Query 015409
Match_columns 407
No_of_seqs 130 out of 215
Neff 5.5
Searched_HMMs 13730
Date Mon Mar 25 12:07:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015409.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/015409hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1r1ta_ a.4.5.5 (A:) SmtB repr 78.6 5.1 0.00037 30.4 8.6 83 17-108 4-87 (98)
2 d1b0na1 a.34.1.1 (A:74-108) Si 77.3 0.93 6.8E-05 28.6 3.0 21 340-360 8-28 (35)
3 d1u2wa1 a.4.5.5 (A:12-119) Cad 50.0 17 0.0012 27.7 6.3 80 31-111 19-99 (108)
4 d1r1ua_ a.4.5.5 (A:) Metal-sen 49.7 33 0.0024 25.3 7.8 78 34-113 9-88 (94)
5 d1vhca_ c.1.10.1 (A:) Hypothet 47.8 20 0.0014 30.9 7.1 120 250-396 5-136 (212)
6 d1stza1 a.4.5.51 (A:14-100) He 42.5 12 0.00085 28.0 4.0 43 238-282 31-73 (87)
7 d1ub9a_ a.4.5.28 (A:) Hypothet 41.2 29 0.0021 25.2 6.2 67 43-110 16-86 (100)
8 d1mxsa_ c.1.10.1 (A:) KDPG ald 38.6 29 0.0021 29.9 6.6 86 295-396 42-139 (216)
9 d2v9va2 a.4.5.35 (A:438-510) C 29.7 57 0.0042 22.5 6.0 61 313-399 6-66 (73)
10 d1wa3a1 c.1.10.1 (A:2-203) KDP 29.6 35 0.0025 28.9 5.5 88 294-396 33-132 (202)
11 d1wbha1 c.1.10.1 (A:1-213) KDP 28.3 23 0.0016 30.5 4.0 87 294-396 39-137 (213)
12 d1r7ja_ a.4.5.49 (A:) Sso10a ( 22.9 13 0.00096 27.8 1.2 27 169-196 39-66 (90)
13 d1dpua_ a.4.5.16 (A:) C-termin 21.7 35 0.0026 24.2 3.3 49 198-263 6-55 (69)
14 d1wj5a_ a.4.5.59 (A:) OB fold- 21.1 28 0.002 27.4 2.8 38 248-285 79-116 (120)
No 1
>d1r1ta_ a.4.5.5 (A:) SmtB repressor {Cyanobacteria (Synechococcus), pcc7942 [TaxId: 1129]}
Probab=78.58 E-value=5.1 Score=30.37 Aligned_cols=83 Identities=13% Similarity=0.147 Sum_probs=61.9
Q ss_pred hCCHHHHHHHhcCchhHHHHHhcCChhHHHHHHHHhcCCCCCChHHHHhhcCCcchhHHHHHHHHHhccceeeecC-CCc
Q 015409 17 SLTARDLDRLYENPFICEAILRSLPPLAKKYVMQMFYIDGAIPAKMMEEWVLPDGFTKHRVAIDRLVQLRLFSEEK-KKE 95 (407)
Q Consensus 17 ~Lp~~~~~~LY~~p~tclaifR~Lp~lak~~vmrlL~~~~~v~~~~l~~W~~~~~~~~~~~al~~L~~L~I~~~~~-~~~ 95 (407)
.+++++++.| -.+|+.|.+-.|.-|+++|. ++|....++..-.. -++......++.|++..|+...+ |..
T Consensus 4 ~~~pe~~~~l-------a~~~kaL~~p~Rl~Il~~L~-~~~~~v~ela~~l~-is~stvS~HL~~L~~aglV~~~r~G~~ 74 (98)
T d1r1ta_ 4 AIAPEVAQSL-------AEFFAVLADPNRLRLLSLLA-RSELCVGDLAQAIG-VSESAVSHQLRSLRNLRLVSYRKQGRH 74 (98)
T ss_dssp CCCHHHHHHH-------HHHHHHHCCHHHHHHHHHHT-TCCBCHHHHHHHHT-CCHHHHHHHHHHHHHTTSEEEEEETTE
T ss_pred cCCHHHHHHH-------HHHHHHhCCHHHHHHHHHHH-cCCcCHHHHHHHHC-cCHHHHHHHHHHHHHCCceEEEEECCE
Confidence 4566665544 57888888888888888884 68899999988664 35566778899999999998744 445
Q ss_pred eeEEeCHHHHHHH
Q 015409 96 TTYRLNSTFQSNL 108 (407)
Q Consensus 96 ~~~~Ln~~F~~~l 108 (407)
..|.||+..-..+
T Consensus 75 ~~Y~l~~~~i~~l 87 (98)
T d1r1ta_ 75 VYYQLQDHHIVAL 87 (98)
T ss_dssp EEEEESSHHHHHH
T ss_pred EEEEEChHHHHHH
Confidence 6799997764444
No 2
>d1b0na1 a.34.1.1 (A:74-108) SinR repressor dimerisation domain {Bacillus subtilis [TaxId: 1423]}
Probab=77.28 E-value=0.93 Score=28.56 Aligned_cols=21 Identities=24% Similarity=0.455 Sum_probs=19.0
Q ss_pred HHHHHHHcCCCHHHHHHHHhh
Q 015409 340 SLYNAFENGITAEQIISFLQQ 360 (407)
Q Consensus 340 Svr~Al~~GITA~QII~fL~~ 360 (407)
=|+.|+..||+-+|.-.||+-
T Consensus 8 lVkeAM~SGvSK~QFrEflef 28 (35)
T d1b0na1 8 LVRDAMTSGVSKKQFREFLDY 28 (35)
T ss_dssp HHHHHHHSCCCHHHHHHHHHH
T ss_pred HHHHHHHccCCHHHHHHHHHH
Confidence 489999999999999999973
No 3
>d1u2wa1 a.4.5.5 (A:12-119) Cadmium efflux system accessory protein CadC {Staphylococcus aureus [TaxId: 1280]}
Probab=49.97 E-value=17 Score=27.75 Aligned_cols=80 Identities=10% Similarity=0.039 Sum_probs=59.3
Q ss_pred hhHHHHHhcCChhHHHHHHHHhcCCCCCChHHHHhhcCCcchhHHHHHHHHHhccceeeecC-CCceeEEeCHHHHHHHH
Q 015409 31 FICEAILRSLPPLAKKYVMQMFYIDGAIPAKMMEEWVLPDGFTKHRVAIDRLVQLRLFSEEK-KKETTYRLNSTFQSNLR 109 (407)
Q Consensus 31 ~tclaifR~Lp~lak~~vmrlL~~~~~v~~~~l~~W~~~~~~~~~~~al~~L~~L~I~~~~~-~~~~~~~Ln~~F~~~lr 109 (407)
.....+|+.|.+-.|--|+..|..+++.+..++..=.. -+.......++.|++-.++...+ |....|.||+..-..+-
T Consensus 19 ~~~~~~~kaLadp~Rl~Il~~L~~~~~~~v~ela~~l~-~s~s~vS~HL~~L~~aGlv~~~r~G~~~~Y~l~~~~i~~ll 97 (108)
T d1u2wa1 19 SGVSQILKAIADENRAKITYALCQDEELCVCDIANILG-VTIANASHHLRTLYKQGVVNFRKEGKLALYSLGDEHIRQIM 97 (108)
T ss_dssp HHHHHHHHHHHSHHHHHHHHHHHHSSCEEHHHHHHHHT-CCHHHHHHHHHHHHHTTSEEEC----CCEEEESCHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHhCCCccHHHHHHHHc-cChhHHHHHHHHHHHCCeeEEEEECCEEEEEECHHHHHHHH
Confidence 33457889888889999999998888888888876443 35666778899999999998754 34468999988755554
Q ss_pred HH
Q 015409 110 KH 111 (407)
Q Consensus 110 ~a 111 (407)
.+
T Consensus 98 ~~ 99 (108)
T d1u2wa1 98 MI 99 (108)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 4
>d1r1ua_ a.4.5.5 (A:) Metal-sensing transcriptional repressor CzrA {Staphylococcus aureus [TaxId: 1280]}
Probab=49.71 E-value=33 Score=25.34 Aligned_cols=78 Identities=10% Similarity=0.181 Sum_probs=57.2
Q ss_pred HHHHhcCChhHHHHHHHHhcCCCCCChHHHHhhcCCcchhHHHHHHHHHhccceeeecC-CCceeEEeCHH-HHHHHHHH
Q 015409 34 EAILRSLPPLAKKYVMQMFYIDGAIPAKMMEEWVLPDGFTKHRVAIDRLVQLRLFSEEK-KKETTYRLNST-FQSNLRKH 111 (407)
Q Consensus 34 laifR~Lp~lak~~vmrlL~~~~~v~~~~l~~W~~~~~~~~~~~al~~L~~L~I~~~~~-~~~~~~~Ln~~-F~~~lr~a 111 (407)
..+|+.|.+-.|.-|+++|. +++....++..=+. -++.....-++.|++..|+...+ |....|.||.. +++-++.+
T Consensus 9 a~~fkaL~d~~Rl~Il~~L~-~~~~~v~el~~~l~-~s~~~vS~HL~~L~~~glv~~~r~G~~~~Y~l~~~~v~~ll~~~ 86 (94)
T d1r1ua_ 9 TEIFKALGDYNRIRIMELLS-VSEASVGHISHQLN-LSQSNVSHQLKLLKSVHLVKAKRQGQSMIYSLDDIHVATMLKQA 86 (94)
T ss_dssp HHHHHHTCSHHHHHHHHHHH-HCCBCHHHHHHHHT-CCHHHHHHHHHHHHHTTSEEEEEETTEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHH-cCCccHHHHHHHHC-CCHHHHHHHHHHHHHCCceEEEEECCEEEEEECcHHHHHHHHHH
Confidence 35889898888888888886 67888888876543 45666778899999999998744 44568999965 44444444
Q ss_pred HH
Q 015409 112 LI 113 (407)
Q Consensus 112 L~ 113 (407)
+.
T Consensus 87 l~ 88 (94)
T d1r1ua_ 87 IH 88 (94)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 5
>d1vhca_ c.1.10.1 (A:) Hypothetical protein HI0047 {Haemophilus influenzae [TaxId: 727]}
Probab=47.79 E-value=20 Score=30.87 Aligned_cols=120 Identities=23% Similarity=0.311 Sum_probs=79.2
Q ss_pred HHHHHHHhhcCceeeecCCCccccccchhhhhhccccccccccccceEEEeeCceEEEecCCHhHHHHHHHHHhhhhcCC
Q 015409 250 KSMIKDFADLGLVKLQQGRKENWFIPTKLATNLSMSLTDSSARKEGFIVVETNFRMYAYSTSKLHCEILRLFSKVEYQLP 329 (407)
Q Consensus 250 ~~~L~~L~d~GLvy~~~~~~~~~f~pT~La~~L~~~~~~~~~~~~g~IIVETNFrvYAYT~S~lqiaiL~lF~~l~~r~P 329 (407)
+++++.|.+.++|-.-+..+..- --+++-.|.. .|.=++|-=+| +|--. ....++..++|
T Consensus 5 ~~~~~~l~~~~iipvlr~~~~~~--~~~~~~al~~---------~Gi~~iEitl~------~~~a~---~~I~~l~~~~p 64 (212)
T d1vhca_ 5 QQIIEKLRELKIVPVIALDNADD--ILPLADTLAK---------NGLSVAEITFR------SEAAA---DAIRLLRANRP 64 (212)
T ss_dssp HHHHHHHHHHCEEEEECCSSGGG--HHHHHHHHHH---------TTCCEEEEETT------STTHH---HHHHHHHHHCT
T ss_pred HHHHHHHHHCCEEEEEeCCCHHH--HHHHHHHHHH---------CCCCEEEEeCC------ChhHH---HHHHHHHhcCC
Confidence 45889999999996555432111 1222222222 35555665554 33333 34455667899
Q ss_pred ceEEEE---eCHHHHHHHHHcCC-------CHHHHHHHHhhcCccccccCCCCCC--hhHHHHHHHHHHhcCceeeeCe
Q 015409 330 NLIVGA---ITKESLYNAFENGI-------TAEQIISFLQQNAHPRVADRMPSVP--ENVCDQIRLWESDLNRVEMTPA 396 (407)
Q Consensus 330 nlvvg~---iTReSvr~Al~~GI-------TA~QII~fL~~hAHp~m~~~~p~lP--~tV~dQIrLWe~Er~R~~~~~g 396 (407)
++.||. +|.|.+++|.+.|- .-++++.+-..+-. |.+| -|..+=..-|+.--+-+|+.|+
T Consensus 65 ~~~vGaGTV~~~~~~~~a~~aGa~FivSP~~~~~v~~~a~~~~i-------~~iPGv~TpsEi~~A~~~G~~~vK~FPA 136 (212)
T d1vhca_ 65 DFLIAAGTVLTAEQVVLAKSSGADFVVTPGLNPKIVKLCQDLNF-------PITPGVNNPMAIEIALEMGISAVKFFPA 136 (212)
T ss_dssp TCEEEEESCCSHHHHHHHHHHTCSEEECSSCCHHHHHHHHHTTC-------CEECEECSHHHHHHHHHTTCCEEEETTT
T ss_pred CceEeeeecccHHHHHHHHhhCCcEEECCCCCHHHHHHHHhcCC-------CccCCcCCHHHHHHHHHCCCCEEEEccc
Confidence 999997 99999999999995 45789999888866 4555 3666667778877777777764
No 6
>d1stza1 a.4.5.51 (A:14-100) Heat-inducible transcription repressor HrcA, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=42.46 E-value=12 Score=27.98 Aligned_cols=43 Identities=23% Similarity=0.281 Sum_probs=29.6
Q ss_pred ccccCCCCCHHHHHHHHHHhhcCceeeecCCCccccccchhhhhh
Q 015409 238 EAYNLNTLSEIQKSMIKDFADLGLVKLQQGRKENWFIPTKLATNL 282 (407)
Q Consensus 238 ~~Y~~~~lt~~q~~~L~~L~d~GLvy~~~~~~~~~f~pT~La~~L 282 (407)
+.+...--+.+-++.|..|.+.|+|. +...++++ .||..+..+
T Consensus 31 ~~~~l~~S~aTIRn~m~~LE~~G~l~-~~h~s~Gr-iPT~~g~r~ 73 (87)
T d1stza1 31 EVSNIEFSSATIRNDMKKLEYLGYIY-QPHTSAGR-IPTDKGLRF 73 (87)
T ss_dssp HHSCCCSCHHHHHHHHHHHHHTTSEE-CCSSCSCB-EECHHHHHH
T ss_pred HHhCCCCCHHHHHHHHHHHHHCCccc-CCCCCCCC-cccHHHHHH
Confidence 34444434678899999999999996 44444554 489876433
No 7
>d1ub9a_ a.4.5.28 (A:) Hypothetical protein PH1061 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=41.16 E-value=29 Score=25.23 Aligned_cols=67 Identities=9% Similarity=0.011 Sum_probs=49.6
Q ss_pred hHHHHHHHHhcCCCCCChHHHHhhcCCcchhHHHHHHHHHhccceeeec----CCCceeEEeCHHHHHHHHH
Q 015409 43 LAKKYVMQMFYIDGAIPAKMMEEWVLPDGFTKHRVAIDRLVQLRLFSEE----KKKETTYRLNSTFQSNLRK 110 (407)
Q Consensus 43 lak~~vmrlL~~~~~v~~~~l~~W~~~~~~~~~~~al~~L~~L~I~~~~----~~~~~~~~Ln~~F~~~lr~ 110 (407)
..+.-||..|+..++++.+++...+ .-.+......+++|.+..++... .+....|.|++.=++-++.
T Consensus 16 p~r~~IL~~L~~~~~~~~~eLa~~l-~is~~~vs~~l~~L~~~glV~~~~~~~d~r~~~~~LT~~G~~~~~~ 86 (100)
T d1ub9a_ 16 PVRLGIMIFLLPRRKAPFSQIQKVL-DLTPGNLDSHIRVLERNGLVKTYKVIADRPRTVVEITDFGMEEAKR 86 (100)
T ss_dssp HHHHHHHHHHHHHSEEEHHHHHHHT-TCCHHHHHHHHHHHHHTTSEEEEEECSSSCEEEEEECHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCeeHHHHHHHH-hhccccccHHHHHHhhhceeEEEEcCcCCccccccCCHHHHHHHHH
Confidence 3466688999888899999999876 35566677889999999999752 2234578999876554443
No 8
>d1mxsa_ c.1.10.1 (A:) KDPG aldolase {Pseudomonas putida [TaxId: 303]}
Probab=38.56 E-value=29 Score=29.87 Aligned_cols=86 Identities=21% Similarity=0.314 Sum_probs=60.9
Q ss_pred ceEEEeeCceEEEecCCHhHHHHHHHHHhhhhcCCceEEEE---eCHHHHHHHHHcCC-------CHHHHHHHHhhcCcc
Q 015409 295 GFIVVETNFRMYAYSTSKLHCEILRLFSKVEYQLPNLIVGA---ITKESLYNAFENGI-------TAEQIISFLQQNAHP 364 (407)
Q Consensus 295 g~IIVETNFrvYAYT~S~lqiaiL~lF~~l~~r~Pnlvvg~---iTReSvr~Al~~GI-------TA~QII~fL~~hAHp 364 (407)
|.=++|-=+| +|--...+ ..+..++|++.||. +|++.+++|.+.|. +-..++.+-..+-.|
T Consensus 42 Gi~~iEitl~------~p~a~~~i---~~l~~~~p~~~vGaGTV~~~~~~~~a~~aGa~FivsP~~~~~v~~~a~~~~i~ 112 (216)
T d1mxsa_ 42 GIRTLEVTLR------SQHGLKAI---QVLREQRPELCVGAGTVLDRSMFAAVEAAGAQFVVTPGITEDILEAGVDSEIP 112 (216)
T ss_dssp TCCEEEEESS------STHHHHHH---HHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSSEECSSCCHHHHHHHHHCSSC
T ss_pred CCCEEEEeCC------ChhHHHHH---HHHHHhCCCcceeeeeeecHHHHHHHHhCCCCEEECCCCcHHHHHHHHhcCCC
Confidence 5455554444 55544444 45666899999996 99999999999995 467888888887664
Q ss_pred ccccCCCCCC--hhHHHHHHHHHHhcCceeeeCe
Q 015409 365 RVADRMPSVP--ENVCDQIRLWESDLNRVEMTPA 396 (407)
Q Consensus 365 ~m~~~~p~lP--~tV~dQIrLWe~Er~R~~~~~g 396 (407)
.+| -|..+=..-|+.--+-+|+.|+
T Consensus 113 -------~iPGv~TpsEi~~A~~~G~~~vKlFPA 139 (216)
T d1mxsa_ 113 -------LLPGISTPSEIMMGYALGYRRFKLFPA 139 (216)
T ss_dssp -------EECEECSHHHHHHHHTTTCCEEEETTH
T ss_pred -------ccCCcCCHHHHHHHHHCCCCEEEeccc
Confidence 444 3556666777777777777664
No 9
>d2v9va2 a.4.5.35 (A:438-510) C-terminal fragment of elongation factor SelB {Moorella thermoacetica [TaxId: 1525]}
Probab=29.67 E-value=57 Score=22.50 Aligned_cols=61 Identities=15% Similarity=0.197 Sum_probs=45.0
Q ss_pred hHHHHHHHHHhhhhcCCceEEEEeCHHHHHHHHHcCCCHHHHHHHHhhcCccccccCCCCCChhHHHHHHHHHHhcCcee
Q 015409 313 LHCEILRLFSKVEYQLPNLIVGAITKESLYNAFENGITAEQIISFLQQNAHPRVADRMPSVPENVCDQIRLWESDLNRVE 392 (407)
Q Consensus 313 lqiaiL~lF~~l~~r~Pnlvvg~iTReSvr~Al~~GITA~QII~fL~~hAHp~m~~~~p~lP~tV~dQIrLWe~Er~R~~ 392 (407)
++-++++...+...+.| ++-||+.+.+.+-+. +.+|+.+.+.+--+-.+.++++
T Consensus 6 l~~~i~~~L~~fH~~~P---------------~~~G~~keeLr~~l~-----------~~~~~~~f~~lL~~l~~~g~l~ 59 (73)
T d2v9va2 6 WWQAVTRALEEFHSRYP---------------LRPGLAREELRSRYF-----------SRLPARVYQALLEEWSREGRLQ 59 (73)
T ss_dssp HHHHHHHHHHHHHHHCT---------------TSSCEEHHHHHHHHC-----------TTSCHHHHHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHHHHHHHCc---------------cccCCCHHHHHHHhc-----------ccCCHHHHHHHHHHHHHCCChh
Confidence 34445666666666655 356777777776654 6789999999999999999999
Q ss_pred eeCeeee
Q 015409 393 MTPAHYY 399 (407)
Q Consensus 393 ~~~g~Ly 399 (407)
...+++.
T Consensus 60 ~~g~~v~ 66 (73)
T d2v9va2 60 LAANTVA 66 (73)
T ss_dssp ECSSEEE
T ss_pred eeCCEEE
Confidence 9888775
No 10
>d1wa3a1 c.1.10.1 (A:2-203) KDPG aldolase {Thermotoga maritima [TaxId: 2336]}
Probab=29.58 E-value=35 Score=28.91 Aligned_cols=88 Identities=18% Similarity=0.264 Sum_probs=58.5
Q ss_pred cceEEEeeCceEEEecCCHhHHHHHHHHHhhhhcCCceEEEE---eCHHHHHHHHHcCCC-------HHHHHHHHhhcCc
Q 015409 294 EGFIVVETNFRMYAYSTSKLHCEILRLFSKVEYQLPNLIVGA---ITKESLYNAFENGIT-------AEQIISFLQQNAH 363 (407)
Q Consensus 294 ~g~IIVETNFrvYAYT~S~lqiaiL~lF~~l~~r~Pnlvvg~---iTReSvr~Al~~GIT-------A~QII~fL~~hAH 363 (407)
.|.=++|-.+| +|--...++...+ ...|++.||. +|+|.+++|.+.|-. -.+++++...+-+
T Consensus 33 ~Gi~~iEitlr------~p~a~~~i~~l~~--~~~~~~~vGaGTV~~~~~~~~a~~aGa~fivsP~~~~~v~~~~~~~~i 104 (202)
T d1wa3a1 33 GGVHLIEITFT------VPDADTVIKELSF--LKEKGAIIGAGTVTSVEQCRKAVESGAEFIVSPHLDEEISQFCKEKGV 104 (202)
T ss_dssp TTCCEEEEETT------STTHHHHHHHTHH--HHHTTCEEEEESCCSHHHHHHHHHHTCSEEECSSCCHHHHHHHHHHTC
T ss_pred cCCCEEEEecC------CccHHHHHHHHHH--hcCCCcEEEecccccHHHHHHHHhhcccEEeCCCCcHHHHHHHHhcCC
Confidence 47778888877 3443444443222 2349999997 999999999999843 4678888877766
Q ss_pred cccccCCCCCC--hhHHHHHHHHHHhcCceeeeCe
Q 015409 364 PRVADRMPSVP--ENVCDQIRLWESDLNRVEMTPA 396 (407)
Q Consensus 364 p~m~~~~p~lP--~tV~dQIrLWe~Er~R~~~~~g 396 (407)
| .+| -|..+=.+-|+.=.+-+++.|+
T Consensus 105 ~-------~iPGv~TpsEi~~A~~~G~~~lK~fPa 132 (202)
T d1wa3a1 105 F-------YMPGVMTPTELVKAMKLGHTILKLFPG 132 (202)
T ss_dssp E-------EECEECSHHHHHHHHHTTCCEEEETTH
T ss_pred c-------eeCCcCcHHHHHHHHHCCCCEEEecch
Confidence 4 344 2455555667766666666554
No 11
>d1wbha1 c.1.10.1 (A:1-213) KDPG aldolase {Escherichia coli [TaxId: 562]}
Probab=28.25 E-value=23 Score=30.52 Aligned_cols=87 Identities=21% Similarity=0.381 Sum_probs=60.0
Q ss_pred cceEEEeeCceEEEecCCHhHHHHHHHHHhhhhcCCceEEEE---eCHHHHHHHHHcCC-------CHHHHHHHHhhcCc
Q 015409 294 EGFIVVETNFRMYAYSTSKLHCEILRLFSKVEYQLPNLIVGA---ITKESLYNAFENGI-------TAEQIISFLQQNAH 363 (407)
Q Consensus 294 ~g~IIVETNFrvYAYT~S~lqiaiL~lF~~l~~r~Pnlvvg~---iTReSvr~Al~~GI-------TA~QII~fL~~hAH 363 (407)
.|.=++|-=+| +|-- +..+.++..+||++.+|. +|.|.+++|.+.|. .-..++.+...+-.
T Consensus 39 ~Gi~~iEitl~------tp~a---~~~I~~l~~~~p~~~vGaGTV~~~~~~~~a~~aGa~FivSP~~~~~v~~~a~~~~i 109 (213)
T d1wbha1 39 GGVRVLNVTLR------TECA---VDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAGAQFAISPGLTEPLLKAATEGTI 109 (213)
T ss_dssp TTCCEEEEESC------STTH---HHHHHHHHHHCTTSEEEEESCCSHHHHHHHHHHTCSCEEESSCCHHHHHHHHHSSS
T ss_pred CCCCEEEEeCC------ChhH---HHHHHHHHHHCCCCeeeccccccHHHHHHHHHCCCcEEECCCCCHHHHHHHHhcCC
Confidence 35555665444 3433 444555667899999997 99999999999995 46788888888766
Q ss_pred cccccCCCCCC--hhHHHHHHHHHHhcCceeeeCe
Q 015409 364 PRVADRMPSVP--ENVCDQIRLWESDLNRVEMTPA 396 (407)
Q Consensus 364 p~m~~~~p~lP--~tV~dQIrLWe~Er~R~~~~~g 396 (407)
| .+| -|..+=..-|+.=-+-+|+.|+
T Consensus 110 ~-------~iPGv~TpsEi~~A~~~G~~~vKlFPA 137 (213)
T d1wbha1 110 P-------LIPGISTVSELMLGMDYGLKEFKFFPA 137 (213)
T ss_dssp C-------EEEEESSHHHHHHHHHTTCCEEEETTT
T ss_pred C-------ccCCcCCHHHHHHHHHCCCCEEEeccc
Confidence 4 344 2455556677766667776664
No 12
>d1r7ja_ a.4.5.49 (A:) Sso10a (SSO10449) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=22.87 E-value=13 Score=27.85 Aligned_cols=27 Identities=19% Similarity=0.338 Sum_probs=18.3
Q ss_pred HHHHHh-cCccccCCCCCccchhhhhhhc
Q 015409 169 MKVFQR-GLLSRRDKEAPRLTESGFQFLL 196 (407)
Q Consensus 169 ~~lL~~-~ll~~~~~~~~~IT~~GFqFLL 196 (407)
++-|.. |+.. ..++...||++|..||-
T Consensus 39 l~~L~~~GLI~-~~~~~Y~iT~kG~~~L~ 66 (90)
T d1r7ja_ 39 IKMLMDLEIIR-QEGKQYMLTKKGEELLE 66 (90)
T ss_dssp HHHHHHTTSEE-EETTEEEECHHHHHHHH
T ss_pred HHHHHHCCCee-ecCCEEEECccHHHHHH
Confidence 344544 5554 43566799999999985
No 13
>d1dpua_ a.4.5.16 (A:) C-terminal domain of RPA32 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.71 E-value=35 Score=24.18 Aligned_cols=49 Identities=18% Similarity=0.276 Sum_probs=31.3
Q ss_pred ChhhHHHHHHHHHHHHHHHcCCChHHHHHHHHhhcccccCccccCCCCCHHH-HHHHHHHhhcCcee
Q 015409 198 DTNAQLWYIVREYISNSQERGINQADLISFLLELSFHVAGEAYNLNTLSEIQ-KSMIKDFADLGLVK 263 (407)
Q Consensus 198 d~~~Q~W~lll~yl~~~e~~~~~~~~~l~fLf~Ls~~~~G~~Y~~~~lt~~q-~~~L~~L~d~GLvy 263 (407)
..+.||+.++.. ...+.|+...++..-| .+++..+ +..++.|.+.|+||
T Consensus 6 ~~q~~V~~~i~s---~~~~eGi~~~el~~~l--------------~~~~~~~i~~aid~L~~eG~IY 55 (69)
T d1dpua_ 6 VAQNQVLNLIKA---CPRPEGLNFQDLKNQL--------------KHMSVSSIKQAVDFLSNEGHIY 55 (69)
T ss_dssp HHHHHHHHHHHH---CCCTTTEEHHHHHHHS--------------TTSCHHHHHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHHHh---CCCccCcCHHHHHHHc--------------cCCCHHHHHHHHHHHHhCCcee
Confidence 345566666543 2234577777766521 1355555 77899999999998
No 14
>d1wj5a_ a.4.5.59 (A:) OB fold-containing protein 1, Obfc1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=21.06 E-value=28 Score=27.40 Aligned_cols=38 Identities=16% Similarity=0.254 Sum_probs=25.8
Q ss_pred HHHHHHHHHhhcCceeeecCCCccccccchhhhhhccc
Q 015409 248 IQKSMIKDFADLGLVKLQQGRKENWFIPTKLATNLSMS 285 (407)
Q Consensus 248 ~q~~~L~~L~d~GLvy~~~~~~~~~f~pT~La~~L~~~ 285 (407)
..++.+.-|.|.|+||.+....+.-||.|.=.-.|-++
T Consensus 79 iFKeAi~~Lqe~G~VFqK~~~~D~lYyVT~qDKdLhs~ 116 (120)
T d1wj5a_ 79 VFKNALQLLQEKGLVFQRDSGSDKLYYVTTKDKDLQSG 116 (120)
T ss_dssp HHHHHHHHHHHHTSEECSSCSSSCCBEECSSSCCCCSC
T ss_pred HHHHHHHHHHHCCEEEecCCCccceEEeeccccccccC
Confidence 44677999999999974443456678778754444443
Done!