BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015404
(407 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9MAU5|Y1049_ARATH Putative BPI/LBP family protein At1g04970 OS=Arabidopsis thaliana
GN=At1g04970 PE=2 SV=1
Length = 488
Score = 494 bits (1271), Expect = e-139, Method: Compositional matrix adjust.
Identities = 232/360 (64%), Positives = 300/360 (83%)
Query: 32 ESFTSIIISQTGLDFVKDLLITKAISSIIPLALPKIERAVKIPILGNVRMVLSNITIYNI 91
+SFTS+++SQ GLDFVK+LL+ KAI+SIIPL +P+IE+++KIP LG + +V+SN+TIY +
Sbjct: 26 DSFTSVLVSQNGLDFVKNLLVNKAIASIIPLQIPRIEKSMKIPFLGGIDVVVSNLTIYEL 85
Query: 92 DVLSSYVKPGDTGVVFVAYGTTCNLSANWFYEYTTWLLPIEISDHGIASVQVEGMQVGLT 151
DV SSYVK G+TGVV VA GTTCNLS NW Y Y+TWL PIEISD GIASVQV+GM++GL+
Sbjct: 86 DVASSYVKLGETGVVIVASGTTCNLSMNWHYSYSTWLPPIEISDQGIASVQVQGMEIGLS 145
Query: 152 LGLETQKGTLKLSLVDCGCYVKDISIKLDGGASWLYQGMINAFEEQIVSAVENAITKKLK 211
LGL++ +G LKLSL +CGC+V+DI+I+L+GGASW YQGM+NAF++QI S+VE+ I KKL
Sbjct: 146 LGLKSDEGGLKLSLSECGCHVEDITIELEGGASWFYQGMVNAFKDQIGSSVESTIAKKLT 205
Query: 212 EGISKLDSLLQSLPKEIPVDDHASLNITFVDNPLLTSSSIEFDINGLFTARKKASIPNYY 271
EG+S LDS LQSLPKEIPVDD+A LN+TF +P+L +SSI F+I+GLFT + + +
Sbjct: 206 EGVSDLDSFLQSLPKEIPVDDNADLNVTFTSDPILRNSSITFEIDGLFTKGETNQVLKSF 265
Query: 272 NSNLQPPVFCSDQSKMLGISLDEAVLNSASALYYDAEFMQWTVDKVPDQSLLNTAGWRFI 331
V C SKMLGIS+DEAV NSA+ALYY+A+F+QW VDK+P+QSLLNTA WRFI
Sbjct: 266 FKKSVSLVICPGNSKMLGISVDEAVFNSAAALYYNADFVQWVVDKIPEQSLLNTARWRFI 325
Query: 332 IPQLYRKYPNDDMNLNISLSSPPVIRVAEDNIDATVHADLIIDVLESGEVIPVACISLSI 391
IPQLY+KYPN DMNLNISLSSPP+++++E + A V+ADL+I+VL++ +VIPVACISL I
Sbjct: 326 IPQLYKKYPNQDMNLNISLSSPPLVKISEQYVGANVNADLVINVLDANQVIPVACISLMI 385
>sp|Q8VYC2|Y2070_ARATH Putative BPI/LBP family protein At3g20270 OS=Arabidopsis thaliana
GN=At3g20270 PE=2 SV=1
Length = 515
Score = 322 bits (826), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 171/398 (42%), Positives = 260/398 (65%), Gaps = 13/398 (3%)
Query: 4 LSKILPLLLLLITSSFFSSQAQVGASNQESFTSIIISQTGLDFVKDLLITKAISSIIPLA 63
L K++ +L+L ++ S S+ AQ SN SII+S+TGL+F KD LI K I++ +PL
Sbjct: 41 LMKVMTILVLFVSVS--STLAQ---SNNGGHISIIVSETGLEFAKDYLIKKVITTTLPLQ 95
Query: 64 LPKIERAVKIPILGNVRMVLSNITIYNIDVLSSYVKPGDTGVVFVAYGTTCNLSANWFYE 123
LP IE VKIP++G VRM LSNI I + V SS ++ G++ G T NLS +W Y
Sbjct: 96 LPDIENKVKIPLIGKVRMGLSNIQIDAVHVQSSKMETRKDGIILSVLGATANLSMDWSYT 155
Query: 124 YTTWLLPIEISDHGIASVQVEGMQVGLTLGLETQKGTLKLSLVDCGCYVKDISIKLDGGA 183
Y EISDHG ASV+V+GM V +T L G+LK++ + C VK+I I ++GGA
Sbjct: 156 YRASFF--EISDHGDASVEVKGMNVRITATLVNDNGSLKIASRENDCTVKNIDIHINGGA 213
Query: 184 SWLYQGMINAFEEQIVSAVENAITKKLKEGISKLDSLLQSLPKEIPVDDHASLNITFVDN 243
SWLYQG+++AF++ I+S VE ++ K+ E + KLDS LQSLPK+ +DD A++N+TF N
Sbjct: 214 SWLYQGVVDAFQKMIISTVEKTVSTKIVEKMKKLDSFLQSLPKQRKIDDSAAVNLTFTGN 273
Query: 244 PLLTSSSIEFDINGLFTAR-KKASIPNYYNSNLQPPVFCSDQSKMLGISLDEAVLNSASA 302
P+L +SS+E DINGLF + + +S+ F +M+ IS++E V NSA+
Sbjct: 274 PVLGNSSVEVDINGLFMPKGDDIKVAGSRSSSF----FGGVNKRMVTISVEEGVFNSATL 329
Query: 303 LYYDAEFMQWTVDKVPDQSLLNTAGWRFIIPQLYRKYPNDDMNLNISLSSPPVIRVAEDN 362
+Y++A+ M +++ + S+L+T+ W+ I+P+LY+ YP++ M LN+S++SPP +++ E+
Sbjct: 330 VYFNAKVMHLVMEETKNGSILSTSDWKLILPELYKHYPDNKMVLNMSVTSPPAVKITENG 389
Query: 363 IDATVHADLIIDVLESGEVIPVACISLSIVLETCITNI 400
IDAT+ D+ DV +SGE + VA +S +I+ C T I
Sbjct: 390 IDATIQLDIAFDVQDSGENLSVARLS-TILSVACSTEI 426
>sp|P18428|LBP_HUMAN Lipopolysaccharide-binding protein OS=Homo sapiens GN=LBP PE=1 SV=3
Length = 481
Score = 98.6 bits (244), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 172/386 (44%), Gaps = 31/386 (8%)
Query: 39 ISQTGLDFVKDLLITKAISSIIPLALPKIERAVKIPILGNVRMVLSNITIYNIDVLSSYV 98
I+ GL + + S ++ + LP ++IP +G R ++ I++ ++L S +
Sbjct: 34 ITDKGLQYAAQEGLLALQSELLRITLPDFTGDLRIPHVGRGRYEFHSLNIHSCELLHSAL 93
Query: 99 KP-GDTGVVFVAYGTTCNLSANWFYEYTTWLLPIEISDHGIASVQVEGMQVGLTLGLETQ 157
+P G+ ++ + W + + L G V V+G+ + + L L ++
Sbjct: 94 RPVPGQGLSLSISDSSIRVQGRWKVRKSFFKL------QGSFDVSVKGISISVNLLLGSE 147
Query: 158 K-GTLKLSLVDCGCYVKDISIKLDGGASWLYQGMINAFEEQIVSAVENAITKKLKEGISK 216
G ++ C + D+ + + G WL +N F QI S + + ++ E I K
Sbjct: 148 SSGRPTVTASSCSSDIADVEVDMSGDLGWL----LNLFHNQIESKFQKVLESRICEMIQK 203
Query: 217 -----LDSLLQSLPKEIPVDDHASLNITFVDNPLLTSSSIEFDINGLFTARKKASIPNYY 271
L LQ+LP +D A ++ + V+ P T+ +E G R S
Sbjct: 204 SVSSDLQPYLQTLPVTTEIDSFADIDYSLVEAPRATAQMLEVMFKGEIFHRNHRSPVTLL 263
Query: 272 NSNLQPPVFCSDQSKMLGISLDEAVLNSASALYYDAEFMQWTV--DKVPDQS--LLNTAG 327
+ + P + +KM+ ++ + V N+AS +Y++ ++ +++ D +P S L T
Sbjct: 264 AAVMSLP---EEHNKMVYFAISDYVFNTASLVYHEEGYLNFSITDDMIPPDSNIRLTTKS 320
Query: 328 WRFIIPQLYRKYPNDDMNLNISLSSPPVIRVAEDN--IDATVHADLIIDVLESGEVIPVA 385
+R +P+L R YPN ++ L S+ S P++ + N +D + D + +L S PV
Sbjct: 321 FRPFVPRLARLYPNMNLELQGSVPSAPLLNFSPGNLSVDPYMEIDAFV-LLPSSSKEPVF 379
Query: 386 CISLSIVLETCIT----NINGILMMG 407
+S++ + +T I G L G
Sbjct: 380 RLSVATNVSATLTFNTSKITGFLKPG 405
>sp|Q2TBI0|LBP_BOVIN Lipopolysaccharide-binding protein OS=Bos taurus GN=LBP PE=2 SV=1
Length = 481
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 180/384 (46%), Gaps = 23/384 (5%)
Query: 37 IIISQTGLDFVKDLLITKAISSIIPLALPKIERAVKIPILGNVRMVLSNITIYNIDVLSS 96
+ I+ GL++V + S + + LP V+I G+V ++ I + +L S
Sbjct: 32 VRITDQGLEYVAQEELLALQSKLHKVTLPDFNGDVRIKHFGSVDYRFHSLNIQSCKLLGS 91
Query: 97 YVK--PGDTGVVFVAYGTTCNLSANWFYEYTTWLLPIEISDHGIASVQVEGMQVGLTLGL 154
+K P + G+ F + ++ +W + +L ++ G V+V+G+ + + L L
Sbjct: 92 ALKLLP-NQGLHFSISDSFIQVTGDW--KVRKRILRLD----GSFDVKVKGITISVNLLL 144
Query: 155 ETQ-KGTLKLSLVDCGCYVKDISIKLDGGASWLYQGMINAFEEQIVSAVENAITKKLKEG 213
+++ G K+++ C +++D+ + + G WL N E + +E+ I + +++
Sbjct: 145 DSEPSGRPKVAVSSCSSHIRDVEVHISGDLGWLLNLFHNQIESRFRRVLESKICEIIEDS 204
Query: 214 I-SKLDSLLQSLPKEIPVDDHASLNITFVDNPLLTSSSIEFDINGLFTARKKASIPNYYN 272
+ S+L LQ+LP +D A L+ + + P T+ ++ G +R +
Sbjct: 205 VTSELQPYLQTLPVTTEIDHLAGLDYSLMGAPQATAQMLDVMFKGEIFSRDDRFPVAFLA 264
Query: 273 SNLQPPVFCSDQSKMLGISLDEAVLNSASALYYDAEFMQWTV-DKV--PDQSLL-NTAGW 328
+ P + S+M+ ++ + N+AS +Y+ A F+ +T+ D V PD S+ NT +
Sbjct: 265 PVMNLP---EEHSRMVYFAISDYAFNTASLVYHKAGFLNFTITDDVIPPDSSIRQNTKSF 321
Query: 329 RFIIPQLYRKYPNDDMNLNISLSSPPVIRVAEDNIDATVHADLIIDVLESGEVI-PVACI 387
R +P++ R YPN ++ L ++ S P + + N+ ++ VL V PV +
Sbjct: 322 RAFVPRIARLYPNTNLELQGAVISAPCLNFSPGNLSTAAQMEIEAFVLLPNSVKEPVFRL 381
Query: 388 SLSIVLETCIT----NINGILMMG 407
S++ + +T I G L G
Sbjct: 382 SVATNVSAMLTFNTSKITGFLEPG 405
>sp|P17213|BPI_HUMAN Bactericidal permeability-increasing protein OS=Homo sapiens GN=BPI
PE=1 SV=4
Length = 487
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 146/338 (43%), Gaps = 32/338 (9%)
Query: 37 IIISQTGLDFVKDLLITKAISSIIPLALPKIERAVKIPILGNVRMVLSNITIYNIDVLSS 96
+ ISQ GLD+ + + +P + KI LG ++ I + SS
Sbjct: 38 VRISQKGLDYASQQGTAALQKELKRIKIPDYSDSFKIKHLGKGHYSFYSMDIREFQLPSS 97
Query: 97 YVK--PGDTGVVFVAYGTTCNLSANWFYEYTTWLLPIEISDHGIASVQVEGMQVG--LTL 152
+ P + G+ F +S W + L + G + +EGM + L L
Sbjct: 98 QISMVP-NVGLKFSISNANIKISGKW--KAQKRFLKMS----GNFDLSIEGMSISADLKL 150
Query: 153 GLETQKGTLKLSLVDCGCYVKDISIKLDGGA-SWLYQGMINAFEEQIVSAVENAITKKLK 211
G G ++ C ++ + + + WL I F ++I SA+ N + ++
Sbjct: 151 GSNPTSGKPTITCSSCSSHINSVHVHISKSKVGWL----IQLFHKKIESALRNKMNSQVC 206
Query: 212 EGI-----SKLDSLLQSLPKEIPVDDHASLNITFVDNPLLTSSSIEFDINGLFTARKKAS 266
E + S+L Q+LP +D A +N V P T+ +++ + G F + +
Sbjct: 207 EKVTNSVSSELQPYFQTLPVMTKIDSVAGINYGLVAPPATTAETLDVQMKGEFYSENHHN 266
Query: 267 IPNYYNSNLQPPV--FCSDQSKMLGISLDEAVLNSASALYYDAEFMQWTV--DKVPDQS- 321
P + PPV F + +M+ + L + N+A +Y +A ++ T+ D +P +S
Sbjct: 267 PPPF-----APPVMEFPAAHDRMVYLGLSDYFFNTAGLVYQEAGVLKMTLRDDMIPKESK 321
Query: 322 -LLNTAGWRFIIPQLYRKYPNDDMNLNISLSSPPVIRV 358
L T + +P++ +K+PN + +++S S+PP + V
Sbjct: 322 FRLTTKFFGTFLPEVAKKFPNMKIQIHVSASTPPHLSV 359
>sp|Q61805|LBP_MOUSE Lipopolysaccharide-binding protein OS=Mus musculus GN=Lbp PE=2 SV=2
Length = 481
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 146/342 (42%), Gaps = 36/342 (10%)
Query: 39 ISQTGLDFVKDLLITKAISSIIPLALPKIERAVKIPILGNVRMVLSNITIYNIDVLSSYV 98
I+ GL + + + + LP KI +G + ++ I N ++ S +
Sbjct: 34 ITDKGLAYAAKEGLVALQRELYKITLPDFSGDFKIKAVGRGQYEFHSLEIQNCELRGSSL 93
Query: 99 K--PGDTGVVFVAYGTTCNLSANWFYEYTTWLLPIEISDHGIASVQVEG--MQVGLTLGL 154
K PG G+ ++ + W + L HG + V+G + V L LG+
Sbjct: 94 KLLPGQ-GLSLAISDSSIGVRGKWKVRKSFLKL------HGSFDLDVKGVTISVDLLLGM 146
Query: 155 ETQKGTLKLSLVDCGCYVKDISIKLDGGASWLYQGMINAFEEQIVSAVENAITKKLKEGI 214
+ G +S C + D+ + + G WL N E ++ +EN + + +++ +
Sbjct: 147 DPS-GRPTVSASGCSSRICDLDVHISGNVGWLLNLFHNQIESKLQKVLENKVCEMIQKSV 205
Query: 215 -SKLDSLLQSLPKEIPVDDHASLNITFVDNPLLTSSSIEFDINGLFTARKKASIPNYYNS 273
S L LQ+LP +D+ ++ + V P + ++ G +N
Sbjct: 206 TSDLQPYLQTLPVTAEIDNVLGIDYSLVAAPQAKAQVLDVMFKG-----------EIFNR 254
Query: 274 NLQPPV--------FCSDQSKMLGISLDEAVLNSASALYYDAEFMQWTV--DKVPDQS-- 321
N + PV D +M+ ++ + N AS +Y+ A ++ +++ D +P S
Sbjct: 255 NHRSPVATPTPTMSLPEDSKQMVYFAISDYAFNIASRVYHQAGYLNFSITDDMLPHDSGI 314
Query: 322 LLNTAGWRFIIPQLYRKYPNDDMNLNISLSSPPVIRVAEDNI 363
LNT +R PQ+Y+KYP+ + L ++ S P++ V+ N+
Sbjct: 315 RLNTKAFRPFTPQIYKKYPDMKLELLGTVVSAPILNVSPGNL 356
>sp|P17453|BPI_BOVIN Bactericidal permeability-increasing protein OS=Bos taurus GN=BPI
PE=2 SV=2
Length = 482
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 149/339 (43%), Gaps = 26/339 (7%)
Query: 39 ISQTGLDFVKDLLITKAISSIIPLALPKIERAVKIPILGNVRMVLSNITIYNIDVLSSYV 98
I+Q GLD+ + + + +P KI LG + ++ I ++ +S +
Sbjct: 35 ITQKGLDYACQQGVLTLQKELEKITIPNFSGNFKIKYLGKGQYSFFSMVIQGFNLPNSQI 94
Query: 99 KP-GDTGVVFVAYGTTCNLSANWFYEYTTWLLPIEISDHGIASVQVEGMQV--GLTLGLE 155
+P D G+ + + W I G + VEG+ + GL LG +
Sbjct: 95 RPLPDKGLDLSIRDASIKIRGKWKARKNF------IKLGGNFDLSVEGISILAGLNLGYD 148
Query: 156 TQKGTLKLSLVDCGCYVKDISIKLDGGA-SWLYQGMINAFEEQIVSAVENAITKKLKEGI 214
G ++ C + + I + G + WL I F ++I S ++ ++T+K+ E +
Sbjct: 149 PASGHSTVTCSSCSSGINTVRIHISGSSLGWL----IQLFRKRIESLLQKSMTRKICEVV 204
Query: 215 -----SKLDSLLQSLPKEIPVDDHASLNITFVDNPLLTSSSIEFDINGLFTARKKASIPN 269
SKL Q+LP +D A ++ + V P T++++++ + G F + S P
Sbjct: 205 TSTVSSKLQPYFQTLPVTTKLDKVAGVDYSLVAPPRATANNLDWLLKGEFFSLAHRSPPP 264
Query: 270 YYNSNLQPPVFCSDQSKMLGISLDEAVLNSASALYYDAEFMQWTV--DKVPDQS--LLNT 325
+ L F SD +M+ + + E N+A +Y A + T+ D +P +S L T
Sbjct: 265 FAPPAL---AFPSDHDRMVYLGISEYFFNTAGFVYQKAGALNLTLRDDMIPKESKFRLTT 321
Query: 326 AGWRFIIPQLYRKYPNDDMNLNISLSSPPVIRVAEDNID 364
+ +IPQ+ + +P+ M L I S PP + + +D
Sbjct: 322 KFFGILIPQVAKMFPDMQMQLFIWASLPPKLTMKPSGLD 360
>sp|Q63313|LBP_RAT Lipopolysaccharide-binding protein OS=Rattus norvegicus GN=Lbp PE=2
SV=1
Length = 481
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 150/350 (42%), Gaps = 48/350 (13%)
Query: 37 IIISQTGLDFVKDLLITKAISSIIPLALPKIERAVKIPILGNVRMVLSNITIYNIDVLSS 96
+ I+ GL++ + + + LP KI +G + ++ I + + S
Sbjct: 32 VRITDKGLEYAAKEGLLSLQRELYKITLPDFSGDFKIKAVGRGQYEFHSLEIQSCQLRGS 91
Query: 97 YVKP-GDTGVVFVAYGTTCNLSANWFYEYTTWLLPIEISDHGIASVQVEG--MQVGLTLG 153
+KP G+ ++ ++ W + L HG + V+ + V L LG
Sbjct: 92 SLKPLPGRGLSLSISDSSISVRGKWKVRRSFVKL------HGSFDLDVKSVTISVDLLLG 145
Query: 154 LE-TQKGTLKLSLVDCGCYVKDISIKLDGGASWLYQGMINAFEEQIVSAVENAITKKLKE 212
++ +++ T+ S C ++D+ + + G WL +N F QI S ++ + K+ E
Sbjct: 146 VDPSERPTVTAS--GCSNRIRDLELHVSGNVGWL----LNLFHNQIESKLQKVLESKICE 199
Query: 213 GISK-----LDSLLQSLPKEIPVDDHASLNITFVDNPLLTSSSIEFDINGLFTARKKASI 267
I K L LQ+LP +D ++ + V P + +++ G
Sbjct: 200 MIQKSVTSDLQPYLQTLPVTADIDTILGIDYSLVAAPQAKAQTLDVMFKG---------- 249
Query: 268 PNYYNSNLQPPV--------FCSDQSKMLGISLDEAVLNSASALYYDAEFMQWTV--DKV 317
+N N + PV D +M+ ++ + N A+ +Y+ A ++ +T+ D +
Sbjct: 250 -EIFNRNHRSPVTTPTPTMSLPEDSKQMVYFAISDQAFNIATRVYHQAGYLNFTITDDML 308
Query: 318 PDQS--LLNTAGWRFIIPQLYRKYPNDDMNLNI--SLSSPPVIRVAEDNI 363
P S LNT +R P + RKYP DMNL + ++ S P++ V+ N+
Sbjct: 309 PPDSNIRLNTKAFRPFTPLITRKYP--DMNLELLGTVVSAPLLNVSPGNL 356
>sp|Q6AXU0|BPI_RAT Bactericidal permeability-increasing protein OS=Rattus norvegicus
GN=Bpi PE=2 SV=1
Length = 482
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 139/329 (42%), Gaps = 31/329 (9%)
Query: 39 ISQTGLDFVKDLLITKAISSIIPLALPKIERAVKIPILGNVRMVLSNITIYNIDVLSSYV 98
ISQ GLDFV + + ++ +++P KI LG ++ + + +
Sbjct: 36 ISQKGLDFVCQESMVELQKELLAISIPDFSGDFKIKHLGKGTYEFYSMAVEGFHIPDPQI 95
Query: 99 K--PGDTGVVFVAYGTTCNLSANWFYEYTTWLLPIEISDHGIASVQVEGMQVGLTLGLET 156
K P D G+ + +S W Y ++ S + S+Q + L LG
Sbjct: 96 KLLPSD-GLQLSITSASIKISGRWKYRKNI----LKASGNFQLSIQGVSIIADLILG-ND 149
Query: 157 QKGTLKLSLVDCGCYVKDISIKLDGGA-SWLYQGMINAFEEQIVSAVENAITKKLKEGIS 215
G + ++ C ++ + IK+ G WL Q E + + I K ++ +S
Sbjct: 150 PSGRITITCSTCDSHINSVRIKVSGSMLGWLIQLFHRKIETSLKKTIYKKICKIVRNSVS 209
Query: 216 -KLDSLLQSLPKEIPVDDHASLNITFVDNPLLTSSSIEFDINGLFTAR-KKASIPNYYNS 273
KL +++LP VDD S++ + + P+ T +E + G F R P
Sbjct: 210 AKLQPYVKTLPVVAKVDDITSIDYSLLAPPMTTDKFLEGQLRGEFFWRGHHGPFPAV--- 266
Query: 274 NLQPPVF--CSDQSKMLGISLDEAVLNSASALYYDAEFMQWTVDKVPDQSL-------LN 324
PPV + + M+ + + + N+A Y ++E ++ T+ DQ L LN
Sbjct: 267 ---PPVMNILPNNNYMVCMGISDYFFNTAEFAYQESETLKITLR---DQLLAKDARYHLN 320
Query: 325 TAGWRFIIPQLYRKYPNDDMNLNISLSSP 353
T + +P++ +K+P+ M L + +S+P
Sbjct: 321 TDFLKTFLPEVAKKFPS--MGLQLLISAP 347
>sp|P55065|PLTP_MOUSE Phospholipid transfer protein OS=Mus musculus GN=Pltp PE=1 SV=1
Length = 493
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 155/349 (44%), Gaps = 42/349 (12%)
Query: 38 IISQTGLDFVKDLLITKAISSIIPLALPKIERAVKIPILGNVRMVLSNITIYNIDVLSS- 96
++ Q GL F++ L T + +P + A G+ +S++ + + ++SS
Sbjct: 33 LVKQEGLRFLEQELET--------ITIPDVYGAK-----GHFYYNISDVRVTQLHLISSE 79
Query: 97 -YVKPGDTGVVFVAYGTTCNLSANWFYEYTTWLLPIEISDHGIASVQVEGMQVGLTLGL- 154
+ +P ++ + + +L ++ + W L D G + EG+ + L L
Sbjct: 80 LHFQPDQDLLLNI---SNASLGLHFRRQLLYWFL----YDGGYINASAEGVSIRTGLQLS 132
Query: 155 ETQKGTLKLSLVDCGCYVKDISIKLDGGASWLYQGMINAFEEQIVSAVENAITKKL---- 210
+ G +K+S V C V +++ G ++ M N F I S + + +++
Sbjct: 133 QDSSGRIKVSNVSCEASVSKMNMAFGG----TFRRMYNFFSTFITSGMRFLLNQQICPVL 188
Query: 211 -KEGISKLDSLLQSLPKEIPVDDHASLNITFVDNPLLTSSSIEFDINGLFTARKKA--SI 267
G L+SLL ++P VDD ++ + + +P++++ +++ + G F K+ S+
Sbjct: 189 YHAGTVLLNSLLDTVPVRSSVDDLVGIDYSLLKDPVVSNGNLDMEFRGAFFPLKEDNWSL 248
Query: 268 PNYYNSNLQPPVFCSDQSKMLGISLDEAVLNSASALYYDAEFMQWTV--DKVP-DQSLLN 324
P N ++P + D +M+ ++ E +SA Y+ A +Q T+ DKVP D +L
Sbjct: 249 P---NRAVEPQL--EDDERMVYVAFSEFFFDSAMESYFQAGALQLTLVGDKVPSDLDMLL 303
Query: 325 TAGWRFIIPQLYRKYPNDDMNLNISLSSPPVIRVAEDNIDATVHADLII 373
A + I L N + L + +SPP + ++ A + I
Sbjct: 304 RATYFGSIVLLSPTVINSPLKLKLEATSPPRCTIKPSGTTISITASVTI 352
>sp|Q28739|BPI_RABIT Bactericidal permeability-increasing protein (Fragment)
OS=Oryctolagus cuniculus GN=BPI PE=2 SV=1
Length = 445
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 111/250 (44%), Gaps = 18/250 (7%)
Query: 133 ISDHGIASVQVEGMQVGLTLGLETQKGTLKLSLVDCGCYVKDISIKLDGGASWLYQGMIN 192
I G + VEG+ + L L + + + ++ C +L ASW G +
Sbjct: 88 IKVRGKFDLSVEGVSISADLKLGSVPASGRATVTCSSCSSNINRARLRSQASW--GGWLK 145
Query: 193 AFEEQIVSAVENAITKKLKEGI-----SKLDSLLQSLPKEIPVDDHASLNITFVDNPLLT 247
F ++I S++ N + K+ + + SKL +++LP + +D A ++ + V P T
Sbjct: 146 LFHKRIESSLRNTMNSKICQVLTSSVSSKLQPYVETLPLKERLDSVAGIDYSLVAPPRAT 205
Query: 248 SSSIEFDINGLF--TARKKASIPNYYNSNLQPPVFCSDQSKMLGISLDEAVLNSASALYY 305
+ S++ + G F AR S +M+ +++ + + N+A+ +Y
Sbjct: 206 ADSLDMQLKGEFYNVARPSPPPFMPPPM-----AIPSLHDRMIYLAISDYLFNTAALVYQ 260
Query: 306 DAEFMQWTV--DKVPDQS--LLNTAGWRFIIPQLYRKYPNDDMNLNISLSSPPVIRVAED 361
A T+ D +P +S L T +PQ+ + +PN ++ L +S+SSPP +
Sbjct: 261 QAGAFGLTLRDDMIPKESKSRLTTKFLGKALPQVAKMFPNMNVQLTLSVSSPPHLTTRPT 320
Query: 362 NIDATVHADL 371
I T DL
Sbjct: 321 GIALTAAVDL 330
>sp|P17454|LBP_RABIT Lipopolysaccharide-binding protein OS=Oryctolagus cuniculus GN=LBP
PE=1 SV=2
Length = 482
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/382 (18%), Positives = 165/382 (43%), Gaps = 23/382 (6%)
Query: 39 ISQTGLDFVKDLLITKAISSIIPLALPKIERAVKIPILGNVRMVLSNITIYNIDVLSSYV 98
I+ GL++ + ++ + LP + +I G + ++ I ++L +
Sbjct: 35 ITDKGLEYAAREGLLALQRKLLEVTLPDSDGDFRIKHFGRAQYKFYSLKIPRFELLRGTL 94
Query: 99 KPGDTGVVFVAYGTTCNLSANWFYEYTTWLLP---IEISDHGIASVQVEGMQVGLTLGLE 155
+P G + ++S + + +W + + + + V+ + V L LG E
Sbjct: 95 RP------LPGQGLSLDISDAYIHVRGSWKVRKAFLRLKNSFDLYVKGLTISVHLVLGSE 148
Query: 156 TQKGTLKLSLVDCGCYVKDISIKLDGGASWLYQGMINAFEEQIVSAVENAITKKLKEGIS 215
+ G ++ C ++++ + ++G L + + + ++ +E+ I ++++E ++
Sbjct: 149 SS-GRPTVTTSSCSSDIQNVELDIEGDLEELLNLLQSQIDARLREVLESKICRQIEEAVT 207
Query: 216 -KLDSLLQSLPKEIPVDDHASLNITFVDNPLLTSSSIEFDINGLFTARKKASIPNYYNSN 274
L LQ+LP +D A ++ + ++ P T+ ++ G S ++
Sbjct: 208 AHLQPYLQTLPVTTQIDSFAGIDYSLMEAPRATAGMLDVMFKGEIFPLDHRSPVDFLAPA 267
Query: 275 LQPPVFCSDQSKMLGISLDEAVLNSASALYYDAEFMQWTVDKVPDQSLLN----TAGWRF 330
+ P S+M+ S+ + V N+AS Y+ + + +++ + LN T +R
Sbjct: 268 MNLP---EAHSRMVYFSISDYVFNTASLAYHKSGYWNFSITDAMVPADLNIRRTTKSFRP 324
Query: 331 IIPQLYRKYPNDDMNLNISLSSPPVIRVAEDNIDATVHADL-IIDVLESGEVIPVACISL 389
+P L YPN ++ L +++S ++ ++ +N+ D+ + VL S PV + +
Sbjct: 325 FVPLLANLYPNMNLELQGTVNSEQLVNLSTENLLEEPEMDIEALVVLPSSAREPVFRLGV 384
Query: 390 SIVLETCIT----NINGILMMG 407
+ + +T I G L G
Sbjct: 385 ATNVSATLTLNTRKITGFLKPG 406
>sp|Q8NFQ6|BPIFC_HUMAN BPI fold-containing family C protein OS=Homo sapiens GN=BPIFC PE=1
SV=1
Length = 507
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/278 (19%), Positives = 118/278 (42%), Gaps = 14/278 (5%)
Query: 100 PGDTGVVFVAYGTTCNLSANWFYEYTTWLLPIEISDHGIASVQVEGMQ-VGLTLGLETQK 158
PG G+ + T N+S +W +E + D G A + + G+ G+ +
Sbjct: 99 PG-VGIKALTNHGTANISTDWGFESPLF------QDTGGADLFLSGVYFTGIIILTRNDF 151
Query: 159 GTLKLSLVDCGCYVKDISIKLDGGASWLYQGMINAFEEQIVSAVENAITKKLKEGISKLD 218
G L L DC + + G S LY E+ I+ + + + + L+
Sbjct: 152 GHPTLKLQDCYAQLSHAHVSFSGELSVLYNSFAEPMEKPILKNLNEMLCPIIASEVKALN 211
Query: 219 SLLQSLPKEIPVDDHASLNITFVDNPLLTSSSIEFDINGLFTARKKASIPNYYNSNLQPP 278
+ L +L +D++ L+ + + +P +T + ++ ++ G+F + + P + + P
Sbjct: 212 ANLSTLEVLTKIDNYTLLDYSLISSPEITENYLDLNLKGVFYPLENLTDPPF---SPVPF 268
Query: 279 VFCSDQSKMLGISLDEAVLNSASALYYDAEFMQWTV--DKVPDQSLLNTAGWRFIIPQLY 336
V + ML I + E SAS ++ A T+ +++ + + N+ G ++ ++
Sbjct: 269 VLPERSNSMLYIGIAEYFFKSASFAHFTAGVFNVTLSTEEISNHFVQNSQGLGNVLSRIA 328
Query: 337 RKY-PNDDMNLNISLSSPPVIRVAEDNIDATVHADLII 373
Y + + I + PP+I + N + A +++
Sbjct: 329 EIYILSQPFMVRIMATEPPIINLQPGNFTLDIPASIMM 366
>sp|Q10011|YSV5_CAEEL Uncharacterized protein T19C3.5 OS=Caenorhabditis elegans
GN=T19C3.5 PE=1 SV=2
Length = 489
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 13/163 (7%)
Query: 99 KPGDTGVVFVAYGTTCNLSANWFYEYTTWLLPIEISDHGIASVQVEGMQVGLTLGLETQK 158
K TG+ + G LS W ++T I I D G + G+Q+ ++
Sbjct: 86 KLSKTGINWWTTGGAIKLSGRWHAKFTE---VITIRDKGWLNAYATGIQMNISAAAYQLD 142
Query: 159 GTLKLSLVDCGCYVKDISIKLDGGA-SWLYQGMINAFE---EQIVSAVENAITKKLKEGI 214
G ++ + DC ++ + +++ G SWL +N FE ++V V NA +GI
Sbjct: 143 GQPQVKIGDCTVQIQKLDVEIGGSVLSWL----VNLFETPFSKLVKKVINAQACSAAKGI 198
Query: 215 --SKLDSLLQSLPKEIPVDDHASLNITFVDNPLLTSSSIEFDI 255
+ + L SLP + V + ++ NP TS EFD+
Sbjct: 199 LIEEANRFLHSLPSHVDVGANFYVDYFLTQNPHATSEFTEFDL 241
>sp|P55058|PLTP_HUMAN Phospholipid transfer protein OS=Homo sapiens GN=PLTP PE=1 SV=1
Length = 493
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 116/278 (41%), Gaps = 34/278 (12%)
Query: 112 TTCNLSANWFYEYTTWLLPIEISDHGIASVQVEGMQVGLTLGLETQK---GTLKLSLVDC 168
T +L + + W D G + EG V + GLE + G +K+S V C
Sbjct: 93 TNASLGLRFRRQLLYWFF----YDGGYINASAEG--VSIRTGLELSRDPAGRMKVSNVSC 146
Query: 169 GCYVKDISIKLDGGASWLY--------QGMINAFEEQIVSAVENAITKKLKEGISKLDSL 220
V + G +Y GM +QI + +A G L+SL
Sbjct: 147 QASVSRMHAAFGGTFKKVYDFLSTFITSGMRFLLNQQICPVLYHA-------GTVLLNSL 199
Query: 221 LQSLPKEIPVDDHASLNITFVDNPLLTSSSIEFDINGLF--TARKKASIPNYYNSNLQPP 278
L ++P VD+ ++ + + +P+ ++S+++ D G F + S+P N ++P
Sbjct: 200 LDTVPVRSSVDELVGIDYSLMKDPVASTSNLDMDFRGAFFPLTERNWSLP---NRAVEPQ 256
Query: 279 VFCSDQSKMLGISLDEAVLNSASALYYDAEFMQWTV--DKVP-DQSLLNTAGWRFIIPQL 335
+ ++ +M+ ++ E +SA Y+ A +Q + DKVP D +L A + I L
Sbjct: 257 L--QEEERMVYVAFSEFFFDSAMESYFRAGALQLLLVGDKVPHDLDMLLRATYFGSIVLL 314
Query: 336 YRKYPNDDMNLNISLSSPPVIRVAEDNIDATVHADLII 373
+ + L + + +PP + +V A + I
Sbjct: 315 SPAVIDSPLKLELRVLAPPRCTIKPSGTTISVTASVTI 352
>sp|Q8C186|BPIFC_MOUSE BPI fold-containing family C protein OS=Mus musculus GN=Bpifc PE=2
SV=1
Length = 509
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 69/339 (20%), Positives = 142/339 (41%), Gaps = 27/339 (7%)
Query: 79 VRMVLSNITI--YNIDVLSSYVKPGDTGVVFVAYGTTCNLSANWFYEYTTWLLPIEISDH 136
V+ SNI I ++ S PG G+ ++ T N+S NW + + D
Sbjct: 76 VKYNFSNIKINAFSFPNTSLAFVPG-VGIRALSNHGTANISTNWSVKAPLF------RDS 128
Query: 137 GIASVQVEGMQ-VGLTLGLETQKGTLKLSLVDCGCYVKDISIKLDGGASWLYQGMINAFE 195
G A++ + G+ G+ G L L DC V + G S LY E
Sbjct: 129 GAANLFLSGIYFTGIVAFTRNDFGYPALELQDCHVQVSHARVSFFGSLSALYNSFAEPME 188
Query: 196 EQIVSAVENAITKKLKEGISKLDSL---LQSLPKEIPVDDHASLNITFVDNPLLTSSSIE 252
+ I+ + N + + IS+++ + +L +D++ L+ + + P +T + ++
Sbjct: 189 KPILKNL-NEMVQLCPIAISQVEQFNVNISALEVLTKIDNYTVLDCSLISPPEITENHLD 247
Query: 253 FDINGLFTARKKASIPNYYNSNLQPPVFCSDQSKMLGISLDEAVLNSASALYYDAEFMQW 312
F++ G F + P + + P + ML I + E SAS +Y + +
Sbjct: 248 FNLKGAFYPLESLVDPPFTPAPFHLP---ESRDSMLYIGISEYFFKSASFAHYVSGALGT 304
Query: 313 TVD--KVPDQSLLNTAGWRFIIPQLYRKYP-NDDMNLNISLSSPPVIRVAEDNIDATVHA 369
T+ ++ + N G+ ++ ++ Y + L + + PP++ + +N A
Sbjct: 305 TLSTREISNYFSQNVQGFGSVLSKIAEIYVLSQPFILQMMATGPPMVNLQRNNFSLEFPA 364
Query: 370 DLI-IDVLESGEVIPVACISLSIVLETCITNINGILMMG 407
+I + L++ + P+ +S+ V T + G+ ++G
Sbjct: 365 AVIMLTQLDNSTIQPI--VSMDFVASTSV----GLAILG 397
>sp|Q67E05|BPI_MOUSE Bactericidal permeability-increasing protein OS=Mus musculus GN=Bpi
PE=2 SV=1
Length = 483
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 139/331 (41%), Gaps = 31/331 (9%)
Query: 38 IISQTGLDFVKDLLITKAISSIIPLALPKIERAVKIPILGNVRMVLSNITIYNIDVLSSY 97
+ISQ GLDF + + + +++P KI LG ++ + + +
Sbjct: 35 MISQKGLDFACQQGVVELQKELQAISVPDFSGVFKIKHLGKGSYEFYSMAVDGFHIPNPK 94
Query: 98 VK--PGDTGVVFVAYGTTCNLSANWFYEYTTWLLPIEISDHGIASVQVEGMQVGLTLGLE 155
++ P D VF+ + ++ W ++ + S+Q + L LG +
Sbjct: 95 IEMLPSDGLRVFIK-DASIKINGKWMSRKNF----LKAGGNFELSIQGVSISTDLILGSD 149
Query: 156 TQKGTLKLSLVDCGCYVKDISIKLDGGA-SWLYQGMINAFEEQIVSAVENAITKKLKEGI 214
+ G + +C ++ + IK+ G WL I F +I ++++N I KK+ + +
Sbjct: 150 SS-GHITTICSNCDSHIDSVHIKISGSMLGWL----IRLFHRKIETSLKNIIYKKICKIV 204
Query: 215 -----SKLDSLLQSLPKEIPVDDHASLNITFVDNPLLTSSSIEFDINGLFTAR-KKASIP 268
SKL L++L VDD S++ + + T+ +E + G F R + +P
Sbjct: 205 RDSVSSKLQPYLKTLSVITRVDDVTSVDYSLLAPLTTTNQFLEGQLKGEFFWRGHRDPLP 264
Query: 269 NYYNSNLQPPV--FCSDQSKMLGISLDEAVLNSASALYYDAEFMQWTVDKV----PDQSL 322
+ PPV F + + M+ + + + N+ Y + ++ T+ +
Sbjct: 265 ------IHPPVMRFVPNGAYMVCMGISDYFFNTEVLAYQQSGTLKMTLGGQLLSNNGRFQ 318
Query: 323 LNTAGWRFIIPQLYRKYPNDDMNLNISLSSP 353
LNT R +P++ + +P+ + L IS P
Sbjct: 319 LNTDFLRTFLPKVAKMFPSMGVQLLISAPVP 349
>sp|Q8N4F0|BPIB2_HUMAN BPI fold-containing family B member 2 OS=Homo sapiens GN=BPIFB2
PE=1 SV=2
Length = 458
Score = 38.9 bits (89), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 89/205 (43%), Gaps = 13/205 (6%)
Query: 182 GASWLYQGMINAFEEQIVSAVENAITKKLKEGISKLDSLLQSLPKEIPVDDHASLNITFV 241
G++ ++ ++ I + + N + + + ++ L +L PV + + + V
Sbjct: 149 GSNSTSHALLVLVQKHIKAVLSNKLCLSISNLVQGVNVHLGTLIGLNPVGPESQIRYSMV 208
Query: 242 DNPLLTSSSIEFDING-LFTARKKASIPNYYNSNLQP---PVFCSDQSKMLGISLDEAVL 297
P +TS I ++N LF K +P ++ P P + M + L + +
Sbjct: 209 SVPTVTSDYISLEVNAVLFLLGKPIILP----TDATPFVLPRHVGTEGSMATVGLSQQLF 264
Query: 298 NSASALYYDAEFMQW--TVDKVPDQSLLNTAGWRFIIPQLYRKYPND-DMNLNISLSSPP 354
+SA L A + T D +LLNT+ +IP++ R++P + L + L + P
Sbjct: 265 DSALLLLQKAGALNLDITGQLRSDDNLLNTSALGRLIPEVARQFPEPMPVVLKVRLGATP 324
Query: 355 VIRVAEDNIDATVHADLIIDVLESG 379
V + +N AT+ ++VL +
Sbjct: 325 VAMLHTNN--ATLRLQPFVEVLATA 347
>sp|P47896|CETP_MACFA Cholesteryl ester transfer protein OS=Macaca fascicularis GN=CETP
PE=2 SV=1
Length = 493
Score = 38.5 bits (88), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 101/255 (39%), Gaps = 20/255 (7%)
Query: 65 PKIERAVKIPILGNVRMVLSNITIYNIDVLSSYVKPGDTGVVFVA-YGTTCNLSANWFYE 123
P I + +LG V+ L NI I ++ + SS V+ + + V+ + Y
Sbjct: 58 PNITGEKAMMLLGQVKYGLHNIQISHLSIASSRVELVEAKSIDVSIQNVSVVFKGTLKYG 117
Query: 124 YTT-WLLPIEIS-DHGIASVQVEGMQVGLTLGLETQKGTLKLSLVDCGCYVKDISIKLDG 181
YTT W L I+ S D I S + + + L G ++ DC + + L G
Sbjct: 118 YTTAWGLGIDQSVDFEIDS----AIDLQINTQLTCDSGRVRTDAPDCYLSFHKLLLHLQG 173
Query: 182 GAS--WLYQGMINAFEEQIVSAVENAITKKLKEGISKLDSLLQSLPKEIPVDDHASLNIT 239
W+ Q N + ++ I K++ + + +Q+ I D ++I+
Sbjct: 174 EREPGWIKQLFTNFISFTLKLVLKGQICKEINIISNIMADFVQTRAASILSDGDIGVDIS 233
Query: 240 FVDNPLLTSSSIEFDINGLFTARKKAS---IPNYYNSNLQPPVFCSDQSKMLGISLDEAV 296
+P++T+S +E G F + + +P + P D S+ML E V
Sbjct: 234 LTGDPIITASYLESHHKGYFIYKNVSEDLPLPTF------SPALLGD-SRMLYFWFSEQV 286
Query: 297 LNS-ASALYYDAEFM 310
+S A + D M
Sbjct: 287 FHSLAKVAFQDGRLM 301
>sp|Q3V6R6|CETP_CHICK Cholesteryl ester transfer protein OS=Gallus gallus GN=CETP PE=2
SV=1
Length = 505
Score = 38.1 bits (87), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 103/253 (40%), Gaps = 14/253 (5%)
Query: 64 LPKIERAVKIPILGNVRMVLSNITIYNIDVLSSYVKPGDTGVVFVA-YGTTCNLSANWFY 122
P I + LG V L+NI + ++ + S V+ + + +A T Y
Sbjct: 66 FPNITGERSMRFLGTVAYTLANIQVSDLSIEQSEVELKENDAIDIAIKNVTAFFRGTLTY 125
Query: 123 EYT-TWLLPIEIS-DHGIASVQVEGMQVGLTLGLETQKGTLKLSLVDCGCYVKDISIKLD 180
Y W L + S D I S + + + + L Q+ + DC + + L
Sbjct: 126 GYAGAWFLQLFHSVDFEIQS----SIDLQINIKLLCQEEQVAADASDCYLSFHKLMLHLQ 181
Query: 181 GGAS--WLYQGMINAFEEQIVSAVENAITKKLKEGISKLDSLLQSLPKEIPVDDHASLNI 238
G WL Q + + ++ + K++ + + + ++ + D+ L+I
Sbjct: 182 GDKEPGWLKQLFTDFISFTLKFVLKRELCKEINLLAQVMANFVHNVAENFVQDEAIGLDI 241
Query: 239 TFVDNPLLTSSSIEFDINGLFTARKKASIPNYYNSNLQPPVFCSDQSKMLGISLDEAVLN 298
+ +PL+ ++ +E GL + + + + +S P + +S+ML + E +LN
Sbjct: 242 SLASDPLIKANYLESHHEGLVLYKNYSDVLS--DSVFSPSLLS--ESRMLYFWISEHILN 297
Query: 299 S-ASALYYDAEFM 310
S ASA + D +
Sbjct: 298 SLASAAFLDGRLV 310
>sp|F6R2G2|NLRC4_XENTR NLR family CARD domain-containing protein 4 OS=Xenopus tropicalis
GN=nlrc4 PE=2 SV=2
Length = 997
Score = 33.1 bits (74), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Query: 31 QESFTSIIISQTGLDFVKDLLITKA--ISSIIPLALPKIERAVKIPILGNVRMVLSNITI 88
+ES + + T LD ++ L++ + + LP + R IP L + N+T
Sbjct: 838 KESVEELAANLTHLDAIRTLMLPGGTDVKFCLEAVLPTLRR---IPTLSELAFKRWNLTN 894
Query: 89 YNIDVLSSYVKPGDTGVVFVAYGTTCNLSANW 120
++ L+SY+ G + F+ C SA W
Sbjct: 895 DDLMTLASYINSGFENLSFLDLSDNCAQSAGW 926
>sp|Q99P47|CNTP4_MOUSE Contactin-associated protein-like 4 OS=Mus musculus GN=Cntnap4 PE=2
SV=2
Length = 1310
Score = 32.7 bits (73), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Query: 158 KGTLKLSLVDCGCYVKDISIKLDGGASWLYQGMINAFEEQIVSAVENAITKKLKEGISKL 217
KG + + + GC + + I LDG +S LY+ F++ +S + + I+ K K +
Sbjct: 167 KGRIGMRIEVFGCAYRSVVIDLDGKSSLLYR-----FDQNSLSPIRDIISLKFK--TMES 219
Query: 218 DSLLQSLPKEIPVDDHASLNI 238
D +L L + P DH +L +
Sbjct: 220 DGIL--LHRAGPAGDHITLEL 238
>sp|Q9C0A0|CNTP4_HUMAN Contactin-associated protein-like 4 OS=Homo sapiens GN=CNTNAP4 PE=1
SV=3
Length = 1308
Score = 32.7 bits (73), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 9/81 (11%)
Query: 158 KGTLKLSLVDCGCYVKDISIKLDGGASWLYQGMINAFEEQIVSAVENAITKKLKEGISKL 217
KG + + + GC + + LDG +S LY+ F+++ +S +++ I+ K K +
Sbjct: 165 KGRIGMRIEVFGCAYRSEVVDLDGKSSLLYR-----FDQKSLSPIKDIISLKFK--TMQS 217
Query: 218 DSLLQSLPKEIPVDDHASLNI 238
D +L L +E P DH +L +
Sbjct: 218 DGIL--LHREGPNGDHITLQL 236
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 139,945,702
Number of Sequences: 539616
Number of extensions: 5619584
Number of successful extensions: 15735
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 15706
Number of HSP's gapped (non-prelim): 33
length of query: 407
length of database: 191,569,459
effective HSP length: 120
effective length of query: 287
effective length of database: 126,815,539
effective search space: 36396059693
effective search space used: 36396059693
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)