+|...+..++...-..... .
T Consensus 81 ms~g~~sL~~V~dwl~~-~g~~~~GLIAaSLSaRIAy~Va~~i-~---lsfLitaVGVVnlr~TLe~al~---~------ 146 (294)
T PF02273_consen 81 MSIGKASLLTVIDWLAT-RGIRRIGLIAASLSARIAYEVAADI-N---LSFLITAVGVVNLRDTLEKALG---Y------ 146 (294)
T ss_dssp HHHHHHHHHHHHHHHHH-TT---EEEEEETTHHHHHHHHTTTS------SEEEEES--S-HHHHHHHHHS---S------
T ss_pred hHHhHHHHHHHHHHHHh-cCCCcchhhhhhhhHHHHHHHhhcc-C---cceEEEEeeeeeHHHHHHHHhc---c------
Confidence 87888999999999995 4666899999999999999999854 3 6666666665554322111000 0
Q ss_pred HHHHHHHHHHHHhhhhhcCCCCCHHHHhcCCCHHHHhhccccccCCCCCHHHHHhhCCcchhcCCCccceeeeecCCCCC
Q 015401 245 ASALCRIFKKHALLFEDMGGEFNIPLAANAKSVRQFDDGLTRVSFGFKSVDDYYSNSSSSDSIKHVRIPLLCIQAQNDPI 324 (407)
Q Consensus 245 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~ 324 (407)
.++. ....+.+...+.. .... ....|.... -..+|.+... ....++.+.+|++.+++++|.+
T Consensus 147 -----Dyl~---~~i~~lp~dldfe-Gh~l-~~~vFv~dc--~e~~w~~l~S------T~~~~k~l~iP~iaF~A~~D~W 208 (294)
T PF02273_consen 147 -----DYLQ---LPIEQLPEDLDFE-GHNL-GAEVFVTDC--FEHGWDDLDS------TINDMKRLSIPFIAFTANDDDW 208 (294)
T ss_dssp ------GGG---S-GGG--SEEEET-TEEE-EHHHHHHHH--HHTT-SSHHH------HHHHHTT--S-EEEEEETT-TT
T ss_pred -----chhh---cchhhCCCccccc-cccc-chHHHHHHH--HHcCCccchh------HHHHHhhCCCCEEEEEeCCCcc
Confidence 0000 0001111100000 0000 001111100 0123333332 2467888899999999999999
Q ss_pred CCCCCCChhHHh--cCCCeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHHHHH
Q 015401 325 APSRGIPCEDIK--ANPNCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEHLER 380 (407)
Q Consensus 325 ~~~~~~~~~~~~--~~~~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~~~~ 380 (407)
|....+ ..+.. ..+.+++..++|++|. .-|+ ...+..|.+.+.+
T Consensus 209 V~q~eV-~~~~~~~~s~~~klysl~Gs~Hd-L~en----------l~vlrnfy~svtk 254 (294)
T PF02273_consen 209 VKQSEV-EELLDNINSNKCKLYSLPGSSHD-LGEN----------LVVLRNFYQSVTK 254 (294)
T ss_dssp S-HHHH-HHHHTT-TT--EEEEEETT-SS--TTSS----------HHHHHHHHHHHHH
T ss_pred ccHHHH-HHHHHhcCCCceeEEEecCccch-hhhC----------hHHHHHHHHHHHH
Confidence 987766 34444 4567899999999995 2222 3567778777654
No 100
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.33 E-value=2.7e-11 Score=121.33 Aligned_cols=232 Identities=11% Similarity=0.055 Sum_probs=132.6
Q ss_pred HHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhh----------------CCCCcEEEEEechh
Q 015401 133 HMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSK----------------YPKAHLYAVGWSLG 196 (407)
Q Consensus 133 ~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~----------------~~~~~v~lvG~S~G 196 (407)
.+...++.+||.|++.|.||+|.|++.... ....-.+|..++|+++..+ +-+.+|.++|.|+|
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~-~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~ 348 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPTT-GDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYL 348 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCcc-CCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHH
Confidence 345678899999999999999999874322 2244578999999999843 12569999999999
Q ss_pred HHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchhH---HHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHhc
Q 015401 197 ANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNI---VYDKALASALCRIFKKHALLFEDMGGEFNIPLAAN 273 (407)
Q Consensus 197 g~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (407)
|.+++.+|...+.. ++++|..++..+..... ...+... -+...-...+............... ...+....
T Consensus 349 G~~~~~aAa~~pp~--LkAIVp~a~is~~yd~y--r~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~--~~~~~~~~ 422 (767)
T PRK05371 349 GTLPNAVATTGVEG--LETIIPEAAISSWYDYY--RENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYL--RHNEACEK 422 (767)
T ss_pred HHHHHHHHhhCCCc--ceEEEeeCCCCcHHHHh--hcCCceeccCCcCCcchhhHHHHhhhcccCcchhh--cchHHHHH
Confidence 99999999988887 99999987765432110 0111000 0000000000000000000000000 00000000
Q ss_pred CCCHHHHhhccccccCCCCCHHHHHhhCCcchhcCCCccceeeeecCCCCCCCCCCCCh---hHHhcCCCeEEEEcCCCC
Q 015401 274 AKSVRQFDDGLTRVSFGFKSVDDYYSNSSSSDSIKHVRIPLLCIQAQNDPIAPSRGIPC---EDIKANPNCLLILTPKGG 350 (407)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~---~~~~~~~~~~~~~~~~~g 350 (407)
.+.++..... .......+|+...+....+.+|++|+|+|+|..|..++++...+ .+.+.....++.+. .++
T Consensus 423 --~~~~~~~~~~---~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~-~g~ 496 (767)
T PRK05371 423 --LLAELTAAQD---RKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLH-QGG 496 (767)
T ss_pred --HHhhhhhhhh---hcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEe-CCC
Confidence 0000000000 00123346777778888899999999999999999998764322 22223445677655 478
Q ss_pred ceeecCC-CCCCCCCCCcHHHHHHHHHHHHHhcC
Q 015401 351 HLGWVAG-PEAPFGSPWTDPVVMDFLEHLERASS 383 (407)
Q Consensus 351 H~~~~~~-p~~~~~~~w~~~~i~~fl~~~~~~~~ 383 (407)
|...... ... +.+.+.+||.+......
T Consensus 497 H~~~~~~~~~d------~~e~~~~Wfd~~LkG~~ 524 (767)
T PRK05371 497 HVYPNNWQSID------FRDTMNAWFTHKLLGID 524 (767)
T ss_pred ccCCCchhHHH------HHHHHHHHHHhccccCC
Confidence 8643221 122 56778899988765543
No 101
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.29 E-value=1.2e-10 Score=95.98 Aligned_cols=89 Identities=9% Similarity=0.076 Sum_probs=57.3
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHHhCC--cEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEEEe
Q 015401 116 LILMPGLTGGSEDSYVRHMLLRARSKG--WRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGW 193 (407)
Q Consensus 116 vv~lHG~~g~~~~~~~~~~~~~l~~~g--~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~ 193 (407)
||++||+.++..+.-...+...+.+.+ ..+.++|++-. -+++.+.++.+........+.++|.
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~~---------------p~~a~~~l~~~i~~~~~~~~~liGS 66 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPPF---------------PEEAIAQLEQLIEELKPENVVLIGS 66 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCcC---------------HHHHHHHHHHHHHhCCCCCeEEEEE
Confidence 799999988776543334444454444 45666665421 2333344444444434446999999
Q ss_pred chhHHHHHHHHhccCCCCCceeEEEEcCCCC
Q 015401 194 SLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (407)
Q Consensus 194 S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~ 224 (407)
||||+.|..+|.+++ +++ |+++|.+.
T Consensus 67 SlGG~~A~~La~~~~----~~a-vLiNPav~ 92 (187)
T PF05728_consen 67 SLGGFYATYLAERYG----LPA-VLINPAVR 92 (187)
T ss_pred ChHHHHHHHHHHHhC----CCE-EEEcCCCC
Confidence 999999999998886 444 77887664
No 102
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.29 E-value=4.4e-11 Score=97.59 Aligned_cols=161 Identities=22% Similarity=0.276 Sum_probs=117.0
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCC-CCCCCCCCC--------CCcccCCChhHHHHHHHHHHhh
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSR-GCGDSPVTT--------PQFYSASFLGDMQEVVAHVGSK 182 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~r-G~G~S~~~~--------~~~~~~~~~~Dl~~~l~~l~~~ 182 (407)
++..||++--+.|... .-.+..+..+...||.|+++|+- |--.|+... .+.+......|+..++++|+.+
T Consensus 38 ~~~~li~i~DvfG~~~-~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~ 116 (242)
T KOG3043|consen 38 SKKVLIVIQDVFGFQF-PNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNH 116 (242)
T ss_pred CCeEEEEEEeeecccc-HHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHc
Confidence 4457777777767665 33577888888899999999984 422222100 1233345578999999999988
Q ss_pred CCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhhhc
Q 015401 183 YPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNIVYDKALASALCRIFKKHALLFEDM 262 (407)
Q Consensus 183 ~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 262 (407)
.+..+|.++|++|||-++..+....++ +.+++++-+.+.
T Consensus 117 g~~kkIGv~GfCwGak~vv~~~~~~~~---f~a~v~~hps~~-------------------------------------- 155 (242)
T KOG3043|consen 117 GDSKKIGVVGFCWGAKVVVTLSAKDPE---FDAGVSFHPSFV-------------------------------------- 155 (242)
T ss_pred CCcceeeEEEEeecceEEEEeeccchh---heeeeEecCCcC--------------------------------------
Confidence 878899999999999999999888884 888887654321
Q ss_pred CCCCCHHHHhcCCCHHHHhhccccccCCCCCHHHHHhhCCcchhcCCCccceeeeecCCCCCCCCCCCCh--hHHhcCCC
Q 015401 263 GGEFNIPLAANAKSVRQFDDGLTRVSFGFKSVDDYYSNSSSSDSIKHVRIPLLCIQAQNDPIAPSRGIPC--EDIKANPN 340 (407)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~--~~~~~~~~ 340 (407)
....+.++++|++++.|+.|.++|+..+.. +..+.++.
T Consensus 156 ----------------------------------------d~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~ 195 (242)
T KOG3043|consen 156 ----------------------------------------DSADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPA 195 (242)
T ss_pred ----------------------------------------ChhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcc
Confidence 013456778999999999999999886532 23333443
Q ss_pred --eEEEEcCCCCceee
Q 015401 341 --CLLILTPKGGHLGW 354 (407)
Q Consensus 341 --~~~~~~~~~gH~~~ 354 (407)
.++.++++-+|-..
T Consensus 196 ~~~~v~~f~g~~HGf~ 211 (242)
T KOG3043|consen 196 VGSQVKTFSGVGHGFV 211 (242)
T ss_pred cceeEEEcCCccchhh
Confidence 46999999999644
No 103
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.28 E-value=1.7e-11 Score=120.50 Aligned_cols=94 Identities=15% Similarity=0.206 Sum_probs=72.2
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCC---------CCC---c-----------ccCCC
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVT---------TPQ---F-----------YSASF 168 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~---------~~~---~-----------~~~~~ 168 (407)
+.|+||++||++++.. .| ..++..+.++||+|+++|+||||.|... ... + .+...
T Consensus 448 g~P~VVllHG~~g~~~-~~-~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~ 525 (792)
T TIGR03502 448 GWPVVIYQHGITGAKE-NA-LAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQS 525 (792)
T ss_pred CCcEEEEeCCCCCCHH-HH-HHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHH
Confidence 3579999999988654 44 6778888889999999999999999432 111 1 22344
Q ss_pred hhHHHHHHHHHH------hh------CCCCcEEEEEechhHHHHHHHHhcc
Q 015401 169 LGDMQEVVAHVG------SK------YPKAHLYAVGWSLGANILIRYLGHE 207 (407)
Q Consensus 169 ~~Dl~~~l~~l~------~~------~~~~~v~lvG~S~Gg~ia~~~a~~~ 207 (407)
+.|+..+...++ .. ++..+++++||||||.++..++...
T Consensus 526 v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 526 ILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred HHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 678888888887 22 5567999999999999999998753
No 104
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.28 E-value=2.4e-10 Score=101.08 Aligned_cols=237 Identities=14% Similarity=0.151 Sum_probs=129.8
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHH-HHHHHhCCcEEEEEeCCCCCCCCCCCCCccc-----------CCChhHHHHHHHH
Q 015401 111 PDSPVLILMPGLTGGSEDSYVRHM-LLRARSKGWRVVVFNSRGCGDSPVTTPQFYS-----------ASFLGDMQEVVAH 178 (407)
Q Consensus 111 ~~~p~vv~lHG~~g~~~~~~~~~~-~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~-----------~~~~~Dl~~~l~~ 178 (407)
+.+|++|.++|-+.... ..-..+ +..|++.|+..+.+..|-||.-.......+. ...+.+...++++
T Consensus 90 ~~rp~~IhLagTGDh~f-~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~W 168 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGF-WRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHW 168 (348)
T ss_pred CCCceEEEecCCCccch-hhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHH
Confidence 36899999999644322 111233 6778899999999999999865321111111 1235677888889
Q ss_pred HHhhCCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCH-HHHHHHHhcchhH--HHHHHHHHHHHHHHHHH
Q 015401 179 VGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNL-VIADQDFRKGFNI--VYDKALASALCRIFKKH 255 (407)
Q Consensus 179 l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~-~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~ 255 (407)
+..+ +..++.+.|.||||.+|...|+..|.. +..+-+++..... ......+....++ +... +... .+...
T Consensus 169 l~~~-G~~~~g~~G~SmGG~~A~laa~~~p~p--v~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~q-~~~~---~~~~~ 241 (348)
T PF09752_consen 169 LERE-GYGPLGLTGISMGGHMAALAASNWPRP--VALVPCLSWSSASVVFTEGVLSNSINWDALEKQ-FEDT---VYEEE 241 (348)
T ss_pred HHhc-CCCceEEEEechhHhhHHhhhhcCCCc--eeEEEeecccCCCcchhhhhhhcCCCHHHHHHH-hccc---chhhh
Confidence 9888 777999999999999999999999987 7666666553321 1111122221111 1111 0000 00000
Q ss_pred HhhhhhcCCCCCHHHHhcCCCHHHHhhccccccCCCCCHHHHHhhCCcchhcCCCc-----cceeeeecCCCCCCCCCCC
Q 015401 256 ALLFEDMGGEFNIPLAANAKSVRQFDDGLTRVSFGFKSVDDYYSNSSSSDSIKHVR-----IPLLCIQAQNDPIAPSRGI 330 (407)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-----~Pvlii~g~~D~~~~~~~~ 330 (407)
.....................-.+-.... ....+....+.+.. -.+.++.+++|..+|...+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~Ea~~~m-------------~~~md~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v 308 (348)
T PF09752_consen 242 ISDIPAQNKSLPLDSMEERRRDREALRFM-------------RGVMDSFTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGV 308 (348)
T ss_pred hcccccCcccccchhhccccchHHHHHHH-------------HHHHHhhccccccCCCCCCCcEEEEEecCceEechhhc
Confidence 00000000000000000000000000000 00001111222222 3478899999999998877
Q ss_pred ChhHHhcCCCeEEEEcCCCCceee-cCCCCCCCCCCCcHHHHHHHHH
Q 015401 331 PCEDIKANPNCLLILTPKGGHLGW-VAGPEAPFGSPWTDPVVMDFLE 376 (407)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~gH~~~-~~~p~~~~~~~w~~~~i~~fl~ 376 (407)
..+.+..|++++..++ |||+.- +-+.+. |.+.|.+-++
T Consensus 309 -~~Lq~~WPGsEvR~l~-gGHVsA~L~~q~~------fR~AI~Daf~ 347 (348)
T PF09752_consen 309 -LSLQEIWPGSEVRYLP-GGHVSAYLLHQEA------FRQAIYDAFE 347 (348)
T ss_pred -chHHHhCCCCeEEEec-CCcEEEeeechHH------HHHHHHHHhh
Confidence 4889999999999997 599954 444444 6666666543
No 105
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.26 E-value=1.5e-11 Score=109.94 Aligned_cols=252 Identities=14% Similarity=0.235 Sum_probs=143.7
Q ss_pred CCcEEEEeCCCCCCCccHHH------HHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCCh-hHHHHHHHHHHhhCC
Q 015401 112 DSPVLILMPGLTGGSEDSYV------RHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFL-GDMQEVVAHVGSKYP 184 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~------~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~-~Dl~~~l~~l~~~~~ 184 (407)
.+++++++|.+... .|+ ..++..++++|+.|+++++++=..+.. ....++++ +++...++.++...+
T Consensus 106 ~~~PlLiVpP~iNk---~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~---~~~~edYi~e~l~~aid~v~~itg 179 (445)
T COG3243 106 LKRPLLIVPPWINK---FYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLA---AKNLEDYILEGLSEAIDTVKDITG 179 (445)
T ss_pred CCCceEeeccccCc---eeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhh---hccHHHHHHHHHHHHHHHHHHHhC
Confidence 56789999986431 222 466778999999999999997666543 33455555 778888888887777
Q ss_pred CCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHH-----------hcch--hHHHHHHHHHHHHHH
Q 015401 185 KAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDF-----------RKGF--NIVYDKALASALCRI 251 (407)
Q Consensus 185 ~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~-----------~~~~--~~~~~~~~~~~l~~~ 251 (407)
.++|.++|||.||+++..+++.++.+ +|+.++.+.+++|+....... .... ..............+
T Consensus 180 ~~~InliGyCvGGtl~~~ala~~~~k-~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~lpg~~ma~~F~m 258 (445)
T COG3243 180 QKDINLIGYCVGGTLLAAALALMAAK-RIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILPGWYMAIVFFL 258 (445)
T ss_pred ccccceeeEecchHHHHHHHHhhhhc-ccccceeeecchhhccccccccccCHHHHHHHHhhhhhccCCChHHHHHHHHh
Confidence 67999999999999999999888876 599999999988765432210 0000 000000000000000
Q ss_pred HHHHHhhhhhcCCCCCHHHHhcCC-----CHHHHhhccccccCCCCCHH----HHHhh----------CCcchhcCCCcc
Q 015401 252 FKKHALLFEDMGGEFNIPLAANAK-----SVRQFDDGLTRVSFGFKSVD----DYYSN----------SSSSDSIKHVRI 312 (407)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~----~~~~~----------~~~~~~l~~i~~ 312 (407)
++.....+. +..+.....+ .+..|...-++. .-.... ++|.. ....-.+.+|+|
T Consensus 259 Lrpndliw~-----~fV~nyl~ge~pl~fdllyWn~dst~~--~~~~~~~~Lrn~y~~N~l~~g~~~v~G~~VdL~~It~ 331 (445)
T COG3243 259 LRPNDLIWN-----YFVNNYLDGEQPLPFDLLYWNADSTRL--PGAAHSEYLRNFYLENRLIRGGLEVSGTMVDLGDITC 331 (445)
T ss_pred cCccccchH-----HHHHHhcCCCCCCchhHHHhhCCCccC--chHHHHHHHHHHHHhChhhccceEECCEEechhhccc
Confidence 000000000 0000000000 001111000000 000001 11111 112245789999
Q ss_pred ceeeeecCCCCCCCCCCCChhHHhcCCC-eEEEEcCCCCceeecCCC-CCCCCCCCc--HHHHHHHHHHHH
Q 015401 313 PLLCIQAQNDPIAPSRGIPCEDIKANPN-CLLILTPKGGHLGWVAGP-EAPFGSPWT--DPVVMDFLEHLE 379 (407)
Q Consensus 313 Pvlii~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~p-~~~~~~~w~--~~~i~~fl~~~~ 379 (407)
|++++.|++|.|+|.+++ ....+..++ ++++.. ++||...+-+| ...+...|. .....+|+....
T Consensus 332 pvy~~a~~~DhI~P~~Sv-~~g~~l~~g~~~f~l~-~sGHIa~vVN~p~~~k~~~w~n~~~~~~~Wl~~a~ 400 (445)
T COG3243 332 PVYNLAAEEDHIAPWSSV-YLGARLLGGEVTFVLS-RSGHIAGVVNPPGNAKYQYWTNLPADAEAWLSGAK 400 (445)
T ss_pred ceEEEeecccccCCHHHH-HHHHHhcCCceEEEEe-cCceEEEEeCCcchhhhhcCCCCcchHHHHHHhhc
Confidence 999999999999999887 556666666 566655 59999876664 333334553 234566666543
No 106
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.26 E-value=1.8e-10 Score=107.13 Aligned_cols=294 Identities=16% Similarity=0.168 Sum_probs=165.0
Q ss_pred CCCCCCCCCCCCcc--cccccccchhhhccccCCCCcCCCC---CCChh--hHHHHHHhhhc--CCCCCCccE-E--EEE
Q 015401 23 TKAMPYNHPHPSLE--VTGGALHTFLPALKTLSRPYSPFPV---IGWNC--HVETIFAAFFR--SLPDVKLKR-E--CIR 90 (407)
Q Consensus 23 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~y~p~p~---~~~~~--~~qt~~~~~~~--~~~~~~~~r-~--~~~ 90 (407)
|+.+.+++.....- =++..+..++..|.+...|-.-.-+ |..|. +.|+-+.+.+. ..+.+.|.- + .++
T Consensus 540 ~g~~~rlt~~g~sh~~~l~~~~d~fv~~~~sv~sP~cv~~y~ls~~~~~~l~~q~~~~~~l~~~~~~~Pdy~p~eif~fq 619 (867)
T KOG2281|consen 540 PGEIARLTEPGYSHSCELDQQCDHFVSYYSSVGSPPCVSLYSLSWPENDPLPKQVSFWAILVSGAPPPPDYVPPEIFSFQ 619 (867)
T ss_pred CCceeeccCCCcccchhhhhhhhhHhhhhhcCCCCceEEEEeccCCccCcccchhhHHHHHHhcCCCCCccCChhheeee
Confidence 45555555533211 1334455566666555443111000 11221 23444444322 233344433 3 346
Q ss_pred cCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCC-------ccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCc
Q 015401 91 TKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGS-------EDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQF 163 (407)
Q Consensus 91 ~~dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~-------~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~ 163 (407)
...|..+..-.+.|.+-.....-|+|+++-|.++-. +-.|++ ...|++.||.|+++|.||...-.......
T Consensus 620 s~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR--~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ 697 (867)
T KOG2281|consen 620 SKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLR--FCRLASLGYVVVFIDNRGSAHRGLKFESH 697 (867)
T ss_pred cCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhh--hhhhhhcceEEEEEcCCCccccchhhHHH
Confidence 766655554445554322233569999999966422 111221 23577899999999999976543322110
Q ss_pred c---c-CCChhHHHHHHHHHHhhCC---CCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcch
Q 015401 164 Y---S-ASFLGDMQEVVAHVGSKYP---KAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGF 236 (407)
Q Consensus 164 ~---~-~~~~~Dl~~~l~~l~~~~~---~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~ 236 (407)
- + .--++|..+-++.|..+++ -.+|.+-|||+||++++..+.++|+- ++.+|.-+ |...
T Consensus 698 ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~I--frvAIAGa-pVT~----------- 763 (867)
T KOG2281|consen 698 IKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNI--FRVAIAGA-PVTD----------- 763 (867)
T ss_pred HhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcce--eeEEeccC-ccee-----------
Confidence 0 0 1125677777777776653 35899999999999999999999996 66665543 3310
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHhcCCCHHHHhhccccccCCCC-CHHHHHhhCCcc---hhcCCCcc
Q 015401 237 NIVYDKALASALCRIFKKHALLFEDMGGEFNIPLAANAKSVRQFDDGLTRVSFGFK-SVDDYYSNSSSS---DSIKHVRI 312 (407)
Q Consensus 237 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~l~~i~~ 312 (407)
+..+|..++...++++ ..+.-|...+.. +.+++=.-
T Consensus 764 ----------------------------------------W~~YDTgYTERYMg~P~~nE~gY~agSV~~~Veklpdepn 803 (867)
T KOG2281|consen 764 ----------------------------------------WRLYDTGYTERYMGYPDNNEHGYGAGSVAGHVEKLPDEPN 803 (867)
T ss_pred ----------------------------------------eeeecccchhhhcCCCccchhcccchhHHHHHhhCCCCCc
Confidence 1111222222223333 112222333322 33333345
Q ss_pred ceeeeecCCCCCCCCCCCC---hhHHhcCCCeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHH
Q 015401 313 PLLCIQAQNDPIAPSRGIP---CEDIKANPNCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEH 377 (407)
Q Consensus 313 Pvlii~g~~D~~~~~~~~~---~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~ 377 (407)
.+|++||--|.-|...... .++.++.+..++.++|+-.|. ...++. ...+...+..|+++
T Consensus 804 RLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHs--iR~~es---~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 804 RLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHS--IRNPES---GIYYEARLLHFLQE 866 (867)
T ss_pred eEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccc--cCCCcc---chhHHHHHHHHHhh
Confidence 6899999999988876543 255667888999999999995 444443 44578889999875
No 107
>COG0400 Predicted esterase [General function prediction only]
Probab=99.25 E-value=1.3e-10 Score=97.14 Aligned_cols=173 Identities=19% Similarity=0.218 Sum_probs=108.0
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCC--------CCCCCcccCCC---hhHHHHHHHHH
Q 015401 111 PDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSP--------VTTPQFYSASF---LGDMQEVVAHV 179 (407)
Q Consensus 111 ~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~--------~~~~~~~~~~~---~~Dl~~~l~~l 179 (407)
+..|+||++||++|+.. .++. . ......++.++.+ ||-=.-. .....+..++. +..+.++++.+
T Consensus 16 p~~~~iilLHG~Ggde~-~~~~-~-~~~~~P~~~~is~--rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~ 90 (207)
T COG0400 16 PAAPLLILLHGLGGDEL-DLVP-L-PELILPNATLVSP--RGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEEL 90 (207)
T ss_pred CCCcEEEEEecCCCChh-hhhh-h-hhhcCCCCeEEcC--CCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHH
Confidence 46789999999976554 3323 2 2333445555544 3321100 00111112222 33444555555
Q ss_pred HhhCC--CCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHh
Q 015401 180 GSKYP--KAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNIVYDKALASALCRIFKKHAL 257 (407)
Q Consensus 180 ~~~~~--~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 257 (407)
..+++ ..+++++|+|-||++++....++|.. ++++|++++......
T Consensus 91 ~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~--~~~ail~~g~~~~~~------------------------------ 138 (207)
T COG0400 91 AEEYGIDSSRIILIGFSQGANIALSLGLTLPGL--FAGAILFSGMLPLEP------------------------------ 138 (207)
T ss_pred HHHhCCChhheEEEecChHHHHHHHHHHhCchh--hccchhcCCcCCCCC------------------------------
Confidence 55554 36999999999999999999999998 999998876431100
Q ss_pred hhhhcCCCCCHHHHhcCCCHHHHhhccccccCCCCCHHHHHhhCCcchhcCCCccceeeeecCCCCCCCCCCCC---hhH
Q 015401 258 LFEDMGGEFNIPLAANAKSVRQFDDGLTRVSFGFKSVDDYYSNSSSSDSIKHVRIPLLCIQAQNDPIAPSRGIP---CED 334 (407)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~---~~~ 334 (407)
...-..-.+|+++++|+.|+++|..... +.+
T Consensus 139 ----------------------------------------------~~~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l 172 (207)
T COG0400 139 ----------------------------------------------ELLPDLAGTPILLSHGTEDPVVPLALAEALAEYL 172 (207)
T ss_pred ----------------------------------------------ccccccCCCeEEEeccCcCCccCHHHHHHHHHHH
Confidence 0000111579999999999999976432 355
Q ss_pred HhcCCCeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHH
Q 015401 335 IKANPNCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEH 377 (407)
Q Consensus 335 ~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~ 377 (407)
.+..-+++...++ +||-...+ ..+.+.+|+..
T Consensus 173 ~~~g~~v~~~~~~-~GH~i~~e----------~~~~~~~wl~~ 204 (207)
T COG0400 173 TASGADVEVRWHE-GGHEIPPE----------ELEAARSWLAN 204 (207)
T ss_pred HHcCCCEEEEEec-CCCcCCHH----------HHHHHHHHHHh
Confidence 5667888999998 99964332 34567778765
No 108
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.25 E-value=1.3e-09 Score=92.67 Aligned_cols=256 Identities=17% Similarity=0.199 Sum_probs=152.4
Q ss_pred ccEEEEEcCCCCEEEEEee-cCCCCCCCCCCcEEEEeCCCCCCCccHHHHHH-----HHHHHhCCcEEEEEeCCCCCCCC
Q 015401 84 LKRECIRTKDDGSVALDWI-SGDHQLLPPDSPVLILMPGLTGGSEDSYVRHM-----LLRARSKGWRVVVFNSRGCGDSP 157 (407)
Q Consensus 84 ~~r~~~~~~dg~~~~~~~~-~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~~-----~~~l~~~g~~vi~~D~rG~G~S~ 157 (407)
.+++.+.+..| .+.+... .++ +++|++|-.|.++-+..+.| ..+ +..+..+ |.++-+|.||+-.-.
T Consensus 22 ~~e~~V~T~~G-~v~V~V~Gd~~-----~~kpaiiTyhDlglN~~scF-q~ff~~p~m~ei~~~-fcv~HV~~PGqe~gA 93 (326)
T KOG2931|consen 22 CQEHDVETAHG-VVHVTVYGDPK-----GNKPAIITYHDLGLNHKSCF-QGFFNFPDMAEILEH-FCVYHVDAPGQEDGA 93 (326)
T ss_pred ceeeeeccccc-cEEEEEecCCC-----CCCceEEEecccccchHhHh-HHhhcCHhHHHHHhh-eEEEecCCCccccCC
Confidence 56777777776 4554433 222 26899999999877665433 322 2334444 999999999986442
Q ss_pred CCCC----CcccCCChhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHh
Q 015401 158 VTTP----QFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFR 233 (407)
Q Consensus 158 ~~~~----~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~ 233 (407)
...+ -.+.+++++++..+++++..+ .++.+|--.|++|..++|..+|++ |-|+|+++.......
T Consensus 94 p~~p~~y~yPsmd~LAd~l~~VL~~f~lk----~vIg~GvGAGAyIL~rFAl~hp~r--V~GLvLIn~~~~a~g------ 161 (326)
T KOG2931|consen 94 PSFPEGYPYPSMDDLADMLPEVLDHFGLK----SVIGMGVGAGAYILARFALNHPER--VLGLVLINCDPCAKG------ 161 (326)
T ss_pred ccCCCCCCCCCHHHHHHHHHHHHHhcCcc----eEEEecccccHHHHHHHHhcChhh--eeEEEEEecCCCCch------
Confidence 2222 234467788888888888887 899999999999999999999999 999999976432111
Q ss_pred cchhHHHHHHH---------HHHHHHHHHHHHhhhhhcCCCCCHHHHhcCCCHHHHhhccccccCCCCCHHHHHh----h
Q 015401 234 KGFNIVYDKAL---------ASALCRIFKKHALLFEDMGGEFNIPLAANAKSVRQFDDGLTRVSFGFKSVDDYYS----N 300 (407)
Q Consensus 234 ~~~~~~~~~~~---------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 300 (407)
+..+.+.+.. ......++-.+..-.+... .+.+.++++.+.+.... .-.+...|+. +
T Consensus 162 -wiew~~~K~~s~~l~~~Gmt~~~~d~ll~H~Fg~e~~~--------~~~diVq~Yr~~l~~~~-N~~Nl~~fl~ayn~R 231 (326)
T KOG2931|consen 162 -WIEWAYNKVSSNLLYYYGMTQGVKDYLLAHHFGKEELG--------NNSDIVQEYRQHLGERL-NPKNLALFLNAYNGR 231 (326)
T ss_pred -HHHHHHHHHHHHHHHhhchhhhHHHHHHHHHhcccccc--------ccHHHHHHHHHHHHhcC-ChhHHHHHHHHhcCC
Confidence 1112222222 2222222222111101000 01122222322222211 1122222222 2
Q ss_pred CCcchhcC----CCccceeeeecCCCCCCCCCCCChhHH-hcC-CCeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHH
Q 015401 301 SSSSDSIK----HVRIPLLCIQAQNDPIAPSRGIPCEDI-KAN-PNCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDF 374 (407)
Q Consensus 301 ~~~~~~l~----~i~~Pvlii~g~~D~~~~~~~~~~~~~-~~~-~~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~f 374 (407)
.+...... .++||+|++.|...+.+..- .... +.. .+..+..+.++|-++..++|.. +++.+.=|
T Consensus 232 ~DL~~~r~~~~~tlkc~vllvvGd~Sp~~~~v---v~~n~~Ldp~~ttllk~~d~g~l~~e~qP~k------l~ea~~~F 302 (326)
T KOG2931|consen 232 RDLSIERPKLGTTLKCPVLLVVGDNSPHVSAV---VECNSKLDPTYTTLLKMADCGGLVQEEQPGK------LAEAFKYF 302 (326)
T ss_pred CCccccCCCcCccccccEEEEecCCCchhhhh---hhhhcccCcccceEEEEcccCCcccccCchH------HHHHHHHH
Confidence 22222222 45699999999998866432 1222 222 3678888889999999999998 88888888
Q ss_pred HHHH
Q 015401 375 LEHL 378 (407)
Q Consensus 375 l~~~ 378 (407)
++..
T Consensus 303 lqG~ 306 (326)
T KOG2931|consen 303 LQGM 306 (326)
T ss_pred HccC
Confidence 8753
No 109
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=99.25 E-value=8.3e-11 Score=110.48 Aligned_cols=138 Identities=14% Similarity=0.051 Sum_probs=105.0
Q ss_pred CCccEEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeC--CCCCC---CccHHHHHHHH---HHHhCCcEEEEEeCCCC
Q 015401 82 VKLKRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMP--GLTGG---SEDSYVRHMLL---RARSKGWRVVVFNSRGC 153 (407)
Q Consensus 82 ~~~~r~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~lH--G~~g~---~~~~~~~~~~~---~l~~~g~~vi~~D~rG~ 153 (407)
.......+++.||..++.+.+.+.+ .+..|+++..+ ...-. ... ...... .+.++||.||..|.||+
T Consensus 17 ~~~~~v~V~MRDGvrL~~dIy~Pa~---~g~~Pvll~~~~~Py~k~~~~~~~--~~~~~p~~~~~aa~GYavV~qDvRG~ 91 (563)
T COG2936 17 YIERDVMVPMRDGVRLAADIYRPAG---AGPLPVLLSRTRLPYRKRNGTFGP--QLSALPQPAWFAAQGYAVVNQDVRGR 91 (563)
T ss_pred eeeeeeeEEecCCeEEEEEEEccCC---CCCCceeEEeeccccccccccCcc--hhhcccccceeecCceEEEEeccccc
Confidence 3445678999999999998665553 24778888888 22111 110 112222 46789999999999999
Q ss_pred CCCCCCCCCcccCCChhHHHHHHHHHHhh-CCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHH
Q 015401 154 GDSPVTTPQFYSASFLGDMQEVVAHVGSK-YPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVI 227 (407)
Q Consensus 154 G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~-~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~ 227 (407)
|.|++....+.. .-++|-.++|+++..+ +-+.+|.++|.|++|...+.+|+..|.. +++++..++.++...
T Consensus 92 ~~SeG~~~~~~~-~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPa--Lkai~p~~~~~D~y~ 163 (563)
T COG2936 92 GGSEGVFDPESS-REAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPA--LKAIAPTEGLVDRYR 163 (563)
T ss_pred ccCCcccceecc-ccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCch--heeeccccccccccc
Confidence 999987665555 5688999999999875 3477999999999999999999998887 999999888877533
No 110
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.24 E-value=1.5e-11 Score=106.04 Aligned_cols=257 Identities=18% Similarity=0.187 Sum_probs=134.0
Q ss_pred EEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHH---HHHHHHHHHhCCcEEEEEeCCCCCCCCCCCC--
Q 015401 87 ECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSY---VRHMLLRARSKGWRVVVFNSRGCGDSPVTTP-- 161 (407)
Q Consensus 87 ~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~---~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~-- 161 (407)
+.++++-| .+.+... ++. .+.+|++|-.|-++-+..+.| +.........+.|.++=+|.||+..-....+
T Consensus 2 h~v~t~~G-~v~V~v~-G~~---~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p~~ 76 (283)
T PF03096_consen 2 HDVETPYG-SVHVTVQ-GDP---KGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLPEG 76 (283)
T ss_dssp EEEEETTE-EEEEEEE-SS-----TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTTSEEEEEE-TTTSTT-----TT
T ss_pred ceeccCce-EEEEEEE-ecC---CCCCceEEEeccccccchHHHHHHhcchhHHHHhhceEEEEEeCCCCCCCccccccc
Confidence 45666666 5655433 332 126999999999865444212 1122223456789999999999975432222
Q ss_pred --CcccCCChhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchhHH
Q 015401 162 --QFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNIV 239 (407)
Q Consensus 162 --~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~~ 239 (407)
-.+.+++++++.+++++++.+ .++.+|--.||+|..++|..+|++ |.|+|++++......-. .+.
T Consensus 77 y~yPsmd~LAe~l~~Vl~~f~lk----~vIg~GvGAGAnIL~rfAl~~p~~--V~GLiLvn~~~~~~gw~-------Ew~ 143 (283)
T PF03096_consen 77 YQYPSMDQLAEMLPEVLDHFGLK----SVIGFGVGAGANILARFALKHPER--VLGLILVNPTCTAAGWM-------EWF 143 (283)
T ss_dssp -----HHHHHCTHHHHHHHHT-------EEEEEETHHHHHHHHHHHHSGGG--EEEEEEES---S---HH-------HHH
T ss_pred ccccCHHHHHHHHHHHHHhCCcc----EEEEEeeccchhhhhhccccCccc--eeEEEEEecCCCCccHH-------HHH
Confidence 134577788999999999998 899999999999999999999999 99999998754321111 111
Q ss_pred HHHHHH---------HHHHHHHHHHHhhhhhcCCCCCHHHHhcCCCHHHHhhccccccC---CCCCHHHHHhhCCcchhc
Q 015401 240 YDKALA---------SALCRIFKKHALLFEDMGGEFNIPLAANAKSVRQFDDGLTRVSF---GFKSVDDYYSNSSSSDSI 307 (407)
Q Consensus 240 ~~~~~~---------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l 307 (407)
+.+... ......+..+..-.... ..+...+..+...+..... -..-...|..+.+.....
T Consensus 144 ~~K~~~~~L~~~gmt~~~~d~Ll~h~Fg~~~~--------~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~ 215 (283)
T PF03096_consen 144 YQKLSSWLLYSYGMTSSVKDYLLWHYFGKEEE--------ENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIER 215 (283)
T ss_dssp HHHHH-------CTTS-HHHHHHHHHS-HHHH--------HCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SEC
T ss_pred HHHHhcccccccccccchHHhhhhcccccccc--------cccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhc
Confidence 111111 11111111110000000 0011112222222211100 001122344455555666
Q ss_pred CCCccceeeeecCCCCCCCCCCCChhHHhcCC-CeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHH
Q 015401 308 KHVRIPLLCIQAQNDPIAPSRGIPCEDIKANP-NCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEH 377 (407)
Q Consensus 308 ~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~ 377 (407)
+...||+|++.|+..+..... + +-..+..| ...+..++++|=+...|+|.. +++.+.=|++.
T Consensus 216 ~~~~c~vLlvvG~~Sp~~~~v-v-~~ns~Ldp~~ttllkv~dcGglV~eEqP~k------laea~~lFlQG 278 (283)
T PF03096_consen 216 PSLGCPVLLVVGDNSPHVDDV-V-EMNSKLDPTKTTLLKVADCGGLVLEEQPGK------LAEAFKLFLQG 278 (283)
T ss_dssp TTCCS-EEEEEETTSTTHHHH-H-HHHHHS-CCCEEEEEETT-TT-HHHH-HHH------HHHHHHHHHHH
T ss_pred CCCCCCeEEEEecCCcchhhH-H-HHHhhcCcccceEEEecccCCcccccCcHH------HHHHHHHHHcc
Confidence 777899999999998765421 1 22223333 578899999999999999998 88999888875
No 111
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.22 E-value=1.6e-10 Score=100.92 Aligned_cols=99 Identities=14% Similarity=0.182 Sum_probs=77.2
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhC---------CcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhh
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSK---------GWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSK 182 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~---------g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~ 182 (407)
.-.+|+++|||+|+..+.| .++..|... -|.||++.+||+|.|+.++..... +.....++..|-.+
T Consensus 151 ~v~PlLl~HGwPGsv~EFy--kfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~GFn---~~a~ArvmrkLMlR 225 (469)
T KOG2565|consen 151 KVKPLLLLHGWPGSVREFY--KFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTGFN---AAATARVMRKLMLR 225 (469)
T ss_pred cccceEEecCCCchHHHHH--hhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCCcc---HHHHHHHHHHHHHH
Confidence 3457999999999888755 555555443 389999999999999877654333 44556677777777
Q ss_pred CCCCcEEEEEechhHHHHHHHHhccCCCCCceeEE
Q 015401 183 YPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAV 217 (407)
Q Consensus 183 ~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v 217 (407)
.+..++++-|..+|+.|+.++|..+|++ |.|.=
T Consensus 226 Lg~nkffiqGgDwGSiI~snlasLyPen--V~GlH 258 (469)
T KOG2565|consen 226 LGYNKFFIQGGDWGSIIGSNLASLYPEN--VLGLH 258 (469)
T ss_pred hCcceeEeecCchHHHHHHHHHhhcchh--hhHhh
Confidence 7777999999999999999999999998 76643
No 112
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.21 E-value=2.8e-11 Score=103.73 Aligned_cols=102 Identities=16% Similarity=0.154 Sum_probs=71.4
Q ss_pred EEEeCCCCCC--CccHHHHHHHHHHHh-CCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhh-----CCCCc
Q 015401 116 LILMPGLTGG--SEDSYVRHMLLRARS-KGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSK-----YPKAH 187 (407)
Q Consensus 116 vv~lHG~~g~--~~~~~~~~~~~~l~~-~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~-----~~~~~ 187 (407)
||++||.+-. ..+.. +.++..+.+ .|+.|+++|+|=. ++.......+|+.++++++..+ +...+
T Consensus 1 v~~~HGGg~~~g~~~~~-~~~~~~la~~~g~~v~~~~Yrl~-------p~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~ 72 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESH-WPFAARLAAERGFVVVSIDYRLA-------PEAPFPAALEDVKAAYRWLLKNADKLGIDPER 72 (211)
T ss_dssp EEEE--STTTSCGTTTH-HHHHHHHHHHHTSEEEEEE---T-------TTSSTTHHHHHHHHHHHHHHHTHHHHTEEEEE
T ss_pred CEEECCcccccCChHHH-HHHHHHHHhhccEEEEEeecccc-------ccccccccccccccceeeeccccccccccccc
Confidence 7899994321 22222 455555654 8999999999932 3344567789999999999887 55679
Q ss_pred EEEEEechhHHHHHHHHhccCCC--CCceeEEEEcCCCCH
Q 015401 188 LYAVGWSLGANILIRYLGHESHS--CPLSGAVSLCNPFNL 225 (407)
Q Consensus 188 v~lvG~S~Gg~ia~~~a~~~p~~--~~v~~~v~l~~p~~~ 225 (407)
|+++|+|.||.+++.++....+. ..+++++++++..++
T Consensus 73 i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 73 IVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred eEEeecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 99999999999999998755432 238899999987654
No 113
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.18 E-value=5.9e-11 Score=83.20 Aligned_cols=76 Identities=17% Similarity=0.370 Sum_probs=54.6
Q ss_pred CCEEEEE-eecCCCCCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCC-cccCCChhH
Q 015401 94 DGSVALD-WISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQ-FYSASFLGD 171 (407)
Q Consensus 94 g~~~~~~-~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~-~~~~~~~~D 171 (407)
|..+.+. |.+.. +.+.+|+++||++..+. . +..++..|.++||.|+++|+||||.|+..... ...+.+++|
T Consensus 1 G~~L~~~~w~p~~-----~~k~~v~i~HG~~eh~~-r-y~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D 73 (79)
T PF12146_consen 1 GTKLFYRRWKPEN-----PPKAVVVIVHGFGEHSG-R-YAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDD 73 (79)
T ss_pred CcEEEEEEecCCC-----CCCEEEEEeCCcHHHHH-H-HHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHH
Confidence 3455554 44433 15899999999976554 4 48899999999999999999999999853322 233556667
Q ss_pred HHHHH
Q 015401 172 MQEVV 176 (407)
Q Consensus 172 l~~~l 176 (407)
+..++
T Consensus 74 ~~~~~ 78 (79)
T PF12146_consen 74 LHQFI 78 (79)
T ss_pred HHHHh
Confidence 76665
No 114
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.17 E-value=1.1e-09 Score=93.83 Aligned_cols=101 Identities=18% Similarity=0.210 Sum_probs=76.8
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhC-------
Q 015401 111 PDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKY------- 183 (407)
Q Consensus 111 ~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~------- 183 (407)
+.-|+|||+||+. ... .+...+...+.+.||-|+.+|+...+.. ......+++.++++|+....
T Consensus 15 g~yPVv~f~~G~~-~~~-s~Ys~ll~hvAShGyIVV~~d~~~~~~~-------~~~~~~~~~~~vi~Wl~~~L~~~l~~~ 85 (259)
T PF12740_consen 15 GTYPVVLFLHGFL-LIN-SWYSQLLEHVASHGYIVVAPDLYSIGGP-------DDTDEVASAAEVIDWLAKGLESKLPLG 85 (259)
T ss_pred CCcCEEEEeCCcC-CCH-HHHHHHHHHHHhCceEEEEecccccCCC-------CcchhHHHHHHHHHHHHhcchhhcccc
Confidence 4789999999987 444 4458899999999999999997664331 12233677788888866532
Q ss_pred ---CCCcEEEEEechhHHHHHHHHhcc-----CCCCCceeEEEEcCC
Q 015401 184 ---PKAHLYAVGWSLGANILIRYLGHE-----SHSCPLSGAVSLCNP 222 (407)
Q Consensus 184 ---~~~~v~lvG~S~Gg~ia~~~a~~~-----p~~~~v~~~v~l~~p 222 (407)
...++.++|||-||-++..++..+ +.+ +++++++++.
T Consensus 86 v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~--~~ali~lDPV 130 (259)
T PF12740_consen 86 VKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLR--FSALILLDPV 130 (259)
T ss_pred ccccccceEEeeeCCCCHHHHHHHhhhcccccccc--eeEEEEeccc
Confidence 124899999999999999999887 334 9999998864
No 115
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.16 E-value=5.3e-10 Score=97.16 Aligned_cols=103 Identities=18% Similarity=0.254 Sum_probs=71.9
Q ss_pred cEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEEEe
Q 015401 114 PVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGW 193 (407)
Q Consensus 114 p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~ 193 (407)
++|+++|+.+|+.. .| ..++..+....+.|+.++.+|.+... ... ..+.+-+...++.+....+..++.|+||
T Consensus 1 ~~lf~~p~~gG~~~-~y-~~la~~l~~~~~~v~~i~~~~~~~~~--~~~---~si~~la~~y~~~I~~~~~~gp~~L~G~ 73 (229)
T PF00975_consen 1 RPLFCFPPAGGSAS-SY-RPLARALPDDVIGVYGIEYPGRGDDE--PPP---DSIEELASRYAEAIRARQPEGPYVLAGW 73 (229)
T ss_dssp -EEEEESSTTCSGG-GG-HHHHHHHTTTEEEEEEECSTTSCTTS--HEE---SSHHHHHHHHHHHHHHHTSSSSEEEEEE
T ss_pred CeEEEEcCCccCHH-HH-HHHHHhCCCCeEEEEEEecCCCCCCC--CCC---CCHHHHHHHHHHHhhhhCCCCCeeehcc
Confidence 46999999888554 44 67776664435999999999998322 111 2223334556666776666679999999
Q ss_pred chhHHHHHHHHhccCCC-CCceeEEEEcCCC
Q 015401 194 SLGANILIRYLGHESHS-CPLSGAVSLCNPF 223 (407)
Q Consensus 194 S~Gg~ia~~~a~~~p~~-~~v~~~v~l~~p~ 223 (407)
|+||.+|..+|.+--+. ..+..+++++++.
T Consensus 74 S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~ 104 (229)
T PF00975_consen 74 SFGGILAFEMARQLEEAGEEVSRLILIDSPP 104 (229)
T ss_dssp THHHHHHHHHHHHHHHTT-SESEEEEESCSS
T ss_pred CccHHHHHHHHHHHHHhhhccCceEEecCCC
Confidence 99999999998764332 1288899998654
No 116
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.15 E-value=1.6e-09 Score=98.71 Aligned_cols=129 Identities=16% Similarity=0.110 Sum_probs=88.4
Q ss_pred EcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCC--CCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCC
Q 015401 90 RTKDDGSVALDWISGDHQLLPPDSPVLILMPGLT--GGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSAS 167 (407)
Q Consensus 90 ~~~dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~--g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~ 167 (407)
...++..+.++++.+. .......|+||++||.+ .++.+.........+...|+.|+++|+|-. ++..+..
T Consensus 57 ~~~~~~~~~~~~y~p~-~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrla-------Pe~~~p~ 128 (312)
T COG0657 57 AGPSGDGVPVRVYRPD-RKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLA-------PEHPFPA 128 (312)
T ss_pred cCCCCCceeEEEECCC-CCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCC-------CCCCCCc
Confidence 3455555777776661 12234689999999932 222222223444456678999999999933 3445667
Q ss_pred ChhHHHHHHHHHHhhC-----CCCcEEEEEechhHHHHHHHHhccCCC--CCceeEEEEcCCCCHH
Q 015401 168 FLGDMQEVVAHVGSKY-----PKAHLYAVGWSLGANILIRYLGHESHS--CPLSGAVSLCNPFNLV 226 (407)
Q Consensus 168 ~~~Dl~~~l~~l~~~~-----~~~~v~lvG~S~Gg~ia~~~a~~~p~~--~~v~~~v~l~~p~~~~ 226 (407)
..+|+.+.+.++..+. ..++|.++|+|.||++++.++..-.++ ....+.+++++..+..
T Consensus 129 ~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~ 194 (312)
T COG0657 129 ALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLT 194 (312)
T ss_pred hHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCc
Confidence 7899999999988653 256899999999999999888765532 2267888888766644
No 117
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.14 E-value=6e-10 Score=98.20 Aligned_cols=109 Identities=17% Similarity=0.300 Sum_probs=81.6
Q ss_pred CcEEEEeCCCCCCCccHHHHHHHHHHH---hCCcEEEEEeCCCCCCCCCC------CCCcccCCChhHHHHHHHHHHhhC
Q 015401 113 SPVLILMPGLTGGSEDSYVRHMLLRAR---SKGWRVVVFNSRGCGDSPVT------TPQFYSASFLGDMQEVVAHVGSKY 183 (407)
Q Consensus 113 ~p~vv~lHG~~g~~~~~~~~~~~~~l~---~~g~~vi~~D~rG~G~S~~~------~~~~~~~~~~~Dl~~~l~~l~~~~ 183 (407)
+..+|+++|.+|-. .|...++..+. ...|.|+++.+.||..++.. ...++.++.++-..++++.+....
T Consensus 2 ~~li~~IPGNPGlv--~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~ 79 (266)
T PF10230_consen 2 RPLIVFIPGNPGLV--EFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQK 79 (266)
T ss_pred cEEEEEECCCCChH--HHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhh
Confidence 57899999999855 44467766665 45899999999999877543 123444555555566666666554
Q ss_pred --CCCcEEEEEechhHHHHHHHHhccC-CCCCceeEEEEcCCC
Q 015401 184 --PKAHLYAVGWSLGANILIRYLGHES-HSCPLSGAVSLCNPF 223 (407)
Q Consensus 184 --~~~~v~lvG~S~Gg~ia~~~a~~~p-~~~~v~~~v~l~~p~ 223 (407)
+..+++++|||.|++++++++.+.+ ....|.+++++.|..
T Consensus 80 ~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 80 NKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred cCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 5679999999999999999999999 222399999998764
No 118
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.11 E-value=2.4e-09 Score=107.18 Aligned_cols=233 Identities=18% Similarity=0.177 Sum_probs=140.1
Q ss_pred EEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCc--cHHH-HHHHHHHHhCCcEEEEEeCCCCCCCCCCCCC
Q 015401 86 RECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSE--DSYV-RHMLLRARSKGWRVVVFNSRGCGDSPVTTPQ 162 (407)
Q Consensus 86 r~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~--~~~~-~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~ 162 (407)
-..+.. ||....+....|+.-.....-|.||.+||.+++.. +.+. ..........|+.|+.+|.||.|........
T Consensus 500 ~~~i~~-~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~ 578 (755)
T KOG2100|consen 500 FGKIEI-DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRS 578 (755)
T ss_pred eEEEEe-ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHH
Confidence 334444 66666555554532222235688999999876221 1111 1111235678999999999999876432111
Q ss_pred ----cccCCChhHHHHHHHHHHhhC--CCCcEEEEEechhHHHHHHHHhccC-CCCCceeEEEEcCCCCHHHHHHHHhcc
Q 015401 163 ----FYSASFLGDMQEVVAHVGSKY--PKAHLYAVGWSLGANILIRYLGHES-HSCPLSGAVSLCNPFNLVIADQDFRKG 235 (407)
Q Consensus 163 ----~~~~~~~~Dl~~~l~~l~~~~--~~~~v~lvG~S~Gg~ia~~~a~~~p-~~~~v~~~v~l~~p~~~~~~~~~~~~~ 235 (407)
---..-++|...+++.+.... ...++.++|+|+||.+++..+...+ +. +++++.++|..+...-....
T Consensus 579 ~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~--fkcgvavaPVtd~~~yds~~--- 653 (755)
T KOG2100|consen 579 ALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDV--FKCGVAVAPVTDWLYYDSTY--- 653 (755)
T ss_pred HhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCce--EEEEEEecceeeeeeecccc---
Confidence 111234667777777766542 3459999999999999999999997 44 66668888765421100000
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHhcCCCHHHHhhccccccCCCCCHH-HHHhhCCcchhcCCCccce
Q 015401 236 FNIVYDKALASALCRIFKKHALLFEDMGGEFNIPLAANAKSVRQFDDGLTRVSFGFKSVD-DYYSNSSSSDSIKHVRIPL 314 (407)
Q Consensus 236 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~i~~Pv 314 (407)
+....+..... .-|...+....+..++.|.
T Consensus 654 -------------------------------------------------terymg~p~~~~~~y~e~~~~~~~~~~~~~~ 684 (755)
T KOG2100|consen 654 -------------------------------------------------TERYMGLPSENDKGYEESSVSSPANNIKTPK 684 (755)
T ss_pred -------------------------------------------------cHhhcCCCccccchhhhccccchhhhhccCC
Confidence 00000111111 1144455556667777776
Q ss_pred -eeeecCCCCCCCCCCCC---hhHHhcCCCeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHHH
Q 015401 315 -LCIQAQNDPIAPSRGIP---CEDIKANPNCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEHL 378 (407)
Q Consensus 315 -lii~g~~D~~~~~~~~~---~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~~ 378 (407)
|++||+.|..++.+... +.+....-..++.++|+.+|......... -+...+..|+..+
T Consensus 685 ~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~-----~~~~~~~~~~~~~ 747 (755)
T KOG2100|consen 685 LLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVIS-----HLYEKLDRFLRDC 747 (755)
T ss_pred EEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchH-----HHHHHHHHHHHHH
Confidence 99999999999877542 24444444589999999999644433222 1667788888844
No 119
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.09 E-value=8e-09 Score=92.76 Aligned_cols=251 Identities=14% Similarity=0.093 Sum_probs=133.2
Q ss_pred EEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCC---CCCccHHHHHHHHHH-HhCCcEEEEEeCCCCCCCCCCCCCc
Q 015401 88 CIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLT---GGSEDSYVRHMLLRA-RSKGWRVVVFNSRGCGDSPVTTPQF 163 (407)
Q Consensus 88 ~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~---g~~~~~~~~~~~~~l-~~~g~~vi~~D~rG~G~S~~~~~~~ 163 (407)
.+.....+.+.++.+.+.........|.||++||.+ |+........+...+ .+.+..|+.+|+| . .++.
T Consensus 65 dv~~~~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYR---L----APEh 137 (336)
T KOG1515|consen 65 DVTIDPFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYR---L----APEH 137 (336)
T ss_pred eeEecCCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcc---c----CCCC
Confidence 344444556666655555322225789999999943 222223334555554 5678999999999 2 2333
Q ss_pred ccCCChhHHHHHHHHHHhh------CCCCcEEEEEechhHHHHHHHHhccCC----CCCceeEEEEcCCCCHHHHHH---
Q 015401 164 YSASFLGDMQEVVAHVGSK------YPKAHLYAVGWSLGANILIRYLGHESH----SCPLSGAVSLCNPFNLVIADQ--- 230 (407)
Q Consensus 164 ~~~~~~~Dl~~~l~~l~~~------~~~~~v~lvG~S~Gg~ia~~~a~~~p~----~~~v~~~v~l~~p~~~~~~~~--- 230 (407)
......+|...++.++... ...++++++|-|.||++|..+|.+.-+ ...+++.|++.|-+.......
T Consensus 138 ~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~ 217 (336)
T KOG1515|consen 138 PFPAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEK 217 (336)
T ss_pred CCCccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHH
Confidence 3444556777777766553 234589999999999999988765432 234999999988653222111
Q ss_pred HHhcchhHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHhcCCCHHHHhhccccccCCCCCHHHHHhhCCcchhcCCC
Q 015401 231 DFRKGFNIVYDKALASALCRIFKKHALLFEDMGGEFNIPLAANAKSVRQFDDGLTRVSFGFKSVDDYYSNSSSSDSIKHV 310 (407)
Q Consensus 231 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 310 (407)
.................+.+. . .+.... ..+..+..+.. . .........
T Consensus 218 ~~~~~~~~~~~~~~~~~~w~~------~---lP~~~~-----------~~~~p~~np~~---------~--~~~~d~~~~ 266 (336)
T KOG1515|consen 218 QQNLNGSPELARPKIDKWWRL------L---LPNGKT-----------DLDHPFINPVG---------N--SLAKDLSGL 266 (336)
T ss_pred HHhhcCCcchhHHHHHHHHHH------h---CCCCCC-----------CcCCccccccc---------c--ccccCcccc
Confidence 100000000000000000000 0 000000 00000000000 0 001122233
Q ss_pred cc-ceeeeecCCCCCCCCCCC-ChhHHhcCCCeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHH
Q 015401 311 RI-PLLCIQAQNDPIAPSRGI-PCEDIKANPNCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEH 377 (407)
Q Consensus 311 ~~-Pvlii~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~ 377 (407)
.+ |+|++.++.|.+....-. .+.+.+..-.+++.+++++.|..++-.+.. ....-+.+.+.+|++.
T Consensus 267 ~lp~tlv~~ag~D~L~D~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~-~~a~~~~~~i~~fi~~ 334 (336)
T KOG1515|consen 267 GLPPTLVVVAGYDVLRDEGLAYAEKLKKAGVEVTLIHYEDGFHGFHILDPSS-KEAHALMDAIVEFIKS 334 (336)
T ss_pred CCCceEEEEeCchhhhhhhHHHHHHHHHcCCeEEEEEECCCeeEEEecCCch-hhHHHHHHHHHHHHhh
Confidence 34 599999999998864422 145556666778888999999999887751 0111134445555543
No 120
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.08 E-value=2.4e-10 Score=102.06 Aligned_cols=127 Identities=13% Similarity=0.148 Sum_probs=71.3
Q ss_pred EEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHH-----------------HHHHHHHHHhCCcEEEEEeCC
Q 015401 89 IRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSY-----------------VRHMLLRARSKGWRVVVFNSR 151 (407)
Q Consensus 89 ~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~-----------------~~~~~~~l~~~g~~vi~~D~r 151 (407)
|.+.++..+......|+. ..++.|.||++||-+++. +.. -......++++||-|+++|.+
T Consensus 93 f~~~p~~~vpaylLvPd~--~~~p~PAVL~lHgHg~~K-e~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~ 169 (390)
T PF12715_consen 93 FNTTPGSRVPAYLLVPDG--AKGPFPAVLCLHGHGGGK-EKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDAL 169 (390)
T ss_dssp E--STTB-EEEEEEEETT----S-EEEEEEE--TT--H-HHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--T
T ss_pred EEccCCeeEEEEEEecCC--CCCCCCEEEEeCCCCCCc-ccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccc
Confidence 334455555555455552 245679999999965432 110 123466789999999999999
Q ss_pred CCCCCCCCCCCcc--cC---C---------------ChhHHHHHHHHHHhhC--CCCcEEEEEechhHHHHHHHHhccCC
Q 015401 152 GCGDSPVTTPQFY--SA---S---------------FLGDMQEVVAHVGSKY--PKAHLYAVGWSLGANILIRYLGHESH 209 (407)
Q Consensus 152 G~G~S~~~~~~~~--~~---~---------------~~~Dl~~~l~~l~~~~--~~~~v~lvG~S~Gg~ia~~~a~~~p~ 209 (407)
|+|.......... .. . .+.|...++++|...- ...+|.++|+||||..++.+++..+.
T Consensus 170 g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALDdR 249 (390)
T PF12715_consen 170 GFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALDDR 249 (390)
T ss_dssp TSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH-TT
T ss_pred cccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcchh
Confidence 9997643221100 00 0 1235555777777642 23599999999999999999988776
Q ss_pred CCCceeEEEEcC
Q 015401 210 SCPLSGAVSLCN 221 (407)
Q Consensus 210 ~~~v~~~v~l~~ 221 (407)
|++.|+.+-
T Consensus 250 ---Ika~v~~~~ 258 (390)
T PF12715_consen 250 ---IKATVANGY 258 (390)
T ss_dssp -----EEEEES-
T ss_pred ---hHhHhhhhh
Confidence 888887654
No 121
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.07 E-value=1.2e-09 Score=93.58 Aligned_cols=108 Identities=13% Similarity=0.126 Sum_probs=73.0
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHH--------hCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhC
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRAR--------SKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKY 183 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~--------~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~ 183 (407)
++.+||||||..|+.. .+ +.+...+. ...++++++|+......- .........+-+.+.++.+...+
T Consensus 3 ~g~pVlFIhG~~Gs~~-q~-rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~---~g~~l~~q~~~~~~~i~~i~~~~ 77 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYK-QV-RSLASELQRKALLNDNSSHFDFFTVDFNEELSAF---HGRTLQRQAEFLAEAIKYILELY 77 (225)
T ss_pred CCCEEEEECcCCCCHh-HH-HHHHHHHhhhhhhccCccceeEEEeccCcccccc---ccccHHHHHHHHHHHHHHHHHhh
Confidence 5688999999877654 32 44544432 235889999987643221 11223344556666777776655
Q ss_pred -----CCCcEEEEEechhHHHHHHHHhccCCC-CCceeEEEEcCCCC
Q 015401 184 -----PKAHLYAVGWSLGANILIRYLGHESHS-CPLSGAVSLCNPFN 224 (407)
Q Consensus 184 -----~~~~v~lvG~S~Gg~ia~~~a~~~p~~-~~v~~~v~l~~p~~ 224 (407)
+..++++|||||||.++..++...... ..|+.+|.+++|..
T Consensus 78 ~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~ 124 (225)
T PF07819_consen 78 KSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHR 124 (225)
T ss_pred hhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCC
Confidence 677999999999999998887654421 23999999999874
No 122
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=99.06 E-value=8.9e-10 Score=95.35 Aligned_cols=130 Identities=16% Similarity=0.208 Sum_probs=91.9
Q ss_pred CCCccEEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCC
Q 015401 81 DVKLKRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTT 160 (407)
Q Consensus 81 ~~~~~r~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~ 160 (407)
.-.-+|-.+...||.++..-+..+.....+.++..||++-|..|--. -.....-++.||.|+.+++||+++|.+..
T Consensus 211 ~~NG~R~kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFYE----vG~m~tP~~lgYsvLGwNhPGFagSTG~P 286 (517)
T KOG1553|consen 211 NKNGQRLKIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFYE----VGVMNTPAQLGYSVLGWNHPGFAGSTGLP 286 (517)
T ss_pred cCCCeEEEEeecCCcchhheeecCCCCCCCCCceEEEEecCCccceE----eeeecChHHhCceeeccCCCCccccCCCC
Confidence 34557888999999988766666554444556788999999766332 22333345679999999999999997654
Q ss_pred CCcccCCChhHHHHHHHHHHh--hCCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEc
Q 015401 161 PQFYSASFLGDMQEVVAHVGS--KYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLC 220 (407)
Q Consensus 161 ~~~~~~~~~~Dl~~~l~~l~~--~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~ 220 (407)
-.... ...+.++++.... .++...|++.|||.||..++.+|..||+ |+++|+-+
T Consensus 287 ~p~n~---~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd---VkavvLDA 342 (517)
T KOG1553|consen 287 YPVNT---LNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD---VKAVVLDA 342 (517)
T ss_pred Ccccc---hHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC---ceEEEeec
Confidence 32222 2223344444332 3566799999999999999999999999 88877644
No 123
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.06 E-value=4.3e-09 Score=93.98 Aligned_cols=236 Identities=19% Similarity=0.196 Sum_probs=119.7
Q ss_pred HHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhC------CCCcEEEEEechhHHHHHHH
Q 015401 130 YVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKY------PKAHLYAVGWSLGANILIRY 203 (407)
Q Consensus 130 ~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~------~~~~v~lvG~S~Gg~ia~~~ 203 (407)
+-..++..++++||.|++.|+.|.|. +- ..-.....++.+.+...+... ...++.++|||-||.-++..
T Consensus 14 ~e~~~l~~~L~~GyaVv~pDY~Glg~-~y----~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~A 88 (290)
T PF03583_consen 14 YEAPFLAAWLARGYAVVAPDYEGLGT-PY----LNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWA 88 (290)
T ss_pred hHHHHHHHHHHCCCEEEecCCCCCCC-cc----cCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHH
Confidence 44556677889999999999999987 11 111222333444444433221 24689999999999988766
Q ss_pred HhccCCC---CC--ceeEEEEcCCCCHHHHHHHHhcch-hHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCHH---HH--h
Q 015401 204 LGHESHS---CP--LSGAVSLCNPFNLVIADQDFRKGF-NIVYDKALASALCRIFKKHALLFEDMGGEFNIP---LA--A 272 (407)
Q Consensus 204 a~~~p~~---~~--v~~~v~l~~p~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---~~--~ 272 (407)
+...++. .+ +.+.+..++|.++........... ..+....+.. +......+...+...+... .. .
T Consensus 89 A~l~~~YApeL~~~l~Gaa~gg~~~dl~~~~~~~~~~~~~g~~~~~l~g----l~~~yP~l~~~~~~~l~~~g~~~~~~~ 164 (290)
T PF03583_consen 89 AELAPSYAPELNRDLVGAAAGGPPADLAALLRALNGGPFAGLVPYALLG----LAAAYPELDELLDSYLTPEGRALLDDA 164 (290)
T ss_pred HHHhHHhCcccccceeEEeccCCccCHHHHHhccCCCccHhHHHHHHHH----HHHhCccHHHHHHHHhhHHHHHHHHHH
Confidence 5443322 23 788888888887665444332211 1111111111 1100000000000000000 00 0
Q ss_pred cCCCHHHH-hh----cc-ccccCCCC---------CHHHHHhhCCc-chhcCCCccceeeeecCCCCCCCCCCCC---hh
Q 015401 273 NAKSVRQF-DD----GL-TRVSFGFK---------SVDDYYSNSSS-SDSIKHVRIPLLCIQAQNDPIAPSRGIP---CE 333 (407)
Q Consensus 273 ~~~~~~~~-~~----~~-~~~~~~~~---------~~~~~~~~~~~-~~~l~~i~~Pvlii~g~~D~~~~~~~~~---~~ 333 (407)
........ .. .+ ......+. .....+...+. ...-...++|++|.+|..|.++|..... +.
T Consensus 165 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~P~~Pv~i~~g~~D~vvP~~~~~~l~~~ 244 (290)
T PF03583_consen 165 RTRCLADIVAEYAFQDLFTGDTRYFKPGADLLADPAFRRALAENSLGMGGDWTPTVPVLIYQGTADEVVPPADTDALVAK 244 (290)
T ss_pred HhhhHHHHHHHhhhccccccchhccCChhhhhhhHHHHHHHHHhhccccCCCCCCCCEEEEecCCCCCCChHHHHHHHHH
Confidence 00000000 00 00 00000001 11122222222 0011233689999999999999987542 35
Q ss_pred HHhcC-CCeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHHHHHhcC
Q 015401 334 DIKAN-PNCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEHLERASS 383 (407)
Q Consensus 334 ~~~~~-~~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~~~~~~~ 383 (407)
+++.. .++++..++.++|....-.. .....+|+....+...
T Consensus 245 ~c~~G~a~V~~~~~~~~~H~~~~~~~---------~~~a~~Wl~~rf~G~~ 286 (290)
T PF03583_consen 245 WCAAGGADVEYVRYPGGGHLGAAFAS---------APDALAWLDDRFAGKP 286 (290)
T ss_pred HHHcCCCCEEEEecCCCChhhhhhcC---------cHHHHHHHHHHHCCCC
Confidence 66677 68999999999997543221 2556789988776553
No 124
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.05 E-value=1.1e-09 Score=87.92 Aligned_cols=218 Identities=16% Similarity=0.186 Sum_probs=127.8
Q ss_pred EEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCC--CCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcc
Q 015401 87 ECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLT--GGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFY 164 (407)
Q Consensus 87 ~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~--g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~ 164 (407)
+-+....|+.-.+|...+.. ..+..||+||.- .+..... -..+..+.+.||+|..+++- .++ ...+
T Consensus 46 e~l~Yg~~g~q~VDIwg~~~-----~~klfIfIHGGYW~~g~rk~c-lsiv~~a~~~gY~vasvgY~---l~~---q~ht 113 (270)
T KOG4627|consen 46 EHLRYGEGGRQLVDIWGSTN-----QAKLFIFIHGGYWQEGDRKMC-LSIVGPAVRRGYRVASVGYN---LCP---QVHT 113 (270)
T ss_pred hccccCCCCceEEEEecCCC-----CccEEEEEecchhhcCchhcc-cchhhhhhhcCeEEEEeccC---cCc---cccc
Confidence 34444445444555333332 679999999932 1111111 24455678899999998763 332 2223
Q ss_pred cCCChhHHHHHHHHHHhhCCCCc-EEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchhHHHHHH
Q 015401 165 SASFLGDMQEVVAHVGSKYPKAH-LYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNIVYDKA 243 (407)
Q Consensus 165 ~~~~~~Dl~~~l~~l~~~~~~~~-v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~~~~~~ 243 (407)
.+..+.|+...++++-+.+++.+ +.+-|||.|+.+++.+..+..+. +|.+++++|+.+++......
T Consensus 114 L~qt~~~~~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~p-rI~gl~l~~GvY~l~EL~~t------------ 180 (270)
T KOG4627|consen 114 LEQTMTQFTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSP-RIWGLILLCGVYDLRELSNT------------ 180 (270)
T ss_pred HHHHHHHHHHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHhcCc-hHHHHHHHhhHhhHHHHhCC------------
Confidence 45556778888888888787665 55667999999999887664322 28888888776543221000
Q ss_pred HHHHHHHHHHHHHhhhhhcCCCCCHHHHhcCCCHHHHhhccccccCCCCCHHHHHhhCC-cchhcCCCccceeeeecCCC
Q 015401 244 LASALCRIFKKHALLFEDMGGEFNIPLAANAKSVRQFDDGLTRVSFGFKSVDDYYSNSS-SSDSIKHVRIPLLCIQAQND 322 (407)
Q Consensus 244 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~i~~Pvlii~g~~D 322 (407)
+... ..+...... ...+ ....+..+++|++++.|++|
T Consensus 181 -------------------------------e~g~---------dlgLt~~~a--e~~Scdl~~~~~v~~~ilVv~~~~e 218 (270)
T KOG4627|consen 181 -------------------------------ESGN---------DLGLTERNA--ESVSCDLWEYTDVTVWILVVAAEHE 218 (270)
T ss_pred -------------------------------cccc---------ccCcccchh--hhcCccHHHhcCceeeeeEeeeccc
Confidence 0000 000000000 0001 11345778999999999998
Q ss_pred CCCCCCCCChhHHhcCCCeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHHH
Q 015401 323 PIAPSRGIPCEDIKANPNCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEHL 378 (407)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~~ 378 (407)
.---.+.. +........+.+..+++.+|+-.+++... =...+..|++++
T Consensus 219 spklieQn-rdf~~q~~~a~~~~f~n~~hy~I~~~~~~------~~s~~~~~~~~~ 267 (270)
T KOG4627|consen 219 SPKLIEQN-RDFADQLRKASFTLFKNYDHYDIIEETAI------DDSDVSRFLRNI 267 (270)
T ss_pred CcHHHHhh-hhHHHHhhhcceeecCCcchhhHHHHhcc------ccchHHHHHHHH
Confidence 53333333 45555666689999999999987776543 223455566554
No 125
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.04 E-value=7.7e-09 Score=87.47 Aligned_cols=108 Identities=14% Similarity=0.178 Sum_probs=73.0
Q ss_pred CCcEEEEeCCCCCCCccHHHHH--HHHHHHhCCcEEEEEeCCCCCCCC--C---CCCCcccCCChhHHHHHHHHHHhhCC
Q 015401 112 DSPVLILMPGLTGGSEDSYVRH--MLLRARSKGWRVVVFNSRGCGDSP--V---TTPQFYSASFLGDMQEVVAHVGSKYP 184 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~--~~~~l~~~g~~vi~~D~rG~G~S~--~---~~~~~~~~~~~~Dl~~~l~~l~~~~~ 184 (407)
..|+||++||.+++.. .+... +.....+.||-|+.++........ . .............+..+++++..+++
T Consensus 15 ~~PLVv~LHG~~~~a~-~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~ 93 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAE-DFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYN 93 (220)
T ss_pred CCCEEEEeCCCCCCHH-HHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhcc
Confidence 5699999999876553 33221 122334578999988854211110 0 00011112335567788888887765
Q ss_pred --CCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCC
Q 015401 185 --KAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNP 222 (407)
Q Consensus 185 --~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p 222 (407)
..+|++.|+|.||+++..++..+|+. |.++.++++.
T Consensus 94 iD~~RVyv~G~S~Gg~ma~~la~~~pd~--faa~a~~sG~ 131 (220)
T PF10503_consen 94 IDPSRVYVTGLSNGGMMANVLACAYPDL--FAAVAVVSGV 131 (220)
T ss_pred cCCCceeeEEECHHHHHHHHHHHhCCcc--ceEEEeeccc
Confidence 45999999999999999999999999 9888887764
No 126
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.00 E-value=3.7e-09 Score=85.48 Aligned_cols=102 Identities=17% Similarity=0.226 Sum_probs=81.2
Q ss_pred cEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEEEe
Q 015401 114 PVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGW 193 (407)
Q Consensus 114 p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~ 193 (407)
..+||+-|=+| +...-+.++..|.++|+.|+.+|.+-+=.+..+ .++.+.|+..++++...+.+.++++|+|+
T Consensus 3 t~~v~~SGDgG--w~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~rt-----P~~~a~Dl~~~i~~y~~~w~~~~vvLiGY 75 (192)
T PF06057_consen 3 TLAVFFSGDGG--WRDLDKQIAEALAKQGVPVVGVDSLRYFWSERT-----PEQTAADLARIIRHYRARWGRKRVVLIGY 75 (192)
T ss_pred EEEEEEeCCCC--chhhhHHHHHHHHHCCCeEEEechHHHHhhhCC-----HHHHHHHHHHHHHHHHHHhCCceEEEEee
Confidence 45788888654 335567888999999999999998766555432 34568999999999999999999999999
Q ss_pred chhHHHHHHHHhccCCC--CCceeEEEEcCC
Q 015401 194 SLGANILIRYLGHESHS--CPLSGAVSLCNP 222 (407)
Q Consensus 194 S~Gg~ia~~~a~~~p~~--~~v~~~v~l~~p 222 (407)
|+|+-+.-....+.|.. ..|..++++++.
T Consensus 76 SFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~ 106 (192)
T PF06057_consen 76 SFGADVLPFIYNRLPAALRARVAQVVLLSPS 106 (192)
T ss_pred cCCchhHHHHHhhCCHHHHhheeEEEEeccC
Confidence 99998888777777653 448899988764
No 127
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.00 E-value=4.3e-08 Score=83.56 Aligned_cols=125 Identities=14% Similarity=0.203 Sum_probs=75.6
Q ss_pred CCCCEEEEEeecCCCCCCCCCC-cEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCC---CCCCCC-----C
Q 015401 92 KDDGSVALDWISGDHQLLPPDS-PVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGD---SPVTTP-----Q 162 (407)
Q Consensus 92 ~dg~~~~~~~~~~~~~~~~~~~-p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~---S~~~~~-----~ 162 (407)
..|..+.+..+.|++-.....- |.|||+||.+..+.+.+ .. +..|.-.++.+.+-.+. ++.-.+ +
T Consensus 169 ~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~-~~-----l~sg~gaiawa~pedqcfVlAPQy~~if~d~e 242 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDND-KV-----LSSGIGAIAWAGPEDQCFVLAPQYNPIFADSE 242 (387)
T ss_pred ccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhh-hh-----hhcCccceeeecccCceEEEcccccccccccc
Confidence 4577888887766532222234 99999999765555443 11 22344455555544330 110000 0
Q ss_pred cccCCChhHHHHHHH-HHHhhCC--CCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCC
Q 015401 163 FYSASFLGDMQEVVA-HVGSKYP--KAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (407)
Q Consensus 163 ~~~~~~~~Dl~~~l~-~l~~~~~--~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~ 224 (407)
-..........+++. .+..+|. .++|+++|.|+||+-++.++.++|+. +.+++.+++..+
T Consensus 243 ~~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdf--FAaa~~iaG~~d 305 (387)
T COG4099 243 EKTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDF--FAAAVPIAGGGD 305 (387)
T ss_pred cccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchh--hheeeeecCCCc
Confidence 011222233334443 4444443 46999999999999999999999999 999999998764
No 128
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.97 E-value=4.5e-08 Score=90.08 Aligned_cols=113 Identities=15% Similarity=0.150 Sum_probs=78.0
Q ss_pred ecCCCCCCCCCCcEEEEe-----C--CCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHH
Q 015401 102 ISGDHQLLPPDSPVLILM-----P--GLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQE 174 (407)
Q Consensus 102 ~~~~~~~~~~~~p~vv~l-----H--G~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~ 174 (407)
.++++....+.++++|++ | |++|...+ ..+-..+..|+.|+.+.+. +.+.+..+.++...-..+
T Consensus 57 ~pp~~~~~d~~krP~vViDPRAGHGpGIGGFK~d----SevG~AL~~GHPvYFV~F~-----p~P~pgQTl~DV~~ae~~ 127 (581)
T PF11339_consen 57 TPPEGVPVDPTKRPFVVIDPRAGHGPGIGGFKPD----SEVGVALRAGHPVYFVGFF-----PEPEPGQTLEDVMRAEAA 127 (581)
T ss_pred ECCCCCCCCCCCCCeEEeCCCCCCCCCccCCCcc----cHHHHHHHcCCCeEEEEec-----CCCCCCCcHHHHHHHHHH
Confidence 344433333445555555 3 34443332 3344456779999988774 223445566666666788
Q ss_pred HHHHHHhhCCCC-cEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCH
Q 015401 175 VVAHVGSKYPKA-HLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNL 225 (407)
Q Consensus 175 ~l~~l~~~~~~~-~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~ 225 (407)
+++.+....|.. +.+++|-+.||+.++.+|+.+|+. +..+|+-++|.+.
T Consensus 128 Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~--~gplvlaGaPlsy 177 (581)
T PF11339_consen 128 FVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDL--VGPLVLAGAPLSY 177 (581)
T ss_pred HHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCc--cCceeecCCCccc
Confidence 889998888865 999999999999999999999998 7777777777653
No 129
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.96 E-value=6.1e-09 Score=82.20 Aligned_cols=92 Identities=13% Similarity=0.223 Sum_probs=58.5
Q ss_pred cEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEEEe
Q 015401 114 PVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGW 193 (407)
Q Consensus 114 p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~ 193 (407)
+.+|++||+.++...+|.......+.. +-.++.. +. ..-..++|++ ++-+.+... ..+++||+|
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~~----a~rveq~-----~w--~~P~~~dWi~---~l~~~v~a~--~~~~vlVAH 66 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALPN----ARRVEQD-----DW--EAPVLDDWIA---RLEKEVNAA--EGPVVLVAH 66 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCcc----chhcccC-----CC--CCCCHHHHHH---HHHHHHhcc--CCCeEEEEe
Confidence 569999999998876775444333221 2222221 00 1112233433 344444433 237999999
Q ss_pred chhHHHHHHHHhccCCCCCceeEEEEcCCC
Q 015401 194 SLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (407)
Q Consensus 194 S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~ 223 (407)
|+|+.++++++.+.... |.|++++++|.
T Consensus 67 SLGc~~v~h~~~~~~~~--V~GalLVAppd 94 (181)
T COG3545 67 SLGCATVAHWAEHIQRQ--VAGALLVAPPD 94 (181)
T ss_pred cccHHHHHHHHHhhhhc--cceEEEecCCC
Confidence 99999999999888776 99999999864
No 130
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.96 E-value=1.2e-08 Score=85.65 Aligned_cols=103 Identities=17% Similarity=0.148 Sum_probs=78.1
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhC----C--
Q 015401 111 PDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKY----P-- 184 (407)
Q Consensus 111 ~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~----~-- 184 (407)
+.-|+|+|+||+.- .+ .|+..+...+.+.||-|+++++-..-. ....+.+++..++++|+.... |
T Consensus 44 G~yPVilF~HG~~l-~n-s~Ys~lL~HIASHGfIVVAPQl~~~~~-------p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~ 114 (307)
T PF07224_consen 44 GTYPVILFLHGFNL-YN-SFYSQLLAHIASHGFIVVAPQLYTLFP-------PDGQDEIKSAASVINWLPEGLQHVLPEN 114 (307)
T ss_pred CCccEEEEeechhh-hh-HHHHHHHHHHhhcCeEEEechhhcccC-------CCchHHHHHHHHHHHHHHhhhhhhCCCC
Confidence 47799999999864 33 556888899999999999999964311 112334678888888887643 1
Q ss_pred ----CCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCC
Q 015401 185 ----KAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNP 222 (407)
Q Consensus 185 ----~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p 222 (407)
..++.++|||.||-.|..+|..+.....+.++|.+.+.
T Consensus 115 V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV 156 (307)
T PF07224_consen 115 VEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPV 156 (307)
T ss_pred cccccceEEEeecCCccHHHHHHHhcccccCchhheeccccc
Confidence 35899999999999999999887644458888887754
No 131
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.94 E-value=1.8e-09 Score=95.88 Aligned_cols=204 Identities=15% Similarity=0.169 Sum_probs=119.0
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCC--CCCCCCCCC---cc---cCCChhHHHHHHHHHHhh-
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGC--GDSPVTTPQ---FY---SASFLGDMQEVVAHVGSK- 182 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~--G~S~~~~~~---~~---~~~~~~Dl~~~l~~l~~~- 182 (407)
..|+|++-||.++... .+ ..++..+.+.||-|.++|.+|- |+.+..... +. +.+-..|+..+++.|...
T Consensus 70 ~~PlvvlshG~Gs~~~-~f-~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~ 147 (365)
T COG4188 70 LLPLVVLSHGSGSYVT-GF-AWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLT 147 (365)
T ss_pred cCCeEEecCCCCCCcc-ch-hhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhh
Confidence 6799999999866544 44 6788899999999999999984 443321111 11 234567888898888766
Q ss_pred ----C----CCCcEEEEEechhHHHHHHHHhccCCCCCceeEEE-------EcCCCCHHHHHHHHhcchhHHHHHHHHHH
Q 015401 183 ----Y----PKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVS-------LCNPFNLVIADQDFRKGFNIVYDKALASA 247 (407)
Q Consensus 183 ----~----~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~-------l~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (407)
. ...+|.++|||+||+.++..++-+.+. ..+.- ++...+......
T Consensus 148 ~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~---~~~~~~C~~~~~~~~~~~~~~~~~----------------- 207 (365)
T COG4188 148 ASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELDA---EALLQHCESASRICLDPPGLNGRL----------------- 207 (365)
T ss_pred cCcccccccCccceEEEecccccHHHHHhccccccH---HHHHHHhhhhhhcccCCCCcChhh-----------------
Confidence 1 135899999999999999998777653 11110 011000000000
Q ss_pred HHHHHHHHHhhhhhcCCCCCHHHHh-cCCCHHH-Hh-hccccccCCCCCHHHHHhhCCcchhcCCCccceeeeecCCCCC
Q 015401 248 LCRIFKKHALLFEDMGGEFNIPLAA-NAKSVRQ-FD-DGLTRVSFGFKSVDDYYSNSSSSDSIKHVRIPLLCIQAQNDPI 324 (407)
Q Consensus 248 l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~ 324 (407)
............... ....++. +. .-.....|+ ..-+.++++|++++.|..|.+
T Consensus 208 ----------l~q~~av~~~~~~~~~rDpriravvA~~p~~~~~Fg-------------~tgl~~v~~P~~~~a~s~D~~ 264 (365)
T COG4188 208 ----------LNQCAAVWLPRQAYDLRDPRIRAVVAINPALGMIFG-------------TTGLVKVTDPVLLAAGSADGF 264 (365)
T ss_pred ----------hccccccccchhhhccccccceeeeeccCCcccccc-------------cccceeeecceeeeccccccc
Confidence 000000000000000 0000000 00 000111111 245678899999999999998
Q ss_pred CCCCCCChhHHhcCCCe--EEEEcCCCCceeecCCCCC
Q 015401 325 APSRGIPCEDIKANPNC--LLILTPKGGHLGWVAGPEA 360 (407)
Q Consensus 325 ~~~~~~~~~~~~~~~~~--~~~~~~~~gH~~~~~~p~~ 360 (407)
.|+..-........++. .+..++++.|+.+++-..+
T Consensus 265 aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~ 302 (365)
T COG4188 265 APPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELCKE 302 (365)
T ss_pred CCcccccccccccCCcchhheeecCCCccccccccCcc
Confidence 88764433444555555 7888999999999988765
No 132
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.93 E-value=2.9e-09 Score=92.12 Aligned_cols=111 Identities=23% Similarity=0.350 Sum_probs=72.2
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHH-hCCc--E--EEEEeCCCC----CCCCC--CCC--C--------cccCCChh
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRAR-SKGW--R--VVVFNSRGC----GDSPV--TTP--Q--------FYSASFLG 170 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~-~~g~--~--vi~~D~rG~----G~S~~--~~~--~--------~~~~~~~~ 170 (407)
...+.||+||++|+..+ +..++..+. +.|. . ++-++.-|. |.-.. ..| . .+....+.
T Consensus 10 ~~tPTifihG~~gt~~s--~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~ 87 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANS--FNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAK 87 (255)
T ss_dssp S-EEEEEE--TTGGCCC--CHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHH
T ss_pred CCCcEEEECCCCCChhH--HHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHH
Confidence 45679999999887764 478888886 6654 2 344444443 21111 111 0 11223467
Q ss_pred HHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCCC---CceeEEEEcCCCC
Q 015401 171 DMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSC---PLSGAVSLCNPFN 224 (407)
Q Consensus 171 Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~---~v~~~v~l~~p~~ 224 (407)
.+..++.+|+.+|.-.++.+|||||||..++.|+..+.... .+..+|.|++|++
T Consensus 88 wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfn 144 (255)
T PF06028_consen 88 WLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFN 144 (255)
T ss_dssp HHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TT
T ss_pred HHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccC
Confidence 88999999999999999999999999999999998865432 4899999999986
No 133
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.92 E-value=1.3e-07 Score=90.07 Aligned_cols=137 Identities=16% Similarity=0.090 Sum_probs=86.9
Q ss_pred ccEEEEEcCC---CCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHHHHHHHH-----------HH------HhCCc
Q 015401 84 LKRECIRTKD---DGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLL-----------RA------RSKGW 143 (407)
Q Consensus 84 ~~r~~~~~~d---g~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~~~~-----------~l------~~~g~ 143 (407)
....++...+ +..+.+.+++.. ..+.+.|+||+++|.+|.+. .+ -.+.+ .+ -.+..
T Consensus 47 ~~sGy~~v~~~~~~~~lFyw~~~s~--~~~~~~Pl~lwlnGGPG~ss-~~-G~f~E~GP~~i~~~~~~~~~n~~sW~~~~ 122 (462)
T PTZ00472 47 QWSGYFDIPGNQTDKHYFYWAFGPR--NGNPEAPVLLWMTGGPGCSS-MF-ALLAENGPCLMNETTGDIYNNTYSWNNEA 122 (462)
T ss_pred ceeEEEEeCCCCCCceEEEEEEEcC--CCCCCCCEEEEECCCCcHHH-HH-hhhccCCCeEEeCCCCceeECCccccccc
Confidence 3456677754 344554444433 23568899999999988763 21 11100 01 01236
Q ss_pred EEEEEeCC-CCCCCCCCCCC--cccCCChhHHHHHHHHHHhhCCC---CcEEEEEechhHHHHHHHHhccC------C--
Q 015401 144 RVVVFNSR-GCGDSPVTTPQ--FYSASFLGDMQEVVAHVGSKYPK---AHLYAVGWSLGANILIRYLGHES------H-- 209 (407)
Q Consensus 144 ~vi~~D~r-G~G~S~~~~~~--~~~~~~~~Dl~~~l~~l~~~~~~---~~v~lvG~S~Gg~ia~~~a~~~p------~-- 209 (407)
.++.+|.| |+|.|-..... .+.+..++|+.++++.+-.++|. .+++|+|+|+||..+..+|.+-- +
T Consensus 123 ~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~ 202 (462)
T PTZ00472 123 YVIYVDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGL 202 (462)
T ss_pred CeEEEeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCc
Confidence 88999975 88888543222 23356788999999888766664 79999999999999887776531 1
Q ss_pred CCCceeEEEEcCCCC
Q 015401 210 SCPLSGAVSLCNPFN 224 (407)
Q Consensus 210 ~~~v~~~v~l~~p~~ 224 (407)
.-+++++++.++-.+
T Consensus 203 ~inLkGi~IGNg~~d 217 (462)
T PTZ00472 203 YINLAGLAVGNGLTD 217 (462)
T ss_pred eeeeEEEEEeccccC
Confidence 124777777665443
No 134
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.89 E-value=3.6e-07 Score=80.22 Aligned_cols=136 Identities=19% Similarity=0.171 Sum_probs=89.6
Q ss_pred hhHHHHHHhhhcC----CCCCCccEEEEEcCCCCEEEEEeec-CCCCCCCCCCcEEEEeCCCCCCCccHHH-----HHHH
Q 015401 66 CHVETIFAAFFRS----LPDVKLKRECIRTKDDGSVALDWIS-GDHQLLPPDSPVLILMPGLTGGSEDSYV-----RHML 135 (407)
Q Consensus 66 ~~~qt~~~~~~~~----~~~~~~~r~~~~~~dg~~~~~~~~~-~~~~~~~~~~p~vv~lHG~~g~~~~~~~-----~~~~ 135 (407)
..+|..|....+. ...-..+|..++. |+-.+.--... ++ ..+...||++-|.++.-...++ ..+.
T Consensus 90 ~~l~~~~~~~~~~~~~~~~~~~~kRv~Iq~-D~~~IDt~~I~~~~----a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~ 164 (365)
T PF05677_consen 90 KILQEAYLAQIDNWFSDDEVSSVKRVPIQY-DGVKIDTMAIHQPE----AKPQRWILVSNGNGECYENRAMLDYKDDWIQ 164 (365)
T ss_pred HHHHHHHHHHhhhhhccccccceeeEEEee-CCEEEEEEEeeCCC----CCCCcEEEEEcCChHHhhhhhhhccccHHHH
Confidence 3466766655432 2233456777777 66444322222 22 2367889999997543332111 2233
Q ss_pred HHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhC---CCCcEEEEEechhHHHHHHHHhccCC
Q 015401 136 LRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKY---PKAHLYAVGWSLGANILIRYLGHESH 209 (407)
Q Consensus 136 ~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~---~~~~v~lvG~S~Gg~ia~~~a~~~p~ 209 (407)
......|-+|+++|+||.|.|.+.. +.++++.|..+++++++.+. ....+++.|||+||.++..++.++..
T Consensus 165 ~~ak~~~aNvl~fNYpGVg~S~G~~---s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~~ 238 (365)
T PF05677_consen 165 RFAKELGANVLVFNYPGVGSSTGPP---SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEVL 238 (365)
T ss_pred HHHHHcCCcEEEECCCccccCCCCC---CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhccc
Confidence 3445578999999999999997654 34788999999999998643 23589999999999999887766543
No 135
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.84 E-value=2.7e-09 Score=96.45 Aligned_cols=115 Identities=16% Similarity=0.214 Sum_probs=70.8
Q ss_pred CCCCCcEEEEeCCCCCCC-ccHHHHHHHHHHHhC---CcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhh--
Q 015401 109 LPPDSPVLILMPGLTGGS-EDSYVRHMLLRARSK---GWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSK-- 182 (407)
Q Consensus 109 ~~~~~p~vv~lHG~~g~~-~~~~~~~~~~~l~~~---g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~-- 182 (407)
....+|++|++|||.++. .+.|+..+...++.+ ++.||++|+.......-.............+..+|+.|...
T Consensus 67 fn~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~g 146 (331)
T PF00151_consen 67 FNPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINNFG 146 (331)
T ss_dssp --TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred cCCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhhcC
Confidence 455899999999999988 667888888877665 89999999964322100000001122244556666666532
Q ss_pred CCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCC
Q 015401 183 YPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (407)
Q Consensus 183 ~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~ 223 (407)
.+..++++||||+||.+|..++........|..+..++|..
T Consensus 147 ~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAg 187 (331)
T PF00151_consen 147 VPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAG 187 (331)
T ss_dssp --GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-
T ss_pred CChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccc
Confidence 34569999999999999998887766611288999988743
No 136
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.83 E-value=1.4e-07 Score=102.74 Aligned_cols=100 Identities=12% Similarity=0.101 Sum_probs=73.9
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEE
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAV 191 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lv 191 (407)
++++++++||++|+.. .| ..+...+ ..+++|++++.+|+|.+. ....+.+.+++++.+.++.+. +..+++++
T Consensus 1067 ~~~~l~~lh~~~g~~~-~~-~~l~~~l-~~~~~v~~~~~~g~~~~~--~~~~~l~~la~~~~~~i~~~~---~~~p~~l~ 1138 (1296)
T PRK10252 1067 DGPTLFCFHPASGFAW-QF-SVLSRYL-DPQWSIYGIQSPRPDGPM--QTATSLDEVCEAHLATLLEQQ---PHGPYHLL 1138 (1296)
T ss_pred CCCCeEEecCCCCchH-HH-HHHHHhc-CCCCcEEEEECCCCCCCC--CCCCCHHHHHHHHHHHHHhhC---CCCCEEEE
Confidence 4578999999987653 44 5555544 668999999999998653 233556666777766666543 33489999
Q ss_pred EechhHHHHHHHHhc---cCCCCCceeEEEEcC
Q 015401 192 GWSLGANILIRYLGH---ESHSCPLSGAVSLCN 221 (407)
Q Consensus 192 G~S~Gg~ia~~~a~~---~p~~~~v~~~v~l~~ 221 (407)
||||||.++..+|.+ .+++ +..++++++
T Consensus 1139 G~S~Gg~vA~e~A~~l~~~~~~--v~~l~l~~~ 1169 (1296)
T PRK10252 1139 GYSLGGTLAQGIAARLRARGEE--VAFLGLLDT 1169 (1296)
T ss_pred EechhhHHHHHHHHHHHHcCCc--eeEEEEecC
Confidence 999999999999986 4555 888888765
No 137
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.82 E-value=2e-09 Score=90.78 Aligned_cols=90 Identities=17% Similarity=0.245 Sum_probs=56.9
Q ss_pred cEEEEeCCCCCCCccHHHHHHHHHHHhCCcE---EEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEE
Q 015401 114 PVLILMPGLTGGSEDSYVRHMLLRARSKGWR---VVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYA 190 (407)
Q Consensus 114 p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~---vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~l 190 (407)
.+|||+||..++....| ..+...|.++||. ++++++-....+..........+.+.+++++|+.+...-+. +|.+
T Consensus 2 ~PVVlVHG~~~~~~~~w-~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDI 79 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNW-STLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDI 79 (219)
T ss_dssp --EEEE--TTTTTCGGC-CHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEE
T ss_pred CCEEEECCCCcchhhCH-HHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEE
Confidence 46999999987666555 6788889999999 79999854433221110111223357899999999877666 9999
Q ss_pred EEechhHHHHHHHHh
Q 015401 191 VGWSLGANILIRYLG 205 (407)
Q Consensus 191 vG~S~Gg~ia~~~a~ 205 (407)
|||||||.++-.|..
T Consensus 80 VgHS~G~~iaR~yi~ 94 (219)
T PF01674_consen 80 VGHSMGGTIARYYIK 94 (219)
T ss_dssp EEETCHHHHHHHHHH
T ss_pred EEcCCcCHHHHHHHH
Confidence 999999999887764
No 138
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.81 E-value=4.5e-09 Score=97.10 Aligned_cols=106 Identities=18% Similarity=0.257 Sum_probs=60.6
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCC-CCC--CCC----------------cccCC----
Q 015401 111 PDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDS-PVT--TPQ----------------FYSAS---- 167 (407)
Q Consensus 111 ~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S-~~~--~~~----------------~~~~~---- 167 (407)
+.-|+|||-||++|+.. .| ..++..|+++||-|+++|+|..-.. ... ... .....
T Consensus 98 ~~~PvvIFSHGlgg~R~-~y-S~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRT-SY-SAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPE 175 (379)
T ss_dssp S-EEEEEEE--TT--TT-TT-HHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GG
T ss_pred CCCCEEEEeCCCCcchh-hH-HHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccch
Confidence 36799999999987654 55 6788899999999999999953211 000 000 00000
Q ss_pred ------------ChhHHHHHHHHHHhh------------------C----CCCcEEEEEechhHHHHHHHHhccCCCCCc
Q 015401 168 ------------FLGDMQEVVAHVGSK------------------Y----PKAHLYAVGWSLGANILIRYLGHESHSCPL 213 (407)
Q Consensus 168 ------------~~~Dl~~~l~~l~~~------------------~----~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v 213 (407)
-++|+..+++.+..- + ...++.++|||+||..++..+.+.. + +
T Consensus 176 ~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d~-r--~ 252 (379)
T PF03403_consen 176 EEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQDT-R--F 252 (379)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH-T-T---
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhcc-C--c
Confidence 134666666666420 0 0237999999999999998887774 4 9
Q ss_pred eeEEEEcC
Q 015401 214 SGAVSLCN 221 (407)
Q Consensus 214 ~~~v~l~~ 221 (407)
+++|++++
T Consensus 253 ~~~I~LD~ 260 (379)
T PF03403_consen 253 KAGILLDP 260 (379)
T ss_dssp -EEEEES-
T ss_pred ceEEEeCC
Confidence 99999875
No 139
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.80 E-value=3.5e-07 Score=75.17 Aligned_cols=66 Identities=20% Similarity=0.299 Sum_probs=53.0
Q ss_pred cCCCccceeeeecCCCCCCCCCCCChhHHhcCCCeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHHHHHhc
Q 015401 307 IKHVRIPLLCIQAQNDPIAPSRGIPCEDIKANPNCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEHLERAS 382 (407)
Q Consensus 307 l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~~~~~~ 382 (407)
...|++|.|-|.|+.|.+++.+.+ ..+....++..++.-+ |||+..-..+ +.+.|.+|++......
T Consensus 159 ~~~i~~PSLHi~G~~D~iv~~~~s-~~L~~~~~~a~vl~Hp-ggH~VP~~~~--------~~~~i~~fi~~~~~~~ 224 (230)
T KOG2551|consen 159 KRPLSTPSLHIFGETDTIVPSERS-EQLAESFKDATVLEHP-GGHIVPNKAK--------YKEKIADFIQSFLQEE 224 (230)
T ss_pred ccCCCCCeeEEecccceeecchHH-HHHHHhcCCCeEEecC-CCccCCCchH--------HHHHHHHHHHHHHHhh
Confidence 457799999999999999998876 6788888888666665 9997665553 7789999999876544
No 140
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.79 E-value=1.6e-08 Score=94.71 Aligned_cols=95 Identities=12% Similarity=0.143 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccC
Q 015401 129 SYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHES 208 (407)
Q Consensus 129 ~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p 208 (407)
.|+..++..|.+.||.+ ..|++|+|.+..... ....+.+++.++++.+....+..+++++||||||.++..++..+|
T Consensus 108 ~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~--~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p 184 (440)
T PLN02733 108 YYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSN--RLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHS 184 (440)
T ss_pred HHHHHHHHHHHHcCCcc-CCCcccCCCCccccc--cHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCC
Confidence 56688899999999866 889999999864321 234557889999999888878889999999999999999998887
Q ss_pred CC--CCceeEEEEcCCCCHH
Q 015401 209 HS--CPLSGAVSLCNPFNLV 226 (407)
Q Consensus 209 ~~--~~v~~~v~l~~p~~~~ 226 (407)
+. ..|+.+|.+++|+.-.
T Consensus 185 ~~~~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 185 DVFEKYVNSWIAIAAPFQGA 204 (440)
T ss_pred HhHHhHhccEEEECCCCCCC
Confidence 63 2389999999998643
No 141
>PRK04940 hypothetical protein; Provisional
Probab=98.73 E-value=4.7e-07 Score=73.22 Aligned_cols=34 Identities=15% Similarity=-0.034 Sum_probs=28.0
Q ss_pred CcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCC
Q 015401 186 AHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (407)
Q Consensus 186 ~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~ 224 (407)
.++.+||.|+||+.|..++.++. + .+|+++|.+.
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g----~-~aVLiNPAv~ 93 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG----I-RQVIFNPNLF 93 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC----C-CEEEECCCCC
Confidence 37999999999999999999987 3 4566777654
No 142
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.65 E-value=3.9e-07 Score=78.26 Aligned_cols=124 Identities=18% Similarity=0.255 Sum_probs=83.7
Q ss_pred CCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHHHHHHH--HH-HHhCCcEEEEEeC-------CCCCCCCCCCCCc
Q 015401 94 DGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHML--LR-ARSKGWRVVVFNS-------RGCGDSPVTTPQF 163 (407)
Q Consensus 94 g~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~~~--~~-l~~~g~~vi~~D~-------rG~G~S~~~~~~~ 163 (407)
|....+.++.|.. .+.+.|.||++||-.++.. .+ .... .. ....||-|+.+|- .+++.+..+.+..
T Consensus 44 g~~r~y~l~vP~g--~~~~apLvv~LHG~~~sga-g~-~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~ 119 (312)
T COG3509 44 GLKRSYRLYVPPG--LPSGAPLVVVLHGSGGSGA-GQ-LHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRR 119 (312)
T ss_pred CCccceEEEcCCC--CCCCCCEEEEEecCCCChH-Hh-hcccchhhhhcccCcEEECcCccccccCCCcccccCCccccc
Confidence 3344555444442 4556799999999766553 32 2221 22 3356999999842 2233332222222
Q ss_pred ccCCChhHHHHHHHHHHhhCCC--CcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCC
Q 015401 164 YSASFLGDMQEVVAHVGSKYPK--AHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (407)
Q Consensus 164 ~~~~~~~Dl~~~l~~l~~~~~~--~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~ 223 (407)
...+-+.+++++++.+..++.- .+|++.|.|-||.++..++.++|+. +.++..+++..
T Consensus 120 ~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~--faa~A~VAg~~ 179 (312)
T COG3509 120 RGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDI--FAAIAPVAGLL 179 (312)
T ss_pred CCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCccc--ccceeeeeccc
Confidence 3345577889999999988864 4999999999999999999999998 88888887654
No 143
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.63 E-value=6.7e-07 Score=74.80 Aligned_cols=110 Identities=21% Similarity=0.261 Sum_probs=80.3
Q ss_pred CcEEEEeCCCCCCCccHHHHHHHHHHHhCC-----cEEEEEeCCCC----CCCCC--CCC---------CcccCCChhHH
Q 015401 113 SPVLILMPGLTGGSEDSYVRHMLLRARSKG-----WRVVVFNSRGC----GDSPV--TTP---------QFYSASFLGDM 172 (407)
Q Consensus 113 ~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g-----~~vi~~D~rG~----G~S~~--~~~---------~~~~~~~~~Dl 172 (407)
.-+.||+||.+|...+ +..++.++...+ --++.+|--|. |.-+. ..| ..+...+...+
T Consensus 45 ~iPTIfIhGsgG~asS--~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wl 122 (288)
T COG4814 45 AIPTIFIHGSGGTASS--LNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWL 122 (288)
T ss_pred ccceEEEecCCCChhH--HHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHH
Confidence 3468999999887653 577888876654 23566666662 11010 011 12234557789
Q ss_pred HHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCC---CCceeEEEEcCCCC
Q 015401 173 QEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHS---CPLSGAVSLCNPFN 224 (407)
Q Consensus 173 ~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~---~~v~~~v~l~~p~~ 224 (407)
..++.+|+.+|.-.++.+|||||||.-...|+..+... .++...|.+++|+.
T Consensus 123 k~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 123 KKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 99999999999999999999999999999999888654 35899999999885
No 144
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.62 E-value=1.3e-06 Score=71.41 Aligned_cols=109 Identities=17% Similarity=0.189 Sum_probs=81.1
Q ss_pred CCcEEEEeCCCCCCC-ccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEE
Q 015401 112 DSPVLILMPGLTGGS-EDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYA 190 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~-~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~l 190 (407)
.+-.|||+-|++.+- ...|...+...+.+.+|..+-+-++.+- ......+..+.++|+..+++++....-...|++
T Consensus 35 ~~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy---~G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL 111 (299)
T KOG4840|consen 35 ESVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSY---NGYGTFSLKDDVEDLKCLLEHIQLCGFSTDVVL 111 (299)
T ss_pred eEEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccc---cccccccccccHHHHHHHHHHhhccCcccceEE
Confidence 456799999986544 2357788889999999999999887431 112224466778999999999887644459999
Q ss_pred EEechhHHHHHHHHhc--cCCCCCceeEEEEcCCCCH
Q 015401 191 VGWSLGANILIRYLGH--ESHSCPLSGAVSLCNPFNL 225 (407)
Q Consensus 191 vG~S~Gg~ia~~~a~~--~p~~~~v~~~v~l~~p~~~ 225 (407)
+|||.|+.-.+.|+.+ .+.. |.++|+.++..|.
T Consensus 112 ~GhSTGcQdi~yYlTnt~~~r~--iraaIlqApVSDr 146 (299)
T KOG4840|consen 112 VGHSTGCQDIMYYLTNTTKDRK--IRAAILQAPVSDR 146 (299)
T ss_pred EecCccchHHHHHHHhccchHH--HHHHHHhCccchh
Confidence 9999999999999833 2333 8888887776553
No 145
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.60 E-value=1.5e-06 Score=72.38 Aligned_cols=111 Identities=18% Similarity=0.284 Sum_probs=77.5
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHHhC---CcEEEEEeCCCCCCCCC---CCCCcc---cCCChhHHHHHHHHHHh
Q 015401 111 PDSPVLILMPGLTGGSEDSYVRHMLLRARSK---GWRVVVFNSRGCGDSPV---TTPQFY---SASFLGDMQEVVAHVGS 181 (407)
Q Consensus 111 ~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~---g~~vi~~D~rG~G~S~~---~~~~~~---~~~~~~Dl~~~l~~l~~ 181 (407)
.+++.++++.|.+|.. .|...++..+... .+.++.+-..||..-+. ...... .-.+.+.+..-++.++.
T Consensus 27 ~~~~li~~IpGNPG~~--gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~ 104 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLL--GFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKE 104 (301)
T ss_pred CCceEEEEecCCCCch--hHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHH
Confidence 3789999999999866 4446777666443 25699999999876541 111111 12345666677777776
Q ss_pred hCC-CCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCC
Q 015401 182 KYP-KAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (407)
Q Consensus 182 ~~~-~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~ 223 (407)
..| +.+++++|||.|+++.+..+-.......|..++++-|..
T Consensus 105 ~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTI 147 (301)
T KOG3975|consen 105 YVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTI 147 (301)
T ss_pred hCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchH
Confidence 655 569999999999999999987655444588888876643
No 146
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.60 E-value=8.3e-08 Score=81.93 Aligned_cols=166 Identities=17% Similarity=0.179 Sum_probs=77.3
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHH---HHhC-CcEEEEEeCCCCC-----CCCC----------CCCCc---------
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLR---ARSK-GWRVVVFNSRGCG-----DSPV----------TTPQF--------- 163 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~---l~~~-g~~vi~~D~rG~G-----~S~~----------~~~~~--------- 163 (407)
.++-||++||++.+.. .+ ...... .+.. ++..+.+|-|--- -... ..+.+
T Consensus 3 ~k~riLcLHG~~~na~-if-~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 80 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAE-IF-RQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDD 80 (212)
T ss_dssp ---EEEEE--TT--HH-HH-HHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-S
T ss_pred CCceEEEeCCCCcCHH-HH-HHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCc
Confidence 5788999999865442 33 333222 2344 8999988876322 1100 00100
Q ss_pred -ccCCChhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccC------CCCCceeEEEEcCCCCHHHHHHHHhcch
Q 015401 164 -YSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHES------HSCPLSGAVSLCNPFNLVIADQDFRKGF 236 (407)
Q Consensus 164 -~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p------~~~~v~~~v~l~~p~~~~~~~~~~~~~~ 236 (407)
....+.+.+..+.+.+....| =..++|+|.||.+|..++.... ...+++-+|++++......
T Consensus 81 ~~~~~~~~sl~~l~~~i~~~GP--fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~--------- 149 (212)
T PF03959_consen 81 HEYEGLDESLDYLRDYIEENGP--FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDP--------- 149 (212)
T ss_dssp GGG---HHHHHHHHHHHHHH-----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE---------
T ss_pred ccccCHHHHHHHHHHHHHhcCC--eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCch---------
Confidence 112233444455555555532 3579999999999998885432 1123788888876431000
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHhcCCCHHHHhhccccccCCCCCHHHHHhhCCcchhcCCCccceee
Q 015401 237 NIVYDKALASALCRIFKKHALLFEDMGGEFNIPLAANAKSVRQFDDGLTRVSFGFKSVDDYYSNSSSSDSIKHVRIPLLC 316 (407)
Q Consensus 237 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvli 316 (407)
. +.. . ..-..|++|+|.
T Consensus 150 ---------------------------------~---------~~~--------------~-------~~~~~i~iPtlH 166 (212)
T PF03959_consen 150 ---------------------------------D---------YQE--------------L-------YDEPKISIPTLH 166 (212)
T ss_dssp -------------------------------------------GTT--------------T-------T--TT---EEEE
T ss_pred ---------------------------------h---------hhh--------------h-------hccccCCCCeEE
Confidence 0 000 0 023467899999
Q ss_pred eecCCCCCCCCCCCChhHHhcCCC-eEEEEcCCCCceeec
Q 015401 317 IQAQNDPIAPSRGIPCEDIKANPN-CLLILTPKGGHLGWV 355 (407)
Q Consensus 317 i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~ 355 (407)
|+|++|.+++++.. +.+.+...+ .+++..+ +||....
T Consensus 167 v~G~~D~~~~~~~s-~~L~~~~~~~~~v~~h~-gGH~vP~ 204 (212)
T PF03959_consen 167 VIGENDPVVPPERS-EALAEMFDPDARVIEHD-GGHHVPR 204 (212)
T ss_dssp EEETT-SSS-HHHH-HHHHHHHHHHEEEEEES-SSSS---
T ss_pred EEeCCCCCcchHHH-HHHHHhccCCcEEEEEC-CCCcCcC
Confidence 99999999997654 455555555 7777775 8886543
No 147
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.59 E-value=1.4e-08 Score=86.50 Aligned_cols=51 Identities=16% Similarity=0.200 Sum_probs=40.7
Q ss_pred hHHHHHHHHHHhhCC--CCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCC
Q 015401 170 GDMQEVVAHVGSKYP--KAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (407)
Q Consensus 170 ~Dl~~~l~~l~~~~~--~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~ 223 (407)
+-+..++++|+.+-. ..+|.++|.|.||-+|+.+|..+|+ |+++|.++++.
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~~---i~avVa~~ps~ 56 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFPQ---ISAVVAISPSS 56 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSSS---EEEEEEES--S
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCCC---ccEEEEeCCce
Confidence 345678888887622 2589999999999999999999995 99999998754
No 148
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.56 E-value=6.4e-07 Score=77.28 Aligned_cols=112 Identities=14% Similarity=0.177 Sum_probs=72.5
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCc--EEEEEeCCCCCCCCC-CCCCcccCCChhHHHHHHHHHHhhCCCCcE
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGW--RVVVFNSRGCGDSPV-TTPQFYSASFLGDMQEVVAHVGSKYPKAHL 188 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~--~vi~~D~rG~G~S~~-~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v 188 (407)
.+.++||+||+..+..+. ....+......+| .++++.+|+.|.-.. ............++..+++.|....+..+|
T Consensus 17 ~~~vlvfVHGyn~~f~~a-~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I 95 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDA-LRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKRI 95 (233)
T ss_pred CCeEEEEEeCCCCCHHHH-HHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCceE
Confidence 688999999996544322 2333322223333 799999998875311 111111122356778888888877677899
Q ss_pred EEEEechhHHHHHHHHhccCCC-------CCceeEEEEcCCCC
Q 015401 189 YAVGWSLGANILIRYLGHESHS-------CPLSGAVSLCNPFN 224 (407)
Q Consensus 189 ~lvG~S~Gg~ia~~~a~~~p~~-------~~v~~~v~l~~p~~ 224 (407)
++++||||+.+.+..+...... ..|..++++++-.+
T Consensus 96 ~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid 138 (233)
T PF05990_consen 96 HILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDID 138 (233)
T ss_pred EEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCC
Confidence 9999999999998876542211 13788888887655
No 149
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.54 E-value=1.7e-06 Score=82.09 Aligned_cols=138 Identities=17% Similarity=0.211 Sum_probs=97.6
Q ss_pred cEEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCC---CC
Q 015401 85 KRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVT---TP 161 (407)
Q Consensus 85 ~r~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~---~~ 161 (407)
+|...+..||..+.+..+...+...++++|.++..-|.-|.+....+....-.|+.+||--...--||=|.-... ..
T Consensus 420 ~riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~G 499 (682)
T COG1770 420 RRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDG 499 (682)
T ss_pred EEEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhh
Confidence 344455578887766644333234566899999999988877666656555568899988888888987754321 11
Q ss_pred -CcccCCChhHHHHHHHHHHhh-CC-CCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCC
Q 015401 162 -QFYSASFLGDMQEVVAHVGSK-YP-KAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (407)
Q Consensus 162 -~~~~~~~~~Dl~~~l~~l~~~-~~-~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~ 224 (407)
...-..-..|..++.++|... +. ...++++|-|.||+++...+.+.|+. +.++|+-.|-.|
T Consensus 500 K~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~l--f~~iiA~VPFVD 563 (682)
T COG1770 500 KLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDL--FAGIIAQVPFVD 563 (682)
T ss_pred hhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhh--hhheeecCCccc
Confidence 112223357888888888765 22 34899999999999999999999998 888887665444
No 150
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.53 E-value=1.8e-06 Score=74.41 Aligned_cols=106 Identities=16% Similarity=0.202 Sum_probs=68.5
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCC------CCCCCcccCC-----------------
Q 015401 111 PDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSP------VTTPQFYSAS----------------- 167 (407)
Q Consensus 111 ~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~------~~~~~~~~~~----------------- 167 (407)
+.-|+|||-||++|+ +..| ..+...+++.||-|.+++.|-+..+- ........+.
T Consensus 116 ~k~PvvvFSHGLggs-Rt~Y-Sa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~ir 193 (399)
T KOG3847|consen 116 DKYPVVVFSHGLGGS-RTLY-SAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIR 193 (399)
T ss_pred CCccEEEEecccccc-hhhH-HHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEee
Confidence 366999999999764 4355 77788899999999999999764331 1000000000
Q ss_pred ---C---hhHHHHHHHHHHhh-----------------------CCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEE
Q 015401 168 ---F---LGDMQEVVAHVGSK-----------------------YPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVS 218 (407)
Q Consensus 168 ---~---~~Dl~~~l~~l~~~-----------------------~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~ 218 (407)
. +.....+++-+..- ....++.++|||+||..++...+.+.+ ++++|+
T Consensus 194 Neqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t~---FrcaI~ 270 (399)
T KOG3847|consen 194 NEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHTD---FRCAIA 270 (399)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccccc---eeeeee
Confidence 0 22233333322210 112478999999999999988887766 899998
Q ss_pred EcC
Q 015401 219 LCN 221 (407)
Q Consensus 219 l~~ 221 (407)
+++
T Consensus 271 lD~ 273 (399)
T KOG3847|consen 271 LDA 273 (399)
T ss_pred eee
Confidence 764
No 151
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.47 E-value=1.5e-06 Score=81.87 Aligned_cols=139 Identities=17% Similarity=0.194 Sum_probs=97.8
Q ss_pred ccEEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCC---CC
Q 015401 84 LKRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPV---TT 160 (407)
Q Consensus 84 ~~r~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~---~~ 160 (407)
..|..+...||..+.+..+........+++|.+|..+|..|-+-..++..-..-|++.|+-....|.||-|.-.. ..
T Consensus 441 ~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~ 520 (712)
T KOG2237|consen 441 VERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKD 520 (712)
T ss_pred EEEEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhc
Confidence 456677888998887765544333345588999999997665544443333334667999999999999775431 11
Q ss_pred CCc-ccCCChhHHHHHHHHHHhhC--CCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCC
Q 015401 161 PQF-YSASFLGDMQEVVAHVGSKY--PKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (407)
Q Consensus 161 ~~~-~~~~~~~Dl~~~l~~l~~~~--~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~ 224 (407)
... .-....+|..+.+++|.... ...+..+.|.|.||.++..++.++|+. +.++|+-.+-.|
T Consensus 521 G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdL--F~avia~VpfmD 585 (712)
T KOG2237|consen 521 GRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDL--FGAVIAKVPFMD 585 (712)
T ss_pred cchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchH--hhhhhhcCccee
Confidence 221 12345789999999987652 245899999999999999999999998 777776555444
No 152
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.45 E-value=5.1e-07 Score=84.21 Aligned_cols=191 Identities=15% Similarity=0.170 Sum_probs=114.6
Q ss_pred CCcEEEEeCCCC-CCCccHHHHHHHHHHHh--CCcEEEEEeCCC-CCCCCCCCCCcccCCChh----HHHHHHHHHHhhC
Q 015401 112 DSPVLILMPGLT-GGSEDSYVRHMLLRARS--KGWRVVVFNSRG-CGDSPVTTPQFYSASFLG----DMQEVVAHVGSKY 183 (407)
Q Consensus 112 ~~p~vv~lHG~~-g~~~~~~~~~~~~~l~~--~g~~vi~~D~rG-~G~S~~~~~~~~~~~~~~----Dl~~~l~~l~~~~ 183 (407)
..|.+|++||.. ....+.+++.+...+.. +-..|..+|++. +|+ ..+...++ -.+..+..+...+
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG-------~nI~h~ae~~vSf~r~kvlei~gef 247 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGG-------ANIKHAAEYSVSFDRYKVLEITGEF 247 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCC-------cchHHHHHHHHHHhhhhhhhhhccC
Confidence 568999999976 22222333444444433 335567778763 332 11222222 2233333445567
Q ss_pred CCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhhhcC
Q 015401 184 PKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNIVYDKALASALCRIFKKHALLFEDMG 263 (407)
Q Consensus 184 ~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 263 (407)
+..+|+|+|+|||+.++.+....+.+.. |+++|+++-|.+-..
T Consensus 248 pha~IiLvGrsmGAlVachVSpsnsdv~-V~~vVCigypl~~vd------------------------------------ 290 (784)
T KOG3253|consen 248 PHAPIILVGRSMGALVACHVSPSNSDVE-VDAVVCIGYPLDTVD------------------------------------ 290 (784)
T ss_pred CCCceEEEecccCceeeEEeccccCCce-EEEEEEecccccCCC------------------------------------
Confidence 8889999999999888888776665432 888888875543110
Q ss_pred CCCCHHHHhcCCCHHHHhhccccccCCCCCHHHHHhhCCcchhcCCCccceeeeecCCCCCCCCCCCChhHHhcCCCeEE
Q 015401 264 GEFNIPLAANAKSVRQFDDGLTRVSFGFKSVDDYYSNSSSSDSIKHVRIPLLCIQAQNDPIAPSRGIPCEDIKANPNCLL 343 (407)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~ 343 (407)
..+ ....+.+-.++.|+|++.|..|..++++.......+.....++
T Consensus 291 ---------gpr-------------------------girDE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~el 336 (784)
T KOG3253|consen 291 ---------GPR-------------------------GIRDEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVEL 336 (784)
T ss_pred ---------ccc-------------------------CCcchhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhccceE
Confidence 000 0012455667899999999999999988763222233456789
Q ss_pred EEcCCCCceeecCCCC-CCCCCCC--cHHHHHHHHHHHHH
Q 015401 344 ILTPKGGHLGWVAGPE-APFGSPW--TDPVVMDFLEHLER 380 (407)
Q Consensus 344 ~~~~~~gH~~~~~~p~-~~~~~~w--~~~~i~~fl~~~~~ 380 (407)
+++.+++|..-.-... +..+.+| +...+.++|.++..
T Consensus 337 hVI~~adhsmaipk~k~esegltqseVd~~i~~aI~efvt 376 (784)
T KOG3253|consen 337 HVIGGADHSMAIPKRKVESEGLTQSEVDSAIAQAIKEFVT 376 (784)
T ss_pred EEecCCCccccCCccccccccccHHHHHHHHHHHHHHHHH
Confidence 9999999975554421 1123444 45555666665543
No 153
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.42 E-value=1.4e-06 Score=75.37 Aligned_cols=103 Identities=18% Similarity=0.164 Sum_probs=73.1
Q ss_pred cEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEEEe
Q 015401 114 PVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGW 193 (407)
Q Consensus 114 p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~ 193 (407)
|+|.++|+..|... .| ..+...+ .....|+.++.||.+.-.. . ...+-+-+...++.++..-|..+++++||
T Consensus 1 ~pLF~fhp~~G~~~-~~-~~L~~~l-~~~~~v~~l~a~g~~~~~~--~---~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~ 72 (257)
T COG3319 1 PPLFCFHPAGGSVL-AY-APLAAAL-GPLLPVYGLQAPGYGAGEQ--P---FASLDDMAAAYVAAIRRVQPEGPYVLLGW 72 (257)
T ss_pred CCEEEEcCCCCcHH-HH-HHHHHHh-ccCceeeccccCccccccc--c---cCCHHHHHHHHHHHHHHhCCCCCEEEEee
Confidence 57999999877554 33 5565555 4459999999999985321 1 22223344566667776667789999999
Q ss_pred chhHHHHHHHHhccCCC-CCceeEEEEcCCCC
Q 015401 194 SLGANILIRYLGHESHS-CPLSGAVSLCNPFN 224 (407)
Q Consensus 194 S~Gg~ia~~~a~~~p~~-~~v~~~v~l~~p~~ 224 (407)
|+||.+|..+|.+--.. ..|.-++++.++..
T Consensus 73 S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 73 SLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred ccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 99999999998764322 12899999988765
No 154
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.33 E-value=2.7e-05 Score=68.01 Aligned_cols=222 Identities=14% Similarity=0.182 Sum_probs=115.5
Q ss_pred EEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCC--CcEEEEE
Q 015401 115 VLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPK--AHLYAVG 192 (407)
Q Consensus 115 ~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~--~~v~lvG 192 (407)
++|++=||.|... ..+........+.|+.++.+-.+-..... +. .....-+..+++.+...-.. .++++-.
T Consensus 1 plvvl~gW~gA~~-~hl~KY~~~Y~~~g~~il~~~~~~~~~~~---~~---~~~~~~~~~l~~~l~~~~~~~~~~il~H~ 73 (240)
T PF05705_consen 1 PLVVLLGWMGAKP-KHLAKYSDLYQDPGFDILLVTSPPADFFW---PS---KRLAPAADKLLELLSDSQSASPPPILFHS 73 (240)
T ss_pred CEEEEEeCCCCCH-HHHHHHHHHHHhcCCeEEEEeCCHHHHee---ec---cchHHHHHHHHHHhhhhccCCCCCEEEEE
Confidence 3677778876554 55566666667799999998765322111 00 23334444555555543222 2899999
Q ss_pred echhHHHHHHHHhc-----c--CCCC-CceeEEEEcCCCCHHH--HHHHHhcchhHHHHH--HHHHHHHHHHHHHHhhhh
Q 015401 193 WSLGANILIRYLGH-----E--SHSC-PLSGAVSLCNPFNLVI--ADQDFRKGFNIVYDK--ALASALCRIFKKHALLFE 260 (407)
Q Consensus 193 ~S~Gg~ia~~~a~~-----~--p~~~-~v~~~v~l~~p~~~~~--~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~ 260 (407)
+|.||...+..... . .... .+++.|+-++|..... ....+...+...... .....+............
T Consensus 74 FSnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (240)
T PF05705_consen 74 FSNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSSSARAFSAALPKSSPRWFVPLWPLLQFLLRLSIISY 153 (240)
T ss_pred EECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccccHHHHHHHHcCccchhhHHHHHHHHHHHHHHHHHHH
Confidence 99988877655431 1 1112 2888888887753222 111111111111000 000000000000000000
Q ss_pred hcCCCCCHHHHhcCCCHHHHhhccccccCCCCCHHHHHhhCCcchhcCCCccceeeeecCCCCCCCCCCCCh---hHHhc
Q 015401 261 DMGGEFNIPLAANAKSVRQFDDGLTRVSFGFKSVDDYYSNSSSSDSIKHVRIPLLCIQAQNDPIAPSRGIPC---EDIKA 337 (407)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~---~~~~~ 337 (407)
.. .+......++............++|-|+|.++.|.+++.+.+.+ +..+.
T Consensus 154 ~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~ 207 (240)
T PF05705_consen 154 FI--------------------------FGYPDVQEYYRRALNDFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRK 207 (240)
T ss_pred HH--------------------------hcCCcHHHHHHHHHhhhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHc
Confidence 00 00111111111111112233446899999999999999986632 22334
Q ss_pred CCCeEEEEcCCCCceeecC-CCCCCCCCCCcHHHHHHHH
Q 015401 338 NPNCLLILTPKGGHLGWVA-GPEAPFGSPWTDPVVMDFL 375 (407)
Q Consensus 338 ~~~~~~~~~~~~gH~~~~~-~p~~~~~~~w~~~~i~~fl 375 (407)
.-.+....++++.|+.++. +|++ +.+.+.+|+
T Consensus 208 G~~V~~~~f~~S~HV~H~r~~p~~------Y~~~v~~fw 240 (240)
T PF05705_consen 208 GWDVRAEKFEDSPHVAHLRKHPDR------YWRAVDEFW 240 (240)
T ss_pred CCeEEEecCCCCchhhhcccCHHH------HHHHHHhhC
Confidence 4568888999999998865 4444 667777764
No 155
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.32 E-value=3.6e-06 Score=70.74 Aligned_cols=242 Identities=14% Similarity=0.214 Sum_probs=123.1
Q ss_pred EEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHHHHH--HHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHH-
Q 015401 96 SVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRH--MLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDM- 172 (407)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~--~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl- 172 (407)
+..+.|..+.. .++..|.+-|-+.+ .|.+. +...+.+++...+++.-+-+|.......-...-.++.|+
T Consensus 101 ~A~~~~liPQK-----~~~KOG~~a~tgdh---~y~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~~~~Le~vtDlf 172 (371)
T KOG1551|consen 101 TARVAWLIPQK-----MADLCLSWALTGDH---VYTRRLVLSKPINKREIATMVLEKPFYGQRVPEEQIIHMLEYVTDLF 172 (371)
T ss_pred ceeeeeecccC-----cCCeeEEEeecCCc---eeEeeeeecCchhhhcchheeeecccccccCCHHHHHHHHHHHHHHH
Confidence 44556665542 45666666664332 33333 456678899999999999998764221111111222333
Q ss_pred ---HHHHHHHHhh------CCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchhHHHHHH
Q 015401 173 ---QEVVAHVGSK------YPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNIVYDKA 243 (407)
Q Consensus 173 ---~~~l~~l~~~------~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~~~~~~ 243 (407)
++.|+..... .+..++.++|-||||.+|......++.. |.-+=++++.-. ...+..+.- ..
T Consensus 173 ~mG~A~I~E~~~lf~Ws~~~g~g~~~~~g~Smgg~~a~~vgS~~q~P--va~~p~l~~~~a----svs~teg~l---~~- 242 (371)
T KOG1551|consen 173 KMGRATIQEFVKLFTWSSADGLGNLNLVGRSMGGDIANQVGSLHQKP--VATAPCLNSSKA----SVSATEGLL---LQ- 242 (371)
T ss_pred HhhHHHHHHHHHhcccccccCcccceeeeeecccHHHHhhcccCCCC--cccccccccccc----chhhhhhhh---hh-
Confidence 2223333222 2345899999999999999988877765 554444433211 111111110 00
Q ss_pred HHHHHHHHHHH--HHhhhhhcCCC-CCHHHHhcC----CCHHHHhhccccccCCCCCHHHHHhhCCcchhcCCCccc---
Q 015401 244 LASALCRIFKK--HALLFEDMGGE-FNIPLAANA----KSVRQFDDGLTRVSFGFKSVDDYYSNSSSSDSIKHVRIP--- 313 (407)
Q Consensus 244 ~~~~l~~~~~~--~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P--- 313 (407)
....+++.... ........+.. +........ .....+.+.+ . +....+.+..+|
T Consensus 243 ~~s~~~~~~~~t~~~~~~~r~p~Q~~~~~~~~~srn~~~E~~~~Mr~v-------------m---d~~T~v~~fp~Pvdp 306 (371)
T KOG1551|consen 243 DTSKMKRFNQTTNKSGYTSRNPAQSYHLLSKEQSRNSRKESLIFMRGV-------------M---DECTHVANFPVPVDP 306 (371)
T ss_pred hhHHHHhhccCcchhhhhhhCchhhHHHHHHHhhhcchHHHHHHHHHH-------------H---HhhchhhcCCCCCCC
Confidence 01111111100 00000000000 000000000 0000010000 0 000112222333
Q ss_pred --eeeeecCCCCCCCCCCCChhHHhcCCCeEEEEcCCCCcee-ecCCCCCCCCCCCcHHHHHHHHHHHH
Q 015401 314 --LLCIQAQNDPIAPSRGIPCEDIKANPNCLLILTPKGGHLG-WVAGPEAPFGSPWTDPVVMDFLEHLE 379 (407)
Q Consensus 314 --vlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~-~~~~p~~~~~~~w~~~~i~~fl~~~~ 379 (407)
+.++.+++|..+|...+ ..+.+..|++++..++ +||.. ++.+-+. +-+.|.+-|++..
T Consensus 307 sl~ivv~A~~D~Yipr~gv-~~lQ~~WPg~eVr~~e-gGHVsayl~k~dl------fRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 307 SLIIVVQAKEDAYIPRTGV-RSLQEIWPGCEVRYLE-GGHVSAYLFKQDL------FRRAIVDGLDRLD 367 (371)
T ss_pred CeEEEEEecCCccccccCc-HHHHHhCCCCEEEEee-cCceeeeehhchH------HHHHHHHHHHhhh
Confidence 46778999999998777 6889999999999998 99984 4555554 7788888887765
No 156
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.31 E-value=2.1e-06 Score=75.70 Aligned_cols=112 Identities=15% Similarity=0.222 Sum_probs=66.2
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHHhCC----cEEEEEeCCCCCCC--CCCCC-----CcccC----CChhHH-HH
Q 015401 111 PDSPVLILMPGLTGGSEDSYVRHMLLRARSKG----WRVVVFNSRGCGDS--PVTTP-----QFYSA----SFLGDM-QE 174 (407)
Q Consensus 111 ~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g----~~vi~~D~rG~G~S--~~~~~-----~~~~~----~~~~Dl-~~ 174 (407)
..-|+|+++||..+.....-....+..+...+ .-+++++.-+.+.. ....+ ..... .+.+.+ .+
T Consensus 22 ~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~e 101 (251)
T PF00756_consen 22 KPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADDSGGGDAYETFLTEE 101 (251)
T ss_dssp TTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTSTTTHHHHHHHHHTH
T ss_pred CCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccccCCCCcccceehhcc
Confidence 46799999999711111111122233333333 44666676555411 11100 01111 112222 36
Q ss_pred HHHHHHhhCCCC--cEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCC
Q 015401 175 VVAHVGSKYPKA--HLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (407)
Q Consensus 175 ~l~~l~~~~~~~--~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~ 224 (407)
++..+..+++.. +..++|+||||..|+.++.++|+. +.+++++++.++
T Consensus 102 l~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~--F~~~~~~S~~~~ 151 (251)
T PF00756_consen 102 LIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDL--FGAVIAFSGALD 151 (251)
T ss_dssp HHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTT--ESEEEEESEESE
T ss_pred chhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccc--cccccccCcccc
Confidence 667777777632 279999999999999999999999 999999997643
No 157
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.25 E-value=7.5e-05 Score=67.34 Aligned_cols=111 Identities=14% Similarity=0.243 Sum_probs=74.0
Q ss_pred CCCcEEEEeCCCCCCCc-cHHHHHHHHHHHhCCcEEEEEeCCCC--CCCCCC-----------CCCccc-----------
Q 015401 111 PDSPVLILMPGLTGGSE-DSYVRHMLLRARSKGWRVVVFNSRGC--GDSPVT-----------TPQFYS----------- 165 (407)
Q Consensus 111 ~~~p~vv~lHG~~g~~~-~~~~~~~~~~l~~~g~~vi~~D~rG~--G~S~~~-----------~~~~~~----------- 165 (407)
.....||++||.+.+.. ...+..+...|-+.||.++++.++.- ...+.. ......
T Consensus 85 ~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 164 (310)
T PF12048_consen 85 KPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQ 164 (310)
T ss_pred CCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCcccccc
Confidence 36789999999876663 24566777778899999999999871 111100 000000
Q ss_pred ---------CCChhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCC
Q 015401 166 ---------ASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (407)
Q Consensus 166 ---------~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~ 223 (407)
..+..-+.++++.+.. ++..+++|+||+.|+..++.|+.+.+... ++++|+|++-+
T Consensus 165 ~~~~~~~~~~~~~ari~Aa~~~~~~-~~~~~ivlIg~G~gA~~~~~~la~~~~~~-~daLV~I~a~~ 229 (310)
T PF12048_consen 165 EAEAREAYEERLFARIEAAIAFAQQ-QGGKNIVLIGHGTGAGWAARYLAEKPPPM-PDALVLINAYW 229 (310)
T ss_pred HhHHhHHHHHHHHHHHHHHHHHHHh-cCCceEEEEEeChhHHHHHHHHhcCCCcc-cCeEEEEeCCC
Confidence 1112233444444444 35556999999999999999999887532 78999998754
No 158
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.21 E-value=1e-05 Score=66.22 Aligned_cols=179 Identities=12% Similarity=0.118 Sum_probs=101.5
Q ss_pred CcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCC-------CC--CcccC--CC-------hhHHHH
Q 015401 113 SPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVT-------TP--QFYSA--SF-------LGDMQE 174 (407)
Q Consensus 113 ~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~-------~~--~~~~~--~~-------~~Dl~~ 174 (407)
..+||++||++.+.. .| ..++..+.-++..-|++.-|-.-.+... .+ .+... .. ++-+..
T Consensus 3 ~atIi~LHglGDsg~-~~-~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~ 80 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGS-GW-AQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIAN 80 (206)
T ss_pred eEEEEEEecCCCCCc-cH-HHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHH
Confidence 468999999876554 44 4444555556666777754432111100 00 01100 01 122223
Q ss_pred HHHHHHhh-CCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHHhcchhHHHHHHHHHHHHHHHH
Q 015401 175 VVAHVGSK-YPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDFRKGFNIVYDKALASALCRIFK 253 (407)
Q Consensus 175 ~l~~l~~~-~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 253 (407)
+++..-.. -+..+|.+-|+|+||.+++..+..++.. +.+.+.+++-...
T Consensus 81 Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~--l~G~~~~s~~~p~---------------------------- 130 (206)
T KOG2112|consen 81 LIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKA--LGGIFALSGFLPR---------------------------- 130 (206)
T ss_pred HHHHHHHcCCCccceeEcccCchHHHHHHHHhccccc--cceeecccccccc----------------------------
Confidence 33322222 2345789999999999999999999776 6666655432110
Q ss_pred HHHhhhhhcCCCCCHHHHhcCCCHHHHhhccccccCCCCCHHHHHhhCCcchhcCCCccceeeeecCCCCCCCCCCC---
Q 015401 254 KHALLFEDMGGEFNIPLAANAKSVRQFDDGLTRVSFGFKSVDDYYSNSSSSDSIKHVRIPLLCIQAQNDPIAPSRGI--- 330 (407)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~--- 330 (407)
....+.. +. ...+ .+|.+..||+.|++||..-.
T Consensus 131 ----------------------~~~~~~~--------~~------------~~~~--~~~i~~~Hg~~d~~vp~~~g~~s 166 (206)
T KOG2112|consen 131 ----------------------ASIGLPG--------WL------------PGVN--YTPILLCHGTADPLVPFRFGEKS 166 (206)
T ss_pred ----------------------chhhccC--------Cc------------cccC--cchhheecccCCceeehHHHHHH
Confidence 0000000 00 0001 57999999999999997632
Q ss_pred ChhHHhcCCCeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHH
Q 015401 331 PCEDIKANPNCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEH 377 (407)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~ 377 (407)
.+.+......+++..+++-+|...-+ + .+.+..|+.+
T Consensus 167 ~~~l~~~~~~~~f~~y~g~~h~~~~~---e-------~~~~~~~~~~ 203 (206)
T KOG2112|consen 167 AQFLKSLGVRVTFKPYPGLGHSTSPQ---E-------LDDLKSWIKT 203 (206)
T ss_pred HHHHHHcCCceeeeecCCccccccHH---H-------HHHHHHHHHH
Confidence 23444555559999999999964332 2 2557777766
No 159
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.20 E-value=5e-05 Score=64.58 Aligned_cols=82 Identities=12% Similarity=-0.020 Sum_probs=54.1
Q ss_pred HHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhcc---C
Q 015401 132 RHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHE---S 208 (407)
Q Consensus 132 ~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~---p 208 (407)
..+...+ ..++.|+++|.+|++.+.... ... .+.+...++.+....+..+++++|||+||.++...+.+. +
T Consensus 16 ~~~~~~l-~~~~~v~~~~~~g~~~~~~~~--~~~---~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~ 89 (212)
T smart00824 16 ARLAAAL-RGRRDVSALPLPGFGPGEPLP--ASA---DALVEAQAEAVLRAAGGRPFVLVGHSSGGLLAHAVAARLEARG 89 (212)
T ss_pred HHHHHhc-CCCccEEEecCCCCCCCCCCC--CCH---HHHHHHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHHHHHhCC
Confidence 4444444 557899999999998664321 111 222233444444444566899999999999998888763 3
Q ss_pred CCCCceeEEEEcC
Q 015401 209 HSCPLSGAVSLCN 221 (407)
Q Consensus 209 ~~~~v~~~v~l~~ 221 (407)
.. +.+++++..
T Consensus 90 ~~--~~~l~~~~~ 100 (212)
T smart00824 90 IP--PAAVVLLDT 100 (212)
T ss_pred CC--CcEEEEEcc
Confidence 44 788877765
No 160
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.17 E-value=9.9e-06 Score=77.36 Aligned_cols=126 Identities=21% Similarity=0.344 Sum_probs=75.6
Q ss_pred CCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHHHH-HHHHHH-HhCCcEEEEEeCCCCCCCCCCCCC--------c
Q 015401 94 DGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVR-HMLLRA-RSKGWRVVVFNSRGCGDSPVTTPQ--------F 163 (407)
Q Consensus 94 g~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~-~~~~~l-~~~g~~vi~~D~rG~G~S~~~~~~--------~ 163 (407)
.++...+|....+ -..+++|++|++-|= +.....+.. .+...+ .+-|=.++++.+|-+|.|.. .+. +
T Consensus 11 ~~tf~qRY~~n~~-~~~~~gpifl~~ggE-~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P-~~~~s~~nL~yL 87 (434)
T PF05577_consen 11 NGTFSQRYWVNDQ-YYKPGGPIFLYIGGE-GPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQP-FGDLSTENLRYL 87 (434)
T ss_dssp T-EEEEEEEEE-T-T--TTSEEEEEE--S-S-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-T-TGGGGGSTTTC-
T ss_pred CCeEEEEEEEEhh-hcCCCCCEEEEECCC-CccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCC-ccccchhhHHhc
Confidence 4455555443321 122357777777663 333222221 122233 33477899999999999953 222 2
Q ss_pred ccCCChhHHHHHHHHHHhhC---CCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCC
Q 015401 164 YSASFLGDMQEVVAHVGSKY---PKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (407)
Q Consensus 164 ~~~~~~~Dl~~~l~~l~~~~---~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~ 224 (407)
+.+...+|+..++++++.++ ++.|++++|-|+||++|..+-.++|+. |.|++.-++|..
T Consensus 88 t~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~--~~ga~ASSapv~ 149 (434)
T PF05577_consen 88 TSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHL--FDGAWASSAPVQ 149 (434)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT---SEEEEET--CC
T ss_pred CHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCe--eEEEEeccceee
Confidence 33455789999999999765 456999999999999999999999999 999999998873
No 161
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.14 E-value=3e-05 Score=72.72 Aligned_cols=108 Identities=19% Similarity=0.200 Sum_probs=66.5
Q ss_pred CCCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCc----EEEEEeCCCCCCCCCCCCCcc-cCCChhHH-HHHHHHHHhhC
Q 015401 110 PPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGW----RVVVFNSRGCGDSPVTTPQFY-SASFLGDM-QEVVAHVGSKY 183 (407)
Q Consensus 110 ~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~----~vi~~D~rG~G~S~~~~~~~~-~~~~~~Dl-~~~l~~l~~~~ 183 (407)
+...|+|+++||-.-.. .......+..+.+.|. -++.+|..+.. .. ...+. ...+.+.+ .+++-++..+|
T Consensus 206 ~~~~PvlyllDG~~w~~-~~~~~~~ld~li~~g~i~P~ivV~id~~~~~--~R-~~el~~~~~f~~~l~~eLlP~I~~~y 281 (411)
T PRK10439 206 PEERPLAILLDGQFWAE-SMPVWPALDSLTHRGQLPPAVYLLIDAIDTT--HR-SQELPCNADFWLAVQQELLPQVRAIA 281 (411)
T ss_pred CCCCCEEEEEECHHhhh-cCCHHHHHHHHHHcCCCCceEEEEECCCCcc--cc-cccCCchHHHHHHHHHHHHHHHHHhC
Confidence 34679999999943211 1113445556666663 35667653211 11 11111 12233333 45555566555
Q ss_pred C----CCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCC
Q 015401 184 P----KAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (407)
Q Consensus 184 ~----~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~ 223 (407)
+ ..+.+++|+||||..++.++.++|+. +.+++.+++.+
T Consensus 282 ~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~--Fg~v~s~Sgs~ 323 (411)
T PRK10439 282 PFSDDADRTVVAGQSFGGLAALYAGLHWPER--FGCVLSQSGSF 323 (411)
T ss_pred CCCCCccceEEEEEChHHHHHHHHHHhCccc--ccEEEEeccce
Confidence 4 24789999999999999999999999 99999998753
No 162
>PLN02606 palmitoyl-protein thioesterase
Probab=98.14 E-value=7.9e-05 Score=65.33 Aligned_cols=104 Identities=15% Similarity=0.149 Sum_probs=66.0
Q ss_pred CcEEEEeCCCCCCCccHHHHHHHHHHHh-CCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhh--CCCCcEE
Q 015401 113 SPVLILMPGLTGGSEDSYVRHMLLRARS-KGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSK--YPKAHLY 189 (407)
Q Consensus 113 ~p~vv~lHG~~g~~~~~~~~~~~~~l~~-~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~--~~~~~v~ 189 (407)
..+||+.||++.+....-+..+...+.. .|+.+.++- .|-+. ..-......+.+..+.+.++.. .. .-+.
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~-----~~s~~~~~~~Qv~~vce~l~~~~~L~-~G~n 98 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGV-----QDSLFMPLRQQASIACEKIKQMKELS-EGYN 98 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCc-----ccccccCHHHHHHHHHHHHhcchhhc-CceE
Confidence 4569999999733322224555555532 366655554 23221 1112234455666666666542 12 2699
Q ss_pred EEEechhHHHHHHHHhccCCCCCceeEEEEcCCC
Q 015401 190 AVGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (407)
Q Consensus 190 lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~ 223 (407)
++|+|-||.++-.++.+.|+..+|+.+|.+++|-
T Consensus 99 aIGfSQGglflRa~ierc~~~p~V~nlISlggph 132 (306)
T PLN02606 99 IVAESQGNLVARGLIEFCDNAPPVINYVSLGGPH 132 (306)
T ss_pred EEEEcchhHHHHHHHHHCCCCCCcceEEEecCCc
Confidence 9999999999999999987733599999999875
No 163
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.10 E-value=9.1e-06 Score=69.55 Aligned_cols=91 Identities=18% Similarity=0.152 Sum_probs=43.4
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHh--CCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCC--Cc
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARS--KGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPK--AH 187 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~--~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~--~~ 187 (407)
..-.||++||+.|+..+ + ..+...+.. ..+.-..+...++......+ ...++...+.+.+-|.......+. .+
T Consensus 3 ~~hLvV~vHGL~G~~~d-~-~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~T-~~gI~~~g~rL~~eI~~~~~~~~~~~~~ 79 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPAD-M-RYLKNHLEKIPEDLPNARIVVLGYSNNEFKT-FDGIDVCGERLAEEILEHIKDYESKIRK 79 (217)
T ss_pred CCEEEEEeCCCCCCHHH-H-HHHHHHHHHhhhhcchhhhhhhccccccccc-chhhHHHHHHHHHHHHHhcccccccccc
Confidence 45689999999987643 2 333333333 12221122222221111000 011222233332222222222222 48
Q ss_pred EEEEEechhHHHHHHHHh
Q 015401 188 LYAVGWSLGANILIRYLG 205 (407)
Q Consensus 188 v~lvG~S~Gg~ia~~~a~ 205 (407)
+.+|||||||.++-.++.
T Consensus 80 IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 80 ISFIGHSLGGLIARYALG 97 (217)
T ss_pred ceEEEecccHHHHHHHHH
Confidence 999999999999865554
No 164
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.99 E-value=2.2e-05 Score=71.81 Aligned_cols=105 Identities=23% Similarity=0.286 Sum_probs=74.3
Q ss_pred CcEEEEeCCCCCCCccHHHHHHHHHHHhCCcE---EEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEE
Q 015401 113 SPVLILMPGLTGGSEDSYVRHMLLRARSKGWR---VVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLY 189 (407)
Q Consensus 113 ~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~---vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~ 189 (407)
.-+++++||+.++. ..+ ..+...+...|+. ++.+++++-. .........+.+...++.+-...+.+++.
T Consensus 59 ~~pivlVhG~~~~~-~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~~~~~~~ql~~~V~~~l~~~ga~~v~ 130 (336)
T COG1075 59 KEPIVLVHGLGGGY-GNF-LPLDYRLAILGWLTNGVYAFELSGGD------GTYSLAVRGEQLFAYVDEVLAKTGAKKVN 130 (336)
T ss_pred CceEEEEccCcCCc-chh-hhhhhhhcchHHHhcccccccccccC------CCccccccHHHHHHHHHHHHhhcCCCceE
Confidence 45799999984433 333 4555556667777 8888887651 11223344566666666666666667999
Q ss_pred EEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCH
Q 015401 190 AVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNL 225 (407)
Q Consensus 190 lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~ 225 (407)
++||||||.++..++...+....|+.++.+++|-..
T Consensus 131 LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~G 166 (336)
T COG1075 131 LIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHHG 166 (336)
T ss_pred EEeecccchhhHHHHhhcCccceEEEEEEeccCCCC
Confidence 999999999999999988833339999999988643
No 165
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.97 E-value=5.3e-05 Score=67.33 Aligned_cols=113 Identities=15% Similarity=0.204 Sum_probs=73.8
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHHhCC--cEEEEEeCCCCCCCCC-CCCCcccCCChhHHHHHHHHHHhhCCCCc
Q 015401 111 PDSPVLILMPGLTGGSEDSYVRHMLLRARSKG--WRVVVFNSRGCGDSPV-TTPQFYSASFLGDMQEVVAHVGSKYPKAH 187 (407)
Q Consensus 111 ~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g--~~vi~~D~rG~G~S~~-~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~ 187 (407)
..+.++||+||+.-+-.+. ....++-....| ...+++.||..|.--. ..++-+...-..++..++..|..+.+..+
T Consensus 114 ~~k~vlvFvHGfNntf~da-v~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~ 192 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDA-VYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKR 192 (377)
T ss_pred CCCeEEEEEcccCCchhHH-HHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCce
Confidence 4788999999985433322 223333344444 5678999997765311 11122233346788999999999877889
Q ss_pred EEEEEechhHHHHHHHHhccC----C--CCCceeEEEEcCCCC
Q 015401 188 LYAVGWSLGANILIRYLGHES----H--SCPLSGAVSLCNPFN 224 (407)
Q Consensus 188 v~lvG~S~Gg~ia~~~a~~~p----~--~~~v~~~v~l~~p~~ 224 (407)
|++++||||.++++..+.+.- + ...|+-+|+-++-.|
T Consensus 193 I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD 235 (377)
T COG4782 193 IYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDID 235 (377)
T ss_pred EEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCC
Confidence 999999999999988765432 1 122666676665444
No 166
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=97.95 E-value=7e-05 Score=70.64 Aligned_cols=156 Identities=15% Similarity=0.066 Sum_probs=103.8
Q ss_pred hhhHHHHHHhhhc-CCCCCCccEEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCc
Q 015401 65 NCHVETIFAAFFR-SLPDVKLKRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGW 143 (407)
Q Consensus 65 ~~~~qt~~~~~~~-~~~~~~~~r~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~ 143 (407)
.+.++++=....+ +......+...-+..||..|.+..+. .+.... +.|++|+--|...-+....+.......+++|.
T Consensus 374 ~~eLe~ik~~p~~FDa~~~~veQ~~atSkDGT~IPYFiv~-K~~~~d-~~pTll~aYGGF~vsltP~fs~~~~~WLerGg 451 (648)
T COG1505 374 GGELEVIREQPVQFDADNYEVEQFFATSKDGTRIPYFIVR-KGAKKD-ENPTLLYAYGGFNISLTPRFSGSRKLWLERGG 451 (648)
T ss_pred CceehhhhhccCCcCccCceEEEEEEEcCCCccccEEEEe-cCCcCC-CCceEEEeccccccccCCccchhhHHHHhcCC
Confidence 3446666444322 13334455666788899999887664 221122 68888888775444433333444467789999
Q ss_pred EEEEEeCCCCCCCCCC----CCCcccCCChhHHHHHHHHHHhhC--CCCcEEEEEechhHHHHHHHHhccCCCCCceeEE
Q 015401 144 RVVVFNSRGCGDSPVT----TPQFYSASFLGDMQEVVAHVGSKY--PKAHLYAVGWSLGANILIRYLGHESHSCPLSGAV 217 (407)
Q Consensus 144 ~vi~~D~rG~G~S~~~----~~~~~~~~~~~Dl~~~l~~l~~~~--~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v 217 (407)
..+..|.||-|.=... .-...-....+|..++.+.|..+. ...++.+.|-|-||.++...+.++|+. +.++|
T Consensus 452 ~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPel--fgA~v 529 (648)
T COG1505 452 VFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPEL--FGAAV 529 (648)
T ss_pred eEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhh--hCcee
Confidence 9999999998754311 011222445789999999998762 134889999999999999999999997 77766
Q ss_pred EEcCCCC
Q 015401 218 SLCNPFN 224 (407)
Q Consensus 218 ~l~~p~~ 224 (407)
+-.+-.|
T Consensus 530 ~evPllD 536 (648)
T COG1505 530 CEVPLLD 536 (648)
T ss_pred eccchhh
Confidence 6554443
No 167
>KOG3101 consensus Esterase D [General function prediction only]
Probab=97.92 E-value=6.9e-05 Score=61.12 Aligned_cols=111 Identities=23% Similarity=0.382 Sum_probs=63.0
Q ss_pred CCcEEEEeCCCCCCCccHHHHHH--HHHHHhCCcEEEEEeC--CCC---CCCCC----CCCCccc----CCChh------
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHM--LLRARSKGWRVVVFNS--RGC---GDSPV----TTPQFYS----ASFLG------ 170 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~--~~~l~~~g~~vi~~D~--rG~---G~S~~----~~~~~~~----~~~~~------ 170 (407)
.-|+|.++-|+++... +++..- .....+.|+.|+.+|- ||. |.++. ....++. +-|..
T Consensus 43 ~~P~lf~LSGLTCT~~-Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYd 121 (283)
T KOG3101|consen 43 RCPVLFYLSGLTCTHE-NFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYD 121 (283)
T ss_pred cCceEEEecCCcccch-hhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHH
Confidence 3589999999988654 554322 2345678999999985 554 22210 0011221 11111
Q ss_pred -HHHHHHHHHH---hhCCCCcEEEEEechhHHHHHHHHhccCCC-CCceeEEEEcCCC
Q 015401 171 -DMQEVVAHVG---SKYPKAHLYAVGWSLGANILIRYLGHESHS-CPLSGAVSLCNPF 223 (407)
Q Consensus 171 -Dl~~~l~~l~---~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~-~~v~~~v~l~~p~ 223 (407)
-+.++.+.+. ......++.+.||||||.=|+..+.+.+.+ ..|.+..-|++|.
T Consensus 122 Yv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~ 179 (283)
T KOG3101|consen 122 YVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPI 179 (283)
T ss_pred HHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCcc
Confidence 1122222222 111234799999999999999888888876 2244444455554
No 168
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.91 E-value=0.00019 Score=58.56 Aligned_cols=114 Identities=15% Similarity=0.207 Sum_probs=74.8
Q ss_pred CCCCcEEEEeCCCCCCCccHHHHHH--------------HHHHHhCCcEEEEEeCCCCCC--CCCCCCCcccCCChhHHH
Q 015401 110 PPDSPVLILMPGLTGGSEDSYVRHM--------------LLRARSKGWRVVVFNSRGCGD--SPVTTPQFYSASFLGDMQ 173 (407)
Q Consensus 110 ~~~~p~vv~lHG~~g~~~~~~~~~~--------------~~~l~~~g~~vi~~D~rG~G~--S~~~~~~~~~~~~~~Dl~ 173 (407)
..+...+|+|||-+--....|.+.+ +....+.||.|++.+.--+-+ .....+..+...-++.+.
T Consensus 98 t~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~ 177 (297)
T KOG3967|consen 98 TNPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAK 177 (297)
T ss_pred cCccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHH
Confidence 3466789999996433333444433 445667899999998642211 012233444444455555
Q ss_pred HHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCC
Q 015401 174 EVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (407)
Q Consensus 174 ~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~ 223 (407)
.+...+........+++|.||+||...+.+..++|+...|.++.+-.+++
T Consensus 178 yvw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~ 227 (297)
T KOG3967|consen 178 YVWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAM 227 (297)
T ss_pred HHHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccc
Confidence 55555554444558999999999999999999999865577777766654
No 169
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.90 E-value=4.6e-05 Score=74.22 Aligned_cols=124 Identities=17% Similarity=0.102 Sum_probs=72.9
Q ss_pred EEEEEeecCCCCCCCCCCcEEEEeCCCC---CCCccHHHHHHHHHHHh-C-CcEEEEEeCC-CC-CCCCCCCCCcccCCC
Q 015401 96 SVALDWISGDHQLLPPDSPVLILMPGLT---GGSEDSYVRHMLLRARS-K-GWRVVVFNSR-GC-GDSPVTTPQFYSASF 168 (407)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~p~vv~lHG~~---g~~~~~~~~~~~~~l~~-~-g~~vi~~D~r-G~-G~S~~~~~~~~~~~~ 168 (407)
-+.+....+.........|+||++||.+ |+.. .+ ....+.. . ++.|+.+++| |. |.-...........-
T Consensus 78 cl~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~-~~---~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g 153 (493)
T cd00312 78 CLYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGS-LY---PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYG 153 (493)
T ss_pred CCeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCC-CC---ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchh
Confidence 3455544443211124679999999932 2222 11 1122333 3 3999999999 43 211111111111222
Q ss_pred hhHHHHHHHHHHhh---C--CCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCC
Q 015401 169 LGDMQEVVAHVGSK---Y--PKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (407)
Q Consensus 169 ~~Dl~~~l~~l~~~---~--~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~ 223 (407)
..|+..++++++.. + ...+|.++|+|.||..+..++.....+..+.++|++++..
T Consensus 154 ~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~ 213 (493)
T cd00312 154 LKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSA 213 (493)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCc
Confidence 57999999998865 2 2459999999999999988876632222288888887654
No 170
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.80 E-value=0.00033 Score=62.98 Aligned_cols=75 Identities=23% Similarity=0.333 Sum_probs=48.5
Q ss_pred CCcchhcCCCc-cceeeeecCCCCCCCCCCCChhHHhcCC-CeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHHH
Q 015401 301 SSSSDSIKHVR-IPLLCIQAQNDPIAPSRGIPCEDIKANP-NCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEHL 378 (407)
Q Consensus 301 ~~~~~~l~~i~-~Pvlii~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~~ 378 (407)
.+....+..+. +|+|+++|.+|.++|............. ......+++++|......... ..-..+.+.+|+.+.
T Consensus 221 ~d~~~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~---~~~~~~~~~~f~~~~ 297 (299)
T COG1073 221 LDPFDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPA---VEQALDKLAEFLERH 297 (299)
T ss_pred CcchhhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHH---HHHHHHHHHHHHHHh
Confidence 33445555665 7999999999999998766433333333 567778888999866533321 000456677777654
No 171
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.79 E-value=6.5e-05 Score=70.27 Aligned_cols=86 Identities=14% Similarity=0.291 Sum_probs=65.8
Q ss_pred HHHHHHHHHHhCCcEE-----EE-EeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHH
Q 015401 130 YVRHMLLRARSKGWRV-----VV-FNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRY 203 (407)
Q Consensus 130 ~~~~~~~~l~~~g~~v-----i~-~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~ 203 (407)
++..++..|.+.||.. .+ +|+| .+.. ..+.+...+...|+.+.... +++++|+||||||.++..+
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR---~~~~-----~~~~~~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~f 136 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWR---LSPA-----ERDEYFTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARYF 136 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechh---hchh-----hHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHHH
Confidence 5688888898888753 23 6887 2221 23456778888888887765 7799999999999999999
Q ss_pred HhccCCC----CCceeEEEEcCCCC
Q 015401 204 LGHESHS----CPLSGAVSLCNPFN 224 (407)
Q Consensus 204 a~~~p~~----~~v~~~v~l~~p~~ 224 (407)
+...+.. ..|++.|.+++|+.
T Consensus 137 l~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 137 LQWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred HHhccchhhHHhhhhEEEEeCCCCC
Confidence 8887532 34999999999985
No 172
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.75 E-value=0.00015 Score=70.45 Aligned_cols=110 Identities=15% Similarity=0.181 Sum_probs=60.8
Q ss_pred CCCCCCcEEEEeCCCCCCCccHHHHHHHHHHH----------------hCCcEEEEEeCCCCCCCCCCCCCcccCCChhH
Q 015401 108 LLPPDSPVLILMPGLTGGSEDSYVRHMLLRAR----------------SKGWRVVVFNSRGCGDSPVTTPQFYSASFLGD 171 (407)
Q Consensus 108 ~~~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~----------------~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~D 171 (407)
..+.++-+|+|++|..|+-.. ++.++.... ...|+.+++|+-+- .|. -.+-...+.++-
T Consensus 84 ~lelsGIPVLFIPGNAGSyKQ--vRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe-~tA--m~G~~l~dQtEY 158 (973)
T KOG3724|consen 84 TLELSGIPVLFIPGNAGSYKQ--VRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEE-FTA--MHGHILLDQTEY 158 (973)
T ss_pred cccCCCceEEEecCCCCchHH--HHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccch-hhh--hccHhHHHHHHH
Confidence 345577889999998875542 344443332 12356666666320 000 001112223444
Q ss_pred HHHHHHHHHhhC------C---CCcEEEEEechhHHHHHHHHhccCCC--CCceeEEEEcCCC
Q 015401 172 MQEVVAHVGSKY------P---KAHLYAVGWSLGANILIRYLGHESHS--CPLSGAVSLCNPF 223 (407)
Q Consensus 172 l~~~l~~l~~~~------~---~~~v~lvG~S~Gg~ia~~~a~~~p~~--~~v~~~v~l~~p~ 223 (407)
+.++|+.+...| + ...|+++||||||.+|...+.. |+. ..|.-++.+++|.
T Consensus 159 V~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tl-kn~~~~sVntIITlssPH 220 (973)
T KOG3724|consen 159 VNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTL-KNEVQGSVNTIITLSSPH 220 (973)
T ss_pred HHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhh-hhhccchhhhhhhhcCcc
Confidence 445555544333 2 3459999999999999776643 322 1277777777654
No 173
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=97.66 E-value=0.00025 Score=59.38 Aligned_cols=78 Identities=19% Similarity=0.343 Sum_probs=48.3
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEE-EEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEE
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRV-VVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYA 190 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~v-i~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~l 190 (407)
++..||+..||+.+. .-+.++. ...+|.| +++|+|..-- + .| + . ..+.+.|
T Consensus 10 ~~~LilfF~GWg~d~--~~f~hL~---~~~~~D~l~~yDYr~l~~----------d---~~-------~-~--~y~~i~l 61 (213)
T PF04301_consen 10 GKELILFFAGWGMDP--SPFSHLI---LPENYDVLICYDYRDLDF----------D---FD-------L-S--GYREIYL 61 (213)
T ss_pred CCeEEEEEecCCCCh--HHhhhcc---CCCCccEEEEecCccccc----------c---cc-------c-c--cCceEEE
Confidence 457899999996533 2223321 2345654 6678873311 0 01 1 1 2348999
Q ss_pred EEechhHHHHHHHHhccCCCCCceeEEEEcC
Q 015401 191 VGWSLGANILIRYLGHESHSCPLSGAVSLCN 221 (407)
Q Consensus 191 vG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~ 221 (407)
||+|||-.+|..+....+ ++..+.+++
T Consensus 62 vAWSmGVw~A~~~l~~~~----~~~aiAING 88 (213)
T PF04301_consen 62 VAWSMGVWAANRVLQGIP----FKRAIAING 88 (213)
T ss_pred EEEeHHHHHHHHHhccCC----cceeEEEEC
Confidence 999999999988876543 666677765
No 174
>COG3150 Predicted esterase [General function prediction only]
Probab=97.58 E-value=0.00016 Score=56.81 Aligned_cols=88 Identities=14% Similarity=0.069 Sum_probs=52.2
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEEEech
Q 015401 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSL 195 (407)
Q Consensus 116 vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~ 195 (407)
||++||+.++.. +.-..+...+.....+.+.+ +.. .... ...++.+.++.+..+.......++|-|+
T Consensus 2 ilYlHGFnSSP~-shka~l~~q~~~~~~~~i~y-------~~p-~l~h----~p~~a~~ele~~i~~~~~~~p~ivGssL 68 (191)
T COG3150 2 ILYLHGFNSSPG-SHKAVLLLQFIDEDVRDIEY-------STP-HLPH----DPQQALKELEKAVQELGDESPLIVGSSL 68 (191)
T ss_pred eEEEecCCCCcc-cHHHHHHHHHHhccccceee-------ecC-CCCC----CHHHHHHHHHHHHHHcCCCCceEEeecc
Confidence 899999987554 44344444444443333322 211 1111 2344444455554444545799999999
Q ss_pred hHHHHHHHHhccCCCCCceeEEEEcC
Q 015401 196 GANILIRYLGHESHSCPLSGAVSLCN 221 (407)
Q Consensus 196 Gg~ia~~~a~~~p~~~~v~~~v~l~~ 221 (407)
||+.|.+++.++. +++++ ++|
T Consensus 69 GGY~At~l~~~~G----irav~-~NP 89 (191)
T COG3150 69 GGYYATWLGFLCG----IRAVV-FNP 89 (191)
T ss_pred hHHHHHHHHHHhC----Chhhh-cCC
Confidence 9999999998887 44544 444
No 175
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.55 E-value=0.0012 Score=60.27 Aligned_cols=50 Identities=12% Similarity=0.113 Sum_probs=38.1
Q ss_pred hhHHHHHHHHHHhhCC----CCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEc
Q 015401 169 LGDMQEVVAHVGSKYP----KAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLC 220 (407)
Q Consensus 169 ~~Dl~~~l~~l~~~~~----~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~ 220 (407)
+-|+..++.++...++ +-|++++|+|.||++|..+|.-.|.. +++++=-+
T Consensus 163 AiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~--~~~~iDns 216 (403)
T PF11144_consen 163 AIDIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWL--FDGVIDNS 216 (403)
T ss_pred HHHHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccc--eeEEEecC
Confidence 3466666666666654 13899999999999999999999987 77766433
No 176
>PLN02633 palmitoyl protein thioesterase family protein
Probab=97.54 E-value=0.0012 Score=58.15 Aligned_cols=105 Identities=14% Similarity=0.141 Sum_probs=67.4
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHh-CCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhh--CCCCcE
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARS-KGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSK--YPKAHL 188 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~-~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~--~~~~~v 188 (407)
...++|+.||++.+....-+..+...+.. .|..+.++.. |.+. ..-+.....+.+..+.+.++.. .. .-+
T Consensus 24 ~~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~---~~s~~~~~~~Qve~vce~l~~~~~l~-~G~ 96 (314)
T PLN02633 24 VSVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGV---GDSWLMPLTQQAEIACEKVKQMKELS-QGY 96 (314)
T ss_pred CCCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCc---cccceeCHHHHHHHHHHHHhhchhhh-CcE
Confidence 34569999999765543333444443422 3666666654 3331 1222334455556666665542 22 259
Q ss_pred EEEEechhHHHHHHHHhccCCCCCceeEEEEcCCC
Q 015401 189 YAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (407)
Q Consensus 189 ~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~ 223 (407)
+++|||.||.++-.++.+.++..+|+.+|.+++|-
T Consensus 97 naIGfSQGGlflRa~ierc~~~p~V~nlISlggph 131 (314)
T PLN02633 97 NIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPH 131 (314)
T ss_pred EEEEEccchHHHHHHHHHCCCCCCcceEEEecCCC
Confidence 99999999999999999988733499999998875
No 177
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.51 E-value=0.00029 Score=69.46 Aligned_cols=124 Identities=19% Similarity=0.106 Sum_probs=68.9
Q ss_pred EEEEEeecCCCCCCCCCCcEEEEeCCCC---CCCc-cHHHHHHHHHHHhCCcEEEEEeCC----CCCCCCCCCCCcccCC
Q 015401 96 SVALDWISGDHQLLPPDSPVLILMPGLT---GGSE-DSYVRHMLLRARSKGWRVVVFNSR----GCGDSPVTTPQFYSAS 167 (407)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~p~vv~lHG~~---g~~~-~~~~~~~~~~l~~~g~~vi~~D~r----G~G~S~~~~~~~~~~~ 167 (407)
-+.+....|.........|++|+|||.+ |++. ..| .....+..++.-||.+++| |+-.+...... ....
T Consensus 108 CL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~--~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~-~gN~ 184 (535)
T PF00135_consen 108 CLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPY--DGASLAASKDVIVVTINYRLGAFGFLSLGDLDAP-SGNY 184 (535)
T ss_dssp --EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGG--HTHHHHHHHTSEEEEE----HHHHH-BSSSTTSH-BSTH
T ss_pred HHHHhhhhccccccccccceEEEeecccccCCCcccccc--cccccccCCCEEEEEecccccccccccccccccC-chhh
Confidence 4556544443322222579999999932 2221 122 2233456789999999999 33222211111 0111
Q ss_pred ChhHHHHHHHHHHhhC---C--CCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCC
Q 015401 168 FLGDMQEVVAHVGSKY---P--KAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNP 222 (407)
Q Consensus 168 ~~~Dl~~~l~~l~~~~---~--~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p 222 (407)
=..|...++++++... + ..+|.|+|+|.||..+...+..-..+.-+.++|+.++.
T Consensus 185 Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs 244 (535)
T PF00135_consen 185 GLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGS 244 (535)
T ss_dssp HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--
T ss_pred hhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccc
Confidence 1569999999998753 2 34899999999999887766553222339999999873
No 178
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.50 E-value=0.00056 Score=61.77 Aligned_cols=105 Identities=18% Similarity=0.219 Sum_probs=76.1
Q ss_pred cEEEEeCCCCCCCc-----cHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCC----------CcccCCChhHHHHHHHH
Q 015401 114 PVLILMPGLTGGSE-----DSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTP----------QFYSASFLGDMQEVVAH 178 (407)
Q Consensus 114 p~vv~lHG~~g~~~-----~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~----------~~~~~~~~~Dl~~~l~~ 178 (407)
.+|++--|.-|+-. ..+++.++.. .+--+|-.++|-+|.|-.-.. -++.+.-..|...++.+
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~---~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~ 157 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPE---LKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTF 157 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHh---hCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHH
Confidence 56888888766442 1334444443 356788899999999842111 12334556799999999
Q ss_pred HHhhCC--CCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCC
Q 015401 179 VGSKYP--KAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (407)
Q Consensus 179 l~~~~~--~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~ 223 (407)
++.... ..+|+++|-|+||+++..+=.+||.- +.|++.-++|.
T Consensus 158 lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHi--v~GAlAaSAPv 202 (492)
T KOG2183|consen 158 LKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHI--VLGALAASAPV 202 (492)
T ss_pred HhhccccccCcEEEecCchhhHHHHHHHhcChhh--hhhhhhccCce
Confidence 988743 45999999999999999999999998 88888777764
No 179
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=97.48 E-value=0.00053 Score=63.81 Aligned_cols=110 Identities=22% Similarity=0.234 Sum_probs=69.8
Q ss_pred CCcEEEEeCCCC---CCCccHHHHHHHHHHHhCC-cEEEEEeCC-C-CCCCC---CCCCC-cccCCChhHHHHHHHHHHh
Q 015401 112 DSPVLILMPGLT---GGSEDSYVRHMLLRARSKG-WRVVVFNSR-G-CGDSP---VTTPQ-FYSASFLGDMQEVVAHVGS 181 (407)
Q Consensus 112 ~~p~vv~lHG~~---g~~~~~~~~~~~~~l~~~g-~~vi~~D~r-G-~G~S~---~~~~~-~~~~~~~~Dl~~~l~~l~~ 181 (407)
+.|++|+|||.+ |+..+.+.. -..|.++| +-|+.+|+| | .|.-. ....+ ....--..|+..+|+++++
T Consensus 93 ~~PVmV~IHGG~y~~Gs~s~~~yd--gs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~ 170 (491)
T COG2272 93 KLPVMVYIHGGGYIMGSGSEPLYD--GSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVRD 170 (491)
T ss_pred CCcEEEEEeccccccCCCcccccC--hHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHHH
Confidence 579999999922 222222212 23577777 999999998 2 23221 11111 1112336789999999987
Q ss_pred h---CC--CCcEEEEEechhHHHHHHHHhccCCC-CCceeEEEEcCCCC
Q 015401 182 K---YP--KAHLYAVGWSLGANILIRYLGHESHS-CPLSGAVSLCNPFN 224 (407)
Q Consensus 182 ~---~~--~~~v~lvG~S~Gg~ia~~~a~~~p~~-~~v~~~v~l~~p~~ 224 (407)
+ ++ ..+|.|+|+|.||+.++.+++- |.. .-+..+|+.|++..
T Consensus 171 NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 171 NIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCCC
Confidence 5 32 3589999999999998887754 442 12677777777654
No 180
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.44 E-value=0.0025 Score=58.09 Aligned_cols=111 Identities=15% Similarity=0.141 Sum_probs=69.1
Q ss_pred CCCCcEEEEeCCCCCCCcc---HHHHHH--HHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCC
Q 015401 110 PPDSPVLILMPGLTGGSED---SYVRHM--LLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYP 184 (407)
Q Consensus 110 ~~~~p~vv~lHG~~g~~~~---~~~~~~--~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~ 184 (407)
+.+.|+||++||.+ -.-. ..+..+ +..++. ...++++|+.-... . ...........++.+..++|....+
T Consensus 119 pk~DpVlIYlHGGG-Y~l~~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~~-~--~~~~~yPtQL~qlv~~Y~~Lv~~~G 193 (374)
T PF10340_consen 119 PKSDPVLIYLHGGG-YFLGTTPSQIEFLLNIYKLLP-EVSILVLDYSLTSS-D--EHGHKYPTQLRQLVATYDYLVESEG 193 (374)
T ss_pred CCCCcEEEEEcCCe-eEecCCHHHHHHHHHHHHHcC-CCeEEEEecccccc-c--cCCCcCchHHHHHHHHHHHHHhccC
Confidence 34579999999942 2211 111111 112333 56999999975430 0 1122334556788888888886667
Q ss_pred CCcEEEEEechhHHHHHHHHhccCC--C-CCceeEEEEcCCCCH
Q 015401 185 KAHLYAVGWSLGANILIRYLGHESH--S-CPLSGAVSLCNPFNL 225 (407)
Q Consensus 185 ~~~v~lvG~S~Gg~ia~~~a~~~p~--~-~~v~~~v~l~~p~~~ 225 (407)
.++|+|+|-|.||++++.++..... . ..=+++|+++|-..+
T Consensus 194 ~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l 237 (374)
T PF10340_consen 194 NKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNL 237 (374)
T ss_pred CCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCC
Confidence 7899999999999999988754322 1 113678888765444
No 181
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.43 E-value=0.00039 Score=56.05 Aligned_cols=55 Identities=15% Similarity=0.079 Sum_probs=41.9
Q ss_pred hhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCC--CCceeEEEEcCCC
Q 015401 169 LGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHS--CPLSGAVSLCNPF 223 (407)
Q Consensus 169 ~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~--~~v~~~v~l~~p~ 223 (407)
...+...++.....+|..+++++|||+||.+|..++...... ..+..++.+++|-
T Consensus 11 ~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 11 ANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 455666666666667888999999999999999988877552 1267788888764
No 182
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.40 E-value=0.00018 Score=53.41 Aligned_cols=60 Identities=25% Similarity=0.421 Sum_probs=50.1
Q ss_pred ccceeeeecCCCCCCCCCCCChhHHhcCCCeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHH
Q 015401 311 RIPLLCIQAQNDPIAPSRGIPCEDIKANPNCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEH 377 (407)
Q Consensus 311 ~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~ 377 (407)
..|+|+|.++.|+++|.+.. +.+.+..++.+++..++.||..+.....- +.+.+.+||..
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a-~~~~~~l~~s~lvt~~g~gHg~~~~~s~C------~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGA-RAMAARLPGSRLVTVDGAGHGVYAGGSPC------VDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHH-HHHHHHCCCceEEEEeccCcceecCCChH------HHHHHHHHHHc
Confidence 58999999999999999876 68888999999999999999988532222 67888888864
No 183
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.36 E-value=0.0027 Score=58.06 Aligned_cols=75 Identities=13% Similarity=0.073 Sum_probs=56.0
Q ss_pred hhCCcchhcCCCccceeeeecCCCCCCCCCCCChhHHhcCCCeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHHH
Q 015401 299 SNSSSSDSIKHVRIPLLCIQAQNDPIAPSRGIPCEDIKANPNCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEHL 378 (407)
Q Consensus 299 ~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~~ 378 (407)
...|+..+..++++|.++|.|..|.+..++.......+......+..+|+++|..-. .. +.+.+..|+...
T Consensus 250 ~ivDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~---~~------~~~~l~~f~~~~ 320 (367)
T PF10142_consen 250 QIVDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG---SD------VVQSLRAFYNRI 320 (367)
T ss_pred HhcCHHHHHHhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch---HH------HHHHHHHHHHHH
Confidence 344555666777999999999999999988774444444446788899999997554 22 778899999887
Q ss_pred HHhc
Q 015401 379 ERAS 382 (407)
Q Consensus 379 ~~~~ 382 (407)
....
T Consensus 321 ~~~~ 324 (367)
T PF10142_consen 321 QNGR 324 (367)
T ss_pred HcCC
Confidence 6544
No 184
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.31 E-value=0.0032 Score=53.74 Aligned_cols=103 Identities=15% Similarity=0.154 Sum_probs=67.0
Q ss_pred cEEEEeCCCCCCCccHHHHHHHHHHHh-CCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhC-CCCcEEEE
Q 015401 114 PVLILMPGLTGGSEDSYVRHMLLRARS-KGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKY-PKAHLYAV 191 (407)
Q Consensus 114 p~vv~lHG~~g~~~~~~~~~~~~~l~~-~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~-~~~~v~lv 191 (407)
-++|++||++.+..+.-+..+.+.+.+ .|..|+++|. |-| ....+.....+.+..+.+.++..- -.+-++++
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g-----~~~s~l~pl~~Qv~~~ce~v~~m~~lsqGyniv 97 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDG-----IKDSSLMPLWEQVDVACEKVKQMPELSQGYNIV 97 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCC-----cchhhhccHHHHHHHHHHHHhcchhccCceEEE
Confidence 569999999776653223444443333 5888899886 333 111223334455555555555321 12368999
Q ss_pred EechhHHHHHHHHhccCCCCCceeEEEEcCCC
Q 015401 192 GWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (407)
Q Consensus 192 G~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~ 223 (407)
|.|.||.++-.++...++ .+|+..|.+++|-
T Consensus 98 g~SQGglv~Raliq~cd~-ppV~n~ISL~gPh 128 (296)
T KOG2541|consen 98 GYSQGGLVARALIQFCDN-PPVKNFISLGGPH 128 (296)
T ss_pred EEccccHHHHHHHHhCCC-CCcceeEeccCCc
Confidence 999999999888877766 5699999999875
No 185
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.31 E-value=0.0086 Score=48.92 Aligned_cols=110 Identities=19% Similarity=0.204 Sum_probs=68.0
Q ss_pred CCcEEEEeCCCCCCCccHH---HH---HHHHH----H--HhCCcEEEEEeCCCCCCCCCCCCCc----ccCCChhHHHHH
Q 015401 112 DSPVLILMPGLTGGSEDSY---VR---HMLLR----A--RSKGWRVVVFNSRGCGDSPVTTPQF----YSASFLGDMQEV 175 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~---~~---~~~~~----l--~~~g~~vi~~D~rG~G~S~~~~~~~----~~~~~~~Dl~~~ 175 (407)
..-+.++++|...+..... .. .+... . ...+=.|-++-+.||-.-....... +-..-+.+|..+
T Consensus 18 A~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~~A~~ga~~L~~f 97 (177)
T PF06259_consen 18 ADHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPGYARAGAPRLARF 97 (177)
T ss_pred cCeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCchHHHHHHHHHHHH
Confidence 5568999999765443211 11 11111 1 1123356666666653210111111 112335688899
Q ss_pred HHHHHhhC-CCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCC
Q 015401 176 VAHVGSKY-PKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (407)
Q Consensus 176 l~~l~~~~-~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~ 223 (407)
++-|+... +..++.++|||+|+.++-..+...+.. ++.+|++++|-
T Consensus 98 ~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~--vddvv~~GSPG 144 (177)
T PF06259_consen 98 LDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLR--VDDVVLVGSPG 144 (177)
T ss_pred HHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCC--cccEEEECCCC
Confidence 99998876 677999999999999998888775555 99999998764
No 186
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.17 E-value=0.0028 Score=53.91 Aligned_cols=98 Identities=16% Similarity=0.227 Sum_probs=62.4
Q ss_pred CCcEEEEeCCC-CCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChh----HHHHHHHHHHhhCC--
Q 015401 112 DSPVLILMPGL-TGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLG----DMQEVVAHVGSKYP-- 184 (407)
Q Consensus 112 ~~p~vv~lHG~-~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~----Dl~~~l~~l~~~~~-- 184 (407)
+..+|-|+-|. .|..-.-.++.+.+.|.++||.|++.-+.- .+.....++ ....+++.+.....
T Consensus 16 P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~---------tfDH~~~A~~~~~~f~~~~~~L~~~~~~~ 86 (250)
T PF07082_consen 16 PKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV---------TFDHQAIAREVWERFERCLRALQKRGGLD 86 (250)
T ss_pred CCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC---------CCcHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 56677788772 233333445888999999999999987741 122222232 33344444544321
Q ss_pred --CCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEc
Q 015401 185 --KAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLC 220 (407)
Q Consensus 185 --~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~ 220 (407)
.-+++-+|||+|+-+-+.+...++.. -++-++++
T Consensus 87 ~~~lP~~~vGHSlGcklhlLi~s~~~~~--r~gniliS 122 (250)
T PF07082_consen 87 PAYLPVYGVGHSLGCKLHLLIGSLFDVE--RAGNILIS 122 (250)
T ss_pred cccCCeeeeecccchHHHHHHhhhccCc--ccceEEEe
Confidence 23789999999999988887776554 45666665
No 187
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.09 E-value=0.00072 Score=58.94 Aligned_cols=107 Identities=16% Similarity=0.291 Sum_probs=51.6
Q ss_pred CCcEEEEeCCCCCCCc---c-HHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCC--C
Q 015401 112 DSPVLILMPGLTGGSE---D-SYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYP--K 185 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~---~-~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~--~ 185 (407)
...+||+.||++.+.. + .-+..++... -.|-.|.+++. |-+.++. ...-.+....+.+..+.+.+... | .
T Consensus 4 ~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~-~PG~yV~si~i-g~~~~~D-~~~s~f~~v~~Qv~~vc~~l~~~-p~L~ 79 (279)
T PF02089_consen 4 SPLPVVIWHGMGDSCCNPSSMGSIKELIEEQ-HPGTYVHSIEI-GNDPSED-VENSFFGNVNDQVEQVCEQLAND-PELA 79 (279)
T ss_dssp SS--EEEE--TT--S--TTTHHHHHHHHHHH-STT--EEE--S-SSSHHHH-HHHHHHSHHHHHHHHHHHHHHH--GGGT
T ss_pred CCCcEEEEEcCccccCChhHHHHHHHHHHHh-CCCceEEEEEE-CCCcchh-hhhhHHHHHHHHHHHHHHHHhhC-hhhh
Confidence 4567999999975431 1 1122333322 35777777776 2221110 00111122233344444444432 1 1
Q ss_pred CcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCC
Q 015401 186 AHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (407)
Q Consensus 186 ~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~ 223 (407)
.-++++|+|-||.++-.++.+.++. +|..+|.+++|-
T Consensus 80 ~G~~~IGfSQGgl~lRa~vq~c~~~-~V~nlISlggph 116 (279)
T PF02089_consen 80 NGFNAIGFSQGGLFLRAYVQRCNDP-PVHNLISLGGPH 116 (279)
T ss_dssp T-EEEEEETCHHHHHHHHHHH-TSS--EEEEEEES--T
T ss_pred cceeeeeeccccHHHHHHHHHCCCC-CceeEEEecCcc
Confidence 3699999999999999999998753 399999999874
No 188
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=97.09 E-value=0.04 Score=47.80 Aligned_cols=255 Identities=15% Similarity=0.232 Sum_probs=133.1
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEE
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAV 191 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lv 191 (407)
..|.|+++-.+.|+.. ...+.-+..++. ...|+..|+-.--.-+.....+..+++++-+.++++.++. .++++
T Consensus 102 pdPkvLivapmsGH~a-TLLR~TV~alLp-~~~vyitDW~dAr~Vp~~~G~FdldDYIdyvie~~~~~Gp-----~~hv~ 174 (415)
T COG4553 102 PDPKVLIVAPMSGHYA-TLLRGTVEALLP-YHDVYITDWVDARMVPLEAGHFDLDDYIDYVIEMINFLGP-----DAHVM 174 (415)
T ss_pred CCCeEEEEecccccHH-HHHHHHHHHhcc-ccceeEeeccccceeecccCCccHHHHHHHHHHHHHHhCC-----CCcEE
Confidence 4578888888877543 455666666654 4689999987655555555567777777777777777775 35666
Q ss_pred EechhH-----HHHHHHHhccCCCCCceeEEEEcCCCCHHHHHHHH-----hcchhHH-------------------HHH
Q 015401 192 GWSLGA-----NILIRYLGHESHSCPLSGAVSLCNPFNLVIADQDF-----RKGFNIV-------------------YDK 242 (407)
Q Consensus 192 G~S~Gg-----~ia~~~a~~~p~~~~v~~~v~l~~p~~~~~~~~~~-----~~~~~~~-------------------~~~ 242 (407)
+.+.-+ .++++.+...|.. -..++++++|.|........ .+.+.++ |..
T Consensus 175 aVCQP~vPvLAAisLM~~~~~p~~--PssMtlmGgPIDaR~nPTavN~lA~~k~~~WF~~n~vm~vP~~ypg~gR~VYPG 252 (415)
T COG4553 175 AVCQPTVPVLAAISLMEEDGDPNV--PSSMTLMGGPIDARKNPTAVNELATEKSIEWFRDNVVMQVPPPYPGFGRRVYPG 252 (415)
T ss_pred EEecCCchHHHHHHHHHhcCCCCC--CceeeeecCccccccCcHHHhHhhhccchHHHHhCeeeecCCCCCCcccccccc
Confidence 655443 3344444445544 57888888888643322211 1111111 111
Q ss_pred ------HHHHHHHHHHHHHHhhhhhcCCCCCHHHHhcCCCHHHHh-hcccccc----CCCCCHHHHHhhCC-----cchh
Q 015401 243 ------ALASALCRIFKKHALLFEDMGGEFNIPLAANAKSVRQFD-DGLTRVS----FGFKSVDDYYSNSS-----SSDS 306 (407)
Q Consensus 243 ------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~-----~~~~ 306 (407)
++.-++.+-...+..++..+... + ....+...+|. +.+.... +-..+.++.|.+.. ...+
T Consensus 253 FlQlagFmsmNldrH~~aH~~~~~~Lv~~-D---~~~Ae~h~~FYdEYlavmdl~aEfYLqTid~VFqq~~LpkG~~vhr 328 (415)
T COG4553 253 FLQLAGFMSMNLDRHIDAHKDFFLSLVKN-D---GDSAEKHREFYDEYLAVMDLTAEFYLQTIDEVFQQHALPKGEMVHR 328 (415)
T ss_pred HHHhhhHhhcChhhhHHHHHHHHHHHHcc-c---chhHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhcccCCceeec
Confidence 11112222222333333222110 0 01111112222 2111110 00111122222111 1111
Q ss_pred -----cCCC-ccceeeeecCCCCCCCCCCCC--hhHHhcCCCe--EEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHH
Q 015401 307 -----IKHV-RIPLLCIQAQNDPIAPSRGIP--CEDIKANPNC--LLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLE 376 (407)
Q Consensus 307 -----l~~i-~~Pvlii~g~~D~~~~~~~~~--~~~~~~~~~~--~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~ 376 (407)
...| ++-++-+-|+.|.+....... ..++...|.. +...-++.||.+.+.+..- +..+...|.+|+.
T Consensus 329 g~~vdp~~I~~~aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe~mk~hy~qp~vGHYGVFnGsrf---r~eIvPri~dFI~ 405 (415)
T COG4553 329 GKPVDPTAITNVALFTVEGENDDISGVGQTKAAHDLCSNIPEDMKQHYMQPDVGHYGVFNGSRF---REEIVPRIRDFIR 405 (415)
T ss_pred CCcCChhheeceeEEEeecccccccccchhHHHHHHHhcChHHHHHHhcCCCCCccceeccchH---HHHHHHHHHHHHH
Confidence 1222 367888999999988765431 3455555542 5667789999999987653 3336778899998
Q ss_pred HHHHhc
Q 015401 377 HLERAS 382 (407)
Q Consensus 377 ~~~~~~ 382 (407)
++....
T Consensus 406 ~~d~~~ 411 (415)
T COG4553 406 RYDRSN 411 (415)
T ss_pred HhCccc
Confidence 875543
No 189
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.00 E-value=0.0017 Score=51.27 Aligned_cols=55 Identities=15% Similarity=0.245 Sum_probs=37.1
Q ss_pred ChhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCC----CCceeEEEEcCC
Q 015401 168 FLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHS----CPLSGAVSLCNP 222 (407)
Q Consensus 168 ~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~----~~v~~~v~l~~p 222 (407)
+.+.+.+.++.+..+++..++++.|||+||.+|..++...... .....++..++|
T Consensus 46 ~~~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P 104 (140)
T PF01764_consen 46 LYDQILDALKELVEKYPDYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAP 104 (140)
T ss_dssp HHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S
T ss_pred HHHHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCc
Confidence 3456666666777778878999999999999998887653321 013455555554
No 190
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=96.99 E-value=0.00087 Score=64.01 Aligned_cols=91 Identities=10% Similarity=0.082 Sum_probs=61.3
Q ss_pred HHHHHHHHhCCcEEEEEeCCCCCCCCCCCCC--cccCCChhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccC-
Q 015401 132 RHMLLRARSKGWRVVVFNSRGCGDSPVTTPQ--FYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHES- 208 (407)
Q Consensus 132 ~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~--~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p- 208 (407)
..++..|.+.||. -.|+.|...--..... ...+.+...+...|+.+.....+++++|+||||||.+++.++..-.
T Consensus 159 ~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv~~ 236 (642)
T PLN02517 159 AVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWVEA 236 (642)
T ss_pred HHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhccc
Confidence 6788889999986 3444443322111111 1124556778888888877655679999999999999998876321
Q ss_pred ---------C---CCCceeEEEEcCCCC
Q 015401 209 ---------H---SCPLSGAVSLCNPFN 224 (407)
Q Consensus 209 ---------~---~~~v~~~v~l~~p~~ 224 (407)
. ...|++.|.+++|+.
T Consensus 237 ~~~~gG~gG~~W~dKyI~s~I~Iagp~l 264 (642)
T PLN02517 237 PAPMGGGGGPGWCAKHIKAVMNIGGPFL 264 (642)
T ss_pred cccccCCcchHHHHHHHHHheecccccC
Confidence 0 024899999999874
No 191
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=96.97 E-value=0.00067 Score=62.60 Aligned_cols=91 Identities=11% Similarity=0.157 Sum_probs=66.5
Q ss_pred HHHHHHHHHHHhCCcE------EEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHH
Q 015401 129 SYVRHMLLRARSKGWR------VVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIR 202 (407)
Q Consensus 129 ~~~~~~~~~l~~~g~~------vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~ 202 (407)
.|+..++..+..-||. -..+|+| .|-.... -.+.+...+...++...+..+++|+++++|||||.+.+.
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwR---ls~~~~e--~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~ly 198 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWR---LSYHNSE--ERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLY 198 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchh---hccCChh--HHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHH
Confidence 4667888888888887 4567887 2211111 123445778888888888878789999999999999999
Q ss_pred HHhccCCC------CCceeEEEEcCCCC
Q 015401 203 YLGHESHS------CPLSGAVSLCNPFN 224 (407)
Q Consensus 203 ~a~~~p~~------~~v~~~v~l~~p~~ 224 (407)
+....++. ..|++.+.+++|+-
T Consensus 199 Fl~w~~~~~~~W~~k~I~sfvnig~p~l 226 (473)
T KOG2369|consen 199 FLKWVEAEGPAWCDKYIKSFVNIGAPWL 226 (473)
T ss_pred HHhcccccchhHHHHHHHHHHccCchhc
Confidence 99888772 23778888888773
No 192
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.97 E-value=0.013 Score=54.64 Aligned_cols=109 Identities=19% Similarity=0.279 Sum_probs=80.2
Q ss_pred CCcEEEEeCCCCCCCccHHH----HHHHHHHHhCCcEEEEEeCCCCCCCCCCCC-------CcccCCChhHHHHHHHHHH
Q 015401 112 DSPVLILMPGLTGGSEDSYV----RHMLLRARSKGWRVVVFNSRGCGDSPVTTP-------QFYSASFLGDMQEVVAHVG 180 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~----~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~-------~~~~~~~~~Dl~~~l~~l~ 180 (407)
++|..|+|-|=+. ..+.|+ ........+.|-.|+.+++|-+|.|..... .++......|+..+|+.+.
T Consensus 85 ~gPiFLmIGGEgp-~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n 163 (514)
T KOG2182|consen 85 GGPIFLMIGGEGP-ESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMN 163 (514)
T ss_pred CCceEEEEcCCCC-CCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHH
Confidence 6788888877321 111111 123334556789999999999998842211 1233455789999999999
Q ss_pred hhCC---CCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCC
Q 015401 181 SKYP---KAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (407)
Q Consensus 181 ~~~~---~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~ 223 (407)
.+++ +.+.+.+|-|+-|.++..+=..+|+. +.|.|.-++|.
T Consensus 164 ~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel--~~GsvASSapv 207 (514)
T KOG2182|consen 164 AKFNFSDDSKWITFGGSYSGSLSAWFREKYPEL--TVGSVASSAPV 207 (514)
T ss_pred hhcCCCCCCCeEEECCCchhHHHHHHHHhCchh--heeecccccce
Confidence 9875 23899999999999999999999999 99999988886
No 193
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=96.88 E-value=0.0073 Score=57.42 Aligned_cols=139 Identities=17% Similarity=0.205 Sum_probs=82.0
Q ss_pred CccEEEEEcC--CCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHHHHHHHHHH-----H--------------hC
Q 015401 83 KLKRECIRTK--DDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRA-----R--------------SK 141 (407)
Q Consensus 83 ~~~r~~~~~~--dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~~~~~l-----~--------------~~ 141 (407)
.....++... .+..+.+.+++... .+.++|+||.+.|.+|+|. .+ .+.... . .+
T Consensus 10 ~~~sGyl~~~~~~~~~lfyw~~~s~~--~~~~~Pl~~wlnGGPG~SS-~~--g~f~e~GP~~~~~~~~~~l~~n~~sW~~ 84 (415)
T PF00450_consen 10 KQYSGYLPVNDNENAHLFYWFFESRN--DPEDDPLILWLNGGPGCSS-MW--GLFGENGPFRINPDGPYTLEDNPYSWNK 84 (415)
T ss_dssp EEEEEEEEECTTTTEEEEEEEEE-SS--GGCSS-EEEEEE-TTTB-T-HH--HHHCTTSSEEEETTSTSEEEE-TT-GGG
T ss_pred eEEEEEEecCCCCCcEEEEEEEEeCC--CCCCccEEEEecCCceecc-cc--ccccccCceEEeeccccccccccccccc
Confidence 3344566666 44455555554432 4568899999999998774 22 221110 0 12
Q ss_pred CcEEEEEeCC-CCCCCCCCCCCc---ccCCChhHHHHHHHHHHhhCC---CCcEEEEEechhHHHHHHHHhc---cCC--
Q 015401 142 GWRVVVFNSR-GCGDSPVTTPQF---YSASFLGDMQEVVAHVGSKYP---KAHLYAVGWSLGANILIRYLGH---ESH-- 209 (407)
Q Consensus 142 g~~vi~~D~r-G~G~S~~~~~~~---~~~~~~~Dl~~~l~~l~~~~~---~~~v~lvG~S~Gg~ia~~~a~~---~p~-- 209 (407)
-.+++-+|.| |.|.|-...... +.+..++|+..+|...-.++| ..+++|.|-|+||..+-.+|.+ ...
T Consensus 85 ~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~ 164 (415)
T PF00450_consen 85 FANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKG 164 (415)
T ss_dssp TSEEEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC-
T ss_pred ccceEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccc
Confidence 2689999955 999995444432 345557777777777766665 4599999999999987666543 111
Q ss_pred ---CCCceeEEEEcCCCCHH
Q 015401 210 ---SCPLSGAVSLCNPFNLV 226 (407)
Q Consensus 210 ---~~~v~~~v~l~~p~~~~ 226 (407)
...++++++.++-.+..
T Consensus 165 ~~~~inLkGi~IGng~~dp~ 184 (415)
T PF00450_consen 165 DQPKINLKGIAIGNGWIDPR 184 (415)
T ss_dssp -STTSEEEEEEEESE-SBHH
T ss_pred cccccccccceecCcccccc
Confidence 23488888877766554
No 194
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=96.86 E-value=0.0019 Score=53.34 Aligned_cols=53 Identities=15% Similarity=0.349 Sum_probs=43.7
Q ss_pred hhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhc------cCCCCCceeEEEEcCCC
Q 015401 169 LGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGH------ESHSCPLSGAVSLCNPF 223 (407)
Q Consensus 169 ~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~------~p~~~~v~~~v~l~~p~ 223 (407)
+.++...++....+.|+.+++|+|+|.||.++..++.. ..++ |.++++++.|.
T Consensus 64 ~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~--I~avvlfGdP~ 122 (179)
T PF01083_consen 64 VANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADR--IAAVVLFGDPR 122 (179)
T ss_dssp HHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHH--EEEEEEES-TT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhh--EEEEEEecCCc
Confidence 56777778777788899999999999999999999877 2233 99999999886
No 195
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.78 E-value=0.0029 Score=54.75 Aligned_cols=54 Identities=13% Similarity=0.132 Sum_probs=36.8
Q ss_pred hhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCC--CCceeEEEEcCC
Q 015401 169 LGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHS--CPLSGAVSLCNP 222 (407)
Q Consensus 169 ~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~--~~v~~~v~l~~p 222 (407)
..++...++.+..++|+.++++.|||+||.+|..++...... .....++..++|
T Consensus 111 ~~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P 166 (229)
T cd00519 111 YNQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQP 166 (229)
T ss_pred HHHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCC
Confidence 445666666667778888999999999999998877654311 012345555554
No 196
>COG0627 Predicted esterase [General function prediction only]
Probab=96.74 E-value=0.0038 Score=56.19 Aligned_cols=109 Identities=26% Similarity=0.397 Sum_probs=63.7
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHH-HHHHhCCcEEEEEeCC--------------CCCCC---CCCCCC-----cccCC
Q 015401 111 PDSPVLILMPGLTGGSEDSYVRHML-LRARSKGWRVVVFNSR--------------GCGDS---PVTTPQ-----FYSAS 167 (407)
Q Consensus 111 ~~~p~vv~lHG~~g~~~~~~~~~~~-~~l~~~g~~vi~~D~r--------------G~G~S---~~~~~~-----~~~~~ 167 (407)
.+-|+++++||..++....|...-+ ......|+.+++.|-. |-+.| +...+. +..++
T Consensus 52 ~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~t 131 (316)
T COG0627 52 RDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWET 131 (316)
T ss_pred CCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhH
Confidence 3568899999988764323322222 2344567777776332 22222 111110 11111
Q ss_pred C-hhHHHHHHHHHHhhCC-C---CcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCC
Q 015401 168 F-LGDMQEVVAHVGSKYP-K---AHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (407)
Q Consensus 168 ~-~~Dl~~~l~~l~~~~~-~---~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~ 224 (407)
+ ++++- ..+...++ . ....++||||||.=|+.+|..+|++ ++.+..+++..+
T Consensus 132 fl~~ELP---~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~--f~~~sS~Sg~~~ 188 (316)
T COG0627 132 FLTQELP---ALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDR--FKSASSFSGILS 188 (316)
T ss_pred HHHhhhh---HHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcch--hceecccccccc
Confidence 1 22222 23333333 1 2689999999999999999999998 999888887654
No 197
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.65 E-value=0.099 Score=45.24 Aligned_cols=35 Identities=14% Similarity=0.092 Sum_probs=31.5
Q ss_pred CcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCC
Q 015401 186 AHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNP 222 (407)
Q Consensus 186 ~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p 222 (407)
.+-.++|||+||.+++.....+|+. +...+++++.
T Consensus 137 ~~~~i~GhSlGGLfvl~aLL~~p~~--F~~y~~~SPS 171 (264)
T COG2819 137 ERTAIIGHSLGGLFVLFALLTYPDC--FGRYGLISPS 171 (264)
T ss_pred ccceeeeecchhHHHHHHHhcCcch--hceeeeecch
Confidence 3689999999999999999999998 9898888864
No 198
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=96.65 E-value=0.0043 Score=41.02 Aligned_cols=46 Identities=20% Similarity=0.224 Sum_probs=26.6
Q ss_pred CCccEEEEEcCCCCEEEEEeecCCC--CCCCCCCcEEEEeCCCCCCCc
Q 015401 82 VKLKRECIRTKDDGSVALDWISGDH--QLLPPDSPVLILMPGLTGGSE 127 (407)
Q Consensus 82 ~~~~r~~~~~~dg~~~~~~~~~~~~--~~~~~~~p~vv~lHG~~g~~~ 127 (407)
.+.+...+++.||-.+.+.-.+... ......+|+|++.||+.+++.
T Consensus 10 Y~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~ 57 (63)
T PF04083_consen 10 YPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSD 57 (63)
T ss_dssp ---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GG
T ss_pred CCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChH
Confidence 4567889999999988887655442 223457899999999988775
No 199
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.64 E-value=0.0047 Score=52.81 Aligned_cols=53 Identities=21% Similarity=0.280 Sum_probs=39.7
Q ss_pred hHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCC--CCceeEEEEcCCC
Q 015401 170 GDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHS--CPLSGAVSLCNPF 223 (407)
Q Consensus 170 ~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~--~~v~~~v~l~~p~ 223 (407)
....+.++.+...++. ++++.|||.||++|..++...++. .+|..+....+|-
T Consensus 69 ~~A~~yl~~~~~~~~~-~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 69 KSALAYLKKIAKKYPG-KIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred HHHHHHHHHHHHhCCC-CEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCC
Confidence 4556667777666766 599999999999999888774321 2388988888764
No 200
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=96.39 E-value=0.012 Score=53.47 Aligned_cols=91 Identities=16% Similarity=0.202 Sum_probs=68.3
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEE
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAV 191 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lv 191 (407)
+.-.-||+-|=+| +...-+.....|.++|+.|+-+|..=+=.|+.+ .+..++|+..++++-..+++..++.++
T Consensus 259 sd~~av~~SGDGG--Wr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~rt-----Pe~~a~Dl~r~i~~y~~~w~~~~~~li 331 (456)
T COG3946 259 SDTVAVFYSGDGG--WRDLDKEVAEALQKQGVPVVGVDSLRYFWSERT-----PEQIAADLSRLIRFYARRWGAKRVLLI 331 (456)
T ss_pred cceEEEEEecCCc--hhhhhHHHHHHHHHCCCceeeeehhhhhhccCC-----HHHHHHHHHHHHHHHHHhhCcceEEEE
Confidence 4456677777544 334456778889999999999997655455432 356789999999999998888899999
Q ss_pred EechhHHHHHHHHhccCC
Q 015401 192 GWSLGANILIRYLGHESH 209 (407)
Q Consensus 192 G~S~Gg~ia~~~a~~~p~ 209 (407)
|+|+|+=+.-..-.+.|.
T Consensus 332 GySfGADvlP~~~n~L~~ 349 (456)
T COG3946 332 GYSFGADVLPFAYNRLPP 349 (456)
T ss_pred eecccchhhHHHHHhCCH
Confidence 999999876555444443
No 201
>PLN02162 triacylglycerol lipase
Probab=96.20 E-value=0.014 Score=54.58 Aligned_cols=53 Identities=13% Similarity=0.221 Sum_probs=36.1
Q ss_pred HHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhc---cCCC---CCceeEEEEcCCC
Q 015401 171 DMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGH---ESHS---CPLSGAVSLCNPF 223 (407)
Q Consensus 171 Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~---~p~~---~~v~~~v~l~~p~ 223 (407)
.+.+.++.+..++++.++++.|||+||.+|..+|.. .... ..+.+++..+.|-
T Consensus 263 ~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqPR 321 (475)
T PLN02162 263 TIRQMLRDKLARNKNLKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQPR 321 (475)
T ss_pred HHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCCC
Confidence 455556666666788899999999999999887542 1111 1255677777663
No 202
>PLN02454 triacylglycerol lipase
Probab=96.17 E-value=0.0076 Score=55.67 Aligned_cols=40 Identities=18% Similarity=0.195 Sum_probs=32.6
Q ss_pred CChhHHHHHHHHHHhhCCCCc--EEEEEechhHHHHHHHHhc
Q 015401 167 SFLGDMQEVVAHVGSKYPKAH--LYAVGWSLGANILIRYLGH 206 (407)
Q Consensus 167 ~~~~Dl~~~l~~l~~~~~~~~--v~lvG~S~Gg~ia~~~a~~ 206 (407)
...+++...++.+...|+..+ |++.||||||.+|+.+|..
T Consensus 207 S~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 207 SARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 345677788888888887655 9999999999999988754
No 203
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=96.17 E-value=0.062 Score=50.75 Aligned_cols=137 Identities=15% Similarity=0.140 Sum_probs=83.2
Q ss_pred CCccEEEEEcC--CCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHHHHHHHHHH----Hh--------------C
Q 015401 82 VKLKRECIRTK--DDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRA----RS--------------K 141 (407)
Q Consensus 82 ~~~~r~~~~~~--dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~~~~~l----~~--------------~ 141 (407)
+.....++... .|..+.+.+++.. ..|..+|+||.+.|.+|.|.- ..+..++ .. +
T Consensus 42 f~~ysGYv~v~~~~~~~LFYwf~eS~--~~P~~dPlvLWLnGGPGCSSl---~G~~~E~GPf~v~~~G~tL~~N~ySWnk 116 (454)
T KOG1282|consen 42 FKQYSGYVTVNESEGRQLFYWFFESE--NNPETDPLVLWLNGGPGCSSL---GGLFEENGPFRVKYNGKTLYLNPYSWNK 116 (454)
T ss_pred cccccceEECCCCCCceEEEEEEEcc--CCCCCCCEEEEeCCCCCccch---hhhhhhcCCeEEcCCCCcceeCCccccc
Confidence 44455677777 4566666666654 345678999999999887741 2222211 11 1
Q ss_pred CcEEEEEeCC-CCCCCC-CCCCC--cccCCChhHHHHHHHHHHhhCC---CCcEEEEEechhHHHHHHHHhc----cC--
Q 015401 142 GWRVVVFNSR-GCGDSP-VTTPQ--FYSASFLGDMQEVVAHVGSKYP---KAHLYAVGWSLGANILIRYLGH----ES-- 208 (407)
Q Consensus 142 g~~vi~~D~r-G~G~S~-~~~~~--~~~~~~~~Dl~~~l~~l~~~~~---~~~v~lvG~S~Gg~ia~~~a~~----~p-- 208 (407)
--.++-+|.| |.|.|= ..... ...+..+.|...++...-.++| ..++++.|-|++|..+-.+|.+ ..
T Consensus 117 ~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~ 196 (454)
T KOG1282|consen 117 EANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKC 196 (454)
T ss_pred cccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccc
Confidence 1367888887 778772 22211 2234446777777766555665 5799999999999776665543 21
Q ss_pred C--CCCceeEEEEcCCC
Q 015401 209 H--SCPLSGAVSLCNPF 223 (407)
Q Consensus 209 ~--~~~v~~~v~l~~p~ 223 (407)
. .-.++|+++-.+-.
T Consensus 197 ~~~~iNLkG~~IGNg~t 213 (454)
T KOG1282|consen 197 CKPNINLKGYAIGNGLT 213 (454)
T ss_pred cCCcccceEEEecCccc
Confidence 1 12377777654433
No 204
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=96.13 E-value=0.041 Score=50.34 Aligned_cols=107 Identities=16% Similarity=0.186 Sum_probs=83.8
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCC---CcccCCChhHHHHHHHHHHhhCCCCcE
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTP---QFYSASFLGDMQEVVAHVGSKYPKAHL 188 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~---~~~~~~~~~Dl~~~l~~l~~~~~~~~v 188 (407)
++|+|+..-|..-+.. .....+. .++. -+-+.+.+|-+|.|..... .+++..-++|...+++.++.-|+. +.
T Consensus 62 drPtV~~T~GY~~~~~-p~r~Ept-~Lld--~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~-kW 136 (448)
T PF05576_consen 62 DRPTVLYTEGYNVSTS-PRRSEPT-QLLD--GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPG-KW 136 (448)
T ss_pred CCCeEEEecCcccccC-ccccchh-Hhhc--cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccC-Cc
Confidence 7899999999865433 2222333 3333 3778899999999954322 356677799999999999999987 79
Q ss_pred EEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCCH
Q 015401 189 YAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFNL 225 (407)
Q Consensus 189 ~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~~ 225 (407)
+--|.|=||+.++.+=.-+|+. |++.|.-.+|.+.
T Consensus 137 ISTG~SKGGmTa~y~rrFyP~D--VD~tVaYVAP~~~ 171 (448)
T PF05576_consen 137 ISTGGSKGGMTAVYYRRFYPDD--VDGTVAYVAPNDV 171 (448)
T ss_pred eecCcCCCceeEEEEeeeCCCC--CCeeeeeeccccc
Confidence 9999999999999888889998 9999998888653
No 205
>PLN00413 triacylglycerol lipase
Probab=96.13 E-value=0.014 Score=54.57 Aligned_cols=53 Identities=17% Similarity=0.293 Sum_probs=37.7
Q ss_pred HHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhc---c-CCC--CCceeEEEEcCCC
Q 015401 171 DMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGH---E-SHS--CPLSGAVSLCNPF 223 (407)
Q Consensus 171 Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~---~-p~~--~~v~~~v~l~~p~ 223 (407)
++...++.+..++|+.++++.|||+||.+|..+|.. + +.. ..+.++...+.|-
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PR 327 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPR 327 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCC
Confidence 456667777777888899999999999999987742 1 111 1255677777653
No 206
>PLN02209 serine carboxypeptidase
Probab=96.09 E-value=0.086 Score=50.08 Aligned_cols=136 Identities=21% Similarity=0.188 Sum_probs=78.8
Q ss_pred cEEEEEcCC--CCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHHHHHHHH----------------HHH------h
Q 015401 85 KRECIRTKD--DGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLL----------------RAR------S 140 (407)
Q Consensus 85 ~r~~~~~~d--g~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~~~~----------------~l~------~ 140 (407)
...++...+ +..+.+.+.+.. ..+...|+|+.+.|.+|++. .+ -.+.. .+. .
T Consensus 40 ~sGy~~v~~~~~~~lf~~f~es~--~~~~~~Pl~lWlnGGPG~SS-~~-g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~ 115 (437)
T PLN02209 40 ETGYIGIGEEENVQFFYYFIKSD--KNPQEDPLIIWLNGGPGCSC-LS-GLFFENGPLALKNKVYNGSVPSLVSTTYSWT 115 (437)
T ss_pred EEEEEEecCCCCeEEEEEEEecC--CCCCCCCEEEEECCCCcHHH-hh-hHHHhcCCceeccCCCCCCcccceeCCCchh
Confidence 345666654 344554444433 23567899999999988763 22 11110 010 1
Q ss_pred CCcEEEEEe-CCCCCCCCCCCCC--cccCCChhHHHHHHHHHHhhCC---CCcEEEEEechhHHHHHHHHhccCC-----
Q 015401 141 KGWRVVVFN-SRGCGDSPVTTPQ--FYSASFLGDMQEVVAHVGSKYP---KAHLYAVGWSLGANILIRYLGHESH----- 209 (407)
Q Consensus 141 ~g~~vi~~D-~rG~G~S~~~~~~--~~~~~~~~Dl~~~l~~l~~~~~---~~~v~lvG~S~Gg~ia~~~a~~~p~----- 209 (407)
+-..++-+| .-|.|.|-...+. ...+..++|+..++...-..+| ..+++++|.|+||..+-.+|..--+
T Consensus 116 ~~anllfiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~ 195 (437)
T PLN02209 116 KTANIIFLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYIC 195 (437)
T ss_pred hcCcEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccc
Confidence 125788999 4588888433221 1122334666666666555555 4589999999999876666543211
Q ss_pred ---CCCceeEEEEcCCCC
Q 015401 210 ---SCPLSGAVSLCNPFN 224 (407)
Q Consensus 210 ---~~~v~~~v~l~~p~~ 224 (407)
.-.++++++.++-.+
T Consensus 196 ~~~~inl~Gi~igng~td 213 (437)
T PLN02209 196 CNPPINLQGYVLGNPITH 213 (437)
T ss_pred cCCceeeeeEEecCcccC
Confidence 123778777666444
No 207
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=95.94 E-value=0.016 Score=50.73 Aligned_cols=108 Identities=19% Similarity=0.181 Sum_probs=64.4
Q ss_pred CCCCcEEEEeCCCCCCCccHHHHHHHHHHHhCC----cEEEEEeCCCCCCCCCCCCCcc-cCCChhHH-HHHHHHHHhhC
Q 015401 110 PPDSPVLILMPGLTGGSEDSYVRHMLLRARSKG----WRVVVFNSRGCGDSPVTTPQFY-SASFLGDM-QEVVAHVGSKY 183 (407)
Q Consensus 110 ~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g----~~vi~~D~rG~G~S~~~~~~~~-~~~~~~Dl-~~~l~~l~~~~ 183 (407)
....|++++.||-.- ....-+...++.+...| -.++.+|.- ........+. .+.+.+.+ .+++=++...|
T Consensus 95 ~~k~pvl~~~DG~~~-~~~g~i~~~~dsli~~g~i~pai~vgid~~---d~~~R~~~~~~n~~~~~~L~~eLlP~v~~~y 170 (299)
T COG2382 95 LEKYPVLYLQDGQDW-FRSGRIPRILDSLIAAGEIPPAILVGIDYI---DVKKRREELHCNEAYWRFLAQELLPYVEERY 170 (299)
T ss_pred cccccEEEEeccHHH-HhcCChHHHHHHHHHcCCCCCceEEecCCC---CHHHHHHHhcccHHHHHHHHHHhhhhhhccC
Confidence 347799999999411 01111334555565554 344555542 1111111121 22333333 35555667777
Q ss_pred CC----CcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCC
Q 015401 184 PK----AHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (407)
Q Consensus 184 ~~----~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~ 223 (407)
+. ..-+|+|.|+||.+++..+..+|+. +-.++..++.+
T Consensus 171 p~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~--FG~V~s~Sps~ 212 (299)
T COG2382 171 PTSADADGRVLAGDSLGGLVSLYAGLRHPER--FGHVLSQSGSF 212 (299)
T ss_pred cccccCCCcEEeccccccHHHHHHHhcCchh--hceeeccCCcc
Confidence 63 2468999999999999999999998 88888777654
No 208
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=95.79 E-value=0.073 Score=50.50 Aligned_cols=137 Identities=20% Similarity=0.153 Sum_probs=77.3
Q ss_pred cEEEEEcCC--CCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccH-HHHHHHH-------------HHH------hCC
Q 015401 85 KRECIRTKD--DGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDS-YVRHMLL-------------RAR------SKG 142 (407)
Q Consensus 85 ~r~~~~~~d--g~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~-~~~~~~~-------------~l~------~~g 142 (407)
...+++..+ +..+.+.+.+.. ..+...|+|+.+.|.+|.+... .+..... .+. .+-
T Consensus 38 ~sGy~~v~~~~~~~lfy~f~es~--~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~ 115 (433)
T PLN03016 38 ETGYIGIGEDENVQFFYYFIKSE--NNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKM 115 (433)
T ss_pred EEEEEEecCCCCeEEEEEEEecC--CCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhc
Confidence 355666654 334444444433 2356789999999988866310 1111100 010 122
Q ss_pred cEEEEEe-CCCCCCCCCCCCCcccC--CChhHHHHHHHHHHhhCC---CCcEEEEEechhHHHHHHHHhccCC-------
Q 015401 143 WRVVVFN-SRGCGDSPVTTPQFYSA--SFLGDMQEVVAHVGSKYP---KAHLYAVGWSLGANILIRYLGHESH------- 209 (407)
Q Consensus 143 ~~vi~~D-~rG~G~S~~~~~~~~~~--~~~~Dl~~~l~~l~~~~~---~~~v~lvG~S~Gg~ia~~~a~~~p~------- 209 (407)
..++-+| .-|.|.|-...+..... ..++|+..++...-..+| ..+++++|.|+||..+-.+|.+--+
T Consensus 116 anllfiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~ 195 (433)
T PLN03016 116 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 195 (433)
T ss_pred CcEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccC
Confidence 5789999 55899885333222111 223566666665544554 4689999999999877666543211
Q ss_pred -CCCceeEEEEcCCC
Q 015401 210 -SCPLSGAVSLCNPF 223 (407)
Q Consensus 210 -~~~v~~~v~l~~p~ 223 (407)
.-.++|+++.++..
T Consensus 196 ~~inLkGi~iGNg~t 210 (433)
T PLN03016 196 PPINLQGYMLGNPVT 210 (433)
T ss_pred CcccceeeEecCCCc
Confidence 12377777766533
No 209
>PLN02934 triacylglycerol lipase
Probab=95.53 E-value=0.036 Score=52.37 Aligned_cols=35 Identities=17% Similarity=0.260 Sum_probs=30.0
Q ss_pred HHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHh
Q 015401 171 DMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLG 205 (407)
Q Consensus 171 Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~ 205 (407)
.+...++.+..++|+.++++.|||+||.+|..++.
T Consensus 306 ~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 46777777778889999999999999999988864
No 210
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=95.35 E-value=0.043 Score=47.35 Aligned_cols=54 Identities=20% Similarity=0.297 Sum_probs=42.5
Q ss_pred CCChhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCC
Q 015401 166 ASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (407)
Q Consensus 166 ~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~ 224 (407)
+.+..+..+++..++..||+.++.+-|||+||.+|..+..++.-. +|.+.+|-+
T Consensus 256 dryySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fglP-----~VaFesPGd 309 (425)
T KOG4540|consen 256 DRYYSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFGLP-----VVAFESPGD 309 (425)
T ss_pred cchhHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccCCc-----eEEecCchh
Confidence 345667888888999999999999999999999998888777632 444555543
No 211
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=95.35 E-value=0.043 Score=47.35 Aligned_cols=54 Identities=20% Similarity=0.297 Sum_probs=42.5
Q ss_pred CCChhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCC
Q 015401 166 ASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (407)
Q Consensus 166 ~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~ 224 (407)
+.+..+..+++..++..||+.++.+-|||+||.+|..+..++.-. +|.+.+|-+
T Consensus 256 dryySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fglP-----~VaFesPGd 309 (425)
T COG5153 256 DRYYSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFGLP-----VVAFESPGD 309 (425)
T ss_pred cchhHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccCCc-----eEEecCchh
Confidence 345667888888999999999999999999999998888777632 444555543
No 212
>PLN02571 triacylglycerol lipase
Probab=95.23 E-value=0.03 Score=51.90 Aligned_cols=38 Identities=21% Similarity=0.228 Sum_probs=29.1
Q ss_pred hhHHHHHHHHHHhhCCCC--cEEEEEechhHHHHHHHHhc
Q 015401 169 LGDMQEVVAHVGSKYPKA--HLYAVGWSLGANILIRYLGH 206 (407)
Q Consensus 169 ~~Dl~~~l~~l~~~~~~~--~v~lvG~S~Gg~ia~~~a~~ 206 (407)
.+++...++.+...+++. ++++.||||||.+|+..|..
T Consensus 207 r~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 207 RDQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 456666666666667653 68999999999999988764
No 213
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=94.99 E-value=0.11 Score=49.03 Aligned_cols=96 Identities=18% Similarity=0.183 Sum_probs=65.9
Q ss_pred CCCCcEEEEeCCCCCCCccHHHHHHHHHH----HhCC---------------cEEEEEe-CCCCCCCCC--CCCCcccCC
Q 015401 110 PPDSPVLILMPGLTGGSEDSYVRHMLLRA----RSKG---------------WRVVVFN-SRGCGDSPV--TTPQFYSAS 167 (407)
Q Consensus 110 ~~~~p~vv~lHG~~g~~~~~~~~~~~~~l----~~~g---------------~~vi~~D-~rG~G~S~~--~~~~~~~~~ 167 (407)
+.++|+++.+.|.+|++. .+ -.+ -.+ ...+ =.++-+| .-|.|.|.. ....-....
T Consensus 98 p~~rPvi~wlNGGPGcSS-~~-g~l-~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~ 174 (498)
T COG2939 98 PANRPVIFWLNGGPGCSS-VT-GLL-GELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEG 174 (498)
T ss_pred CCCCceEEEecCCCChHh-hh-hhh-hhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhc
Confidence 557999999999998764 22 111 111 1111 2688889 568888863 333445667
Q ss_pred ChhHHHHHHHHHHhhCC-----CCcEEEEEechhHHHHHHHHhccC
Q 015401 168 FLGDMQEVVAHVGSKYP-----KAHLYAVGWSLGANILIRYLGHES 208 (407)
Q Consensus 168 ~~~Dl~~~l~~l~~~~~-----~~~v~lvG~S~Gg~ia~~~a~~~p 208 (407)
..+|+..+.+.+...++ .++.+|+|-|+||.-+..+|..--
T Consensus 175 ~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~ 220 (498)
T COG2939 175 AGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELL 220 (498)
T ss_pred cchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHH
Confidence 78899888888776554 248999999999999888776543
No 214
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=94.97 E-value=0.41 Score=49.83 Aligned_cols=97 Identities=12% Similarity=0.146 Sum_probs=60.3
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCC-CCCCCCcccCCChhHHHHHHHHHHhhCCCCcEE
Q 015401 111 PDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDS-PVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLY 189 (407)
Q Consensus 111 ~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S-~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~ 189 (407)
...|++.|+|.+-|... . +..++.. ...|.+|.- ....+..++ -+-....++.+++--|..+..
T Consensus 2121 se~~~~Ffv~pIEG~tt-~-l~~la~r----------le~PaYglQ~T~~vP~dSi---es~A~~yirqirkvQP~GPYr 2185 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTT-A-LESLASR----------LEIPAYGLQCTEAVPLDSI---ESLAAYYIRQIRKVQPEGPYR 2185 (2376)
T ss_pred ccCCceEEEeccccchH-H-HHHHHhh----------cCCcchhhhccccCCcchH---HHHHHHHHHHHHhcCCCCCee
Confidence 36789999999876432 1 2333322 223444432 111222222 223345667777766778999
Q ss_pred EEEechhHHHHHHHHhccCCCCCceeEEEEcCC
Q 015401 190 AVGWSLGANILIRYLGHESHSCPLSGAVSLCNP 222 (407)
Q Consensus 190 lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p 222 (407)
++|+|+|+.++..+|....+......+|++.+.
T Consensus 2186 l~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGs 2218 (2376)
T KOG1202|consen 2186 LAGYSYGACLAFEMASQLQEQQSPAPLILLDGS 2218 (2376)
T ss_pred eeccchhHHHHHHHHHHHHhhcCCCcEEEecCc
Confidence 999999999999998766554336668888764
No 215
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=94.95 E-value=0.05 Score=45.49 Aligned_cols=68 Identities=16% Similarity=0.071 Sum_probs=44.3
Q ss_pred hCCcEEEEEeCCCCCCCCCC-----CCCcccCCChhHHHHHHHHHHhhC-CCCcEEEEEechhHHHHHHHHhcc
Q 015401 140 SKGWRVVVFNSRGCGDSPVT-----TPQFYSASFLGDMQEVVAHVGSKY-PKAHLYAVGWSLGANILIRYLGHE 207 (407)
Q Consensus 140 ~~g~~vi~~D~rG~G~S~~~-----~~~~~~~~~~~Dl~~~l~~l~~~~-~~~~v~lvG~S~Gg~ia~~~a~~~ 207 (407)
..-.+|+++=+|=....... ......+.-..|+.++.++...++ .+++++|+|||.|+.++..++.++
T Consensus 43 ~~~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 43 NGVCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hcCCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 34468888888743221111 111112223568887777766665 456999999999999999998776
No 216
>PLN02310 triacylglycerol lipase
Probab=94.76 E-value=0.069 Score=49.44 Aligned_cols=52 Identities=17% Similarity=0.225 Sum_probs=32.9
Q ss_pred hHHHHHHHHHHhhCC----CCcEEEEEechhHHHHHHHHhcc----CCCCCceeEEEEcCCC
Q 015401 170 GDMQEVVAHVGSKYP----KAHLYAVGWSLGANILIRYLGHE----SHSCPLSGAVSLCNPF 223 (407)
Q Consensus 170 ~Dl~~~l~~l~~~~~----~~~v~lvG~S~Gg~ia~~~a~~~----p~~~~v~~~v~l~~p~ 223 (407)
+.+.+.++.+...|+ ..+|.+.|||+||.+|+..|... +.. -..++..++|-
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~~~~--~v~vyTFGsPR 248 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTIPDL--FVSVISFGAPR 248 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhCcCc--ceeEEEecCCC
Confidence 445555555554442 35899999999999998877542 222 23466666653
No 217
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=94.65 E-value=0.071 Score=48.72 Aligned_cols=88 Identities=18% Similarity=0.219 Sum_probs=47.8
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCC-CCCCCC--cccCCChhHHHHHHHHHHhhCCCCcE
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDS-PVTTPQ--FYSASFLGDMQEVVAHVGSKYPKAHL 188 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S-~~~~~~--~~~~~~~~Dl~~~l~~l~~~~~~~~v 188 (407)
+.-.||+.||+.++.. .|+...+.....+--.. ++..+|+-+. ..+... .-....++++.+.+...... ++
T Consensus 79 ~~HLvVlthGi~~~~~-~~~~~~~~~~~kk~p~~-~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si~----kI 152 (405)
T KOG4372|consen 79 PKHLVVLTHGLHGADM-EYWKEKIEQMTKKMPDK-LIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSIE----KI 152 (405)
T ss_pred CceEEEeccccccccH-HHHHHHHHhhhcCCCcc-eEeeeccccchhhccccceeeecccHHHHhhhhhccccc----ee
Confidence 4568999999988333 44445454444432121 3333443222 222222 11234455555544444433 99
Q ss_pred EEEEechhHHHHHHHHh
Q 015401 189 YAVGWSLGANILIRYLG 205 (407)
Q Consensus 189 ~lvG~S~Gg~ia~~~a~ 205 (407)
-++|||+||.++..+.+
T Consensus 153 SfvghSLGGLvar~AIg 169 (405)
T KOG4372|consen 153 SFVGHSLGGLVARYAIG 169 (405)
T ss_pred eeeeeecCCeeeeEEEE
Confidence 99999999988754443
No 218
>PLN02324 triacylglycerol lipase
Probab=94.63 E-value=0.056 Score=50.08 Aligned_cols=39 Identities=18% Similarity=0.169 Sum_probs=30.0
Q ss_pred ChhHHHHHHHHHHhhCCCC--cEEEEEechhHHHHHHHHhc
Q 015401 168 FLGDMQEVVAHVGSKYPKA--HLYAVGWSLGANILIRYLGH 206 (407)
Q Consensus 168 ~~~Dl~~~l~~l~~~~~~~--~v~lvG~S~Gg~ia~~~a~~ 206 (407)
..+.+.+.|+.+...|++. .|.+.|||+||.+|+..|..
T Consensus 195 areqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 195 AQEQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 4456666677777777753 69999999999999988753
No 219
>PLN02408 phospholipase A1
Probab=94.59 E-value=0.056 Score=49.41 Aligned_cols=55 Identities=22% Similarity=0.284 Sum_probs=36.2
Q ss_pred ChhHHHHHHHHHHhhCCCC--cEEEEEechhHHHHHHHHhccCCC---CCceeEEEEcCC
Q 015401 168 FLGDMQEVVAHVGSKYPKA--HLYAVGWSLGANILIRYLGHESHS---CPLSGAVSLCNP 222 (407)
Q Consensus 168 ~~~Dl~~~l~~l~~~~~~~--~v~lvG~S~Gg~ia~~~a~~~p~~---~~v~~~v~l~~p 222 (407)
..+++.+.++.+...+++. +|++.|||+||.+|..+|...... .+...++..++|
T Consensus 180 ~r~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~~V~v~tFGsP 239 (365)
T PLN02408 180 LQEMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDIKTTFKRAPMVTVISFGGP 239 (365)
T ss_pred HHHHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHHHHhcCCCCceEEEEcCCC
Confidence 3456666677777777754 599999999999998887653321 112335555554
No 220
>PLN02719 triacylglycerol lipase
Probab=94.07 E-value=0.083 Score=50.08 Aligned_cols=39 Identities=15% Similarity=0.169 Sum_probs=30.1
Q ss_pred ChhHHHHHHHHHHhhCCC-----CcEEEEEechhHHHHHHHHhc
Q 015401 168 FLGDMQEVVAHVGSKYPK-----AHLYAVGWSLGANILIRYLGH 206 (407)
Q Consensus 168 ~~~Dl~~~l~~l~~~~~~-----~~v~lvG~S~Gg~ia~~~a~~ 206 (407)
..+++.+.++.+...|++ .+|.+.|||+||.+|+..|..
T Consensus 275 aReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 275 AREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 345677777777777764 389999999999999987753
No 221
>PLN02847 triacylglycerol lipase
Probab=94.07 E-value=0.1 Score=50.33 Aligned_cols=36 Identities=19% Similarity=0.163 Sum_probs=27.0
Q ss_pred HHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhc
Q 015401 171 DMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGH 206 (407)
Q Consensus 171 Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~ 206 (407)
.+...+..+...+|+-+++++|||+||.+|..++..
T Consensus 236 ~i~~~L~kal~~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 236 LSTPCLLKALDEYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHHHHHHHHHCCCCeEEEeccChHHHHHHHHHHH
Confidence 333444555566787899999999999999877654
No 222
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.86 E-value=0.29 Score=39.09 Aligned_cols=36 Identities=17% Similarity=0.325 Sum_probs=33.0
Q ss_pred cEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCCC
Q 015401 187 HLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPFN 224 (407)
Q Consensus 187 ~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~ 224 (407)
...+-|-||||..|+++.-++|+. +.++|.+++.++
T Consensus 102 s~~~sgcsmGayhA~nfvfrhP~l--ftkvialSGvYd 137 (227)
T COG4947 102 STIVSGCSMGAYHAANFVFRHPHL--FTKVIALSGVYD 137 (227)
T ss_pred CccccccchhhhhhhhhheeChhH--hhhheeecceee
Confidence 577899999999999999999999 999999998776
No 223
>PLN02761 lipase class 3 family protein
Probab=93.71 E-value=0.12 Score=49.28 Aligned_cols=38 Identities=18% Similarity=0.164 Sum_probs=28.9
Q ss_pred ChhHHHHHHHHHHhhCC------CCcEEEEEechhHHHHHHHHh
Q 015401 168 FLGDMQEVVAHVGSKYP------KAHLYAVGWSLGANILIRYLG 205 (407)
Q Consensus 168 ~~~Dl~~~l~~l~~~~~------~~~v~lvG~S~Gg~ia~~~a~ 205 (407)
..+++...|+.+...|+ ..+|.+.|||+||.+|...|.
T Consensus 270 aR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 270 AREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 34566677777776663 347999999999999988774
No 224
>PLN02753 triacylglycerol lipase
Probab=93.52 E-value=0.11 Score=49.33 Aligned_cols=38 Identities=16% Similarity=0.085 Sum_probs=29.2
Q ss_pred ChhHHHHHHHHHHhhCC-----CCcEEEEEechhHHHHHHHHh
Q 015401 168 FLGDMQEVVAHVGSKYP-----KAHLYAVGWSLGANILIRYLG 205 (407)
Q Consensus 168 ~~~Dl~~~l~~l~~~~~-----~~~v~lvG~S~Gg~ia~~~a~ 205 (407)
..+++...++.+...|+ +.+|.+.|||+||.+|+..|.
T Consensus 289 ~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 289 AREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 34566666777766664 359999999999999998874
No 225
>PLN02802 triacylglycerol lipase
Probab=93.33 E-value=0.12 Score=48.92 Aligned_cols=39 Identities=21% Similarity=0.218 Sum_probs=28.9
Q ss_pred hhHHHHHHHHHHhhCCCC--cEEEEEechhHHHHHHHHhcc
Q 015401 169 LGDMQEVVAHVGSKYPKA--HLYAVGWSLGANILIRYLGHE 207 (407)
Q Consensus 169 ~~Dl~~~l~~l~~~~~~~--~v~lvG~S~Gg~ia~~~a~~~ 207 (407)
.+++.+-++.+...|++. .|++.|||+||.+|...|...
T Consensus 311 reqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 311 SESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 345666666666667643 689999999999998877643
No 226
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=93.13 E-value=0.19 Score=49.74 Aligned_cols=108 Identities=18% Similarity=0.055 Sum_probs=60.6
Q ss_pred CcEEEEeCCCCCCCcc--HH-HHHHHHHHHhCCcEEEEEeCC----CCCCCCCCCCCcccCCChhHHHHHHHHHHhhC--
Q 015401 113 SPVLILMPGLTGGSED--SY-VRHMLLRARSKGWRVVVFNSR----GCGDSPVTTPQFYSASFLGDMQEVVAHVGSKY-- 183 (407)
Q Consensus 113 ~p~vv~lHG~~g~~~~--~~-~~~~~~~l~~~g~~vi~~D~r----G~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~-- 183 (407)
-|++|++||.+-...+ .+ .......+..+..-|+.+++| |+.... . .......-..|...++++++...
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~-d-~~~~gN~gl~Dq~~AL~wv~~~I~~ 189 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTG-D-SAAPGNLGLFDQLLALRWVKDNIPS 189 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecC-C-CCCCCcccHHHHHHHHHHHHHHHHh
Confidence 7999999994311111 11 112222334456778888888 222111 1 11111112348888999888752
Q ss_pred -C--CCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCC
Q 015401 184 -P--KAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNP 222 (407)
Q Consensus 184 -~--~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p 222 (407)
+ ..+|.++|||.||..+..+......+.-+..+|.+++.
T Consensus 190 FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 190 FGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGN 231 (545)
T ss_pred cCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccc
Confidence 2 45899999999999886655332111125666666554
No 227
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=93.11 E-value=0.16 Score=46.65 Aligned_cols=57 Identities=12% Similarity=0.175 Sum_probs=40.8
Q ss_pred CCChhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhcc---CCC-CCceeEEEEcCC
Q 015401 166 ASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHE---SHS-CPLSGAVSLCNP 222 (407)
Q Consensus 166 ~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~---p~~-~~v~~~v~l~~p 222 (407)
..+...+.+.++.|...+|+-.+.+.|||+||.+|...|..- ... ..-.+++..+.|
T Consensus 151 ~~~~~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~i~~~~~~~~~~v~v~tFG~P 211 (336)
T KOG4569|consen 151 SLWNSGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALDLVKNGLKTSSPVKVYTFGQP 211 (336)
T ss_pred cccHHHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHHHHHcCCCCCCceEEEEecCC
Confidence 334477888888888888888999999999999998777532 111 113466666655
No 228
>PLN03037 lipase class 3 family protein; Provisional
Probab=93.05 E-value=0.11 Score=49.37 Aligned_cols=36 Identities=19% Similarity=0.230 Sum_probs=24.7
Q ss_pred HHHHHHHHHHhhCC----CCcEEEEEechhHHHHHHHHhc
Q 015401 171 DMQEVVAHVGSKYP----KAHLYAVGWSLGANILIRYLGH 206 (407)
Q Consensus 171 Dl~~~l~~l~~~~~----~~~v~lvG~S~Gg~ia~~~a~~ 206 (407)
++.+.+..+...|+ ..++.+.|||+||.+|+..|..
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 34444444444443 3479999999999999887754
No 229
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=92.59 E-value=0.39 Score=45.94 Aligned_cols=103 Identities=14% Similarity=0.113 Sum_probs=61.8
Q ss_pred CCCCcEEEEeCCCC-----CCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhh--
Q 015401 110 PPDSPVLILMPGLT-----GGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSK-- 182 (407)
Q Consensus 110 ~~~~p~vv~lHG~~-----g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~-- 182 (407)
|.++-.|+-+||.+ .-+++.|.+.++.. .|+.|+.+|+-= .+...+..-.+.+..+.-|+..+
T Consensus 393 p~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~a---L~cPiiSVdYSL-------APEaPFPRaleEv~fAYcW~inn~a 462 (880)
T KOG4388|consen 393 PRSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQA---LGCPIISVDYSL-------APEAPFPRALEEVFFAYCWAINNCA 462 (880)
T ss_pred CCCceEEEEecCCceeeeccccccHHHHHHHHH---hCCCeEEeeecc-------CCCCCCCcHHHHHHHHHHHHhcCHH
Confidence 44666888899843 22356677666554 489999999842 12222333345555555555432
Q ss_pred ---CCCCcEEEEEechhHHHHHHHHhc---cCCCCCceeEEEEcCCC
Q 015401 183 ---YPKAHLYAVGWSLGANILIRYLGH---ESHSCPLSGAVSLCNPF 223 (407)
Q Consensus 183 ---~~~~~v~lvG~S~Gg~ia~~~a~~---~p~~~~v~~~v~l~~p~ 223 (407)
....+|+++|-|.||++.+..+.+ +.-+ .-+|+++.-+|.
T Consensus 463 llG~TgEriv~aGDSAGgNL~~~VaLr~i~~gvR-vPDGl~laY~pt 508 (880)
T KOG4388|consen 463 LLGSTGERIVLAGDSAGGNLCFTVALRAIAYGVR-VPDGLMLAYPPT 508 (880)
T ss_pred HhCcccceEEEeccCCCcceeehhHHHHHHhCCC-CCCceEEecChh
Confidence 124599999999999986554432 2222 035666655543
No 230
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=92.07 E-value=0.44 Score=43.45 Aligned_cols=78 Identities=23% Similarity=0.203 Sum_probs=50.2
Q ss_pred EEEEEeCC-CCCCCCCCCCCcc-c-CCChhHHHHHHHHHHhhCC---CCcEEEEEechhHHHHHHHHhccCC--------
Q 015401 144 RVVVFNSR-GCGDSPVTTPQFY-S-ASFLGDMQEVVAHVGSKYP---KAHLYAVGWSLGANILIRYLGHESH-------- 209 (407)
Q Consensus 144 ~vi~~D~r-G~G~S~~~~~~~~-~-~~~~~Dl~~~l~~l~~~~~---~~~v~lvG~S~Gg~ia~~~a~~~p~-------- 209 (407)
.++-+|.| |.|.|-...+..+ . +..++|+..++...-..+| ..++++.|-|+||..+-.+|.+--+
T Consensus 3 NvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~ 82 (319)
T PLN02213 3 NIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEP 82 (319)
T ss_pred cEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCC
Confidence 68889988 8888843322221 1 2334777777776665555 5699999999999987666653211
Q ss_pred CCCceeEEEEcC
Q 015401 210 SCPLSGAVSLCN 221 (407)
Q Consensus 210 ~~~v~~~v~l~~ 221 (407)
.-.++|+++-++
T Consensus 83 ~inLkGi~IGNg 94 (319)
T PLN02213 83 PINLQGYMLGNP 94 (319)
T ss_pred ceeeeEEEeCCC
Confidence 123677766554
No 231
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=92.05 E-value=0.35 Score=44.13 Aligned_cols=41 Identities=22% Similarity=0.242 Sum_probs=32.5
Q ss_pred CCCcEEEEEechhHHHHHHHHhccCCC---CCceeEEEEcCCCC
Q 015401 184 PKAHLYAVGWSLGANILIRYLGHESHS---CPLSGAVSLCNPFN 224 (407)
Q Consensus 184 ~~~~v~lvG~S~Gg~ia~~~a~~~p~~---~~v~~~v~l~~p~~ 224 (407)
+++|+.|||||+|+.+...++.+..++ .-|..+++++.|..
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~ 261 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVP 261 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCC
Confidence 567999999999999988777655443 23789999998875
No 232
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=90.73 E-value=1.7 Score=35.26 Aligned_cols=39 Identities=18% Similarity=0.409 Sum_probs=33.7
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeC
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNS 150 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~ 150 (407)
.+|.+|.+-|+.|+..+.....+...|.+.|++++++|-
T Consensus 21 ~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDG 59 (197)
T COG0529 21 QKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDG 59 (197)
T ss_pred CCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecC
Confidence 678999999999988876666777788999999999984
No 233
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.70 E-value=1.3 Score=40.36 Aligned_cols=242 Identities=13% Similarity=0.087 Sum_probs=114.5
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCC-CCCcccCCChhHHHHHHHHHHhhCC--CCcE
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVT-TPQFYSASFLGDMQEVVAHVGSKYP--KAHL 188 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~-~~~~~~~~~~~Dl~~~l~~l~~~~~--~~~v 188 (407)
...+||++=||.|... .++........+.||.++-+-.|-+-..-.. .+..+ ..++...+..+...+. ..++
T Consensus 37 s~k~Iv~~~gWag~~~-r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~~s----l~~~~~~l~~L~~~~~~~~~pi 111 (350)
T KOG2521|consen 37 SEKPIVVLLGWAGAID-RNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRILS----LSLASTRLSELLSDYNSDPCPI 111 (350)
T ss_pred ccccEEEEeeeccccc-hhHHHHHHHHhcCCceEEEecCcccccccccccccch----hhHHHHHHHHHhhhccCCcCce
Confidence 3435666667766544 6777777778889999998888755332111 11111 2333344444443332 4588
Q ss_pred EEEEechhHHHHHHHH---hcc--CCC-CCceeEEEEcCCCCHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhhhc
Q 015401 189 YAVGWSLGANILIRYL---GHE--SHS-CPLSGAVSLCNPFNLVIADQDFRKGFNIVYDKALASALCRIFKKHALLFEDM 262 (407)
Q Consensus 189 ~lvG~S~Gg~ia~~~a---~~~--p~~-~~v~~~v~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 262 (407)
++--+|+||...+... ... |.. ..+.+++..+.|.........+...+.......... +..... .....
T Consensus 112 ~fh~FS~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~~~~~~~a~~~~~~~~~~~~~----~~~~~~-~i~~~ 186 (350)
T KOG2521|consen 112 IFHVFSGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSSPVQLGWAVSFSSPPDDYVAR----WARLNY-HITLL 186 (350)
T ss_pred EEEEecCCceeehHHHHHHHhhcCchhHhhcCCceEeccccccchhhhcceeccccCchhhHHH----HHhcCe-EEEEE
Confidence 8889999998765443 111 222 124556766666532111111100000000000000 000000 00000
Q ss_pred CCCCCHHHHhcCCCHHHHhhccccccCCCCCH-HHHHhhCCcchhcCCCccceeeeecCCCCCCCCCCCChh---HHhcC
Q 015401 263 GGEFNIPLAANAKSVRQFDDGLTRVSFGFKSV-DDYYSNSSSSDSIKHVRIPLLCIQAQNDPIAPSRGIPCE---DIKAN 338 (407)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~---~~~~~ 338 (407)
. ..........+...+....++.... -++|. ..-.....+.+.+.+..|.+++.+...+. .....
T Consensus 187 ~------~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~-----~~~~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g 255 (350)
T KOG2521|consen 187 T------MAGNEGGAYLLGPLAEKISMSRKYHFLDRYE-----EQRNELPWNQLYLYSDNDDVLPADEIEKFIALRREKG 255 (350)
T ss_pred E------eeecccchhhhhhhhhccccccchHHHHHHH-----hhhhcccccceeecCCccccccHHHHHHHHHHHHhcC
Confidence 0 0000000000000000000000000 01111 11111245778888999999998866432 22345
Q ss_pred CCeEEEEcCCCCceeecCC-CCCCCCCCCcHHHHHHHHHHHHH
Q 015401 339 PNCLLILTPKGGHLGWVAG-PEAPFGSPWTDPVVMDFLEHLER 380 (407)
Q Consensus 339 ~~~~~~~~~~~gH~~~~~~-p~~~~~~~w~~~~i~~fl~~~~~ 380 (407)
-+++.+-+.++-|..++.. |.. +.+...+|++....
T Consensus 256 ~~v~s~~~~ds~H~~h~r~~p~~------y~~~~~~Fl~~~~~ 292 (350)
T KOG2521|consen 256 VNVKSVKFKDSEHVAHFRSFPKT------YLKKCSEFLRSVIS 292 (350)
T ss_pred ceEEEeeccCccceeeeccCcHH------HHHHHHHHHHhccc
Confidence 5667777788999887664 444 78899999988654
No 234
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=90.65 E-value=2.8 Score=33.25 Aligned_cols=76 Identities=18% Similarity=0.331 Sum_probs=46.9
Q ss_pred cEEEEeCCCCCCCccHHHHHHHHHHHhCCcE-EEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEEE
Q 015401 114 PVLILMPGLTGGSEDSYVRHMLLRARSKGWR-VVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVG 192 (407)
Q Consensus 114 p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~-vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG 192 (407)
-.||+.-||+. .. +-+.++ .+..++. ++++|++.... .+. ..+ .+.+.+|+
T Consensus 12 ~LIvyFaGwgt-pp-s~v~HL---ilpeN~dl~lcYDY~dl~l------dfD-------fsA----------y~hirlvA 63 (214)
T COG2830 12 HLIVYFAGWGT-PP-SAVNHL---ILPENHDLLLCYDYQDLNL------DFD-------FSA----------YRHIRLVA 63 (214)
T ss_pred EEEEEEecCCC-CH-HHHhhc---cCCCCCcEEEEeehhhcCc------ccc-------hhh----------hhhhhhhh
Confidence 37888888854 33 223443 3445555 57889874321 111 110 12677999
Q ss_pred echhHHHHHHHHhccCCCCCceeEEEEcC
Q 015401 193 WSLGANILIRYLGHESHSCPLSGAVSLCN 221 (407)
Q Consensus 193 ~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~ 221 (407)
+|||-.+|-+++...+ ++..+.+.+
T Consensus 64 wSMGVwvAeR~lqg~~----lksatAiNG 88 (214)
T COG2830 64 WSMGVWVAERVLQGIR----LKSATAING 88 (214)
T ss_pred hhHHHHHHHHHHhhcc----ccceeeecC
Confidence 9999999999887776 566666654
No 235
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=90.20 E-value=1.8 Score=37.14 Aligned_cols=81 Identities=16% Similarity=0.092 Sum_probs=45.4
Q ss_pred CcEEEEEeCCCC-CCCCCCCCCccc-CCChhHHHHHHHHHHhhC-CCCcEEEEEechhHHHHHHHHhccCCC----CCce
Q 015401 142 GWRVVVFNSRGC-GDSPVTTPQFYS-ASFLGDMQEVVAHVGSKY-PKAHLYAVGWSLGANILIRYLGHESHS----CPLS 214 (407)
Q Consensus 142 g~~vi~~D~rG~-G~S~~~~~~~~~-~~~~~Dl~~~l~~l~~~~-~~~~v~lvG~S~Gg~ia~~~a~~~p~~----~~v~ 214 (407)
|+.+..+++|.. +--.. ....+. +...+-+..+.+.+.... ...+++++|+|.|+.++...+.+.-.. ....
T Consensus 2 ~~~~~~V~YPa~f~P~~g-~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l 80 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTG-IGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDL 80 (225)
T ss_pred CcceEEecCCchhcCcCC-CCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCce
Confidence 677888888861 11000 111112 222333344444444421 456899999999999998877654221 1144
Q ss_pred eEEEEcCCC
Q 015401 215 GAVSLCNPF 223 (407)
Q Consensus 215 ~~v~l~~p~ 223 (407)
..|+++.|.
T Consensus 81 ~fVl~gnP~ 89 (225)
T PF08237_consen 81 SFVLIGNPR 89 (225)
T ss_pred EEEEecCCC
Confidence 677787764
No 236
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=89.79 E-value=0.27 Score=40.34 Aligned_cols=64 Identities=22% Similarity=0.308 Sum_probs=45.7
Q ss_pred ccceeeeecCCCCCCCCCCC--ChhHHhcCCC--eEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHH
Q 015401 311 RIPLLCIQAQNDPIAPSRGI--PCEDIKANPN--CLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEH 377 (407)
Q Consensus 311 ~~Pvlii~g~~D~~~~~~~~--~~~~~~~~~~--~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~ 377 (407)
++++|-|-|+.|.|+.+... ...++...|. ...++.+++||++.+.++.. +.-+...|.+|+.+
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rw---r~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRW---REEIYPRIREFIRQ 201 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhh---hhhhhHHHHHHHHh
Confidence 47888899999999988643 1355555553 35667889999999988753 12256778888764
No 237
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=88.21 E-value=0.72 Score=34.61 Aligned_cols=35 Identities=17% Similarity=0.289 Sum_probs=17.6
Q ss_pred EcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCcc
Q 015401 90 RTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSED 128 (407)
Q Consensus 90 ~~~dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~ 128 (407)
+.-+|-.+.+-...+. .++..+|||+||++|+-.+
T Consensus 73 t~I~g~~iHFih~rs~----~~~aiPLll~HGWPgSf~E 107 (112)
T PF06441_consen 73 TEIDGLDIHFIHVRSK----RPNAIPLLLLHGWPGSFLE 107 (112)
T ss_dssp EEETTEEEEEEEE--S-----TT-EEEEEE--SS--GGG
T ss_pred EEEeeEEEEEEEeeCC----CCCCeEEEEECCCCccHHh
Confidence 3335666655544443 2477899999999997654
No 238
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=87.12 E-value=2.7 Score=39.85 Aligned_cols=116 Identities=16% Similarity=0.255 Sum_probs=63.0
Q ss_pred CCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEE-EeCCCCCCCCCCCCCcccCCChh
Q 015401 92 KDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVV-FNSRGCGDSPVTTPQFYSASFLG 170 (407)
Q Consensus 92 ~dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~-~D~rG~G~S~~~~~~~~~~~~~~ 170 (407)
+.+..+.+.+-+++- ..|..|..-|+-. .+.+ .. ...+.+-|...+. -|.|=-|++=-....-+-....+
T Consensus 273 ~~reEi~yYFnPGD~-----KPPL~VYFSGyR~--aEGF-Eg-y~MMk~Lg~PfLL~~DpRleGGaFYlGs~eyE~~I~~ 343 (511)
T TIGR03712 273 SKRQEFIYYFNPGDF-----KPPLNVYFSGYRP--AEGF-EG-YFMMKRLGAPFLLIGDPRLEGGAFYLGSDEYEQGIIN 343 (511)
T ss_pred CCCCeeEEecCCcCC-----CCCeEEeeccCcc--cCcc-hh-HHHHHhcCCCeEEeeccccccceeeeCcHHHHHHHHH
Confidence 345555555444442 5678899999754 2222 11 1123344655544 47876665521111111112233
Q ss_pred HHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEEEcCCC
Q 015401 171 DMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVSLCNPF 223 (407)
Q Consensus 171 Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~l~~p~ 223 (407)
-+.+.++.|+ +....++|-|-|||..-|+.|++.... .+|+++-|.
T Consensus 344 ~I~~~L~~Lg--F~~~qLILSGlSMGTfgAlYYga~l~P-----~AIiVgKPL 389 (511)
T TIGR03712 344 VIQEKLDYLG--FDHDQLILSGLSMGTFGALYYGAKLSP-----HAIIVGKPL 389 (511)
T ss_pred HHHHHHHHhC--CCHHHeeeccccccchhhhhhcccCCC-----ceEEEcCcc
Confidence 3344444444 234589999999999999999987643 345555443
No 239
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=85.35 E-value=1.7 Score=33.29 Aligned_cols=32 Identities=22% Similarity=0.491 Sum_probs=23.2
Q ss_pred CCCcEEEEeCCCCCCCccHHHHH-HHHHHHhCCc
Q 015401 111 PDSPVLILMPGLTGGSEDSYVRH-MLLRARSKGW 143 (407)
Q Consensus 111 ~~~p~vv~lHG~~g~~~~~~~~~-~~~~l~~~g~ 143 (407)
+.+|.|+-+||++|... +|+.. ++..+...|.
T Consensus 50 p~KpLVlSfHG~tGtGK-n~v~~liA~~ly~~G~ 82 (127)
T PF06309_consen 50 PRKPLVLSFHGWTGTGK-NFVSRLIAEHLYKSGM 82 (127)
T ss_pred CCCCEEEEeecCCCCcH-HHHHHHHHHHHHhccc
Confidence 47899999999999887 55444 4555666653
No 240
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=85.06 E-value=3 Score=37.93 Aligned_cols=63 Identities=14% Similarity=0.122 Sum_probs=43.9
Q ss_pred CCCccceeeeecCCCCCCCCCCCChhHHhcCCCe-EEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHHHHH
Q 015401 308 KHVRIPLLCIQAQNDPIAPSRGIPCEDIKANPNC-LLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEHLER 380 (407)
Q Consensus 308 ~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~~~~ 380 (407)
.++.+|-.|++|..|.+..+++. ...-...|+. .+..+|+..|...-. . +.+.+.-|++++..
T Consensus 326 ~RLalpKyivnaSgDdff~pDsa-~lYyd~LPG~kaLrmvPN~~H~~~n~---~------i~esl~~flnrfq~ 389 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPDSA-NLYYDDLPGEKALRMVPNDPHNLINQ---F------IKESLEPFLNRFQM 389 (507)
T ss_pred hhccccceeecccCCcccCCCcc-ceeeccCCCceeeeeCCCCcchhhHH---H------HHHHHHHHHHHHhc
Confidence 56678999999999988888876 3445566654 577889999953211 1 45667777777654
No 241
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=84.63 E-value=7.5 Score=34.64 Aligned_cols=94 Identities=15% Similarity=0.297 Sum_probs=54.6
Q ss_pred cEEEEeCCCCCCCcc----HHHHHHHHHH-HhCCcEEEEEeCCCCCCC--------CCC----CCCcccCCChhHHHHHH
Q 015401 114 PVLILMPGLTGGSED----SYVRHMLLRA-RSKGWRVVVFNSRGCGDS--------PVT----TPQFYSASFLGDMQEVV 176 (407)
Q Consensus 114 p~vv~lHG~~g~~~~----~~~~~~~~~l-~~~g~~vi~~D~rG~G~S--------~~~----~~~~~~~~~~~Dl~~~l 176 (407)
..|||+=|-..+... .-+..+...+ ...+-..+++=.+|.|.. ... .....-....+.+....
T Consensus 2 ~iv~~fDGT~n~~~~~~~~TNV~rL~~~~~~~~~~~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~ay 81 (277)
T PF09994_consen 2 RIVVFFDGTGNNPDNDPPPTNVARLYDAYKDRDGERQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDAY 81 (277)
T ss_pred cEEEEecCCCCCCCCCccccHHHHHHHHhhccCCCceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHHH
Confidence 456677764332221 1134444444 223335556667788771 110 01111234566777777
Q ss_pred HHHHhhC-CCCcEEEEEechhHHHHHHHHhcc
Q 015401 177 AHVGSKY-PKAHLYAVGWSLGANILIRYLGHE 207 (407)
Q Consensus 177 ~~l~~~~-~~~~v~lvG~S~Gg~ia~~~a~~~ 207 (407)
..+...+ +...|+++|+|-|+.+|-.++..-
T Consensus 82 ~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 82 RFLSKNYEPGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred HHHHhccCCcceEEEEecCccHHHHHHHHHHH
Confidence 7776655 456899999999999998888654
No 242
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=84.27 E-value=9.2 Score=34.22 Aligned_cols=96 Identities=17% Similarity=0.275 Sum_probs=59.0
Q ss_pred CCCcEEEEeCCCC----CCCccHHHHHHHHHHHh-CCcEEEEEeCCCCCCCCCCC------------CC-cccCCChhHH
Q 015401 111 PDSPVLILMPGLT----GGSEDSYVRHMLLRARS-KGWRVVVFNSRGCGDSPVTT------------PQ-FYSASFLGDM 172 (407)
Q Consensus 111 ~~~p~vv~lHG~~----g~~~~~~~~~~~~~l~~-~g~~vi~~D~rG~G~S~~~~------------~~-~~~~~~~~Dl 172 (407)
..+..|+++-|-. ...-.+ +-.+...+.. .+-+++++--+|.|.-.... .+ ..-..+.+.+
T Consensus 29 s~k~lV~CfDGT~nrfg~qp~TN-Vv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI 107 (423)
T COG3673 29 SMKRLVFCFDGTWNRFGAQPPTN-VVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNI 107 (423)
T ss_pred CcceEEEEecCchhhcCCCCcch-HHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHH
Confidence 3567788888832 111112 2233333433 67888888888887542110 00 1112345666
Q ss_pred HHHHHHHHhhC-CCCcEEEEEechhHHHHHHHHhcc
Q 015401 173 QEVVAHVGSKY-PKAHLYAVGWSLGANILIRYLGHE 207 (407)
Q Consensus 173 ~~~l~~l~~~~-~~~~v~lvG~S~Gg~ia~~~a~~~ 207 (407)
..+...|...| |+..|+++|+|-|+.++--+|+.-
T Consensus 108 ~~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagmi 143 (423)
T COG3673 108 REAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGMI 143 (423)
T ss_pred HHHHHHHHHhcCCCCeEEEeeccchhHHHHHHHHHH
Confidence 77777777766 567999999999999998777653
No 243
>PF03283 PAE: Pectinacetylesterase
Probab=82.94 E-value=3.7 Score=38.07 Aligned_cols=36 Identities=19% Similarity=0.161 Sum_probs=27.9
Q ss_pred hhHHHHHHHHHHhh-CC-CCcEEEEEechhHHHHHHHH
Q 015401 169 LGDMQEVVAHVGSK-YP-KAHLYAVGWSLGANILIRYL 204 (407)
Q Consensus 169 ~~Dl~~~l~~l~~~-~~-~~~v~lvG~S~Gg~ia~~~a 204 (407)
..-+.+++++|..+ ++ .++++|.|.|.||.-++..+
T Consensus 137 ~~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~ 174 (361)
T PF03283_consen 137 YRILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHA 174 (361)
T ss_pred HHHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHH
Confidence 34678888888876 44 35899999999999887654
No 244
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=79.46 E-value=3.7 Score=39.01 Aligned_cols=43 Identities=19% Similarity=0.261 Sum_probs=32.2
Q ss_pred CCCCcEEEEEechhHHHHHHHHhccCC---CCCceeEEEEcCCCCH
Q 015401 183 YPKAHLYAVGWSLGANILIRYLGHESH---SCPLSGAVSLCNPFNL 225 (407)
Q Consensus 183 ~~~~~v~lvG~S~Gg~ia~~~a~~~p~---~~~v~~~v~l~~p~~~ 225 (407)
.+.+||.+||+|+|+-+...++.+..+ ..-|..++++++|...
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~ 489 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPT 489 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccC
Confidence 356799999999999998877653322 2338889999998753
No 245
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=78.83 E-value=2.2 Score=41.29 Aligned_cols=54 Identities=15% Similarity=0.216 Sum_probs=35.8
Q ss_pred hHHHHHHHHHHhh-CC-CCcEEEEEechhHHHHHHHHhc-----cCCC----CCceeEEEEcCCC
Q 015401 170 GDMQEVVAHVGSK-YP-KAHLYAVGWSLGANILIRYLGH-----ESHS----CPLSGAVSLCNPF 223 (407)
Q Consensus 170 ~Dl~~~l~~l~~~-~~-~~~v~lvG~S~Gg~ia~~~a~~-----~p~~----~~v~~~v~l~~p~ 223 (407)
.-..++++.+.+. .+ +++++.+||||||.++=.++.. .|+- ....++|.++.|-
T Consensus 508 ~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PH 572 (697)
T KOG2029|consen 508 ARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPH 572 (697)
T ss_pred HHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCC
Confidence 3345666666553 23 6799999999999887655432 3331 2367888888874
No 246
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=77.46 E-value=5.1 Score=32.10 Aligned_cols=39 Identities=21% Similarity=0.434 Sum_probs=31.4
Q ss_pred CcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCC
Q 015401 113 SPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSR 151 (407)
Q Consensus 113 ~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~r 151 (407)
+|.||++-|+.|+..+..-..+...|.+.|+.|+.+|-.
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDgD 39 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDGD 39 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecCc
Confidence 478999999999888777677778888999999999854
No 247
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=76.93 E-value=26 Score=25.66 Aligned_cols=82 Identities=11% Similarity=0.081 Sum_probs=53.1
Q ss_pred HHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEEEechhHH--HHHHHHhccCC
Q 015401 132 RHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGAN--ILIRYLGHESH 209 (407)
Q Consensus 132 ~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~--ia~~~a~~~p~ 209 (407)
..+...+...||-.-.+.++..|.+-... ......+-=...++.+...+|+.++++||-|--.= +-..+|.++|+
T Consensus 14 ~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~---~~~~~~~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P~ 90 (100)
T PF09949_consen 14 PFLRDFLRRNGFPAGPLLLRDYGPSLSGL---FKSGAEEHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFPG 90 (100)
T ss_pred HHHHHHHHhcCCCCCceEcccCCcccccc---ccCCchhHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCCC
Confidence 45555566678888888888876552111 11111123356777788889999999999885442 33456788999
Q ss_pred CCCceeEEE
Q 015401 210 SCPLSGAVS 218 (407)
Q Consensus 210 ~~~v~~~v~ 218 (407)
+ |.++.+
T Consensus 91 ~--i~ai~I 97 (100)
T PF09949_consen 91 R--ILAIYI 97 (100)
T ss_pred C--EEEEEE
Confidence 8 877654
No 248
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=75.84 E-value=4.1 Score=39.42 Aligned_cols=88 Identities=16% Similarity=0.155 Sum_probs=57.8
Q ss_pred HHHHhCCcEEEEEeCCCCCCCCCC---CCCcccC---CC----hhHHHHHHHHHHhhC---CCCcEEEEEechhHHHHHH
Q 015401 136 LRARSKGWRVVVFNSRGCGDSPVT---TPQFYSA---SF----LGDMQEVVAHVGSKY---PKAHLYAVGWSLGANILIR 202 (407)
Q Consensus 136 ~~l~~~g~~vi~~D~rG~G~S~~~---~~~~~~~---~~----~~Dl~~~l~~l~~~~---~~~~v~lvG~S~Gg~ia~~ 202 (407)
...+.+||.++.-|- ||..+... ......+ +| ..+...+-+.+.+.| +.+.-+..|-|.||.-++.
T Consensus 53 ~~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~ 131 (474)
T PF07519_consen 53 ATALARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLM 131 (474)
T ss_pred chhhhcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHH
Confidence 345688999999995 66655321 1111111 11 223333333333332 3457899999999999999
Q ss_pred HHhccCCCCCceeEEEEcCCCCHH
Q 015401 203 YLGHESHSCPLSGAVSLCNPFNLV 226 (407)
Q Consensus 203 ~a~~~p~~~~v~~~v~l~~p~~~~ 226 (407)
.|.++|+. ++++|.-+|.++..
T Consensus 132 ~AQryP~d--fDGIlAgaPA~~~~ 153 (474)
T PF07519_consen 132 AAQRYPED--FDGILAGAPAINWT 153 (474)
T ss_pred HHHhChhh--cCeEEeCCchHHHH
Confidence 99999999 99999998877543
No 249
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=71.62 E-value=27 Score=29.37 Aligned_cols=56 Identities=16% Similarity=0.194 Sum_probs=37.3
Q ss_pred CCCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCc-EEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhh
Q 015401 110 PPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGW-RVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSK 182 (407)
Q Consensus 110 ~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~-~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~ 182 (407)
..+.-+|++.||....+...| ..+-.-+.+.|| .|++...-|+- ++..+++.++..
T Consensus 135 ~k~e~~vlmgHGt~h~s~~~Y-acLd~~~~~~~f~~v~v~~ve~yP----------------~~d~vi~~l~~~ 191 (265)
T COG4822 135 NKDEILVLMGHGTDHHSNAAY-ACLDHVLDEYGFDNVFVAAVEGYP----------------LVDTVIEYLRKN 191 (265)
T ss_pred CcCeEEEEEecCCCccHHHHH-HHHHHHHHhcCCCceEEEEecCCC----------------cHHHHHHHHHHc
Confidence 356788999999876666444 455555778898 67776665541 255667777764
No 250
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=71.19 E-value=4.1 Score=37.15 Aligned_cols=59 Identities=17% Similarity=0.114 Sum_probs=40.0
Q ss_pred ccceeeeecCCCCCCCCCCCChhHH-----------------------hcCCC-eEEEEcCCCCceeecCCCCCCCCCCC
Q 015401 311 RIPLLCIQAQNDPIAPSRGIPCEDI-----------------------KANPN-CLLILTPKGGHLGWVAGPEAPFGSPW 366 (407)
Q Consensus 311 ~~Pvlii~g~~D~~~~~~~~~~~~~-----------------------~~~~~-~~~~~~~~~gH~~~~~~p~~~~~~~w 366 (407)
.++|||.+|..|.+|+.-.....+. +...+ ..++.+.++||+.. .+|+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~------ 305 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNE------ 305 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHH------
Confidence 4799999999998887643211110 11122 67778889999985 57876
Q ss_pred cHHHHHHHHH
Q 015401 367 TDPVVMDFLE 376 (407)
Q Consensus 367 ~~~~i~~fl~ 376 (407)
..+.+..|+.
T Consensus 306 al~m~~~fi~ 315 (319)
T PLN02213 306 TFIMFQRWIS 315 (319)
T ss_pred HHHHHHHHHc
Confidence 6777777774
No 251
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=67.11 E-value=2.1 Score=40.64 Aligned_cols=60 Identities=23% Similarity=0.191 Sum_probs=39.6
Q ss_pred ccceeeeecCCCCCCCCCCCChhH-------------------------HhcCCCeEEEEcCCCCceeecCCCCCCCCCC
Q 015401 311 RIPLLCIQAQNDPIAPSRGIPCED-------------------------IKANPNCLLILTPKGGHLGWVAGPEAPFGSP 365 (407)
Q Consensus 311 ~~Pvlii~g~~D~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~ 365 (407)
.++||+.+|..|.+++.-.....+ .+...+..++.+.++||+...++|+.
T Consensus 330 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~dqP~~----- 404 (415)
T PF00450_consen 330 GIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQDQPEA----- 404 (415)
T ss_dssp T-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHHSHHH-----
T ss_pred cceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhhCHHH-----
Confidence 389999999999998843221110 11224567889999999999999987
Q ss_pred CcHHHHHHHHH
Q 015401 366 WTDPVVMDFLE 376 (407)
Q Consensus 366 w~~~~i~~fl~ 376 (407)
..+.+.+|++
T Consensus 405 -a~~m~~~fl~ 414 (415)
T PF00450_consen 405 -ALQMFRRFLK 414 (415)
T ss_dssp -HHHHHHHHHC
T ss_pred -HHHHHHHHhc
Confidence 7788888874
No 252
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=65.80 E-value=15 Score=28.88 Aligned_cols=44 Identities=16% Similarity=0.416 Sum_probs=32.0
Q ss_pred EEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCC
Q 015401 115 VLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPV 158 (407)
Q Consensus 115 ~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~ 158 (407)
++|.+-|..++........++..+.++||+|.++=.-+||....
T Consensus 1 pvv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~~~ 44 (140)
T PF03205_consen 1 PVVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHGQFEI 44 (140)
T ss_dssp -EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STTSTTC
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCCCccc
Confidence 36777787777777888999999999999999776677776653
No 253
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=65.65 E-value=8.9 Score=33.73 Aligned_cols=40 Identities=18% Similarity=0.475 Sum_probs=34.8
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCC
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSR 151 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~r 151 (407)
..|+||++.|+-++....-++.+...+-.+|++|.++.-|
T Consensus 54 ~~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~P 93 (264)
T TIGR03709 54 RRSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAP 93 (264)
T ss_pred CCcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCC
Confidence 4699999999998888888899998898999999999554
No 254
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=65.21 E-value=9 Score=32.93 Aligned_cols=40 Identities=18% Similarity=0.339 Sum_probs=34.9
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCC
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSR 151 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~r 151 (407)
+.|+||++.|+-++....-++.+...+-.+|++|.++.-|
T Consensus 29 ~~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~p 68 (230)
T TIGR03707 29 GARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKP 68 (230)
T ss_pred CCCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCC
Confidence 4699999999998888788888888888999999998765
No 255
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=59.71 E-value=16 Score=35.35 Aligned_cols=63 Identities=22% Similarity=0.306 Sum_probs=41.7
Q ss_pred ccceeeeecCCCCCCCCCCCCh---hHHhcC--------CCeEEEEcCCCCceeecCCCCCCCCCCCcHHHHHHHHHH
Q 015401 311 RIPLLCIQAQNDPIAPSRGIPC---EDIKAN--------PNCLLILTPKGGHLGWVAGPEAPFGSPWTDPVVMDFLEH 377 (407)
Q Consensus 311 ~~Pvlii~g~~D~~~~~~~~~~---~~~~~~--------~~~~~~~~~~~gH~~~~~~p~~~~~~~w~~~~i~~fl~~ 377 (407)
.-.+++.||..|+++++..... .+.+.. ...++..+|+.+|+.--..+.... ....|.+|+++
T Consensus 353 GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d----~l~aL~~WVE~ 426 (474)
T PF07519_consen 353 GGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFD----ALTALVDWVEN 426 (474)
T ss_pred CCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCC----HHHHHHHHHhC
Confidence 4689999999999999986532 222222 346899999999997654443311 44556666653
No 256
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=59.35 E-value=67 Score=28.50 Aligned_cols=88 Identities=18% Similarity=0.119 Sum_probs=47.5
Q ss_pred HHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcc---cCCChhHHHHHHHHHHhh---CC---CCcEEEEEechhHHHHHH
Q 015401 132 RHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFY---SASFLGDMQEVVAHVGSK---YP---KAHLYAVGWSLGANILIR 202 (407)
Q Consensus 132 ~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~---~~~~~~Dl~~~l~~l~~~---~~---~~~v~lvG~S~Gg~ia~~ 202 (407)
-.-++.+..-...++++-+ |-.++.--+ -+.-.+...++++.+... .| ..++++.|-|+|++-+..
T Consensus 51 ~~a~E~l~~GD~A~va~QY-----SylPSw~sfl~dr~~a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~ 125 (289)
T PF10081_consen 51 VDALEYLYGGDVAIVAMQY-----SYLPSWLSFLVDRDAAREAARALFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEA 125 (289)
T ss_pred HhHHHHHhCCCeEEEEecc-----ccccchHHHhcccchHHHHHHHHHHHHHHHHHhCCcccCCeEEEeccCccccchhh
Confidence 3344455555566666654 222211111 111223334555555432 23 238999999999987665
Q ss_pred HHhccCCC-CCceeEEEEcCCCC
Q 015401 203 YLGHESHS-CPLSGAVSLCNPFN 224 (407)
Q Consensus 203 ~a~~~p~~-~~v~~~v~l~~p~~ 224 (407)
......+. ..+++++..++|..
T Consensus 126 af~~~~~~~~~vdGalw~GpP~~ 148 (289)
T PF10081_consen 126 AFDGLDDLRDRVDGALWVGPPFF 148 (289)
T ss_pred hhccHHHhhhhcceEEEeCCCCC
Confidence 44332221 23999999998874
No 257
>PF01580 FtsK_SpoIIIE: FtsK/SpoIIIE family; InterPro: IPR002543 The FtsK/SpoIIIE domain is found extensively in a wide variety of proteins from prokaryotes and plasmids [] some of which contain up to three copies.The domain contains a putative ATP binding P-loop motif. A mutation in FtsK causes a temperature sensitive block in cell division and it is involved in peptidoglycan synthesis or modification []. The SpoIIIE protein is implicated in intercellular chromosomal DNA transfer []. ; GO: 0000166 nucleotide binding, 0003677 DNA binding, 0005524 ATP binding, 0007049 cell cycle, 0007059 chromosome segregation, 0051301 cell division, 0016021 integral to membrane; PDB: 2IUS_E 2IUU_A 2IUT_A.
Probab=59.16 E-value=44 Score=27.99 Aligned_cols=64 Identities=17% Similarity=0.369 Sum_probs=37.5
Q ss_pred EEeCCCCCCCccHHHHHHHHHHHh----CCcEEEEEeCCCCCCCCCCC-CC-c--ccCCChhHHHHHHHHHH
Q 015401 117 ILMPGLTGGSEDSYVRHMLLRARS----KGWRVVVFNSRGCGDSPVTT-PQ-F--YSASFLGDMQEVVAHVG 180 (407)
Q Consensus 117 v~lHG~~g~~~~~~~~~~~~~l~~----~g~~vi~~D~rG~G~S~~~~-~~-~--~~~~~~~Dl~~~l~~l~ 180 (407)
+++-|.+|+..+.++..++..++. .+.+++++|..|.+...... +. . ......+++..+++++.
T Consensus 41 ~li~G~tgsGKS~~l~~ll~~l~~~~~p~~~~l~iiD~k~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 112 (205)
T PF01580_consen 41 LLIAGATGSGKSTLLRTLLLSLALTYSPDDVQLYIIDPKGSDLAPLADLPHVAAVAVATDPEEILRLLEELV 112 (205)
T ss_dssp EEEE--TTSSHHHHHHHHHHHHHTT--TTTEEEEEE-TTSSCCGGGTT-TTBSS-S-B-SHHHHHHHHHHHH
T ss_pred EEEEcCCCCCccHHHHHHHHHHHHHhcCCccEEEEEcCCccccchhhhhhhhccccccccHHHHHHHHHHHH
Confidence 556677787887888888888877 68999999999765443211 11 1 12334555555555544
No 258
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=58.94 E-value=25 Score=30.33 Aligned_cols=39 Identities=15% Similarity=0.090 Sum_probs=28.4
Q ss_pred CcEEEEeCCCCCC-CccHHHHHHHHHHHhCCcEEEEEeCC
Q 015401 113 SPVLILMPGLTGG-SEDSYVRHMLLRARSKGWRVVVFNSR 151 (407)
Q Consensus 113 ~p~vv~lHG~~g~-~~~~~~~~~~~~l~~~g~~vi~~D~r 151 (407)
+|.|+||+-.... ..+.|.......+.+.|+.+..++..
T Consensus 31 ~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~ 70 (233)
T PRK05282 31 RRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRV 70 (233)
T ss_pred CCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccc
Confidence 5678888876432 34467777777788889998888765
No 259
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=58.80 E-value=12 Score=35.74 Aligned_cols=61 Identities=18% Similarity=0.150 Sum_probs=43.0
Q ss_pred ccceeeeecCCCCCCCCCCCChhH---------------H---------hcCCCeEEEEcCCCCceeecCCCCCCCCCCC
Q 015401 311 RIPLLCIQAQNDPIAPSRGIPCED---------------I---------KANPNCLLILTPKGGHLGWVAGPEAPFGSPW 366 (407)
Q Consensus 311 ~~Pvlii~g~~D~~~~~~~~~~~~---------------~---------~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~w 366 (407)
..+++|..|+.|-++|.-.....+ . +...+..++.+.++||+..+++|+.
T Consensus 363 ~~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~------ 436 (454)
T KOG1282|consen 363 GYRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPES------ 436 (454)
T ss_pred ceEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHH------
Confidence 379999999999999875432111 1 0122345678889999999999986
Q ss_pred cHHHHHHHHHH
Q 015401 367 TDPVVMDFLEH 377 (407)
Q Consensus 367 ~~~~i~~fl~~ 377 (407)
....+..|+..
T Consensus 437 al~m~~~fl~g 447 (454)
T KOG1282|consen 437 ALIMFQRFLNG 447 (454)
T ss_pred HHHHHHHHHcC
Confidence 56777777753
No 260
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=57.12 E-value=12 Score=35.74 Aligned_cols=59 Identities=15% Similarity=0.097 Sum_probs=40.9
Q ss_pred ccceeeeecCCCCCCCCCCCChhHH-----------------------hcCC-CeEEEEcCCCCceeecCCCCCCCCCCC
Q 015401 311 RIPLLCIQAQNDPIAPSRGIPCEDI-----------------------KANP-NCLLILTPKGGHLGWVAGPEAPFGSPW 366 (407)
Q Consensus 311 ~~Pvlii~g~~D~~~~~~~~~~~~~-----------------------~~~~-~~~~~~~~~~gH~~~~~~p~~~~~~~w 366 (407)
.++||+..|..|-+++.-.....+. +... +..++.+.++||+.. .+|+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~------ 419 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNE------ 419 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHH------
Confidence 4799999999999887653211110 1122 267788889999985 57876
Q ss_pred cHHHHHHHHH
Q 015401 367 TDPVVMDFLE 376 (407)
Q Consensus 367 ~~~~i~~fl~ 376 (407)
..+.+..|+.
T Consensus 420 al~m~~~Fi~ 429 (433)
T PLN03016 420 TFIMFQRWIS 429 (433)
T ss_pred HHHHHHHHHc
Confidence 7777888874
No 261
>PRK03846 adenylylsulfate kinase; Provisional
Probab=56.70 E-value=62 Score=27.01 Aligned_cols=39 Identities=13% Similarity=0.267 Sum_probs=29.5
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeC
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNS 150 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~ 150 (407)
.+|.+|.+.|..|+..+.....+...+...|+.++.+|-
T Consensus 22 ~~~~~i~i~G~~GsGKSTla~~l~~~l~~~~~~~~~ld~ 60 (198)
T PRK03846 22 HKGVVLWFTGLSGSGKSTVAGALEEALHELGVSTYLLDG 60 (198)
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHhCCCCEEEEcC
Confidence 567899999998888766666666667677887888863
No 262
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=56.16 E-value=5.5 Score=34.24 Aligned_cols=40 Identities=25% Similarity=0.494 Sum_probs=31.4
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCC
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSR 151 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~r 151 (407)
..|+||++.|+-++....-+..+...+-.+|++|.++.-|
T Consensus 29 ~~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~p 68 (228)
T PF03976_consen 29 GIPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKP 68 (228)
T ss_dssp HHEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS-
T ss_pred CCcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCC
Confidence 4579999999998887777777777788899999999876
No 263
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=56.01 E-value=20 Score=32.03 Aligned_cols=31 Identities=26% Similarity=0.520 Sum_probs=22.0
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHH-HHHHHhCC
Q 015401 111 PDSPVLILMPGLTGGSEDSYVRHM-LLRARSKG 142 (407)
Q Consensus 111 ~~~p~vv~lHG~~g~~~~~~~~~~-~~~l~~~g 142 (407)
+.+|.++-+||++|... +|+..+ +..+...|
T Consensus 107 p~KPLvLSfHG~tGTGK-N~Va~iiA~n~~~~G 138 (344)
T KOG2170|consen 107 PRKPLVLSFHGWTGTGK-NYVAEIIAENLYRGG 138 (344)
T ss_pred CCCCeEEEecCCCCCch-hHHHHHHHHHHHhcc
Confidence 48999999999999877 555444 44454444
No 264
>PLN02209 serine carboxypeptidase
Probab=55.25 E-value=13 Score=35.52 Aligned_cols=59 Identities=15% Similarity=0.159 Sum_probs=41.1
Q ss_pred ccceeeeecCCCCCCCCCCCChhH-----------------------HhcCCC-eEEEEcCCCCceeecCCCCCCCCCCC
Q 015401 311 RIPLLCIQAQNDPIAPSRGIPCED-----------------------IKANPN-CLLILTPKGGHLGWVAGPEAPFGSPW 366 (407)
Q Consensus 311 ~~Pvlii~g~~D~~~~~~~~~~~~-----------------------~~~~~~-~~~~~~~~~gH~~~~~~p~~~~~~~w 366 (407)
.+++|+..|..|-+|+.-...... .+...+ ..++.+.++||+.. .+|+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~------ 423 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEE------ 423 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHH------
Confidence 479999999999998864321111 112233 67788889999985 58876
Q ss_pred cHHHHHHHHH
Q 015401 367 TDPVVMDFLE 376 (407)
Q Consensus 367 ~~~~i~~fl~ 376 (407)
..+.+.+|+.
T Consensus 424 al~m~~~fi~ 433 (437)
T PLN02209 424 SSIMFQRWIS 433 (437)
T ss_pred HHHHHHHHHc
Confidence 6777777774
No 265
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=54.13 E-value=66 Score=25.89 Aligned_cols=75 Identities=16% Similarity=0.305 Sum_probs=46.9
Q ss_pred cEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEEE
Q 015401 114 PVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVG 192 (407)
Q Consensus 114 p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG 192 (407)
..-+.-.|.+|.........+...+......++++-. |. .+.. .....+.+.+.+..+++.++...|..++++++
T Consensus 23 ~~~v~n~g~~G~t~~~~~~~~~~~~~~~~pd~v~i~~-G~--ND~~-~~~~~~~~~~~~~~l~~~~~~~~p~~~vi~~~ 97 (174)
T cd01841 23 GKTVNNLGIAGISSRQYLEHIEPQLIQKNPSKVFLFL-GT--NDIG-KEVSSNQFIKWYRDIIEQIREEFPNTKIYLLS 97 (174)
T ss_pred CCeEEecccccccHHHHHHHHHHHHHhcCCCEEEEEe-cc--ccCC-CCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEe
Confidence 4456777887766544445554555666677776653 22 2211 11245667888899999998877776777775
No 266
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=53.99 E-value=32 Score=28.26 Aligned_cols=32 Identities=13% Similarity=0.164 Sum_probs=23.4
Q ss_pred cccCCChhHHHHHHHHHHhhCCCCcEEEEEec
Q 015401 163 FYSASFLGDMQEVVAHVGSKYPKAHLYAVGWS 194 (407)
Q Consensus 163 ~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S 194 (407)
.+.+.+.+-+..+++.++...|..||+++-+-
T Consensus 71 ~~~~~~~~~~~~fv~~iR~~hP~tPIllv~~~ 102 (178)
T PF14606_consen 71 MSPEEFRERLDGFVKTIREAHPDTPILLVSPI 102 (178)
T ss_dssp CCTTTHHHHHHHHHHHHHTT-SSS-EEEEE--
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCCCEEEEecC
Confidence 34566788899999999999999999988643
No 267
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=51.45 E-value=19 Score=30.27 Aligned_cols=36 Identities=22% Similarity=0.590 Sum_probs=31.6
Q ss_pred EEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeC
Q 015401 115 VLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNS 150 (407)
Q Consensus 115 ~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~ 150 (407)
++|++-|.+|+....+...++..|.+.+++|+...-
T Consensus 2 pLiIlTGyPgsGKTtfakeLak~L~~~i~~vi~l~k 37 (261)
T COG4088 2 PLIILTGYPGSGKTTFAKELAKELRQEIWRVIHLEK 37 (261)
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHhhhhccccch
Confidence 478999999999888889999999999999988755
No 268
>PRK00889 adenylylsulfate kinase; Provisional
Probab=51.15 E-value=36 Score=27.68 Aligned_cols=38 Identities=24% Similarity=0.476 Sum_probs=30.0
Q ss_pred CcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeC
Q 015401 113 SPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNS 150 (407)
Q Consensus 113 ~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~ 150 (407)
++.+|.+.|+.|+..+.....+...+...|+.++.+|.
T Consensus 3 ~g~~i~~~G~~GsGKST~a~~la~~l~~~g~~v~~id~ 40 (175)
T PRK00889 3 RGVTVWFTGLSGAGKTTIARALAEKLREAGYPVEVLDG 40 (175)
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEcC
Confidence 45588899999988877777777777778888887864
No 269
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=51.11 E-value=20 Score=32.21 Aligned_cols=96 Identities=17% Similarity=0.214 Sum_probs=60.2
Q ss_pred CCCcEEEEeCCCCCCCccHH--HHHHHHH----------HHhCCcEEEEEeCC-CCCCCCCCCCCccc---CCChhHHHH
Q 015401 111 PDSPVLILMPGLTGGSEDSY--VRHMLLR----------ARSKGWRVVVFNSR-GCGDSPVTTPQFYS---ASFLGDMQE 174 (407)
Q Consensus 111 ~~~p~vv~lHG~~g~~~~~~--~~~~~~~----------l~~~g~~vi~~D~r-G~G~S~~~~~~~~~---~~~~~Dl~~ 174 (407)
..+|..+.+.|.+|.+...| +..+-.. .+ +.-.++.+|.| |.|.|=......|. ...+.|+.+
T Consensus 29 s~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWl-k~adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~ 107 (414)
T KOG1283|consen 29 SERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWL-KDADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVE 107 (414)
T ss_pred cCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhh-hhccEEEecCCCcCceeeecCcccccccHHHHHHHHHH
Confidence 46788999999887765433 1111100 01 12467777776 78877433333333 344667777
Q ss_pred HHHHHHhhC---CCCcEEEEEechhHHHHHHHHhcc
Q 015401 175 VVAHVGSKY---PKAHLYAVGWSLGANILIRYLGHE 207 (407)
Q Consensus 175 ~l~~l~~~~---~~~~v~lvG~S~Gg~ia~~~a~~~ 207 (407)
+++.+-... ...|++++.-|+||-++..++.+.
T Consensus 108 llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l 143 (414)
T KOG1283|consen 108 LLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALEL 143 (414)
T ss_pred HHHHHHhcCccccccceEEEEhhcccchhhhhhhhH
Confidence 777665443 356999999999999998776543
No 270
>TIGR00455 apsK adenylylsulfate kinase (apsK). Important residue (active site in E.coli) is residue 100 of the seed alignment.
Probab=50.79 E-value=63 Score=26.51 Aligned_cols=39 Identities=28% Similarity=0.535 Sum_probs=30.4
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeC
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNS 150 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~ 150 (407)
..+.+|.+.|..|+..+.....+...+...|+.++.+|-
T Consensus 16 ~~~~~i~i~G~~GsGKstla~~l~~~l~~~~~~~~~l~~ 54 (184)
T TIGR00455 16 HRGVVIWLTGLSGSGKSTIANALEKKLESKGYRVYVLDG 54 (184)
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEECC
Confidence 567899999999988877767777777677887777763
No 271
>KOG1532 consensus GTPase XAB1, interacts with DNA repair protein XPA [Replication, recombination and repair]
Probab=50.75 E-value=27 Score=30.82 Aligned_cols=39 Identities=23% Similarity=0.436 Sum_probs=33.7
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeC
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNS 150 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~ 150 (407)
.+|++|++=|+.|+....|++.+...+.+++...+++|+
T Consensus 17 ~~p~~ilVvGMAGSGKTTF~QrL~~hl~~~~~ppYviNL 55 (366)
T KOG1532|consen 17 QRPVIILVVGMAGSGKTTFMQRLNSHLHAKKTPPYVINL 55 (366)
T ss_pred cCCcEEEEEecCCCCchhHHHHHHHHHhhccCCCeEEeC
Confidence 678999999999999888999999999888877777776
No 272
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=50.51 E-value=59 Score=26.44 Aligned_cols=53 Identities=17% Similarity=0.292 Sum_probs=41.8
Q ss_pred HHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEEEechh
Q 015401 138 ARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLG 196 (407)
Q Consensus 138 l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~G 196 (407)
|.+.|++.+++|.=++=- ..+......++.+.++.++..++..++.++--|.|
T Consensus 36 Lk~~Gik~li~DkDNTL~------~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaG 88 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLT------PPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAG 88 (168)
T ss_pred hhhcCceEEEEcCCCCCC------CCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCC
Confidence 778999999999976521 12334556789999999999888778999999986
No 273
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=47.62 E-value=92 Score=26.39 Aligned_cols=40 Identities=20% Similarity=0.346 Sum_probs=29.7
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhC-CcEEEEEeCCC
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSK-GWRVVVFNSRG 152 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~-g~~vi~~D~rG 152 (407)
..+.|++++-..+ ..+.|.......+.+. |+.+..++...
T Consensus 30 ~~~~i~~IptAs~-~~~~~~~~~~~a~~~l~G~~~~~~~~~~ 70 (212)
T cd03146 30 ARPKVLFVPTASG-DRDEYTARFYAAFESLRGVEVSHLHLFD 70 (212)
T ss_pred CCCeEEEECCCCC-CHHHHHHHHHHHHhhccCcEEEEEeccC
Confidence 4577888887655 3446777777778888 99999888654
No 274
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=47.05 E-value=45 Score=29.91 Aligned_cols=25 Identities=24% Similarity=0.344 Sum_probs=19.9
Q ss_pred HHHHHHHhCCcEEEEEeCCCCCCCC
Q 015401 133 HMLLRARSKGWRVVVFNSRGCGDSP 157 (407)
Q Consensus 133 ~~~~~l~~~g~~vi~~D~rG~G~S~ 157 (407)
+.+..|++.||.|+++|.--.|...
T Consensus 15 Htv~~Ll~~G~~vvV~DNL~~g~~~ 39 (329)
T COG1087 15 HTVRQLLKTGHEVVVLDNLSNGHKI 39 (329)
T ss_pred HHHHHHHHCCCeEEEEecCCCCCHH
Confidence 4566788899999999998777553
No 275
>PRK07933 thymidylate kinase; Validated
Probab=46.90 E-value=50 Score=28.05 Aligned_cols=41 Identities=20% Similarity=0.341 Sum_probs=34.5
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCC
Q 015401 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDS 156 (407)
Q Consensus 116 vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S 156 (407)
+|.+=|.-|+..+.....+...|..+|+.|+....|++|.+
T Consensus 2 ~IviEG~dGsGKST~~~~L~~~L~~~g~~v~~~~~P~~~~~ 42 (213)
T PRK07933 2 LIAIEGVDGAGKRTLTEALRAALEARGRSVATLAFPRYGRS 42 (213)
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 56777888888877888888899999999999999977754
No 276
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=46.61 E-value=54 Score=26.41 Aligned_cols=46 Identities=15% Similarity=0.329 Sum_probs=27.3
Q ss_pred hhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEE
Q 015401 169 LGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVS 218 (407)
Q Consensus 169 ~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~ 218 (407)
.+++.++++.++.+ +.+|+++|-|..|...++++...++. |+.++=
T Consensus 54 ~~~l~~~L~~~~~~--gk~I~~yGA~~kg~tlln~~g~~~~~--I~~vvD 99 (160)
T PF08484_consen 54 KAELREFLEKLKAE--GKRIAGYGAGAKGNTLLNYFGLDNDL--IDYVVD 99 (160)
T ss_dssp HHHHHHHHHHHHHT--T--EEEE---SHHHHHHHHHT--TTT--S--EEE
T ss_pred HHHHHHHHHHHHHc--CCEEEEECcchHHHHHHHHhCCCcce--eEEEEe
Confidence 44566666666654 45899999999999999999887776 666653
No 277
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=44.23 E-value=1.6 Score=38.83 Aligned_cols=95 Identities=22% Similarity=0.252 Sum_probs=54.1
Q ss_pred CCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeC----------CCCCCCCCCCCCcccCCChhHHHHHHHH--
Q 015401 111 PDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNS----------RGCGDSPVTTPQFYSASFLGDMQEVVAH-- 178 (407)
Q Consensus 111 ~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~----------rG~G~S~~~~~~~~~~~~~~Dl~~~l~~-- 178 (407)
..-|.+++.||+.+...... .....+...++.++..+. +|++.+......+.......+...++..
T Consensus 47 ~~~p~v~~~h~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (299)
T COG1073 47 KKLPAVVFLHGFGSSKEQSL--GYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDY 124 (299)
T ss_pred ccCceEEeccCccccccCcc--hHHHHhhhceeEEeeeccccccccccccccccCccccccccchhheeeeccccccHHH
Confidence 36899999999987665422 266678888998877764 3333332211111111111111111111
Q ss_pred -HHhhCCCCcEEEEEechhHHHHHHHHhccC
Q 015401 179 -VGSKYPKAHLYAVGWSLGANILIRYLGHES 208 (407)
Q Consensus 179 -l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p 208 (407)
..... ..+....|+++|+..+..++...+
T Consensus 125 ~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~ 154 (299)
T COG1073 125 RLLGAS-LGPRILAGLSLGGPSAGALLAWGP 154 (299)
T ss_pred HHHhhh-cCcceEEEEEeeccchHHHhhcch
Confidence 11111 137889999999999888887776
No 278
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=43.91 E-value=79 Score=25.37 Aligned_cols=75 Identities=16% Similarity=0.204 Sum_probs=42.3
Q ss_pred EEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEEEe
Q 015401 115 VLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGW 193 (407)
Q Consensus 115 ~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~ 193 (407)
.-++-.|++|.........+...+......++++-. |. .+. ....+.+.+.+.+..+++.++...|+.++++++.
T Consensus 23 ~~v~N~Gi~G~~~~~~~~~~~~~~~~~~p~~vvi~~-G~--ND~-~~~~~~~~~~~~~~~lv~~i~~~~~~~~iil~~~ 97 (171)
T cd04502 23 LPVVNRGFGGSTLADCLHYFDRLVLPYQPRRVVLYA-GD--NDL-ASGRTPEEVLRDFRELVNRIRAKLPDTPIAIISI 97 (171)
T ss_pred CceeecCcccchHHHHHHHHHhhhccCCCCEEEEEE-ec--Ccc-cCCCCHHHHHHHHHHHHHHHHHHCCCCcEEEEEe
Confidence 346777887766433333333333333555555532 21 111 1112345667888899999988877777888764
No 279
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=43.74 E-value=25 Score=31.19 Aligned_cols=102 Identities=18% Similarity=0.147 Sum_probs=51.4
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHHhCCc-------EEEEEeCCCCCCCCCCC---CC-cccC--C--ChhHHHHHHHHHH
Q 015401 116 LILMPGLTGGSEDSYVRHMLLRARSKGW-------RVVVFNSRGCGDSPVTT---PQ-FYSA--S--FLGDMQEVVAHVG 180 (407)
Q Consensus 116 vv~lHG~~g~~~~~~~~~~~~~l~~~g~-------~vi~~D~rG~G~S~~~~---~~-~~~~--~--~~~Dl~~~l~~l~ 180 (407)
-|++.|. |+..-...+.+...+.+.|. +++.+|..|-=..+... .+ .+.. . -..++.++++.++
T Consensus 27 ~iv~~GA-GsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~a~~~~~~~~~~L~e~i~~v~ 105 (279)
T cd05312 27 RILFLGA-GSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKPFARKDEEKEGKSLLEVVKAVK 105 (279)
T ss_pred EEEEECc-CHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcchHHHHHHHhhcCcccCCCHHHHHHhcC
Confidence 4455664 33332334455555556677 89999999853322111 00 0000 0 1235555555555
Q ss_pred hhCCCCcEEEEEech-hHHHHHHHHhccCCCCCceeEEEEcCCCC
Q 015401 181 SKYPKAHLYAVGWSL-GANILIRYLGHESHSCPLSGAVSLCNPFN 224 (407)
Q Consensus 181 ~~~~~~~v~lvG~S~-Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~ 224 (407)
+-+++|-|- ||.+.-.+....-..+.=--+..+++|..
T Consensus 106 ------ptvlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNPt~ 144 (279)
T cd05312 106 ------PTVLIGLSGVGGAFTEEVVRAMAKSNERPIIFALSNPTS 144 (279)
T ss_pred ------CCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEEECCCcCC
Confidence 458999995 67655444433221100123555677754
No 280
>PF02606 LpxK: Tetraacyldisaccharide-1-P 4'-kinase; InterPro: IPR003758 Tetraacyldisaccharide 4'-kinase phosphorylates the 4'-position of a tetraacyldisaccharide 1-phosphate precursor (DS-1-P) of lipid A, but the enzyme has not yet been purified because of instability []. This enzyme is involved in the synthesis of lipid A portion of the bacterial lipopolysaccharide layer (LPS).; GO: 0005524 ATP binding, 0009029 tetraacyldisaccharide 4'-kinase activity, 0009245 lipid A biosynthetic process
Probab=43.56 E-value=1.1e+02 Score=27.93 Aligned_cols=43 Identities=21% Similarity=0.380 Sum_probs=30.7
Q ss_pred EEEEeCC--CCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCC
Q 015401 115 VLILMPG--LTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPV 158 (407)
Q Consensus 115 ~vv~lHG--~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~ 158 (407)
+||.+-. .+|+........++..+.++|+++.++ .||||+...
T Consensus 36 pVIsVGNltvGGTGKTP~v~~L~~~L~~~G~~~~Il-SRGYg~~~~ 80 (326)
T PF02606_consen 36 PVISVGNLTVGGTGKTPLVIWLARLLQARGYRPAIL-SRGYGRKSK 80 (326)
T ss_pred cEEEEcccccCCCCchHHHHHHHHHHHhcCCceEEE-cCCCCCCCC
Confidence 3555554 334445577788899999999997766 589998754
No 281
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=40.89 E-value=50 Score=23.07 Aligned_cols=33 Identities=18% Similarity=0.373 Sum_probs=24.5
Q ss_pred EEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEe
Q 015401 117 ILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFN 149 (407)
Q Consensus 117 v~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D 149 (407)
+++-|..|.........++..+.+.|++|+++|
T Consensus 2 ~~~~g~~G~Gktt~~~~l~~~l~~~g~~v~~~~ 34 (99)
T cd01983 2 IVVTGKGGVGKTTLAANLAAALAKRGKRVLLID 34 (99)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEC
Confidence 344455566665666777888888899999999
No 282
>PLN02924 thymidylate kinase
Probab=40.33 E-value=73 Score=27.24 Aligned_cols=43 Identities=12% Similarity=0.183 Sum_probs=35.5
Q ss_pred CCCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCC
Q 015401 110 PPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRG 152 (407)
Q Consensus 110 ~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG 152 (407)
+...+.+|.+=|.-|+..+.....+...+..+|+.|+....|+
T Consensus 12 ~~~~g~~IviEGiDGsGKsTq~~~L~~~l~~~g~~v~~~~ep~ 54 (220)
T PLN02924 12 VESRGALIVLEGLDRSGKSTQCAKLVSFLKGLGVAAELWRFPD 54 (220)
T ss_pred cCCCCeEEEEECCCCCCHHHHHHHHHHHHHhcCCCceeeeCCC
Confidence 3456778999999998887788888888889999998887775
No 283
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=40.12 E-value=23 Score=32.29 Aligned_cols=24 Identities=21% Similarity=0.105 Sum_probs=18.7
Q ss_pred CCCcEEEEEechhHHHHHHHHhcc
Q 015401 184 PKAHLYAVGWSLGANILIRYLGHE 207 (407)
Q Consensus 184 ~~~~v~lvG~S~Gg~ia~~~a~~~ 207 (407)
+-.+-+++|||+|=+.|+.+++..
T Consensus 82 Gi~P~~v~GhSlGE~aA~~aaG~l 105 (318)
T PF00698_consen 82 GIKPDAVIGHSLGEYAALVAAGAL 105 (318)
T ss_dssp THCESEEEESTTHHHHHHHHTTSS
T ss_pred ccccceeeccchhhHHHHHHCCcc
Confidence 445889999999998887666543
No 284
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=39.91 E-value=45 Score=27.38 Aligned_cols=35 Identities=14% Similarity=0.238 Sum_probs=24.3
Q ss_pred EEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCC
Q 015401 117 ILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSR 151 (407)
Q Consensus 117 v~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~r 151 (407)
.+..+-+|...+.....++..+..+|++|+++|.=
T Consensus 2 ~v~~~kGG~GKTt~a~~la~~la~~g~~VlliD~D 36 (195)
T PF01656_consen 2 AVTSGKGGVGKTTIAANLAQALARKGKKVLLIDLD 36 (195)
T ss_dssp EEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEES
T ss_pred EEEcCCCCccHHHHHHHHHhccccccccccccccC
Confidence 44455555555555667788888899999999984
No 285
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=39.26 E-value=32 Score=31.14 Aligned_cols=22 Identities=27% Similarity=0.134 Sum_probs=18.8
Q ss_pred cEEEEEechhHHHHHHHHhccC
Q 015401 187 HLYAVGWSLGANILIRYLGHES 208 (407)
Q Consensus 187 ~v~lvG~S~Gg~ia~~~a~~~p 208 (407)
.-.++|.|+|+.++..|+..++
T Consensus 44 ~d~v~GtSaGAi~ga~ya~g~~ 65 (306)
T cd07225 44 VDMVGGTSIGAFIGALYAEERN 65 (306)
T ss_pred CCEEEEECHHHHHHHHHHcCCC
Confidence 4589999999999999997643
No 286
>PRK05368 homoserine O-succinyltransferase; Provisional
Probab=39.12 E-value=62 Score=29.18 Aligned_cols=58 Identities=10% Similarity=0.178 Sum_probs=40.6
Q ss_pred hCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhc
Q 015401 140 SKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGH 206 (407)
Q Consensus 140 ~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~ 206 (407)
..+|.-+++- +|+.....+....+.+.+.+++++++.. ..-++|.++|+.+++.++.-
T Consensus 97 ~~~~DG~IIT-----GAp~e~~~fedv~YW~El~~i~~w~~~~----~~s~LgICwGaQa~a~algG 154 (302)
T PRK05368 97 DEKFDGLIIT-----GAPVEQLPFEDVDYWDELKEILDWAKTH----VTSTLFICWAAQAALYHLYG 154 (302)
T ss_pred cCCCCEEEEc-----CCCCCCccCCCCchHHHHHHHHHHHHHc----CCCEEEEcHHHHHHHHHcCC
Confidence 4566666553 3433222344455677899999999986 67899999999999877654
No 287
>PF04084 ORC2: Origin recognition complex subunit 2 ; InterPro: IPR007220 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []. ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. This entry represents subunit 2, which binds the origin of replication. It plays a role in chromosome replication and mating type transcriptional silencing.; GO: 0006260 DNA replication, 0000808 origin recognition complex, 0005634 nucleus
Probab=39.07 E-value=1.9e+02 Score=26.52 Aligned_cols=49 Identities=14% Similarity=0.152 Sum_probs=29.8
Q ss_pred hhHHHHHHHHHHhhCCCCcEEEEEechhHHH--------HHHHHhccCCCCCceeEEEEc
Q 015401 169 LGDMQEVVAHVGSKYPKAHLYAVGWSLGANI--------LIRYLGHESHSCPLSGAVSLC 220 (407)
Q Consensus 169 ~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~i--------a~~~a~~~p~~~~v~~~v~l~ 220 (407)
.+-+..+++.+.......+++++=|++=|.. ++..++..|. |.-+..++
T Consensus 120 ~~~~~~i~~~l~~~~~~~~l~lvIHnIDg~~LR~~~~Q~~La~LA~~p~---I~lIASiD 176 (326)
T PF04084_consen 120 SEQLDFIISYLESRPSPPPLYLVIHNIDGPSLRNEKAQSLLAQLASIPN---IHLIASID 176 (326)
T ss_pred HHHHHHHHHHHhccCCCCceEEEEECCCChhhcChHHHHHHHHHHcCCC---eEEEEecc
Confidence 4445556666666533568999999987765 3344455555 55555444
No 288
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=38.77 E-value=1.7e+02 Score=27.62 Aligned_cols=100 Identities=9% Similarity=0.125 Sum_probs=56.2
Q ss_pred cEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcc-----------c-------------CCCh
Q 015401 114 PVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFY-----------S-------------ASFL 169 (407)
Q Consensus 114 p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~-----------~-------------~~~~ 169 (407)
|+|+++--+ ....+. +..+...+.+.|..|+.+|.-=.|..... ...+ . +.+.
T Consensus 2 ~tI~iigT~-DTK~~E-~~yl~~~i~~~G~~v~~iDvg~~~~~~~~-~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~ 78 (403)
T PF06792_consen 2 KTIAIIGTL-DTKGEE-LLYLRDQIEAQGVEVLLIDVGTLGEPSFP-PDISREEVARAAGDSIEAVRSSGDRGEAIEAMA 78 (403)
T ss_pred CEEEEEEcc-CCCHHH-HHHHHHHHHHCCCcEEEEEcCCCCCCCCC-CCcCHHHHHHhcCCChHHhhccCCHHHHHHHHH
Confidence 344444433 434323 34555667789999999997544433211 1110 0 1112
Q ss_pred hHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEE
Q 015401 170 GDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVS 218 (407)
Q Consensus 170 ~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~ 218 (407)
+-+..++..+..+..-.-++-+|-|.|..++.......|-- +-++++
T Consensus 79 ~ga~~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPiG--~PKlmV 125 (403)
T PF06792_consen 79 RGAARFVSDLYDEGKIDGVIGIGGSGGTALATAAMRALPIG--FPKLMV 125 (403)
T ss_pred HHHHHHHHHHHhcCCccEEEEecCCccHHHHHHHHHhCCCC--CCeEEE
Confidence 22333333333332234688999999999999998887765 555554
No 289
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=38.02 E-value=51 Score=29.98 Aligned_cols=19 Identities=21% Similarity=0.316 Sum_probs=16.7
Q ss_pred EEEEechhHHHHHHHHhcc
Q 015401 189 YAVGWSLGANILIRYLGHE 207 (407)
Q Consensus 189 ~lvG~S~Gg~ia~~~a~~~ 207 (407)
.++|.|+||.+|+.++..+
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 6899999999999998643
No 290
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=37.97 E-value=40 Score=27.38 Aligned_cols=23 Identities=17% Similarity=-0.021 Sum_probs=19.6
Q ss_pred cEEEEEechhHHHHHHHHhccCC
Q 015401 187 HLYAVGWSLGANILIRYLGHESH 209 (407)
Q Consensus 187 ~v~lvG~S~Gg~ia~~~a~~~p~ 209 (407)
.-.++|-|.|+.++..++...+.
T Consensus 27 ~d~v~GtSaGAi~aa~~a~g~~~ 49 (172)
T cd07198 27 IDIIAGTSAGAIVAALLASGRDL 49 (172)
T ss_pred CCEEEEECHHHHHHHHHHcCCCH
Confidence 66899999999999999976543
No 291
>TIGR00176 mobB molybdopterin-guanine dinucleotide biosynthesis protein MobB. This molybdenum cofactor biosynthesis enzyme is similar to the urease accessory protein UreG and to the hydrogenase accessory protein HypB, both GTP hydrolases involved in loading nickel into the metallocenters of their respective target enzymes.
Probab=37.89 E-value=64 Score=25.78 Aligned_cols=39 Identities=10% Similarity=0.351 Sum_probs=30.1
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCC
Q 015401 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCG 154 (407)
Q Consensus 116 vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G 154 (407)
|+.+-|..|+........++..+..+|++|.++..-+++
T Consensus 1 vi~i~G~~gsGKTtl~~~l~~~l~~~G~~V~viK~~~~~ 39 (155)
T TIGR00176 1 VLQIVGPKNSGKTTLIERLVKALKARGYRVATIKHDHHD 39 (155)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEeccccc
Confidence 355668777777677788888888889999999876554
No 292
>PRK12467 peptide synthase; Provisional
Probab=37.80 E-value=1.3e+02 Score=38.22 Aligned_cols=97 Identities=15% Similarity=0.057 Sum_probs=56.2
Q ss_pred CcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEEE
Q 015401 113 SPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVG 192 (407)
Q Consensus 113 ~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG 192 (407)
.+.|++.|...+... .| ..+.. .+..+..++.+..++.-.... ....+...+. ...++++..-+..+..+.|
T Consensus 3692 ~~~l~~~h~~~r~~~-~~-~~l~~-~l~~~~~~~~l~~~~~~~d~~--~~~~~~~~~~---~y~~~~~~~~~~~p~~l~g 3763 (3956)
T PRK12467 3692 FPALFCRHEGLGTVF-DY-EPLAV-ILEGDRHVLGLTCRHLLDDGW--QDTSLQAMAV---QYADYILWQQAKGPYGLLG 3763 (3956)
T ss_pred ccceeeechhhcchh-hh-HHHHH-HhCCCCcEEEEeccccccccC--CccchHHHHH---HHHHHHHHhccCCCeeeee
Confidence 356999999776553 22 33333 345577888888776532221 1111222233 3444444444455899999
Q ss_pred echhHHHHHHHHhc---cCCCCCceeEEEE
Q 015401 193 WSLGANILIRYLGH---ESHSCPLSGAVSL 219 (407)
Q Consensus 193 ~S~Gg~ia~~~a~~---~p~~~~v~~~v~l 219 (407)
+|+||.++..++.. ..+. +.-+.++
T Consensus 3764 ~s~g~~~a~~~~~~l~~~g~~--~~~~~~~ 3791 (3956)
T PRK12467 3764 WSLGGTLARLVAELLEREGES--EAFLGLF 3791 (3956)
T ss_pred eecchHHHHHHHHHHHHcCCc--eeEEEEE
Confidence 99999999877654 3343 4444444
No 293
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=37.73 E-value=28 Score=32.60 Aligned_cols=49 Identities=20% Similarity=0.327 Sum_probs=34.9
Q ss_pred cCCCccceeeeecCCCCCCCCCCCChhHHhcCCCeEEEEcCCCCceeecCCC
Q 015401 307 IKHVRIPLLCIQAQNDPIAPSRGIPCEDIKANPNCLLILTPKGGHLGWVAGP 358 (407)
Q Consensus 307 l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p 358 (407)
+.+-.--+|+|.|++||+.... ..+.....+..+.+.|+++|..-+..-
T Consensus 347 vr~~~~rmlFVYG~nDPW~A~~---f~l~~g~~ds~v~~~PggnHga~I~~L 395 (448)
T PF05576_consen 347 VRNNGPRMLFVYGENDPWSAEP---FRLGKGKRDSYVFTAPGGNHGARIAGL 395 (448)
T ss_pred HHhCCCeEEEEeCCCCCcccCc---cccCCCCcceEEEEcCCCcccccccCC
Confidence 3444567899999999987533 233344568888899999998766553
No 294
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=37.46 E-value=53 Score=31.93 Aligned_cols=42 Identities=19% Similarity=0.318 Sum_probs=36.5
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCC
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGC 153 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~ 153 (407)
..|+||++-|+-|+..+.-+..+...+..+|++|.++..|..
T Consensus 38 ~~~vlIv~eG~DaaGKg~~I~~l~~~ldprg~~v~~~~~P~~ 79 (493)
T TIGR03708 38 GFPVIILIEGWDGAGKGETINLLNEWMDPRGIETHAFGRPSD 79 (493)
T ss_pred CCeEEEEEeCCCCCChHHHHHHHHHHhCcCccEEEeCCCCCH
Confidence 578999999998888878888999889999999999988743
No 295
>PRK10279 hypothetical protein; Provisional
Probab=37.28 E-value=34 Score=30.90 Aligned_cols=21 Identities=19% Similarity=0.181 Sum_probs=18.5
Q ss_pred cEEEEEechhHHHHHHHHhcc
Q 015401 187 HLYAVGWSLGANILIRYLGHE 207 (407)
Q Consensus 187 ~v~lvG~S~Gg~ia~~~a~~~ 207 (407)
.-.++|.|+|+.++..||+..
T Consensus 34 ~d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 34 IDIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred cCEEEEEcHHHHHHHHHHcCC
Confidence 568999999999999999764
No 296
>cd03131 GATase1_HTS Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). HTS, the first enzyme in methionine biosynthesis in Escherichia coli, transfers a succinyl group from succinyl-CoA to homoserine forming succinyl homoserine. It has been suggested that the succinyl group of succinyl-CoA is initially transferred to an enzyme nucleophile before subsequent transfer to homoserine. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with GATase1 domains a reactive cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. It has been proposed that this cys is in the active site of the molecule. However, as succinyl has been found bound to a conserved lysine residue, this conserved cys may play a role in dimer formation. HTS acti
Probab=37.08 E-value=33 Score=28.13 Aligned_cols=60 Identities=10% Similarity=0.147 Sum_probs=42.5
Q ss_pred hCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccC
Q 015401 140 SKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHES 208 (407)
Q Consensus 140 ~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p 208 (407)
.++|.-+++. +++.....+.-..+.+.+.+++++.+.. -.-.+|-++|+..++.++.-.+
T Consensus 60 ~~~yDGlIIT-----GApve~~~fe~v~Yw~El~~i~dwa~~~----v~stl~iCWgaqaal~~~yGi~ 119 (175)
T cd03131 60 DAKFDGLIVT-----GAPVEHLPFEQVDYWEELTEILDWAKTH----VTSTLFSCWAAMAALYYFYGIK 119 (175)
T ss_pred ccCCCEEEEe-----CCCcccCCccccchHHHHHHHHHHHHHh----CcchHHHHHHHHHHHHHHcCcc
Confidence 4566655553 3333333344456778899999999977 5678999999999998876543
No 297
>PRK06696 uridine kinase; Validated
Probab=37.03 E-value=82 Score=26.86 Aligned_cols=38 Identities=13% Similarity=0.379 Sum_probs=30.5
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEe
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFN 149 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D 149 (407)
++|.||.+-|.+|+..+.....++..+.+.|..++.+.
T Consensus 20 ~~~~iI~I~G~sgsGKSTlA~~L~~~l~~~g~~v~~~~ 57 (223)
T PRK06696 20 TRPLRVAIDGITASGKTTFADELAEEIKKRGRPVIRAS 57 (223)
T ss_pred CCceEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEec
Confidence 57899999999998887777777777767788887744
No 298
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=36.26 E-value=33 Score=30.79 Aligned_cols=23 Identities=26% Similarity=0.086 Sum_probs=18.3
Q ss_pred CCCcEEEEEechhHHHHHHHHhc
Q 015401 184 PKAHLYAVGWSLGANILIRYLGH 206 (407)
Q Consensus 184 ~~~~v~lvG~S~Gg~ia~~~a~~ 206 (407)
+-.+-.++|||+|-+.|+.+++.
T Consensus 80 Gi~p~~~~GhSlGE~aA~~~ag~ 102 (298)
T smart00827 80 GVRPDAVVGHSLGEIAAAYVAGV 102 (298)
T ss_pred CCcccEEEecCHHHHHHHHHhCC
Confidence 44578999999999988776654
No 299
>cd02027 APSK Adenosine 5'-phosphosulfate kinase (APSK) catalyzes the phosphorylation of adenosine 5'-phosphosulfate to form 3'-phosphoadenosine 5'-phosphosulfate (PAPS). The end-product PAPS is a biologically "activated" sulfate form important for the assimilation of inorganic sulfate.
Probab=36.08 E-value=90 Score=24.62 Aligned_cols=34 Identities=24% Similarity=0.456 Sum_probs=26.3
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEe
Q 015401 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFN 149 (407)
Q Consensus 116 vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D 149 (407)
||++-|..|+..+.+...+...+...|+.++.+|
T Consensus 1 ~i~i~G~~GsGKSTla~~L~~~l~~~g~~~~~i~ 34 (149)
T cd02027 1 VIWLTGLSGSGKSTIARALEEKLFQRGRPVYVLD 34 (149)
T ss_pred CEEEEcCCCCCHHHHHHHHHHHHHHcCCCEEEEc
Confidence 4677799888887777777777777788887776
No 300
>PF10412 TrwB_AAD_bind: Type IV secretion-system coupling protein DNA-binding domain; InterPro: IPR019476 The plasmid conjugative coupling protein TraD (also known as TrwB) is a basic integral inner-membrane nucleoside-triphosphate-binding protein. It is the structural prototype for the type IV secretion system coupling proteins, a family of proteins essential for macromolecular transport between cells []. This protein forms hexamers from six structurally very similar protomers []. This hexamer contains a central channel running from the cytosolic pole (formed by the all-alpha domains) to the membrane pole ending at the transmembrane pore shaped by 12 transmembrane helices, rendering an overall mushroom-like structure. The TrwB all-alpha domain appears to be the DNA-binding domain of the structure. ; PDB: 1E9S_D 1E9R_F 1GKI_B 1GL7_G 1GL6_A.
Probab=36.06 E-value=43 Score=31.49 Aligned_cols=36 Identities=33% Similarity=0.719 Sum_probs=27.9
Q ss_pred EEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCC
Q 015401 117 ILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRG 152 (407)
Q Consensus 117 v~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG 152 (407)
+++.|-+|+.....+..++..+.++|.++|++|.-|
T Consensus 18 ~li~G~~GsGKT~~i~~ll~~~~~~g~~~iI~D~kg 53 (386)
T PF10412_consen 18 ILIIGATGSGKTQAIRHLLDQIRARGDRAIIYDPKG 53 (386)
T ss_dssp EEEEE-TTSSHHHHHHHHHHHHHHTT-EEEEEEETT
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHcCCEEEEEECCc
Confidence 556677787777778888888889999999999765
No 301
>PRK02399 hypothetical protein; Provisional
Probab=36.06 E-value=2.5e+02 Score=26.58 Aligned_cols=101 Identities=13% Similarity=0.105 Sum_probs=54.3
Q ss_pred cEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCC----C------Cccc-------------CCChh
Q 015401 114 PVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTT----P------QFYS-------------ASFLG 170 (407)
Q Consensus 114 p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~----~------~~~~-------------~~~~~ 170 (407)
+.|+++ |-.....+. +..+...+.+.|..|+.+|.-..|...... . .... +.+.+
T Consensus 4 ~~I~ii-gT~DTK~~E-~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ 81 (406)
T PRK02399 4 KRIYIA-GTLDTKGEE-LAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAE 81 (406)
T ss_pred CEEEEE-eccCCcHHH-HHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHH
Confidence 444444 433444333 244455566779999999984333211100 0 0000 11122
Q ss_pred HHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEE
Q 015401 171 DMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVS 218 (407)
Q Consensus 171 Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~ 218 (407)
-+..++..+..+..-.-++-+|-|.|..++.......|-- +-++++
T Consensus 82 ga~~~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LPiG--~PKlmV 127 (406)
T PRK02399 82 GAAAFVRELYERGDVAGVIGLGGSGGTALATPAMRALPIG--VPKLMV 127 (406)
T ss_pred HHHHHHHHHHhcCCccEEEEecCcchHHHHHHHHHhCCCC--CCeEEE
Confidence 2333333333333344788999999999999988887765 555544
No 302
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=35.76 E-value=41 Score=27.82 Aligned_cols=34 Identities=15% Similarity=-0.088 Sum_probs=23.1
Q ss_pred HHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccC
Q 015401 174 EVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHES 208 (407)
Q Consensus 174 ~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p 208 (407)
.+++.+... ....=.++|.|.||.++..++....
T Consensus 16 Gvl~~L~e~-~~~~d~i~GtSaGai~aa~~a~g~~ 49 (194)
T cd07207 16 GALKALEEA-GILKKRVAGTSAGAITAALLALGYS 49 (194)
T ss_pred HHHHHHHHc-CCCcceEEEECHHHHHHHHHHcCCC
Confidence 344444433 2224689999999999999987543
No 303
>PF02492 cobW: CobW/HypB/UreG, nucleotide-binding domain; InterPro: IPR003495 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. CobW proteins are generally found proximal to the trimeric cobaltochelatase subunit CobN, which is essential for vitamin B12 (cobalamin) biosynthesis []. They contain a P-loop nucleotide-binding loop in the N-terminal domain and a histidine-rich region in the C-terminal portion suggesting a role in metal binding, possibly as an intermediary between the cobalt transport and chelation systems. CobW might be involved in cobalt reduction leading to cobalt(I) corrinoids. This entry represents CobW-like proteins, including P47K (P31521 from SWISSPROT), a Pseudomonas chlororaphis protein needed for nitrile hydratase expression [], and urease accessory protein UreG, which acts as a chaperone in the activation of urease upon insertion of nickel into the active site [].; PDB: 2WSM_B 1NIJ_A 2HF9_A 2HF8_B.
Probab=35.61 E-value=50 Score=27.02 Aligned_cols=33 Identities=27% Similarity=0.574 Sum_probs=23.8
Q ss_pred EEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEE
Q 015401 115 VLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVF 148 (407)
Q Consensus 115 ~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~ 148 (407)
||+++.|+.|+....++..++. ...+|.++.++
T Consensus 1 Pv~ii~GfLGsGKTTli~~ll~-~~~~~~~~~vI 33 (178)
T PF02492_consen 1 PVIIITGFLGSGKTTLINHLLK-RNRQGERVAVI 33 (178)
T ss_dssp -EEEEEESTTSSHHHHHHHHHH-HHTTTS-EEEE
T ss_pred CEEEEEcCCCCCHHHHHHHHHH-HhcCCceeEEE
Confidence 5889999999998778777776 55566666555
No 304
>PRK10751 molybdopterin-guanine dinucleotide biosynthesis protein B; Provisional
Probab=35.49 E-value=99 Score=25.31 Aligned_cols=44 Identities=9% Similarity=0.174 Sum_probs=34.3
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCC
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGD 155 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~ 155 (407)
..++|+.+=|..|+.....+..++..+..+|++|-++-+-|+|.
T Consensus 4 ~~~~ii~ivG~sgsGKTTLi~~li~~l~~~g~~vg~Ik~~~~~~ 47 (173)
T PRK10751 4 TMIPLLAIAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDM 47 (173)
T ss_pred CCceEEEEECCCCChHHHHHHHHHHHHhhcCCeEEEEEEcCCCc
Confidence 45667777798888877777888888888899988887777654
No 305
>PF01935 DUF87: Domain of unknown function DUF87; InterPro: IPR002789 The function of this domain is unknown. It contains several conserved aspartates and histidines that could be metal ligands.
Probab=35.45 E-value=60 Score=27.75 Aligned_cols=36 Identities=31% Similarity=0.537 Sum_probs=29.1
Q ss_pred EEeCCCCCCCccHHHHHHHHHHH-hCCcEEEEEeCCC
Q 015401 117 ILMPGLTGGSEDSYVRHMLLRAR-SKGWRVVVFNSRG 152 (407)
Q Consensus 117 v~lHG~~g~~~~~~~~~~~~~l~-~~g~~vi~~D~rG 152 (407)
+.+=|.+|+..+..+..++..+. ..++.++++|.=|
T Consensus 26 ~~I~G~TGsGKS~~~~~ll~~l~~~~~~~~ii~D~~G 62 (229)
T PF01935_consen 26 IAIFGTTGSGKSNTVKVLLEELLKKKGAKVIIFDPHG 62 (229)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhcCCCCEEEEcCCC
Confidence 34557788888777888888888 8999999999954
No 306
>PRK13230 nitrogenase reductase-like protein; Reviewed
Probab=35.38 E-value=70 Score=28.38 Aligned_cols=41 Identities=17% Similarity=0.199 Sum_probs=30.7
Q ss_pred EEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCC
Q 015401 115 VLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDS 156 (407)
Q Consensus 115 ~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S 156 (407)
++.++ |=+|.......-.++..|...|++|+++|+=-.|.+
T Consensus 3 ~i~~~-gKGGVGKTT~a~nLA~~La~~G~rVLliD~Dpq~n~ 43 (279)
T PRK13230 3 KFCFY-GKGGIGKSTTVCNIAAALAESGKKVLVVGCDPKADC 43 (279)
T ss_pred EEEEE-CCCCCcHHHHHHHHHHHHHhCCCEEEEEeeCCcccc
Confidence 45556 766666666667888889999999999998665544
No 307
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=35.28 E-value=48 Score=30.07 Aligned_cols=30 Identities=17% Similarity=0.140 Sum_probs=21.9
Q ss_pred HHHHHhhC-CCCcEEEEEechhHHHHHHHHh
Q 015401 176 VAHVGSKY-PKAHLYAVGWSLGANILIRYLG 205 (407)
Q Consensus 176 l~~l~~~~-~~~~v~lvG~S~Gg~ia~~~a~ 205 (407)
.+.+..+. +..+.++.|||+|=+.|+..++
T Consensus 74 ~~~l~~~~~~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 74 YRVLAEQGLGVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred HHHHHHhcCCCCCceeecccHhHHHHHHHcc
Confidence 34444443 4568899999999998887765
No 308
>PRK00652 lpxK tetraacyldisaccharide 4'-kinase; Reviewed
Probab=35.25 E-value=1.6e+02 Score=26.90 Aligned_cols=41 Identities=22% Similarity=0.361 Sum_probs=29.0
Q ss_pred EEEeCC--CCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCC
Q 015401 116 LILMPG--LTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSP 157 (407)
Q Consensus 116 vv~lHG--~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~ 157 (407)
||.+-. .+|+........++..+.++|++|.++ .||+|+..
T Consensus 51 vIsVGNi~vGGtGKTP~v~~L~~~l~~~g~~~~il-sRGYg~~~ 93 (325)
T PRK00652 51 VIVVGNITVGGTGKTPVVIALAEQLQARGLKPGVV-SRGYGGKL 93 (325)
T ss_pred EEEEcCeeCCCCChHHHHHHHHHHHHHCCCeEEEE-CCCCCCCc
Confidence 555532 234455577788888888999987766 68998764
No 309
>PRK14974 cell division protein FtsY; Provisional
Probab=34.82 E-value=1.7e+02 Score=27.03 Aligned_cols=71 Identities=18% Similarity=0.320 Sum_probs=41.6
Q ss_pred HHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCCCCcee
Q 015401 136 LRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSG 215 (407)
Q Consensus 136 ~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~ 215 (407)
......|+.++.+|-.|....+ ..+.+.+..+.+.+. |. .+++|.-+.-|.-+..-+..+.....+.+
T Consensus 216 ~~~~~~~~DvVLIDTaGr~~~~--------~~lm~eL~~i~~~~~---pd-~~iLVl~a~~g~d~~~~a~~f~~~~~~~g 283 (336)
T PRK14974 216 EHAKARGIDVVLIDTAGRMHTD--------ANLMDELKKIVRVTK---PD-LVIFVGDALAGNDAVEQAREFNEAVGIDG 283 (336)
T ss_pred HHHHhCCCCEEEEECCCccCCc--------HHHHHHHHHHHHhhC---Cc-eEEEeeccccchhHHHHHHHHHhcCCCCE
Confidence 3345578999999998765422 222344444444333 22 56677777667666666655443223777
Q ss_pred EEE
Q 015401 216 AVS 218 (407)
Q Consensus 216 ~v~ 218 (407)
+|+
T Consensus 284 iIl 286 (336)
T PRK14974 284 VIL 286 (336)
T ss_pred EEE
Confidence 776
No 310
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=34.37 E-value=36 Score=30.55 Aligned_cols=24 Identities=17% Similarity=0.084 Sum_probs=18.8
Q ss_pred CCCcEEEEEechhHHHHHHHHhcc
Q 015401 184 PKAHLYAVGWSLGANILIRYLGHE 207 (407)
Q Consensus 184 ~~~~v~lvG~S~Gg~ia~~~a~~~ 207 (407)
+..+..++|||+|-..|+.+++-.
T Consensus 74 g~~P~~v~GhS~GE~aAa~~aG~~ 97 (295)
T TIGR03131 74 LPRPSAVAGYSVGEYAAAVVAGVL 97 (295)
T ss_pred CCCCcEEeecCHHHHHHHHHhCCC
Confidence 345889999999998888776543
No 311
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=34.27 E-value=1.4e+02 Score=26.21 Aligned_cols=39 Identities=8% Similarity=0.237 Sum_probs=25.8
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcE-EEEEeCC
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWR-VVVFNSR 151 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~-vi~~D~r 151 (407)
..+.|++++-..+ ..+.|.......+.+.|+. |-.++.+
T Consensus 27 ~~~rI~~iptAS~-~~~~~~~~~~~~~~~lG~~~v~~l~i~ 66 (250)
T TIGR02069 27 EDAIIVIITSASE-EPREVGERYITIFSRLGVKEVKILDVR 66 (250)
T ss_pred CCceEEEEeCCCC-ChHHHHHHHHHHHHHcCCceeEEEecC
Confidence 4567889987644 3335566666677788884 6666664
No 312
>COG1763 MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]
Probab=34.18 E-value=91 Score=25.17 Aligned_cols=41 Identities=10% Similarity=0.321 Sum_probs=35.1
Q ss_pred cEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCC
Q 015401 114 PVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCG 154 (407)
Q Consensus 114 p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G 154 (407)
+.|+=+=|+.++.....+..++..|..+||+|.++-.-+|+
T Consensus 2 ~~Il~ivG~k~SGKTTLie~lv~~L~~~G~rVa~iKH~hh~ 42 (161)
T COG1763 2 MKILGIVGYKNSGKTTLIEKLVRKLKARGYRVATVKHAHHD 42 (161)
T ss_pred CcEEEEEecCCCChhhHHHHHHHHHHhCCcEEEEEEecCCC
Confidence 35677778877777778889999999999999999999998
No 313
>CHL00175 minD septum-site determining protein; Validated
Probab=33.93 E-value=1e+02 Score=27.41 Aligned_cols=40 Identities=15% Similarity=0.338 Sum_probs=30.2
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCC
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSR 151 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~r 151 (407)
...+|.++.|-+|.........++..+.+.|++|+++|.=
T Consensus 14 ~~~vi~v~s~KGGvGKTt~a~nLA~~La~~g~~vlliD~D 53 (281)
T CHL00175 14 MSRIIVITSGKGGVGKTTTTANLGMSIARLGYRVALIDAD 53 (281)
T ss_pred CceEEEEEcCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 4456777777666666566677788888899999999884
No 314
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=33.91 E-value=90 Score=21.54 Aligned_cols=43 Identities=14% Similarity=0.118 Sum_probs=31.1
Q ss_pred CChhHHHHHHHHHHhhC---CCCcEEEEEechhHHHHHHHHhccCC
Q 015401 167 SFLGDMQEVVAHVGSKY---PKAHLYAVGWSLGANILIRYLGHESH 209 (407)
Q Consensus 167 ~~~~Dl~~~l~~l~~~~---~~~~v~lvG~S~Gg~ia~~~a~~~p~ 209 (407)
.+...+...+++++.+. +.+++.++|-|.|=.+|.+.++.+.-
T Consensus 18 GC~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aFg~ 63 (78)
T PF12242_consen 18 GCARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAFGA 63 (78)
T ss_dssp HHHHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHhcC
Confidence 34567778888887642 23589999999999999888877654
No 315
>PRK13700 conjugal transfer protein TraD; Provisional
Probab=33.62 E-value=67 Score=32.77 Aligned_cols=37 Identities=24% Similarity=0.452 Sum_probs=32.7
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCC
Q 015401 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRG 152 (407)
Q Consensus 116 vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG 152 (407)
=++++|-+|+..+..+..++....++|-++|++|.-|
T Consensus 187 H~li~GttGSGKS~~i~~LL~~ir~RGdrAIIyD~~G 223 (732)
T PRK13700 187 NFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSG 223 (732)
T ss_pred ceEEeCCCCCCHHHHHHHHHHHHHHcCCeEEEEeCCC
Confidence 4788898898888888899998989999999999887
No 316
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=33.44 E-value=47 Score=29.46 Aligned_cols=21 Identities=19% Similarity=-0.026 Sum_probs=18.2
Q ss_pred cEEEEEechhHHHHHHHHhcc
Q 015401 187 HLYAVGWSLGANILIRYLGHE 207 (407)
Q Consensus 187 ~v~lvG~S~Gg~ia~~~a~~~ 207 (407)
.=.++|.|+|+.++..||...
T Consensus 39 ~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 39 IDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred ccEEEEECHHHHHHHHHHcCC
Confidence 457999999999999999764
No 317
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=33.19 E-value=73 Score=29.40 Aligned_cols=62 Identities=19% Similarity=0.238 Sum_probs=35.7
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHh
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGS 181 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~ 181 (407)
...+||.+-|. .+++. .+..|.++||.|+.+.+.-+.... ...........|+..+.+.|+.
T Consensus 3 ~~kV~v~mSGG---VDSSV---aA~lLk~QGyeViGl~m~~~~~~~--~~~C~s~~d~~da~~va~~LGI 64 (356)
T COG0482 3 KKKVLVGMSGG---VDSSV---AAYLLKEQGYEVIGLFMKNWDEDG--GGGCCSEEDLRDAERVADQLGI 64 (356)
T ss_pred CcEEEEEccCC---HHHHH---HHHHHHHcCCeEEEEEEEeeccCC--CCcCCchhHHHHHHHHHHHhCC
Confidence 34556666553 34333 233467889999999988765411 1112233445677777777765
No 318
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=33.12 E-value=3e+02 Score=24.65 Aligned_cols=60 Identities=17% Similarity=0.175 Sum_probs=32.6
Q ss_pred HHHHHHHHHHhCCcE--EEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEEEechhHHHH
Q 015401 130 YVRHMLLRARSKGWR--VVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANIL 200 (407)
Q Consensus 130 ~~~~~~~~l~~~g~~--vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia 200 (407)
|+...+..+.+.|.. =|++|. |.|.+.... ..-.+..-++.++. + .-.+++|+|-=.++.
T Consensus 164 ~l~~~i~~a~~~GI~~~~IilDP-GiGF~k~~~-------~n~~ll~~l~~l~~-l--g~Pilvg~SRKsfig 225 (282)
T PRK11613 164 YFIEQIARCEAAGIAKEKLLLDP-GFGFGKNLS-------HNYQLLARLAEFHH-F--NLPLLVGMSRKSMIG 225 (282)
T ss_pred HHHHHHHHHHHcCCChhhEEEeC-CCCcCCCHH-------HHHHHHHHHHHHHh-C--CCCEEEEecccHHHH
Confidence 445556667888986 788886 666543110 11122333333432 1 245799999554443
No 319
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=33.06 E-value=2e+02 Score=25.81 Aligned_cols=35 Identities=29% Similarity=0.456 Sum_probs=27.1
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCC
Q 015401 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCG 154 (407)
Q Consensus 116 vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G 154 (407)
+-+|-|.+|... .| ++..|+++||.|..+..|..-
T Consensus 4 ~ALITGITGQDG-sY---La~lLLekGY~VhGi~Rrss~ 38 (345)
T COG1089 4 VALITGITGQDG-SY---LAELLLEKGYEVHGIKRRSSS 38 (345)
T ss_pred eEEEecccCCch-HH---HHHHHHhcCcEEEEEeecccc
Confidence 567889988554 55 566789999999999998543
No 320
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=33.06 E-value=59 Score=24.23 Aligned_cols=32 Identities=19% Similarity=0.533 Sum_probs=23.2
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeC
Q 015401 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNS 150 (407)
Q Consensus 116 vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~ 150 (407)
||++.|.+|+..+.+...++..+ |+.++..|-
T Consensus 1 vI~I~G~~gsGKST~a~~La~~~---~~~~i~~d~ 32 (121)
T PF13207_consen 1 VIIISGPPGSGKSTLAKELAERL---GFPVISMDD 32 (121)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHH---TCEEEEEHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHH---CCeEEEecc
Confidence 68899998888755544443333 899999988
No 321
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=32.89 E-value=1.9e+02 Score=23.07 Aligned_cols=73 Identities=4% Similarity=0.098 Sum_probs=42.5
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEEEe
Q 015401 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGW 193 (407)
Q Consensus 116 vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~ 193 (407)
-+.-.|..|.........+...+ .....++++.+-+.-.. .....+.+.+.+..+++.++...++.++++++.
T Consensus 23 ~v~n~g~~G~~~~~~~~~l~~~~-~~~pd~vvl~~G~ND~~----~~~~~~~~~~~l~~li~~~~~~~~~~~vi~~~~ 95 (169)
T cd01828 23 KVANRGISGDTTRGLLARLDEDV-ALQPKAIFIMIGINDLA----QGTSDEDIVANYRTILEKLRKHFPNIKIVVQSI 95 (169)
T ss_pred ceEecCcccccHHHHHHHHHHHh-ccCCCEEEEEeeccCCC----CCCCHHHHHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 35667776655444434433333 44557777754322111 123346677888888988888766667777653
No 322
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=32.79 E-value=62 Score=27.63 Aligned_cols=30 Identities=30% Similarity=0.407 Sum_probs=20.9
Q ss_pred cEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeC
Q 015401 114 PVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNS 150 (407)
Q Consensus 114 p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~ 150 (407)
+.=||++|- |.+.+ +..|+++||+|+.+|+
T Consensus 38 ~~rvLvPgC-G~g~D------~~~La~~G~~VvGvDl 67 (218)
T PF05724_consen 38 GGRVLVPGC-GKGYD------MLWLAEQGHDVVGVDL 67 (218)
T ss_dssp SEEEEETTT-TTSCH------HHHHHHTTEEEEEEES
T ss_pred CCeEEEeCC-CChHH------HHHHHHCCCeEEEEec
Confidence 345777884 54443 2257789999999998
No 323
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=32.44 E-value=65 Score=27.60 Aligned_cols=36 Identities=6% Similarity=0.300 Sum_probs=26.1
Q ss_pred CcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEe
Q 015401 113 SPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFN 149 (407)
Q Consensus 113 ~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D 149 (407)
...||++|....... ..+..++..+.++||+++.++
T Consensus 186 ~g~IiLlHd~~~~t~-~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 186 PGAILLLHAVSKDNA-EALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CCcEEEEECCCCCHH-HHHHHHHHHHHHCCCEEEEhH
Confidence 346999997433222 356888889999999998774
No 324
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=32.29 E-value=57 Score=29.01 Aligned_cols=23 Identities=26% Similarity=0.214 Sum_probs=18.6
Q ss_pred CCcEEEEEechhHHHHHHHHhcc
Q 015401 185 KAHLYAVGWSLGANILIRYLGHE 207 (407)
Q Consensus 185 ~~~v~lvG~S~Gg~ia~~~a~~~ 207 (407)
-.+-.++|||+|=+.|+.+++..
T Consensus 82 i~p~~v~GhS~GE~aAa~~aG~l 104 (290)
T TIGR00128 82 LKPDFAAGHSLGEYSALVAAGAL 104 (290)
T ss_pred CCCCEEeecCHHHHHHHHHhCCC
Confidence 45889999999998887776544
No 325
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=32.26 E-value=89 Score=29.85 Aligned_cols=39 Identities=15% Similarity=0.342 Sum_probs=32.0
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeC
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNS 150 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~ 150 (407)
.+|.+|++-|..|.........++..+..+|++|.+++.
T Consensus 98 ~~~~vi~lvG~~GvGKTTtaaKLA~~l~~~G~kV~lV~~ 136 (429)
T TIGR01425 98 GKQNVIMFVGLQGSGKTTTCTKLAYYYQRKGFKPCLVCA 136 (429)
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEcC
Confidence 458899999999988776777788888888998887765
No 326
>PRK13768 GTPase; Provisional
Probab=31.72 E-value=82 Score=27.59 Aligned_cols=36 Identities=14% Similarity=0.361 Sum_probs=29.1
Q ss_pred EEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeC
Q 015401 115 VLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNS 150 (407)
Q Consensus 115 ~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~ 150 (407)
-++++-|.+|...+.+...+...+...|.+|+++|+
T Consensus 3 ~~i~v~G~~G~GKTt~~~~~~~~l~~~g~~v~~i~~ 38 (253)
T PRK13768 3 YIVFFLGTAGSGKTTLTKALSDWLEEQGYDVAIVNL 38 (253)
T ss_pred EEEEEECCCCccHHHHHHHHHHHHHhcCCceEEEEC
Confidence 367777888877777778888888889999999886
No 327
>cd02036 MinD Bacterial cell division requires the formation of a septum at mid-cell. The site is determined by the min operon products MinC, MinD and MinE. MinC is a nonspecific inhibitor of the septum protein FtsZ. MinE is the supressor of MinC. MinD plays a pivotal role, selecting the mid-cell over other sites through the activation and regulation of MinC and MinE. MinD is a membrane-associated ATPase, related to nitrogenase iron protein. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. MinD is a monomer.
Probab=31.44 E-value=91 Score=25.10 Aligned_cols=36 Identities=14% Similarity=0.324 Sum_probs=25.5
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCC
Q 015401 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSR 151 (407)
Q Consensus 116 vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~r 151 (407)
|.+..+-+|...+.....++..+.++|++|+.+|.=
T Consensus 2 i~v~~~kgG~GKtt~a~~la~~l~~~g~~vllvD~D 37 (179)
T cd02036 2 IVVTSGKGGVGKTTTTANLGTALAQLGYKVVLIDAD 37 (179)
T ss_pred EEEeeCCCCCCHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 344444445555566677888888999999999864
No 328
>PRK09739 hypothetical protein; Provisional
Probab=31.31 E-value=3.1e+02 Score=22.81 Aligned_cols=40 Identities=15% Similarity=0.165 Sum_probs=23.2
Q ss_pred EEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCC
Q 015401 115 VLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCG 154 (407)
Q Consensus 115 ~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G 154 (407)
.+|..|.-.++........++..+.+.|+.|..+|+....
T Consensus 7 liI~~sp~~~s~s~~l~~~~~~~~~~~g~~v~~~dL~~~~ 46 (199)
T PRK09739 7 YLVWAHPRHDSLTAKVAEAIHQRAQERGHQVEELDLYRSG 46 (199)
T ss_pred EEEEcCCCCCCcHHHHHHHHHHHHHHCCCEEEEEEhhhhC
Confidence 3444454333222233455556666788999999987543
No 329
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=31.28 E-value=60 Score=27.78 Aligned_cols=22 Identities=23% Similarity=-0.038 Sum_probs=18.3
Q ss_pred cEEEEEechhHHHHHHHHhccC
Q 015401 187 HLYAVGWSLGANILIRYLGHES 208 (407)
Q Consensus 187 ~v~lvG~S~Gg~ia~~~a~~~p 208 (407)
.-.++|.|.|+.++..++...+
T Consensus 29 ~~~i~GtSaGAi~aa~~a~g~~ 50 (221)
T cd07210 29 PSAISGTSAGALVGGLFASGIS 50 (221)
T ss_pred ceEEEEeCHHHHHHHHHHcCCC
Confidence 4579999999999999986543
No 330
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=31.18 E-value=52 Score=32.55 Aligned_cols=48 Identities=8% Similarity=0.140 Sum_probs=34.5
Q ss_pred CCC-ccceeeeecCCCCCCCCCCCChhHHh-------cCCCeEEEEcCCCCceeec
Q 015401 308 KHV-RIPLLCIQAQNDPIAPSRGIPCEDIK-------ANPNCLLILTPKGGHLGWV 355 (407)
Q Consensus 308 ~~i-~~Pvlii~g~~D~~~~~~~~~~~~~~-------~~~~~~~~~~~~~gH~~~~ 355 (407)
.++ ..|++|+||..|-++|.....+.+.. ......++++.++-|+.-+
T Consensus 551 g~L~GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHfDaf 606 (690)
T PF10605_consen 551 GNLHGKPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHFDAF 606 (690)
T ss_pred CCcCCCceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeechhh
Confidence 345 57999999999999998755432221 1245788899999998543
No 331
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=30.92 E-value=1.6e+02 Score=23.47 Aligned_cols=52 Identities=17% Similarity=0.232 Sum_probs=35.9
Q ss_pred HhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHH
Q 015401 139 RSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRY 203 (407)
Q Consensus 139 ~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~ 203 (407)
...|-.|+++|.+|--.| .+.+...++.++... ..=.+++|-|.|=.-++.-
T Consensus 64 i~~~~~vi~Ld~~Gk~~s------------Se~fA~~l~~~~~~G-~~i~f~IGG~~Gl~~~~~~ 115 (155)
T COG1576 64 IPKGSYVVLLDIRGKALS------------SEEFADFLERLRDDG-RDISFLIGGADGLSEAVKA 115 (155)
T ss_pred cCCCCeEEEEecCCCcCC------------hHHHHHHHHHHHhcC-CeEEEEEeCcccCCHHHHH
Confidence 356789999999986544 255667777777653 3456899999985555443
No 332
>cd02028 UMPK_like Uridine monophosphate kinase_like (UMPK_like) is a family of proteins highly similar to the uridine monophosphate kinase (UMPK, EC 2.7.1.48), also known as uridine kinase or uridine-cytidine kinase (UCK).
Probab=30.85 E-value=2e+02 Score=23.57 Aligned_cols=38 Identities=16% Similarity=0.336 Sum_probs=26.8
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCC
Q 015401 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGC 153 (407)
Q Consensus 116 vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~ 153 (407)
||.+-|..|+..+.+...+...+...|..+.++..=++
T Consensus 1 ii~i~G~sgsGKttla~~l~~~l~~~~~~~~~i~~Ddf 38 (179)
T cd02028 1 VVGIAGPSGSGKTTFAKKLSNQLRVNGIGPVVISLDDY 38 (179)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHHcCCCEEEEehhhc
Confidence 57788888888877767777767666777766654444
No 333
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=30.62 E-value=92 Score=23.99 Aligned_cols=14 Identities=43% Similarity=0.904 Sum_probs=10.6
Q ss_pred HHHHHhCCcEEEEE
Q 015401 135 LLRARSKGWRVVVF 148 (407)
Q Consensus 135 ~~~l~~~g~~vi~~ 148 (407)
+..|.+.||+|+++
T Consensus 101 ~~~L~~~GwrvlvV 114 (150)
T COG3727 101 IKRLQQLGWRVLVV 114 (150)
T ss_pred HHHHHHcCCeEEEE
Confidence 44577889999776
No 334
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=30.56 E-value=1.6e+02 Score=24.07 Aligned_cols=30 Identities=17% Similarity=0.290 Sum_probs=22.7
Q ss_pred ccCCChhHHHHHHHHHHhhCCCCcEEEEEe
Q 015401 164 YSASFLGDMQEVVAHVGSKYPKAHLYAVGW 193 (407)
Q Consensus 164 ~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~ 193 (407)
..+.+.+.+..+++.++...++.++++++.
T Consensus 86 ~~~~~~~~~~~~i~~~~~~~~~~~ii~~t~ 115 (199)
T cd01838 86 PLDEYKENLRKIVSHLKSLSPKTKVILITP 115 (199)
T ss_pred cHHHHHHHHHHHHHHHHhhCCCCeEEEeCC
Confidence 345667888899998888767778888764
No 335
>PRK05541 adenylylsulfate kinase; Provisional
Probab=30.56 E-value=93 Score=25.21 Aligned_cols=38 Identities=18% Similarity=0.332 Sum_probs=29.0
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEe
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFN 149 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D 149 (407)
..|.+|++-|..|+..+.....+...+...+..++.+|
T Consensus 5 ~~~~~I~i~G~~GsGKst~a~~l~~~l~~~~~~~~~~~ 42 (176)
T PRK05541 5 PNGYVIWITGLAGSGKTTIAKALYERLKLKYSNVIYLD 42 (176)
T ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHHHHHcCCcEEEEe
Confidence 46779999999998887776677777766666777775
No 336
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=30.22 E-value=52 Score=29.78 Aligned_cols=23 Identities=22% Similarity=0.086 Sum_probs=19.8
Q ss_pred cEEEEEechhHHHHHHHHhccCC
Q 015401 187 HLYAVGWSLGANILIRYLGHESH 209 (407)
Q Consensus 187 ~v~lvG~S~Gg~ia~~~a~~~p~ 209 (407)
.-.+.|-|+|+.++..+|.....
T Consensus 40 ~~~iaGtS~GAiva~l~A~g~~~ 62 (306)
T COG1752 40 IDVIAGTSAGAIVAALYAAGMDE 62 (306)
T ss_pred ccEEEecCHHHHHHHHHHcCCCh
Confidence 66899999999999999986544
No 337
>TIGR02759 TraD_Ftype type IV conjugative transfer system coupling protein TraD. The TraD protein performs an essential coupling function in conjugative type IV secretion systems. This protein sits at the inner membrane in contact with the assembled pilus and its scaffold as well as the relaxosome-plasmid DNA complex (through TraM).
Probab=30.11 E-value=84 Score=31.35 Aligned_cols=38 Identities=26% Similarity=0.490 Sum_probs=30.7
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCC
Q 015401 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGC 153 (407)
Q Consensus 116 vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~ 153 (407)
=++++|-+|+..+..+..++....++|.+++++|.-|-
T Consensus 178 h~li~G~tGsGKs~~i~~ll~~~~~~g~~~ii~D~~g~ 215 (566)
T TIGR02759 178 HILIHGTTGSGKSVAIRKLLRWIRQRGDRAIIYDKGCT 215 (566)
T ss_pred ceEEEcCCCCCHHHHHHHHHHHHHhcCCeEEEEECCCC
Confidence 46777878888777778888888888999999998763
No 338
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=29.99 E-value=4e+02 Score=23.68 Aligned_cols=66 Identities=12% Similarity=0.176 Sum_probs=40.6
Q ss_pred CCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCCCCceeEEE
Q 015401 141 KGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLSGAVS 218 (407)
Q Consensus 141 ~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~~~v~ 218 (407)
.++.++.+|.+|..... .+.+.++.+.+...-|...+.++.-++++.-+...+..+.. ..++++|+
T Consensus 153 ~~~D~ViIDt~Gr~~~~-----------~~~l~el~~~~~~~~~~~~~LVl~a~~~~~d~~~~~~~f~~-~~~~~~I~ 218 (270)
T PRK06731 153 ARVDYILIDTAGKNYRA-----------SETVEEMIETMGQVEPDYICLTLSASMKSKDMIEIITNFKD-IHIDGIVF 218 (270)
T ss_pred CCCCEEEEECCCCCcCC-----------HHHHHHHHHHHhhhCCCeEEEEEcCccCHHHHHHHHHHhCC-CCCCEEEE
Confidence 47999999999874321 23344444444333333334455567788888788777654 34788876
No 339
>KOG0635 consensus Adenosine 5'-phosphosulfate kinase [Inorganic ion transport and metabolism]
Probab=29.73 E-value=1.4e+02 Score=23.77 Aligned_cols=39 Identities=13% Similarity=0.279 Sum_probs=30.8
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeC
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNS 150 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~ 150 (407)
.+..+|.+-|+.|+..+...=.+.+.|+.+|--.+.+|-
T Consensus 29 qkGcviWiTGLSgSGKStlACaL~q~L~qrgkl~Y~LDG 67 (207)
T KOG0635|consen 29 QKGCVIWITGLSGSGKSTLACALSQALLQRGKLTYILDG 67 (207)
T ss_pred CCCcEEEEeccCCCCchhHHHHHHHHHHhcCceEEEecC
Confidence 567899999999888765545566678889988888874
No 340
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=29.32 E-value=4.3e+02 Score=23.81 Aligned_cols=38 Identities=24% Similarity=0.396 Sum_probs=26.2
Q ss_pred EEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCC
Q 015401 115 VLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRG 152 (407)
Q Consensus 115 ~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG 152 (407)
++++++|+..+..+.+...++..|.+.|+.|.++...+
T Consensus 2 il~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~ 39 (360)
T cd04951 2 ILYVITGLGLGGAEKQVVDLADQFVAKGHQVAIISLTG 39 (360)
T ss_pred eEEEecCCCCCCHHHHHHHHHHhcccCCceEEEEEEeC
Confidence 45566665433444666788888888999998886554
No 341
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=29.11 E-value=1.6e+02 Score=23.07 Aligned_cols=69 Identities=12% Similarity=0.086 Sum_probs=38.1
Q ss_pred CCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEEE
Q 015401 120 PGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVG 192 (407)
Q Consensus 120 HG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG 192 (407)
.|+.|.........+...+......++++.. |.-... .....+.+.+.+..+++.++...|+.++++++
T Consensus 18 ~g~~G~~~~~~~~~~~~~~~~~~pd~vvi~~-G~ND~~---~~~~~~~~~~~~~~~i~~i~~~~p~~~ii~~~ 86 (157)
T cd01833 18 EGHSGYLIDQIAAAAADWVLAAKPDVVLLHL-GTNDLV---LNRDPDTAPDRLRALIDQMRAANPDVKIIVAT 86 (157)
T ss_pred CCCCCccHHHHHHHhhhccccCCCCEEEEec-cCcccc---cCCCHHHHHHHHHHHHHHHHHhCCCeEEEEEe
Confidence 5665554433323332334445666777754 222111 11234566788889999988877766666554
No 342
>COG1341 Predicted GTPase or GTP-binding protein [General function prediction only]
Probab=29.02 E-value=1.2e+02 Score=28.53 Aligned_cols=49 Identities=12% Similarity=0.325 Sum_probs=36.4
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCC
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTP 161 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~ 161 (407)
..+.++++=|-.++..+.....++..+.++||+|..+|.= -|.++...|
T Consensus 71 ~~~~~vmvvG~vDSGKSTLt~~LaN~~l~rG~~v~iiDaD-vGQ~ei~pP 119 (398)
T COG1341 71 GKVGVVMVVGPVDSGKSTLTTYLANKLLARGRKVAIIDAD-VGQSEIGPP 119 (398)
T ss_pred cCCcEEEEECCcCcCHHHHHHHHHHHHhhcCceEEEEeCC-CCCcccCCC
Confidence 5566777777667777777778888899999999999973 555654333
No 343
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=28.89 E-value=1.6e+02 Score=23.81 Aligned_cols=49 Identities=16% Similarity=0.192 Sum_probs=24.0
Q ss_pred HhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEEE
Q 015401 139 RSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVG 192 (407)
Q Consensus 139 ~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG 192 (407)
+.....++++.+ |.-... ....+.+.+.+.+..+++.++. ++.++++++
T Consensus 64 ~~~~~d~vii~~-G~ND~~--~~~~~~~~~~~~~~~~i~~i~~--~~~~vil~~ 112 (185)
T cd01832 64 LALRPDLVTLLA-GGNDIL--RPGTDPDTYRADLEEAVRRLRA--AGARVVVFT 112 (185)
T ss_pred HhcCCCEEEEec-cccccc--cCCCCHHHHHHHHHHHHHHHHh--CCCEEEEec
Confidence 344566666644 221111 1123344556667777777762 333555553
No 344
>TIGR00682 lpxK tetraacyldisaccharide 4'-kinase. Also called lipid-A 4'-kinase. This essential gene encodes an enzyme in the pathway of lipid A biosynthesis in Gram-negative organisms. A single copy of this protein is found in Gram-negative bacteria. PSI-BLAST converges on this set of apparent orthologs without identifying any other homologs.
Probab=28.73 E-value=1.5e+02 Score=26.92 Aligned_cols=41 Identities=24% Similarity=0.436 Sum_probs=29.2
Q ss_pred EEEeCC--CCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCC
Q 015401 116 LILMPG--LTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSP 157 (407)
Q Consensus 116 vv~lHG--~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~ 157 (407)
||.+-. .+|+........++..+.++|+++.++ .||||+..
T Consensus 30 VIsVGNitvGGTGKTP~v~~La~~l~~~G~~~~Il-SRGYg~~~ 72 (311)
T TIGR00682 30 VVIVGNLSVGGTGKTPVVVWLAELLKDRGLRVGVL-SRGYGSKT 72 (311)
T ss_pred EEEEeccccCCcChHHHHHHHHHHHHHCCCEEEEE-CCCCCCCC
Confidence 455553 234445567778888899999998776 57999864
No 345
>PRK13973 thymidylate kinase; Provisional
Probab=28.56 E-value=1.4e+02 Score=25.20 Aligned_cols=39 Identities=26% Similarity=0.428 Sum_probs=33.2
Q ss_pred cEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCC
Q 015401 114 PVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRG 152 (407)
Q Consensus 114 p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG 152 (407)
..+|.+=|..|+........+...|.+.|+.|+....||
T Consensus 3 g~~IviEG~dGsGKtTq~~~l~~~l~~~g~~~~~~~~p~ 41 (213)
T PRK13973 3 GRFITFEGGEGAGKSTQIRLLAERLRAAGYDVLVTREPG 41 (213)
T ss_pred ceEEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEEECCC
Confidence 357777898888887777888888989999999999997
No 346
>TIGR03371 cellulose_yhjQ cellulose synthase operon protein YhjQ. Members of this family are the YhjQ protein, found immediately upsteam of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae. In several species it is seen clearly as part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm (PubMed:16930487), based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=28.55 E-value=1.1e+02 Score=26.35 Aligned_cols=40 Identities=10% Similarity=0.076 Sum_probs=28.6
Q ss_pred EEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCC
Q 015401 115 VLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCG 154 (407)
Q Consensus 115 ~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G 154 (407)
+|.+..+-+|...+...-.++..+...|++|+++|.=..|
T Consensus 3 iI~v~s~KGGvGKTt~a~nla~~la~~g~~VlliD~D~q~ 42 (246)
T TIGR03371 3 VIAIVGVKGGVGKTTLTANLASALKLLGEPVLAIDLDPQN 42 (246)
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEeCCCcc
Confidence 4555555555555555667777888899999999986554
No 347
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=28.55 E-value=1e+02 Score=25.03 Aligned_cols=34 Identities=18% Similarity=0.082 Sum_probs=23.4
Q ss_pred HHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccC
Q 015401 174 EVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHES 208 (407)
Q Consensus 174 ~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p 208 (407)
.+++.+... ....=.++|.|.|+.++..++....
T Consensus 17 Gvl~~L~e~-g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 17 GVLRALEEE-GIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHHHHHC-CCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 344444433 2225589999999999999987654
No 348
>PF05707 Zot: Zonular occludens toxin (Zot); InterPro: IPR008900 This entry consists of bacterial and viral proteins which are very similar to the Zonular occludens toxin (Zot). Zot is elaborated by bacteriophage present in toxigenic strains of Vibrio cholerae. Zot is a single polypeptide chain of 44.8 kDa, with the ability to reversibly alter intestinal epithelial tight junctions, allowing the passage of macromolecules through mucosal barriers.; PDB: 2R2A_B.
Probab=28.26 E-value=65 Score=26.78 Aligned_cols=38 Identities=26% Similarity=0.415 Sum_probs=19.9
Q ss_pred EEEeCCCCCCCccHHHHHH-HHHHHhCCcEEEEEeCCCCC
Q 015401 116 LILMPGLTGGSEDSYVRHM-LLRARSKGWRVVVFNSRGCG 154 (407)
Q Consensus 116 vv~lHG~~g~~~~~~~~~~-~~~l~~~g~~vi~~D~rG~G 154 (407)
|.++.|.+|+..+.+.-.. +...+++|..|++ |.+|.-
T Consensus 2 I~~~~G~pGsGKS~~av~~~i~~~l~~gr~V~t-ni~gL~ 40 (193)
T PF05707_consen 2 IYLITGKPGSGKSYYAVSYVIIPALKKGRPVYT-NIPGLN 40 (193)
T ss_dssp EEEEE--TTSSHHHHHHHHHHH-GGGS---EEE---TTB-
T ss_pred EEEEEcCCCCcHhHHHHHHHHHHHHhCCCEEEE-ccCCcc
Confidence 7789999998875443333 5556678878877 988764
No 349
>PF08433 KTI12: Chromatin associated protein KTI12 ; InterPro: IPR013641 This is a family of chromatin associated proteins which interact with the Elongator complex, a component of the elongating form of RNA polymerase II []. The Elongator complex has histone acetyltransferase activity. ; PDB: 3ADB_B 3ADC_B 3A4M_B 3A4N_B 3AM1_A 3A4L_B 3ADD_A.
Probab=28.15 E-value=84 Score=27.87 Aligned_cols=40 Identities=23% Similarity=0.357 Sum_probs=27.6
Q ss_pred EEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCC
Q 015401 115 VLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCG 154 (407)
Q Consensus 115 ~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G 154 (407)
++|++-|++|+........+...+.+.++.|+.++--..+
T Consensus 2 pLiil~G~P~SGKTt~a~~L~~~~~~~~~~v~~i~~~~~~ 41 (270)
T PF08433_consen 2 PLIILCGLPCSGKTTRAKELKKYLEEKGKEVVIISDDSLG 41 (270)
T ss_dssp -EEEEE--TTSSHHHHHHHHHHHHHHTT--EEEE-THHHH
T ss_pred EEEEEEcCCCCcHHHHHHHHHHHHHhcCCEEEEEcccccc
Confidence 4888999999988777778888888899999999865444
No 350
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=27.91 E-value=67 Score=27.72 Aligned_cols=35 Identities=14% Similarity=-0.083 Sum_probs=23.3
Q ss_pred HHHHHHHhh-CCCCcEEEEEechhHHHHHHHHhccC
Q 015401 174 EVVAHVGSK-YPKAHLYAVGWSLGANILIRYLGHES 208 (407)
Q Consensus 174 ~~l~~l~~~-~~~~~v~lvG~S~Gg~ia~~~a~~~p 208 (407)
-+++.|..+ .....-.++|-|.|+.++..|+....
T Consensus 16 GVl~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 16 GVLSLLIEAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 345555443 11113479999999999999987654
No 351
>PRK09435 membrane ATPase/protein kinase; Provisional
Probab=27.81 E-value=1.3e+02 Score=27.57 Aligned_cols=39 Identities=15% Similarity=0.363 Sum_probs=31.5
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeC
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNS 150 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~ 150 (407)
+++.+|-+.|.+|+..+.+...++..+...|++|.++..
T Consensus 54 ~~~~~igi~G~~GaGKSTl~~~l~~~l~~~g~~v~vi~~ 92 (332)
T PRK09435 54 GNALRIGITGVPGVGKSTFIEALGMHLIEQGHKVAVLAV 92 (332)
T ss_pred CCcEEEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEe
Confidence 567899999999999888888888888888877655543
No 352
>PF05673 DUF815: Protein of unknown function (DUF815); InterPro: IPR008533 This domain consists of several bacterial proteins of unknown function.
Probab=27.54 E-value=1e+02 Score=26.79 Aligned_cols=35 Identities=23% Similarity=0.385 Sum_probs=28.0
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeC
Q 015401 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNS 150 (407)
Q Consensus 116 vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~ 150 (407)
=++++|-.|+..++.++.+...+..+|.++|-++-
T Consensus 54 nvLL~G~rGtGKSSlVkall~~y~~~GLRlIev~k 88 (249)
T PF05673_consen 54 NVLLWGARGTGKSSLVKALLNEYADQGLRLIEVSK 88 (249)
T ss_pred ceEEecCCCCCHHHHHHHHHHHHhhcCceEEEECH
Confidence 45668888888888888888888889988887754
No 353
>PRK07667 uridine kinase; Provisional
Probab=27.38 E-value=1.6e+02 Score=24.47 Aligned_cols=42 Identities=12% Similarity=0.334 Sum_probs=32.7
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCC
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGC 153 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~ 153 (407)
..+.||.+-|..|+..+.....+...+.+.|..+.+++...+
T Consensus 15 ~~~~iIgI~G~~gsGKStla~~L~~~l~~~~~~~~~i~~Dd~ 56 (193)
T PRK07667 15 ENRFILGIDGLSRSGKTTFVANLKENMKQEGIPFHIFHIDDY 56 (193)
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHhCCCcEEEEEcCcc
Confidence 345899999999988877777777777778888777777664
No 354
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=27.30 E-value=4.9e+02 Score=23.97 Aligned_cols=83 Identities=12% Similarity=0.171 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCC--CcEEEEEechhHHHHHHHHhc
Q 015401 129 SYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPK--AHLYAVGWSLGANILIRYLGH 206 (407)
Q Consensus 129 ~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~--~~v~lvG~S~Gg~ia~~~a~~ 206 (407)
.....-+....++||.|+.+|--|.=. +...+.+.+..+.+-++...++ ..+.++.-+.-|.-++.=|..
T Consensus 208 aVafDAi~~Akar~~DvvliDTAGRLh--------nk~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAttGqnal~QAk~ 279 (340)
T COG0552 208 AVAFDAIQAAKARGIDVVLIDTAGRLH--------NKKNLMDELKKIVRVIKKDDPDAPHEILLVLDATTGQNALSQAKI 279 (340)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCccccc--------CchhHHHHHHHHHHHhccccCCCCceEEEEEEcccChhHHHHHHH
Confidence 344566677788999999999876422 2345577788877777776543 247777788888888888888
Q ss_pred cCCCCCceeEEEE
Q 015401 207 ESHSCPLSGAVSL 219 (407)
Q Consensus 207 ~p~~~~v~~~v~l 219 (407)
+.+..++.|+|+-
T Consensus 280 F~eav~l~GiIlT 292 (340)
T COG0552 280 FNEAVGLDGIILT 292 (340)
T ss_pred HHHhcCCceEEEE
Confidence 8776668888873
No 355
>PF08248 Tryp_FSAP: Tryptophyllin-3 skin active peptide; InterPro: IPR013266 PdT-3 or Tryptophyllin-3 peptide is a subfamily of the family Tryptophyllin and of the superfamily FSAP (Frog Skin Active Peptide). Originally identified in skin extracts of Neotropical leaf frogs, Phyllomedusa sp. This subfamily has an average length of 13 amino acids. The pharmacological activity of the tryptophyllins remains to be established [] but it seems that these peptides possess an action on liver protein synthesis and body weight []. It is thought to possesses insulin-releasing activity [].
Probab=27.18 E-value=42 Score=13.76 Aligned_cols=8 Identities=38% Similarity=1.107 Sum_probs=4.9
Q ss_pred CCCcCCCC
Q 015401 54 RPYSPFPV 61 (407)
Q Consensus 54 ~~y~p~p~ 61 (407)
+||.|+|.
T Consensus 2 kpfw~ppi 9 (12)
T PF08248_consen 2 KPFWPPPI 9 (12)
T ss_pred CccCCCCc
Confidence 46666664
No 356
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=27.13 E-value=64 Score=27.74 Aligned_cols=28 Identities=36% Similarity=0.392 Sum_probs=18.9
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeC
Q 015401 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNS 150 (407)
Q Consensus 116 vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~ 150 (407)
=||++|- |.+.+ +..|+++||+|+.+|+
T Consensus 46 rvLvPgC-Gkg~D------~~~LA~~G~~V~GvDl 73 (226)
T PRK13256 46 VCLIPMC-GCSID------MLFFLSKGVKVIGIEL 73 (226)
T ss_pred eEEEeCC-CChHH------HHHHHhCCCcEEEEec
Confidence 4566663 33322 2357889999999998
No 357
>PRK01906 tetraacyldisaccharide 4'-kinase; Provisional
Probab=26.68 E-value=2e+02 Score=26.56 Aligned_cols=42 Identities=21% Similarity=0.328 Sum_probs=29.4
Q ss_pred EEEEeCC--CCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCC
Q 015401 115 VLILMPG--LTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSP 157 (407)
Q Consensus 115 ~vv~lHG--~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~ 157 (407)
+||.+-. .+|+........++..+.++|+++.++ .||+|+..
T Consensus 57 PVIsVGNitvGGTGKTP~v~~La~~l~~~G~~~~Il-SRGYg~~~ 100 (338)
T PRK01906 57 PVVVVGNVTVGGTGKTPTVIALVDALRAAGFTPGVV-SRGYGAKI 100 (338)
T ss_pred CEEEECCccCCCCChHHHHHHHHHHHHHcCCceEEE-ecCCCCCC
Confidence 3555554 334445567778888888999998666 58999864
No 358
>cd02037 MRP-like MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily. Like the other members of the superfamily, MRP contains a ATP-binding domain at the N-termini. It is found in bacteria as a membrane-spanning protein and functions as a Na+/H+ antiporter.
Probab=26.53 E-value=1.3e+02 Score=24.19 Aligned_cols=39 Identities=18% Similarity=0.344 Sum_probs=25.8
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCC
Q 015401 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCG 154 (407)
Q Consensus 116 vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G 154 (407)
|.+..+-+|...+...-.++..+.+.|++|+.+|.=-.|
T Consensus 2 i~v~s~kgG~GKTt~a~~LA~~la~~g~~vllvD~D~q~ 40 (169)
T cd02037 2 IAVMSGKGGVGKSTVAVNLALALAKLGYKVGLLDADIYG 40 (169)
T ss_pred EEEecCCCcCChhHHHHHHHHHHHHcCCcEEEEeCCCCC
Confidence 344455455555455567777788899999999874333
No 359
>cd02034 CooC The accessory protein CooC, which contains a nucleotide-binding domain (P-loop) near the N-terminus, participates in the maturation of the nickel center of carbon monoxide dehydrogenase (CODH). CODH from Rhodospirillum rubrum catalyzes the reversible oxidation of CO to CO2. CODH contains a nickel-iron-sulfur cluster (C-center) and an iron-sulfur cluster (B-center). CO oxidation occurs at the C-center. Three accessory proteins encoded by cooCTJ genes are involved in nickel incorporation into a nickel site. CooC functions as a nickel insertase that mobilizes nickel to apoCODH using energy released from ATP hydrolysis. CooC is a homodimer and has NTPase activities. Mutation at the P-loop abolishs its function.
Probab=26.40 E-value=1.3e+02 Score=22.63 Aligned_cols=34 Identities=18% Similarity=0.228 Sum_probs=24.2
Q ss_pred EEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeC
Q 015401 117 ILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNS 150 (407)
Q Consensus 117 v~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~ 150 (407)
|++-|-+|...+.....++..+.++|.+|+++|.
T Consensus 2 i~~~GkgG~GKTt~a~~la~~l~~~g~~V~~id~ 35 (116)
T cd02034 2 IAITGKGGVGKTTIAALLARYLAEKGKPVLAIDA 35 (116)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEC
Confidence 4455666666655556666777788999999985
No 360
>PRK10867 signal recognition particle protein; Provisional
Probab=26.24 E-value=1.3e+02 Score=28.90 Aligned_cols=39 Identities=21% Similarity=0.400 Sum_probs=30.6
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhC-CcEEEEEeC
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSK-GWRVVVFNS 150 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~-g~~vi~~D~ 150 (407)
..|.+|++-|..|+........++..+..+ |+.|..+|.
T Consensus 98 ~~p~vI~~vG~~GsGKTTtaakLA~~l~~~~G~kV~lV~~ 137 (433)
T PRK10867 98 KPPTVIMMVGLQGAGKTTTAGKLAKYLKKKKKKKVLLVAA 137 (433)
T ss_pred CCCEEEEEECCCCCcHHHHHHHHHHHHHHhcCCcEEEEEc
Confidence 457888888999988877777888878777 887766654
No 361
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=26.14 E-value=2.3e+02 Score=22.17 Aligned_cols=28 Identities=14% Similarity=0.133 Sum_probs=20.6
Q ss_pred ccHHHHHHHHHHHhCCcEEEEEeCCCCC
Q 015401 127 EDSYVRHMLLRARSKGWRVVVFNSRGCG 154 (407)
Q Consensus 127 ~~~~~~~~~~~l~~~g~~vi~~D~rG~G 154 (407)
.+.+...++..+.++|++|.++-...-+
T Consensus 14 ~e~~~~~l~~~l~~~G~~v~v~~~~~~~ 41 (177)
T PF13439_consen 14 AERVVLNLARALAKRGHEVTVVSPGVKD 41 (177)
T ss_dssp HHHHHHHHHHHHHHTT-EEEEEESS-TT
T ss_pred HHHHHHHHHHHHHHCCCEEEEEEcCCCc
Confidence 4477889999999999999999555433
No 362
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=26.12 E-value=85 Score=30.57 Aligned_cols=40 Identities=13% Similarity=0.319 Sum_probs=35.2
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCC
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSR 151 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~r 151 (407)
..|+||++-|+-++....-+..+...+..+||+|+.+--|
T Consensus 297 ~~~vlivfeG~DaAGKgg~I~rl~~~ldPrg~~v~~~~~P 336 (493)
T TIGR03708 297 KRSLVLVFEGWDAAGKGGAIRRVTEALDARQYRVVPIAAP 336 (493)
T ss_pred CCCEEEEEEcccCCCCcHHHHHHHhhcCCCeeEEEeCCCc
Confidence 6799999999988888888899998898999999998665
No 363
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=25.99 E-value=1.3e+02 Score=27.53 Aligned_cols=37 Identities=19% Similarity=0.388 Sum_probs=32.2
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEE
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVF 148 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~ 148 (407)
++|.|+++=|..|.....-+..++..+.++|++|+..
T Consensus 137 ~~p~Vil~vGVNG~GKTTTIaKLA~~l~~~g~~Vlla 173 (340)
T COG0552 137 KKPFVILFVGVNGVGKTTTIAKLAKYLKQQGKSVLLA 173 (340)
T ss_pred CCcEEEEEEecCCCchHhHHHHHHHHHHHCCCeEEEE
Confidence 6799999999988887667788999999999999875
No 364
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=25.94 E-value=95 Score=25.98 Aligned_cols=75 Identities=15% Similarity=0.219 Sum_probs=40.0
Q ss_pred HHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCCC
Q 015401 132 RHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSC 211 (407)
Q Consensus 132 ~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~ 211 (407)
......+.++++.++.+|-+|....+ ....+++..+++.+. +. .+++|=-+..+.-.+..+..+-+..
T Consensus 73 ~~~l~~~~~~~~D~vlIDT~Gr~~~d--------~~~~~el~~~~~~~~---~~-~~~LVlsa~~~~~~~~~~~~~~~~~ 140 (196)
T PF00448_consen 73 REALEKFRKKGYDLVLIDTAGRSPRD--------EELLEELKKLLEALN---PD-EVHLVLSATMGQEDLEQALAFYEAF 140 (196)
T ss_dssp HHHHHHHHHTTSSEEEEEE-SSSSTH--------HHHHHHHHHHHHHHS---SS-EEEEEEEGGGGGHHHHHHHHHHHHS
T ss_pred HHHHHHHhhcCCCEEEEecCCcchhh--------HHHHHHHHHHhhhcC---Cc-cceEEEecccChHHHHHHHHHhhcc
Confidence 34445566789999999999875321 222344555555552 33 5555554444444544443332222
Q ss_pred CceeEEE
Q 015401 212 PLSGAVS 218 (407)
Q Consensus 212 ~v~~~v~ 218 (407)
++.++|+
T Consensus 141 ~~~~lIl 147 (196)
T PF00448_consen 141 GIDGLIL 147 (196)
T ss_dssp STCEEEE
T ss_pred cCceEEE
Confidence 2777775
No 365
>cd02033 BchX Chlorophyllide reductase converts chlorophylls into bacteriochlorophylls by reducing the chlorin B-ring. This family contains the X subunit of this three-subunit enzyme. Sequence and structure similarity between bchX, protochlorophyllide reductase L subunit (bchL and chlL) and nitrogenase Fe protein (nifH gene) suggest their functional similarity. Members of the BchX family serve as the unique electron donors to their respective catalytic subunits (bchN-bchB, bchY-bchZ and nitrogenase component 1). Mechanistically, they hydrolyze ATP and transfer electrons through a Fe4-S4 cluster.
Probab=25.90 E-value=1.7e+02 Score=26.93 Aligned_cols=40 Identities=15% Similarity=0.209 Sum_probs=28.4
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCC
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSR 151 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~r 151 (407)
.+..+|.+.|-+|...+.....++..+...|++|+.+|.-
T Consensus 29 ~~~~ii~v~gkgG~GKSt~a~nLa~~la~~g~rVllid~D 68 (329)
T cd02033 29 KKTQIIAIYGKGGIGKSFTLANLSYMMAQQGKRVLLIGCD 68 (329)
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEee
Confidence 3445565568777666555667777788899999888763
No 366
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=25.85 E-value=73 Score=27.06 Aligned_cols=33 Identities=18% Similarity=0.032 Sum_probs=23.4
Q ss_pred HHHHHHhhCCCCcEEEEEechhHHHHHHHHhccC
Q 015401 175 VVAHVGSKYPKAHLYAVGWSLGANILIRYLGHES 208 (407)
Q Consensus 175 ~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p 208 (407)
+++.|.... ...-.++|.|.|+.++..++...+
T Consensus 16 vl~aL~e~g-~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 16 VLKALAEAG-IEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHcC-CCCCEEEEECHHHHHHHHHHcCCc
Confidence 444444431 225589999999999999997764
No 367
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=25.73 E-value=86 Score=30.98 Aligned_cols=28 Identities=21% Similarity=0.323 Sum_probs=22.6
Q ss_pred hhCCCCcEEEEEechhHHHHHHHHhccC
Q 015401 181 SKYPKAHLYAVGWSLGANILIRYLGHES 208 (407)
Q Consensus 181 ~~~~~~~v~lvG~S~Gg~ia~~~a~~~p 208 (407)
..++-.+-.++|||+|=+.|+..|+-..
T Consensus 260 ~~~GI~Pdav~GHSlGE~aAa~aAGvls 287 (538)
T TIGR02816 260 DEFAIKPDFALGYSKGEASMWASLGVWK 287 (538)
T ss_pred HhcCCCCCEEeecCHHHHHHHHHhCCCC
Confidence 3456668899999999999988887654
No 368
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=25.69 E-value=2.5e+02 Score=22.89 Aligned_cols=28 Identities=21% Similarity=0.393 Sum_probs=18.9
Q ss_pred cCCChhHHHHHHHHHHhhCCCCcEEEEE
Q 015401 165 SASFLGDMQEVVAHVGSKYPKAHLYAVG 192 (407)
Q Consensus 165 ~~~~~~Dl~~~l~~l~~~~~~~~v~lvG 192 (407)
.+.+.+++..+++.++...++.++++++
T Consensus 86 ~~~~~~~l~~li~~i~~~~~~~~iiv~~ 113 (191)
T cd01836 86 IARWRKQLAELVDALRAKFPGARVVVTA 113 (191)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCEEEEEC
Confidence 3456677777888877766666666654
No 369
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=25.47 E-value=2e+02 Score=27.49 Aligned_cols=76 Identities=12% Similarity=0.203 Sum_probs=52.0
Q ss_pred HHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCCC
Q 015401 132 RHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSC 211 (407)
Q Consensus 132 ~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~ 211 (407)
..-+..+...+|.|+.+|-.|.=.- .+.+.+.+.++-+.+.. ..+.+|--||=|.-|...|..+.+..
T Consensus 172 k~al~~ak~~~~DvvIvDTAGRl~i--------de~Lm~El~~Ik~~~~P----~E~llVvDam~GQdA~~~A~aF~e~l 239 (451)
T COG0541 172 KAALEKAKEEGYDVVIVDTAGRLHI--------DEELMDELKEIKEVINP----DETLLVVDAMIGQDAVNTAKAFNEAL 239 (451)
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccc--------cHHHHHHHHHHHhhcCC----CeEEEEEecccchHHHHHHHHHhhhc
Confidence 4445566778899999998764211 12233344444333333 38889999999999999999888877
Q ss_pred CceeEEEE
Q 015401 212 PLSGAVSL 219 (407)
Q Consensus 212 ~v~~~v~l 219 (407)
+|.++|+-
T Consensus 240 ~itGvIlT 247 (451)
T COG0541 240 GITGVILT 247 (451)
T ss_pred CCceEEEE
Confidence 78888874
No 370
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=25.21 E-value=1.2e+02 Score=26.48 Aligned_cols=20 Identities=25% Similarity=0.016 Sum_probs=17.4
Q ss_pred EEEEechhHHHHHHHHhccC
Q 015401 189 YAVGWSLGANILIRYLGHES 208 (407)
Q Consensus 189 ~lvG~S~Gg~ia~~~a~~~p 208 (407)
.+.|-|.|+.++..++...+
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 33 KISGASAGALAACCLLCDLP 52 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCc
Confidence 39999999999999987654
No 371
>PF13191 AAA_16: AAA ATPase domain; PDB: 2V1U_A.
Probab=25.12 E-value=91 Score=25.21 Aligned_cols=42 Identities=29% Similarity=0.446 Sum_probs=24.6
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCC
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGC 153 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~ 153 (407)
..+.+++++|-.|...+.....+...+...+..++..+....
T Consensus 22 ~~~~~~ll~G~~G~GKT~ll~~~~~~~~~~~~~~~~~~~~~~ 63 (185)
T PF13191_consen 22 GSPRNLLLTGESGSGKTSLLRALLDRLAERGGYVISINCDDS 63 (185)
T ss_dssp -----EEE-B-TTSSHHHHHHHHHHHHHHHT--EEEEEEETT
T ss_pred CCCcEEEEECCCCCCHHHHHHHHHHHHHhcCCEEEEEEEecc
Confidence 557899999999988877777777777665444777776544
No 372
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=24.94 E-value=3.5e+02 Score=22.65 Aligned_cols=62 Identities=11% Similarity=0.084 Sum_probs=37.2
Q ss_pred HHHHhCCc-EEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEEEech----hHHHHHHHHhccCC
Q 015401 136 LRARSKGW-RVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSL----GANILIRYLGHESH 209 (407)
Q Consensus 136 ~~l~~~g~-~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~----Gg~ia~~~a~~~p~ 209 (407)
..+...|. +|+..|..+... +..+.+++-+.++++... ..++++|+|. |..++..+|++..-
T Consensus 70 ~~l~~~G~d~V~~~~~~~~~~-------~~~e~~a~al~~~i~~~~-----p~lVL~~~t~~~~~grdlaprlAarLga 136 (202)
T cd01714 70 REALAMGADRAILVSDRAFAG-------ADTLATAKALAAAIKKIG-----VDLILTGKQSIDGDTGQVGPLLAELLGW 136 (202)
T ss_pred HHHHHcCCCEEEEEecccccC-------CChHHHHHHHHHHHHHhC-----CCEEEEcCCcccCCcCcHHHHHHHHhCC
Confidence 34455676 688877664432 222233333333333322 2799999998 88899888887654
No 373
>PRK05506 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; Provisional
Probab=24.80 E-value=1.1e+02 Score=30.97 Aligned_cols=38 Identities=16% Similarity=0.372 Sum_probs=30.3
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEe
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFN 149 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D 149 (407)
.+|.+|++.|+.|+..+...+.+...+...|..++.+|
T Consensus 458 ~~~~~i~~~G~~gsGKst~a~~l~~~l~~~~~~~~~l~ 495 (632)
T PRK05506 458 QKPATVWFTGLSGSGKSTIANLVERRLHALGRHTYLLD 495 (632)
T ss_pred CCcEEEEecCCCCchHHHHHHHHHHHHHHcCCCEEEEc
Confidence 46899999999998887777777777766777777775
No 374
>PRK05568 flavodoxin; Provisional
Probab=24.76 E-value=3.3e+02 Score=20.95 Aligned_cols=78 Identities=21% Similarity=0.248 Sum_probs=40.2
Q ss_pred EEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCC--------CCCcccCCC--hhHHHHHHHHHHhhCC
Q 015401 115 VLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVT--------TPQFYSASF--LGDMQEVVAHVGSKYP 184 (407)
Q Consensus 115 ~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~--------~~~~~~~~~--~~Dl~~~l~~l~~~~~ 184 (407)
++|+.+-..|+.. .....+...+.+.|..|-++|..-.-.+... .+.+ .... ...+..+++.+.....
T Consensus 4 ~~IvY~S~~GnT~-~~a~~i~~~~~~~g~~v~~~~~~~~~~~~~~~~d~iilgsp~y-~~~~~~~~~~~~f~~~~~~~~~ 81 (142)
T PRK05568 4 INIIYWSGTGNTE-AMANLIAEGAKENGAEVKLLNVSEASVDDVKGADVVALGSPAM-GDEVLEEGEMEPFVESISSLVK 81 (142)
T ss_pred EEEEEECCCchHH-HHHHHHHHHHHHCCCeEEEEECCCCCHHHHHhCCEEEEECCcc-CcccccchhHHHHHHHhhhhhC
Confidence 3444444455443 4445555556677888888887643211110 0111 1111 1345666666654445
Q ss_pred CCcEEEEEec
Q 015401 185 KAHLYAVGWS 194 (407)
Q Consensus 185 ~~~v~lvG~S 194 (407)
++++.++|.+
T Consensus 82 ~k~~~~f~t~ 91 (142)
T PRK05568 82 GKKLVLFGSY 91 (142)
T ss_pred CCEEEEEEcc
Confidence 5677777763
No 375
>cd07021 Clp_protease_NfeD_like Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentiall
Probab=24.60 E-value=3.6e+02 Score=22.14 Aligned_cols=78 Identities=21% Similarity=0.287 Sum_probs=39.1
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcE-EEEEec
Q 015401 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHL-YAVGWS 194 (407)
Q Consensus 116 vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v-~lvG~S 194 (407)
+|-+.|--......++...+....+.+...+++..-.-|++ ......+++.+... +..-+ ++-|..
T Consensus 3 vi~i~g~I~~~~~~~l~~~l~~a~~~~~~~ivl~inspGG~------------v~~~~~I~~~l~~~-~~pvva~V~g~A 69 (178)
T cd07021 3 VIPIEGEIDPGLAAFVERALKEAKEEGADAVVLDIDTPGGR------------VDSALEIVDLILNS-PIPTIAYVNDRA 69 (178)
T ss_pred EEEEeeEECHHHHHHHHHHHHHHHhCCCCeEEEEEECcCCC------------HHHHHHHHHHHHhC-CCCEEEEECCch
Confidence 45566643322224445555555566555555555333322 45666777777653 22122 333655
Q ss_pred hhHHHHHHHHhc
Q 015401 195 LGANILIRYLGH 206 (407)
Q Consensus 195 ~Gg~ia~~~a~~ 206 (407)
.||...+.+++.
T Consensus 70 aSaG~~ia~a~d 81 (178)
T cd07021 70 ASAGALIALAAD 81 (178)
T ss_pred HHHHHHHHHhCC
Confidence 555555555544
No 376
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=24.56 E-value=3.6e+02 Score=23.35 Aligned_cols=74 Identities=19% Similarity=0.213 Sum_probs=40.5
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCccc--CCChhHHHHHHHHHHhhCCCCcEEEEEe
Q 015401 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYS--ASFLGDMQEVVAHVGSKYPKAHLYAVGW 193 (407)
Q Consensus 116 vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~--~~~~~Dl~~~l~~l~~~~~~~~v~lvG~ 193 (407)
+++|-|..++- -..++..|.++|++|+..+...-..... ...... -...+++..+++.+...++ ++.++=|
T Consensus 11 ~vlItG~s~gI----G~~la~~l~~~G~~v~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g--~id~li~ 83 (266)
T PRK06171 11 IIIVTGGSSGI----GLAIVKELLANGANVVNADIHGGDGQHE-NYQFVPTDVSSAEEVNHTVAEIIEKFG--RIDGLVN 83 (266)
T ss_pred EEEEeCCCChH----HHHHHHHHHHCCCEEEEEeCCccccccC-ceEEEEccCCCHHHHHHHHHHHHHHcC--CCCEEEE
Confidence 45666654433 2466778889999999998654221110 000111 1224577778887776654 3334444
Q ss_pred chh
Q 015401 194 SLG 196 (407)
Q Consensus 194 S~G 196 (407)
..|
T Consensus 84 ~Ag 86 (266)
T PRK06171 84 NAG 86 (266)
T ss_pred CCc
Confidence 444
No 377
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=24.45 E-value=1.3e+02 Score=24.42 Aligned_cols=27 Identities=11% Similarity=0.258 Sum_probs=18.3
Q ss_pred cCCChhHHHHHHHHHHhhCCCCcEEEE
Q 015401 165 SASFLGDMQEVVAHVGSKYPKAHLYAV 191 (407)
Q Consensus 165 ~~~~~~Dl~~~l~~l~~~~~~~~v~lv 191 (407)
.+.+.+.+..+++.++...+..+++++
T Consensus 84 ~~~~~~~l~~~v~~~~~~~~~~~ii~~ 110 (191)
T cd01834 84 LEKFKTNLRRLIDRLKNKESAPRIVLV 110 (191)
T ss_pred HHHHHHHHHHHHHHHHcccCCCcEEEE
Confidence 455667788888888755555566665
No 378
>cd03115 SRP The signal recognition particle (SRP) mediates the transport to or across the plasma membrane in bacteria and the endoplasmic reticulum in eukaryotes. SRP recognizes N-terminal sighnal sequences of newly synthesized polypeptides at the ribosome. The SRP-polypeptide complex is then targeted to the membrane by an interaction between SRP and its cognated receptor (SR). In mammals, SRP consists of six protein subunits and a 7SL RNA. One of these subunits is a 54 kd protein (SRP54), which is a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 is a multidomain protein that consists of an N-terminal domain, followed by a central G (GTPase) domain and a C-terminal M domain.
Probab=24.34 E-value=1.5e+02 Score=23.94 Aligned_cols=36 Identities=25% Similarity=0.446 Sum_probs=28.1
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCC
Q 015401 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSR 151 (407)
Q Consensus 116 vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~r 151 (407)
++++-|-+|.........++..+.+.|++|+.+|.-
T Consensus 2 ~~~~~G~~G~GKTt~~~~la~~~~~~g~~v~~i~~D 37 (173)
T cd03115 2 VILLVGLQGVGKTTTAAKLALYLKKKGKKVLLVAAD 37 (173)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEcC
Confidence 566668888888777777887888889999888753
No 379
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=24.09 E-value=1.1e+02 Score=26.81 Aligned_cols=37 Identities=19% Similarity=0.101 Sum_probs=24.4
Q ss_pred HHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCC
Q 015401 174 EVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHS 210 (407)
Q Consensus 174 ~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~ 210 (407)
.+++.+....-...=.++|.|.|+.++..++......
T Consensus 15 Gvl~al~e~~~~~fd~i~GtSaGAi~a~~~~~g~~~~ 51 (266)
T cd07208 15 GVLDAFLEAGIRPFDLVIGVSAGALNAASYLSGQRGR 51 (266)
T ss_pred HHHHHHHHcCCCCCCEEEEECHHHHhHHHHHhCCcch
Confidence 4455554431111338999999999999998776543
No 380
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=24.01 E-value=1e+02 Score=25.04 Aligned_cols=21 Identities=24% Similarity=0.022 Sum_probs=17.8
Q ss_pred cEEEEEechhHHHHHHHHhcc
Q 015401 187 HLYAVGWSLGANILIRYLGHE 207 (407)
Q Consensus 187 ~v~lvG~S~Gg~ia~~~a~~~ 207 (407)
.-.++|.|.|+.++..++...
T Consensus 29 ~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 29 IDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred eeEEEEECHHHHHHHHHHcCC
Confidence 458999999999999998654
No 381
>PHA02518 ParA-like protein; Provisional
Probab=23.95 E-value=1.8e+02 Score=24.15 Aligned_cols=41 Identities=12% Similarity=0.256 Sum_probs=26.7
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCC
Q 015401 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDS 156 (407)
Q Consensus 116 vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S 156 (407)
|.+...=+|.........++..+.++|++|+++|.=-.+.+
T Consensus 3 i~v~~~KGGvGKTT~a~~la~~la~~g~~vlliD~D~q~~~ 43 (211)
T PHA02518 3 IAVLNQKGGAGKTTVATNLASWLHADGHKVLLVDLDPQGSS 43 (211)
T ss_pred EEEEcCCCCCCHHHHHHHHHHHHHhCCCeEEEEeCCCCCCh
Confidence 34444333444444456777788889999999999655533
No 382
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=23.89 E-value=75 Score=26.25 Aligned_cols=36 Identities=14% Similarity=0.298 Sum_probs=23.4
Q ss_pred cEEEEeCCCCCCCc-cHHHHHHHHHHHhCCcEEEEEe
Q 015401 114 PVLILMPGLTGGSE-DSYVRHMLLRARSKGWRVVVFN 149 (407)
Q Consensus 114 p~vv~lHG~~g~~~-~~~~~~~~~~l~~~g~~vi~~D 149 (407)
..||++|....... ...+..++..+.++||+++.++
T Consensus 152 g~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 152 GDIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CCEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 35999994111111 1235777888899999998764
No 383
>PF06858 NOG1: Nucleolar GTP-binding protein 1 (NOG1); InterPro: IPR010674 This domain represents a conserved region of approximately 60 residues in length within nucleolar GTP-binding protein 1 (NOG1). The NOG1 family includes eukaryotic, bacterial and archaeal proteins. In Saccharomyces cerevisiae, the NOG1 gene has been shown to be essential for cell viability, suggesting that NOG1 may play an important role in nucleolar functions. In particular, NOG1 is believed to be functionally linked to ribosome biogenesis, which occurs in the nucleolus. In eukaryotes, NOG1 mutants were found to disrupt the biogenesis of the 60S ribosomal subunit []. The DRG and OBG proteins as well as the prokaryotic NOG-like proteins are homologous throughout their length to the amino half of eukaryotic NOG1, which contains the GTP binding motifs (IPR006073 from INTERPRO); the N-terminal GTP-binding motif is required for function.; GO: 0005525 GTP binding; PDB: 2E87_A.
Probab=23.87 E-value=2.1e+02 Score=18.52 Aligned_cols=40 Identities=5% Similarity=0.140 Sum_probs=26.8
Q ss_pred CCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEE
Q 015401 141 KGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAV 191 (407)
Q Consensus 141 ~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lv 191 (407)
++.-++.+|.-|+.+-+ .++-..+.+.++..+++.+++.|
T Consensus 14 ~~~ilfi~D~Se~CGys-----------ie~Q~~L~~~ik~~F~~~P~i~V 53 (58)
T PF06858_consen 14 ADAILFIIDPSEQCGYS-----------IEEQLSLFKEIKPLFPNKPVIVV 53 (58)
T ss_dssp -SEEEEEE-TT-TTSS------------HHHHHHHHHHHHHHTTTS-EEEE
T ss_pred cceEEEEEcCCCCCCCC-----------HHHHHHHHHHHHHHcCCCCEEEE
Confidence 45667888987754322 67888999999999988787765
No 384
>PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport. Some of them function as molecular chaperones, subunits of proteolytic complexes or independent proteases (FtsH, Lon). They also act as DNA helicases and transcription factors []. AAA ATPases belong to the AAA+ superfamily of ringshaped P-loop NTPases, which act via the energy-dependent unfolding of macromolecules [, ]. There are six major clades of AAA domains (proteasome subunits, metalloproteases, domains D1 and D2 of ATPases with two AAA domains, the MSP1/katanin/spastin group and BCS1 and it homologues), as well as a number of deeply branching minor clades []. They assemble into oligomeric assemblies (often hexamers) that form a ring-shaped structure with a central pore. These proteins produce a molecular motor that couples ATP binding and hydrolysis to changes in conformational states that act upon a target substrate, either translocating or remodelling it []. They are found in all living organisms and share the common feature of the presence of a highly conserved AAA domain called the AAA module. This domain is responsible for ATP binding and hydrolysis. It contains 200-250 residues, among them there are two classical motifs, Walker A (GX4GKT) and Walker B (HyDE) []. The functional variety seen between AAA ATPases is in part due to their extensive number of accessory domains and factors, and to their variable organisation within oligomeric assemblies, in addition to changes in key functional residues within the ATPase domain itself. More information about these proteins can be found at Protein of the Month: AAA ATPases [].; GO: 0005524 ATP binding; PDB: 3H4M_A 1NSF_A 1D2N_A 1HQY_E 1DO0_E 1DO2_C 1G4B_E 1HT1_F 1G4A_F 1HT2_G ....
Probab=23.66 E-value=1.2e+02 Score=22.72 Aligned_cols=56 Identities=14% Similarity=0.262 Sum_probs=34.2
Q ss_pred EEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhh
Q 015401 117 ILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSK 182 (407)
Q Consensus 117 v~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~ 182 (407)
|++||-.|.....+...++..+ |+.++-+|..-...+ +.....+.+..+++.....
T Consensus 1 ill~G~~G~GKT~l~~~la~~l---~~~~~~i~~~~~~~~-------~~~~~~~~i~~~~~~~~~~ 56 (132)
T PF00004_consen 1 ILLHGPPGTGKTTLARALAQYL---GFPFIEIDGSELISS-------YAGDSEQKIRDFFKKAKKS 56 (132)
T ss_dssp EEEESSTTSSHHHHHHHHHHHT---TSEEEEEETTHHHTS-------STTHHHHHHHHHHHHHHHT
T ss_pred CEEECcCCCCeeHHHHHHHhhc---ccccccccccccccc-------ccccccccccccccccccc
Confidence 6899998888766655555443 788998987654311 1222234555555555443
No 385
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=23.66 E-value=1.7e+02 Score=27.95 Aligned_cols=39 Identities=23% Similarity=0.469 Sum_probs=30.1
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHH-hCCcEEEEEeC
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRAR-SKGWRVVVFNS 150 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~-~~g~~vi~~D~ 150 (407)
.+|.++++-|..|+........++..+. +.|++|..+|.
T Consensus 97 ~~p~vi~~vG~~GsGKTTtaakLA~~l~~~~g~kV~lV~~ 136 (428)
T TIGR00959 97 KPPTVILMVGLQGSGKTTTCGKLAYYLKKKQGKKVLLVAC 136 (428)
T ss_pred CCCEEEEEECCCCCcHHHHHHHHHHHHHHhCCCeEEEEec
Confidence 5688999999999888777777777765 57888876664
No 386
>PRK00771 signal recognition particle protein Srp54; Provisional
Probab=23.60 E-value=1.5e+02 Score=28.44 Aligned_cols=40 Identities=20% Similarity=0.335 Sum_probs=32.0
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCC
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSR 151 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~r 151 (407)
..|.+|++-|..|.........++..+.+.|++|.+++.-
T Consensus 93 ~~p~vI~lvG~~GsGKTTtaakLA~~L~~~g~kV~lV~~D 132 (437)
T PRK00771 93 LKPQTIMLVGLQGSGKTTTAAKLARYFKKKGLKVGLVAAD 132 (437)
T ss_pred CCCeEEEEECCCCCcHHHHHHHHHHHHHHcCCeEEEecCC
Confidence 4577888889999888777778888888889999888764
No 387
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=23.52 E-value=1.4e+02 Score=28.18 Aligned_cols=77 Identities=13% Similarity=0.111 Sum_probs=44.3
Q ss_pred CCCCCccHHHHHHHHH-HHhCCcEEEEEeCCCCCCCCCCCCCcc---cCCChhHHHHHHHHHHhhCCCCcEEEEEechhH
Q 015401 122 LTGGSEDSYVRHMLLR-ARSKGWRVVVFNSRGCGDSPVTTPQFY---SASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGA 197 (407)
Q Consensus 122 ~~g~~~~~~~~~~~~~-l~~~g~~vi~~D~rG~G~S~~~~~~~~---~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg 197 (407)
++|.++..|+..+... ++..|..++++.+.|--.. .+.|. +..--.++.+.+.+|..++....+-+-.-|.|.
T Consensus 196 Mggedw~~Wi~al~~a~lla~g~~~va~TY~G~~~t---~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i~~g~ 272 (398)
T PRK13656 196 MGGEDWELWIDALDEAGVLAEGAKTVAYSYIGPELT---HPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVSVLKA 272 (398)
T ss_pred hccchHHHHHHHHHhcccccCCcEEEEEecCCccee---ecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCc
Confidence 3444565666555433 5678999999999865332 23332 222235677777777766544444455556665
Q ss_pred HHHH
Q 015401 198 NILI 201 (407)
Q Consensus 198 ~ia~ 201 (407)
....
T Consensus 273 ~~T~ 276 (398)
T PRK13656 273 VVTQ 276 (398)
T ss_pred ccch
Confidence 5443
No 388
>PRK10416 signal recognition particle-docking protein FtsY; Provisional
Probab=23.43 E-value=4.1e+02 Score=24.22 Aligned_cols=74 Identities=11% Similarity=0.183 Sum_probs=42.4
Q ss_pred HHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCC--CCcEEEEEechhHHHHHHHHhccCCCCCce
Q 015401 137 RARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYP--KAHLYAVGWSLGANILIRYLGHESHSCPLS 214 (407)
Q Consensus 137 ~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~--~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~ 214 (407)
....++|.++.+|-+|..... ....+.+..+.+.+....+ ...+++|-.+.-|.-++.-+..+-+...+.
T Consensus 191 ~~~~~~~D~ViIDTaGr~~~~--------~~l~~eL~~~~~v~~~~~~~~p~~~~LVl~a~~g~~~~~~a~~f~~~~~~~ 262 (318)
T PRK10416 191 AAKARGIDVLIIDTAGRLHNK--------TNLMEELKKIKRVIKKADPDAPHEVLLVLDATTGQNALSQAKAFHEAVGLT 262 (318)
T ss_pred HHHhCCCCEEEEeCCCCCcCC--------HHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCChHHHHHHHHHHhhCCCC
Confidence 345689999999999875432 2334556665555543222 224566666666666655555443322366
Q ss_pred eEEE
Q 015401 215 GAVS 218 (407)
Q Consensus 215 ~~v~ 218 (407)
++|+
T Consensus 263 giIl 266 (318)
T PRK10416 263 GIIL 266 (318)
T ss_pred EEEE
Confidence 6665
No 389
>TIGR03574 selen_PSTK L-seryl-tRNA(Sec) kinase, archaeal. Members of this protein are L-seryl-tRNA(Sec) kinase. This enzyme is part of a two-step pathway in Eukaryota and Archaea for performing selenocysteine biosynthesis by changing serine misacylated on selenocysteine-tRNA to selenocysteine. This enzyme performs the first step, phosphorylation of the OH group of the serine side chain. This family represents archaeal proteins with this activity.
Probab=23.37 E-value=1e+02 Score=26.82 Aligned_cols=34 Identities=21% Similarity=0.520 Sum_probs=26.7
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEe
Q 015401 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFN 149 (407)
Q Consensus 116 vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D 149 (407)
+|++-|.+|+..+.+...+...+...|+.++.++
T Consensus 1 LIvl~G~pGSGKST~a~~La~~l~~~~~~v~~i~ 34 (249)
T TIGR03574 1 LIILTGLPGVGKSTFSKELAKKLSEKNIDVIILG 34 (249)
T ss_pred CEEEEcCCCCCHHHHHHHHHHHHHHcCCceEEEc
Confidence 5788899998887777777777777788877774
No 390
>TIGR01969 minD_arch cell division ATPase MinD, archaeal. This model represents the archaeal branch of the MinD family. MinD, a weak ATPase, works in bacteria with MinC as a generalized cell division inhibitor and, through interaction with MinE, prevents septum placement inappropriate sites. Often several members of this family are found in archaeal genomes, and the function is uncharacterized. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. The exact roles of the various archaeal MinD homologs are unknown.
Probab=23.35 E-value=1.7e+02 Score=25.24 Aligned_cols=37 Identities=11% Similarity=0.218 Sum_probs=25.2
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCC
Q 015401 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRG 152 (407)
Q Consensus 116 vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG 152 (407)
|.++.+=+|...+...-.++..+.++|++|+.+|+--
T Consensus 3 i~v~~~KGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 39 (251)
T TIGR01969 3 ITIASGKGGTGKTTITANLGVALAKLGKKVLALDADI 39 (251)
T ss_pred EEEEcCCCCCcHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 4444444444444555677778888999999999854
No 391
>TIGR01968 minD_bact septum site-determining protein MinD. This model describes the bacterial and chloroplast form of MinD, a multifunctional cell division protein that guides correct placement of the septum. The homologous archaeal MinD proteins, with many archaeal genomes having two or more forms, are described by a separate model.
Probab=23.24 E-value=1.7e+02 Score=25.32 Aligned_cols=38 Identities=16% Similarity=0.236 Sum_probs=26.0
Q ss_pred EEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCC
Q 015401 115 VLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRG 152 (407)
Q Consensus 115 ~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG 152 (407)
+|.+.-+-+|...+.....++..+.+.|++|+++|.=-
T Consensus 3 ii~v~s~kGGvGKTt~a~~lA~~la~~g~~vlliD~D~ 40 (261)
T TIGR01968 3 VIVITSGKGGVGKTTTTANLGTALARLGKKVVLIDADI 40 (261)
T ss_pred EEEEecCCCCccHHHHHHHHHHHHHHcCCeEEEEECCC
Confidence 34455554454554555677777888999999999854
No 392
>PF04204 HTS: Homoserine O-succinyltransferase ; InterPro: IPR005697 This family of enzymes, homoserine O-succinyltransferase, catalyses the first step in the biosynthesis of methionine: Succinyl-CoA + L-homoserine = CoA + O-succinyl-L-homoserine This enzyme is consequently essential for the survival of bacteria, plants and fungi. Since they are not found in humans, they make a promising new target for antimicrobial drug development. Homoserine O-succinyltransferase (HST) is a representative from this class and has recently had the key amino acids involved in substrate specificity and catalysis elucidated [].; GO: 0016746 transferase activity, transferring acyl groups, 0019281 L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine, 0005737 cytoplasm; PDB: 2H2W_A 2GHR_A 2VDJ_A.
Probab=23.19 E-value=2.7e+02 Score=25.10 Aligned_cols=59 Identities=10% Similarity=0.202 Sum_probs=41.3
Q ss_pred HhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhc
Q 015401 139 RSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGH 206 (407)
Q Consensus 139 ~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~ 206 (407)
..++|.-+.+. +.+...-.+.-.++.+++.+++++.+.+ ...-+..++||+.|+.+.--
T Consensus 95 ~~~~~DglIIT-----GAPvE~l~Fe~V~YW~El~~i~dwa~~~----v~stl~iCWgAqAaLy~~yG 153 (298)
T PF04204_consen 95 KDRKFDGLIIT-----GAPVEQLPFEEVDYWDELTEIFDWAKTH----VTSTLFICWGAQAALYHFYG 153 (298)
T ss_dssp TTS-EEEEEE--------TTTTS-GGGSTTHHHHHHHHHHHHHH----EEEEEEETHHHHHHHHHHH-
T ss_pred hhCCCCEEEEe-----CCCcCCCCcccCCcHHHHHHHHHHHHHc----CCcchhhhHHHHHHHHHHcC
Confidence 44567765553 2333334455678899999999999998 88899999999999887643
No 393
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=23.13 E-value=3.8e+02 Score=21.54 Aligned_cols=53 Identities=15% Similarity=0.252 Sum_probs=33.1
Q ss_pred HHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEEEe
Q 015401 138 ARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGW 193 (407)
Q Consensus 138 l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~ 193 (407)
+......++++.. |. .+........+.+.+.+..+++.++...+..+++++|.
T Consensus 52 l~~~~pd~Vii~~-G~--ND~~~~~~~~~~~~~~~~~li~~i~~~~~~~~iv~~~~ 104 (189)
T cd01825 52 LAALPPDLVILSY-GT--NEAFNKQLNASEYRQQLREFIKRLRQILPNASILLVGP 104 (189)
T ss_pred HhhCCCCEEEEEC-CC--cccccCCCCHHHHHHHHHHHHHHHHHHCCCCeEEEEcC
Confidence 3345566666654 22 22111223345678888999999988777778888874
No 394
>PLN02748 tRNA dimethylallyltransferase
Probab=22.93 E-value=2.2e+02 Score=27.65 Aligned_cols=78 Identities=14% Similarity=0.208 Sum_probs=45.9
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeC----CCCC--CCCC-----------------CCCCcccCCC
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNS----RGCG--DSPV-----------------TTPQFYSASF 168 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~----rG~G--~S~~-----------------~~~~~~~~~~ 168 (407)
.++.+|+|-|-+|+..+.....++. .-+..+|..|- +|.- .... +...++...|
T Consensus 20 ~~~~~i~i~GptgsGKs~la~~la~---~~~~eii~~DsmQVYrgLdIgTaKpt~eE~~~VpHHLid~v~p~e~ysv~~F 96 (468)
T PLN02748 20 GKAKVVVVMGPTGSGKSKLAVDLAS---HFPVEIINADSMQVYSGLDVLTNKVPLHEQKGVPHHLLGVISPSVEFTAKDF 96 (468)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHH---hcCeeEEcCchheeeCCcchhcCCCCHHHHcCCCCeeEeecCCCCcCcHHHH
Confidence 4566888899888776443322222 23667888883 4431 1110 1123555667
Q ss_pred hhHHHHHHHHHHhhCCCCcEEEEEec
Q 015401 169 LGDMQEVVAHVGSKYPKAHLYAVGWS 194 (407)
Q Consensus 169 ~~Dl~~~l~~l~~~~~~~~v~lvG~S 194 (407)
..+...+|+.+..+ +...+|||-|
T Consensus 97 ~~~A~~~I~~I~~r--gk~PIlVGGT 120 (468)
T PLN02748 97 RDHAVPLIEEILSR--NGLPVIVGGT 120 (468)
T ss_pred HHHHHHHHHHHHhc--CCCeEEEcCh
Confidence 78888888888775 2345677654
No 395
>COG3596 Predicted GTPase [General function prediction only]
Probab=22.63 E-value=4.8e+02 Score=23.37 Aligned_cols=46 Identities=28% Similarity=0.547 Sum_probs=30.5
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHH-------------------HHHhCCcEEEEEeCCCCCCCC
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLL-------------------RARSKGWRVVVFNSRGCGDSP 157 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~-------------------~l~~~g~~vi~~D~rG~G~S~ 157 (407)
..|+.+++-|-+|...++.+..+.. ...-.|-..+.+|.||.|.+.
T Consensus 37 ~~pvnvLi~G~TG~GKSSliNALF~~~~~~v~~vg~~t~~~~~~~~~~~~~~l~lwDtPG~gdg~ 101 (296)
T COG3596 37 KEPVNVLLMGATGAGKSSLINALFQGEVKEVSKVGVGTDITTRLRLSYDGENLVLWDTPGLGDGK 101 (296)
T ss_pred cCceeEEEecCCCCcHHHHHHHHHhccCceeeecccCCCchhhHHhhccccceEEecCCCcccch
Confidence 5677888888888777665554431 111234567889999999875
No 396
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=22.51 E-value=93 Score=25.17 Aligned_cols=23 Identities=17% Similarity=-0.195 Sum_probs=17.6
Q ss_pred CcEEEEEechhHHHHHHHHhccC
Q 015401 186 AHLYAVGWSLGANILIRYLGHES 208 (407)
Q Consensus 186 ~~v~lvG~S~Gg~ia~~~a~~~p 208 (407)
..-.+.|-|.||.+++.++....
T Consensus 27 ~~d~i~GtS~Gal~a~~~~~~~~ 49 (204)
T PF01734_consen 27 RFDVISGTSAGALNAALLALGYD 49 (204)
T ss_dssp T-SEEEEECCHHHHHHHHHTC-T
T ss_pred CccEEEEcChhhhhHHHHHhCCC
Confidence 35589999999999988877643
No 397
>PF03054 tRNA_Me_trans: tRNA methyl transferase; InterPro: IPR004506 tRNA-specific 2-thiouridylase catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.; GO: 0016740 transferase activity, 0008033 tRNA processing, 0005737 cytoplasm; PDB: 2DET_A 2DER_A 2DEU_A 2HMA_A.
Probab=22.35 E-value=41 Score=31.20 Aligned_cols=45 Identities=16% Similarity=0.250 Sum_probs=24.4
Q ss_pred HHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHh
Q 015401 137 RARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGS 181 (407)
Q Consensus 137 ~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~ 181 (407)
.|.++||.|+.+-++-....+............+|+..+.+.|..
T Consensus 19 LLk~~G~~V~Gv~m~~~~~~~~~~~~c~~~~d~~~a~~va~~LgI 63 (356)
T PF03054_consen 19 LLKEQGYDVIGVTMRNWDEEDESGKSCCSEEDIEDARRVAEKLGI 63 (356)
T ss_dssp HHHHCT-EEEEEEEE-SS-SSSHH-HHHHHHHHHHHHHHHHHHT-
T ss_pred HHHhhcccceEEEEEEeccccccCCCCCchhhHHHHHHHHHhcCC
Confidence 467899999999988665432111111122335677777777765
No 398
>TIGR01287 nifH nitrogenase iron protein. This model describes nitrogenase (EC 1.18.6.1) iron protein, also called nitrogenase reductase or nitrogenase component II. This model includes molybdenum-iron nitrogenase reductase (nifH), vanadium-iron nitrogenase reductase (vnfH), and iron-iron nitrogenase reductase (anfH). The model excludes the homologous protein from the light-independent protochlorophyllide reductase.
Probab=22.29 E-value=1.9e+02 Score=25.45 Aligned_cols=39 Identities=15% Similarity=0.188 Sum_probs=28.4
Q ss_pred EeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCC
Q 015401 118 LMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDS 156 (407)
Q Consensus 118 ~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S 156 (407)
.+-|=+|.......-.++..|.++|++|+++|+=..|..
T Consensus 4 a~~gKGGVGKTT~a~nLA~~La~~G~~VlliD~D~q~~~ 42 (275)
T TIGR01287 4 AIYGKGGIGKSTTTQNIAAALAEMGKKVMIVGCDPKADS 42 (275)
T ss_pred EEeCCCcCcHHHHHHHHHHHHHHCCCeEEEEeCCCCCCc
Confidence 334755655655567788889999999999999655544
No 399
>cd02032 Bchl_like This family of proteins contains bchL and chlL. Protochlorophyllide reductase catalyzes the reductive formation of chlorophyllide from protochlorophyllide during biosynthesis of chlorophylls and bacteriochlorophylls. Three genes, bchL, bchN and bchB, are involved in light-independent protochlorophyllide reduction in bacteriochlorophyll biosynthesis. In cyanobacteria, algae, and gymnosperms, three similar genes, chlL, chlN and chlB are involved in protochlorophyllide reduction during chlorophylls biosynthesis. BchL/chlL, bchN/chlN and bchB/chlB exhibit significant sequence similarity to the nifH, nifD and nifK subunits of nitrogenase, respectively. Nitrogenase catalyzes the reductive formation of ammonia from dinitrogen.
Probab=22.25 E-value=1.5e+02 Score=26.11 Aligned_cols=35 Identities=14% Similarity=0.190 Sum_probs=26.0
Q ss_pred CCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCC
Q 015401 121 GLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGD 155 (407)
Q Consensus 121 G~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~ 155 (407)
|=+|.......-.++..+.++|++|+++|.=-.|.
T Consensus 7 gKGGvGKTT~a~nLA~~la~~G~rvlliD~Dpq~~ 41 (267)
T cd02032 7 GKGGIGKSTTSSNLSVALAKRGKKVLQIGCDPKHD 41 (267)
T ss_pred cCCCCCHHHHHHHHHHHHHHCCCcEEEEecCCCCC
Confidence 65555555556778888999999999999864443
No 400
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=22.09 E-value=2.8e+02 Score=26.55 Aligned_cols=22 Identities=27% Similarity=0.436 Sum_probs=16.3
Q ss_pred HHHHHHhCCcEEEEEeCCCCCC
Q 015401 134 MLLRARSKGWRVVVFNSRGCGD 155 (407)
Q Consensus 134 ~~~~l~~~g~~vi~~D~rG~G~ 155 (407)
....+...+|.++.+|-+|...
T Consensus 174 al~~~~~~~~DvVIIDTaGr~~ 195 (428)
T TIGR00959 174 ALEYAKENGFDVVIVDTAGRLQ 195 (428)
T ss_pred HHHHHHhcCCCEEEEeCCCccc
Confidence 3344556789999999998643
No 401
>PF09140 MipZ: ATPase MipZ; InterPro: IPR015223 Cell division in bacteria is facilitated by a polymeric ring structure, the Z ring, composed of tubulin-like FtsZ protofilaments. Correct positioning of the division plane is a prerequisite for the generation of daughter cells with a normal chromosome complement. In Caulobacter crescentus MipZ, an essential protein, coordinates and regulates the assembly of the FtsZ cytokinetic ring during cell division. MipZ, forms a complex with the partitioning protein ParB near the origin of replication and localizes with the duplicated origin regions to the cell poles. MipZ also directly interferes with FtsZ polymerisation, thereby restricting FtsZ ring formation to mid-cell, the region of lowest MipZ concentration. In eukaryotes members of this entry belong to the Mrp/NBP35 ATP-binding protein family, and specifically the NUBP2/CFD1 subfamily. This includes the cytosolic Fe-S cluster assembly factor Cfd1, which is a component of the cytosolic iron-sulphur (Fe/S) protein assembly machinery. This protein is required for maturation of extra-mitochondrial Fe/S proteins. It may bind and transfer a labile 4Fe-4S cluster to target apoproteins. Cfd1 is also required for biogenesis and export of both ribosomal subunits, suggesting a role in assembly of the Fe/S clusters in RLI1, a protein which performs rRNA processing and ribosome export. ; PDB: 2XIT_B 2XJ4_A 2XJ9_A.
Probab=22.08 E-value=1.7e+02 Score=25.69 Aligned_cols=42 Identities=12% Similarity=0.152 Sum_probs=27.9
Q ss_pred EEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCC
Q 015401 115 VLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDS 156 (407)
Q Consensus 115 ~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S 156 (407)
.|++..|=+|...+...-+++..|+..|++|-++|.=-+|.|
T Consensus 2 iIvV~sgKGGvGKSTva~~lA~aLa~~G~kVg~lD~Di~q~S 43 (261)
T PF09140_consen 2 IIVVGSGKGGVGKSTVAVNLAVALARMGKKVGLLDLDIRQPS 43 (261)
T ss_dssp EEEEE-SSTTTTHHHHHHHHHHHHHCTT--EEEEE--TTT-H
T ss_pred EEEEecCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 466667766766766667888889999999999998777665
No 402
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=21.98 E-value=3.2e+02 Score=22.95 Aligned_cols=90 Identities=16% Similarity=0.209 Sum_probs=45.1
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCC------CCCCccc-CCC----hhHHHH--HHHH
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPV------TTPQFYS-ASF----LGDMQE--VVAH 178 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~------~~~~~~~-~~~----~~Dl~~--~l~~ 178 (407)
..+.|+++.-..+. .+.+.......+.+.|..+..+...-....+. .....+. ... .+-+.. +++.
T Consensus 28 ~~~~i~~iptA~~~-~~~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~l~~ad~I~~~GG~~~~~~~~l~~t~~~~~ 106 (210)
T cd03129 28 AGARVLFIPTASGD-RDEYGEEYRAAFERLGVEVVHLLLIDTANDPDVVARLLEADGIFVGGGNQLRLLSVLRETPLLDA 106 (210)
T ss_pred CCCeEEEEeCCCCC-hHHHHHHHHHHHHHcCCceEEEeccCCCCCHHHHHHHhhCCEEEEcCCcHHHHHHHHHhCChHHH
Confidence 34667777665443 33555666667777788877665542211110 0000000 000 111111 2222
Q ss_pred HHhhCCCCcEEEEEechhHHHHHHH
Q 015401 179 VGSKYPKAHLYAVGWSLGANILIRY 203 (407)
Q Consensus 179 l~~~~~~~~v~lvG~S~Gg~ia~~~ 203 (407)
+...+. +-..++|.|.|+++....
T Consensus 107 i~~~~~-~G~v~~G~SAGA~~~~~~ 130 (210)
T cd03129 107 ILKRVA-RGVVIGGTSAGAAVMGET 130 (210)
T ss_pred HHHHHH-cCCeEEEcCHHHHHhhhc
Confidence 222222 267999999999998876
No 403
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=21.93 E-value=3.1e+02 Score=24.29 Aligned_cols=76 Identities=9% Similarity=0.153 Sum_probs=0.0
Q ss_pred HHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHH------hhCCCCcEEEEEechhHHHHHHHH
Q 015401 131 VRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVG------SKYPKAHLYAVGWSLGANILIRYL 204 (407)
Q Consensus 131 ~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~------~~~~~~~v~lvG~S~Gg~ia~~~a 204 (407)
.......+..++|.++.+|-+|....+ ....+++..+.+.+. .. .+++|--+..|.-++.-+
T Consensus 143 ~~~~l~~~~~~~~D~ViIDT~G~~~~d--------~~~~~el~~~~~~~~~~~~~~~~----~~~LVl~a~~~~~~~~~~ 210 (272)
T TIGR00064 143 AFDAIQKAKARNIDVVLIDTAGRLQNK--------VNLMDELKKIKRVIKKVDKDAPD----EVLLVLDATTGQNALEQA 210 (272)
T ss_pred HHHHHHHHHHCCCCEEEEeCCCCCcch--------HHHHHHHHHHHHHHhcccCCCCc----eEEEEEECCCCHHHHHHH
Q ss_pred hccCCCCCceeEEE
Q 015401 205 GHESHSCPLSGAVS 218 (407)
Q Consensus 205 ~~~p~~~~v~~~v~ 218 (407)
..+-+...+.++|+
T Consensus 211 ~~f~~~~~~~g~Il 224 (272)
T TIGR00064 211 KVFNEAVGLTGIIL 224 (272)
T ss_pred HHHHhhCCCCEEEE
No 404
>PRK12724 flagellar biosynthesis regulator FlhF; Provisional
Probab=21.68 E-value=4.5e+02 Score=25.20 Aligned_cols=75 Identities=13% Similarity=0.106 Sum_probs=38.6
Q ss_pred HHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEEEechhHHHHHHHHhccCCCCCce
Q 015401 135 LLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLGANILIRYLGHESHSCPLS 214 (407)
Q Consensus 135 ~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~Gg~ia~~~a~~~p~~~~v~ 214 (407)
...+...++.++++|-.|+...+ ....+.+..+++......+...+.++--+.|..-....+..+ ...++.
T Consensus 292 ~~~l~~~~~D~VLIDTaGr~~rd--------~~~l~eL~~~~~~~~~~~~~e~~LVLsAt~~~~~~~~~~~~f-~~~~~~ 362 (432)
T PRK12724 292 KETLARDGSELILIDTAGYSHRN--------LEQLERMQSFYSCFGEKDSVENLLVLSSTSSYHHTLTVLKAY-ESLNYR 362 (432)
T ss_pred HHHHHhCCCCEEEEeCCCCCccC--------HHHHHHHHHHHHhhcCCCCCeEEEEEeCCCCHHHHHHHHHHh-cCCCCC
Confidence 33344578999999997764221 112333444443332222223444444455554555555555 333477
Q ss_pred eEEE
Q 015401 215 GAVS 218 (407)
Q Consensus 215 ~~v~ 218 (407)
++|+
T Consensus 363 glIl 366 (432)
T PRK12724 363 RILL 366 (432)
T ss_pred EEEE
Confidence 7776
No 405
>cd02117 NifH_like This family contains the NifH (iron protein) of nitrogenase, L subunit (BchL/ChlL) of the protochlorophyllide reductase and the BchX subunit of the Chlorophyllide reductase. Members of this family use energey from ATP hydrolysis and transfer electrons through a Fe4-S4 cluster to other subunit for reduction of substrate.
Probab=21.61 E-value=2.1e+02 Score=24.01 Aligned_cols=36 Identities=17% Similarity=0.165 Sum_probs=27.1
Q ss_pred CCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCC
Q 015401 121 GLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDS 156 (407)
Q Consensus 121 G~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S 156 (407)
|=+|.........++..+.+.|++|+++|.--.|.+
T Consensus 7 gKGGvGKTt~~~nLA~~la~~G~rvLliD~D~q~~~ 42 (212)
T cd02117 7 GKGGIGKSTTSQNLSAALAEMGKKVLQVGCDPKADS 42 (212)
T ss_pred CCCcCcHHHHHHHHHHHHHHCCCcEEEEeCCCCCCc
Confidence 655555555567888889999999999998766644
No 406
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=21.53 E-value=3.1e+02 Score=20.77 Aligned_cols=14 Identities=36% Similarity=0.639 Sum_probs=10.7
Q ss_pred HHHHHhCCcEEEEE
Q 015401 135 LLRARSKGWRVVVF 148 (407)
Q Consensus 135 ~~~l~~~g~~vi~~ 148 (407)
...|.+.||+|+.+
T Consensus 100 ~~~L~~~Gw~Vlr~ 113 (117)
T TIGR00632 100 NSRLQELGWRVLRV 113 (117)
T ss_pred HHHHHHCcCEEEEE
Confidence 34577899999876
No 407
>COG3640 CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning]
Probab=21.49 E-value=1.7e+02 Score=25.41 Aligned_cols=66 Identities=20% Similarity=0.260 Sum_probs=37.4
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHHhCC-cEEEEEeCCC-CCCCCCCCCCccc-CCChhHHHHHHHHHHhhC
Q 015401 116 LILMPGLTGGSEDSYVRHMLLRARSKG-WRVVVFNSRG-CGDSPVTTPQFYS-ASFLGDMQEVVAHVGSKY 183 (407)
Q Consensus 116 vv~lHG~~g~~~~~~~~~~~~~l~~~g-~~vi~~D~rG-~G~S~~~~~~~~~-~~~~~Dl~~~l~~l~~~~ 183 (407)
.|.+-|=+|+..+.....++..+++++ |+|+++|--- .+..... .... .....+.+++++......
T Consensus 2 kIaI~GKGG~GKTtiaalll~~l~~~~~~~VLvVDaDpd~nL~~~L--Gve~~~~~lg~~~e~~~k~~~a~ 70 (255)
T COG3640 2 KIAITGKGGVGKTTIAALLLKRLLSKGGYNVLVVDADPDSNLPEAL--GVEEPMKYLGGKRELLKKRTGAE 70 (255)
T ss_pred eEEEecCCCccHHHHHHHHHHHHHhcCCceEEEEeCCCCCChHHhc--CCCCCCcccccHHHHHHHHhccC
Confidence 456667666666444333366777766 9999999732 2211100 0011 344567788888776553
No 408
>TIGR00041 DTMP_kinase thymidylate kinase. Function: phosphorylation of DTMP to form DTDP in both de novo and salvage pathways of DTTP synthesis. Catalytic activity: ATP + thymidine 5'-phosphate = ADP + thymidine 5'-diphosphate.
Probab=21.39 E-value=2.3e+02 Score=23.19 Aligned_cols=39 Identities=15% Similarity=0.374 Sum_probs=31.4
Q ss_pred cEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCC
Q 015401 114 PVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRG 152 (407)
Q Consensus 114 p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG 152 (407)
..+|.+=|..|+..+.....+...+...|+.|+....|+
T Consensus 3 g~~IvieG~~GsGKsT~~~~L~~~l~~~g~~v~~~~~~~ 41 (195)
T TIGR00041 3 GMFIVIEGIDGAGKTTQANLLKKLLQENGYDVLFTREPG 41 (195)
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEeCCC
Confidence 357888898888887777888888888899998777664
No 409
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=21.37 E-value=2.8e+02 Score=26.94 Aligned_cols=75 Identities=19% Similarity=0.327 Sum_probs=44.3
Q ss_pred EEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhhCCCCcEEEEEechh
Q 015401 117 ILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSKYPKAHLYAVGWSLG 196 (407)
Q Consensus 117 v~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~v~lvG~S~G 196 (407)
+|--|++.+.. ......+.....+||.|+.+|-.|.=.. ...+...+..+++.-+ | ..|+.||--+=
T Consensus 442 lfekGYgkd~a-~vak~AI~~a~~~gfDVvLiDTAGR~~~--------~~~lm~~l~k~~~~~~---p-d~i~~vgealv 508 (587)
T KOG0781|consen 442 LFEKGYGKDAA-GVAKEAIQEARNQGFDVVLIDTAGRMHN--------NAPLMTSLAKLIKVNK---P-DLILFVGEALV 508 (587)
T ss_pred HHhhhcCCChH-HHHHHHHHHHHhcCCCEEEEeccccccC--------ChhHHHHHHHHHhcCC---C-ceEEEehhhhh
Confidence 44557765543 3445556667789999999998764222 1222333333333322 2 38899998887
Q ss_pred HHHHHHHH
Q 015401 197 ANILIRYL 204 (407)
Q Consensus 197 g~ia~~~a 204 (407)
|.-++.-+
T Consensus 509 g~dsv~q~ 516 (587)
T KOG0781|consen 509 GNDSVDQL 516 (587)
T ss_pred CcHHHHHH
Confidence 77665433
No 410
>TIGR01007 eps_fam capsular exopolysaccharide family. This model describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis(EPS). Atleast 13 genes espA to espM in streptococcus species seem to direct the EPS proteins and all of which share high homology. Functional roles were characterized by gene disruption experiments which resulted in exopolysaccharide-deficient phenotypes.
Probab=21.18 E-value=2.6e+02 Score=23.23 Aligned_cols=38 Identities=11% Similarity=0.297 Sum_probs=24.7
Q ss_pred cEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCC
Q 015401 114 PVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSR 151 (407)
Q Consensus 114 p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~r 151 (407)
..|.+.-+-+|.........++..+...|++|+++|.=
T Consensus 18 kvI~v~s~kgG~GKTt~a~~LA~~la~~G~rVllID~D 55 (204)
T TIGR01007 18 KVLLITSVKPGEGKSTTSANIAVAFAQAGYKTLLIDGD 55 (204)
T ss_pred cEEEEecCCCCCCHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 33444444444444444567777788899999999974
No 411
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=20.89 E-value=4.6e+02 Score=21.27 Aligned_cols=50 Identities=14% Similarity=0.100 Sum_probs=30.7
Q ss_pred HHHHHHHhCCcEEEEEeCCCCCCCCCCCCCcccCCChhHHHHHHHHHHhh
Q 015401 133 HMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMQEVVAHVGSK 182 (407)
Q Consensus 133 ~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~~~~~~Dl~~~l~~l~~~ 182 (407)
..++.+.+++|-|..+|+--.-..+..---.....|++.-..+++++...
T Consensus 18 acv~~FkannywV~siDl~eNe~Ad~sI~V~~~~swtEQe~~v~~~vg~s 67 (236)
T KOG4022|consen 18 ACVEFFKANNYWVLSIDLSENEQADSSILVDGNKSWTEQEQSVLEQVGSS 67 (236)
T ss_pred HHHHHHHhcCeEEEEEeecccccccceEEecCCcchhHHHHHHHHHHHHh
Confidence 45567788999999999964433221111112356677777777776653
No 412
>TIGR01281 DPOR_bchL light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein. The BchL peptide (ChlL in chloroplast and cyanobacteria) is an ATP-binding iron-sulfur protein of the dark form protochlorophyllide reductase, an enzyme similar to nitrogenase. This subunit resembles the nitrogenase NifH subunit.
Probab=20.81 E-value=1.8e+02 Score=25.44 Aligned_cols=35 Identities=17% Similarity=0.153 Sum_probs=25.5
Q ss_pred CCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCC
Q 015401 121 GLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGD 155 (407)
Q Consensus 121 G~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~ 155 (407)
|=+|.......-.++..|+++|++|+++|+=-.|.
T Consensus 7 gKGGVGKTT~~~nLA~~La~~g~rVLliD~D~q~~ 41 (268)
T TIGR01281 7 GKGGIGKSTTSSNLSVAFAKLGKRVLQIGCDPKHD 41 (268)
T ss_pred cCCcCcHHHHHHHHHHHHHhCCCeEEEEecCcccc
Confidence 65555554555677788889999999999855544
No 413
>PRK13529 malate dehydrogenase; Provisional
Probab=20.67 E-value=1.1e+02 Score=30.23 Aligned_cols=102 Identities=16% Similarity=0.126 Sum_probs=50.2
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHHhCCc-------EEEEEeCCCCCCCCCCCC---Cccc----CC--------ChhHHH
Q 015401 116 LILMPGLTGGSEDSYVRHMLLRARSKGW-------RVVVFNSRGCGDSPVTTP---QFYS----AS--------FLGDMQ 173 (407)
Q Consensus 116 vv~lHG~~g~~~~~~~~~~~~~l~~~g~-------~vi~~D~rG~G~S~~~~~---~~~~----~~--------~~~Dl~ 173 (407)
-|++.|.+ +..-...+.+...+...|. +++.+|..|-=..+...- +..+ .. ...++.
T Consensus 297 riv~~GAG-sAgiGia~ll~~~~~~~Gl~~eeA~~~i~~vD~~GLl~~~r~~l~~~k~~fa~~~~~~~~~~~~~~~~~L~ 375 (563)
T PRK13529 297 RIVFLGAG-SAGCGIADQIVAAMVREGLSEEEARKRFFMVDRQGLLTDDMPDLLDFQKPYARKREELADWDTEGDVISLL 375 (563)
T ss_pred EEEEECCC-HHHHHHHHHHHHHHHHcCCChhHhcCeEEEEcCCCeEeCCCCcchHHHHHHhhhcccccccccccCCCCHH
Confidence 45556653 3332333445555555687 899999998533222110 0000 00 112455
Q ss_pred HHHHHHHhhCCCCcEEEEEech-hHHHHHHHHhccCCCCCceeEEEEcCCCC
Q 015401 174 EVVAHVGSKYPKAHLYAVGWSL-GANILIRYLGHESHSCPLSGAVSLCNPFN 224 (407)
Q Consensus 174 ~~l~~l~~~~~~~~v~lvG~S~-Gg~ia~~~a~~~p~~~~v~~~v~l~~p~~ 224 (407)
++++.++ +-+++|-|- ||.+.-.+....-..+.=--+..+++|..
T Consensus 376 e~v~~~k------PtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~ 421 (563)
T PRK13529 376 EVVRNVK------PTVLIGVSGQPGAFTEEIVKEMAAHCERPIIFPLSNPTS 421 (563)
T ss_pred HHHhccC------CCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECCCcCC
Confidence 5555544 568999998 66554333322211100123555677764
No 414
>cd02042 ParA ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation. ParB binds to DNA sequences adjacent to the origin of replication and localizes to opposite cell poles shortly following the initiation of DNA replication. ParB regulates the ParA ATPase activity by promoting nucleotide exchange in a fashion reminiscent of the exchange factors of eukaryotic G proteins. ADP-bound ParA binds single-stranded DNA, whereas the ATP-bound form dissociates ParB from its DNA binding sites. Increasing the fraction of ParA-ADP in the cell inhibits cell division, suggesting that this simple nucleotide switch may regulate cytokinesis. ParA shares sequence similarity to a conserved and widespread family of ATPases which includes the repA protein of the repABC operon in R. etli Sym plasmid. This operon is involved in the plasmid replication and partition.
Probab=20.59 E-value=2.1e+02 Score=20.44 Aligned_cols=28 Identities=14% Similarity=0.239 Sum_probs=19.4
Q ss_pred CCCccHHHHHHHHHHHhCCcEEEEEeCC
Q 015401 124 GGSEDSYVRHMLLRARSKGWRVVVFNSR 151 (407)
Q Consensus 124 g~~~~~~~~~~~~~l~~~g~~vi~~D~r 151 (407)
|...+.....++..+.++|.+|+++|.=
T Consensus 10 G~Gkst~~~~la~~~~~~~~~vl~~d~d 37 (104)
T cd02042 10 GVGKTTTAVNLAAALARRGKRVLLIDLD 37 (104)
T ss_pred CcCHHHHHHHHHHHHHhCCCcEEEEeCC
Confidence 3334444566777777799999999863
No 415
>PRK06762 hypothetical protein; Provisional
Probab=20.53 E-value=1.6e+02 Score=23.50 Aligned_cols=25 Identities=20% Similarity=0.440 Sum_probs=17.8
Q ss_pred cEEEEeCCCCCCCccHHHHHHHHHH
Q 015401 114 PVLILMPGLTGGSEDSYVRHMLLRA 138 (407)
Q Consensus 114 p~vv~lHG~~g~~~~~~~~~~~~~l 138 (407)
|.+|++-|..|+..+.+...+...+
T Consensus 2 ~~li~i~G~~GsGKST~A~~L~~~l 26 (166)
T PRK06762 2 TTLIIIRGNSGSGKTTIAKQLQERL 26 (166)
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHh
Confidence 6789999999988866655544443
No 416
>PRK06523 short chain dehydrogenase; Provisional
Probab=20.50 E-value=5.5e+02 Score=22.01 Aligned_cols=64 Identities=22% Similarity=0.154 Sum_probs=34.6
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCCCCCCCCCccc--CCChhHHHHHHHHHHhhCC
Q 015401 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGDSPVTTPQFYS--ASFLGDMQEVVAHVGSKYP 184 (407)
Q Consensus 116 vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~S~~~~~~~~~--~~~~~Dl~~~l~~l~~~~~ 184 (407)
.+++.|.+++-. ..++..+.++|++|++.+...-..... .-.+.. -...+++..+++.+...++
T Consensus 11 ~vlItGas~gIG----~~ia~~l~~~G~~v~~~~r~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~ 76 (260)
T PRK06523 11 RALVTGGTKGIG----AATVARLLEAGARVVTTARSRPDDLPE-GVEFVAADLTTAEGCAAVARAVLERLG 76 (260)
T ss_pred EEEEECCCCchh----HHHHHHHHHCCCEEEEEeCChhhhcCC-ceeEEecCCCCHHHHHHHHHHHHHHcC
Confidence 566777555443 456777888999999998642211100 000111 1123556667777666543
No 417
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=20.49 E-value=2e+02 Score=27.45 Aligned_cols=37 Identities=27% Similarity=0.494 Sum_probs=31.1
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEE
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVF 148 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~ 148 (407)
..|.||++=|+-|+........++.++.++|+.|.++
T Consensus 98 ~~P~vImmvGLQGsGKTTt~~KLA~~lkk~~~kvllV 134 (451)
T COG0541 98 KPPTVILMVGLQGSGKTTTAGKLAKYLKKKGKKVLLV 134 (451)
T ss_pred CCCeEEEEEeccCCChHhHHHHHHHHHHHcCCceEEE
Confidence 5799999999999887666778888898899987665
No 418
>PRK13235 nifH nitrogenase reductase; Reviewed
Probab=20.41 E-value=1.8e+02 Score=25.72 Aligned_cols=39 Identities=15% Similarity=0.214 Sum_probs=27.4
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEeCCCCCC
Q 015401 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFNSRGCGD 155 (407)
Q Consensus 116 vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D~rG~G~ 155 (407)
|-+. |=+|.......-.++..|.+.|++|+++|.=-.|.
T Consensus 4 iav~-~KGGVGKTT~~~nLA~~La~~G~rVLlID~Dpq~~ 42 (274)
T PRK13235 4 VAIY-GKGGIGKSTTTQNTVAGLAEMGKKVMVVGCDPKAD 42 (274)
T ss_pred EEEe-CCCCccHHHHHHHHHHHHHHCCCcEEEEecCCccc
Confidence 4455 65555555556678888999999999999844443
No 419
>TIGR03018 pepcterm_TyrKin exopolysaccharide/PEPCTERM locus tyrosine autokinase. Members of this protein family are related to a known protein-tyrosine autokinase and to numerous homologs from exopolysaccharide biosynthesis region proteins, many of which are designated as chain length determinants. Most members of this family contain a short region, immediately C-terminal to the region modeled here, with an abundance of Tyr residues. These C-terminal tyrosine residues are likely to be autophosphorylation sites. Some members of this family are fusion proteins.
Probab=20.29 E-value=3.1e+02 Score=22.90 Aligned_cols=40 Identities=8% Similarity=0.214 Sum_probs=26.2
Q ss_pred CCcEEEEeCCCCCCCccHHHHHHHHHHHh-CCcEEEEEeCC
Q 015401 112 DSPVLILMPGLTGGSEDSYVRHMLLRARS-KGWRVVVFNSR 151 (407)
Q Consensus 112 ~~p~vv~lHG~~g~~~~~~~~~~~~~l~~-~g~~vi~~D~r 151 (407)
...+|.++-+-+|...+.....++..+.. .|++|+++|.=
T Consensus 34 ~~~vi~v~s~kgG~GkSt~a~nLA~~la~~~g~~VLlvD~D 74 (207)
T TIGR03018 34 NNNLIMVTSSLPGEGKSFTAINLAISLAQEYDKTVLLIDAD 74 (207)
T ss_pred CCeEEEEECCCCCCCHHHHHHHHHHHHHHhcCCeEEEEECC
Confidence 34556666555555554445567777765 69999999874
No 420
>PRK07952 DNA replication protein DnaC; Validated
Probab=20.28 E-value=1.7e+02 Score=25.49 Aligned_cols=34 Identities=12% Similarity=0.241 Sum_probs=27.2
Q ss_pred EEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEe
Q 015401 116 LILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFN 149 (407)
Q Consensus 116 vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D 149 (407)
-++++|-+|....+....++..+...|+.|+.++
T Consensus 101 ~~~l~G~~GtGKThLa~aia~~l~~~g~~v~~it 134 (244)
T PRK07952 101 SFIFSGKPGTGKNHLAAAICNELLLRGKSVLIIT 134 (244)
T ss_pred eEEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEE
Confidence 6788888888876777777778888899988884
No 421
>KOG2728 consensus Uncharacterized conserved protein with similarity to phosphopantothenoylcysteine synthetase/decarboxylase [General function prediction only]
Probab=20.28 E-value=5.9e+02 Score=22.29 Aligned_cols=68 Identities=12% Similarity=0.250 Sum_probs=39.6
Q ss_pred HHHHhhhcCCCCCCccEEEEEcCCCCEEEEEeecCCCCCCCCCCcEEEEeCCCCCCCccHHHHHHHHHHHhCCcEEEEEe
Q 015401 70 TIFAAFFRSLPDVKLKRECIRTKDDGSVALDWISGDHQLLPPDSPVLILMPGLTGGSEDSYVRHMLLRARSKGWRVVVFN 149 (407)
Q Consensus 70 t~~~~~~~~~~~~~~~r~~~~~~dg~~~~~~~~~~~~~~~~~~~p~vv~lHG~~g~~~~~~~~~~~~~l~~~g~~vi~~D 149 (407)
..+..+.+......-+|..+.++.|.++.++ .-+|=|+--+..+... ..-+..+++.||.||.+-
T Consensus 16 s~~~eFi~~q~s~~~rrIVlVTSGGTtVPLE------------~ntVRFiDNFSaGtRG---AaSAE~Fl~agYaVIFl~ 80 (302)
T KOG2728|consen 16 SLIEEFIKLQASLQGRRIVLVTSGGTTVPLE------------QNTVRFIDNFSAGTRG---AASAEYFLAAGYAVIFLY 80 (302)
T ss_pred HHHHHHHHHHhhccCceEEEEecCCeEeecc------------cCceEeeeccCcCCcc---chhHHHHHhCCceEEEEe
Confidence 3344444433334445667777777655432 3456677666544432 234556889999999886
Q ss_pred CCC
Q 015401 150 SRG 152 (407)
Q Consensus 150 ~rG 152 (407)
..+
T Consensus 81 R~~ 83 (302)
T KOG2728|consen 81 RER 83 (302)
T ss_pred ecc
Confidence 654
No 422
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=20.26 E-value=4.4e+02 Score=20.85 Aligned_cols=26 Identities=12% Similarity=0.293 Sum_probs=15.7
Q ss_pred cCCChhHHHHHHHHHHhhCCCCcEEEEE
Q 015401 165 SASFLGDMQEVVAHVGSKYPKAHLYAVG 192 (407)
Q Consensus 165 ~~~~~~Dl~~~l~~l~~~~~~~~v~lvG 192 (407)
.+.+.+.+..+++.++.. +.++++++
T Consensus 83 ~~~~~~~l~~li~~~~~~--~~~vil~~ 108 (177)
T cd01822 83 PDQTRANLRQMIETAQAR--GAPVLLVG 108 (177)
T ss_pred HHHHHHHHHHHHHHHHHC--CCeEEEEe
Confidence 344566677777777654 33566665
No 423
>COG2360 Aat Leu/Phe-tRNA-protein transferase [Posttranslational modification, protein turnover, chaperones]
Probab=20.15 E-value=43 Score=28.03 Aligned_cols=62 Identities=11% Similarity=0.158 Sum_probs=45.7
Q ss_pred cccceeeeecCCCCCCCCCCCCccc-ccccccchhhhccccCCCCcCCCCCCChhhHHHHHHhhhcC
Q 015401 13 IRPITSVHVSTKAMPYNHPHPSLEV-TGGALHTFLPALKTLSRPYSPFPVIGWNCHVETIFAAFFRS 78 (407)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~y~p~p~~~~~~~~qt~~~~~~~~ 78 (407)
.-|-...|+ +|+|+.......-++ +|.++..++..|.+- ++.++..| .|..+|++|..+...
T Consensus 56 vi~~d~fhv-~rsl~k~lr~~~~~v~~n~aF~~Vi~~CA~~-~~~r~~TW--I~~~~~~aY~~Lh~~ 118 (221)
T COG2360 56 VLPPDDFHI-SRSLKKFLRQSPYRVRVNYAFAAVIEGCAAT-RPPRDGTW--INDEIREAYHKLHEM 118 (221)
T ss_pred eeccccccc-cHHHHHHHccCCeEEEechhHHHHHHHHhcc-CCCCCCcc--cCHHHHHHHHHHHHh
Confidence 335555888 888887777544443 578899999999764 44488777 689999999988653
No 424
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=20.05 E-value=1.6e+02 Score=25.54 Aligned_cols=20 Identities=30% Similarity=0.112 Sum_probs=17.9
Q ss_pred EEEEechhHHHHHHHHhccC
Q 015401 189 YAVGWSLGANILIRYLGHES 208 (407)
Q Consensus 189 ~lvG~S~Gg~ia~~~a~~~p 208 (407)
.++|-|.|+.++..++...+
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCC
Confidence 89999999999999987654
Done!