Query         015410
Match_columns 407
No_of_seqs    259 out of 1366
Neff          6.5 
Searched_HMMs 29240
Date          Mon Mar 25 12:08:15 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015410.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015410hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 2pnq_A [pyruvate dehydrogenase 100.0   6E-42 2.1E-46  355.3  17.2  266   94-387     7-290 (467)
  2 2irm_A Mitogen-activated prote 100.0 3.4E-32 1.2E-36  272.9  17.1  170  155-386    35-236 (358)
  3 2j4o_A Mitogen-activated prote 100.0 3.9E-32 1.3E-36  276.6  13.4  172  156-386    48-250 (401)
  4 2i0o_A Ser/Thr phosphatase; be 100.0 1.6E-30 5.4E-35  254.7  19.8  183  155-403    35-242 (304)
  5 2p8e_A PPM1B beta isoform vari 100.0 1.1E-30 3.7E-35  256.4  18.1  173  155-386    36-211 (307)
  6 1a6q_A Phosphatase 2C; catalyt 100.0 8.9E-30 3.1E-34  257.8  20.9  169  155-387    34-205 (382)
  7 3qn1_B Protein phosphatase 2C  100.0 6.7E-30 2.3E-34  254.3  17.6  181  170-403    61-256 (337)
  8 3kdj_B Protein phosphatase 2C  100.0 2.4E-29 8.2E-34  247.8  20.1  184  155-403    21-227 (316)
  9 3d8k_A PP2C, protein phosphata 100.0 1.1E-29 3.6E-34  256.9  17.6  167  157-403    32-268 (377)
 10 2isn_A NYSGXRC-8828Z, phosphat 100.0 6.3E-29 2.1E-33  250.1  16.6  174  154-403    24-275 (364)
 11 2i44_A Serine-threonine phosph 100.0   4E-28 1.4E-32  239.1  20.7  198  155-403    34-264 (324)
 12 2iq1_A Protein phosphatase 2C  100.0 5.1E-28 1.7E-32  233.4  20.4  179  155-403    20-211 (274)
 13 4da1_A Protein phosphatase 1K,  99.9 6.1E-27 2.1E-31  237.3  20.7  173  154-393   133-307 (389)
 14 2pk0_A Serine/threonine protei  99.9   4E-23 1.4E-27  195.3  18.4  175  155-403    19-195 (250)
 15 2j82_A TPPHA, protein serine-t  99.9 7.6E-23 2.6E-27  192.0  16.4  175  155-403    14-191 (240)
 16 1txo_A Putative bacterial enzy  99.9 2.5E-22 8.4E-27  188.4  13.6  167  155-403    18-186 (237)
 17 2jfr_A Ser-Thr phosphatase MSP  99.8 2.2E-20 7.6E-25  174.7  13.5  159  155-403    19-184 (234)
 18 3rnr_A Stage II sporulation E   99.8 2.3E-20 7.8E-25  173.3  12.3  151  170-403     9-163 (211)
 19 3t91_A Stage II sporulation pr  98.4 1.2E-06 4.2E-11   81.7  10.6  109  155-341    21-131 (242)
 20 3pu9_A Protein serine/threonin  98.3 2.2E-05 7.6E-10   73.6  16.9  112  155-344    24-137 (242)
 21 3f79_A Probable two-component   97.6  0.0013 4.5E-08   61.5  15.6  118  156-344    50-170 (255)
 22 3zt9_A Serine phosphatase; hyd  95.9    0.23 7.9E-06   44.3  15.1   31  292-322    80-112 (193)
 23 3ke6_A Protein RV1364C/MT1410;  89.7       3  0.0001   41.4  12.3   32  291-322   117-150 (399)

No 1  
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A
Probab=100.00  E-value=6e-42  Score=355.26  Aligned_cols=266  Identities=20%  Similarity=0.163  Sum_probs=193.9

Q ss_pred             CCCChhhcccccccccccccccCCC--CCCCCCccccccccccCCCCcccCcccccceeecCCCCCCceEEEEecCCCCe
Q 015410           94 PTLSRLDMLSSSLQSSLSNLSCSPS--SPSDLPEYDTCVSKLMIAPCRSEGILNGMEVQVAGGAAGEDRVQAVCSEEHGL  171 (407)
Q Consensus        94 p~ls~~~v~~~l~~~e~s~~~~~~~--~~~~~~~~d~~~l~s~n~P~~~~~~~~~~~~q~a~g~~~EDR~~a~~~~~~g~  171 (407)
                      ..|||.+|+.+|+++|+|+.+....  .++.+.+|++++.+. +.++                   ||++.+......++
T Consensus         7 ~~l~~~~~~~~l~~~e~s~~~~~~~g~~~~~v~~~~s~~g~~-R~~n-------------------ED~~~v~~~~~~~~   66 (467)
T 2pnq_A            7 FYLTPPQVNSILKANEYSFKVPEFDGKNVSSILGFDSNRLPA-NAPI-------------------EDRRSATTCLQTRG   66 (467)
T ss_dssp             --CCHHHHHHHHHHHCEEEECCCCTTTCCCSEEEEEEEEECC-SSSC-------------------CEEEEEEEESSSSC
T ss_pred             ccCCHHHHHHHHhccCeeEEecCCCCCcccceEEEEeeccCC-CCCC-------------------CCceeeeeccCCCc
Confidence            4599999999999999996553221  245699999998877 6666                   99987654333344


Q ss_pred             EEEEEEcCCCChHHHHHHHHHHHHHHHHhhh--hhhhh----hccccCCCCCCcccCCccchhh--hhhhhhhhhhHHhh
Q 015410          172 LFCAIYDGFNGRDAADFLAGTLYESVMFYSN--LFEWE----SKIDATRAPDDSEFGGHLQYIF--EDERKDSAANSFAN  243 (407)
Q Consensus       172 lffGVFDGHgG~~aA~~ls~~L~~~I~~~l~--~l~~~----~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~  243 (407)
                      .||||||||||+.||+|++++|+.+|...+.  ..+.+    .+...+..+.++++++..++..  ....|..++..||+
T Consensus        67 ~lfgVfDGHGG~~aa~~as~~L~~~i~~~l~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~~~~~~~~~  146 (467)
T 2pnq_A           67 MLLGVFDGHAGCACSQAVSERLFYYIAVSLLPHETLLEIENAVESGRALLPILQWHKHPNDYFSKEASKLYFNGLRTYWQ  146 (467)
T ss_dssp             EEEEEEEEESSSHHHHHHHHHHHHHHHHHHCCHHHHHHHHTTTC----CCCCEEECCCTTCCCCSTTHHHHHHHHHHHHH
T ss_pred             EEEEEECCCCCHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhccccccccccccccccccchhhhhhhhhcchhhhhh
Confidence            5689999999999999999999999987641  11111    1111222344455554443321  12346667777786


Q ss_pred             hcCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh------hccCCCCCCCCceEEEEEEeCCeEEEEEeCCceEE
Q 015410          244 ASLHPEREISSSFQHAVLDSLQRALNQAENDFLHMVEQE------MEDRPDLVSVGSCVLLVLLHGNDLYTLNLGDSRAV  317 (407)
Q Consensus       244 ~~~~~~~~~~~~~~~~v~~aL~~AF~~lD~di~~~~~~~------~~~~~~~a~sGSTAlvalI~~~~L~VANvGDSRAV  317 (407)
                      ++......  .....++.++|++||.++|++|...+...      ....++...|||||++++|.+++||||||||||||
T Consensus       147 ~~~~~~~~--~~~~~~~~~aL~~af~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~GtTa~v~li~~~~l~vAnvGDSRa~  224 (467)
T 2pnq_A          147 ELIDLNTG--ESADIDVKEALINAFKRLDNDISLEAQVGDPNSFLNYLVLRVAFSGATACVAHVDGVDLHVANTGDSRAM  224 (467)
T ss_dssp             HHHHC--------CCCHHHHHHHHHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHSEECEEEEEEETTEEEEEEESSCEEE
T ss_pred             hhcccccc--ccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccccccccCCCCcceEEEEEEECCEEEEEECCCceEE
Confidence            54311000  00011578999999999999998765421      00122356799999999999999999999999999


Q ss_pred             EEecCCcccccCCCceeEEecCCCCCCCCHHHHHHHHhcCCCC--CCceecCcccCcccccccccCCccccc
Q 015410          318 LATYDEVNDLSGHKRLKAIQLTESHTVENEDERTRLLSEHPDD--PMPILAGKVKGKLKVTRAFGVGYLKKV  387 (407)
Q Consensus       318 L~~~~~~~~~~~~g~~~a~~LT~DH~~~n~~E~~RI~~~hP~~--~~vi~~gRV~G~LavTRAfGD~~lK~~  387 (407)
                      |++..      ++|.|++++||.||++.++.|++||+++||..  +.++..+||.|.|++||||||..|||+
T Consensus       225 l~r~~------~~g~~~~~~LT~DH~~~~~~E~~Ri~~~g~~~~~~~~~~~~Rv~G~l~vtRAlGd~~~K~~  290 (467)
T 2pnq_A          225 LGVQE------EDGSWSAVTLSNDHNAQNERELQRLKLEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWS  290 (467)
T ss_dssp             EEEEC------TTSCEEEEECCCCCSTTCHHHHHHHHHTSCGGGHHHHBSSSSBTTTBSSSBCEECGGGTSC
T ss_pred             EEEec------CCCcEEEEECCCCCCCCCHHHHHHHHHcCCCcccceeEecCccccccccchhcCchhhccc
Confidence            99986      57899999999999999999999999999864  367788999999999999999999973


No 2  
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae}
Probab=99.98  E-value=3.4e-32  Score=272.86  Aligned_cols=170  Identities=23%  Similarity=0.319  Sum_probs=136.7

Q ss_pred             CCCCceEEEEecCCCCeEEEEEEcCCCChHHHHHHHHHHHHHHHH-hhhhhhhhhccccCCCCCCcccCCccchhhhhhh
Q 015410          155 AAGEDRVQAVCSEEHGLLFCAIYDGFNGRDAADFLAGTLYESVMF-YSNLFEWESKIDATRAPDDSEFGGHLQYIFEDER  233 (407)
Q Consensus       155 ~~~EDR~~a~~~~~~g~lffGVFDGHgG~~aA~~ls~~L~~~I~~-~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (407)
                      ..|||++.+.. ...++.||||||||||+.+|++++++|+.+|.. .+..                              
T Consensus        35 ~~nED~~~~~~-~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~l~~------------------------------   83 (358)
T 2irm_A           35 YESRDKKCLCI-SDNNTSLYAILSGHNGVTVAENALQEMAAELLLGQLNV------------------------------   83 (358)
T ss_dssp             SSCCEEEEEEE-CSSSEEEEEEEEEESCSHHHHHHHHHHHHHSSSSTTTT------------------------------
T ss_pred             CCCCceEEEEE-CCCCEEEEEEEcCCCCHHHHHHHHHHHHHHHHHhhhcc------------------------------
Confidence            35899987654 445677899999999999999999999988764 2210                              


Q ss_pred             hhhhhhHHhhhcCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-------cCC-------------------
Q 015410          234 KDSAANSFANASLHPEREISSSFQHAVLDSLQRALNQAENDFLHMVEQEME-------DRP-------------------  287 (407)
Q Consensus       234 ~~~~l~~~~~~~~~~~~~~~~~~~~~v~~aL~~AF~~lD~di~~~~~~~~~-------~~~-------------------  287 (407)
                                          .....++.++|++||.++|++|+....+.+.       ..+                   
T Consensus        84 --------------------~~~~~~~~~~l~~a~~~~d~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  143 (358)
T 2irm_A           84 --------------------CNTDEAVKELIRQSFMSVEKGYFDSINPHVATKTAIQLHLSADGMNQYEISQQFENVLQK  143 (358)
T ss_dssp             --------------------CCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHTTC---------------CCCT
T ss_pred             --------------------ccchhhHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccccccccchhhccchhhh
Confidence                                0012367899999999999999875332110       000                   


Q ss_pred             -----CCCCCCceEEEEEEeCCeEEEEEeCCceEEEEecCCcccccCCCceeEEecCCCCCCCCHHHHHHHHhcCCCCCC
Q 015410          288 -----DLVSVGSCVLLVLLHGNDLYTLNLGDSRAVLATYDEVNDLSGHKRLKAIQLTESHTVENEDERTRLLSEHPDDPM  362 (407)
Q Consensus       288 -----~~a~sGSTAlvalI~~~~L~VANvGDSRAVL~~~~~~~~~~~~g~~~a~~LT~DH~~~n~~E~~RI~~~hP~~~~  362 (407)
                           ....+||||++++|.+++|||||||||||||++..      .+|.|++++||.||++.++.|++||.+.+    .
T Consensus       144 ~~~~~~~~~~GtTav~~li~~~~l~vAnvGDSRa~l~r~~------~~g~~~~~~LT~DH~~~~~~E~~Ri~~~G----g  213 (358)
T 2irm_A          144 LDSLNNALSVGSSAVLALIHRSHLYLGNIGNCRALLCKTD------EHDTLTVTQLSVDHNLLNAEEAARLFRLG----L  213 (358)
T ss_dssp             HHHHHTTTTCEEEEEEEEEESSEEEEEEESSCEEEEEECC------TTCSCEEEECSCCCBTTSHHHHHHHHTTT----C
T ss_pred             cccccCCCCCCCcEEEEEEECCEEEEEEcccCeEEEEEec------CCCceeeEeCCCCCCCCCHHHHHHHHHcC----C
Confidence                 23469999999999999999999999999999986      56789999999999999999999999995    4


Q ss_pred             ceecCcccCcccccccccCCcccc
Q 015410          363 PILAGKVKGKLKVTRAFGVGYLKK  386 (407)
Q Consensus       363 vi~~gRV~G~LavTRAfGD~~lK~  386 (407)
                      .+..+|+.|.| +||||||..+|+
T Consensus       214 ~v~~~r~~g~l-lTRalGd~~~K~  236 (358)
T 2irm_A          214 MAQNFEGVPLY-STRCIGNYLGKA  236 (358)
T ss_dssp             CGGGGTTCTTC-BSBCEECHHHHT
T ss_pred             eEeccCcCCEE-cccCCcCHHHhc
Confidence            56678999988 999999999884


No 3  
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A
Probab=99.97  E-value=3.9e-32  Score=276.62  Aligned_cols=172  Identities=26%  Similarity=0.356  Sum_probs=134.9

Q ss_pred             CCCceEEEEecCCCCeEEEEEEcCCCChHHHHHHHHHHHHHHHHh-hhhhhhhhccccCCCCCCcccCCccchhhhhhhh
Q 015410          156 AGEDRVQAVCSEEHGLLFCAIYDGFNGRDAADFLAGTLYESVMFY-SNLFEWESKIDATRAPDDSEFGGHLQYIFEDERK  234 (407)
Q Consensus       156 ~~EDR~~a~~~~~~g~lffGVFDGHgG~~aA~~ls~~L~~~I~~~-l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (407)
                      .|||++.+.. ...++.||||||||||+.+|+|++++|+.+|... +.                                
T Consensus        48 ~nED~~~~~~-~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~~~--------------------------------   94 (401)
T 2j4o_A           48 PPEDSWLKFR-SENNCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLN--------------------------------   94 (401)
T ss_dssp             CCCEEEEEEE-ETTTEEEEEEEEEESSSHHHHHHHHHHHHTTSSSSCC--------------------------------
T ss_pred             CCCceEEEec-CCCCeEEEEEEcCCCCHHHHHHHHHHHHHHHHHhhhh--------------------------------
Confidence            5899987654 3456778999999999999999999998777532 10                                


Q ss_pred             hhhhhHHhhhcCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-------cCC--------------------
Q 015410          235 DSAANSFANASLHPEREISSSFQHAVLDSLQRALNQAENDFLHMVEQEME-------DRP--------------------  287 (407)
Q Consensus       235 ~~~l~~~~~~~~~~~~~~~~~~~~~v~~aL~~AF~~lD~di~~~~~~~~~-------~~~--------------------  287 (407)
                                        ......++.++|++||.++|++|...++..+.       ..+                    
T Consensus        95 ------------------~~~~~~~~~~~l~~af~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  156 (401)
T 2j4o_A           95 ------------------AEHAEADVRRVLLQAFDVVERSFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLK  156 (401)
T ss_dssp             ------------------TTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTCCSSCSCGGGHHHHHHHH
T ss_pred             ------------------cccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccccccccccchhhhhhh
Confidence                              00013367889999999999998775432210       000                    


Q ss_pred             ---CCCCCCceEEEEEEeCCeEEEEEeCCceEEEEecCCcccccCCCceeEEecCCCCCCCCHHHHHHHHhcCCCCCCce
Q 015410          288 ---DLVSVGSCVLLVLLHGNDLYTLNLGDSRAVLATYDEVNDLSGHKRLKAIQLTESHTVENEDERTRLLSEHPDDPMPI  364 (407)
Q Consensus       288 ---~~a~sGSTAlvalI~~~~L~VANvGDSRAVL~~~~~~~~~~~~g~~~a~~LT~DH~~~n~~E~~RI~~~hP~~~~vi  364 (407)
                         ....+||||++++|.+++|||||||||||||++.+      .+| |++++||.||++.++.|++||.+.|+.. ..+
T Consensus       157 ~~~~~~~~GtTa~~~li~~~~l~vanvGDSRa~l~r~~------~~g-~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v-~~~  228 (401)
T 2j4o_A          157 TLEREISGGAMAVVAVLLNNKLYVANVGTNRALLCKST------VDG-LQVTQLNVDHTTENEDELFRLSQLGLDA-GKI  228 (401)
T ss_dssp             HHHHHHCCEEEEEEEEEETTEEEEEEESSCEEEEEEEC------SSS-EEEEECSCCCSTTSHHHHHHHHTTTCCH-HHH
T ss_pred             cccccCCCccCEEEEEEECCEEEEEEccCceEEEEEcC------CCC-ceEEECCCCCCCCCHHHHHHHHHcCCCe-eec
Confidence               12468999999999999999999999999999987      455 8999999999999999999999997421 112


Q ss_pred             ecCcccCcccccccccCCcccc
Q 015410          365 LAGKVKGKLKVTRAFGVGYLKK  386 (407)
Q Consensus       365 ~~gRV~G~LavTRAfGD~~lK~  386 (407)
                      ...|+.|.|++||||||..+|+
T Consensus       229 ~~~r~~g~l~vtRalGd~~~k~  250 (401)
T 2j4o_A          229 KQVGIICGQESTRRIGDYKVKY  250 (401)
T ss_dssp             HHHCCBTTBCCSBCEECHHHHH
T ss_pred             cCccccCCcccccccCCHhhcc
Confidence            3569999999999999999884


No 4  
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae}
Probab=99.97  E-value=1.6e-30  Score=254.72  Aligned_cols=183  Identities=25%  Similarity=0.325  Sum_probs=142.3

Q ss_pred             CCCCceEEEEecCCCCeEEEEEEcCCCChHHHHHHHHHHHHHHHHhhhhhhhhhccccCCCCCCcccCCccchhhhhhhh
Q 015410          155 AAGEDRVQAVCSEEHGLLFCAIYDGFNGRDAADFLAGTLYESVMFYSNLFEWESKIDATRAPDDSEFGGHLQYIFEDERK  234 (407)
Q Consensus       155 ~~~EDR~~a~~~~~~g~lffGVFDGHgG~~aA~~ls~~L~~~I~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (407)
                      ..|||++.+......++.||||||||||+.+|++++++|+.+|......                               
T Consensus        35 ~~nED~~~~~~~~~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~-------------------------------   83 (304)
T 2i0o_A           35 ISQEDAHNCILNFDDQCSFFAVYDGHGGAEVAQYCSLHLPTFLKTVEAY-------------------------------   83 (304)
T ss_dssp             SCCCEEEEEEEEEETTEEEEEEEECSSCSHHHHHHHHHHHHHHHHSHHH-------------------------------
T ss_pred             CCccCEEEEEeccCCCeEEEEEEcCCCCHHHHHHHHHHHHHHHHhhhhc-------------------------------
Confidence            4679998766533346678999999999999999999999988764310                               


Q ss_pred             hhhhhHHhhhcCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHH-h---hc------cCCCCCCCCceEEEEEEeCC
Q 015410          235 DSAANSFANASLHPEREISSSFQHAVLDSLQRALNQAENDFLHMVEQ-E---ME------DRPDLVSVGSCVLLVLLHGN  304 (407)
Q Consensus       235 ~~~l~~~~~~~~~~~~~~~~~~~~~v~~aL~~AF~~lD~di~~~~~~-~---~~------~~~~~a~sGSTAlvalI~~~  304 (407)
                                           ...++.++|++||.++|+.|...... +   +.      .......+|||++++++.++
T Consensus        84 ---------------------~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~  142 (304)
T 2i0o_A           84 ---------------------GRKEFEKALKEAFLGFDATLLQEKVIEELKVLSGDSAGSDAEPGKDSGCTAVVALLHGK  142 (304)
T ss_dssp             ---------------------HTTCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHCC-----CCTTTSCEEEEEEEEEETT
T ss_pred             ---------------------ccccHHHHHHHHHHHHHHHHHhhhhHHHHhhhccccccccccCCCCCCccEEEEEEECC
Confidence                                 01145788999999999988754311 0   11      11124679999999999999


Q ss_pred             eEEEEEeCCceEEEEecCCcccccCCCceeEEecCCCCCCCCHHHHHHHHhcCCCCCCceecCcccCcccccccccCCcc
Q 015410          305 DLYTLNLGDSRAVLATYDEVNDLSGHKRLKAIQLTESHTVENEDERTRLLSEHPDDPMPILAGKVKGKLKVTRAFGVGYL  384 (407)
Q Consensus       305 ~L~VANvGDSRAVL~~~~~~~~~~~~g~~~a~~LT~DH~~~n~~E~~RI~~~hP~~~~vi~~gRV~G~LavTRAfGD~~l  384 (407)
                      +|||||||||||||++.+           ++++||.||++.++.|+.||..++   +.+...+|+.|.|++||||||..+
T Consensus       143 ~l~vanvGDSRa~l~r~g-----------~~~~LT~DH~~~~~~e~~rI~~~g---g~v~~~~rv~g~l~ltRalGd~~~  208 (304)
T 2i0o_A          143 DLYVANAGDSRCVVCRNG-----------KALEMSFDHKPEDTVEYQRIEKAG---GRVTLDGRVNGGLNLSRAIGDHGY  208 (304)
T ss_dssp             EEEEEEESSCEEEEEETT-----------EEEECCCCCCTTSHHHHHHHHHTT---CCBCTTSCBTTSCSCSBCEECGGG
T ss_pred             EEEEEEccCcEEEEEECC-----------EEEEcCCCcCCcCHHHHHHHHhCC---CEEEeCCeEcCceeccccccCHHH
Confidence            999999999999999988           999999999999999999999985   233337899999999999999998


Q ss_pred             cc--------------ccceecccCCCcE-EEEe
Q 015410          385 KK--------------VHIQYCALTSDFF-ISLV  403 (407)
Q Consensus       385 K~--------------~~l~~~~l~~~~~-i~l~  403 (407)
                      |+              |.+....+..++. |+|+
T Consensus       209 k~~~~l~~~~~~v~~~pdi~~~~l~~~D~fllL~  242 (304)
T 2i0o_A          209 KMNKSLPAEEQMISALPDIEKITVGPEDEFMVLA  242 (304)
T ss_dssp             CCCTTSCGGGSSSBCCCEEEEEECCTTEEEEEEE
T ss_pred             ccCccCCccCCeEEeeCeEEEEEcCCCCeEEEEE
Confidence            85              3345556666654 4543


No 5  
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens}
Probab=99.97  E-value=1.1e-30  Score=256.37  Aligned_cols=173  Identities=24%  Similarity=0.312  Sum_probs=133.8

Q ss_pred             CCCCceEEEEecCC---CCeEEEEEEcCCCChHHHHHHHHHHHHHHHHhhhhhhhhhccccCCCCCCcccCCccchhhhh
Q 015410          155 AAGEDRVQAVCSEE---HGLLFCAIYDGFNGRDAADFLAGTLYESVMFYSNLFEWESKIDATRAPDDSEFGGHLQYIFED  231 (407)
Q Consensus       155 ~~~EDR~~a~~~~~---~g~lffGVFDGHgG~~aA~~ls~~L~~~I~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (407)
                      ..|||++.+.....   .++.||||||||||+.+|++++++++.+|..... +    ....        ..         
T Consensus        36 ~~nED~~~~~~~~~~~~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~-~----~~~~--------~~---------   93 (307)
T 2p8e_A           36 VEMEDAHTAVVGIPHGLEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNED-F----RAAG--------KS---------   93 (307)
T ss_dssp             SSCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSTT-T----C----------------------
T ss_pred             CcccceEEEEecCCCCCCCeEEEEEECCCCCHHHHHHHHHHHHHHHHhhHh-h----hhcc--------cc---------
Confidence            46799987765322   3567899999999999999999999999875311 0    0000        00         


Q ss_pred             hhhhhhhhHHhhhcCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCceEEEEEEeCCeEEEEEe
Q 015410          232 ERKDSAANSFANASLHPEREISSSFQHAVLDSLQRALNQAENDFLHMVEQEMEDRPDLVSVGSCVLLVLLHGNDLYTLNL  311 (407)
Q Consensus       232 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~v~~aL~~AF~~lD~di~~~~~~~~~~~~~~a~sGSTAlvalI~~~~L~VANv  311 (407)
                               .+         ........+.++|++||.++|+.|....+.    .+....+|||+++++|.++++|||||
T Consensus        94 ---------~~---------~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~----~~~~~~~GtT~~~~~i~~~~l~vanv  151 (307)
T 2p8e_A           94 ---------GS---------ALELSVENVKNGIRTGFLKIDEYMRNFSDL----RNGMDRSGSTAVGVMISPKHIYFINC  151 (307)
T ss_dssp             ------------------------CHHHHHHHHHHHHHHHHHHHHTSTTT----C---CCCEECEEEEEECSSEEEEEEE
T ss_pred             ---------cc---------cccccHHHHHHHHHHHHHHHHHHHHhhhhh----ccCCCCCCCeEEEEEEECCcEEEEEc
Confidence                     00         001113467899999999999998653221    23345689999999999999999999


Q ss_pred             CCceEEEEecCCcccccCCCceeEEecCCCCCCCCHHHHHHHHhcCCCCCCceecCcccCcccccccccCCcccc
Q 015410          312 GDSRAVLATYDEVNDLSGHKRLKAIQLTESHTVENEDERTRLLSEHPDDPMPILAGKVKGKLKVTRAFGVGYLKK  386 (407)
Q Consensus       312 GDSRAVL~~~~~~~~~~~~g~~~a~~LT~DH~~~n~~E~~RI~~~hP~~~~vi~~gRV~G~LavTRAfGD~~lK~  386 (407)
                      |||||||++.+           ++++||+||++.++.|+.||..++    ..+..+|+.|.|++||||||..+|+
T Consensus       152 GDSRa~l~r~g-----------~~~~lT~DH~~~~~~E~~rI~~~g----g~v~~~rv~g~l~ltRalGd~~~k~  211 (307)
T 2p8e_A          152 GDSRAVLYRNG-----------QVCFSTQDHKPCNPREKERIQNAG----GSVMIQRVNGSLAVSRALGDYDYKC  211 (307)
T ss_dssp             SSCEEEEEETT-----------EEEEECCCCCTTSHHHHHHHHHTT----CCEETTEETTTBSCSBCEECGGGSC
T ss_pred             cCcEEEEEECC-----------ccccCCCCCCCCCHHHHHHHHHcC----CEEEeCcccCeEeccccccCHHHhc
Confidence            99999999988           899999999999999999999984    4566789999999999999999985


No 6  
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A
Probab=99.97  E-value=8.9e-30  Score=257.80  Aligned_cols=169  Identities=25%  Similarity=0.331  Sum_probs=137.7

Q ss_pred             CCCCceEEEEecCC---CCeEEEEEEcCCCChHHHHHHHHHHHHHHHHhhhhhhhhhccccCCCCCCcccCCccchhhhh
Q 015410          155 AAGEDRVQAVCSEE---HGLLFCAIYDGFNGRDAADFLAGTLYESVMFYSNLFEWESKIDATRAPDDSEFGGHLQYIFED  231 (407)
Q Consensus       155 ~~~EDR~~a~~~~~---~g~lffGVFDGHgG~~aA~~ls~~L~~~I~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (407)
                      ..|||++.+.....   .++.||||||||||+.+|++++++++..|..... + +   ...                   
T Consensus        34 ~~nEDa~~~~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~~-~-~---~~~-------------------   89 (382)
T 1a6q_A           34 VEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQD-F-K---GSA-------------------   89 (382)
T ss_dssp             SSCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHH-H-H---CSS-------------------
T ss_pred             CCCCceeEEecCCCCCCCCeEEEEEEcCCCcHHHHHHHHHHHHHHHHhhhh-h-h---ccC-------------------
Confidence            46799988765322   3577899999999999999999999998875311 0 0   000                   


Q ss_pred             hhhhhhhhHHhhhcCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCceEEEEEEeCCeEEEEEe
Q 015410          232 ERKDSAANSFANASLHPEREISSSFQHAVLDSLQRALNQAENDFLHMVEQEMEDRPDLVSVGSCVLLVLLHGNDLYTLNL  311 (407)
Q Consensus       232 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~v~~aL~~AF~~lD~di~~~~~~~~~~~~~~a~sGSTAlvalI~~~~L~VANv  311 (407)
                                           .......+.++|++||.++|+.|....+.    .+....+|||+++++|.++++|||||
T Consensus        90 ---------------------~~~~~~~~~~~l~~af~~~n~~i~~~~~~----~~~~~~~GtT~~~~li~~~~l~vanv  144 (382)
T 1a6q_A           90 ---------------------GAPSVENVKNGIRTGFLEIDEHMRVMSEK----KHGADRSGSTAVGVLISPQHTYFINC  144 (382)
T ss_dssp             ---------------------SSCCHHHHHHHHHHHHHHHHHHHHHHHHH----TTCCCCCEECEEEEEECSSEEEEEEE
T ss_pred             ---------------------CCCCHHHHHHHHHHHHHHHHHHHHhhhhh----ccCCCCCcceEEEEEEECCeEEEEEc
Confidence                                 00012367899999999999999876543    33455699999999999999999999


Q ss_pred             CCceEEEEecCCcccccCCCceeEEecCCCCCCCCHHHHHHHHhcCCCCCCceecCcccCcccccccccCCccccc
Q 015410          312 GDSRAVLATYDEVNDLSGHKRLKAIQLTESHTVENEDERTRLLSEHPDDPMPILAGKVKGKLKVTRAFGVGYLKKV  387 (407)
Q Consensus       312 GDSRAVL~~~~~~~~~~~~g~~~a~~LT~DH~~~n~~E~~RI~~~hP~~~~vi~~gRV~G~LavTRAfGD~~lK~~  387 (407)
                      |||||||++.+           ++++||.||++.++.|++||..++    +.+..+|+.|.|++||||||..+|+.
T Consensus       145 GDSRayl~r~g-----------~~~~LT~DHs~~~~~E~~RI~~~g----g~v~~~Rv~g~l~ltRalGd~~~K~~  205 (382)
T 1a6q_A          145 GDSRGLLCRNR-----------KVHFFTQDHKPSNPLEKERIQNAG----GSVMIQRVNGSLAVSRALGDFDYKCV  205 (382)
T ss_dssp             SSCEEEEEETT-----------EEEEECCCCCTTSHHHHHHHHHTT----CCEETTEETTTBSCSBCEECGGGSCC
T ss_pred             CCCeEEEEECC-----------ceEEeCCCCCCCCHHHHHHHHhcC----cEEecccccCceeeeeecCcHhhccc
Confidence            99999999998           899999999999999999999984    56777899999999999999999853


No 7  
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B*
Probab=99.97  E-value=6.7e-30  Score=254.26  Aligned_cols=181  Identities=22%  Similarity=0.260  Sum_probs=137.8

Q ss_pred             CeEEEEEEcCCCChHHHHHHHHHHHHHHHHhhhhhhhhhccccCCCCCCcccCCccchhhhhhhhhhhhhHHhhhcCCCc
Q 015410          170 GLLFCAIYDGFNGRDAADFLAGTLYESVMFYSNLFEWESKIDATRAPDDSEFGGHLQYIFEDERKDSAANSFANASLHPE  249 (407)
Q Consensus       170 g~lffGVFDGHgG~~aA~~ls~~L~~~I~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  249 (407)
                      .+.||||||||||++++++++++++..|...+...........                                     
T Consensus        61 ~~~l~~V~DGhGG~~~~~~as~~~~~~l~~~~~~~~~~~~~~~-------------------------------------  103 (337)
T 3qn1_B           61 TGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRN-------------------------------------  103 (337)
T ss_dssp             EEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHTC--------------------------------------------
T ss_pred             CeEEEEEEeCCCChhHHHHHHHHHHHHHHHHHHhhhhhhhccc-------------------------------------
Confidence            4678999999999999999999999999988753211100000                                     


Q ss_pred             cccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhh-------ccCCCCCCCCceEEEEEEeCCeEEEEEeCCceEEEEecC
Q 015410          250 REISSSFQHAVLDSLQRALNQAENDFLHMVEQEM-------EDRPDLVSVGSCVLLVLLHGNDLYTLNLGDSRAVLATYD  322 (407)
Q Consensus       250 ~~~~~~~~~~v~~aL~~AF~~lD~di~~~~~~~~-------~~~~~~a~sGSTAlvalI~~~~L~VANvGDSRAVL~~~~  322 (407)
                        ........+.++|+++|.++|.++.....+..       ...+....+|||++++++.+++|||||||||||||++.+
T Consensus       104 --~~~~~~~~~~~~l~~a~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~~anvGDSR~~l~r~g  181 (337)
T 3qn1_B          104 --TGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGK  181 (337)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHTSSCBCCTTCSSCBCCCSSCTTCEECEEEEEECSSEEEEEEESSCEEEEEETT
T ss_pred             --cccchHHHHHHHHHHHHHHhhHHHHhhhhccccccccccccccccCCCCceEEEEEEECCEEEEEeccCcEEEEEeCC
Confidence              00111246889999999999999875431110       122334679999999999999999999999999999988


Q ss_pred             CcccccCCCceeEEecCCCCCCCCHHHHHHHHhcCCCCCCcee--cCcccCcccccccccCCcccc-----ccceeccc-
Q 015410          323 EVNDLSGHKRLKAIQLTESHTVENEDERTRLLSEHPDDPMPIL--AGKVKGKLKVTRAFGVGYLKK-----VHIQYCAL-  394 (407)
Q Consensus       323 ~~~~~~~~g~~~a~~LT~DH~~~n~~E~~RI~~~hP~~~~vi~--~gRV~G~LavTRAfGD~~lK~-----~~l~~~~l-  394 (407)
                                 ++++||.||++.++.|+.||..+++   .+..  .+|+.|.|++||||||..+|.     +.+...++ 
T Consensus       182 -----------~~~~lT~DH~~~~~~e~~ri~~~gg---~v~~~~~~r~~g~l~~sRalGd~~~~~~v~~~pdv~~~~~~  247 (337)
T 3qn1_B          182 -----------EAMPLSVDHKPDREDEYARIENAGG---KVIQWQGARVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRS  247 (337)
T ss_dssp             -----------EEEESCCCCCTTSHHHHHHHHHTTC---CEEESSSEEETTTBSCSBCEECGGGTTTSBCCCEEEEEECC
T ss_pred             -----------EeeeecCCCCCCCHHHHHHHHHcCC---eEEecCCceecCccccccccccccccCCCCCcceEEEEEeC
Confidence                       8999999999999999999999963   3332  469999999999999999986     34445555 


Q ss_pred             CCCcEEEEe
Q 015410          395 TSDFFISLV  403 (407)
Q Consensus       395 ~~~~~i~l~  403 (407)
                      ..+++|+|+
T Consensus       248 ~~~d~llL~  256 (337)
T 3qn1_B          248 REDECLILA  256 (337)
T ss_dssp             TTEEEEEEE
T ss_pred             CCCCEEEEE
Confidence            456677764


No 8  
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B*
Probab=99.96  E-value=2.4e-29  Score=247.78  Aligned_cols=184  Identities=21%  Similarity=0.281  Sum_probs=142.6

Q ss_pred             CCCCceEEEEec---------------CCCCeEEEEEEcCCCChHHHHHHHHHHHHHHHHhhhhhhhhhccccCCCCCCc
Q 015410          155 AAGEDRVQAVCS---------------EEHGLLFCAIYDGFNGRDAADFLAGTLYESVMFYSNLFEWESKIDATRAPDDS  219 (407)
Q Consensus       155 ~~~EDR~~a~~~---------------~~~g~lffGVFDGHgG~~aA~~ls~~L~~~I~~~l~~l~~~~~~~~~~~~~~~  219 (407)
                      ..|||++.+...               ...++.||||||||||+.++++++++++..|...+........          
T Consensus        21 ~~nEDa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~GG~~~~~~as~~~~~~l~~~~~~~~~~~~----------   90 (316)
T 3kdj_B           21 PEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLS----------   90 (316)
T ss_dssp             SSCCEEEEEETTCC-----------CCGGGGCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHCCCGG----------
T ss_pred             CCCccceeeecccccccccccccccccCCCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHHHHhhhcccc----------
Confidence            357999877432               1135667999999999999999999999999987752210000          


Q ss_pred             ccCCccchhhhhhhhhhhhhHHhhhcCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCceEEEE
Q 015410          220 EFGGHLQYIFEDERKDSAANSFANASLHPEREISSSFQHAVLDSLQRALNQAENDFLHMVEQEMEDRPDLVSVGSCVLLV  299 (407)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~v~~aL~~AF~~lD~di~~~~~~~~~~~~~~a~sGSTAlva  299 (407)
                                                      ........+.++|+++|.++|.++..         .....+|||++++
T Consensus        91 --------------------------------~~~~~~~~~~~~l~~a~~~~~~~~~~---------~~~~~~GtT~~~~  129 (316)
T 3kdj_B           91 --------------------------------DGDTWLEKWKKALFNSFLRVDSEIES---------VAPETVGSTSVVA  129 (316)
T ss_dssp             --------------------------------GTHHHHHHHHHHHHHHHHHHHHHGGG---------TSCTTCEECEEEE
T ss_pred             --------------------------------cccchHHHHHHHHHHHHHHHHHHHhc---------ccCCCCCCcEEEE
Confidence                                            00122346889999999999988732         1234689999999


Q ss_pred             EEeCCeEEEEEeCCceEEEEecCCcccccCCCceeEEecCCCCCCCCHHHHHHHHhcCCCCCCce--ecCcccCcccccc
Q 015410          300 LLHGNDLYTLNLGDSRAVLATYDEVNDLSGHKRLKAIQLTESHTVENEDERTRLLSEHPDDPMPI--LAGKVKGKLKVTR  377 (407)
Q Consensus       300 lI~~~~L~VANvGDSRAVL~~~~~~~~~~~~g~~~a~~LT~DH~~~n~~E~~RI~~~hP~~~~vi--~~gRV~G~LavTR  377 (407)
                      ++.+++|||||+|||||||++.+           ++++||.||++.++.|+.||..++.   .+.  .++|+.|.|++||
T Consensus       130 ~i~~~~l~vanvGDSR~yl~r~g-----------~~~~lT~DH~~~~~~e~~ri~~~~g---~v~~~~~~r~~g~l~~sR  195 (316)
T 3kdj_B          130 VVFPSHIFVANCGDSRAVLCRGK-----------TALPLSVDHKPDREDEAARIEAAGG---KVIQWNGARVFGVLAMSR  195 (316)
T ss_dssp             EECSSEEEEEEESSCEEEEEETT-----------EEEESCCCCCTTSHHHHHHHHHTTC---CEEESSSEEETTTBSCSB
T ss_pred             EEECCEEEEEEccCCEEEEEECC-----------EecccCCCCCCCCHHHHHHHHHcCC---eEEecCCceEcceecccc
Confidence            99999999999999999999988           8999999999999999999999962   333  2569999999999


Q ss_pred             cccCCccccc-----cceecc-cCCCcEEEEe
Q 015410          378 AFGVGYLKKV-----HIQYCA-LTSDFFISLV  403 (407)
Q Consensus       378 AfGD~~lK~~-----~l~~~~-l~~~~~i~l~  403 (407)
                      ||||..+|..     .+...+ +..+++|+|+
T Consensus       196 alGd~~~~~~~~~~pdv~~~~~~~~~d~llL~  227 (316)
T 3kdj_B          196 SIGDRYLKPSIIPDPEVTAVKRVKEDDCLILA  227 (316)
T ss_dssp             CEECGGGTTTSBCCCEEEEEECCTTEEEEEEE
T ss_pred             ccCccccCCCcCCCCceEEEEecCCCCEEEEE
Confidence            9999999853     223333 6677777775


No 9  
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii}
Probab=99.96  E-value=1.1e-29  Score=256.86  Aligned_cols=167  Identities=24%  Similarity=0.302  Sum_probs=132.7

Q ss_pred             CCceEEEEec--CCCCeEEEEEEcCCCChHHHHHHHHHHHHHHHHhhhhhhhhhccccCCCCCCcccCCccchhhhhhhh
Q 015410          157 GEDRVQAVCS--EEHGLLFCAIYDGFNGRDAADFLAGTLYESVMFYSNLFEWESKIDATRAPDDSEFGGHLQYIFEDERK  234 (407)
Q Consensus       157 ~EDR~~a~~~--~~~g~lffGVFDGHgG~~aA~~ls~~L~~~I~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (407)
                      +||++.+...  ...++.||||||||||+.+|++++++|+.+|.....                                
T Consensus        32 neD~~~~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~~--------------------------------   79 (377)
T 3d8k_A           32 SDDVVVVEGMLRGRPETRVHAMFDGFQGRHSAMWLAQNVMNYLNDLRD--------------------------------   79 (377)
T ss_dssp             -CEEEEEEEECSSCTTEEEEEEEEBSSSSHHHHHHHHHHHHHHTTCSS--------------------------------
T ss_pred             hcceEEEecccCCCCCeEEEEEEcCCCcHHHHHHHHHHHHHHHHHhcc--------------------------------
Confidence            4777655432  356778899999999999999999999988753210                                


Q ss_pred             hhhhhHHhhhcCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCceEEEEEEe------------
Q 015410          235 DSAANSFANASLHPEREISSSFQHAVLDSLQRALNQAENDFLHMVEQEMEDRPDLVSVGSCVLLVLLH------------  302 (407)
Q Consensus       235 ~~~l~~~~~~~~~~~~~~~~~~~~~v~~aL~~AF~~lD~di~~~~~~~~~~~~~~a~sGSTAlvalI~------------  302 (407)
                                              ...++|++||.++|++|....          ..+|||++++++.            
T Consensus        80 ------------------------~~~~al~~af~~~d~~l~~~~----------~~~GtTa~~~~i~~~~~~~~~~~~g  125 (377)
T 3d8k_A           80 ------------------------VNEEEITRQFERMDGDLRAAN----------LPGGSSALIIFVRYEKKPTEARVVG  125 (377)
T ss_dssp             ------------------------SSHHHHHHHHHHHHHHHHHHT----------CCCCBCEEEEEEEEESSCCCEEEET
T ss_pred             ------------------------cHHHHHHHHHHHHHHHHHhcc----------cCCCCceEEEEEecccccccccccc
Confidence                                    125689999999999997641          2479999998885            


Q ss_pred             ---------------------------------------CCeEEEEEeCCceEEEEecCCcccccCCCceeEEecCCCCC
Q 015410          303 ---------------------------------------GNDLYTLNLGDSRAVLATYDEVNDLSGHKRLKAIQLTESHT  343 (407)
Q Consensus       303 ---------------------------------------~~~L~VANvGDSRAVL~~~~~~~~~~~~g~~~a~~LT~DH~  343 (407)
                                                             +++|||||||||||||++.+           ++++||.||+
T Consensus       126 ~~~~p~~~~~~~~~~~~~g~ta~a~vali~~~~p~~~~~~~~l~vanvGDSRa~l~r~g-----------~~~~LT~DH~  194 (377)
T 3d8k_A          126 RQIVPEGAKEFTSVAEALGGPLMPVVAMNFRRDPRAAKGIYTIHVASLGNSRCVLKSGR-----------TAIHLSTPHT  194 (377)
T ss_dssp             TEEECCC---CCCHHHHSSCCCCCCEEECGGGCGGGTTCEEEEEEEEESSCEEEEEETT-----------EEEESSCCCS
T ss_pred             ccccccccccccccccccccccccceeeecccccccccCCCeEEEEEcccceEEEEECC-----------EEEECCcCCC
Confidence                                                   14899999999999999988           9999999999


Q ss_pred             CCCHHHHHHHHhcCCCCCCce-ecC--cccCcccccccccCCcccc--------------ccceecccCCCcEEEEe
Q 015410          344 VENEDERTRLLSEHPDDPMPI-LAG--KVKGKLKVTRAFGVGYLKK--------------VHIQYCALTSDFFISLV  403 (407)
Q Consensus       344 ~~n~~E~~RI~~~hP~~~~vi-~~g--RV~G~LavTRAfGD~~lK~--------------~~l~~~~l~~~~~i~l~  403 (407)
                      +.++.|+.||.++++   .+. .++  ||.|.|++||||||..+|+              |.+....+..+++|+|+
T Consensus       195 ~~~~~E~~RI~~~gg---~v~~~~g~~rv~G~l~vtRalGd~~~k~~~~~~~~~~~v~~~Pdv~~~~l~~~D~llL~  268 (377)
T 3d8k_A          195 ASSHKERHRVQAAGG---VFTTVNGELLLGGVVPMTRAFGSFDFKKGGQGKLQQDLVSAVPDVTTFFAYPGDDIVAG  268 (377)
T ss_dssp             SSSHHHHHHHHTTTC---CEEECSSSEEETTTBSCSBCSSCGGGSCC---CCSSCSSBCCCEEEEEEECTTCEEEEE
T ss_pred             CCCHHHHHHHHHcCC---EEEecCCcEEEcCceecceeecChhhhcccccccccCccccCCcEEEEEcCCCCEEEEE
Confidence            999999999999863   333 145  9999999999999999984              44566667777776664


No 10 
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii}
Probab=99.96  E-value=6.3e-29  Score=250.06  Aligned_cols=174  Identities=20%  Similarity=0.275  Sum_probs=134.0

Q ss_pred             CCCCCceEEEEec--CCCCeEEEEEEcCCCChHHHHHHHHHHHHHHHHhhhhhhhhhccccCCCCCCcccCCccchhhhh
Q 015410          154 GAAGEDRVQAVCS--EEHGLLFCAIYDGFNGRDAADFLAGTLYESVMFYSNLFEWESKIDATRAPDDSEFGGHLQYIFED  231 (407)
Q Consensus       154 g~~~EDR~~a~~~--~~~g~lffGVFDGHgG~~aA~~ls~~L~~~I~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (407)
                      ...|||++.+...  ...++.||||||||||..||+|++++|+.++.....                             
T Consensus        24 R~~nED~~~v~~~~~~~~~~~lf~VfDGHGG~~as~~a~~~l~~~l~~~~~-----------------------------   74 (364)
T 2isn_A           24 RPTDEDAILVSAPATSRPNVRIKAVFDGHAGEATSQYCAKHAAKHLGKLSE-----------------------------   74 (364)
T ss_dssp             SSSCCEEEEEECC----CCEEEEEEEEEESCSHHHHHHHHHHHHHHTTCSS-----------------------------
T ss_pred             CCcCCCeeEEeccCCCCCCeEEEEEEECCCCHHHHHHHHHHHHHHHHHhhc-----------------------------
Confidence            3568999876532  245677899999999999999999999987753110                             


Q ss_pred             hhhhhhhhHHhhhcCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCceEEEEEEeC--------
Q 015410          232 ERKDSAANSFANASLHPEREISSSFQHAVLDSLQRALNQAENDFLHMVEQEMEDRPDLVSVGSCVLLVLLHG--------  303 (407)
Q Consensus       232 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~v~~aL~~AF~~lD~di~~~~~~~~~~~~~~a~sGSTAlvalI~~--------  303 (407)
                                              +   ..++|++||.++|++|......       ...+|||++++++.+        
T Consensus        75 ------------------------~---~~~~l~~a~~~~d~~i~~~~~~-------~~~~GtT~v~~~i~~~~~p~~~~  120 (364)
T 2isn_A           75 ------------------------F---TFAEVKKACLSLDAEIIRKLGP-------KHVAGSTGIIVAIERLSAPVVEN  120 (364)
T ss_dssp             ------------------------C---CHHHHHHHHHHHHHHHHHHHCS-------SSCCEECEEEEEEEECSSCEEEE
T ss_pred             ------------------------c---cHHHHHHHHHHHHHHHHHhccc-------CCCCCcceehhhhhccccccccc
Confidence                                    0   1356889999999998765321       146899999999852        


Q ss_pred             ----------------------------------------------------CeEEEEEeCCceEEEEecCCcccccCCC
Q 015410          304 ----------------------------------------------------NDLYTLNLGDSRAVLATYDEVNDLSGHK  331 (407)
Q Consensus       304 ----------------------------------------------------~~L~VANvGDSRAVL~~~~~~~~~~~~g  331 (407)
                                                                          .+|||||||||||||+++++        
T Consensus       121 ~~g~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~vanvGDSRayl~~r~g--------  192 (364)
T 2isn_A          121 VVGREIVPRAHEETFVPLEKLIQEEEEAEHPELVGRYPRVPDVQQKTIPAGSFLVTAINIGDSRATLIHSDG--------  192 (364)
T ss_dssp             EETTEECCC-----CCCHHHHHHHHHHC-----CCSSCCCCCCEEEEECTTCEEEEEEEESSCEEEEECTTS--------
T ss_pred             cccccccccccccchhhhhhhhhhhhhcccccccccccccccccccccccCccEEEEEECccCEEEEEeeCC--------
Confidence                                                                38999999999999995432        


Q ss_pred             ceeEEecCCCCCCCCHHHHHHHHhcCCCCCCceec--CcccCcccccccccCCcccc--------------ccceecccC
Q 015410          332 RLKAIQLTESHTVENEDERTRLLSEHPDDPMPILA--GKVKGKLKVTRAFGVGYLKK--------------VHIQYCALT  395 (407)
Q Consensus       332 ~~~a~~LT~DH~~~n~~E~~RI~~~hP~~~~vi~~--gRV~G~LavTRAfGD~~lK~--------------~~l~~~~l~  395 (407)
                        ++++||.||++.++.|+.||.++++   .+...  .||.|.|++||||||..+|+              |.+....+.
T Consensus       193 --~~~~LT~DH~~~~~~e~~rI~~~gG---~v~~~~~~rv~g~l~ltRalGd~~~k~~~~l~~~~~~v~~~Pdv~~~~l~  267 (364)
T 2isn_A          193 --GLTRLSKDHKPNHPTEASRIEKAGG---SVETFDVPRVDGVLALSRAFGDSDFKMNPNLPPEEQKVIAVPDVRQFYAL  267 (364)
T ss_dssp             --CEEECCCCCCTTSHHHHHHHHHTTC---CEEESSSEEETTTBSCSBCEECGGGSCCCSSCGGGSSSBCCCEEEEEEEC
T ss_pred             --EEEEcCcCCCCCCHHHHHHHHHcCC---eEecCCCcccCCceeeEEEecchhhccccccCcccCceEEEeEEEEEECC
Confidence              7999999999999999999999852   23322  38899999999999999984              345556677


Q ss_pred             CCcEEEEe
Q 015410          396 SDFFISLV  403 (407)
Q Consensus       396 ~~~~i~l~  403 (407)
                      .+++|+|+
T Consensus       268 ~~D~llL~  275 (364)
T 2isn_A          268 SSDLLLLA  275 (364)
T ss_dssp             TTCEEEEE
T ss_pred             CCCEEEEE
Confidence            77777764


No 11 
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii}
Probab=99.96  E-value=4e-28  Score=239.13  Aligned_cols=198  Identities=16%  Similarity=0.186  Sum_probs=139.2

Q ss_pred             CCCCceEEEEec---CCCCeEEEEEEcCCCChHHHHHHHHHHHHHHHHh--hhhhhhhhccccCCCCCCcccCCccchhh
Q 015410          155 AAGEDRVQAVCS---EEHGLLFCAIYDGFNGRDAADFLAGTLYESVMFY--SNLFEWESKIDATRAPDDSEFGGHLQYIF  229 (407)
Q Consensus       155 ~~~EDR~~a~~~---~~~g~lffGVFDGHgG~~aA~~ls~~L~~~I~~~--l~~l~~~~~~~~~~~~~~~~~~~~~~~~~  229 (407)
                      ..|||++.+...   ...+..||||||||||+.++++++++++.+|...  +......+...                  
T Consensus        34 ~~nED~~~~~~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~~~~~~~~~~~~l~~~------------------   95 (324)
T 2i44_A           34 KHQEDRFTLCPQLVPGRDDCAFFGVFDGTVGDFASENVKDLVVPQLISSPAWQEVTEMLRSD------------------   95 (324)
T ss_dssp             SSCCEEEEEESCCSTTCSSEEEEEEEEEESSSHHHHHHHHHHHHHHHTCHHHHHHHHHHTSC------------------
T ss_pred             CccCCeEEEEecCCCCCCCeEEEEEeCCCCchHHHHHHHHHHHHHHHhhhHHHHHHHHhhcc------------------
Confidence            457999877643   2356778999999999999999999999999764  22110000000                  


Q ss_pred             hhhhhhhhhhHHhhhcCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCceEEEEEEeCCeEEEE
Q 015410          230 EDERKDSAANSFANASLHPEREISSSFQHAVLDSLQRALNQAENDFLHMVEQEMEDRPDLVSVGSCVLLVLLHGNDLYTL  309 (407)
Q Consensus       230 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~v~~aL~~AF~~lD~di~~~~~~~~~~~~~~a~sGSTAlvalI~~~~L~VA  309 (407)
                                      ... .+.......++.++|++||.++|++|.....+.   ..  ..+|+|++++++.+++||||
T Consensus        96 ----------------~~~-~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~---~~--~~~g~gtt~~~i~~~~l~va  153 (324)
T 2i44_A           96 ----------------VPA-TEVDEKLPQLLDQAVDDMYKNADNELVKMCEQL---NK--DYASSTSVTAVLAKGFVAVG  153 (324)
T ss_dssp             ----------------CCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---TC--SSCEECEEEEEEETTEEEEE
T ss_pred             ----------------CCc-cccccccchhHHHHHHHHHHHHHHHHHHHHhhc---CC--CCCCCCeEEEEEECCeEEEE
Confidence                            000 000000124678999999999999998776541   12  23455555566999999999


Q ss_pred             EeCCceEEEEecCCcccccCCCceeEEecCCCCCCCCHHHHHHHHhcCCCCCCce--------ecCcccCcccccccccC
Q 015410          310 NLGDSRAVLATYDEVNDLSGHKRLKAIQLTESHTVENEDERTRLLSEHPDDPMPI--------LAGKVKGKLKVTRAFGV  381 (407)
Q Consensus       310 NvGDSRAVL~~~~~~~~~~~~g~~~a~~LT~DH~~~n~~E~~RI~~~hP~~~~vi--------~~gRV~G~LavTRAfGD  381 (407)
                      |||||||||++.+      ++| |++++||.||++.++.|++||++.++    .+        ...++.|.|++||||||
T Consensus       154 nvGDSRa~l~r~~------~~g-~~~~~LT~DH~~~~~~E~~Ri~~~Gg----~v~~~~~~~~~~~~~~g~l~~sra~Gd  222 (324)
T 2i44_A          154 HLGDSRIAMGVET------PNG-LNCEFLTVDHKPDMPHEKLRIMRNGG----SVEYLHNHNNKPFIRGGDFSFRKSRGE  222 (324)
T ss_dssp             EESSCEEEEEEEE------TTE-EEEEESCCCCCTTSHHHHHHHHHTTC----EEECCTTCTTSCEEECTTHHHHHHTTC
T ss_pred             EccCceEEEEecc------CCC-ceEEECCCCCCCcCHHHHHHHHHcCC----EEEecccccCCCccccCcccchhhcCC
Confidence            9999999999985      222 57999999999999999999999863    22        12267899999999999


Q ss_pred             ----Cccc---------------cccceecccCCCc-EEEEe
Q 015410          382 ----GYLK---------------KVHIQYCALTSDF-FISLV  403 (407)
Q Consensus       382 ----~~lK---------------~~~l~~~~l~~~~-~i~l~  403 (407)
                          ..||               .|.+....+..++ ||+|+
T Consensus       223 ~p~~~~~~~~~g~~~~~~~~v~~~pdv~~~~l~~~d~~llLa  264 (324)
T 2i44_A          223 QPMQLQYSRAFGGKDLKMYGLSNQPDVRVVRVTPQHRVMILA  264 (324)
T ss_dssp             CCCCBSSSBCEECGGGTTTTCBCCCEEEEEECCTTEEEEEEE
T ss_pred             ccccceeccccCCccccCCeEeecCEEEEEEcCCCCeEEEEE
Confidence                5554               2345566677776 66664


No 12 
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens}
Probab=99.96  E-value=5.1e-28  Score=233.43  Aligned_cols=179  Identities=27%  Similarity=0.363  Sum_probs=138.3

Q ss_pred             CCCCceEEEEecCCCCeEEEEEEcCCCChHHHHHHHHHHHHHHHHhhhhhhhhhccccCCCCCCcccCCccchhhhhhhh
Q 015410          155 AAGEDRVQAVCSEEHGLLFCAIYDGFNGRDAADFLAGTLYESVMFYSNLFEWESKIDATRAPDDSEFGGHLQYIFEDERK  234 (407)
Q Consensus       155 ~~~EDR~~a~~~~~~g~lffGVFDGHgG~~aA~~ls~~L~~~I~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (407)
                      ..|||++.+... ..+..||+|||||||+.+|+++++.+..+|...+..                               
T Consensus        20 ~~nED~~~~~~~-~~~~~l~~V~DG~GG~~~a~~as~~~~~~l~~~~~~-------------------------------   67 (274)
T 2iq1_A           20 KENEDRFDFAQL-TDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPK-------------------------------   67 (274)
T ss_dssp             SSCCEEEEEEEC-SSSEEEEEEEEEESSTHHHHHHHHHHHHHHHHHTTT-------------------------------
T ss_pred             CCccceEEEeeC-CCCeEEEEEECCCCCHHHHHHHHHHHHHHHHHHhcc-------------------------------
Confidence            467999876543 345677999999999999999999999888765420                               


Q ss_pred             hhhhhHHhhhcCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCceEEEEEEeC-CeEEEEEeCC
Q 015410          235 DSAANSFANASLHPEREISSSFQHAVLDSLQRALNQAENDFLHMVEQEMEDRPDLVSVGSCVLLVLLHG-NDLYTLNLGD  313 (407)
Q Consensus       235 ~~~l~~~~~~~~~~~~~~~~~~~~~v~~aL~~AF~~lD~di~~~~~~~~~~~~~~a~sGSTAlvalI~~-~~L~VANvGD  313 (407)
                                            ..++.++|++||.++|+.+.......  .......+|||++++++.+ .++|+||+||
T Consensus        68 ----------------------~~~~~~~l~~a~~~~~~~i~~~~~~~--~~~~~~~~GtT~~~~~i~~~~~l~~anvGD  123 (274)
T 2iq1_A           68 ----------------------EKNLETLLTLAFLEIDKAFSSHARLS--ADATLLTSGTTATVALLRDGIELVVASVGD  123 (274)
T ss_dssp             ----------------------CCCHHHHHHHHHHHHHHHHHHHHHC-----CCGGGCEECEEEEEEETTTEEEEEEESS
T ss_pred             ----------------------cccHHHHHHHHHHHHHHHHHHHhhhc--cccCCCCCCCcEEEEEEECCCEEEEEEecC
Confidence                                  01357789999999999998764321  1123467899999999985 6999999999


Q ss_pred             ceEEEEecCCcccccCCCceeEEecCCCCCCCCHHHHHHHHhcCCCCCCceec----CcccCcccccccccCCccccc--
Q 015410          314 SRAVLATYDEVNDLSGHKRLKAIQLTESHTVENEDERTRLLSEHPDDPMPILA----GKVKGKLKVTRAFGVGYLKKV--  387 (407)
Q Consensus       314 SRAVL~~~~~~~~~~~~g~~~a~~LT~DH~~~n~~E~~RI~~~hP~~~~vi~~----gRV~G~LavTRAfGD~~lK~~--  387 (407)
                      |||||++.+           ++++||.||++.++.|+.||++.++   .+..+    .|+.|.+++||||||..+|..  
T Consensus       124 SR~~l~r~g-----------~~~~lT~DH~~~~~~E~~Ri~~~gG---~v~~~~~~~~~~~~~~~ltralGd~~~k~~~v  189 (274)
T 2iq1_A          124 SRAILCRKG-----------KPMKLTIDHTPERKDEKERIKKCGG---FVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGV  189 (274)
T ss_dssp             CEEEEEETT-----------EEEECCCCCCTTSHHHHHHHHHTTC---CEEECTTSCEEETTTBSCSBCEECGGGTTTTC
T ss_pred             ceEEEEeCC-----------EeeECCCCCCCcCHHHHHHHHHcCC---EEEcCCCCceeECCeEeeccccCChhhccCCE
Confidence            999999988           8999999999999999999999852   33322    378899999999999999864  


Q ss_pred             ----cceecccCCC--cEEEEe
Q 015410          388 ----HIQYCALTSD--FFISLV  403 (407)
Q Consensus       388 ----~l~~~~l~~~--~~i~l~  403 (407)
                          .+....+..+  .||+|.
T Consensus       190 ~~~pdi~~~~l~~g~d~~lll~  211 (274)
T 2iq1_A          190 IAEPETKRIKLHHADDSFLVLT  211 (274)
T ss_dssp             BCCCEEEEEECCTTTEEEEEEE
T ss_pred             EeCCEEEEEEeCCCCCcEEEEE
Confidence                3444455543  455553


No 13 
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A
Probab=99.95  E-value=6.1e-27  Score=237.33  Aligned_cols=173  Identities=26%  Similarity=0.321  Sum_probs=136.2

Q ss_pred             CCCCCceEEEEecCCCCeEEEEEEcCCCChHHHHHHHHHHHHHHHHhhhhhhhhhccccCCCCCCcccCCccchhhhhhh
Q 015410          154 GAAGEDRVQAVCSEEHGLLFCAIYDGFNGRDAADFLAGTLYESVMFYSNLFEWESKIDATRAPDDSEFGGHLQYIFEDER  233 (407)
Q Consensus       154 g~~~EDR~~a~~~~~~g~lffGVFDGHgG~~aA~~ls~~L~~~I~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (407)
                      ...|||++.+... ..++.||||||||||+.+++++++.+...|...+..                              
T Consensus       133 R~~NED~~~~~~~-~~~~~l~~VaDG~GG~~~g~~as~~~~~~l~~~~~~------------------------------  181 (389)
T 4da1_A          133 RKENEDRFDFAQL-TDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPK------------------------------  181 (389)
T ss_dssp             SSSCCEEEEEEEC-SSSEEEEEEEEEESSTHHHHHHHHHHHHHHHHHTTT------------------------------
T ss_pred             CCCCcceeeeeec-CCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHhcc------------------------------
Confidence            3457999876543 345667999999999999999999999988776531                              


Q ss_pred             hhhhhhHHhhhcCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCceEEEEEEeCC-eEEEEEeC
Q 015410          234 KDSAANSFANASLHPEREISSSFQHAVLDSLQRALNQAENDFLHMVEQEMEDRPDLVSVGSCVLLVLLHGN-DLYTLNLG  312 (407)
Q Consensus       234 ~~~~l~~~~~~~~~~~~~~~~~~~~~v~~aL~~AF~~lD~di~~~~~~~~~~~~~~a~sGSTAlvalI~~~-~L~VANvG  312 (407)
                                             ...+.++|++||.++++.+.......  .......+|||++++++.++ +|||||||
T Consensus       182 -----------------------~~~~~~~l~~a~~~~n~~i~~~~~~~--~~~~~~~~GtT~~~~li~~~~~l~vanvG  236 (389)
T 4da1_A          182 -----------------------EKNLETLLTLAFLEIDKAFSSHARLS--ADATLLTSGTTATVALLRDGIELVVASVG  236 (389)
T ss_dssp             -----------------------CCCHHHHHHHHHHHHHHHHHHHHHHS--SCGGGGGCEECEEEEEEETTTEEEEEEES
T ss_pred             -----------------------ccCHHHHHHHHHHHHHHHHHHHhhhc--cccccCCCCCeEEEEEEEcCCeEEEEEee
Confidence                                   01356789999999999998765431  12224568999999999865 99999999


Q ss_pred             CceEEEEecCCcccccCCCceeEEecCCCCCCCCHHHHHHHHhcCCCC-CCceecCcccCcccccccccCCcccccccee
Q 015410          313 DSRAVLATYDEVNDLSGHKRLKAIQLTESHTVENEDERTRLLSEHPDD-PMPILAGKVKGKLKVTRAFGVGYLKKVHIQY  391 (407)
Q Consensus       313 DSRAVL~~~~~~~~~~~~g~~~a~~LT~DH~~~n~~E~~RI~~~hP~~-~~vi~~gRV~G~LavTRAfGD~~lK~~~l~~  391 (407)
                      ||||||++.+           ++++||.||++.++.|++||++.++.. .......|+.|.+++||||||..+|.+.+..
T Consensus       237 DSRayl~r~g-----------~~~~LT~DHs~~~~~E~~Ri~~~gG~v~~~~~~~~~~~g~l~ltRalGd~~~k~~~v~~  305 (389)
T 4da1_A          237 DSRAILCRKG-----------KPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIA  305 (389)
T ss_dssp             SCEEEEEETT-----------EEEECCCCCCTTSHHHHHHHHHHTCCEECC---CCEETTTBSCSBCEECGGGGGGTCBC
T ss_pred             ccEEEEEECC-----------EeEEeCCCCCCCCHHHHHHHHHcCCeEecccCCCccCCCeEeeEeeeCChhhccCCCCC
Confidence            9999999988           899999999999999999999986310 0111245899999999999999999875544


Q ss_pred             cc
Q 015410          392 CA  393 (407)
Q Consensus       392 ~~  393 (407)
                      .|
T Consensus       306 ~p  307 (389)
T 4da1_A          306 EP  307 (389)
T ss_dssp             CC
T ss_pred             CC
Confidence            33


No 14 
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae}
Probab=99.90  E-value=4e-23  Score=195.25  Aligned_cols=175  Identities=14%  Similarity=0.149  Sum_probs=132.7

Q ss_pred             CCCCceEEEEecCCCCeEEEEEEcCCCChHHHHHHHHHHHHHHHHhhhhhhhhhccccCCCCCCcccCCccchhhhhhhh
Q 015410          155 AAGEDRVQAVCSEEHGLLFCAIYDGFNGRDAADFLAGTLYESVMFYSNLFEWESKIDATRAPDDSEFGGHLQYIFEDERK  234 (407)
Q Consensus       155 ~~~EDR~~a~~~~~~g~lffGVFDGHgG~~aA~~ls~~L~~~I~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (407)
                      ..|||++.+.... .+..+|+|||||||+.+++++++.+...+...+...      .                       
T Consensus        19 ~~neD~~~~~~~~-~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~------~-----------------------   68 (250)
T 2pk0_A           19 SNNQDFINQFENK-AGVPLIILADGMGGHRAGNIASEMTVTDLGSDWAET------D-----------------------   68 (250)
T ss_dssp             SCCCEEEEEEECT-TCCEEEEEEEEECTTTHHHHHHHHHHHHHHHHHTTC------C-----------------------
T ss_pred             CcCCCceEeccCC-CCcEEEEEEeCCCCcHHHHHHHHHHHHHHHHHHhhc------c-----------------------
Confidence            4579998776654 345679999999999999999999999887433100      0                       


Q ss_pred             hhhhhHHhhhcCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCceEEEEEEeCCeEEEEEeCCc
Q 015410          235 DSAANSFANASLHPEREISSSFQHAVLDSLQRALNQAENDFLHMVEQEMEDRPDLVSVGSCVLLVLLHGNDLYTLNLGDS  314 (407)
Q Consensus       235 ~~~l~~~~~~~~~~~~~~~~~~~~~v~~aL~~AF~~lD~di~~~~~~~~~~~~~~a~sGSTAlvalI~~~~L~VANvGDS  314 (407)
                                         ......+.++|+++|.++++.+......    .+ ...+|||++++++.+++||+||+|||
T Consensus        69 -------------------~~~~~~~~~~l~~~~~~~~~~l~~~~~~----~~-~~~~gtT~~~~~i~~~~l~~anvGDs  124 (250)
T 2pk0_A           69 -------------------FSELSEIRDWMLVSIETENRKIYELGQS----DD-YKGMGTTIEAVAIVGDNIIFAHVGDS  124 (250)
T ss_dssp             -------------------CCSHHHHHHHHHHHHHHHHHHHHHHHHH----TT-CTTCEECEEEEEEETTEEEEEEESSC
T ss_pred             -------------------cCChhhHHHHHHHHHHHHHHHHHHHHhh----CC-CCCCcceEEEEEEECCeEEEEEeCCC
Confidence                               0002356789999999999999876544    22 45689999999999999999999999


Q ss_pred             eEEEEecCCcccccCCCceeEEecCCCCCCCCHHHHHHHHhcCCCCCCceecC--cccCcccccccccCCccccccceec
Q 015410          315 RAVLATYDEVNDLSGHKRLKAIQLTESHTVENEDERTRLLSEHPDDPMPILAG--KVKGKLKVTRAFGVGYLKKVHIQYC  392 (407)
Q Consensus       315 RAVL~~~~~~~~~~~~g~~~a~~LT~DH~~~n~~E~~RI~~~hP~~~~vi~~g--RV~G~LavTRAfGD~~lK~~~l~~~  392 (407)
                      |+||++.+           ++++||.||++.++.+     +.+    .+...+  +..+.+.+||+|||...-.+.+...
T Consensus       125 r~~l~r~g-----------~~~~lt~dh~~~~~~~-----~~g----~i~~~~~~~~~~~~~ltralG~~~~~~p~~~~~  184 (250)
T 2pk0_A          125 RIGIVRQG-----------EYHLLTSDHSLVNELV-----KAG----QLTEEEAASHPQKNIITQSIGQANPVEPDLGVH  184 (250)
T ss_dssp             EEEEEETT-----------EEEECCCCCBHHHHHH-----HTT----SSCHHHHHTCCSCCCBSCCBSCSSCCCCEEEEE
T ss_pred             eEEEEcCC-----------cEEEeCCCCCHHHHHH-----HcC----CCCHHHHHhCCCcceEEeecCCCCCccceEEEE
Confidence            99999987           8999999999976533     221    111110  2335688999999988778888888


Q ss_pred             ccCCCcEEEEe
Q 015410          393 ALTSDFFISLV  403 (407)
Q Consensus       393 ~l~~~~~i~l~  403 (407)
                      ++.++++|+|.
T Consensus       185 ~l~~gd~lll~  195 (250)
T 2pk0_A          185 LLEEGDYLVVN  195 (250)
T ss_dssp             ECCTTCEEEEE
T ss_pred             EcCCCCEEEEE
Confidence            99988876664


No 15 
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A
Probab=99.89  E-value=7.6e-23  Score=191.99  Aligned_cols=175  Identities=19%  Similarity=0.263  Sum_probs=124.1

Q ss_pred             CCCCceEEEEecCCCCeEEEEEEcCCCChHHHHHHHHHHHHHHHHhhhhhhhhhccccCCCCCCcccCCccchhhhhhhh
Q 015410          155 AAGEDRVQAVCSEEHGLLFCAIYDGFNGRDAADFLAGTLYESVMFYSNLFEWESKIDATRAPDDSEFGGHLQYIFEDERK  234 (407)
Q Consensus       155 ~~~EDR~~a~~~~~~g~lffGVFDGHgG~~aA~~ls~~L~~~I~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (407)
                      ..|||++ +... ..+. +|+|||||||+.+++++++.+...+...+....                             
T Consensus        14 ~~neD~~-~~~~-~~~~-~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~-----------------------------   61 (240)
T 2j82_A           14 KSNQDAF-YIDE-KHQR-FFIVADGMGGHAGGEEASRLAVDHIRQYLETHL-----------------------------   61 (240)
T ss_dssp             SSCCEEE-EECT-TTCC-EEEEEEBC---CHHHHHHHHHHHHHHHHHHHHH-----------------------------
T ss_pred             CcCCCcc-EecC-CCCe-EEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcc-----------------------------
Confidence            4579999 5443 3555 799999999999999999999888876543110                             


Q ss_pred             hhhhhHHhhhcCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCceEEEEEEe--CCeEEEEEeC
Q 015410          235 DSAANSFANASLHPEREISSSFQHAVLDSLQRALNQAENDFLHMVEQEMEDRPDLVSVGSCVLLVLLH--GNDLYTLNLG  312 (407)
Q Consensus       235 ~~~l~~~~~~~~~~~~~~~~~~~~~v~~aL~~AF~~lD~di~~~~~~~~~~~~~~a~sGSTAlvalI~--~~~L~VANvG  312 (407)
                                         ..+...+.++|.++|.+++..+.....+    .+....+|||+++++++  +++||+||+|
T Consensus        62 -------------------~~~~~~~~~~l~~~~~~~~~~l~~~~~~----~~~~~~~gtT~~~~~i~~~~~~l~~anvG  118 (240)
T 2j82_A           62 -------------------EDLQHDPVTLLRQAFLAANHAIVEQQRQ----NSARADMGTTAVVILLDEKGDRAWCAHVG  118 (240)
T ss_dssp             -------------------HHHTTSHHHHHHHHHHHHHHHHHHHHTT----SCSCTTCCBCEEEEEECTTSSEEEEEEES
T ss_pred             -------------------cccchhHHHHHHHHHHHHHHHHHHHhhc----ccCCCCCCceEEEEEEEecCCEEEEEEEc
Confidence                               0001245788999999999999875432    33455689999999999  9999999999


Q ss_pred             CceEEEEecCCcccccCCCceeEEecCCCCCCCCHHHHH-HHHhcCCCCCCceecCcccCcccccccccCCcccccccee
Q 015410          313 DSRAVLATYDEVNDLSGHKRLKAIQLTESHTVENEDERT-RLLSEHPDDPMPILAGKVKGKLKVTRAFGVGYLKKVHIQY  391 (407)
Q Consensus       313 DSRAVL~~~~~~~~~~~~g~~~a~~LT~DH~~~n~~E~~-RI~~~hP~~~~vi~~gRV~G~LavTRAfGD~~lK~~~l~~  391 (407)
                      |||+||++.+           ++++||.||++.++.+.. +|..+   +.     .+..+.+.+||+|||...-.+.+..
T Consensus       119 Dsr~~l~r~~-----------~~~~lt~dh~~~~~~~~~g~i~~~---~~-----~~~~~~~~ltralG~~~~~~p~~~~  179 (240)
T 2j82_A          119 DSRIYRWRKD-----------QLQQITSDHTWIAQAVQLGSLTIE---QA-----RQHPWRHVLSQCLGREDLSQIDIQP  179 (240)
T ss_dssp             SCEEEEEETT-----------EEEECSCCCBHHHHC------------------------CCCBSCCBSCTTCCCCEEEE
T ss_pred             cCceEEEeCC-----------EEEEECCCCcHHHHHHHcCCCCHH---HH-----hcCCCcCeEeecCCCCCceeEEEEE
Confidence            9999999987           899999999997653322 22211   11     1234567899999998777788888


Q ss_pred             cccCCCcEEEEe
Q 015410          392 CALTSDFFISLV  403 (407)
Q Consensus       392 ~~l~~~~~i~l~  403 (407)
                      .++.+++.|+|.
T Consensus       180 ~~l~~gd~lll~  191 (240)
T 2j82_A          180 IDLEPGDRLLLC  191 (240)
T ss_dssp             EECCTTCEEEEE
T ss_pred             EeeCCCCEEEEE
Confidence            889988886653


No 16 
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A
Probab=99.88  E-value=2.5e-22  Score=188.39  Aligned_cols=167  Identities=22%  Similarity=0.272  Sum_probs=122.4

Q ss_pred             CCCCceEEEEecCCCCeEEEEEEcCCCChHHHHHHHHHHHHHHHHhhhhhhhhhccccCCCCCCcccCCccchhhhhhhh
Q 015410          155 AAGEDRVQAVCSEEHGLLFCAIYDGFNGRDAADFLAGTLYESVMFYSNLFEWESKIDATRAPDDSEFGGHLQYIFEDERK  234 (407)
Q Consensus       155 ~~~EDR~~a~~~~~~g~lffGVFDGHgG~~aA~~ls~~L~~~I~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (407)
                      ..|||++.+      +..||+|||||||+.+++++++.+.+.+...+..       .                       
T Consensus        18 ~~nED~~~~------~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~-------~-----------------------   61 (237)
T 1txo_A           18 ANNEDSVYA------GARLLALADGMGGHAAGEVASQLVIAALAHLDDD-------E-----------------------   61 (237)
T ss_dssp             SSCCEEEEE------CSSEEEEEEEECTTTHHHHHHHHHHHHHGGGGSS-------C-----------------------
T ss_pred             CcCCCcccc------CCCEEEEEeCCCCcHHHHHHHHHHHHHHHHHhhh-------C-----------------------
Confidence            467999864      2236899999999999999999998888754320       0                       


Q ss_pred             hhhhhHHhhhcCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCceEEEEEEeCCeEEEEEeCCc
Q 015410          235 DSAANSFANASLHPEREISSSFQHAVLDSLQRALNQAENDFLHMVEQEMEDRPDLVSVGSCVLLVLLHGNDLYTLNLGDS  314 (407)
Q Consensus       235 ~~~l~~~~~~~~~~~~~~~~~~~~~v~~aL~~AF~~lD~di~~~~~~~~~~~~~~a~sGSTAlvalI~~~~L~VANvGDS  314 (407)
                                         .  ..++.++|+++|.+++..+.....+    .+....+|||++++++.++++|+||+|||
T Consensus        62 -------------------~--~~~~~~~l~~a~~~~~~~i~~~~~~----~~~~~~~gtT~~~~~i~~~~l~~a~vGDs  116 (237)
T 1txo_A           62 -------------------P--GGDLLAKLDAAVRAGNSAIAAQVEM----EPDLEGMGTTLTAILFAGNRLGLVHIGDS  116 (237)
T ss_dssp             -------------------C--CSCHHHHHHHHHHHHHHHHHHHHHH----CGGGTTCEECEEEEEEETTEEEEEEESSC
T ss_pred             -------------------C--chhHHHHHHHHHHHHHHHHHHHHhh----CCCCCCCcceEEEEEEECCEEEEEEEccC
Confidence                               0  0145788999999999999876554    33345689999999999999999999999


Q ss_pred             eEEEEecCCcccccCCCceeEEecCCCCCCCCHHHHHHHHhcCCCCCCceecC--cccCcccccccccCCccccccceec
Q 015410          315 RAVLATYDEVNDLSGHKRLKAIQLTESHTVENEDERTRLLSEHPDDPMPILAG--KVKGKLKVTRAFGVGYLKKVHIQYC  392 (407)
Q Consensus       315 RAVL~~~~~~~~~~~~g~~~a~~LT~DH~~~n~~E~~RI~~~hP~~~~vi~~g--RV~G~LavTRAfGD~~lK~~~l~~~  392 (407)
                      |+||++.+           ++++||.||++.++     +...+    .+....  .......+||+||+... .+.+...
T Consensus       117 r~~l~r~g-----------~~~~lt~dh~~~~~-----~~~~G----~i~~~~~~~~~~~~~~tr~lg~~~~-~p~~~~~  175 (237)
T 1txo_A          117 RGYLLRDG-----------ELTQITKDDTFVQT-----LVDEG----RITPEEAHSHPQRSLIMRALTGHEV-EPTLTMR  175 (237)
T ss_dssp             EEEEEETT-----------EEEECSCCCBHHHH-----HHHTT----SSCTTGGGGCTTTTCBCCCBSSSCC-CCEEEEE
T ss_pred             cEEEEeCC-----------EeEEeCCCCCHHHH-----HHHcC----CCCHHHHhhCccccceeeccCCCCc-cceEEEE
Confidence            99999987           89999999998543     33332    111000  01123458999998654 4677778


Q ss_pred             ccCCCcEEEEe
Q 015410          393 ALTSDFFISLV  403 (407)
Q Consensus       393 ~l~~~~~i~l~  403 (407)
                      ++.+++.|+|.
T Consensus       176 ~l~~~d~lvl~  186 (237)
T 1txo_A          176 EARAGDRYLLC  186 (237)
T ss_dssp             ECCTTCEEEEE
T ss_pred             ecCCCCEEEEE
Confidence            88888877653


No 17 
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A
Probab=99.83  E-value=2.2e-20  Score=174.69  Aligned_cols=159  Identities=21%  Similarity=0.207  Sum_probs=115.0

Q ss_pred             CCCCceEEEEecCCCCeEEEEEEcCCCCh--HHHHHHHHHHHHHHHHhhhhhhhhhccccCCCCCCcccCCccchhhhhh
Q 015410          155 AAGEDRVQAVCSEEHGLLFCAIYDGFNGR--DAADFLAGTLYESVMFYSNLFEWESKIDATRAPDDSEFGGHLQYIFEDE  232 (407)
Q Consensus       155 ~~~EDR~~a~~~~~~g~lffGVFDGHgG~--~aA~~ls~~L~~~I~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (407)
                      ..|||++.+      +..+|+|||||||+  .+|+++.+.|..++...                                
T Consensus        19 ~~neD~~~~------~~~~~~V~DG~Gg~G~~as~~~~~~l~~~~~~~--------------------------------   60 (234)
T 2jfr_A           19 ENNQDACLA------DGILYAVADGFGARGHHASATALKTLSAGFAAA--------------------------------   60 (234)
T ss_dssp             SSCCEEEEE------ETTEEEEEEEESTTHHHHHHHHHHHHHHHHHHS--------------------------------
T ss_pred             CcCCCccee------CCcEEEEEeCCCccHHHHHHHHHHHHHHHHhcC--------------------------------
Confidence            457999854      33358999999977  66666666665443211                                


Q ss_pred             hhhhhhhHHhhhcCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCceEEEEEEeCCe---EEEE
Q 015410          233 RKDSAANSFANASLHPEREISSSFQHAVLDSLQRALNQAENDFLHMVEQEMEDRPDLVSVGSCVLLVLLHGND---LYTL  309 (407)
Q Consensus       233 ~~~~~l~~~~~~~~~~~~~~~~~~~~~v~~aL~~AF~~lD~di~~~~~~~~~~~~~~a~sGSTAlvalI~~~~---L~VA  309 (407)
                                           .    + .++|+++|.++++.+......    .+..  +|||++++++.++.   +++|
T Consensus        61 ---------------------~----~-~~~l~~~~~~~~~~l~~~~~~----~~~~--~gtT~~~~~i~~~~~~~l~~a  108 (234)
T 2jfr_A           61 ---------------------P----D-RDGLLEAVQQANLRVFELLGD----EPTV--SGTTLTAVAVFEPGQGGPLVV  108 (234)
T ss_dssp             ---------------------C----S-HHHHHHHHHHHHHHHHHHHTT----SSSC--CEECEEEEECCCGGGTSCEEE
T ss_pred             ---------------------C----c-HHHHHHHHHHHHHHHHHhhcc----CCCC--CCccEEEEEEECCCccEEEEE
Confidence                                 0    1 457888999999988765432    2222  89999999999998   9999


Q ss_pred             EeCCceEEEEecCCcccccCCCceeEEecCCCCCCCCHHHHHHHHhcCCCCCCceec--CcccCcccccccccCCccccc
Q 015410          310 NLGDSRAVLATYDEVNDLSGHKRLKAIQLTESHTVENEDERTRLLSEHPDDPMPILA--GKVKGKLKVTRAFGVGYLKKV  387 (407)
Q Consensus       310 NvGDSRAVL~~~~~~~~~~~~g~~~a~~LT~DH~~~n~~E~~RI~~~hP~~~~vi~~--gRV~G~LavTRAfGD~~lK~~  387 (407)
                      |+||||+||++.+           ++++||.||++.++     +.+.+    .+...  ....+.+.+||+||+...-.+
T Consensus       109 nvGDsr~~l~r~g-----------~~~~lt~dh~~~~~-----~~~~g----~i~~~~~~~~~~~~~~tralG~~~~~~~  168 (234)
T 2jfr_A          109 NIGDSPLYRIRDG-----------HMEQLTDDHSVAGE-----LVRMG----EITRHEARWHPQRHLLTRALGIGPHIGP  168 (234)
T ss_dssp             EESSCCEEEEETT-----------EEEECSCCCBHHHH-----HHHTT----SSCHHHHTTCTTTTCBSCCBSSSSCCCC
T ss_pred             EEccCceEEEECC-----------EEEEeCCCCCHHHH-----HHHcC----CCCHHHHhcCcccceeeecCcCCCCcee
Confidence            9999999999987           89999999998653     22221    11110  112356789999999876678


Q ss_pred             cceecccCCCcEEEEe
Q 015410          388 HIQYCALTSDFFISLV  403 (407)
Q Consensus       388 ~l~~~~l~~~~~i~l~  403 (407)
                      .+...++.++++|+|.
T Consensus       169 ~~~~~~l~~gd~lll~  184 (234)
T 2jfr_A          169 DVFGIDCGPGDRLLIS  184 (234)
T ss_dssp             EEEECCCCTTCEEEEE
T ss_pred             EEEEEecCCCCEEEEE
Confidence            8888899988887654


No 18 
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans}
Probab=99.83  E-value=2.3e-20  Score=173.29  Aligned_cols=151  Identities=17%  Similarity=0.132  Sum_probs=114.8

Q ss_pred             CeEEEEEEcCCCChHHHHHHHHHHHHHHHHhhhhhhhhhccccCCCCCCcccCCccchhhhhhhhhhhhhHHhhhcCCCc
Q 015410          170 GLLFCAIYDGFNGRDAADFLAGTLYESVMFYSNLFEWESKIDATRAPDDSEFGGHLQYIFEDERKDSAANSFANASLHPE  249 (407)
Q Consensus       170 g~lffGVFDGHgG~~aA~~ls~~L~~~I~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  249 (407)
                      +..+|+|+|||||+.+++++++.+.+.+...+...                                             
T Consensus         9 ~~~l~~VaDG~GG~~~g~~AS~~~~~~l~~~~~~~---------------------------------------------   43 (211)
T 3rnr_A            9 DKAYCVVVDGMGGMIRGDEAAQRALSASVGVLDAG---------------------------------------------   43 (211)
T ss_dssp             TEEEEEEEEECTTSTTHHHHHHHHHHHHHHHHHTT---------------------------------------------
T ss_pred             CccEEEEEeCCcCcHHHHHHHHHHHHHHHHHHhcc---------------------------------------------
Confidence            34468999999999999999999999888765310                                             


Q ss_pred             cccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCceEEEEEEe--CCeEEEEEeCCceEEEEecCCcccc
Q 015410          250 REISSSFQHAVLDSLQRALNQAENDFLHMVEQEMEDRPDLVSVGSCVLLVLLH--GNDLYTLNLGDSRAVLATYDEVNDL  327 (407)
Q Consensus       250 ~~~~~~~~~~v~~aL~~AF~~lD~di~~~~~~~~~~~~~~a~sGSTAlvalI~--~~~L~VANvGDSRAVL~~~~~~~~~  327 (407)
                          .    .    +.++|.++++.+......    .+....+|||+++++++  ++++|+||+||||+||++.+     
T Consensus        44 ----~----~----~~~~~~~an~~l~~~~~~----~~~~~~~GtT~~~~~i~~~~~~~~~anvGDSr~yl~r~g-----  102 (211)
T 3rnr_A           44 ----G----S----PLDAVLAAQAAVHRWASQ----GGILGRTGATMAVAAVNLRDGTLEWASVGDCRVYLFKGG-----  102 (211)
T ss_dssp             ----C----C----HHHHHHHHHHHHHHHHHH----TTCTTSCCEEEEEEEEETTTTEEEEEEESSCEEEEEETT-----
T ss_pred             ----C----C----HHHHHHHHHHHHHHHHhh----ccCCCCcchhheeeeeeeCCCEEEEEEEccCeEEEEeCC-----
Confidence                0    0    136667777777665544    45566799999999999  99999999999999999988     


Q ss_pred             cCCCceeEEecCCCCCCCCHHHHHHHHhcCCCCCCceecCcccCcccccccccCCccccccc--eecccCCCcEEEEe
Q 015410          328 SGHKRLKAIQLTESHTVENEDERTRLLSEHPDDPMPILAGKVKGKLKVTRAFGVGYLKKVHI--QYCALTSDFFISLV  403 (407)
Q Consensus       328 ~~~g~~~a~~LT~DH~~~n~~E~~RI~~~hP~~~~vi~~gRV~G~LavTRAfGD~~lK~~~l--~~~~l~~~~~i~l~  403 (407)
                            ++++||.||++.++.++.++      .+     .+......+||++|+.....+.+  ...++.++++++|.
T Consensus       103 ------~~~~lt~dh~~~~~~~~~g~------~~-----~~~~~~~~ltralG~~~~~~~~~~~~~~~l~~gd~llL~  163 (211)
T 3rnr_A          103 ------RLSRLSLDHNVSSEMVLLGR------GP-----VPGPAGEMITSFIGIENLTEISTSEAPLPLEAGEGVLVV  163 (211)
T ss_dssp             ------EEEECCCCCBHHHHHHHTTS------CC-----CCSHHHHCBSCCBTCSSCCCCEECSSCEECCTTCEEEEE
T ss_pred             ------EEEEECCCcHHHHHHHHcCC------Ch-----hhCCCccEEecccCCCCCcceeEecceecCCCCCEEEEE
Confidence                  89999999998654333222      11     22223456899999988877887  77888888887764


No 19 
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A*
Probab=98.40  E-value=1.2e-06  Score=81.66  Aligned_cols=109  Identities=13%  Similarity=0.100  Sum_probs=65.3

Q ss_pred             CCCCceEEEEecCCCCeEEEEEEcCCCChHHHHHHHHHHHHHHHHhhhhhhhhhccccCCCCCCcccCCccchhhhhhhh
Q 015410          155 AAGEDRVQAVCSEEHGLLFCAIYDGFNGRDAADFLAGTLYESVMFYSNLFEWESKIDATRAPDDSEFGGHLQYIFEDERK  234 (407)
Q Consensus       155 ~~~EDR~~a~~~~~~g~lffGVFDGHgG~~aA~~ls~~L~~~I~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (407)
                      ..+.|.+.+....+..+ +|+|.||.|+...|.+++..+...+...+..                               
T Consensus        21 ~v~GD~y~~~~~~~~~~-~~~vaDg~G~G~~aa~~s~~~~~~l~~~~~~-------------------------------   68 (242)
T 3t91_A           21 LVSGDSYSMMELGARKY-AAAISDGMGNGARAHFESNETIKLLEKILES-------------------------------   68 (242)
T ss_dssp             SCCSCEEEEEEETTTEE-EEEEECC-----CCSEEECHHHHHHHHHHHH-------------------------------
T ss_pred             ccCCcEEEEEEeCCCeE-EEEEEeeCCCCHHHHHHHHHHHHHHHHHHHh-------------------------------
Confidence            34588887665554444 5899999998777766666555555443210                               


Q ss_pred             hhhhhHHhhhcCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCceEEEEEEe--CCeEEEEEeC
Q 015410          235 DSAANSFANASLHPEREISSSFQHAVLDSLQRALNQAENDFLHMVEQEMEDRPDLVSVGSCVLLVLLH--GNDLYTLNLG  312 (407)
Q Consensus       235 ~~~l~~~~~~~~~~~~~~~~~~~~~v~~aL~~AF~~lD~di~~~~~~~~~~~~~~a~sGSTAlvalI~--~~~L~VANvG  312 (407)
                                         . .  +    +..++.++++.+...         ....+++|+++++++  ++.++++|+|
T Consensus        69 -------------------~-~--~----~~~~l~~~n~~l~~~---------~~~~~~~T~~~~~id~~~~~l~~~~aG  113 (242)
T 3t91_A           69 -------------------G-I--D----EKIAIKTINSILSLR---------TTDEIYSTLDLSIIDLQDASCKFLKVG  113 (242)
T ss_dssp             -------------------T-C--C----HHHHHHHHHHHHTTC-------------CCCCEEEEEEETTTCEEEEEEES
T ss_pred             -------------------C-C--C----HHHHHHHHHHHHHhc---------CCCCeEeEEEEEEEECCCCEEEEEcCC
Confidence                               0 0  0    122333344433221         112468999999998  6899999999


Q ss_pred             CceEEEEecCCcccccCCCceeEEecCCC
Q 015410          313 DSRAVLATYDEVNDLSGHKRLKAIQLTES  341 (407)
Q Consensus       313 DSRAVL~~~~~~~~~~~~g~~~a~~LT~D  341 (407)
                      |+|+++.+.+           ++.+|+.+
T Consensus       114 ~~~~~l~r~g-----------~~~~l~~~  131 (242)
T 3t91_A          114 STPSFIKRGD-----------QVMKVQAS  131 (242)
T ss_dssp             CCCEEEEETT-----------EEEECCCC
T ss_pred             CCceEEEECC-----------EEEEecCC
Confidence            9999999877           77887654


No 20 
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus}
Probab=98.30  E-value=2.2e-05  Score=73.61  Aligned_cols=112  Identities=16%  Similarity=0.112  Sum_probs=76.9

Q ss_pred             CCCCceEEEEecCCCCeEEEEEEcCCCChHHHHHHHHHHHHHHHHhhhhhhhhhccccCCCCCCcccCCccchhhhhhhh
Q 015410          155 AAGEDRVQAVCSEEHGLLFCAIYDGFNGRDAADFLAGTLYESVMFYSNLFEWESKIDATRAPDDSEFGGHLQYIFEDERK  234 (407)
Q Consensus       155 ~~~EDR~~a~~~~~~g~lffGVFDGHgG~~aA~~ls~~L~~~I~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (407)
                      ..+.|.+.+....+.. ++|.|.||.|+...|..++..+...+...+..       .                       
T Consensus        24 ~vgGD~y~~~~~~~~~-~~~~vaD~~G~G~~aa~~s~~~~~~l~~~~~~-------~-----------------------   72 (242)
T 3pu9_A           24 RESGDTVELVERPGGG-FSAVLVDGQGSGAGAKRLSLLVAGAAVRLLNE-------G-----------------------   72 (242)
T ss_dssp             SSCSEEEEEEECTTSE-EEEEEEEESSSHHHHHHHHHHHHHHHHHHHHT-------T-----------------------
T ss_pred             ccCCceEEEEEeCCCE-EEEEEEecCCCCHHHHHHHHHHHHHHHHHHHc-------C-----------------------
Confidence            3457888766555444 45899999999999998888776666543320       0                       


Q ss_pred             hhhhhHHhhhcCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCceEEEEEEe--CCeEEEEEeC
Q 015410          235 DSAANSFANASLHPEREISSSFQHAVLDSLQRALNQAENDFLHMVEQEMEDRPDLVSVGSCVLLVLLH--GNDLYTLNLG  312 (407)
Q Consensus       235 ~~~l~~~~~~~~~~~~~~~~~~~~~v~~aL~~AF~~lD~di~~~~~~~~~~~~~~a~sGSTAlvalI~--~~~L~VANvG  312 (407)
                                           .  .    +..++.++++.+...       ..  ..+++|+++++++  ++.++++|+|
T Consensus        73 ---------------------~--~----~~~~l~~~n~~l~~~-------~~--~~~~~T~~~~~id~~~~~l~~~~aG  116 (242)
T 3pu9_A           73 ---------------------V--R----DGAAARAAHDFLYAM-------RD--GKVSAALDILSVDLASRSVLVTRNS  116 (242)
T ss_dssp             ---------------------C--C----HHHHHHHHHHHHHHH-------TT--TCCCEEEEEEEEETTTTEEEEEEES
T ss_pred             ---------------------C--C----HHHHHHHHHHHHHhc-------cC--CCcEEEEEEEEEECCCCEEEEEeCC
Confidence                                 0  0    123444555555321       11  2367999999997  6789999999


Q ss_pred             CceEEEEecCCcccccCCCceeEEecCCCCCC
Q 015410          313 DSRAVLATYDEVNDLSGHKRLKAIQLTESHTV  344 (407)
Q Consensus       313 DSRAVL~~~~~~~~~~~~g~~~a~~LT~DH~~  344 (407)
                      |++++|.+.+           ++.+|+.+|.+
T Consensus       117 ~~~~~l~r~g-----------~~~~l~~~~~~  137 (242)
T 3pu9_A          117 EVPMLLGRNG-----------EFEQISESGGR  137 (242)
T ss_dssp             CCCEEEEETT-----------EEEEECCCCCC
T ss_pred             CCcEEEEECC-----------EEEEeCCCCcc
Confidence            9999999877           88899887643


No 21 
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A
Probab=97.64  E-value=0.0013  Score=61.48  Aligned_cols=118  Identities=13%  Similarity=-0.042  Sum_probs=68.1

Q ss_pred             CCCceEEEEecCCCCeEEEEEEcCCCChHHHHHHHHHHHHHHHHhhhhhhhhhccccCCCCCCcccCCccchhhhhhhhh
Q 015410          156 AGEDRVQAVCSEEHGLLFCAIYDGFNGRDAADFLAGTLYESVMFYSNLFEWESKIDATRAPDDSEFGGHLQYIFEDERKD  235 (407)
Q Consensus       156 ~~EDR~~a~~~~~~g~lffGVFDGHgG~~aA~~ls~~L~~~I~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (407)
                      .+-|.+-+....++. ++|.|.||.|+...|.+++..+...+...+....    ...                       
T Consensus        50 vgGD~yd~~~~~~~~-~~~~vaD~~GhG~~aa~~s~~~~~~~~~~~~~~~----~~~-----------------------  101 (255)
T 3f79_A           50 LSGDFVDYFRVDERR-VAFYLADVSGHGASSAFVTVLLKFMTTRLLYESR----RNG-----------------------  101 (255)
T ss_dssp             SCSEEEEEEEETTTE-EEEEEEEESSCSHHHHHHHHHHHHHHHHHHHHHT----TCC-----------------------
T ss_pred             cCceEEeEEEeCCCE-EEEEEEEecCCCHHHHHHHHHHHHHHHHHHHhhc----ccc-----------------------
Confidence            346776555544444 4589999999777777777666555544322100    000                       


Q ss_pred             hhhhHHhhhcCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCceEEEEEEe--CCeEEEEEeCC
Q 015410          236 SAANSFANASLHPEREISSSFQHAVLDSLQRALNQAENDFLHMVEQEMEDRPDLVSVGSCVLLVLLH--GNDLYTLNLGD  313 (407)
Q Consensus       236 ~~l~~~~~~~~~~~~~~~~~~~~~v~~aL~~AF~~lD~di~~~~~~~~~~~~~~a~sGSTAlvalI~--~~~L~VANvGD  313 (407)
                                        .    .....+..++.++++.+..        .  ...+|+|+++++++  ++.++++|+||
T Consensus       102 ------------------~----~~~~~p~~~l~~ln~~l~~--------~--~~~~~~T~~~~~id~~~~~l~~~~aGh  149 (255)
T 3f79_A          102 ------------------T----LPEFKPSEVLAHINRGLIN--------T--KLGKHVTMLGGVIDLEKNSLTYSIGGH  149 (255)
T ss_dssp             ------------------C--------CHHHHHHHHHHHHBT--------T--BSSCCEEEEEEEEETTTTEEEEEECSC
T ss_pred             ------------------c----cccCCHHHHHHHHHHHHHh--------c--CCCCEEEEEEEEEECCCCEEEEEeCCC
Confidence                              0    0011133444455555532        1  13479999999996  67899999999


Q ss_pred             c-eEEEEecCCcccccCCCceeEEecCCCCCC
Q 015410          314 S-RAVLATYDEVNDLSGHKRLKAIQLTESHTV  344 (407)
Q Consensus       314 S-RAVL~~~~~~~~~~~~g~~~a~~LT~DH~~  344 (407)
                      + +.+|.+.+           ++.+|+.+|.|
T Consensus       150 ~p~~~l~~~g-----------~~~~l~~~~~~  170 (255)
T 3f79_A          150 LPLPVLFVEG-----------QAGYLEGRGLP  170 (255)
T ss_dssp             SCCCEEEC-------------CEEECCC----
T ss_pred             CCceEEEeCC-----------eEEEeCCCCce
Confidence            5 57888765           67788877644


No 22 
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica}
Probab=95.93  E-value=0.23  Score=44.33  Aligned_cols=31  Identities=10%  Similarity=0.082  Sum_probs=27.6

Q ss_pred             CCceEEEEEEe--CCeEEEEEeCCceEEEEecC
Q 015410          292 VGSCVLLVLLH--GNDLYTLNLGDSRAVLATYD  322 (407)
Q Consensus       292 sGSTAlvalI~--~~~L~VANvGDSRAVL~~~~  322 (407)
                      .|+|++++.++  .+.++++|+|+++.+|.+.+
T Consensus        80 ~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~  112 (193)
T 3zt9_A           80 RGAVAALCRVDRRQGLWQAAIVGNIHVKILSAK  112 (193)
T ss_dssp             SCEEEEEEEEETTTTEEEEEEESSCEEEEEETT
T ss_pred             CceEEEEEEEECCCCEEEEEecCCceEEEEcCC
Confidence            47899999998  57899999999999999876


No 23 
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=89.67  E-value=3  Score=41.37  Aligned_cols=32  Identities=19%  Similarity=0.208  Sum_probs=27.9

Q ss_pred             CCCceEEEEEEe--CCeEEEEEeCCceEEEEecC
Q 015410          291 SVGSCVLLVLLH--GNDLYTLNLGDSRAVLATYD  322 (407)
Q Consensus       291 ~sGSTAlvalI~--~~~L~VANvGDSRAVL~~~~  322 (407)
                      .+++|++++.++  .+.+.++|+|....++.+.+
T Consensus       117 ~~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~  150 (399)
T 3ke6_A          117 SKSATMCVGSLDFTSGEFQYCTAGHPPPLLVTAD  150 (399)
T ss_dssp             CTTCEEEEEEEETTTCEEEEEEESSCCCEEECTT
T ss_pred             CcEEEEEEEEEECCCCEEEEECCCCChhEEEeCC
Confidence            468999999997  57899999999999999854


Done!