Your job contains 1 sequence.
>015413
MTGNESESELPVPPYPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH
FSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLLSQHPRNFNLDVSGPRVLFC
ADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLMR
FFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEV
SEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRM
PVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSFTVPGSLASSHQQLQESFQAFSLSD
NKGKVARGICITRSSLKPDLSNFLVIFPPRCKIDSWYFCLCYAEDFK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 015413
(407 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2084289 - symbol:REP "AT3G06540" species:3702 ... 994 9.4e-122 2
FB|FBgn0026378 - symbol:Rep "Rab escort protein" species:... 412 1.6e-38 1
UNIPROTKB|E2RKG1 - symbol:CHM "Uncharacterized protein" s... 287 2.7e-38 2
MGI|MGI:101913 - symbol:Chml "choroideremia-like" species... 292 5.3e-38 2
UNIPROTKB|P24386 - symbol:CHM "Rab proteins geranylgerany... 283 1.2e-37 2
UNIPROTKB|K7GR66 - symbol:CHM "Uncharacterized protein" s... 285 3.4e-37 2
MGI|MGI:892979 - symbol:Chm "choroidermia" species:10090 ... 284 1.1e-36 2
DICTYBASE|DDB_G0280143 - symbol:DDB_G0280143 "Rab escort ... 307 1.8e-36 2
UNIPROTKB|F1N2I0 - symbol:CHML "Uncharacterized protein" ... 277 9.1e-35 2
RGD|2340 - symbol:Chm "choroideremia (Rab escort protein ... 278 2.1e-34 2
UNIPROTKB|P37727 - symbol:Chm "Rab proteins geranylgerany... 278 2.1e-34 2
UNIPROTKB|P26374 - symbol:CHML "Rab proteins geranylgeran... 276 4.6e-34 2
UNIPROTKB|F1NEX6 - symbol:CHM "Uncharacterized protein" s... 277 2.2e-33 2
UNIPROTKB|F1S9E9 - symbol:CHML "Uncharacterized protein" ... 277 7.7e-32 2
TAIR|locus:2144741 - symbol:GDI "RAB GDP-dissociation inh... 254 9.5e-32 3
WB|WBGene00022051 - symbol:rep-1 species:6239 "Caenorhabd... 263 3.6e-30 2
UNIPROTKB|K7GL59 - symbol:CHM "Uncharacterized protein" s... 237 1.2e-29 2
DICTYBASE|DDB_G0268034 - symbol:DDB_G0268034 "Rab GDP dis... 253 1.4e-29 3
ZFIN|ZDB-GENE-050522-504 - symbol:gdi1 "GDP dissociation ... 249 3.9e-29 2
UNIPROTKB|F1MS24 - symbol:CHM "Uncharacterized protein" s... 298 2.0e-28 2
UNIPROTKB|P21856 - symbol:GDI1 "Rab GDP dissociation inhi... 247 2.5e-28 2
MGI|MGI:99846 - symbol:Gdi1 "guanosine diphosphate (GDP) ... 247 2.5e-28 2
UNIPROTKB|I3L893 - symbol:GDI1 "Uncharacterized protein" ... 246 3.3e-28 2
UNIPROTKB|F1PWQ0 - symbol:GDI1 "Rab GDP dissociation inhi... 245 4.5e-28 2
UNIPROTKB|O97555 - symbol:GDI1 "Rab GDP dissociation inhi... 245 4.5e-28 2
UNIPROTKB|Q7YQM0 - symbol:GDI1 "Rab GDP dissociation inhi... 244 6.3e-28 2
UNIPROTKB|Q8HXX7 - symbol:GDI1 "Rab GDP dissociation inhi... 244 6.3e-28 2
RGD|2676 - symbol:Gdi1 "GDP dissociation inhibitor 1" spe... 244 6.3e-28 2
UNIPROTKB|P31150 - symbol:GDI1 "Rab GDP dissociation inhi... 243 8.4e-28 2
UNIPROTKB|P60028 - symbol:GDI1 "Rab GDP dissociation inhi... 243 8.4e-28 2
UNIPROTKB|J9P1V4 - symbol:GDI1 "Rab GDP dissociation inhi... 245 9.5e-28 2
UNIPROTKB|F1RUK8 - symbol:GDI2 "Rab GDP dissociation inhi... 235 1.1e-27 3
UNIPROTKB|Q6Q7J2 - symbol:GDI2 "Rab GDP dissociation inhi... 235 1.1e-27 3
UNIPROTKB|P50395 - symbol:GDI2 "Rab GDP dissociation inhi... 233 2.8e-27 3
UNIPROTKB|P50397 - symbol:GDI2 "Rab GDP dissociation inhi... 234 3.1e-27 3
UNIPROTKB|O97556 - symbol:GDI2 "Rab GDP dissociation inhi... 239 5.8e-27 2
POMBASE|SPAC22H10.12c - symbol:gdi1 "GDP dissociation inh... 237 5.9e-27 2
MGI|MGI:99845 - symbol:Gdi2 "guanosine diphosphate (GDP) ... 232 6.1e-27 3
RGD|61802 - symbol:Gdi2 "GDP dissociation inhibitor 2" sp... 232 6.1e-27 3
TAIR|locus:2080527 - symbol:GDI2 "RAB GDP dissociation in... 247 1.4e-26 2
TAIR|locus:2051839 - symbol:GDI1 "guanosine nucleotide di... 246 1.5e-26 2
UNIPROTKB|E1BT45 - symbol:CHM "Uncharacterized protein" s... 303 4.2e-26 1
WB|WBGene00001558 - symbol:gdi-1 species:6239 "Caenorhabd... 233 1.1e-25 2
UNIPROTKB|F1S1P6 - symbol:CHM "Uncharacterized protein" s... 285 1.4e-25 2
FB|FBgn0004868 - symbol:Gdi "GDP dissociation inhibitor" ... 237 1.9e-25 3
ZFIN|ZDB-GENE-030318-2 - symbol:chm "choroideremia (Rab e... 234 2.4e-25 2
CGD|CAL0004982 - symbol:orf19.6783 species:5476 "Candida ... 295 3.3e-25 1
UNIPROTKB|Q5ADQ8 - symbol:MRS6 "Putative uncharacterized ... 295 3.3e-25 1
ZFIN|ZDB-GENE-030131-2485 - symbol:gdi2 "GDP dissociation... 224 8.3e-25 2
CGD|CAL0003925 - symbol:orf19.7261 species:5476 "Candida ... 222 1.5e-24 2
UNIPROTKB|Q5SX87 - symbol:GDI2 "Rab GDP dissociation inhi... 187 1.2e-23 2
ZFIN|ZDB-GENE-050809-120 - symbol:zgc:112334 "zgc:112334"... 199 1.2e-23 2
UNIPROTKB|F1P112 - symbol:GDI2 "Uncharacterized protein" ... 234 1.4e-23 2
POMBASE|SPBC15C4.03 - symbol:SPBC15C4.03 "Rab geranylgera... 282 1.8e-23 1
UNIPROTKB|B4DRL9 - symbol:CHM "Rab proteins geranylgerany... 283 1.9e-23 1
UNIPROTKB|E7EU23 - symbol:GDI2 "Rab GDP dissociation inhi... 233 4.1e-23 3
UNIPROTKB|F1P8L7 - symbol:GDI2 "Rab GDP dissociation inhi... 235 1.1e-22 2
UNIPROTKB|F1NCZ2 - symbol:GDI2 "Uncharacterized protein" ... 234 1.9e-22 2
UNIPROTKB|G4MT60 - symbol:MGG_07137 "Rab GDP-dissociation... 188 7.9e-20 2
UNIPROTKB|G5EHS7 - symbol:MGCH7_ch7g422 "Rab protein gera... 248 1.2e-18 1
GENEDB_PFALCIPARUM|PFL2060c - symbol:PFL2060c "rabGDI pro... 171 3.6e-18 2
UNIPROTKB|Q8I501 - symbol:PFL2060c "RabGDI protein" speci... 171 3.6e-18 2
SGD|S000000938 - symbol:GDI1 "GDP dissociation inhibitor"... 235 2.6e-17 1
SGD|S000005897 - symbol:MRS6 "Rab escort protein" species... 231 1.6e-16 1
ASPGD|ASPL0000003017 - symbol:gdiA species:162425 "Emeric... 218 2.9e-15 1
UNIPROTKB|G5E9U5 - symbol:GDI1 "GDP dissociation inhibito... 127 5.9e-13 2
UNIPROTKB|Q5SX91 - symbol:GDI2 "Rab GDP dissociation inhi... 153 2.8e-12 2
UNIPROTKB|F1LWU5 - symbol:F1LWU5 "Uncharacterized protein... 114 0.00070 1
>TAIR|locus:2084289 [details] [associations]
symbol:REP "AT3G06540" species:3702 "Arabidopsis
thaliana" [GO:0005093 "Rab GDP-dissociation inhibitor activity"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0015031
"protein transport" evidence=ISS] [GO:0017137 "Rab GTPase binding"
evidence=IDA] [GO:2000541 "positive regulation of protein
geranylgeranylation" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR000632 PRINTS:PR00894 Pfam:PF00996
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006886
GO:GO:2000541 GO:GO:0017137 eggNOG:COG5044 InterPro:IPR018203
PRINTS:PR00891 InterPro:IPR016664 PIRSF:PIRSF016550 OMA:SLSNFHT
HSSP:P37727 EMBL:AF409086 IPI:IPI00522743 RefSeq:NP_187306.2
UniGene:At.40504 ProteinModelPortal:Q8LLD4 SMR:Q8LLD4 STRING:Q8LLD4
PaxDb:Q8LLD4 PRIDE:Q8LLD4 EnsemblPlants:AT3G06540.1 GeneID:819832
KEGG:ath:AT3G06540 TAIR:At3g06540 HOGENOM:HOG000030579
InParanoid:Q8LLD4 PhylomeDB:Q8LLD4 ProtClustDB:CLSN2690521
Genevestigator:Q8LLD4 Uniprot:Q8LLD4
Length = 563
Score = 994 (355.0 bits), Expect = 9.4e-122, Sum P(2) = 9.4e-122
Identities = 194/312 (62%), Positives = 252/312 (80%)
Query: 87 LYSDVEISNYASRLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATF 146
LYS VEIS++ S +L +H R FN+D++GPRV+FCAD +++LMLKSGA++Y+EFKSIDA+F
Sbjct: 99 LYSSVEISSFESEILEEHSRRFNVDLAGPRVVFCADESINLMLKSGANNYVEFKSIDASF 158
Query: 147 MLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHL--SLDESEENNVRISEE 204
+ D+ +L +VPDSRAAIFKDKSL L+EKNQLM+FFKLVQ HL S ++ + V+ISEE
Sbjct: 159 VGDSSGELRNVPDSRAAIFKDKSLTLLEKNQLMKFFKLVQSHLASSTEKDDSTTVKISEE 218
Query: 205 DLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSE---YVLKTRDGINRLALYNSSI 261
D++SPF +FL+KM+LP KIKSI+LYAIAM DYDQ+ +E ++LKT++GI+RLALY +S+
Sbjct: 219 DMESPFVDFLSKMRLPPKIKSIILYAIAMLDYDQDNTETCRHLLKTKEGIDRLALYITSM 278
Query: 262 GRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLAS 321
GRF NALGALIYPIYGQGELPQAFCRRAAVKGC+YVLRMP+ +LL D+ +G YKGVRLAS
Sbjct: 279 GRFSNALGALIYPIYGQGELPQAFCRRAAVKGCIYVLRMPITALLLDKETGGYKGVRLAS 338
Query: 322 GQDILSHKLVLDPSFTVP-GSLASSHQQLQESFQAFSLSD--NKGKVARGICITRSSLKP 378
GQ+I S KL+LDP TV SL+S Q E+ NK K+ARG+C+ R S+K
Sbjct: 339 GQEIFSQKLILDPCVTVGLESLSSLTDQQNETLSVLVPKSMINKEKIARGVCVIRGSVKA 398
Query: 379 DLSNFLVIFPPR 390
++SN LV++PP+
Sbjct: 399 NVSNALVVYPPK 410
Score = 224 (83.9 bits), Expect = 9.4e-122, Sum P(2) = 9.4e-122
Identities = 45/67 (67%), Positives = 55/67 (82%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHST--PS 80
+DLIV+GTG+ ESV++AAAS+SG SVLHLDPNPFYGSHF+SLS+ DLT FL+S+S P
Sbjct: 15 YDLIVVGTGVSESVLAAAASSSGSSVLHLDPNPFYGSHFASLSLPDLTSFLHSNSVSPPP 74
Query: 81 SVCPDPL 87
S PL
Sbjct: 75 SPSSPPL 81
>FB|FBgn0026378 [details] [associations]
symbol:Rep "Rab escort protein" species:7227 "Drosophila
melanogaster" [GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS;NAS]
[GO:0005968 "Rab-protein geranylgeranyltransferase complex"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0000922
"spindle pole" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0016020 "membrane" evidence=ISS]
[GO:0005818 "aster" evidence=IDA] [GO:0007269 "neurotransmitter
secretion" evidence=NAS] [GO:0016192 "vesicle-mediated transport"
evidence=NAS] [GO:0008021 "synaptic vesicle" evidence=NAS]
Pfam:PF00996 EMBL:AE013599 GO:GO:0048471 GO:GO:0016020
GO:GO:0016192 GO:GO:0005096 GO:GO:0043547 GO:GO:0008021
GO:GO:0007049 GO:GO:0000922 GO:GO:0007269 GO:GO:0005818
eggNOG:COG5044 InterPro:IPR018203 PRINTS:PR00891
GeneTree:ENSGT00530000063044 EMBL:AF105063 EMBL:AY061052
RefSeq:NP_477420.1 UniGene:Dm.3110 ProteinModelPortal:Q9V8W3
SMR:Q9V8W3 MINT:MINT-1566239 PaxDb:Q9V8W3 PRIDE:Q9V8W3
EnsemblMetazoa:FBtr0086462 GeneID:37246 KEGG:dme:Dmel_CG8432
CTD:37246 FlyBase:FBgn0026378 InParanoid:Q9V8W3 OMA:GGIYCLK
OrthoDB:EOG495X6Z PhylomeDB:Q9V8W3 GenomeRNAi:37246 NextBio:802713
Bgee:Q9V8W3 GermOnline:CG8432 InterPro:IPR016664 PIRSF:PIRSF016550
Uniprot:Q9V8W3
Length = 511
Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 109/323 (33%), Positives = 167/323 (51%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSV 82
FDL+VIGTG ES I+AA S GKSVLHLD N +YG +SS S+ L L+ P S
Sbjct: 9 FDLVVIGTGFTESCIAAAGSRIGKSVLHLDSNEYYGDVWSSFSMDALCARLDQEVEPHSA 68
Query: 83 CPDPLY--------SDVEISNYASRLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGAS 134
+ Y S+ + ++ + R F+LD+ PR+L+ A V L++KS
Sbjct: 69 LRNARYTWHSMEKESETDAQSWNRDSVLAKSRRFSLDLC-PRILYAAGELVQLLIKSNIC 127
Query: 135 HYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDES 194
Y EF+++D M + ++ SVP SR+ +F K+L ++EK LM+F + D+
Sbjct: 128 RYAEFRAVDHVCMRH-NGEIVSVPCSRSDVFNTKTLTIVEKRLLMKFLTACNDY-GEDKC 185
Query: 195 EENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRL 254
E+++ E F E+L ++ KI S V+ AIAM E G+ R
Sbjct: 186 NEDSL----EFRGRTFLEYLQAQRVTEKISSCVMQAIAMCGPSTSFEE-------GMQRT 234
Query: 255 ALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSY 314
+ S+GR+ N ++P+YG GELPQ FCR AV G +Y L+ V + D NS +
Sbjct: 235 QRFLGSLGRYGNT--PFLFPMYGCGELPQCFCRLCAVYGGIYCLKRAVDDIALDSNSNEF 292
Query: 315 KGVRLASGQDILSHKLVLDPSFT 337
+ ++G+ + + +V P +T
Sbjct: 293 --LLSSAGKTLRAKNVVSAPGYT 313
>UNIPROTKB|E2RKG1 [details] [associations]
symbol:CHM "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0001568 "blood vessel development"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005968 "Rab-protein geranylgeranyltransferase
complex" evidence=IEA] [GO:0004663 "Rab geranylgeranyltransferase
activity" evidence=IEA] InterPro:IPR001738 PRINTS:PR00893
Pfam:PF00996 GO:GO:0006886 GO:GO:0001568 GO:GO:0004663
InterPro:IPR018203 PRINTS:PR00891 GeneTree:ENSGT00530000063044
GO:GO:0005968 InterPro:IPR016664 PIRSF:PIRSF016550 CTD:1121
OMA:GEKENHC EMBL:AAEX03026619 RefSeq:XP_538092.2
ProteinModelPortal:E2RKG1 Ensembl:ENSCAFT00000027591 GeneID:480972
KEGG:cfa:480972 NextBio:20855867 Uniprot:E2RKG1
Length = 652
Score = 287 (106.1 bits), Expect = 2.7e-38, Sum P(2) = 2.7e-38
Identities = 81/246 (32%), Positives = 124/246 (50%)
Query: 116 RVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEK 175
++L+ +DL++KS S Y EFK+I + + ++ VP SRA +F K L ++EK
Sbjct: 233 KLLYSRGLLIDLLIKSNVSRYAEFKNI-TRILAFREGRVEQVPCSRADVFNSKQLTMVEK 291
Query: 176 NQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMAD 235
LM+F + E + + EE F+E+L KL ++ VL++IAM
Sbjct: 292 RMLMKFLTFCMEY----EKHPDEYKAYEE---ITFSEYLKTQKLTPNLQYFVLHSIAMT- 343
Query: 236 YDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCL 295
SE T DG+ + +GR+ N ++P+YGQGELPQ FCR AV G +
Sbjct: 344 -----SETASNTIDGLKATKNFLHCLGRYGNT--PFLFPLYGQGELPQCFCRMCAVFGGI 396
Query: 296 YVLRMPVISLLTDQNSGSYKGVRLASGQDILS-HKLVLDPSFTVPGSLASSHQQLQESFQ 354
Y LR V L+ D+ S K + GQ I+S H LV D F+ SH Q ++ +
Sbjct: 397 YCLRHSVQCLVVDKESRKCKAIIDQFGQRIISKHFLVEDSYFS---ENTCSHVQYRQISR 453
Query: 355 AFSLSD 360
+ ++D
Sbjct: 454 SVLITD 459
Score = 156 (60.0 bits), Expect = 2.7e-38, Sum P(2) = 2.7e-38
Identities = 32/82 (39%), Positives = 52/82 (63%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSV 82
FD+IVIGTGLPES+I+AA S SG+ VLH+D +YG +++S S + + +L + S +
Sbjct: 9 FDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGILSWLKEYQENSDI 68
Query: 83 CPD-PLYSDVEISNYASRLLSQ 103
+ P + + + N + LS+
Sbjct: 69 VNEGPAWQEQILENEEAIALSR 90
>MGI|MGI:101913 [details] [associations]
symbol:Chml "choroideremia-like" species:10090 "Mus musculus"
[GO:0004663 "Rab geranylgeranyltransferase activity" evidence=IEA]
[GO:0005096 "GTPase activator activity" evidence=IEA] [GO:0005968
"Rab-protein geranylgeranyltransferase complex" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
InterPro:IPR001738 PRINTS:PR00893 MGI:MGI:101913 Pfam:PF00996
GO:GO:0006886 GO:GO:0005096 GO:GO:0043547 GO:GO:0004663
eggNOG:COG5044 InterPro:IPR018203 PRINTS:PR00891
GeneTree:ENSGT00530000063044 EMBL:AF482427 GO:GO:0005968
InterPro:IPR016664 PIRSF:PIRSF016550 HOVERGEN:HBG004961
OrthoDB:EOG441QBB HOGENOM:HOG000231282 CTD:1122 EMBL:AF189156
EMBL:BC118932 IPI:IPI00270187 RefSeq:NP_067325.2 UniGene:Mm.440490
ProteinModelPortal:Q9QZD5 SMR:Q9QZD5 STRING:Q9QZD5
PhosphoSite:Q9QZD5 PRIDE:Q9QZD5 Ensembl:ENSMUST00000104984
GeneID:12663 KEGG:mmu:12663 UCSC:uc007dtr.2 InParanoid:Q0VF88
NextBio:281898 Bgee:Q9QZD5 CleanEx:MM_CHML Genevestigator:Q9QZD5
Uniprot:Q9QZD5
Length = 621
Score = 292 (107.8 bits), Expect = 5.3e-38, Sum P(2) = 5.3e-38
Identities = 79/243 (32%), Positives = 127/243 (52%)
Query: 118 LFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQ 177
L+ +DL++KS S Y EFK++ + + K+ VP SRA +F K L ++EK
Sbjct: 237 LYSQGSLIDLLIKSNVSRYAEFKNV-TRILAFWEGKVEQVPCSRADVFNSKELSMVEKRM 295
Query: 178 LMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYD 237
LM+F LD + ++ ++ F+++L KL ++ +L++IAM
Sbjct: 296 LMKFLTFC-----LDYEQHSDEY--QDFKQCSFSDYLKTKKLTPNLQHFILHSIAMT--- 345
Query: 238 QEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYV 297
SE T DG+ + +GRF N I+P+YG GE+PQ FCR AV G +Y
Sbjct: 346 ---SESSCTTLDGLQATKNFLQCLGRFGNT--PFIFPLYGHGEIPQCFCRMCAVFGGVYC 400
Query: 298 LRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSFTVPGSLASSHQQLQESFQAFS 357
LR V L+ D++SG KG+ A GQ I ++ +++ S+ +P S+ Q Q S +A
Sbjct: 401 LRHKVQCLVVDKDSGRCKGIIDAFGQRISANYFIVEDSY-LPKETCSNVQYKQIS-RAVL 458
Query: 358 LSD 360
++D
Sbjct: 459 ITD 461
Score = 147 (56.8 bits), Expect = 5.3e-38, Sum P(2) = 5.3e-38
Identities = 26/56 (46%), Positives = 40/56 (71%)
Query: 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSH 76
T FD+++IGTGLPES+++AA S SG+ VLH+D +YG +++S S L +L +
Sbjct: 7 TEFDVVIIGTGLPESILAAACSRSGQRVLHVDSRSYYGGNWASFSFTGLQSWLKDY 62
Score = 53 (23.7 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 14/55 (25%), Positives = 26/55 (47%)
Query: 304 SLLTDQNSGSYKGVRLASGQDILSHKLVLDPSFTVPGSLASSHQQLQESFQAFSL 358
SL ++ G + SG+D HKLV+ S P ++ Q+ + + F++
Sbjct: 176 SLEKEKYCGDKTDMHTVSGEDKGEHKLVVQDSIEQPKRNRITYSQMVKESRRFNI 230
>UNIPROTKB|P24386 [details] [associations]
symbol:CHM "Rab proteins geranylgeranyltransferase
component A 1" species:9606 "Homo sapiens" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0005968
"Rab-protein geranylgeranyltransferase complex" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005096 "GTPase activator activity" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] [GO:0050896 "response to
stimulus" evidence=IEA] [GO:0001568 "blood vessel development"
evidence=IEA] [GO:0018344 "protein geranylgeranylation"
evidence=TAS] InterPro:IPR001738 PRINTS:PR00893 Pfam:PF00996
GO:GO:0006886 GO:GO:0005096 GO:GO:0043547 GO:GO:0007601
GO:GO:0050896 GO:GO:0001568 GO:GO:0018344 GO:GO:0004663
eggNOG:COG5044 InterPro:IPR018203 PRINTS:PR00891 GO:GO:0005968
InterPro:IPR016664 PIRSF:PIRSF016550 EMBL:X78121 EMBL:AL009175
EMBL:AL022401 EMBL:AL035451 EMBL:AL138748 EMBL:BC130494
EMBL:BC130496 EMBL:M83773 EMBL:X57637 EMBL:S37423 EMBL:S37416
EMBL:S37417 EMBL:S37422 IPI:IPI00028099 IPI:IPI00641814 PIR:I37234
RefSeq:NP_000381.1 RefSeq:NP_001138886.1 UniGene:Hs.496449
ProteinModelPortal:P24386 SMR:P24386 IntAct:P24386 STRING:P24386
PhosphoSite:P24386 DMDM:21431807 PaxDb:P24386 PRIDE:P24386
Ensembl:ENST00000357749 Ensembl:ENST00000358786 GeneID:1121
KEGG:hsa:1121 UCSC:uc004eet.3 CTD:1121 GeneCards:GC0XM085116
HGNC:HGNC:1940 HPA:CAB016171 HPA:HPA003231 MIM:300390 MIM:303100
neXtProt:NX_P24386 Orphanet:180 PharmGKB:PA26471
HOGENOM:HOG000220905 HOVERGEN:HBG004961 InParanoid:P24386
OMA:GEKENHC OrthoDB:EOG441QBB PhylomeDB:P24386 GenomeRNAi:1121
NextBio:4654 ArrayExpress:P24386 Bgee:P24386 CleanEx:HS_CHM
Genevestigator:P24386 GermOnline:ENSG00000188419 Uniprot:P24386
Length = 653
Score = 283 (104.7 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 80/245 (32%), Positives = 125/245 (51%)
Query: 116 RVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEK 175
++L+ +DL++KS S Y EFK+I + + ++ VP SRA +F K L ++EK
Sbjct: 234 KLLYSRGLLIDLLIKSNVSRYAEFKNI-TRILAFREGRVEQVPCSRADVFNSKQLTMVEK 292
Query: 176 NQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMAD 235
LM+F + E + + EE F E+L KL ++ IV+++IAM
Sbjct: 293 RMLMKFLTFCMEY----EKYPDEYKGYEE---ITFYEYLKTQKLTPNLQYIVMHSIAMT- 344
Query: 236 YDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCL 295
SE T DG+ + +GR+ N ++P+YGQGELPQ FCR AV G +
Sbjct: 345 -----SETASSTIDGLKATKNFLHCLGRYGNT--PFLFPLYGQGELPQCFCRMCAVFGGI 397
Query: 296 YVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSFTVPGSLASSHQQLQESFQA 355
Y LR V L+ D+ S K + GQ I+S +++ S+ P ++ S Q Q S +A
Sbjct: 398 YCLRHSVQCLVVDKESRKCKAIIDQFGQRIISEHFLVEDSY-FPENMCSRVQYRQIS-RA 455
Query: 356 FSLSD 360
++D
Sbjct: 456 VLITD 460
Score = 170 (64.9 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 35/82 (42%), Positives = 53/82 (64%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSV 82
FD+IVIGTGLPES+I+AA S SG+ VLH+D +YG +++S S + L +L + S +
Sbjct: 9 FDVIVIGTGLPESIIAAACSRSGRRVLHVDSRSYYGGNWASFSFSGLLSWLKEYQENSDI 68
Query: 83 CPD-PLYSDVEISNYASRLLSQ 103
D P++ D + N + LS+
Sbjct: 69 VSDSPVWQDQILENEEAIALSR 90
>UNIPROTKB|K7GR66 [details] [associations]
symbol:CHM "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005968 "Rab-protein geranylgeranyltransferase complex"
evidence=IEA] [GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=IEA] InterPro:IPR001738 PRINTS:PR00893 Pfam:PF00996
InterPro:IPR018203 PRINTS:PR00891 GeneTree:ENSGT00530000063044
InterPro:IPR016664 PIRSF:PIRSF016550 EMBL:FP102371 EMBL:FP236348
EMBL:FP340307 Ensembl:ENSSSCT00000034932 Uniprot:K7GR66
Length = 653
Score = 285 (105.4 bits), Expect = 3.4e-37, Sum P(2) = 3.4e-37
Identities = 73/221 (33%), Positives = 114/221 (51%)
Query: 116 RVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEK 175
++L+ +DL++KS S Y EFK+I + + ++ VP SRA +F K L ++EK
Sbjct: 234 KLLYSRGLLIDLLIKSNVSRYAEFKNI-TRILAFREGRVEQVPCSRADVFNSKQLTMVEK 292
Query: 176 NQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMAD 235
LM+F + E + + EE F+E+L KL ++ VL++IAM
Sbjct: 293 RMLMKFLTFCMDY----EEYPDEYKAYEE---ISFSEYLKTQKLTPNLQYFVLHSIAMT- 344
Query: 236 YDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCL 295
SE T DG+ + +GR+ N ++P+YGQGELPQ FCR AV G +
Sbjct: 345 -----SETASSTIDGLKATQNFLHCLGRYGNT--PFLFPLYGQGELPQCFCRMCAVFGGI 397
Query: 296 YVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSF 336
Y LR V L+ D+ SG K + GQ I++ +++ S+
Sbjct: 398 YCLRHSVQCLVVDKESGKCKAIIDHFGQRIIAKHFIVEDSY 438
Score = 159 (61.0 bits), Expect = 3.4e-37, Sum P(2) = 3.4e-37
Identities = 30/60 (50%), Positives = 43/60 (71%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSV 82
FD+IVIGTGLPES+I+AA S SG+ VLH+D +YG +++S S + L +L H S++
Sbjct: 9 FDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLKEHQENSNI 68
>MGI|MGI:892979 [details] [associations]
symbol:Chm "choroidermia" species:10090 "Mus musculus"
[GO:0001568 "blood vessel development" evidence=IMP] [GO:0004663
"Rab geranylgeranyltransferase activity" evidence=IEA] [GO:0005096
"GTPase activator activity" evidence=IEA] [GO:0005968 "Rab-protein
geranylgeranyltransferase complex" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0017137 "Rab
GTPase binding" evidence=ISO] InterPro:IPR001738 PRINTS:PR00893
MGI:MGI:892979 Pfam:PF00996 GO:GO:0006886 GO:GO:0005096
GO:GO:0043547 GO:GO:0001568 GO:GO:0004663 eggNOG:COG5044
InterPro:IPR018203 PRINTS:PR00891 GO:GO:0005968 InterPro:IPR016664
PIRSF:PIRSF016550 HOVERGEN:HBG004961 EMBL:AF218084 EMBL:BC047461
IPI:IPI00134979 UniGene:Mm.257316 ProteinModelPortal:Q9QXG2
SMR:Q9QXG2 STRING:Q9QXG2 PhosphoSite:Q9QXG2 PaxDb:Q9QXG2
PRIDE:Q9QXG2 HOGENOM:HOG000231282 InParanoid:Q9QXG2 ChiTaRS:CHM
CleanEx:MM_CHM Genevestigator:Q9QXG2 GermOnline:ENSMUSG00000025531
Uniprot:Q9QXG2
Length = 665
Score = 284 (105.0 bits), Expect = 1.1e-36, Sum P(2) = 1.1e-36
Identities = 74/221 (33%), Positives = 113/221 (51%)
Query: 116 RVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEK 175
++L+ +DL++KS S Y EFK+I + + + VP SRA +F K L ++EK
Sbjct: 246 KLLYSRGLLIDLLIKSNVSRYAEFKNI-TRILAFREGTVEQVPCSRADVFNSKQLTMVEK 304
Query: 176 NQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMAD 235
LM+F + E + + EE + F+E+L KL ++ VL++IAM
Sbjct: 305 RMLMKFLTFCVEY----EDHPDEYKAYEE---TTFSEYLKTQKLTPNLQYFVLHSIAMT- 356
Query: 236 YDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCL 295
SE T DG+ + +GR+ N ++P+YGQGELPQ FCR AV G +
Sbjct: 357 -----SETTSSTVDGLKATKKFLQCLGRYGNT--PFLFPLYGQGELPQCFCRMCAVFGGI 409
Query: 296 YVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSF 336
Y LR V L+ D+ S K + GQ I+S V++ S+
Sbjct: 410 YCLRHSVQCLVVDKESRKCKAIVDQFGQRIISKHFVIEDSY 450
Score = 159 (61.0 bits), Expect = 1.1e-36, Sum P(2) = 1.1e-36
Identities = 34/81 (41%), Positives = 52/81 (64%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSV 82
FD+IVIGTGLPES+I+AA S SG+ VLH+D +YG +++S S + L +L + S V
Sbjct: 9 FDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLKEYQENSDV 68
Query: 83 CPD-PLYSDVEISNYASRLLS 102
+ ++ + + N + LLS
Sbjct: 69 VTENSMWQEQILENEEAILLS 89
>DICTYBASE|DDB_G0280143 [details] [associations]
symbol:DDB_G0280143 "Rab escort protein (REP)"
species:44689 "Dictyostelium discoideum" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=ISS] [GO:0018344
"protein geranylgeranylation" evidence=ISS] [GO:0017137 "Rab GTPase
binding" evidence=ISS] [GO:0005968 "Rab-protein
geranylgeranyltransferase complex" evidence=ISS]
dictyBase:DDB_G0280143 Pfam:PF00996 EMBL:AAFI02000035 GO:GO:0017137
GO:GO:0018344 eggNOG:COG5044 InterPro:IPR018203 PRINTS:PR00891
GO:GO:0005968 InterPro:IPR016664 PIRSF:PIRSF016550
RefSeq:XP_641266.1 EnsemblProtists:DDB0232224 GeneID:8622398
KEGG:ddi:DDB_G0280143 InParanoid:Q54VT9 OMA:SFITIPP Uniprot:Q54VT9
Length = 661
Score = 307 (113.1 bits), Expect = 1.8e-36, Sum P(2) = 1.8e-36
Identities = 81/268 (30%), Positives = 141/268 (52%)
Query: 91 VEISNYASRLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDA 150
+++ + + L + R F++D+S P +L+ V L++ S AS YLEFKS+D ++
Sbjct: 162 IDVPLVSDKSLEELGRLFSIDIS-PTLLYGRGALVKLLISSSASRYLEFKSLDQNYLF-T 219
Query: 151 DAKLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLV-----QGHLSLDESE-ENNVRISEE 204
+ K+ +P ++ +IFKD + L EK +M+F + + +G LD++E E + ++S
Sbjct: 220 NGKVHEIPSTKGSIFKDSTFSLKEKRLIMKFMESIRELKKEGS-DLDDAEKEAHFKLSII 278
Query: 205 DLDSPFAEFLT---KMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYNSSI 261
+L F F+ K ++S +LY +++ D E L+T GI + LY SS+
Sbjct: 279 ELGKQFKSFIDYIKSFKFTQLVESFILYGLSLIHEDLE--SIPLET--GIESVFLYTSSL 334
Query: 262 GRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLAS 321
+ + + P YG G++PQAFCR AV G YVL V S+ +Q +G K + +
Sbjct: 335 LVY--GVSPFLIPYYGVGDIPQAFCRLCAVFGGSYVLGRTVDSIQFNQETGKVKSIICSE 392
Query: 322 GQDILSHKLVLDPSFTVPGSLASSHQQL 349
GQ I + + P + +++SS L
Sbjct: 393 GQTIQTTHFITSPKYL--NTISSSQNNL 418
Score = 118 (46.6 bits), Expect = 1.8e-36, Sum P(2) = 1.8e-36
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFL 73
FD +++GTGL ES+++ A + +GK VLH D YG SS ++ LT L
Sbjct: 16 FDCVILGTGLVESLVAGALARAGKQVLHFDKKVIYGGFDSSFTLGQLTKIL 66
>UNIPROTKB|F1N2I0 [details] [associations]
symbol:CHML "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005968 "Rab-protein geranylgeranyltransferase complex"
evidence=IEA] [GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=IEA] InterPro:IPR001738 PRINTS:PR00893 Pfam:PF00996
GO:GO:0006886 GO:GO:0004663 InterPro:IPR018203 PRINTS:PR00891
GeneTree:ENSGT00530000063044 GO:GO:0005968 InterPro:IPR016664
PIRSF:PIRSF016550 CTD:1122 OMA:FGNTPFL EMBL:DAAA02042806
IPI:IPI00905304 RefSeq:XP_002694003.1 RefSeq:XP_610836.1
Ensembl:ENSBTAT00000014310 GeneID:532324 KEGG:bta:532324
NextBio:20875663 Uniprot:F1N2I0
Length = 651
Score = 277 (102.6 bits), Expect = 9.1e-35, Sum P(2) = 9.1e-35
Identities = 77/245 (31%), Positives = 124/245 (50%)
Query: 116 RVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEK 175
++L+ +DL++KS S Y EFK++ + + K+ VP SRA +F K L ++EK
Sbjct: 231 KLLYSQGLLIDLLIKSNVSRYAEFKNV-TRILAFREGKVEQVPCSRADVFNSKELTMVEK 289
Query: 176 NQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMAD 235
LM+F L ++ E ++ F+E+L L ++ +L++IAM
Sbjct: 290 RMLMKFLTFC---LDYEQHPEEYQAFTQ----CSFSEYLKTKNLTPSLQHFILHSIAM-- 340
Query: 236 YDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCL 295
+SE T DG+ + +GRF N ++P+YGQGE+PQ FCR AV G +
Sbjct: 341 ----MSESSCTTVDGLKATKTFLQCLGRFGNT--PFLFPLYGQGEIPQCFCRMCAVFGGI 394
Query: 296 YVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSFTVPGSLASSHQQLQESFQA 355
Y LR V L+ D+ SG K + GQ I + +++ S+ + SS Q Q S +A
Sbjct: 395 YCLRHKVQCLVVDRESGRCKAIIDHLGQRINAKYFIVEDSY-LSEETCSSVQYKQIS-RA 452
Query: 356 FSLSD 360
++D
Sbjct: 453 VLITD 457
Score = 155 (59.6 bits), Expect = 9.1e-35, Sum P(2) = 9.1e-35
Identities = 30/60 (50%), Positives = 41/60 (68%)
Query: 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPS 80
T FD+IV+GTGLPES+++AA S SG+ VLHLD +YG +++S S L +L H S
Sbjct: 7 TEFDVIVMGTGLPESILAAACSRSGQRVLHLDSRSYYGGNWASFSFPGLLSWLKEHQQNS 66
>RGD|2340 [details] [associations]
symbol:Chm "choroideremia (Rab escort protein 1)" species:10116
"Rattus norvegicus" [GO:0001568 "blood vessel development"
evidence=IEA;ISO] [GO:0004663 "Rab geranylgeranyltransferase
activity" evidence=IEA] [GO:0005096 "GTPase activator activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005968
"Rab-protein geranylgeranyltransferase complex" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0017137 "Rab GTPase binding" evidence=IDA] InterPro:IPR001738
PRINTS:PR00893 Pfam:PF00996 RGD:2340 GO:GO:0006886 GO:GO:0005096
GO:GO:0043547 GO:GO:0001568 GO:GO:0017137 GO:GO:0004663
eggNOG:COG5044 InterPro:IPR018203 PRINTS:PR00891 GO:GO:0005968
PDB:1LTX PDBsum:1LTX PDB:1VG0 PDB:1VG9 PDBsum:1VG0 PDBsum:1VG9
InterPro:IPR016664 PIRSF:PIRSF016550 CTD:1121 HOVERGEN:HBG004961
OrthoDB:EOG441QBB HOGENOM:HOG000231282 EMBL:L13722 IPI:IPI00209504
PIR:A40686 RefSeq:NP_058763.1 UniGene:Rn.10191 DisProt:DP00458
ProteinModelPortal:P37727 SMR:P37727 IntAct:P37727 STRING:P37727
PhosphoSite:P37727 PRIDE:P37727 GeneID:24942 KEGG:rno:24942
UCSC:RGD:2340 InParanoid:P37727 EvolutionaryTrace:P37727
NextBio:604935 ArrayExpress:P37727 Genevestigator:P37727
GermOnline:ENSRNOG00000000161 Uniprot:P37727
Length = 650
Score = 278 (102.9 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 78/245 (31%), Positives = 122/245 (49%)
Query: 116 RVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEK 175
++L+ +DL++KS S Y EFK+I + + + VP SRA +F K L ++EK
Sbjct: 231 QLLYSRGLLIDLLIKSNVSRYAEFKNI-TRILAFREGTVEQVPCSRADVFNSKQLTMVEK 289
Query: 176 NQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMAD 235
LM+F + E + R E + F+E+L KL ++ VL++IAM
Sbjct: 290 RMLMKFLTFCVEY----EEHPDEYRAYE---GTTFSEYLKTQKLTPNLQYFVLHSIAMT- 341
Query: 236 YDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCL 295
SE T DG+ + +GR+ N ++P+YGQGELPQ FCR AV G +
Sbjct: 342 -----SETTSCTVDGLKATKKFLQCLGRYGNT--PFLFPLYGQGELPQCFCRMCAVFGGI 394
Query: 296 YVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSFTVPGSLASSHQQLQESFQA 355
Y LR V L+ D+ S K V GQ I+S +++ S+ + S Q ++ +A
Sbjct: 395 YCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYLSENTC--SRVQYRQISRA 452
Query: 356 FSLSD 360
++D
Sbjct: 453 VLITD 457
Score = 150 (57.9 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 29/60 (48%), Positives = 42/60 (70%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSV 82
FD+IVIGTGLPES+I+AA S SG+ VLH+D +YG +++S S + L +L + + V
Sbjct: 9 FDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLKEYQENNDV 68
>UNIPROTKB|P37727 [details] [associations]
symbol:Chm "Rab proteins geranylgeranyltransferase
component A 1" species:10116 "Rattus norvegicus" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0005968
"Rab-protein geranylgeranyltransferase complex" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
InterPro:IPR001738 PRINTS:PR00893 Pfam:PF00996 RGD:2340
GO:GO:0006886 GO:GO:0005096 GO:GO:0043547 GO:GO:0001568
GO:GO:0017137 GO:GO:0004663 eggNOG:COG5044 InterPro:IPR018203
PRINTS:PR00891 GO:GO:0005968 PDB:1LTX PDBsum:1LTX PDB:1VG0 PDB:1VG9
PDBsum:1VG0 PDBsum:1VG9 InterPro:IPR016664 PIRSF:PIRSF016550
CTD:1121 HOVERGEN:HBG004961 OrthoDB:EOG441QBB HOGENOM:HOG000231282
EMBL:L13722 IPI:IPI00209504 PIR:A40686 RefSeq:NP_058763.1
UniGene:Rn.10191 DisProt:DP00458 ProteinModelPortal:P37727
SMR:P37727 IntAct:P37727 STRING:P37727 PhosphoSite:P37727
PRIDE:P37727 GeneID:24942 KEGG:rno:24942 UCSC:RGD:2340
InParanoid:P37727 EvolutionaryTrace:P37727 NextBio:604935
ArrayExpress:P37727 Genevestigator:P37727
GermOnline:ENSRNOG00000000161 Uniprot:P37727
Length = 650
Score = 278 (102.9 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 78/245 (31%), Positives = 122/245 (49%)
Query: 116 RVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEK 175
++L+ +DL++KS S Y EFK+I + + + VP SRA +F K L ++EK
Sbjct: 231 QLLYSRGLLIDLLIKSNVSRYAEFKNI-TRILAFREGTVEQVPCSRADVFNSKQLTMVEK 289
Query: 176 NQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMAD 235
LM+F + E + R E + F+E+L KL ++ VL++IAM
Sbjct: 290 RMLMKFLTFCVEY----EEHPDEYRAYE---GTTFSEYLKTQKLTPNLQYFVLHSIAMT- 341
Query: 236 YDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCL 295
SE T DG+ + +GR+ N ++P+YGQGELPQ FCR AV G +
Sbjct: 342 -----SETTSCTVDGLKATKKFLQCLGRYGNT--PFLFPLYGQGELPQCFCRMCAVFGGI 394
Query: 296 YVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSFTVPGSLASSHQQLQESFQA 355
Y LR V L+ D+ S K V GQ I+S +++ S+ + S Q ++ +A
Sbjct: 395 YCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYLSENTC--SRVQYRQISRA 452
Query: 356 FSLSD 360
++D
Sbjct: 453 VLITD 457
Score = 150 (57.9 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 29/60 (48%), Positives = 42/60 (70%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSV 82
FD+IVIGTGLPES+I+AA S SG+ VLH+D +YG +++S S + L +L + + V
Sbjct: 9 FDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLKEYQENNDV 68
>UNIPROTKB|P26374 [details] [associations]
symbol:CHML "Rab proteins geranylgeranyltransferase
component A 2" species:9606 "Homo sapiens" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0005968
"Rab-protein geranylgeranyltransferase complex" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005096 "GTPase activator activity" evidence=IEA] [GO:0007601
"visual perception" evidence=TAS] InterPro:IPR001738 PRINTS:PR00893
Pfam:PF00996 GO:GO:0006886 GO:GO:0005096 GO:GO:0043547
GO:GO:0007601 EMBL:CH471098 GO:GO:0004663 eggNOG:COG5044
InterPro:IPR018203 PRINTS:PR00891 EMBL:AL133390 EMBL:AF482426
GO:GO:0005968 InterPro:IPR016664 PIRSF:PIRSF016550
HOVERGEN:HBG004961 OrthoDB:EOG441QBB HOGENOM:HOG000231282
EMBL:X64728 EMBL:AK314125 EMBL:BC117360 IPI:IPI00031587 PIR:S23754
RefSeq:NP_001812.2 UniGene:Hs.654545 ProteinModelPortal:P26374
SMR:P26374 IntAct:P26374 STRING:P26374 PhosphoSite:P26374
DMDM:47117837 PRIDE:P26374 Ensembl:ENST00000366553 GeneID:1122
KEGG:hsa:1122 UCSC:uc001hzd.3 CTD:1122 GeneCards:GC01M241792
HGNC:HGNC:1941 HPA:HPA029628 MIM:118825 neXtProt:NX_P26374
PharmGKB:PA26472 InParanoid:P26374 OMA:FGNTPFL GenomeRNAi:1122
NextBio:4658 Bgee:P26374 CleanEx:HS_CHML Genevestigator:P26374
GermOnline:ENSG00000203668 Uniprot:P26374
Length = 656
Score = 276 (102.2 bits), Expect = 4.6e-34, Sum P(2) = 4.6e-34
Identities = 75/245 (30%), Positives = 123/245 (50%)
Query: 116 RVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEK 175
++L+ +DL++KS S Y+EFK++ + + K+ VP SRA +F K L ++EK
Sbjct: 236 KLLYSQGLLIDLLIKSDVSRYVEFKNV-TRILAFREGKVEQVPCSRADVFNSKELTMVEK 294
Query: 176 NQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMAD 235
LM+F L ++ + + F+E+L KL ++ VL++IAM
Sbjct: 295 RMLMKFLTFC---LEYEQHPDEYQAFRQ----CSFSEYLKTKKLTPNLQHFVLHSIAMT- 346
Query: 236 YDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCL 295
SE T DG+N + +GRF N ++P+YGQGE+PQ FCR AV G +
Sbjct: 347 -----SESSCTTIDGLNATKNFLQCLGRFGNT--PFLFPLYGQGEIPQGFCRMCAVFGGI 399
Query: 296 YVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSFTVPGSLASSHQQLQESFQA 355
Y LR V + D+ SG K + GQ I + +++ S+ S+ Q ++ +A
Sbjct: 400 YCLRHKVQCFVVDKESGRCKAIIDHFGQRINAKYFIVEDSYL--SEETCSNVQYKQISRA 457
Query: 356 FSLSD 360
++D
Sbjct: 458 VLITD 462
Score = 150 (57.9 bits), Expect = 4.6e-34, Sum P(2) = 4.6e-34
Identities = 26/62 (41%), Positives = 43/62 (69%)
Query: 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPS 80
T FD+++IGTGLPES+++AA S SG+ VLH+D +YG +++S S + L +L + +
Sbjct: 7 TEFDVVIIGTGLPESILAAACSRSGQRVLHIDSRSYYGGNWASFSFSGLLSWLKEYQQNN 66
Query: 81 SV 82
+
Sbjct: 67 DI 68
>UNIPROTKB|F1NEX6 [details] [associations]
symbol:CHM "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=IEA] [GO:0005968 "Rab-protein geranylgeranyltransferase
complex" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] InterPro:IPR001738 PRINTS:PR00893
Pfam:PF00996 GO:GO:0006886 GO:GO:0004663 InterPro:IPR018203
PRINTS:PR00891 GeneTree:ENSGT00530000063044 GO:GO:0005968
InterPro:IPR016664 PIRSF:PIRSF016550 EMBL:AADN02013429
IPI:IPI00578233 Ensembl:ENSGALT00000039704 ArrayExpress:F1NEX6
Uniprot:F1NEX6
Length = 656
Score = 277 (102.6 bits), Expect = 2.2e-33, Sum P(2) = 2.2e-33
Identities = 73/222 (32%), Positives = 119/222 (53%)
Query: 116 RVLFCADHAVDLMLKSGASHYLEFKSIDATFMLD-ADAKLCSVPDSRAAIFKDKSLGLME 174
++L+ ++L++KS S Y EFK+ AT +L + K+ VP SRA +F + L ++E
Sbjct: 230 KLLYSRGLLIELLIKSNVSRYAEFKN--ATRILAFREGKVEQVPCSRADVFNSRQLAMVE 287
Query: 175 KNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMA 234
K LM+F L ++ + ++ +S FA+FL KL ++ +L++IAM
Sbjct: 288 KRMLMKFLTFC---LEYEQHPDEY----QDYKNSTFAQFLKTRKLTPSLQHFILHSIAM- 339
Query: 235 DYDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGC 294
VSE T +G+ + +GR+ N ++P+YGQGE+PQ FCR AV G
Sbjct: 340 -----VSEKDCNTLEGLQATRKFLQCLGRYGNT--PFLFPLYGQGEIPQCFCRMCAVFGG 392
Query: 295 LYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSF 336
+Y LR V L+ D+ SG K V GQ I ++ +++ S+
Sbjct: 393 IYCLRHSVQCLVVDKESGRCKAVVDHFGQRISANYFIVEDSY 434
Score = 142 (55.0 bits), Expect = 2.2e-33, Sum P(2) = 2.2e-33
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSV 82
FD++VIGTGLPES+I+AA + SG+ VLH+D +YG +++S S + L ++ + + +
Sbjct: 9 FDVVVIGTGLPESIIAAACARSGQRVLHVDSRNYYGGNWASFSFSGLLSWIKENQQNTDI 68
Query: 83 ---CPD 85
C D
Sbjct: 69 KDECED 74
>UNIPROTKB|F1S9E9 [details] [associations]
symbol:CHML "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005968 "Rab-protein geranylgeranyltransferase complex"
evidence=IEA] [GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=IEA] InterPro:IPR001738 PRINTS:PR00893 Pfam:PF00996
GO:GO:0006886 GO:GO:0004663 InterPro:IPR018203 PRINTS:PR00891
GeneTree:ENSGT00530000063044 GO:GO:0005968 InterPro:IPR016664
PIRSF:PIRSF016550 OMA:FGNTPFL EMBL:FP236746
Ensembl:ENSSSCT00000011865 Uniprot:F1S9E9
Length = 649
Score = 277 (102.6 bits), Expect = 7.7e-32, Sum P(2) = 7.7e-32
Identities = 73/221 (33%), Positives = 115/221 (52%)
Query: 116 RVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEK 175
++L+ +DL++KS S Y EFK++ + + K+ VP SRA +F K+L ++EK
Sbjct: 229 KLLYSQGLLIDLLIKSNVSRYAEFKNV-TRILAFREGKVEQVPCSRADVFNSKALTMVEK 287
Query: 176 NQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMAD 235
LM+F LD E + ++ + F+E+L KL ++ VL++IAM
Sbjct: 288 RMLMKFLTFC-----LDY--ERHPDEYQDFMQCSFSEYLKAKKLTPSLQHFVLHSIAMT- 339
Query: 236 YDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCL 295
SE T DG+ + +GRF N ++P+YGQGE+PQ FCR AV G +
Sbjct: 340 -----SESSCTTIDGLKATKNFLQCLGRFGNT--PFLFPLYGQGEVPQCFCRMCAVFGGI 392
Query: 296 YVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSF 336
Y LR V L+ D+ SG K + GQ I + +++ S+
Sbjct: 393 YCLRHKVQCLVVDKESGRCKAIIDHLGQRISATYFIVEDSY 433
Score = 127 (49.8 bits), Expect = 7.7e-32, Sum P(2) = 7.7e-32
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPS 80
T D+I G GLPES+++AA S SG+ VLHLD +YG +++S S + L ++ + S
Sbjct: 6 TTTDVINSGPGLPESILAAACSRSGRRVLHLDSRSYYGGNWASFSFSGLLSWVKEYQQSS 65
>TAIR|locus:2144741 [details] [associations]
symbol:GDI "RAB GDP-dissociation inhibitor" species:3702
"Arabidopsis thaliana" [GO:0005093 "Rab GDP-dissociation inhibitor
activity" evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0015031 "protein transport" evidence=IEA;ISS] [GO:0048046
"apoplast" evidence=IDA] [GO:0006499 "N-terminal protein
myristoylation" evidence=RCA] InterPro:IPR000806 PRINTS:PR00892
Pfam:PF00996 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0048046
GO:GO:0015031 EMBL:AL353994 eggNOG:COG5044 HOGENOM:HOG000163825
GO:GO:0005093 InterPro:IPR018203 PRINTS:PR00891 OMA:YKRMMGS
HSSP:P21856 ProtClustDB:CLSN2683185 IPI:IPI00548702 PIR:T49943
RefSeq:NP_196517.3 UniGene:At.32492 ProteinModelPortal:Q9LXC0
SMR:Q9LXC0 STRING:Q9LXC0 PaxDb:Q9LXC0 PRIDE:Q9LXC0
EnsemblPlants:AT5G09550.1 GeneID:830814 KEGG:ath:AT5G09550
TAIR:At5g09550 InParanoid:Q9LXC0 PhylomeDB:Q9LXC0
Genevestigator:Q9LXC0 Uniprot:Q9LXC0
Length = 445
Score = 254 (94.5 bits), Expect = 9.5e-32, Sum P(3) = 9.5e-32
Identities = 70/231 (30%), Positives = 112/231 (48%)
Query: 106 RNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIF 165
R +N+D+ P+ + V ++ + + YL FK++D +F+ K+ VP +
Sbjct: 69 REYNVDMI-PKFIMANGLLVQTLIHTDVTKYLNFKAVDGSFVYKK-GKIYKVPATDVEAL 126
Query: 166 KDKSLGLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKS 225
K +GL EK + +FF VQ + D + +S+ E ++K L
Sbjct: 127 KSPLMGLFEKRRARKFFIYVQDYDEKDPKSHEGLDLSKVTA----REIISKYGLEDDTID 182
Query: 226 IVLYAIAMADYDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAF 285
+ +A+A+ + D + + + D + R+ LY S+ RFQ IYP+YG GELPQAF
Sbjct: 183 FIGHALALHNDDDYLDQPAI---DFVKRIKLYAESLARFQGG-SPYIYPLYGLGELPQAF 238
Query: 286 CRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSF 336
R +AV G Y+L P + D SG GV A G+ K+V DPS+
Sbjct: 239 ARLSAVYGGTYMLNKPECKVEFD-GSGKAIGVTSA-GETAKCKKVVCDPSY 287
Score = 124 (48.7 bits), Expect = 9.5e-32, Sum P(3) = 9.5e-32
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTP 79
+D+IV+GTGL E ++S S G VLH+D N +YG SSL++ L TP
Sbjct: 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLTQLWKRFRGSDTP 61
Score = 56 (24.8 bits), Expect = 9.5e-32, Sum P(3) = 9.5e-32
Identities = 15/48 (31%), Positives = 22/48 (45%)
Query: 363 GKVARGICITRSSLKP--DLSNFLVIFPPRC---KIDSWYFCLCYAED 405
GKV R +CI + D + +I P + K D + FC YA +
Sbjct: 296 GKVTRAVCIMSHPIPDTNDAHSVQIILPQKQLGRKSDMYLFCCSYAHN 343
>WB|WBGene00022051 [details] [associations]
symbol:rep-1 species:6239 "Caenorhabditis elegans"
[GO:0005093 "Rab GDP-dissociation inhibitor activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR000806
PRINTS:PR00892 Pfam:PF00996 GO:GO:0015031 EMBL:FO081642
GO:GO:0005093 InterPro:IPR018203 PRINTS:PR00891
GeneTree:ENSGT00530000063044 InterPro:IPR016664 PIRSF:PIRSF016550
HSSP:P37727 GeneID:175311 KEGG:cel:CELE_Y67D2.1 CTD:175311
RefSeq:NP_001022928.1 ProteinModelPortal:Q9BKQ5 SMR:Q9BKQ5
STRING:Q9BKQ5 PRIDE:Q9BKQ5 EnsemblMetazoa:Y67D2.1a.1
EnsemblMetazoa:Y67D2.1a.2 UCSC:Y67D2.1b.1 WormBase:Y67D2.1a
HOGENOM:HOG000020554 InParanoid:Q9BKQ5 OMA:INCRHVI NextBio:887612
ArrayExpress:Q9BKQ5 Uniprot:Q9BKQ5
Length = 510
Score = 263 (97.6 bits), Expect = 3.6e-30, Sum P(2) = 3.6e-30
Identities = 82/279 (29%), Positives = 137/279 (49%)
Query: 106 RNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDA----TFMLDADAKLCSVPDSR 161
R F++D+ P++L V + S SHY EFK ++ T +A L VP S+
Sbjct: 122 RRFSIDLV-PKILLSKGAMVQTLCDSQVSHYAEFKLVNRQLCPTETPEAGITLNPVPCSK 180
Query: 162 AAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPH 221
IF+ +L ++EK LM+F S ++EE ++ E D PF+EFL +M +
Sbjct: 181 GEIFQSNALSILEKRALMKFITFCT-QWSTKDTEEGR-KLLAEHADRPFSEFLEQMGVGK 238
Query: 222 KIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGEL 281
++S ++ I + Q + G+ + S+G F + ++P+YG GEL
Sbjct: 239 TLQSFIINTIGILQ--QRPTAMT-----GMLASCQFMDSVGHFGPS--PFLFPLYGCGEL 289
Query: 282 PQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSFTVPGS 341
Q FCR AAV G LY L PV +++ + G V +A+G + +V+ P F VP +
Sbjct: 290 SQCFCRLAAVFGSLYCLGRPVQAIV--KKDGKITAV-IANGDRVNCRYIVMSPRF-VPET 345
Query: 342 L-ASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPD 379
+ ASS +++ A S + + + + +SL+PD
Sbjct: 346 VPASSTLKIERIVYATDKSIKEAEKEQLTLLNLASLRPD 384
Score = 127 (49.8 bits), Expect = 3.6e-30, Sum P(2) = 3.6e-30
Identities = 22/48 (45%), Positives = 38/48 (79%)
Query: 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTH 71
D++V+GTGLPE+++++A + +G SVLHLD N +YG +SS +++ + H
Sbjct: 10 DVVVLGTGLPEAILASACARAGLSVLHLDRNEYYGGDWSSFTMS-MVH 56
>UNIPROTKB|K7GL59 [details] [associations]
symbol:CHM "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005968 "Rab-protein geranylgeranyltransferase complex"
evidence=IEA] [GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=IEA] InterPro:IPR001738 PRINTS:PR00893 Pfam:PF00996
InterPro:IPR018203 PRINTS:PR00891 GeneTree:ENSGT00530000063044
InterPro:IPR016664 PIRSF:PIRSF016550 EMBL:FP102371 EMBL:FP236348
EMBL:FP340307 Ensembl:ENSSSCT00000034355 Uniprot:K7GL59
Length = 614
Score = 237 (88.5 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 62/180 (34%), Positives = 92/180 (51%)
Query: 157 VPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTK 216
VP SRA +F K L ++EK LM+F + E + + EE F+E+L
Sbjct: 235 VPCSRADVFNSKQLTMVEKRMLMKFLTFCMDY----EEYPDEYKAYEE---ISFSEYLKT 287
Query: 217 MKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIY 276
KL ++ VL++IAM SE T DG+ + +GR+ N ++P+Y
Sbjct: 288 QKLTPNLQYFVLHSIAMT------SETASSTIDGLKATQNFLHCLGRYGNT--PFLFPLY 339
Query: 277 GQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSF 336
GQGELPQ FCR AV G +Y LR V L+ D+ SG K + GQ I++ +++ S+
Sbjct: 340 GQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESGKCKAIIDHFGQRIIAKHFIVEDSY 399
Score = 159 (61.0 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 30/60 (50%), Positives = 43/60 (71%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSV 82
FD+IVIGTGLPES+I+AA S SG+ VLH+D +YG +++S S + L +L H S++
Sbjct: 9 FDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLKEHQENSNI 68
>DICTYBASE|DDB_G0268034 [details] [associations]
symbol:DDB_G0268034 "Rab GDP dissociation inhibitor
alpha" species:44689 "Dictyostelium discoideum" [GO:0015031
"protein transport" evidence=IEA] [GO:0005093 "Rab GDP-dissociation
inhibitor activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000806 PRINTS:PR00892 dictyBase:DDB_G0268034
Pfam:PF00996 GO:GO:0015031 EMBL:AAFI02000003 eggNOG:COG5044
OMA:FGLDKNT GO:GO:0005093 InterPro:IPR018203 PRINTS:PR00891
RefSeq:XP_647506.1 ProteinModelPortal:Q55FM7 SMR:Q55FM7
STRING:Q55FM7 EnsemblProtists:DDB0232225 GeneID:8616313
KEGG:ddi:DDB_G0268034 InParanoid:Q55FM7 ProtClustDB:PTZ00363
Uniprot:Q55FM7
Length = 454
Score = 253 (94.1 bits), Expect = 1.4e-29, Sum P(3) = 1.4e-29
Identities = 63/232 (27%), Positives = 122/232 (52%)
Query: 106 RNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIF 165
R++N+D+ P+ + + V ++L + + YL+FK +D +++ + K+ VP +
Sbjct: 70 RDYNVDLI-PKFILSSGLLVKMLLHTDVTRYLDFKVVDGSYVYSS-GKINKVPSTDTEAL 127
Query: 166 KDKSLGLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKS 225
+GL++K L +FF VQ + + + + + + +D+ F ++ L I
Sbjct: 128 TSSLVGLLDKLPLRKFFIFVQNYEENNPATHDGLNLKITTMDALFKKY----GLRENIVD 183
Query: 226 IVLYAIAMADYDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAF 285
+ +A+A+ D + + D I R+ LY S+ R+ + IYP+YG GELPQAF
Sbjct: 184 FIGHALALYLDDSYLQQ---PAHDTIMRMKLYADSLARYSKS--PYIYPLYGLGELPQAF 238
Query: 286 CRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLAS-GQDILSHKLVLDPSF 336
R +A+ G Y+L P+ +++ D+ K +++ S G+ + K+V DPS+
Sbjct: 239 ARLSAIYGGTYMLNKPIENIVFDEEK---KIIKVTSEGETVTCDKIVCDPSY 287
Score = 122 (48.0 bits), Expect = 1.4e-29, Sum P(3) = 1.4e-29
Identities = 28/67 (41%), Positives = 38/67 (56%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSV 82
+D+IV+GTGL E +IS S GK VLH+D N +YG +SL++ L SH
Sbjct: 5 YDVIVLGTGLKECIISGLLSVDGKKVLHMDRNGYYGGESASLNMNQLWE--KSHGKEKKA 62
Query: 83 CPDPLYS 89
P+ L S
Sbjct: 63 -PETLGS 68
Score = 40 (19.1 bits), Expect = 1.4e-29, Sum P(3) = 1.4e-29
Identities = 7/10 (70%), Positives = 8/10 (80%)
Query: 362 KGKVARGICI 371
KGK+ R ICI
Sbjct: 295 KGKIIRSICI 304
>ZFIN|ZDB-GENE-050522-504 [details] [associations]
symbol:gdi1 "GDP dissociation inhibitor 1"
species:7955 "Danio rerio" [GO:0005093 "Rab GDP-dissociation
inhibitor activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR000806 PRINTS:PR00892 Pfam:PF00996
ZFIN:ZDB-GENE-050522-504 GO:GO:0015031 GO:GO:0005093
InterPro:IPR018203 PRINTS:PR00891 CTD:2664 HOVERGEN:HBG000839
EMBL:BC095329 IPI:IPI00617551 RefSeq:NP_001018444.1
UniGene:Dr.18113 ProteinModelPortal:Q503H2 SMR:Q503H2 PRIDE:Q503H2
GeneID:554985 KEGG:dre:554985 InParanoid:Q503H2 NextBio:20880819
ArrayExpress:Q503H2 Bgee:Q503H2 Uniprot:Q503H2
Length = 447
Score = 249 (92.7 bits), Expect = 3.9e-29, Sum P(2) = 3.9e-29
Identities = 71/261 (27%), Positives = 128/261 (49%)
Query: 80 SSVCP-DPLYSDVEISNYASRLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLE 138
SS+ P + LY IS+ + + R++N+D+ P+ L V ++L + + YL+
Sbjct: 44 SSITPLEELYKRFGISDSPPESMGRG-RDWNVDLI-PKFLMANGQLVKMLLYTEVTRYLD 101
Query: 139 FKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENN 198
FK ++ +F+ K+ VP + +G+ EK + +F V + DE++
Sbjct: 102 FKVVEGSFVYKG-GKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVA---NFDENDPKT 157
Query: 199 VRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYN 258
+ L + E K L + +A+A+ D + + L+T INR+ LY+
Sbjct: 158 FEGVDPKLTT-MGEVYKKFDLGQDVIDFTGHALALYRTDDYLEQPCLET---INRIKLYS 213
Query: 259 SSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVR 318
S+ R+ + +YP+YG GELPQ F R +A+ G Y+L PV ++ + G GV+
Sbjct: 214 ESLARYGKS--PYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDEIVME--GGHVVGVK 269
Query: 319 LASGQDILSHKLVLDPSFTVP 339
+ G+ +L+ DPS+ +P
Sbjct: 270 -SEGEVARCKQLICDPSY-IP 288
Score = 132 (51.5 bits), Expect = 3.9e-29, Sum P(2) = 3.9e-29
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS-IADL-THFLNSHSTPS 80
+D+IV+GTGL E ++S S +GK VLH+D NP+YG SS++ + +L F S S P
Sbjct: 5 YDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFGISDSPPE 64
Query: 81 SV 82
S+
Sbjct: 65 SM 66
>UNIPROTKB|F1MS24 [details] [associations]
symbol:CHM "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0001568 "blood vessel development" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005968 "Rab-protein geranylgeranyltransferase complex"
evidence=IEA] [GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=IEA] InterPro:IPR001738 PRINTS:PR00893 Pfam:PF00996
GO:GO:0006886 GO:GO:0001568 GO:GO:0004663 InterPro:IPR018203
PRINTS:PR00891 GeneTree:ENSGT00530000063044 GO:GO:0005968
InterPro:IPR016664 PIRSF:PIRSF016550 OMA:GEKENHC EMBL:DAAA02072319
EMBL:DAAA02072320 IPI:IPI01000038 Ensembl:ENSBTAT00000012631
Uniprot:F1MS24
Length = 614
Score = 298 (110.0 bits), Expect = 2.0e-28, Sum P(2) = 2.0e-28
Identities = 79/245 (32%), Positives = 126/245 (51%)
Query: 116 RVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEK 175
++L+ +DL++KS S Y EFK+I + + ++ VP SRA +F K L ++EK
Sbjct: 195 KLLYSRGLLIDLLIKSNVSRYAEFKNI-TRILAFREGRVKQVPCSRADVFNSKQLTMVEK 253
Query: 176 NQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMAD 235
LM+F + E + + EE F+E+L KL ++ VL+++AM
Sbjct: 254 RMLMKFLTFCMEY----EEHPDEYKAYEE---ITFSEYLKTQKLTPNLQYFVLHSMAMT- 305
Query: 236 YDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCL 295
SE T DG+ + S+GR+ N ++P+YGQGELPQ FCR AV G +
Sbjct: 306 -----SETGSSTIDGLKATKNFLHSLGRYGNT--PFLFPLYGQGELPQCFCRMCAVFGGI 358
Query: 296 YVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSFTVPGSLASSHQQLQESFQA 355
Y LR V L+ D+ SG K + GQ I+S +++ S+ + A H Q ++ +A
Sbjct: 359 YCLRHSVQCLVVDKESGKCKAIIDQYGQRIISKHFLVEDSYLSENTCA--HVQYRQISRA 416
Query: 356 FSLSD 360
++D
Sbjct: 417 ILITD 421
Score = 49 (22.3 bits), Expect = 2.0e-28, Sum P(2) = 2.0e-28
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 56 FYGSHFSSLSIADLTHFLNSHSTPSSV---CP 84
+YG +++S S + L +L H S + CP
Sbjct: 3 YYGGNWASFSFSGLLSWLKEHQENSDIVNECP 34
>UNIPROTKB|P21856 [details] [associations]
symbol:GDI1 "Rab GDP dissociation inhibitor alpha"
species:9913 "Bos taurus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=ISS] [GO:0005093 "Rab GDP-dissociation
inhibitor activity" evidence=ISS;IDA] [GO:0050771 "negative
regulation of axonogenesis" evidence=ISS] [GO:0005829 "cytosol"
evidence=IDA] [GO:0030496 "midbody" evidence=IEA] [GO:0005096
"GTPase activator activity" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000806 PRINTS:PR00892 InterPro:IPR016040
Pfam:PF00996 GO:GO:0005829 GO:GO:0007264 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005096 GO:GO:0043547 GO:GO:0015031
GO:GO:0030496 GO:GO:0050771 eggNOG:COG5044 HOGENOM:HOG000163825
OMA:FGLDKNT GO:GO:0005093 InterPro:IPR018203 PRINTS:PR00891
GeneTree:ENSGT00530000063044 EMBL:D90103 EMBL:BC123440
IPI:IPI00698594 PIR:A35652 RefSeq:NP_776489.1 UniGene:Bt.2235
PDB:1D5T PDB:1GND PDB:1LV0 PDBsum:1D5T PDBsum:1GND PDBsum:1LV0
ProteinModelPortal:P21856 SMR:P21856 DIP:DIP-82N STRING:P21856
PRIDE:P21856 Ensembl:ENSBTAT00000016093 GeneID:281188
KEGG:bta:281188 CTD:2664 HOVERGEN:HBG000839 InParanoid:P21856
OrthoDB:EOG4H19VS EvolutionaryTrace:P21856 NextBio:20805245
Uniprot:P21856
Length = 447
Score = 247 (92.0 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
Identities = 69/272 (25%), Positives = 133/272 (48%)
Query: 80 SSVCP-DPLYSDVEISNYASRLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLE 138
SS+ P + LY ++ + + R++N+D+ P+ L V ++L + + YL+
Sbjct: 44 SSITPLEELYKRFQLLEGPPETMGRG-RDWNVDLI-PKFLMANGQLVKMLLYTEVTRYLD 101
Query: 139 FKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENN 198
FK ++ +F+ K+ VP + +G+ EK + +F V + DE++
Sbjct: 102 FKVVEGSFVYKG-GKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVA---NFDENDPKT 157
Query: 199 VRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYN 258
+ ++ + K L + +A+A+ D + + L+T INR+ LY+
Sbjct: 158 FE-GVDPQNTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLET---INRIKLYS 213
Query: 259 SSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVR 318
S+ R+ + +YP+YG GELPQ F R +A+ G Y+L PV ++ + +G GV+
Sbjct: 214 ESLARYGKS--PYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIME--NGKVVGVK 269
Query: 319 LASGQDILSHKLVLDPSFTVPGSLASSHQQLQ 350
+ G+ +L+ DPS+ VP + + Q ++
Sbjct: 270 -SEGEVARCKQLICDPSY-VPDRVRKAGQVIR 299
Score = 127 (49.8 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
Identities = 22/43 (51%), Positives = 32/43 (74%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS 65
+D+IV+GTGL E ++S S +GK VLH+D NP+YG SS++
Sbjct: 5 YDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSIT 47
>MGI|MGI:99846 [details] [associations]
symbol:Gdi1 "guanosine diphosphate (GDP) dissociation
inhibitor 1" species:10090 "Mus musculus" [GO:0005093 "Rab
GDP-dissociation inhibitor activity" evidence=ISO] [GO:0005096
"GTPase activator activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0017137 "Rab GTPase binding" evidence=ISO] [GO:0030496
"midbody" evidence=ISO] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0050771 "negative regulation of axonogenesis" evidence=ISO]
[GO:0051592 "response to calcium ion" evidence=ISO]
InterPro:IPR000806 PRINTS:PR00892 InterPro:IPR016040 MGI:MGI:99846
Pfam:PF00996 GO:GO:0005737 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0005096 GO:GO:0043547 GO:GO:0015031 GO:GO:0030496
GO:GO:0050771 EMBL:AL807376 eggNOG:COG5044 GO:GO:0005093
InterPro:IPR018203 PRINTS:PR00891 GeneTree:ENSGT00530000063044
CTD:2664 HOVERGEN:HBG000839 OrthoDB:EOG4H19VS EMBL:AF251042
EMBL:AF441240 EMBL:AK028880 EMBL:AK156224 EMBL:AK171216
EMBL:BC010220 EMBL:BC013758 EMBL:BC037598 EMBL:U07950
IPI:IPI00323179 PIR:C56024 RefSeq:NP_034403.1 UniGene:Mm.205830
ProteinModelPortal:P50396 SMR:P50396 IntAct:P50396
MINT:MINT-1869124 STRING:P50396 PhosphoSite:P50396 PaxDb:P50396
PRIDE:P50396 Ensembl:ENSMUST00000015435 GeneID:14567 KEGG:mmu:14567
UCSC:uc009tom.2 InParanoid:P50396 NextBio:286278 Bgee:P50396
Genevestigator:P50396 GermOnline:ENSMUSG00000015291 Uniprot:P50396
Length = 447
Score = 247 (92.0 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
Identities = 69/272 (25%), Positives = 133/272 (48%)
Query: 80 SSVCP-DPLYSDVEISNYASRLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLE 138
SS+ P + LY +I + + R++N+D+ P+ L V ++L + + YL+
Sbjct: 44 SSITPLEELYKRFQILEGPPESMGRG-RDWNVDLI-PKFLMANGQLVKMLLYTEVTRYLD 101
Query: 139 FKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENN 198
FK ++ +F+ K+ VP + +G+ EK + +F V + DE++
Sbjct: 102 FKVVEGSFVYKG-GKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVA---NFDENDPKT 157
Query: 199 VRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYN 258
+ ++ + K L + +A+A+ D + + L+T INR+ LY+
Sbjct: 158 FE-GVDPQNTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLET---INRIKLYS 213
Query: 259 SSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVR 318
S+ R+ + +YP+YG GELPQ F R +A+ G Y+L PV ++ + +G GV+
Sbjct: 214 ESLARYGKS--PYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIME--NGKVVGVK 269
Query: 319 LASGQDILSHKLVLDPSFTVPGSLASSHQQLQ 350
+ G+ +L+ DPS+ +P + + Q ++
Sbjct: 270 -SEGEVARCKQLICDPSY-IPDRVQKAGQVIR 299
Score = 127 (49.8 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
Identities = 22/43 (51%), Positives = 32/43 (74%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS 65
+D+IV+GTGL E ++S S +GK VLH+D NP+YG SS++
Sbjct: 5 YDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSIT 47
>UNIPROTKB|I3L893 [details] [associations]
symbol:GDI1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030496 "midbody" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005093 "Rab GDP-dissociation inhibitor activity" evidence=IEA]
InterPro:IPR000806 PRINTS:PR00892 Pfam:PF00996 GO:GO:0005737
GO:GO:0015031 GO:GO:0030496 OMA:FGLDKNT GO:GO:0005093
InterPro:IPR018203 PRINTS:PR00891 GeneTree:ENSGT00530000063044
EMBL:FP326695 RefSeq:XP_003360570.1 Ensembl:ENSSSCT00000027724
GeneID:100623607 KEGG:ssc:100623607 Uniprot:I3L893
Length = 447
Score = 246 (91.7 bits), Expect = 3.3e-28, Sum P(2) = 3.3e-28
Identities = 69/272 (25%), Positives = 132/272 (48%)
Query: 80 SSVCP-DPLYSDVEISNYASRLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLE 138
SS+ P + LY ++ + + R++N+D+ P+ L V ++L + + YL+
Sbjct: 44 SSITPLEELYKRFQLLEGPPEAMGRG-RDWNVDLI-PKFLMANGQLVKMLLYTEVTRYLD 101
Query: 139 FKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENN 198
FK ++ +F+ K+ VP + +G+ EK + +F V + DE++
Sbjct: 102 FKVVEGSFVYKG-GKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVA---NFDENDPKT 157
Query: 199 VRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYN 258
+ + + K L + +A+A+ D + + L+T INR+ LY+
Sbjct: 158 FE-GVDPQSTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLET---INRIKLYS 213
Query: 259 SSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVR 318
S+ R+ + +YP+YG GELPQ F R +A+ G Y+L PV ++ + +G GV+
Sbjct: 214 ESLARYGKS--PYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIME--NGKVVGVK 269
Query: 319 LASGQDILSHKLVLDPSFTVPGSLASSHQQLQ 350
+ G+ +L+ DPS+ VP + + Q ++
Sbjct: 270 -SEGEVARCKQLICDPSY-VPDRVRKAGQVIR 299
Score = 127 (49.8 bits), Expect = 3.3e-28, Sum P(2) = 3.3e-28
Identities = 22/43 (51%), Positives = 32/43 (74%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS 65
+D+IV+GTGL E ++S S +GK VLH+D NP+YG SS++
Sbjct: 5 YDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSIT 47
>UNIPROTKB|F1PWQ0 [details] [associations]
symbol:GDI1 "Rab GDP dissociation inhibitor alpha"
species:9615 "Canis lupus familiaris" [GO:0015031 "protein
transport" evidence=IEA] [GO:0005093 "Rab GDP-dissociation
inhibitor activity" evidence=IEA] InterPro:IPR000806 PRINTS:PR00892
Pfam:PF00996 GO:GO:0015031 GO:GO:0005093 InterPro:IPR018203
PRINTS:PR00891 GeneTree:ENSGT00560000076899 EMBL:AAEX03027091
Ensembl:ENSCAFT00000031130 Uniprot:F1PWQ0
Length = 447
Score = 245 (91.3 bits), Expect = 4.5e-28, Sum P(2) = 4.5e-28
Identities = 68/272 (25%), Positives = 132/272 (48%)
Query: 80 SSVCP-DPLYSDVEISNYASRLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLE 138
SS+ P + LY ++ + + R++N+D+ P+ L V ++L + + YL+
Sbjct: 44 SSITPLEELYKRFQLLEGPPEAMGRG-RDWNVDLI-PKFLMANGQLVKMLLYTEVTRYLD 101
Query: 139 FKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENN 198
FK ++ +F+ K+ VP + +G+ EK + +F V + DE++
Sbjct: 102 FKVVEGSFVYKG-GKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVA---NFDENDPKT 157
Query: 199 VRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYN 258
+ + + K L + +A+A+ D + + L+T INR+ LY+
Sbjct: 158 FE-GVDPQSTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLET---INRIKLYS 213
Query: 259 SSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVR 318
S+ R+ + +YP+YG GELPQ F R +A+ G Y+L PV ++ + +G GV+
Sbjct: 214 ESLARYGKS--PYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIME--NGKVVGVK 269
Query: 319 LASGQDILSHKLVLDPSFTVPGSLASSHQQLQ 350
+ G+ +L+ DPS+ +P + + Q ++
Sbjct: 270 -SEGEVARCKQLICDPSY-IPDRVRKAGQVIR 299
Score = 127 (49.8 bits), Expect = 4.5e-28, Sum P(2) = 4.5e-28
Identities = 22/43 (51%), Positives = 32/43 (74%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS 65
+D+IV+GTGL E ++S S +GK VLH+D NP+YG SS++
Sbjct: 5 YDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSIT 47
>UNIPROTKB|O97555 [details] [associations]
symbol:GDI1 "Rab GDP dissociation inhibitor alpha"
species:9615 "Canis lupus familiaris" [GO:0050771 "negative
regulation of axonogenesis" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005096 "GTPase activator activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005093 "Rab
GDP-dissociation inhibitor activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000806
PRINTS:PR00892 InterPro:IPR016040 Pfam:PF00996 GO:GO:0005737
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005096 GO:GO:0043547
GO:GO:0015031 GO:GO:0050771 eggNOG:COG5044 HOGENOM:HOG000163825
GO:GO:0005093 InterPro:IPR018203 PRINTS:PR00891 CTD:2664
HOVERGEN:HBG000839 OrthoDB:EOG4H19VS EMBL:AF027360
RefSeq:NP_001003185.1 UniGene:Cfa.11322 ProteinModelPortal:O97555
SMR:O97555 PRIDE:O97555 GeneID:403819 KEGG:cfa:403819
InParanoid:O97555 NextBio:20817315 Uniprot:O97555
Length = 447
Score = 245 (91.3 bits), Expect = 4.5e-28, Sum P(2) = 4.5e-28
Identities = 68/272 (25%), Positives = 132/272 (48%)
Query: 80 SSVCP-DPLYSDVEISNYASRLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLE 138
SS+ P + LY ++ + + R++N+D+ P+ L V ++L + + YL+
Sbjct: 44 SSITPLEELYKRFQLLEGPPEAMGRG-RDWNVDLI-PKFLMANGQLVKMLLYTEVTRYLD 101
Query: 139 FKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENN 198
FK ++ +F+ K+ VP + +G+ EK + +F V + DE++
Sbjct: 102 FKVVEGSFIYKG-GKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVA---NFDENDPKT 157
Query: 199 VRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYN 258
+ + + K L + +A+A+ D + + L+T INR+ LY+
Sbjct: 158 FE-GVDPQSTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLET---INRIKLYS 213
Query: 259 SSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVR 318
S+ R+ + +YP+YG GELPQ F R +A+ G Y+L PV ++ + +G GV+
Sbjct: 214 ESLARYGKS--PYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIME--NGKVVGVK 269
Query: 319 LASGQDILSHKLVLDPSFTVPGSLASSHQQLQ 350
+ G+ +L+ DPS+ +P + + Q ++
Sbjct: 270 -SEGEVARCKQLICDPSY-IPDRVRKAGQVIR 299
Score = 127 (49.8 bits), Expect = 4.5e-28, Sum P(2) = 4.5e-28
Identities = 22/43 (51%), Positives = 32/43 (74%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS 65
+D+IV+GTGL E ++S S +GK VLH+D NP+YG SS++
Sbjct: 5 YDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSIT 47
>UNIPROTKB|Q7YQM0 [details] [associations]
symbol:GDI1 "Rab GDP dissociation inhibitor alpha"
species:9600 "Pongo pygmaeus" [GO:0050771 "negative regulation of
axonogenesis" evidence=ISS] InterPro:IPR000806 PRINTS:PR00892
InterPro:IPR016040 Pfam:PF00996 GO:GO:0005737 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005096 GO:GO:0043547 GO:GO:0015031
GO:GO:0050771 eggNOG:COG5044 HOGENOM:HOG000163825 GO:GO:0005093
InterPro:IPR018203 PRINTS:PR00891 HOVERGEN:HBG000839 EMBL:AB102649
EMBL:CR860458 EMBL:CR860770 EMBL:CR926033 UniGene:Pab.18408
ProteinModelPortal:Q7YQM0 SMR:Q7YQM0 PRIDE:Q7YQM0 InParanoid:Q7YQM0
Uniprot:Q7YQM0
Length = 447
Score = 244 (91.0 bits), Expect = 6.3e-28, Sum P(2) = 6.3e-28
Identities = 69/272 (25%), Positives = 132/272 (48%)
Query: 80 SSVCP-DPLYSDVEISNYASRLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLE 138
SS+ P + LY ++ + + R++N+D+ P+ L V ++L + + YL+
Sbjct: 44 SSITPLEELYKRFQLLEGPPESMGRG-RDWNVDLI-PKFLMANGQLVKMLLYTEVTRYLD 101
Query: 139 FKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENN 198
FK ++ +F+ K+ VP + +G+ EK + +F V + DE++
Sbjct: 102 FKVVEGSFVYKG-GKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVA---NFDENDPKT 157
Query: 199 VRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYN 258
+ S + K L + +A+A+ D + + L+T INR+ LY+
Sbjct: 158 FEGVDPQTTS-MRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLET---INRIKLYS 213
Query: 259 SSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVR 318
S+ R+ + +YP+YG GELPQ F R +A+ G Y+L PV ++ + +G GV+
Sbjct: 214 ESLARYGKS--PYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIME--NGKVVGVK 269
Query: 319 LASGQDILSHKLVLDPSFTVPGSLASSHQQLQ 350
+ G+ +L+ DPS+ +P + + Q ++
Sbjct: 270 -SEGEVARCKQLICDPSY-IPDRVRKAGQVIR 299
Score = 127 (49.8 bits), Expect = 6.3e-28, Sum P(2) = 6.3e-28
Identities = 22/43 (51%), Positives = 32/43 (74%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS 65
+D+IV+GTGL E ++S S +GK VLH+D NP+YG SS++
Sbjct: 5 YDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSIT 47
>UNIPROTKB|Q8HXX7 [details] [associations]
symbol:GDI1 "Rab GDP dissociation inhibitor alpha"
species:9541 "Macaca fascicularis" [GO:0050771 "negative regulation
of axonogenesis" evidence=ISS] InterPro:IPR000806 PRINTS:PR00892
InterPro:IPR016040 Pfam:PF00996 GO:GO:0005737 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005096 GO:GO:0043547 GO:GO:0015031
GO:GO:0050771 GO:GO:0005093 InterPro:IPR018203 PRINTS:PR00891
HOVERGEN:HBG000839 OrthoDB:EOG4H19VS EMBL:AB083312 EMBL:AB169658
ProteinModelPortal:Q8HXX7 SMR:Q8HXX7 PRIDE:Q8HXX7 Uniprot:Q8HXX7
Length = 447
Score = 244 (91.0 bits), Expect = 6.3e-28, Sum P(2) = 6.3e-28
Identities = 69/272 (25%), Positives = 132/272 (48%)
Query: 80 SSVCP-DPLYSDVEISNYASRLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLE 138
SS+ P + LY ++ + + R++N+D+ P+ L V ++L + + YL+
Sbjct: 44 SSITPLEELYKRFQLLEGPPESMGRG-RDWNVDLI-PKFLMANGQLVKMLLYTEVTRYLD 101
Query: 139 FKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENN 198
FK ++ +F+ K+ VP + +G+ EK + +F V + DE++
Sbjct: 102 FKVVEGSFVYKG-GKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVA---NFDENDPKT 157
Query: 199 VRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYN 258
+ S + K L + +A+A+ D + + L+T INR+ LY+
Sbjct: 158 FEGVDPQTTS-MRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLET---INRIKLYS 213
Query: 259 SSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVR 318
S+ R+ + +YP+YG GELPQ F R +A+ G Y+L PV ++ + +G GV+
Sbjct: 214 ESLARYGKS--PYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIME--NGKVVGVK 269
Query: 319 LASGQDILSHKLVLDPSFTVPGSLASSHQQLQ 350
+ G+ +L+ DPS+ +P + + Q ++
Sbjct: 270 -SEGEVARCKQLICDPSY-IPDRVRKAGQVIR 299
Score = 127 (49.8 bits), Expect = 6.3e-28, Sum P(2) = 6.3e-28
Identities = 22/43 (51%), Positives = 32/43 (74%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS 65
+D+IV+GTGL E ++S S +GK VLH+D NP+YG SS++
Sbjct: 5 YDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSIT 47
>RGD|2676 [details] [associations]
symbol:Gdi1 "GDP dissociation inhibitor 1" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005093 "Rab GDP-dissociation inhibitor activity" evidence=IDA]
[GO:0005096 "GTPase activator activity" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0017137 "Rab GTPase binding" evidence=IPI] [GO:0030496 "midbody"
evidence=IEA;ISO] [GO:0043005 "neuron projection" evidence=IDA]
[GO:0043234 "protein complex" evidence=IDA] [GO:0050771 "negative
regulation of axonogenesis" evidence=IDA] [GO:0051592 "response to
calcium ion" evidence=IDA] InterPro:IPR000806 PRINTS:PR00892
InterPro:IPR016040 Pfam:PF00996 RGD:2676 GO:GO:0005737 GO:GO:0043234
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0051592 GO:GO:0005096
GO:GO:0043547 GO:GO:0015031 GO:GO:0043005 GO:GO:0030496 GO:GO:0050771
eggNOG:COG5044 HOGENOM:HOG000163825 OMA:FGLDKNT GO:GO:0005093
InterPro:IPR018203 PRINTS:PR00891 GeneTree:ENSGT00530000063044
CTD:2664 HOVERGEN:HBG000839 OrthoDB:EOG4H19VS EMBL:X74402 EMBL:U07952
EMBL:BC099763 EMBL:AF130987 IPI:IPI00324986 PIR:A54091 PIR:B56024
RefSeq:NP_058784.2 UniGene:Rn.4000 ProteinModelPortal:P50398
SMR:P50398 STRING:P50398 PhosphoSite:P50398 World-2DPAGE:0004:P50398
PRIDE:P50398 Ensembl:ENSRNOT00000056295 GeneID:25183 KEGG:rno:25183
InParanoid:P50398 NextBio:605677 Genevestigator:P50398
GermOnline:ENSRNOG00000037245 Uniprot:P50398
Length = 447
Score = 244 (91.0 bits), Expect = 6.3e-28, Sum P(2) = 6.3e-28
Identities = 69/272 (25%), Positives = 132/272 (48%)
Query: 80 SSVCP-DPLYSDVEISNYASRLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLE 138
SS+ P + LY ++ + + R++N+D+ P+ L V ++L + + YL+
Sbjct: 44 SSITPLEELYKRFQLLEGPPESMGRG-RDWNVDLI-PKFLMANGQLVKMLLYTEVTRYLD 101
Query: 139 FKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENN 198
FK ++ +F+ K+ VP + +G+ EK + +F V + DE++
Sbjct: 102 FKVVEGSFVYKG-GKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVA---NFDENDPKT 157
Query: 199 VRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYN 258
+ S + K L + +A+A+ D + + L+T INR+ LY+
Sbjct: 158 FEGVDPQTTS-MRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLET---INRIKLYS 213
Query: 259 SSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVR 318
S+ R+ + +YP+YG GELPQ F R +A+ G Y+L PV ++ + +G GV+
Sbjct: 214 ESLARYGKS--PYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIME--NGKVVGVK 269
Query: 319 LASGQDILSHKLVLDPSFTVPGSLASSHQQLQ 350
+ G+ +L+ DPS+ +P + + Q ++
Sbjct: 270 -SEGEVARCKQLICDPSY-IPDRVRKAGQVIR 299
Score = 127 (49.8 bits), Expect = 6.3e-28, Sum P(2) = 6.3e-28
Identities = 22/43 (51%), Positives = 32/43 (74%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS 65
+D+IV+GTGL E ++S S +GK VLH+D NP+YG SS++
Sbjct: 5 YDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSIT 47
>UNIPROTKB|P31150 [details] [associations]
symbol:GDI1 "Rab GDP dissociation inhibitor alpha"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0005096 "GTPase activator activity" evidence=IEA]
[GO:0005093 "Rab GDP-dissociation inhibitor activity" evidence=IEA]
[GO:0017137 "Rab GTPase binding" evidence=IEA] [GO:0043005 "neuron
projection" evidence=IEA] [GO:0043234 "protein complex"
evidence=IEA] [GO:0051592 "response to calcium ion" evidence=IEA]
[GO:0030496 "midbody" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0050771 "negative regulation of axonogenesis"
evidence=ISS] [GO:0005092 "GDP-dissociation inhibitor activity"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0007264 "small GTPase
mediated signal transduction" evidence=TAS] [GO:0051056 "regulation
of small GTPase mediated signal transduction" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR000806
PRINTS:PR00892 Pfam:PF00996 GO:GO:0005829 Reactome:REACT_111102
GO:GO:0007264 GO:GO:0005096 GO:GO:0043547
Pathway_Interaction_DB:p38alphabetadownstreampathway GO:GO:0015031
GO:GO:0051056 Orphanet:777 GO:GO:0030496 GO:GO:0050771
EMBL:CH471172 EMBL:L44140 GO:GO:0005092 eggNOG:COG5044 OMA:FGLDKNT
GO:GO:0005093 InterPro:IPR018203 PRINTS:PR00891 CTD:2664
HOVERGEN:HBG000839 OrthoDB:EOG4H19VS EMBL:X79353 EMBL:X79354
EMBL:X79355 EMBL:X79356 EMBL:X79357 EMBL:X79358 EMBL:X79359
EMBL:X79360 EMBL:X79364 EMBL:X79361 EMBL:X79362 EMBL:X79363
EMBL:D45021 EMBL:AF400433 EMBL:AB101741 EMBL:AB101742 EMBL:AB101743
EMBL:AB101744 EMBL:AB101745 EMBL:AB101746 EMBL:AB101747
EMBL:AB101748 EMBL:AB101749 EMBL:AB101750 EMBL:AB101751
EMBL:AB101752 EMBL:AB101753 EMBL:AB101754 EMBL:AB101755
EMBL:AB101756 EMBL:AB101757 EMBL:AB101758 EMBL:AB101759
EMBL:AB101760 EMBL:AB101771 EMBL:AB101772 EMBL:AB101773
EMBL:AB101774 EMBL:AB101775 EMBL:AB101776 EMBL:AB101777
EMBL:AB101778 EMBL:AB101779 EMBL:AB101780 EMBL:AB101781
EMBL:AB101782 EMBL:AB101783 EMBL:AB101784 EMBL:AB101785
EMBL:AB101786 EMBL:AB101787 EMBL:AB101788 EMBL:AB101789
EMBL:AB101790 EMBL:AB101801 EMBL:AB101802 EMBL:AB101803
EMBL:AB101804 EMBL:AB101805 EMBL:AB101806 EMBL:AB101807
EMBL:AB101808 EMBL:AB101809 EMBL:AB101810 EMBL:AB101811
EMBL:AB101812 EMBL:AB101813 EMBL:AB101814 EMBL:AB101815
EMBL:AB101816 EMBL:AB101817 EMBL:AB101818 EMBL:AB101819
EMBL:AB101820 EMBL:AB101831 EMBL:AB101832 EMBL:AB101833
EMBL:AB101834 EMBL:AB101835 EMBL:AB101836 EMBL:AB101837
EMBL:AB101838 EMBL:AB101839 EMBL:AB101840 EMBL:AB101841
EMBL:AB101842 EMBL:AB101843 EMBL:AB101844 EMBL:AB101845
EMBL:AB101846 EMBL:AB101847 EMBL:AB101848 EMBL:AB101849
EMBL:AB101850 EMBL:AB102647 EMBL:CR542258 EMBL:CR542276
EMBL:BT019884 EMBL:BX936385 EMBL:BC000317 EMBL:BC012201 EMBL:U14623
EMBL:L05086 IPI:IPI00010154 PIR:I37082 RefSeq:NP_001484.1
UniGene:Hs.595950 UniGene:Hs.74576 ProteinModelPortal:P31150
SMR:P31150 IntAct:P31150 MINT:MINT-2859157 STRING:P31150
PhosphoSite:P31150 DMDM:1707886 OGP:P31150
REPRODUCTION-2DPAGE:IPI00010154 UCD-2DPAGE:P31150 PaxDb:P31150
PeptideAtlas:P31150 PRIDE:P31150 DNASU:2664 Ensembl:ENST00000447750
GeneID:2664 KEGG:hsa:2664 UCSC:uc004fli.4 GeneCards:GC0XP153665
H-InvDB:HIX0056464 HGNC:HGNC:4226 HPA:CAB012979 HPA:HPA049290
MIM:300104 MIM:300849 neXtProt:NX_P31150 PharmGKB:PA28641
InParanoid:P31150 ChiTaRS:GDI1 GenomeRNAi:2664 NextBio:10512
ArrayExpress:P31150 Bgee:P31150 CleanEx:HS_GDI1
Genevestigator:P31150 GermOnline:ENSG00000203879 Uniprot:P31150
Length = 447
Score = 243 (90.6 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
Identities = 68/272 (25%), Positives = 132/272 (48%)
Query: 80 SSVCP-DPLYSDVEISNYASRLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLE 138
SS+ P + LY ++ + + R++N+D+ P+ L V ++L + + YL+
Sbjct: 44 SSITPLEELYKRFQLLEGPPESMGRG-RDWNVDLI-PKFLMANGQLVKMLLYTEVTRYLD 101
Query: 139 FKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENN 198
FK ++ +F+ K+ VP + +G+ EK + +F V + DE++
Sbjct: 102 FKVVEGSFVYKG-GKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVA---NFDENDPKT 157
Query: 199 VRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYN 258
+ S + K L + +A+A+ D + + L+T +NR+ LY+
Sbjct: 158 FEGVDPQTTS-MRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLET---VNRIKLYS 213
Query: 259 SSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVR 318
S+ R+ + +YP+YG GELPQ F R +A+ G Y+L PV ++ + +G GV+
Sbjct: 214 ESLARYGKS--PYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIME--NGKVVGVK 269
Query: 319 LASGQDILSHKLVLDPSFTVPGSLASSHQQLQ 350
+ G+ +L+ DPS+ +P + + Q ++
Sbjct: 270 -SEGEVARCKQLICDPSY-IPDRVRKAGQVIR 299
Score = 127 (49.8 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
Identities = 22/43 (51%), Positives = 32/43 (74%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS 65
+D+IV+GTGL E ++S S +GK VLH+D NP+YG SS++
Sbjct: 5 YDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSIT 47
>UNIPROTKB|P60028 [details] [associations]
symbol:GDI1 "Rab GDP dissociation inhibitor alpha"
species:9598 "Pan troglodytes" [GO:0050771 "negative regulation of
axonogenesis" evidence=ISS] InterPro:IPR000806 PRINTS:PR00892
Pfam:PF00996 GO:GO:0005737 GO:GO:0005096 GO:GO:0043547
GO:GO:0015031 GO:GO:0030496 GO:GO:0050771 eggNOG:COG5044
HOGENOM:HOG000163825 OMA:FGLDKNT GO:GO:0005093 InterPro:IPR018203
PRINTS:PR00891 GeneTree:ENSGT00530000063044 CTD:2664
HOVERGEN:HBG000839 OrthoDB:EOG4H19VS EMBL:AB102648 EMBL:AY665281
EMBL:AB222141 RefSeq:NP_001009061.1 UniGene:Ptr.2611
ProteinModelPortal:P60028 SMR:P60028 PRIDE:P60028
Ensembl:ENSPTRT00000054842 GeneID:450155 KEGG:ptr:450155
InParanoid:P60028 NextBio:20833114 Uniprot:P60028
Length = 447
Score = 243 (90.6 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
Identities = 68/272 (25%), Positives = 132/272 (48%)
Query: 80 SSVCP-DPLYSDVEISNYASRLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLE 138
SS+ P + LY ++ + + R++N+D+ P+ L V ++L + + YL+
Sbjct: 44 SSITPLEELYKRFQLLEGPPESMGRG-RDWNVDLI-PKFLMANGQLVKMLLYTEVTRYLD 101
Query: 139 FKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENN 198
FK ++ +F+ K+ VP + +G+ EK + +F V + DE++
Sbjct: 102 FKVVEGSFVYKG-GKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVA---NFDENDPKT 157
Query: 199 VRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYN 258
+ S + K L + +A+A+ D + + L+T +NR+ LY+
Sbjct: 158 FEGVDPQTTS-MRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLET---VNRIKLYS 213
Query: 259 SSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVR 318
S+ R+ + +YP+YG GELPQ F R +A+ G Y+L PV ++ + +G GV+
Sbjct: 214 ESLARYGKS--PYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIME--NGKVVGVK 269
Query: 319 LASGQDILSHKLVLDPSFTVPGSLASSHQQLQ 350
+ G+ +L+ DPS+ +P + + Q ++
Sbjct: 270 -SEGEVARCKQLICDPSY-IPDRVRKAGQVIR 299
Score = 127 (49.8 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
Identities = 22/43 (51%), Positives = 32/43 (74%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS 65
+D+IV+GTGL E ++S S +GK VLH+D NP+YG SS++
Sbjct: 5 YDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSIT 47
>UNIPROTKB|J9P1V4 [details] [associations]
symbol:GDI1 "Rab GDP dissociation inhibitor alpha"
species:9615 "Canis lupus familiaris" [GO:0015031 "protein
transport" evidence=IEA] [GO:0005093 "Rab GDP-dissociation
inhibitor activity" evidence=IEA] InterPro:IPR000806 PRINTS:PR00892
Pfam:PF00996 GO:GO:0015031 GO:GO:0005093 InterPro:IPR018203
PRINTS:PR00891 InterPro:IPR013548 Pfam:PF08337
GeneTree:ENSGT00560000076899 EMBL:AAEX03027091
Ensembl:ENSCAFT00000044829 Uniprot:J9P1V4
Length = 500
Score = 245 (91.3 bits), Expect = 9.5e-28, Sum P(2) = 9.5e-28
Identities = 68/272 (25%), Positives = 132/272 (48%)
Query: 80 SSVCP-DPLYSDVEISNYASRLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLE 138
SS+ P + LY ++ + + R++N+D+ P+ L V ++L + + YL+
Sbjct: 44 SSITPLEELYKRFQLLEGPPEAMGRG-RDWNVDLI-PKFLMANGQLVKMLLYTEVTRYLD 101
Query: 139 FKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENN 198
FK ++ +F+ K+ VP + +G+ EK + +F V + DE++
Sbjct: 102 FKVVEGSFVYKG-GKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVA---NFDENDPKT 157
Query: 199 VRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYN 258
+ + + K L + +A+A+ D + + L+T INR+ LY+
Sbjct: 158 FE-GVDPQSTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLET---INRIKLYS 213
Query: 259 SSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVR 318
S+ R+ + +YP+YG GELPQ F R +A+ G Y+L PV ++ + +G GV+
Sbjct: 214 ESLARYGKS--PYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIME--NGKVVGVK 269
Query: 319 LASGQDILSHKLVLDPSFTVPGSLASSHQQLQ 350
+ G+ +L+ DPS+ +P + + Q ++
Sbjct: 270 -SEGEVARCKQLICDPSY-IPDRVRKAGQVIR 299
Score = 127 (49.8 bits), Expect = 9.5e-28, Sum P(2) = 9.5e-28
Identities = 22/43 (51%), Positives = 32/43 (74%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS 65
+D+IV+GTGL E ++S S +GK VLH+D NP+YG SS++
Sbjct: 5 YDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSIT 47
>UNIPROTKB|F1RUK8 [details] [associations]
symbol:GDI2 "Rab GDP dissociation inhibitor beta"
species:9823 "Sus scrofa" [GO:0009986 "cell surface" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005097 "Rab GTPase activator activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005093 "Rab
GDP-dissociation inhibitor activity" evidence=IEA]
InterPro:IPR000806 PRINTS:PR00892 Pfam:PF00996 GO:GO:0005794
GO:GO:0007264 GO:GO:0009986 GO:GO:0015031 GO:GO:0005097
GO:GO:0005093 InterPro:IPR018203 PRINTS:PR00891
GeneTree:ENSGT00530000063044 OMA:YKRMMGS EMBL:FP016185
Ensembl:ENSSSCT00000012189 ArrayExpress:F1RUK8 Uniprot:F1RUK8
Length = 445
Score = 235 (87.8 bits), Expect = 1.1e-27, Sum P(3) = 1.1e-27
Identities = 69/258 (26%), Positives = 123/258 (47%)
Query: 80 SSVCP-DPLYSDVEISNYASRLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLE 138
+S+ P + LY I + + R++N+D+ P+ L V ++L + + YL+
Sbjct: 44 ASITPLEDLYKRFNIPGAPPASMGRG-RDWNVDLI-PKFLMANGQLVKMLLFTEVTRYLD 101
Query: 139 FKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENN 198
FK + +F+ K+ VP + A +GL EK + +F V + DE++
Sbjct: 102 FKVTEGSFVYKG-GKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVA---NFDENDPRT 157
Query: 199 VRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYN 258
+ + E K L + +A+A+ D + + +T INR+ LY+
Sbjct: 158 FE-GVDPKKTAMREVYKKFDLGQDVIDFTGHALALYRTDDYLDQPCCET---INRIKLYS 213
Query: 259 SSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVR 318
S+ R+ + +YP+YG GELPQ F R +A+ G Y+L P+ ++ QN G GV+
Sbjct: 214 ESLARYGKS--PYLYPLYGLGELPQGFARLSAIYGGTYMLNKPIEEIIV-QN-GKVIGVK 269
Query: 319 LASGQDILSHKLVLDPSF 336
+ G+ +L+ DPS+
Sbjct: 270 -SEGEIARCKQLICDPSY 286
Score = 129 (50.5 bits), Expect = 1.1e-27, Sum P(3) = 1.1e-27
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS-IADLTHFLNSHSTP 79
+D+IV+GTGL E ++S S +GK VLH+D NP+YG +S++ + DL N P
Sbjct: 5 YDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESASITPLEDLYKRFNIPGAP 62
Score = 39 (18.8 bits), Expect = 1.1e-27, Sum P(3) = 1.1e-27
Identities = 13/51 (25%), Positives = 22/51 (43%)
Query: 340 GSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLK--PDLSNFLVIFP 388
G +A Q + + + G+V R ICI +K D ++ +I P
Sbjct: 272 GEIARCKQLICDPSYVKDRVEKVGQVIRVICILSHPIKNTSDANSCQIIIP 322
>UNIPROTKB|Q6Q7J2 [details] [associations]
symbol:GDI2 "Rab GDP dissociation inhibitor beta"
species:9823 "Sus scrofa" [GO:0016020 "membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005096 "GTPase activator
activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005093 "Rab GDP-dissociation inhibitor activity"
evidence=IEA] InterPro:IPR000806 PRINTS:PR00892 Pfam:PF00996
GO:GO:0005737 GO:GO:0016020 GO:GO:0005096 GO:GO:0043547
GO:GO:0015031 eggNOG:COG5044 HOGENOM:HOG000163825 GO:GO:0005093
InterPro:IPR018203 PRINTS:PR00891 HOVERGEN:HBG000839
OrthoDB:EOG4H19VS CTD:2665 EMBL:AY553929 RefSeq:NP_001001643.1
UniGene:Ssc.8440 ProteinModelPortal:Q6Q7J2 SMR:Q6Q7J2 STRING:Q6Q7J2
PRIDE:Q6Q7J2 GeneID:414427 KEGG:ssc:414427 Uniprot:Q6Q7J2
Length = 445
Score = 235 (87.8 bits), Expect = 1.1e-27, Sum P(3) = 1.1e-27
Identities = 69/258 (26%), Positives = 123/258 (47%)
Query: 80 SSVCP-DPLYSDVEISNYASRLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLE 138
+S+ P + LY I + + R++N+D+ P+ L V ++L + + YL+
Sbjct: 44 ASITPLEDLYKRFNIPGAPPASMGRG-RDWNVDLI-PKFLMANGQLVKMLLFTEVTRYLD 101
Query: 139 FKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENN 198
FK + +F+ K+ VP + A +GL EK + +F V + DE++
Sbjct: 102 FKVTEGSFVYKG-GKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVA---NFDENDPRT 157
Query: 199 VRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYN 258
+ + E K L + +A+A+ D + + +T INR+ LY+
Sbjct: 158 FE-GVDPKKTAMREVYKKFDLGQDVIDFTGHALALYRTDDYLDQPCCET---INRIKLYS 213
Query: 259 SSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVR 318
S+ R+ + +YP+YG GELPQ F R +A+ G Y+L P+ ++ QN G GV+
Sbjct: 214 ESLARYGKS--PYLYPLYGLGELPQGFARLSAIYGGTYMLNKPIEEIIV-QN-GKVIGVK 269
Query: 319 LASGQDILSHKLVLDPSF 336
+ G+ +L+ DPS+
Sbjct: 270 -SEGEIARCKQLICDPSY 286
Score = 129 (50.5 bits), Expect = 1.1e-27, Sum P(3) = 1.1e-27
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS-IADLTHFLNSHSTP 79
+D+IV+GTGL E ++S S +GK VLH+D NP+YG +S++ + DL N P
Sbjct: 5 YDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESASITPLEDLYKRFNIPGAP 62
Score = 39 (18.8 bits), Expect = 1.1e-27, Sum P(3) = 1.1e-27
Identities = 13/51 (25%), Positives = 22/51 (43%)
Query: 340 GSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLK--PDLSNFLVIFP 388
G +A Q + + + G+V R ICI +K D ++ +I P
Sbjct: 272 GEIARCKQLICDPSYVKDRVEKVGQVIRVICILSHPIKNTSDANSCQIIIP 322
>UNIPROTKB|P50395 [details] [associations]
symbol:GDI2 "Rab GDP dissociation inhibitor beta"
species:9606 "Homo sapiens" [GO:0005093 "Rab GDP-dissociation
inhibitor activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005097 "Rab GTPase activator activity"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0009986 "cell surface"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=TAS] [GO:0007264
"small GTPase mediated signal transduction" evidence=TAS]
[GO:0051056 "regulation of small GTPase mediated signal
transduction" evidence=TAS] InterPro:IPR000806 PRINTS:PR00892
Pfam:PF00996 GO:GO:0005829 GO:GO:0005794 Reactome:REACT_111102
GO:GO:0007264 GO:GO:0009986 GO:GO:0016020 GO:GO:0015031
GO:GO:0051056 GO:GO:0005097 eggNOG:COG5044 HOGENOM:HOG000163825
GO:GO:0005093 InterPro:IPR018203 PRINTS:PR00891 HOVERGEN:HBG000839
OrthoDB:EOG4H19VS HPA:HPA049290 CTD:2665 EMBL:D13988 EMBL:Y13286
EMBL:Y13287 EMBL:Y13288 EMBL:Y13289 EMBL:Y13290 EMBL:Y13291
EMBL:Y13292 EMBL:Y13293 EMBL:Y13294 EMBL:Y13295 EMBL:Y13296
EMBL:Y13297 EMBL:BT006868 EMBL:AK297554 EMBL:AL596094 EMBL:BC005145
EMBL:AF144713 IPI:IPI00640006 IPI:IPI00940148 RefSeq:NP_001108628.1
RefSeq:NP_001485.2 UniGene:Hs.299055 ProteinModelPortal:P50395
SMR:P50395 DIP:DIP-50593N IntAct:P50395 STRING:P50395
PhosphoSite:P50395 DMDM:13638228 OGP:P50395
REPRODUCTION-2DPAGE:IPI00031461 REPRODUCTION-2DPAGE:P50395
PaxDb:P50395 PRIDE:P50395 DNASU:2665 Ensembl:ENST00000380181
Ensembl:ENST00000380191 GeneID:2665 KEGG:hsa:2665 UCSC:uc001iil.4
GeneCards:GC10M005807 HGNC:HGNC:4227 MIM:600767 neXtProt:NX_P50395
PharmGKB:PA28642 InParanoid:P50395 PhylomeDB:P50395 ChiTaRS:GDI2
GenomeRNAi:2665 NextBio:10516 ArrayExpress:P50395 Bgee:P50395
CleanEx:HS_GDI2 Genevestigator:P50395 GermOnline:ENSG00000057608
Uniprot:P50395
Length = 445
Score = 233 (87.1 bits), Expect = 2.8e-27, Sum P(3) = 2.8e-27
Identities = 68/258 (26%), Positives = 123/258 (47%)
Query: 80 SSVCP-DPLYSDVEISNYASRLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLE 138
+S+ P + LY +I + + R++N+D+ P+ L V ++L + + YL+
Sbjct: 44 ASITPLEDLYKRFKIPGSPPESMGRG-RDWNVDLI-PKFLMANGQLVKMLLYTEVTRYLD 101
Query: 139 FKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENN 198
FK + +F+ K+ VP + A +GL EK + +F V + DE +
Sbjct: 102 FKVTEGSFVYKG-GKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVA---NFDEKDPRT 157
Query: 199 VRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYN 258
+ + + K L + +A+A+ D + + +T INR+ LY+
Sbjct: 158 FE-GIDPKKTTMRDVYKKFDLGQDVIDFTGHALALYRTDDYLDQPCYET---INRIKLYS 213
Query: 259 SSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVR 318
S+ R+ + +YP+YG GELPQ F R +A+ G Y+L P+ ++ QN G GV+
Sbjct: 214 ESLARYGKS--PYLYPLYGLGELPQGFARLSAIYGGTYMLNKPIEEIIV-QN-GKVIGVK 269
Query: 319 LASGQDILSHKLVLDPSF 336
+ G+ +L+ DPS+
Sbjct: 270 -SEGEIARCKQLICDPSY 286
Score = 129 (50.5 bits), Expect = 2.8e-27, Sum P(3) = 2.8e-27
Identities = 27/62 (43%), Positives = 40/62 (64%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS-IADL-THFLNSHSTPS 80
+D+IV+GTGL E ++S S +GK VLH+D NP+YG +S++ + DL F S P
Sbjct: 5 YDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESASITPLEDLYKRFKIPGSPPE 64
Query: 81 SV 82
S+
Sbjct: 65 SM 66
Score = 38 (18.4 bits), Expect = 2.8e-27, Sum P(3) = 2.8e-27
Identities = 13/51 (25%), Positives = 22/51 (43%)
Query: 340 GSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKP--DLSNFLVIFP 388
G +A Q + + + G+V R ICI +K D ++ +I P
Sbjct: 272 GEIARCKQLICDPSYVKDRVEKVGQVIRVICILSHPIKNTNDANSCQIIIP 322
>UNIPROTKB|P50397 [details] [associations]
symbol:GDI2 "Rab GDP dissociation inhibitor beta"
species:9913 "Bos taurus" [GO:0016020 "membrane" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005097 "Rab GTPase activator
activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005093 "Rab GDP-dissociation inhibitor activity"
evidence=IEA] InterPro:IPR000806 PRINTS:PR00892 Pfam:PF00996
GO:GO:0005794 GO:GO:0007264 GO:GO:0009986 GO:GO:0016020
GO:GO:0015031 GO:GO:0005097 eggNOG:COG5044 HOGENOM:HOG000163825
GO:GO:0005093 InterPro:IPR018203 PRINTS:PR00891
GeneTree:ENSGT00530000063044 HOVERGEN:HBG000839 OrthoDB:EOG4H19VS
EMBL:U07951 EMBL:BT030504 EMBL:BC105197 IPI:IPI00713760 PIR:A56024
RefSeq:NP_001028934.1 UniGene:Bt.23028 ProteinModelPortal:P50397
SMR:P50397 STRING:P50397 PRIDE:P50397 Ensembl:ENSBTAT00000006992
GeneID:509832 KEGG:bta:509832 CTD:2665 InParanoid:P50397
OMA:YKRMMGS NextBio:20869154 Uniprot:P50397
Length = 445
Score = 234 (87.4 bits), Expect = 3.1e-27, Sum P(3) = 3.1e-27
Identities = 71/260 (27%), Positives = 125/260 (48%)
Query: 80 SSVCP-DPLYSDVEISNYASRLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLE 138
+S+ P + LY +I + + R++N+D+ P+ L V ++L + + YL+
Sbjct: 44 ASITPLEDLYKRFKIPGAPPASMGRG-RDWNVDLI-PKFLMANGQLVKMLLFTEVTRYLD 101
Query: 139 FKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENN 198
FK + +F+ K+ VP + A +GL EK + +F V +EN+
Sbjct: 102 FKVTEGSFVYKG-GKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVANF------DEND 154
Query: 199 VRISE--EDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLAL 256
R E + + E K L + +A+A+ D + + +T INR+ L
Sbjct: 155 PRTFEGIDPKKTSMREVYKKFDLGQDVIDFTGHALALYRTDDYLDQPCCET---INRIKL 211
Query: 257 YNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKG 316
Y+ S+ R+ + +YP+YG GELPQ F R +A+ G Y+L P+ ++ QN G G
Sbjct: 212 YSESLARYGKS--PYLYPLYGLGELPQGFARLSAIYGGTYMLNKPIEEIIM-QN-GKVIG 267
Query: 317 VRLASGQDILSHKLVLDPSF 336
V+ + G+ +L+ DPS+
Sbjct: 268 VK-SEGEIARCKQLICDPSY 286
Score = 127 (49.8 bits), Expect = 3.1e-27, Sum P(3) = 3.1e-27
Identities = 26/62 (41%), Positives = 41/62 (66%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS-IADL-THFLNSHSTPS 80
+D+IV+GTGL E ++S S +GK VLH+D NP+YG +S++ + DL F + P+
Sbjct: 5 YDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESASITPLEDLYKRFKIPGAPPA 64
Query: 81 SV 82
S+
Sbjct: 65 SM 66
Score = 38 (18.4 bits), Expect = 3.1e-27, Sum P(3) = 3.1e-27
Identities = 13/51 (25%), Positives = 22/51 (43%)
Query: 340 GSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKP--DLSNFLVIFP 388
G +A Q + + + G+V R ICI +K D ++ +I P
Sbjct: 272 GEIARCKQLICDPSYVKDRVEKVGQVIRVICILSHPIKNTNDANSCQIIIP 322
>UNIPROTKB|O97556 [details] [associations]
symbol:GDI2 "Rab GDP dissociation inhibitor beta"
species:9615 "Canis lupus familiaris" [GO:0016020 "membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005096
"GTPase activator activity" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005093 "Rab GDP-dissociation
inhibitor activity" evidence=IEA] InterPro:IPR000806 PRINTS:PR00892
Pfam:PF00996 GO:GO:0005737 GO:GO:0016020 GO:GO:0005096
GO:GO:0043547 GO:GO:0015031 eggNOG:COG5044 HOGENOM:HOG000163825
GO:GO:0005093 InterPro:IPR018203 PRINTS:PR00891 HOVERGEN:HBG000839
OrthoDB:EOG4H19VS CTD:2665 EMBL:AF027361 RefSeq:NP_001003184.1
UniGene:Cfa.3682 ProteinModelPortal:O97556 SMR:O97556 PRIDE:O97556
GeneID:403818 KEGG:cfa:403818 InParanoid:O97556 NextBio:20817314
Uniprot:O97556
Length = 445
Score = 239 (89.2 bits), Expect = 5.8e-27, Sum P(2) = 5.8e-27
Identities = 70/258 (27%), Positives = 123/258 (47%)
Query: 80 SSVCP-DPLYSDVEISNYASRLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLE 138
+S+ P + LY +I + + R++NLD+ P+ L V ++L + + YL+
Sbjct: 44 ASITPLEDLYKRFKIPGAPPASMGRG-RDWNLDLI-PKFLMANGQLVKMLLYTEVTRYLD 101
Query: 139 FKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENN 198
FK + +F+ K+ VP + A +GL EK + +F V + DE +
Sbjct: 102 FKVTEGSFVYKG-GKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVA---NFDEKDPRT 157
Query: 199 VRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYN 258
+ + E K L + +A+A+ D + + +T INR+ LY+
Sbjct: 158 FE-GIDPKKTAIGEVYKKFDLGQDVIDFTGHALALYRTDDYLDQPCCET---INRIKLYS 213
Query: 259 SSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVR 318
S+ R+ + +YP+YG GELPQ F R +A+ G Y+L P+ ++ QN G GV+
Sbjct: 214 ESLARYGKS--PYLYPLYGLGELPQGFARLSAIYGGTYMLNKPIEEIIV-QN-GKVIGVK 269
Query: 319 LASGQDILSHKLVLDPSF 336
+ G+ +L+ DPS+
Sbjct: 270 -SEGEVARCKQLICDPSY 286
Score = 124 (48.7 bits), Expect = 5.8e-27, Sum P(2) = 5.8e-27
Identities = 25/62 (40%), Positives = 41/62 (66%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS-IADL-THFLNSHSTPS 80
+D+IV+GTGL E ++S + +GK VLH+D NP+YG +S++ + DL F + P+
Sbjct: 5 YDVIVLGTGLTECILSGIMTVNGKKVLHMDRNPYYGGESASITPLEDLYKRFKIPGAPPA 64
Query: 81 SV 82
S+
Sbjct: 65 SM 66
>POMBASE|SPAC22H10.12c [details] [associations]
symbol:gdi1 "GDP dissociation inhibitor Gdi1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005093
"Rab GDP-dissociation inhibitor activity" evidence=ISO] [GO:0005096
"GTPase activator activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006886
"intracellular protein transport" evidence=IC] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IC] [GO:0016192
"vesicle-mediated transport" evidence=ISO] [GO:0032153 "cell
division site" evidence=IDA] [GO:0033554 "cellular response to
stress" evidence=IEP] InterPro:IPR000806 PRINTS:PR00892
PomBase:SPAC22H10.12c Pfam:PF00996 GO:GO:0005829 GO:GO:0006886
GO:GO:0007264 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0016192
GO:GO:0033554 GO:GO:0032153 GO:GO:0005096 GO:GO:0043547 PIR:T38215
RefSeq:NP_593749.1 ProteinModelPortal:Q10305 SMR:Q10305
STRING:Q10305 PRIDE:Q10305 EnsemblFungi:SPAC22H10.12c.1
GeneID:2541727 KEGG:spo:SPAC22H10.12c eggNOG:COG5044
HOGENOM:HOG000163825 OMA:FGLDKNT OrthoDB:EOG4XSPZC NextBio:20802818
GO:GO:0005093 InterPro:IPR018203 PRINTS:PR00891 Uniprot:Q10305
Length = 440
Score = 237 (88.5 bits), Expect = 5.9e-27, Sum P(2) = 5.9e-27
Identities = 65/232 (28%), Positives = 117/232 (50%)
Query: 106 RNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIF 165
R++ +D+ P+ L ++++ + + Y+EFK I +++ D ++ VP +
Sbjct: 69 RDWCVDLV-PKFLMANGDLTNILIYTDVTRYIEFKQIAGSYVY-RDGRIAKVPGNEMEAL 126
Query: 166 KDKSLGLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKS 225
K + L EK + +F + V + D S ++ I + ++S F +F L +
Sbjct: 127 KSPLMSLFEKRRAKKFLEWVNNYREDDPSTYKDINIDRDSMESVFKKF----GLQSGTQD 182
Query: 226 IVLYAIAMADYDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAF 285
+ +A+A+ D + + +TR+ R+ LY SSI +F + IYP+YG GELPQ F
Sbjct: 183 FIGHAMALYLDDAYLKKPARETRE---RILLYASSIAKFGKS--PYIYPLYGLGELPQGF 237
Query: 286 CRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL-DPSF 336
R +A+ G Y+L PV ++ + G GVR SG + K ++ DPS+
Sbjct: 238 ARLSAIYGGTYMLNQPVDEIVYGDD-GVAIGVR--SGDQVAKAKQIIGDPSY 286
Score = 126 (49.4 bits), Expect = 5.9e-27, Sum P(2) = 5.9e-27
Identities = 27/64 (42%), Positives = 38/64 (59%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADL-THFLNSHSTPSS 81
+D+IV+GTGL E V+S S GK VLH+D N +YG+ +SL++ L F P S
Sbjct: 5 YDVIVLGTGLTECVLSGLLSVDGKKVLHIDRNDYYGADSASLNLTQLYALFRPGEQRPES 64
Query: 82 VCPD 85
+ D
Sbjct: 65 LGRD 68
>MGI|MGI:99845 [details] [associations]
symbol:Gdi2 "guanosine diphosphate (GDP) dissociation
inhibitor 2" species:10090 "Mus musculus" [GO:0005093 "Rab
GDP-dissociation inhibitor activity" evidence=ISO] [GO:0005096
"GTPase activator activity" evidence=IEA] [GO:0005097 "Rab GTPase
activator activity" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IPI]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IPI] [GO:0009986 "cell surface" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0031267 "small GTPase binding" evidence=ISO]
InterPro:IPR000806 PRINTS:PR00892 MGI:MGI:99845 Pfam:PF00996
GO:GO:0005794 GO:GO:0007264 GO:GO:0009986 GO:GO:0016020
GO:GO:0015031 GO:GO:0005097 UniGene:Mm.153226 UniGene:Mm.221609
eggNOG:COG5044 HOGENOM:HOG000163825 GO:GO:0005093
InterPro:IPR018203 PRINTS:PR00891 GeneTree:ENSGT00530000063044
HOVERGEN:HBG000839 OrthoDB:EOG4H19VS PIR:A56024 CTD:2665
OMA:YKRMMGS EMBL:L36314 EMBL:AK007871 EMBL:AK078144 EMBL:AK079690
EMBL:AK090083 EMBL:AK143633 EMBL:AK149958 EMBL:AK152250
EMBL:AK153381 EMBL:AK159734 EMBL:AK166317 EMBL:AK169299
EMBL:BC055341 IPI:IPI00122565 IPI:IPI00416577 PIR:C56956
RefSeq:NP_032138.3 ProteinModelPortal:Q61598 SMR:Q61598
DIP:DIP-348N STRING:Q61598 PhosphoSite:Q61598
REPRODUCTION-2DPAGE:Q61598 PaxDb:Q61598 PRIDE:Q61598
Ensembl:ENSMUST00000059515 GeneID:14569 KEGG:mmu:14569
UCSC:uc011yvx.1 InParanoid:Q61598 NextBio:286282 Bgee:Q61598
Genevestigator:Q61598 GermOnline:ENSMUSG00000021218 Uniprot:Q61598
Length = 445
Score = 232 (86.7 bits), Expect = 6.1e-27, Sum P(3) = 6.1e-27
Identities = 66/258 (25%), Positives = 124/258 (48%)
Query: 80 SSVCP-DPLYSDVEISNYASRLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLE 138
+S+ P + LY ++ + + R++N+D+ P+ L V ++L + + Y++
Sbjct: 44 ASITPLEDLYKRFKLPGQPPASMGRG-RDWNVDLI-PKFLMANGQLVKMLLFTEVTRYMD 101
Query: 139 FKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENN 198
FK I+ +F+ K+ VP + A +GL EK + +F V + DE +
Sbjct: 102 FKVIEGSFVYKG-GKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVA---NFDEKDPRT 157
Query: 199 VRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYN 258
+ + + K L + +++A+ D + + +T INR+ LY+
Sbjct: 158 FE-GVDPKKTSMRDVYKKFDLGQDVIDFTGHSLALYRTDDYLDQPCCET---INRIKLYS 213
Query: 259 SSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVR 318
S+ R+ + +YP+YG GELPQ F R +A+ G Y+L P+ ++ QN G GV+
Sbjct: 214 ESLARYGKS--PYLYPLYGLGELPQGFARLSAIYGGTYMLNKPIEEIIV-QN-GKVVGVK 269
Query: 319 LASGQDILSHKLVLDPSF 336
+ G+ +L+ DPS+
Sbjct: 270 -SEGEIARCKQLICDPSY 286
Score = 127 (49.8 bits), Expect = 6.1e-27, Sum P(3) = 6.1e-27
Identities = 23/48 (47%), Positives = 35/48 (72%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS-IADL 69
+D+IV+GTGL E ++S S +GK VLH+D NP+YG +S++ + DL
Sbjct: 5 YDVIVLGTGLTECILSGIMSVNGKKVLHMDQNPYYGGESASITPLEDL 52
Score = 38 (18.4 bits), Expect = 6.1e-27, Sum P(3) = 6.1e-27
Identities = 13/51 (25%), Positives = 22/51 (43%)
Query: 340 GSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKP--DLSNFLVIFP 388
G +A Q + + + G+V R ICI +K D ++ +I P
Sbjct: 272 GEIARCKQLICDPSYVKDRVEKVGQVIRVICILSHPIKNTNDANSCQIIIP 322
>RGD|61802 [details] [associations]
symbol:Gdi2 "GDP dissociation inhibitor 2" species:10116 "Rattus
norvegicus" [GO:0005093 "Rab GDP-dissociation inhibitor activity"
evidence=IEA;IDA] [GO:0005096 "GTPase activator activity"
evidence=IEA] [GO:0005097 "Rab GTPase activator activity"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=ISO]
[GO:0005829 "cytosol" evidence=TAS] [GO:0007264 "small GTPase
mediated signal transduction" evidence=ISO] [GO:0009986 "cell
surface" evidence=ISO] [GO:0015031 "protein transport"
evidence=IEA;TAS] [GO:0016020 "membrane" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEP] [GO:0031267 "small GTPase
binding" evidence=IDA] InterPro:IPR000806 PRINTS:PR00892
Pfam:PF00996 RGD:61802 GO:GO:0005829 GO:GO:0016020 GO:GO:0016192
GO:GO:0005096 GO:GO:0043547 GO:GO:0015031 GO:GO:0031267
eggNOG:COG5044 HOGENOM:HOG000163825 GO:GO:0005093 InterPro:IPR018203
PRINTS:PR00891 GeneTree:ENSGT00530000063044 HOVERGEN:HBG000839
OrthoDB:EOG4H19VS CTD:2665 OMA:YKRMMGS EMBL:X74401 EMBL:BC061767
IPI:IPI00197568 PIR:B54091 RefSeq:NP_058972.2 UniGene:Rn.1441
ProteinModelPortal:P50399 SMR:P50399 STRING:P50399
PhosphoSite:P50399 PRIDE:P50399 Ensembl:ENSRNOT00000024952
GeneID:29662 KEGG:rno:29662 UCSC:RGD:61802 InParanoid:P50399
NextBio:609963 ArrayExpress:P50399 Genevestigator:P50399
GermOnline:ENSRNOG00000018091 Uniprot:P50399
Length = 445
Score = 232 (86.7 bits), Expect = 6.1e-27, Sum P(3) = 6.1e-27
Identities = 66/258 (25%), Positives = 124/258 (48%)
Query: 80 SSVCP-DPLYSDVEISNYASRLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLE 138
+S+ P + LY ++ + + R++N+D+ P+ L V ++L + + Y++
Sbjct: 44 ASITPLEDLYKRFKLPGQPPASMGRG-RDWNVDLI-PKFLMANGQLVKMLLFTEVTRYMD 101
Query: 139 FKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENN 198
FK I+ +F+ K+ VP + A +GL EK + +F V + DE +
Sbjct: 102 FKVIEGSFVYKG-GKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVA---NFDEKDPRT 157
Query: 199 VRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYN 258
+ + + K L + +++A+ D + + +T INR+ LY+
Sbjct: 158 FE-GVDPKKTSMRDVYKKFDLGQDVIDFTGHSLALYRTDDYLDQPCCET---INRIKLYS 213
Query: 259 SSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVR 318
S+ R+ + +YP+YG GELPQ F R +A+ G Y+L P+ ++ QN G GV+
Sbjct: 214 ESLARYGKS--PYLYPLYGLGELPQGFARLSAIYGGTYMLNKPIEEIIV-QN-GKVVGVK 269
Query: 319 LASGQDILSHKLVLDPSF 336
+ G+ +L+ DPS+
Sbjct: 270 -SEGEIARCKQLICDPSY 286
Score = 127 (49.8 bits), Expect = 6.1e-27, Sum P(3) = 6.1e-27
Identities = 23/48 (47%), Positives = 35/48 (72%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS-IADL 69
+D+IV+GTGL E ++S S +GK VLH+D NP+YG +S++ + DL
Sbjct: 5 YDVIVLGTGLTECILSGIMSVNGKKVLHMDQNPYYGGESASITPLEDL 52
Score = 38 (18.4 bits), Expect = 6.1e-27, Sum P(3) = 6.1e-27
Identities = 13/51 (25%), Positives = 22/51 (43%)
Query: 340 GSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKP--DLSNFLVIFP 388
G +A Q + + + G+V R ICI +K D ++ +I P
Sbjct: 272 GEIARCKQLICDPSYVKDRVEKVGQVIRVICILSHPIKNTNDANSCQIIIP 322
>TAIR|locus:2080527 [details] [associations]
symbol:GDI2 "RAB GDP dissociation inhibitor 2"
species:3702 "Arabidopsis thaliana" [GO:0005093 "Rab
GDP-dissociation inhibitor activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0015031 "protein transport"
evidence=IEA;ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0016192 "vesicle-mediated transport"
evidence=RCA] [GO:0016926 "protein desumoylation" evidence=RCA]
[GO:0042732 "D-xylose metabolic process" evidence=RCA] [GO:0050665
"hydrogen peroxide biosynthetic process" evidence=RCA] [GO:0051049
"regulation of transport" evidence=RCA] InterPro:IPR000806
PRINTS:PR00892 Pfam:PF00996 GO:GO:0005829 GO:GO:0009506
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0048046 GO:GO:0015031
EMBL:AL138647 eggNOG:COG5044 HOGENOM:HOG000163825 GO:GO:0005093
InterPro:IPR018203 PRINTS:PR00891 OMA:HPIANTG HSSP:P21856
EMBL:AY081269 EMBL:BT000011 EMBL:AB005560 EMBL:AJ001397
IPI:IPI00543328 PIR:T47816 RefSeq:NP_191551.1 UniGene:At.23961
ProteinModelPortal:O24653 SMR:O24653 IntAct:O24653 STRING:O24653
PaxDb:O24653 PRIDE:O24653 EnsemblPlants:AT3G59920.1 GeneID:825162
KEGG:ath:AT3G59920 TAIR:At3g59920 InParanoid:O24653
PhylomeDB:O24653 ProtClustDB:CLSN2683185 ArrayExpress:O24653
Genevestigator:O24653 Uniprot:O24653
Length = 444
Score = 247 (92.0 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 66/231 (28%), Positives = 111/231 (48%)
Query: 106 RNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIF 165
R++N+D+ P+ + V ++ + + YL FK++D +++ K+ VP +
Sbjct: 69 RDYNVDMM-PKFMMGNGKLVRTLIHTDVTKYLSFKAVDGSYVF-VKGKVQKVPATPMEAL 126
Query: 166 KDKSLGLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKS 225
K +G+ EK + +FF VQ + D + + ++ E + K L
Sbjct: 127 KSSLMGIFEKRRAGKFFSFVQEYDEKDPKTHDGMDLTRVTTK----ELIAKYGLDGNTID 182
Query: 226 IVLYAIAMADYDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAF 285
+ +A+A+ DQ + + T + R+ LY S+ RFQ IYP+YG GELPQAF
Sbjct: 183 FIGHAVALHTNDQHLDQPAFDT---VMRMKLYAESLARFQGT-SPYIYPLYGLGELPQAF 238
Query: 286 CRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSF 336
R +AV G Y+L P + D+ G GV + G+ K+V DPS+
Sbjct: 239 ARLSAVYGGTYMLNKPECKVEFDEG-GKVIGVT-SEGETAKCKKIVCDPSY 287
Score = 110 (43.8 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADL 69
+++IV+GTGL E ++S S G VLH+D N +YG +SL++ L
Sbjct: 5 YEVIVLGTGLKECILSGLLSVDGVKVLHMDRNDYYGGESTSLNLNQL 51
>TAIR|locus:2051839 [details] [associations]
symbol:GDI1 "guanosine nucleotide diphosphate
dissociation inhibitor 1" species:3702 "Arabidopsis thaliana"
[GO:0005093 "Rab GDP-dissociation inhibitor activity"
evidence=IEA;IGI] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0015031
"protein transport" evidence=IEA;ISS] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006487 "protein N-linked glycosylation"
evidence=RCA] [GO:0006623 "protein targeting to vacuole"
evidence=RCA] [GO:0016192 "vesicle-mediated transport"
evidence=RCA] [GO:0048227 "plasma membrane to endosome transport"
evidence=IGI] InterPro:IPR000806 PRINTS:PR00892 Pfam:PF00996
GO:GO:0005829 EMBL:CP002685 GO:GO:0015031 EMBL:AC004005 OMA:FGLDKNT
GO:GO:0005093 InterPro:IPR018203 PRINTS:PR00891 GO:GO:0048227
HSSP:P21856 UniGene:At.23961 ProtClustDB:CLSN2683185 EMBL:AF361801
EMBL:AY050418 EMBL:AY113036 EMBL:D83531 EMBL:AK226690 EMBL:AK227643
IPI:IPI00516952 PIR:T00690 RefSeq:NP_181938.1 UniGene:At.21525
ProteinModelPortal:Q96254 SMR:Q96254 IntAct:Q96254 STRING:Q96254
PRIDE:Q96254 EnsemblPlants:AT2G44100.1 GeneID:819016
KEGG:ath:AT2G44100 TAIR:At2g44100 InParanoid:Q96254
PhylomeDB:Q96254 ArrayExpress:Q96254 Genevestigator:Q96254
Uniprot:Q96254
Length = 445
Score = 246 (91.7 bits), Expect = 1.5e-26, Sum P(2) = 1.5e-26
Identities = 67/234 (28%), Positives = 114/234 (48%)
Query: 106 RNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIF 165
R++N+D+ P+ + V +++ + + YL FK++D +++ K+ VP +
Sbjct: 69 RDYNVDMM-PKFMMANGKLVRVLIHTDVTKYLSFKAVDGSYVF-VQGKVQKVPATPMEAL 126
Query: 166 KDKSLGLMEKNQLMRFFKLVQGHLSLDESEENNV---RISEEDLDSPFAEFLTKMKLPHK 222
K +G+ EK + +FF VQ + D + + R++ +DL + K L
Sbjct: 127 KSPLMGIFEKRRAGKFFSYVQEYDEKDPKTHDGMDLRRVTTKDL-------IAKFGLKED 179
Query: 223 IKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELP 282
+ +A+A+ D + + D + R+ LY S+ RFQ IYP+YG GELP
Sbjct: 180 TIDFIGHAVALHCNDNHLHQ---PAYDTVMRMKLYAESLARFQGG-SPYIYPLYGLGELP 235
Query: 283 QAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSF 336
QAF R +AV G Y+L P + D+ G GV + G+ K+V DPS+
Sbjct: 236 QAFARLSAVYGGTYMLNKPECKVEFDEE-GKVSGVT-SEGETAKCKKVVCDPSY 287
Score = 111 (44.1 bits), Expect = 1.5e-26, Sum P(2) = 1.5e-26
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADL-THFLNSHSTPS 80
+++IV+GTGL E ++S S G VLH+D N +YG +SL++ L F P+
Sbjct: 5 YEVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESTSLNLNQLWKKFRGEEKAPA 63
>UNIPROTKB|E1BT45 [details] [associations]
symbol:CHM "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=IEA] [GO:0005968 "Rab-protein geranylgeranyltransferase
complex" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] InterPro:IPR001738 PRINTS:PR00893
Pfam:PF00996 GO:GO:0006886 GO:GO:0004663 InterPro:IPR018203
PRINTS:PR00891 GeneTree:ENSGT00530000063044 GO:GO:0005968
OMA:GGIYCLK InterPro:IPR016664 PIRSF:PIRSF016550 EMBL:AADN02013429
IPI:IPI00822829 Ensembl:ENSGALT00000011184 ArrayExpress:E1BT45
Uniprot:E1BT45
Length = 657
Score = 303 (111.7 bits), Expect = 4.2e-26, P = 4.2e-26
Identities = 91/309 (29%), Positives = 150/309 (48%)
Query: 34 ESVISAAASASGKSVLHLDPNPFYGSHFSSLSIA-DLTH-FLNSHSTPSSVCPDPLYSDV 91
ES + A + + +DP + + ++ + +H + ST S + S++
Sbjct: 144 ESAVPGAENLESEKATSVDPASAAEGNVTEINAENESSHDSASGESTRESGKTEAALSEI 203
Query: 92 EISNYASRLLSQ---HPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFML 148
SQ R FN+D+ ++L+ ++L++KS S Y EFK+ AT +L
Sbjct: 204 SAQEPKKITYSQIVREGRRFNIDLVS-KLLYSRGLLIELLIKSNVSRYAEFKN--ATRIL 260
Query: 149 D-ADAKLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLD 207
+ K+ VP SRA +F + L ++EK LM+F E E++ E +
Sbjct: 261 AFREGKVEQVPCSRADVFNSRQLAMVEKRMLMKFLTFCL------EYEQHPDEYQEYTDN 314
Query: 208 SPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYNSSIGRFQNA 267
S FA+FL KL ++ +L++IAM VSE T +G+ + +GR+ N
Sbjct: 315 STFAQFLKTRKLTPSLQHFILHSIAM------VSEKDCNTLEGLQATRKFLQCLGRYGNT 368
Query: 268 LGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILS 327
++P+YGQGE+PQ FCR AV G +Y LR V L+ D+ SG K V GQ I +
Sbjct: 369 --PFLFPLYGQGEIPQCFCRMCAVFGGIYCLRHSVQCLVVDKESGRCKAVVDHFGQRISA 426
Query: 328 HKLVLDPSF 336
+ +++ S+
Sbjct: 427 NYFIVEDSY 435
Score = 142 (55.0 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSV 82
FD++VIGTGLPES+I+AA + SG+ VLH+D +YG +++S S + L ++ + + +
Sbjct: 9 FDVVVIGTGLPESIIAAACARSGQRVLHVDSRNYYGGNWASFSFSGLLSWIKENQQNTDI 68
Query: 83 ---CPD 85
C D
Sbjct: 69 KDECED 74
>WB|WBGene00001558 [details] [associations]
symbol:gdi-1 species:6239 "Caenorhabditis elegans"
[GO:0005093 "Rab GDP-dissociation inhibitor activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0008219 "cell death" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] InterPro:IPR000806 PRINTS:PR00892 InterPro:IPR016040
Pfam:PF00996 GO:GO:0008340 GO:GO:0009792 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0015031 GO:GO:0008219 EMBL:Z99281
GO:GO:0000003 HOGENOM:HOG000163825 OMA:FGLDKNT GO:GO:0005093
InterPro:IPR018203 PRINTS:PR00891 GeneTree:ENSGT00530000063044
UniGene:Cel.17646 GeneID:178402 KEGG:cel:CELE_Y57G11C.10 CTD:178402
NextBio:900984 RefSeq:NP_001041044.1 ProteinModelPortal:Q2V4S2
SMR:Q2V4S2 STRING:Q2V4S2 EnsemblMetazoa:Y57G11C.10b.1
EnsemblMetazoa:Y57G11C.10b.2 UCSC:Y57G11C.10a.1
WormBase:Y57G11C.10b InParanoid:Q2V4S2 ArrayExpress:Q2V4S2
Uniprot:Q2V4S2
Length = 459
Score = 233 (87.1 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 65/232 (28%), Positives = 117/232 (50%)
Query: 106 RNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIF 165
R++N+D+ P+ L V L++ +G + YLEFKSI+A+F++ K+ VP
Sbjct: 71 RDWNVDLI-PKFLMANGPLVKLLIHTGVTRYLEFKSIEASFVVKG-GKIYKVPADEMEAL 128
Query: 166 KDKSLGLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKS 225
+G+ EK + +F VQ DE++E+ + + +S + K L
Sbjct: 129 ATSLMGMFEKRRFKKFLVWVQ---QFDENKEDTWQ-GLDPHNSTMQQVYEKFGLDENTAD 184
Query: 226 IVLYAIAMADYDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAF 285
+A+A+ D+ ++ + ++ LY+ S+ R+ + +YP+YG GELPQ F
Sbjct: 185 FTGHALALYRDDEHKNQ---PYAPAVEKIRLYSDSLARYGKS--PYLYPLYGLGELPQGF 239
Query: 286 CRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL-DPSF 336
R +A+ G Y+L PV ++ + +G GV+ G +I+ K + DPS+
Sbjct: 240 ARLSAIYGGTYMLDKPVDEIVME--NGKAIGVKC--GDEIVRGKQIYCDPSY 287
Score = 120 (47.3 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 23/43 (53%), Positives = 30/43 (69%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS 65
+D IV+GTGL E +IS S SGK VLH+D N +YG +SL+
Sbjct: 5 YDAIVLGTGLKECIISGMLSVSGKKVLHIDRNNYYGGESASLT 47
>UNIPROTKB|F1S1P6 [details] [associations]
symbol:CHM "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0001568 "blood vessel development" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005968 "Rab-protein geranylgeranyltransferase complex"
evidence=IEA] [GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=IEA] InterPro:IPR001738 PRINTS:PR00893 Pfam:PF00996
GO:GO:0006886 GO:GO:0001568 GO:GO:0004663 InterPro:IPR018203
PRINTS:PR00891 GeneTree:ENSGT00530000063044 GO:GO:0005968
InterPro:IPR016664 PIRSF:PIRSF016550 OMA:GEKENHC EMBL:FP102371
EMBL:FP236348 EMBL:FP340307 Ensembl:ENSSSCT00000013630
Uniprot:F1S1P6
Length = 614
Score = 285 (105.4 bits), Expect = 1.4e-25, Sum P(2) = 1.4e-25
Identities = 73/221 (33%), Positives = 114/221 (51%)
Query: 116 RVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEK 175
++L+ +DL++KS S Y EFK+I + + ++ VP SRA +F K L ++EK
Sbjct: 195 KLLYSRGLLIDLLIKSNVSRYAEFKNI-TRILAFREGRVEQVPCSRADVFNSKQLTMVEK 253
Query: 176 NQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMAD 235
LM+F + E + + EE F+E+L KL ++ VL++IAM
Sbjct: 254 RMLMKFLTFCMDY----EEYPDEYKAYEE---ISFSEYLKTQKLTPNLQYFVLHSIAMT- 305
Query: 236 YDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCL 295
SE T DG+ + +GR+ N ++P+YGQGELPQ FCR AV G +
Sbjct: 306 -----SETASSTIDGLKATQNFLHCLGRYGNT--PFLFPLYGQGELPQCFCRMCAVFGGI 358
Query: 296 YVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSF 336
Y LR V L+ D+ SG K + GQ I++ +++ S+
Sbjct: 359 YCLRHSVQCLVVDKESGKCKAIIDHFGQRIIAKHFIVEDSY 399
Score = 47 (21.6 bits), Expect = 1.4e-25, Sum P(2) = 1.4e-25
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 56 FYGSHFSSLSIADLTHFLNSHSTPSSV 82
+YG +++S S + L +L H S++
Sbjct: 3 YYGGNWASFSFSGLLSWLKEHQENSNI 29
>FB|FBgn0004868 [details] [associations]
symbol:Gdi "GDP dissociation inhibitor" species:7227
"Drosophila melanogaster" [GO:0005092 "GDP-dissociation inhibitor
activity" evidence=ISS;NAS;IDA] [GO:0007269 "neurotransmitter
secretion" evidence=NAS] [GO:0016192 "vesicle-mediated transport"
evidence=NAS] [GO:0008021 "synaptic vesicle" evidence=NAS]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005093 "Rab
GDP-dissociation inhibitor activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] InterPro:IPR000806
PRINTS:PR00892 Pfam:PF00996 GO:GO:0005875 GO:GO:0016192
GO:GO:0015031 GO:GO:0008021 GO:GO:0007269 GO:GO:0005092
eggNOG:COG5044 GO:GO:0005093 InterPro:IPR018203 PRINTS:PR00891
HSSP:P21856 EMBL:L03209 PIR:S36746 ProteinModelPortal:Q24349
SMR:Q24349 STRING:Q24349 PaxDb:Q24349 PRIDE:Q24349
FlyBase:FBgn0004868 InParanoid:Q24349 OrthoDB:EOG4D2555
ArrayExpress:Q24349 Bgee:Q24349 Uniprot:Q24349
Length = 448
Score = 237 (88.5 bits), Expect = 1.9e-25, Sum P(3) = 1.9e-25
Identities = 68/238 (28%), Positives = 120/238 (50%)
Query: 106 RNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIF 165
R++N+D+ P+ L V L++ +G + YLEFKSI+ +++ K+ VP + +
Sbjct: 70 RDWNVDLI-PKFLMANGQLVKLLIHTGVTRYLEFKSIEGSYVYKG-GKIAKVPVDQKRPW 127
Query: 166 KDKSLGLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKS 225
+G+ EK + F VQ D + ++ ++ + +F L +
Sbjct: 128 HPDLMGMFEKRRFRNFLIYVQDFREDDPKTWKDFDPTKANMQGLYDKF----GLDKNTQD 183
Query: 226 IVLYAIAMADYDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAF 285
+A+A+ D+ ++E + T I R+ LY+ S+ R+ + +YP+YG GELPQ F
Sbjct: 184 FTGHALALFRDDEYLNEPAVNT---IRRIKLYSDSLARYGKS--PYLYPMYGLGELPQGF 238
Query: 286 CRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL-DPSFTVPGSL 342
R +A+ G Y+L P+ ++ + G GVR SG+++ K V DPS+ VP L
Sbjct: 239 ARLSAIYGGTYMLDKPIDEIVLGEG-GKVVGVR--SGEEVAKCKQVYCDPSY-VPRRL 292
Score = 104 (41.7 bits), Expect = 1.9e-25, Sum P(3) = 1.9e-25
Identities = 24/57 (42%), Positives = 32/57 (56%)
Query: 23 FDLIVIGTGLPESVISAAA-SASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHST 78
+D+ V+GTGL E ++S S SGK VLH+D N +YG S SI L + T
Sbjct: 5 YDVDVLGTGLKECILSGIMLSVSGKKVLHIDRNKYYGGE--SASITPLEELFQRYRT 59
Score = 40 (19.1 bits), Expect = 1.9e-25, Sum P(3) = 1.9e-25
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 362 KGKVARGICITR---SSLKPDLSNFLVI 386
+GKV R ICI +S K LS ++I
Sbjct: 295 RGKVIRCICIQDHPGASTKDGLSTQIII 322
>ZFIN|ZDB-GENE-030318-2 [details] [associations]
symbol:chm "choroideremia (Rab escort protein 1)"
species:7955 "Danio rerio" [GO:0005968 "Rab-protein
geranylgeranyltransferase complex" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA;IMP] [GO:0060042
"retina morphogenesis in camera-type eye" evidence=IMP] [GO:0042491
"auditory receptor cell differentiation" evidence=IMP] [GO:0050935
"iridophore differentiation" evidence=IMP] [GO:0050910 "detection
of mechanical stimulus involved in sensory perception of sound"
evidence=IMP] [GO:0048798 "swim bladder inflation" evidence=IMP]
InterPro:IPR001738 PRINTS:PR00893 Pfam:PF00996
ZFIN:ZDB-GENE-030318-2 GO:GO:0006886 GO:GO:0050910 GO:GO:0042491
GO:GO:0004663 GO:GO:0050935 InterPro:IPR018203 PRINTS:PR00891
GO:GO:0060042 GO:GO:0005968 InterPro:IPR016664 PIRSF:PIRSF016550
CTD:1121 HOVERGEN:HBG004961 GO:GO:0048798 EMBL:AY500891
IPI:IPI00491787 RefSeq:NP_982286.1 UniGene:Dr.133306
ProteinModelPortal:Q6RFG0 SMR:Q6RFG0 STRING:Q6RFG0 PRIDE:Q6RFG0
GeneID:402935 KEGG:dre:402935 InParanoid:Q6RFG0 NextBio:20816746
ArrayExpress:Q6RFG0 Bgee:Q6RFG0 Uniprot:Q6RFG0
Length = 666
Score = 234 (87.4 bits), Expect = 2.4e-25, Sum P(2) = 2.4e-25
Identities = 66/184 (35%), Positives = 94/184 (51%)
Query: 151 DAKLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPF 210
+ K+ VP SRA +F K L ++EK LM+F L ++ E SE+ PF
Sbjct: 255 NGKVEQVPCSRADVFASKQLTVVEKRMLMKFLTFC---LDFEQHPEEYQDYSEK----PF 307
Query: 211 AEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGA 270
+EFL KL ++ VL +IAM V++ L T +G+ + +GR+ N
Sbjct: 308 SEFLKNKKLTENLQDFVLLSIAM------VTQQTL-TEEGLKATQHFLRCLGRYGNT--P 358
Query: 271 LIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDI-LSHK 329
++P+YG GE+PQ FCR AV G +Y LR V L+ D+ S K V GQ I SH
Sbjct: 359 FLFPLYGLGEIPQCFCRMCAVFGGIYCLRHSVQCLVVDKESNKVKAVIDTRGQKIGCSHF 418
Query: 330 LVLD 333
+V D
Sbjct: 419 VVED 422
Score = 181 (68.8 bits), Expect = 4.5e-19, Sum P(2) = 4.5e-19
Identities = 53/166 (31%), Positives = 84/166 (50%)
Query: 101 LSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDS 160
L + R FN+D+ ++++ VDL++KS S Y EFK+I + + K+ VP S
Sbjct: 207 LLKEGRRFNIDLVS-KLMYSRGALVDLLIKSNVSRYAEFKNI-GRILTCRNGKVEQVPCS 264
Query: 161 RAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLP 220
RA +F K L ++EK LM+F L ++ E SE+ PF+EFL KL
Sbjct: 265 RADVFASKQLTVVEKRMLMKFLTFC---LDFEQHPEEYQDYSEK----PFSEFLKNKKLT 317
Query: 221 HKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYNSSIGRFQN 266
++ VL +IAM V++ L T +G+ + +GR+ N
Sbjct: 318 ENLQDFVLLSIAM------VTQQTL-TEEGLKATQHFLRCLGRYGN 356
Score = 123 (48.4 bits), Expect = 2.4e-25, Sum P(2) = 2.4e-25
Identities = 23/54 (42%), Positives = 37/54 (68%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSH 76
FD++++GTGL ESVI+AA S G+SVLHLD +Y +++S + L ++ +
Sbjct: 10 FDVVILGTGLTESVIAAACSRVGQSVLHLDRRNYYAGNWASFTFNGLLSWIEEY 63
Score = 39 (18.8 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 12/42 (28%), Positives = 23/42 (54%)
Query: 186 QGHLSLDESEENNVRI-SEEDLDSPFAEFLTKMKLPHKIKSI 226
Q ++ D+ E+NV++ +EE+ DS E L + +S+
Sbjct: 141 QDTVTSDDVTESNVKVQNEENEDSAPKEQLHASDISEHSQSV 182
>CGD|CAL0004982 [details] [associations]
symbol:orf19.6783 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005968 "Rab-protein
geranylgeranyltransferase complex" evidence=IEA] [GO:0006612
"protein targeting to membrane" evidence=IEA] [GO:0032858
"activation of Rab GTPase activity" evidence=IEA] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=IEA] [GO:0018344
"protein geranylgeranylation" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0004663 "Rab geranylgeranyltransferase
activity" evidence=IEA] InterPro:IPR000632 PRINTS:PR00894
CGD:CAL0004982 Pfam:PF00996 GO:GO:0005886 GO:GO:0006886
GO:GO:0005622 EMBL:AACQ01000029 EMBL:AACQ01000028
InterPro:IPR018203 PRINTS:PR00891 InterPro:IPR017230
PIRSF:PIRSF037514 RefSeq:XP_719762.1 RefSeq:XP_719879.1
ProteinModelPortal:Q5ADQ8 STRING:Q5ADQ8 GeneID:3638536
GeneID:3638624 KEGG:cal:CaO19.14075 KEGG:cal:CaO19.6783
Uniprot:Q5ADQ8
Length = 670
Score = 295 (108.9 bits), Expect = 3.3e-25, P = 3.3e-25
Identities = 90/299 (30%), Positives = 149/299 (49%)
Query: 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVC 83
D+++IGTGL ES+++AA S G VLH+D N +YG S+L+I L + ++
Sbjct: 46 DVLIIGTGLQESILAAALSWQGTQVLHIDSNTYYGDSCSTLTIEQLKKWCGDVNSGKI-- 103
Query: 84 PDPLYSDVEISNYASRLLSQHP-RNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSI 142
+ D +I + +Q+ +++ +D++ P+++FC + L++KS YLEF+S+
Sbjct: 104 --HQFQDAQIYIPGGKQSNQYTSKDYGIDLT-PKIMFCQSDLLSLLIKSRVYRYLEFQSL 160
Query: 143 DATFMLDADAKLCSV-PDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENNVRI 201
+ + D V ++ IF DKSL LM K LM+F K L LD + V+
Sbjct: 161 SNFHVFENDDFQQKVNATTKQDIFTDKSLSLMTKRYLMKFLKF----LLLDPDYKQRVK- 215
Query: 202 SEEDLDSPFAEFLTK-MKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYNSS 260
D+P FL + KL + ++Y+I ++ Y ++ S T+ + R+ + SS
Sbjct: 216 --PYADTPIQVFLQQEFKLEEPQINELVYSIGLS-YKEQTS-----TKQALIRMKRFLSS 267
Query: 261 IGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPV-----ISLLTDQNSGSY 314
+ ++ G GEL Q FCR AAV G Y L + IS + N GS+
Sbjct: 268 FDVY-GKFPCMVSKFGGPGELSQGFCRSAAVAGTTYKLNTNLTDFDPISKIAHFNDGSH 325
>UNIPROTKB|Q5ADQ8 [details] [associations]
symbol:MRS6 "Putative uncharacterized protein MRS6"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] InterPro:IPR000632 PRINTS:PR00894
CGD:CAL0004982 Pfam:PF00996 GO:GO:0005886 GO:GO:0006886
GO:GO:0005622 EMBL:AACQ01000029 EMBL:AACQ01000028
InterPro:IPR018203 PRINTS:PR00891 InterPro:IPR017230
PIRSF:PIRSF037514 RefSeq:XP_719762.1 RefSeq:XP_719879.1
ProteinModelPortal:Q5ADQ8 STRING:Q5ADQ8 GeneID:3638536
GeneID:3638624 KEGG:cal:CaO19.14075 KEGG:cal:CaO19.6783
Uniprot:Q5ADQ8
Length = 670
Score = 295 (108.9 bits), Expect = 3.3e-25, P = 3.3e-25
Identities = 90/299 (30%), Positives = 149/299 (49%)
Query: 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVC 83
D+++IGTGL ES+++AA S G VLH+D N +YG S+L+I L + ++
Sbjct: 46 DVLIIGTGLQESILAAALSWQGTQVLHIDSNTYYGDSCSTLTIEQLKKWCGDVNSGKI-- 103
Query: 84 PDPLYSDVEISNYASRLLSQHP-RNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSI 142
+ D +I + +Q+ +++ +D++ P+++FC + L++KS YLEF+S+
Sbjct: 104 --HQFQDAQIYIPGGKQSNQYTSKDYGIDLT-PKIMFCQSDLLSLLIKSRVYRYLEFQSL 160
Query: 143 DATFMLDADAKLCSV-PDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENNVRI 201
+ + D V ++ IF DKSL LM K LM+F K L LD + V+
Sbjct: 161 SNFHVFENDDFQQKVNATTKQDIFTDKSLSLMTKRYLMKFLKF----LLLDPDYKQRVK- 215
Query: 202 SEEDLDSPFAEFLTK-MKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYNSS 260
D+P FL + KL + ++Y+I ++ Y ++ S T+ + R+ + SS
Sbjct: 216 --PYADTPIQVFLQQEFKLEEPQINELVYSIGLS-YKEQTS-----TKQALIRMKRFLSS 267
Query: 261 IGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPV-----ISLLTDQNSGSY 314
+ ++ G GEL Q FCR AAV G Y L + IS + N GS+
Sbjct: 268 FDVY-GKFPCMVSKFGGPGELSQGFCRSAAVAGTTYKLNTNLTDFDPISKIAHFNDGSH 325
>ZFIN|ZDB-GENE-030131-2485 [details] [associations]
symbol:gdi2 "GDP dissociation inhibitor 2"
species:7955 "Danio rerio" [GO:0005093 "Rab GDP-dissociation
inhibitor activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR000806 PRINTS:PR00892 Pfam:PF00996
ZFIN:ZDB-GENE-030131-2485 GO:GO:0015031 GO:GO:0005093
InterPro:IPR018203 PRINTS:PR00891 HOVERGEN:HBG000839 CTD:2665
HSSP:P21856 EMBL:BC045493 IPI:IPI00498442 RefSeq:NP_955949.1
UniGene:Dr.76597 ProteinModelPortal:Q7ZVL9 SMR:Q7ZVL9 STRING:Q7ZVL9
GeneID:323765 KEGG:dre:323765 InParanoid:Q7ZVL9 NextBio:20808427
ArrayExpress:Q7ZVL9 Uniprot:Q7ZVL9
Length = 448
Score = 224 (83.9 bits), Expect = 8.3e-25, Sum P(2) = 8.3e-25
Identities = 60/231 (25%), Positives = 114/231 (49%)
Query: 106 RNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIF 165
R++N+D+ P+ L V ++L + + YL+FK I+ +F+ + + VP +
Sbjct: 70 RDWNVDLI-PKSLMANGQLVRMLLITQVTRYLDFKVIEGSFVYKKGS-IYKVPSTETEAL 127
Query: 166 KDKSLGLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKS 225
+GL EK + +F V + DE++ + + + + K L +
Sbjct: 128 ASSLMGLFEKRRFRKFLVFVA---NFDENDPKTME-GVDPKKTTMRDVYKKFDLGQDVID 183
Query: 226 IVLYAIAMADYDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAF 285
+A+A+ D + + ++T INR+ LY+ S+ R+ + +YP+YG GELPQ F
Sbjct: 184 FTGHALALYRTDDYLDQPCIET---INRIKLYSESLARYGKS--PYLYPLYGLGELPQGF 238
Query: 286 CRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSF 336
R +A+ G Y+L P+ ++ + +G GV+ + G+ +L DPS+
Sbjct: 239 ARLSAIYGGTYMLNKPIEEIVIE--NGKVVGVK-SEGEIARCKQLTCDPSY 286
Score = 122 (48.0 bits), Expect = 8.3e-25, Sum P(2) = 8.3e-25
Identities = 26/59 (44%), Positives = 33/59 (55%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSS 81
+D+IV+GTGL E ++S S GK VLH+D N +YG S SI L S P S
Sbjct: 5 YDVIVLGTGLTECILSGIMSVKGKKVLHMDRNSYYGGE--SASITPLEDLFKRFSLPGS 61
>CGD|CAL0003925 [details] [associations]
symbol:orf19.7261 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0032153 "cell division site"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0005093 "Rab GDP-dissociation inhibitor activity"
evidence=IEA] InterPro:IPR000806 PRINTS:PR00892 CGD:CAL0003925
Pfam:PF00996 GO:GO:0015031 EMBL:AACQ01000092 eggNOG:COG5044
GO:GO:0005093 InterPro:IPR018203 PRINTS:PR00891 RefSeq:XP_715059.1
ProteinModelPortal:Q59ZT0 SMR:Q59ZT0 STRING:Q59ZT0 GeneID:3643298
KEGG:cal:CaO19.7261 Uniprot:Q59ZT0
Length = 449
Score = 222 (83.2 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 60/251 (23%), Positives = 120/251 (47%)
Query: 87 LYSDVEISNYASRLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATF 146
LY + S+ L + R++ +D+ P+ L ++++ + + Y+EFK I A++
Sbjct: 51 LYGKFKPSSQKPELKGRD-RDWCVDLI-PKFLMANGELTNILVNTDVTRYMEFKQIAASY 108
Query: 147 MLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDL 206
+ + ++ VP + +G+ EK ++ RF + +Q + D S + + +
Sbjct: 109 VY-RNGRIAKVPSNAKEALASSLMGIFEKRRMKRFLEFIQNYDEADASTHQGFDLDKNTM 167
Query: 207 DSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYNSSIGRFQN 266
+ E T L + K + +A+A+ D ++E T + R+ LY SS+ ++
Sbjct: 168 N----EIYTYFGLENGTKDFIGHAMALWSTDDYLNEVARPTYE---RIMLYASSVAKYGK 220
Query: 267 ALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDIL 326
+ IYP+YG GELPQ F R +A+ G Y+L P+ +L + K + + +
Sbjct: 221 S--PYIYPLYGLGELPQGFARLSAIYGGTYMLDTPIDEVLYEGEGPDKKFAGVVTKEGTA 278
Query: 327 SHKLVL-DPSF 336
+V+ DP++
Sbjct: 279 RAPIVIADPTY 289
Score = 122 (48.0 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADL 69
+D+IV+GTGL E V+S S GK VLH+D FYG +SL+++ L
Sbjct: 5 YDVIVLGTGLTECVLSGILSVEGKKVLHIDRQDFYGGESASLNLSQL 51
>UNIPROTKB|Q5SX87 [details] [associations]
symbol:GDI2 "Rab GDP dissociation inhibitor beta"
species:9606 "Homo sapiens" [GO:0005093 "Rab GDP-dissociation
inhibitor activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR000806 PRINTS:PR00892 Pfam:PF00996
GO:GO:0015031 HOGENOM:HOG000163825 GO:GO:0005093 InterPro:IPR018203
PRINTS:PR00891 HOVERGEN:HBG000839 EMBL:AL596094 UniGene:Hs.299055
HGNC:HGNC:4227 ChiTaRS:GDI2 IPI:IPI00645255 SMR:Q5SX87
Ensembl:ENST00000456041 Uniprot:Q5SX87
Length = 263
Score = 187 (70.9 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 56/201 (27%), Positives = 94/201 (46%)
Query: 122 DHAVDLMLK----SGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQ 177
D VDL+ K + + YL+FK + +F+ K+ VP + A +GL EK +
Sbjct: 71 DWNVDLIPKFLMANEVTRYLDFKVTEGSFVYKG-GKIYKVPSTEAEALASSLMGLFEKRR 129
Query: 178 LMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYD 237
+F V + DE + + + + K L + +A+A+ D
Sbjct: 130 FRKFLVYVA---NFDEKDPRTFE-GIDPKKTTMRDVYKKFDLGQDVIDFTGHALALYRTD 185
Query: 238 QEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYV 297
+ + +T INR+ LY+ S+ R+ + +YP+YG GELPQ F R +A+ G Y+
Sbjct: 186 DYLDQPCYET---INRIKLYSESLARYGKS--PYLYPLYGLGELPQGFARLSAIYGGTYM 240
Query: 298 LRMPVISLLTDQNSGSYKGVR 318
L P+ ++ QN G GV+
Sbjct: 241 LNKPIEEIIV-QN-GKVIGVK 259
Score = 129 (50.5 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 27/62 (43%), Positives = 40/62 (64%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS-IADL-THFLNSHSTPS 80
+D+IV+GTGL E ++S S +GK VLH+D NP+YG +S++ + DL F S P
Sbjct: 5 YDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESASITPLEDLYKRFKIPGSPPE 64
Query: 81 SV 82
S+
Sbjct: 65 SM 66
>ZFIN|ZDB-GENE-050809-120 [details] [associations]
symbol:zgc:112334 "zgc:112334" species:7955 "Danio
rerio" [GO:0005093 "Rab GDP-dissociation inhibitor activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR000806
PRINTS:PR00892 Pfam:PF00996 ZFIN:ZDB-GENE-050809-120 GO:GO:0015031
GO:GO:0005093 InterPro:IPR018203 PRINTS:PR00891
GeneTree:ENSGT00530000063044 EMBL:CU652212 EMBL:CU693473
EMBL:CABZ01052257 EMBL:CABZ01052258 EMBL:CABZ01052265
EMBL:CABZ01052266 EMBL:CABZ01052267 EMBL:CABZ01052268
EMBL:CABZ01052269 EMBL:CABZ01052270 EMBL:CABZ01072695
EMBL:CABZ01072696 EMBL:CABZ01072697 EMBL:CABZ01072698
EMBL:CABZ01072699 EMBL:CABZ01085135 EMBL:CABZ01085136
EMBL:CABZ01085137 EMBL:CABZ01085138 EMBL:CABZ01085139
EMBL:CABZ01085140 EMBL:CABZ01085141 EMBL:CABZ01099332
EMBL:CABZ01101810 EMBL:CABZ01101811 EMBL:CABZ01101812
IPI:IPI00996490 Ensembl:ENSDART00000020045 Bgee:F1R348
Uniprot:F1R348
Length = 441
Score = 199 (75.1 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 69/262 (26%), Positives = 126/262 (48%)
Query: 80 SSVCP-DPLYSDVEISNYASRLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLE 138
+S+ P + LYS + A L +++N+D+ +L + V ++L S + YL+
Sbjct: 44 ASISPLEELYSRFRVP--APDKLMGRGKDWNVDLIPKFLLANSGQLVKMLLYSEVTRYLD 101
Query: 139 FKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENN 198
FK ++ F+ K+ VP + A +G+ +K + +F V L+ DES+
Sbjct: 102 FKVVEGNFVYKG-GKIHKVPITEAETQASDLMGMFDKRRFRKFLSFV---LNFDESDPR- 156
Query: 199 VRISEEDLD---SPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLA 255
+ D+D + E L + +A+A+ ++ + + L T INR+
Sbjct: 157 ---THHDMDPRNTSMREVFRHFDLGDDVVEFTGHALAL-HANEYLEQPCLLT---INRIK 209
Query: 256 LYNSSIGRFQNALGALIYPIYGQGELPQAFCRR-AAVKGCLYVLRMPVISLLTDQNSGSY 314
LY+ S+ R+ +L +YP++G GELPQ F R +AV G ++L V ++ + G
Sbjct: 210 LYSESLARY--SLSPYLYPLFGLGELPQGFVSRLSAVYGNSFLLNRRVEEVVLE--GGRV 265
Query: 315 KGVRLASGQDILSHKLVLDPSF 336
VR + G+ +L+ DPS+
Sbjct: 266 AAVR-SEGEVFRCKQLISDPSY 286
Score = 140 (54.3 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 32/65 (49%), Positives = 40/65 (61%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSV 82
FD+IV+GTGL E V+S SA+GK VLHLD NP+YG S SI+ L + P+
Sbjct: 5 FDVIVLGTGLKECVLSGLMSANGKKVLHLDSNPYYGGE--SASISPLEELYSRFRVPA-- 60
Query: 83 CPDPL 87
PD L
Sbjct: 61 -PDKL 64
Score = 40 (19.1 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 150 ADAKLCSVPDSRAA 163
+D + CSV D+RA+
Sbjct: 330 SDKRFCSVGDARAS 343
>UNIPROTKB|F1P112 [details] [associations]
symbol:GDI2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005093 "Rab GDP-dissociation inhibitor activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005097 "Rab GTPase activator activity" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0009986
"cell surface" evidence=IEA] InterPro:IPR000806 PRINTS:PR00892
Pfam:PF00996 GO:GO:0005794 GO:GO:0007264 GO:GO:0009986
GO:GO:0015031 GO:GO:0005097 GO:GO:0005093 InterPro:IPR018203
PRINTS:PR00891 GeneTree:ENSGT00530000063044 OMA:YKRMMGS
EMBL:AADN02039793 IPI:IPI00681909 Ensembl:ENSGALT00000033336
ArrayExpress:F1P112 Uniprot:F1P112
Length = 448
Score = 234 (87.4 bits), Expect = 1.4e-23, Sum P(2) = 1.4e-23
Identities = 66/258 (25%), Positives = 124/258 (48%)
Query: 80 SSVCP-DPLYSDVEISNYASRLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLE 138
+S+ P + LY + + + R++N+D+ P+ L V ++L + + YL+
Sbjct: 44 ASITPLEDLYKRFNLPGTPPESMGRG-RDWNVDLI-PKFLMANGQLVKMLLYTEVTRYLD 101
Query: 139 FKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENN 198
FK I+ +F+ K+ VP + A +GL EK + +F V + DE++
Sbjct: 102 FKVIEGSFVYKG-GKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVA---NFDENDPRT 157
Query: 199 VRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYN 258
+ + + K L + +A+A+ D + + +T INR+ LY+
Sbjct: 158 FE-GVDPKKTTMRDVYKKFDLGQDVIDFTGHALALYRTDDYLDQPCQET---INRIKLYS 213
Query: 259 SSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVR 318
S+ R+ + +YP+YG GELPQ F R +A+ G Y+L P+ ++ + +G GV+
Sbjct: 214 ESLARYGKS--PYLYPLYGLGELPQGFARLSAIYGGTYMLNKPIEEIVIE--NGKVVGVK 269
Query: 319 LASGQDILSHKLVLDPSF 336
+ G+ +L+ DPS+
Sbjct: 270 -SEGEVARCKQLICDPSY 286
Score = 98 (39.6 bits), Expect = 1.4e-23, Sum P(2) = 1.4e-23
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 25 LIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS-IADLTHFLNSHSTP 79
++V+G E ++S S +GK VLH+D N +YG +S++ + DL N TP
Sbjct: 7 MLVLGWSCKECILSGIMSVNGKKVLHMDRNSYYGGESASITPLEDLYKRFNLPGTP 62
>POMBASE|SPBC15C4.03 [details] [associations]
symbol:SPBC15C4.03 "Rab geranylgeranyltransferase escort
protein (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0005092 "GDP-dissociation inhibitor activity" evidence=ISM]
[GO:0005096 "GTPase activator activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=ISM] InterPro:IPR000632 PRINTS:PR00894 PomBase:SPBC15C4.03
Pfam:PF00996 GO:GO:0005829 GO:GO:0005634 GO:GO:0006886
GO:GO:0007264 GO:GO:0005096 GO:GO:0043547 EMBL:CU329671
GO:GO:0005092 eggNOG:COG5044 InterPro:IPR018203 PRINTS:PR00891
OrthoDB:EOG4BP4M5 InterPro:IPR017230 PIRSF:PIRSF037514 PIR:T39473
RefSeq:NP_595923.1 HSSP:P37727 ProteinModelPortal:O60112
STRING:O60112 EnsemblFungi:SPBC15C4.03.1 GeneID:2539612
KEGG:spo:SPBC15C4.03 NextBio:20800769 Uniprot:O60112
Length = 459
Score = 282 (104.3 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 100/364 (27%), Positives = 172/364 (47%)
Query: 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHST--P 79
++D+I++GT L S++SAA S + + VLH+D N FYG SL++ DL
Sbjct: 6 SYDVIIVGTNLRNSILSAALSWANQRVLHIDENSFYGEIDGSLTLRDLEQINEKIKKVDS 65
Query: 80 SSVCPDPLYSDVEISNYASRLLSQH--PRNFNLDVS-GPRVLFCADHAVDLMLKSGASHY 136
S + D + + + L++ P+N + P+ +F + V L+ ++ Y
Sbjct: 66 SQILNDNGSHKSPLKRFEVQFLNKDLIPKNKGSVIQFHPQEIFASSELVKLLSETKIYKY 125
Query: 137 LEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEE 196
L K + +L ++ + VP+SRA IF +K+L L K +MRF K V DE +
Sbjct: 126 LLLKPARSFRLLTSNEEWIKVPESRADIFNNKNLSLASKRIVMRFMKFVSN--IADEQNQ 183
Query: 197 NNVRISEEDLDSPFAEFLTKM-KLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLA 255
N V+ E PF +FL ++ +L I+ ++Y + Q +S+ + T+D ++ +
Sbjct: 184 NLVKEWES---KPFYKFLEEVFQLSGAIEESIIYGLC-----QSLSKDI-PTKDALDTVL 234
Query: 256 LYNSSIGRFQNALGALIYPIYGQG-ELPQAFCRRAAVKGCLYVLRMPVISL------LTD 308
Y S G + + + + +YG G EL Q FCR +AV G ++L + + L D
Sbjct: 235 KYFHSFGMYGDY--SYLLAMYGTGSELCQGFCRSSAVMGGTFMLGQAIDKIDESKIVLKD 292
Query: 309 QNSGSYKGVRLASGQDILSHKLVLDPSFTVPGSLASSHQQ------LQES---FQAFSLS 359
++ S K + + + L H+ + V G Q+ L S F FS+S
Sbjct: 293 GSTLSAKKIVSSVDEGKLPHQQIQQRYLLVKGDCQQLFQEDGFFAALDASLIHFSPFSIS 352
Query: 360 DNKG 363
+N G
Sbjct: 353 ENFG 356
>UNIPROTKB|B4DRL9 [details] [associations]
symbol:CHM "Rab proteins geranylgeranyltransferase
component A 1" species:9606 "Homo sapiens" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0005968
"Rab-protein geranylgeranyltransferase complex" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA]
InterPro:IPR001738 PRINTS:PR00893 Pfam:PF00996 GO:GO:0006886
GO:GO:0001568 GO:GO:0004663 InterPro:IPR018203 PRINTS:PR00891
GO:GO:0005968 InterPro:IPR016664 PIRSF:PIRSF016550 EMBL:AL009175
EMBL:AL022401 EMBL:AL035451 EMBL:AL138748 UniGene:Hs.496449
HGNC:HGNC:1940 HOVERGEN:HBG004961 EMBL:AK299323 IPI:IPI01015378
SMR:B4DRL9 STRING:B4DRL9 Ensembl:ENST00000537751 Uniprot:B4DRL9
Length = 505
Score = 283 (104.7 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 80/245 (32%), Positives = 125/245 (51%)
Query: 116 RVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEK 175
++L+ +DL++KS S Y EFK+I + + ++ VP SRA +F K L ++EK
Sbjct: 86 KLLYSRGLLIDLLIKSNVSRYAEFKNI-TRILAFREGRVEQVPCSRADVFNSKQLTMVEK 144
Query: 176 NQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMAD 235
LM+F + E + + EE F E+L KL ++ IV+++IAM
Sbjct: 145 RMLMKFLTFCMEY----EKYPDEYKGYEE---ITFYEYLKTQKLTPNLQYIVMHSIAMT- 196
Query: 236 YDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCL 295
SE T DG+ + +GR+ N ++P+YGQGELPQ FCR AV G +
Sbjct: 197 -----SETASSTIDGLKATKNFLHCLGRYGNT--PFLFPLYGQGELPQCFCRMCAVFGGI 249
Query: 296 YVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSFTVPGSLASSHQQLQESFQA 355
Y LR V L+ D+ S K + GQ I+S +++ S+ P ++ S Q Q S +A
Sbjct: 250 YCLRHSVQCLVVDKESRKCKAIIDQFGQRIISEHFLVEDSY-FPENMCSRVQYRQIS-RA 307
Query: 356 FSLSD 360
++D
Sbjct: 308 VLITD 312
>UNIPROTKB|E7EU23 [details] [associations]
symbol:GDI2 "Rab GDP dissociation inhibitor beta"
species:9606 "Homo sapiens" [GO:0005093 "Rab GDP-dissociation
inhibitor activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR000806 PRINTS:PR00892 Pfam:PF00996
GO:GO:0015031 GO:GO:0005093 InterPro:IPR018203 PRINTS:PR00891
OMA:YKRMMGS EMBL:AL596094 HGNC:HGNC:4227 ChiTaRS:GDI2
IPI:IPI00031461 ProteinModelPortal:E7EU23 SMR:E7EU23 PRIDE:E7EU23
Ensembl:ENST00000380132 UCSC:uc009xid.3 ArrayExpress:E7EU23
Bgee:E7EU23 Uniprot:E7EU23
Length = 449
Score = 233 (87.1 bits), Expect = 4.1e-23, Sum P(3) = 4.1e-23
Identities = 68/258 (26%), Positives = 123/258 (47%)
Query: 80 SSVCP-DPLYSDVEISNYASRLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLE 138
+S+ P + LY +I + + R++N+D+ P+ L V ++L + + YL+
Sbjct: 48 ASITPLEDLYKRFKIPGSPPESMGRG-RDWNVDLI-PKFLMANGQLVKMLLYTEVTRYLD 105
Query: 139 FKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENN 198
FK + +F+ K+ VP + A +GL EK + +F V + DE +
Sbjct: 106 FKVTEGSFVYKG-GKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVA---NFDEKDPRT 161
Query: 199 VRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYN 258
+ + + K L + +A+A+ D + + +T INR+ LY+
Sbjct: 162 FE-GIDPKKTTMRDVYKKFDLGQDVIDFTGHALALYRTDDYLDQPCYET---INRIKLYS 217
Query: 259 SSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVR 318
S+ R+ + +YP+YG GELPQ F R +A+ G Y+L P+ ++ QN G GV+
Sbjct: 218 ESLARYGKS--PYLYPLYGLGELPQGFARLSAIYGGTYMLNKPIEEIIV-QN-GKVIGVK 273
Query: 319 LASGQDILSHKLVLDPSF 336
+ G+ +L+ DPS+
Sbjct: 274 -SEGEIARCKQLICDPSY 290
Score = 89 (36.4 bits), Expect = 4.1e-23, Sum P(3) = 4.1e-23
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 34 ESVISAAASASGKSVLHLDPNPFYGSHFSSLS-IADL-THFLNSHSTPSSV 82
E ++S S +GK VLH+D NP+YG +S++ + DL F S P S+
Sbjct: 20 ECILSGIMSVNGKKVLHMDRNPYYGGESASITPLEDLYKRFKIPGSPPESM 70
Score = 38 (18.4 bits), Expect = 4.1e-23, Sum P(3) = 4.1e-23
Identities = 13/51 (25%), Positives = 22/51 (43%)
Query: 340 GSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKP--DLSNFLVIFP 388
G +A Q + + + G+V R ICI +K D ++ +I P
Sbjct: 276 GEIARCKQLICDPSYVKDRVEKVGQVIRVICILSHPIKNTNDANSCQIIIP 326
>UNIPROTKB|F1P8L7 [details] [associations]
symbol:GDI2 "Rab GDP dissociation inhibitor beta"
species:9615 "Canis lupus familiaris" [GO:0009986 "cell surface"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005097 "Rab GTPase activator activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005093 "Rab GDP-dissociation inhibitor activity" evidence=IEA]
InterPro:IPR000806 PRINTS:PR00892 Pfam:PF00996 GO:GO:0005794
GO:GO:0007264 GO:GO:0009986 GO:GO:0015031 GO:GO:0005097
GO:GO:0005093 InterPro:IPR018203 PRINTS:PR00891
GeneTree:ENSGT00530000063044 OMA:YKRMMGS EMBL:AAEX03001320
ProteinModelPortal:F1P8L7 Ensembl:ENSCAFT00000008422 Uniprot:F1P8L7
Length = 430
Score = 235 (87.8 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 69/258 (26%), Positives = 123/258 (47%)
Query: 80 SSVCP-DPLYSDVEISNYASRLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLE 138
+S+ P + LY +I + + R++N+D+ P+ L V ++L + + YL+
Sbjct: 29 ASITPLEDLYKRFKIPGAPPASMGRG-RDWNVDLI-PKFLMANGQLVKMLLYTEVTRYLD 86
Query: 139 FKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENN 198
FK + +F+ K+ VP + A +GL EK + +F V + DE +
Sbjct: 87 FKVTEGSFVYKG-GKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVA---NFDEKDPRT 142
Query: 199 VRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYN 258
+ + E K L + +A+A+ D + + +T INR+ LY+
Sbjct: 143 FE-GIDPKKTAMREVYKKFDLGQDVIDFTGHALALYRTDDYLDQPCCET---INRIKLYS 198
Query: 259 SSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVR 318
S+ R+ + +YP+YG GELPQ F R +A+ G Y+L P+ ++ QN G GV+
Sbjct: 199 ESLARYGKS--PYLYPLYGLGELPQGFARLSAIYGGTYMLNKPIEEIIV-QN-GKVIGVK 254
Query: 319 LASGQDILSHKLVLDPSF 336
+ G+ +L+ DPS+
Sbjct: 255 -SEGEVARCKQLICDPSY 271
Score = 87 (35.7 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 34 ESVISAAASASGKSVLHLDPNPFYGSHFSSLS-IADL-THFLNSHSTPSSV 82
E ++S S +GK VLH+D NP+YG +S++ + DL F + P+S+
Sbjct: 1 ECILSGIMSVNGKKVLHMDRNPYYGGESASITPLEDLYKRFKIPGAPPASM 51
>UNIPROTKB|F1NCZ2 [details] [associations]
symbol:GDI2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005093 "Rab GDP-dissociation inhibitor activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005097 "Rab GTPase activator activity" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0009986
"cell surface" evidence=IEA] InterPro:IPR000806 PRINTS:PR00892
Pfam:PF00996 GO:GO:0005794 GO:GO:0007264 GO:GO:0009986
GO:GO:0015031 GO:GO:0005097 GO:GO:0005093 InterPro:IPR018203
PRINTS:PR00891 GeneTree:ENSGT00530000063044 EMBL:AADN02039793
IPI:IPI00589584 Ensembl:ENSGALT00000013282 ArrayExpress:F1NCZ2
Uniprot:F1NCZ2
Length = 433
Score = 234 (87.4 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 66/258 (25%), Positives = 124/258 (48%)
Query: 80 SSVCP-DPLYSDVEISNYASRLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLE 138
+S+ P + LY + + + R++N+D+ P+ L V ++L + + YL+
Sbjct: 29 ASITPLEDLYKRFNLPGTPPESMGRG-RDWNVDLI-PKFLMANGQLVKMLLYTEVTRYLD 86
Query: 139 FKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENN 198
FK I+ +F+ K+ VP + A +GL EK + +F V + DE++
Sbjct: 87 FKVIEGSFVYKG-GKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVA---NFDENDPRT 142
Query: 199 VRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYN 258
+ + + K L + +A+A+ D + + +T INR+ LY+
Sbjct: 143 FE-GVDPKKTTMRDVYKKFDLGQDVIDFTGHALALYRTDDYLDQPCQET---INRIKLYS 198
Query: 259 SSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVR 318
S+ R+ + +YP+YG GELPQ F R +A+ G Y+L P+ ++ + +G GV+
Sbjct: 199 ESLARYGKS--PYLYPLYGLGELPQGFARLSAIYGGTYMLNKPIEEIVIE--NGKVVGVK 254
Query: 319 LASGQDILSHKLVLDPSF 336
+ G+ +L+ DPS+
Sbjct: 255 -SEGEVARCKQLICDPSY 271
Score = 86 (35.3 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 34 ESVISAAASASGKSVLHLDPNPFYGSHFSSLS-IADLTHFLNSHSTP 79
E ++S S +GK VLH+D N +YG +S++ + DL N TP
Sbjct: 1 ECILSGIMSVNGKKVLHMDRNSYYGGESASITPLEDLYKRFNLPGTP 47
>UNIPROTKB|G4MT60 [details] [associations]
symbol:MGG_07137 "Rab GDP-dissociation inhibitor"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000806 PRINTS:PR00892
Pfam:PF00996 GO:GO:0016192 GO:GO:0015031 EMBL:CM001232
GO:GO:0005093 InterPro:IPR018203 PRINTS:PR00891
RefSeq:XP_003715332.1 EnsemblFungi:MGG_07137T0 GeneID:2683259
KEGG:mgr:MGG_07137 Uniprot:G4MT60
Length = 464
Score = 188 (71.2 bits), Expect = 7.9e-20, Sum P(2) = 7.9e-20
Identities = 56/223 (25%), Positives = 109/223 (48%)
Query: 102 SQHPRN--FNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDAD---AKLCS 156
+++ RN +N+D+ P+ L + ++++ + + YLEFK + +F+ A +
Sbjct: 69 AKYGRNTDWNIDLV-PKFLMSSGELTNILVSTDVTRYLEFKQVAGSFVQQGSGPKATVAK 127
Query: 157 VPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSL-DESEENNVRISEEDLDSPFAEFLT 215
VP A + +G+ EK ++ F + V G L D + + +S + + +F
Sbjct: 128 VPSDAAEALRSPLMGIFEKRRMKSFIEWV-GTFDLKDPATHKGLDLSSCTMKDVYDKF-- 184
Query: 216 KMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPI 275
L K + +A+A+ D +S+ + I+R+ LY +S+ R+ + IYP+
Sbjct: 185 --GLETGTKDFIGHAMALYLSDDYISKPG-GAPEAIDRIRLYGNSVARYGKS--PYIYPL 239
Query: 276 YGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVR 318
+G G+LPQ F R +A+ G Y+L + LL + G G++
Sbjct: 240 FGLGDLPQGFARLSAIYGGTYMLNTNIDELLYED--GKAVGIK 280
Score = 117 (46.2 bits), Expect = 7.9e-20, Sum P(2) = 7.9e-20
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADL 69
+D+IV+GTGL E ++S S GK VLH+D N YG +SL++ L
Sbjct: 8 YDVIVLGTGLTECILSGVLSVKGKKVLHIDRNDHYGGEAASLNLQAL 54
>UNIPROTKB|G5EHS7 [details] [associations]
symbol:MGCH7_ch7g422 "Rab protein geranylgeranyltransferase
component A" species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] Pfam:PF00996 GO:GO:0016740 EMBL:CM000230 EMBL:CM001237
InterPro:IPR018203 PRINTS:PR00891 InterPro:IPR017230
PIRSF:PIRSF037514 RefSeq:XP_003721083.1 EnsemblFungi:MGG_12615T0
GeneID:5050492 KEGG:mgr:MGG_12615 Uniprot:G5EHS7
Length = 530
Score = 248 (92.4 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 87/333 (26%), Positives = 163/333 (48%)
Query: 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHST-- 78
T +D+++ GTGL +S+++ A S S K VLHLDPN FYG ++L++ + + +HS+
Sbjct: 7 TLWDVVICGTGLQQSLLALALSRSDKKVLHLDPNNFYGGPEAALTLLEAEEWAKAHSSQQ 66
Query: 79 --PSS--VCPD-P-LYSDVEIS-----NYASRLLSQHPRNFNLDVSGPRVLFCADHAVDL 127
PS C P ++ ++ + A+ LS PR ++L ++ P ++ V+
Sbjct: 67 QSPSGDLKCASAPSTFASANVTRPQDGDEATGGLSS-PRAYSLALA-PHIIHARSRLVEQ 124
Query: 128 MLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQL-MRFFKLVQ 186
++ S A LEF ++ + F+L + + R + + + R + +
Sbjct: 125 LVSSRAFRQLEFLAVGSFFVLSRSSSQDTANPLRLTRIPSTREDVFSDSSIPARAKRSLM 184
Query: 187 GHLS--LDESEENNVRISEEDLDSPFAEFL-TKMKLPHKIKSIVLYAIAMADYDQEVSEY 243
L LD + E I + + DSP A FL TK KL + +++ V+ + +A ++
Sbjct: 185 KFLKFVLDYNSEPQTEIWQAEADSPLAGFLETKFKLDNDLRAYVV-TLTLAPDGNAIT-- 241
Query: 244 VLKTRDGINRLALYNSSIGRFQNALGALIYPIYG-QGELPQAFCRRAAVKGCLYVLRMPV 302
T+DG+ + + +S+G F A +YP +G E+ Q CR AV G +Y+L +
Sbjct: 242 ---TKDGLAAIHRHLTSMGYFGPGFAA-VYPKWGGASEIAQVACRSGAVGGGVYMLGTGI 297
Query: 303 ISLLT---DQNSGSYKGVRLASGQDILSHKLVL 332
++ T D++ + L S + ++ KL++
Sbjct: 298 KNIKTAESDESEVDSLSIEL-SNETVVRTKLLV 329
>GENEDB_PFALCIPARUM|PFL2060c [details] [associations]
symbol:PFL2060c "rabGDI protein" species:5833
"Plasmodium falciparum" [GO:0005097 "Rab GTPase activator activity"
evidence=ISS] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000806 PRINTS:PR00892 Pfam:PF00996 GO:GO:0016192
GO:GO:0015031 EMBL:AE014188 GO:GO:0005097 HOGENOM:HOG000163825
GO:GO:0005093 InterPro:IPR018203 PRINTS:PR00891 OMA:YKRMMGS
ProtClustDB:PTZ00363 RefSeq:XP_001350816.1 PDB:3P1W PDBsum:3P1W
ProteinModelPortal:Q8I501 SMR:Q8I501 IntAct:Q8I501
MINT:MINT-1548866 PRIDE:Q8I501 EnsemblProtists:PFL2060c:mRNA
GeneID:811464 KEGG:pfa:PFL2060c EuPathDB:PlasmoDB:PF3D7_1242800
Uniprot:Q8I501
Length = 459
Score = 171 (65.3 bits), Expect = 3.6e-18, Sum P(2) = 3.6e-18
Identities = 57/245 (23%), Positives = 117/245 (47%)
Query: 106 RNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAK--LCS------V 157
R++N+D+ P+ + + V ++ K+ ++YLE+ ++ +++ K L S V
Sbjct: 69 RHWNVDLI-PKFILVGGNLVKILKKTRVTNYLEWLVVEGSYVYQHQKKGFLTSEKFIHKV 127
Query: 158 PDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKM 217
P + L LMEKN+ F++ V D ++ N + ++LD P+ + ++
Sbjct: 128 PATDMEALVSPLLSLMEKNRCKNFYQYVS---EWDANKRN----TWDNLD-PYKLTMLEI 179
Query: 218 KLPHKIKSIVL----YAIAMADYDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIY 273
+ + + +A+A+ D + + T + R+ LY SI F + IY
Sbjct: 180 YKHFNLCQLTIDFLGHAVALYLNDDYLKQPAYLT---LERIKLYMQSISAFGKS--PFIY 234
Query: 274 PIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333
P+YG G +P+ F R A+ G ++L V+ + D ++ G++ + G+ K++ D
Sbjct: 235 PLYGLGGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDN-KVCGIKSSDGEIAYCDKVICD 293
Query: 334 PSFTV 338
PS+ +
Sbjct: 294 PSYVM 298
Score = 120 (47.3 bits), Expect = 3.6e-18, Sum P(2) = 3.6e-18
Identities = 24/59 (40%), Positives = 38/59 (64%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTH-FLNSHSTPS 80
+D+I++GTGL E ++S S GK +L LD NP+YG +SL++ +L + F + PS
Sbjct: 5 YDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETASLNLTNLYNTFKPKENIPS 63
>UNIPROTKB|Q8I501 [details] [associations]
symbol:PFL2060c "RabGDI protein" species:36329 "Plasmodium
falciparum 3D7" [GO:0005097 "Rab GTPase activator activity"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016192 "vesicle-mediated transport" evidence=ISS] [GO:0032851
"positive regulation of Rab GTPase activity" evidence=ISS]
InterPro:IPR000806 PRINTS:PR00892 Pfam:PF00996 GO:GO:0016192
GO:GO:0015031 EMBL:AE014188 GO:GO:0005097 HOGENOM:HOG000163825
GO:GO:0005093 InterPro:IPR018203 PRINTS:PR00891 OMA:YKRMMGS
ProtClustDB:PTZ00363 RefSeq:XP_001350816.1 PDB:3P1W PDBsum:3P1W
ProteinModelPortal:Q8I501 SMR:Q8I501 IntAct:Q8I501
MINT:MINT-1548866 PRIDE:Q8I501 EnsemblProtists:PFL2060c:mRNA
GeneID:811464 KEGG:pfa:PFL2060c EuPathDB:PlasmoDB:PF3D7_1242800
Uniprot:Q8I501
Length = 459
Score = 171 (65.3 bits), Expect = 3.6e-18, Sum P(2) = 3.6e-18
Identities = 57/245 (23%), Positives = 117/245 (47%)
Query: 106 RNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAK--LCS------V 157
R++N+D+ P+ + + V ++ K+ ++YLE+ ++ +++ K L S V
Sbjct: 69 RHWNVDLI-PKFILVGGNLVKILKKTRVTNYLEWLVVEGSYVYQHQKKGFLTSEKFIHKV 127
Query: 158 PDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKM 217
P + L LMEKN+ F++ V D ++ N + ++LD P+ + ++
Sbjct: 128 PATDMEALVSPLLSLMEKNRCKNFYQYVS---EWDANKRN----TWDNLD-PYKLTMLEI 179
Query: 218 KLPHKIKSIVL----YAIAMADYDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIY 273
+ + + +A+A+ D + + T + R+ LY SI F + IY
Sbjct: 180 YKHFNLCQLTIDFLGHAVALYLNDDYLKQPAYLT---LERIKLYMQSISAFGKS--PFIY 234
Query: 274 PIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333
P+YG G +P+ F R A+ G ++L V+ + D ++ G++ + G+ K++ D
Sbjct: 235 PLYGLGGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDN-KVCGIKSSDGEIAYCDKVICD 293
Query: 334 PSFTV 338
PS+ +
Sbjct: 294 PSYVM 298
Score = 120 (47.3 bits), Expect = 3.6e-18, Sum P(2) = 3.6e-18
Identities = 24/59 (40%), Positives = 38/59 (64%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTH-FLNSHSTPS 80
+D+I++GTGL E ++S S GK +L LD NP+YG +SL++ +L + F + PS
Sbjct: 5 YDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETASLNLTNLYNTFKPKENIPS 63
>SGD|S000000938 [details] [associations]
symbol:GDI1 "GDP dissociation inhibitor" species:4932
"Saccharomyces cerevisiae" [GO:0043547 "positive regulation of
GTPase activity" evidence=IEA] [GO:0005093 "Rab GDP-dissociation
inhibitor activity" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016192 "vesicle-mediated transport" evidence=IMP] [GO:0005096
"GTPase activator activity" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR000806 PRINTS:PR00892 SGD:S000000938 Pfam:PF00996
GO:GO:0005737 GO:GO:0016192 GO:GO:0005096 GO:GO:0043547
GO:GO:0015031 EMBL:BK006939 EMBL:U18916 eggNOG:COG5044
HOGENOM:HOG000163825 OrthoDB:EOG4XSPZC GO:GO:0005093
InterPro:IPR018203 PRINTS:PR00891 EMBL:S69371 PIR:S44446
RefSeq:NP_011062.1 PDB:1UKV PDB:2BCG PDB:3CPH PDB:3CPI PDB:3CPJ
PDBsum:1UKV PDBsum:2BCG PDBsum:3CPH PDBsum:3CPI PDBsum:3CPJ
ProteinModelPortal:P39958 SMR:P39958 DIP:DIP-785N IntAct:P39958
MINT:MINT-502785 STRING:P39958 UCD-2DPAGE:P39958 PaxDb:P39958
PeptideAtlas:P39958 EnsemblFungi:YER136W GeneID:856876
KEGG:sce:YER136W CYGD:YER136w GeneTree:ENSGT00530000063044
OMA:HPIANTG EvolutionaryTrace:P39958 NextBio:983252
Genevestigator:P39958 GermOnline:YER136W Uniprot:P39958
Length = 451
Score = 235 (87.8 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 56/244 (22%), Positives = 121/244 (49%)
Query: 106 RNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIF 165
R++N+D+ P+ L ++++ + + Y++FK + +++ K+ VP +
Sbjct: 78 RDWNVDLI-PKFLMANGELTNILIHTDVTRYVDFKQVSGSYVFK-QGKIYKVPANEIEAI 135
Query: 166 KDKSLGLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKS 225
+G+ EK ++ +F + + + D S + + + +D + +F L + K
Sbjct: 136 SSPLMGIFEKRRMKKFLEWISSYKEDDLSTHQGLDLDKNTMDEVYYKF----GLGNSTKE 191
Query: 226 IVLYAIAMADYDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAF 285
+ +A+A+ D + + R R+ LY S+ R+ + +YP+YG GELPQ F
Sbjct: 192 FIGHAMALWTNDDYLQQ---PARPSFERILLYCQSVARYGKS--PYLYPMYGLGELPQGF 246
Query: 286 CRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSFTVPGSLASS 345
R +A+ G Y+L P+ +L +++G ++GV+ G + ++ DP++ P S+
Sbjct: 247 ARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKTKLGT-FKAPLVIADPTY-FPEKCKST 304
Query: 346 HQQL 349
Q++
Sbjct: 305 GQRV 308
Score = 129 (50.5 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 30/127 (23%), Positives = 63/127 (49%)
Query: 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPS 80
T +D+IV+GTG+ E ++S S GK VLH+D YG +S++++ L +
Sbjct: 8 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKFKQN---- 63
Query: 81 SVCPDPLYSDVEISNYASRLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFK 140
P+ + S + R++N+D+ P+ L ++++ + + Y++FK
Sbjct: 64 -----PISKEERESKFGK------DRDWNVDLI-PKFLMANGELTNILIHTDVTRYVDFK 111
Query: 141 SIDATFM 147
+ +++
Sbjct: 112 QVSGSYV 118
>SGD|S000005897 [details] [associations]
symbol:MRS6 "Rab escort protein" species:4932 "Saccharomyces
cerevisiae" [GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=IMP;IDA] [GO:0032858 "activation of Rab GTPase activity"
evidence=IMP] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IMP] [GO:0005968 "Rab-protein geranylgeranyltransferase
complex" evidence=IDA] [GO:0006612 "protein targeting to membrane"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005096 "GTPase activator activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0018344
"protein geranylgeranylation" evidence=IMP] [GO:0017137 "Rab GTPase
binding" evidence=IMP] InterPro:IPR000632 PRINTS:PR00894
SGD:S000005897 Pfam:PF00996 EMBL:BK006948 GO:GO:0016020
GO:GO:0005096 GO:GO:0006612 GO:GO:0006888 GO:GO:0017137
GO:GO:0018344 eggNOG:COG5044 InterPro:IPR018203 PRINTS:PR00891
GO:GO:0005968 EMBL:D26441 EMBL:X70339 EMBL:Z75278 EMBL:M90844
PIR:S47917 RefSeq:NP_015015.1 ProteinModelPortal:P32864 SMR:P32864
DIP:DIP-2246N IntAct:P32864 MINT:MINT-481776 STRING:P32864
PaxDb:P32864 PeptideAtlas:P32864 EnsemblFungi:YOR370C GeneID:854552
KEGG:sce:YOR370C CYGD:YOR370c HOGENOM:HOG000248782 OMA:SLSNFHT
OrthoDB:EOG4BP4M5 NextBio:976973 Genevestigator:P32864
GermOnline:YOR370C GO:GO:0032858 InterPro:IPR017230
PIRSF:PIRSF037514 Uniprot:P32864
Length = 603
Score = 231 (86.4 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 69/241 (28%), Positives = 126/241 (52%)
Query: 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVC 83
D+++ GTG+ ESV++AA + G +VLH+D N +YG ++L++ + ++N + S C
Sbjct: 48 DVLIAGTGMVESVLAAALAWQGSNVLHIDKNDYYGDTSATLTVDQIKRWVNEVNEGSVSC 107
Query: 84 PDPLYSDVEISNYASRLLSQ---HPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFK 140
Y + ++ Y S L+ R+F +D+S P++LF + +++KS YLEF+
Sbjct: 108 ----YKNAKL--YVSTLIGSGKYSSRDFGIDLS-PKILFAKSDLLSILIKSRVHQYLEFQ 160
Query: 141 SIDA--TFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENN 198
S+ T+ D KL + ++ IF D++L LM K LM+F K V L+ + E
Sbjct: 161 SLSNFHTYENDCFEKLTN---TKQEIFTDQNLPLMTKRNLMKFIKFV---LNWEAQTE-- 212
Query: 199 VRISEEDLDSPFAEFL-TKMKLPHKIKSIVLYAIAMA-DYDQEVSEYVLKTRDGINRLAL 256
I + + ++FL K KL ++++I + D + +V E + + R + +
Sbjct: 213 --IWQPYAERTMSDFLGEKFKLEKPQVFELIFSIGLCYDLNVKVPEALQRIRRYLTSFDV 270
Query: 257 Y 257
Y
Sbjct: 271 Y 271
Score = 196 (74.1 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 75/262 (28%), Positives = 120/262 (45%)
Query: 96 YASRLLSQ---HPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDA--TFMLDA 150
Y S L+ R+F +D+S P++LF + +++KS YLEF+S+ T+ D
Sbjct: 114 YVSTLIGSGKYSSRDFGIDLS-PKILFAKSDLLSILIKSRVHQYLEFQSLSNFHTYENDC 172
Query: 151 DAKLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPF 210
KL + ++ IF D++L LM K LM+F K V L+ + E I + +
Sbjct: 173 FEKLTN---TKQEIFTDQNLPLMTKRNLMKFIKFV---LNWEAQTE----IWQPYAERTM 222
Query: 211 AEFL-TKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYNSSIGRFQNALG 269
++FL K KL ++++I + YD V K + + R+ Y +S +
Sbjct: 223 SDFLGEKFKLEKPQVFELIFSIGLC-YDLNV-----KVPEALQRIRRYLTSFDVY-GPFP 275
Query: 270 ALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDI-LSH 328
AL G GEL Q FCR AAV G Y L ++S + + K G + +S
Sbjct: 276 ALCSKYGGPGELSQGFCRSAAVGGATYKLNEKLVSF-----NPTTKVATFQDGSKVEVSE 330
Query: 329 KLVLDPSFTVPGSLASSHQQLQ 350
K+++ P+ S QQ Q
Sbjct: 331 KVIISPTQAPKDSKHVPQQQYQ 352
>ASPGD|ASPL0000003017 [details] [associations]
symbol:gdiA species:162425 "Emericella nidulans"
[GO:0015031 "protein transport" evidence=IEA] [GO:0005093 "Rab
GDP-dissociation inhibitor activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0032153 "cell division site"
evidence=IEA] InterPro:IPR000806 PRINTS:PR00892 Pfam:PF00996
GO:GO:0015031 EMBL:BN001301 EMBL:AACD01000101 eggNOG:COG5044
HOGENOM:HOG000163825 OMA:FGLDKNT OrthoDB:EOG4XSPZC GO:GO:0005093
InterPro:IPR018203 PRINTS:PR00891 RefSeq:XP_663499.1
ProteinModelPortal:Q5B0N5 SMR:Q5B0N5 STRING:Q5B0N5
EnsemblFungi:CADANIAT00007138 GeneID:2870706 KEGG:ani:AN5895.2
Uniprot:Q5B0N5
Length = 468
Score = 218 (81.8 bits), Expect = 2.9e-15, P = 2.9e-15
Identities = 63/252 (25%), Positives = 120/252 (47%)
Query: 107 NFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDAD---AKLCSVPDSRAA 163
++N+D+ P++L ++++ + + YLEFK I +++ A + VP
Sbjct: 76 DWNVDLV-PKLLMANGELTNILVSTDVTRYLEFKQIAGSYVQQGKGPKATVAKVPSDAGE 134
Query: 164 IFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKI 223
+ +G+ EK + +F + V D S + I+ + + +F L
Sbjct: 135 ALRSSLMGMFEKRRAKKFLEWVGEFKEDDPSTHQGLNIATCTMKDVYDKF----SLEDNT 190
Query: 224 KSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQ 283
+ V +++A+ D ++ + D INR+ LY +S+ R+ + IYP+YG GELPQ
Sbjct: 191 RDFVGHSMALYQDDDYINRPGTAS-DAINRIRLYVNSMARYGKS--PYIYPLYGLGELPQ 247
Query: 284 AFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLA-----SGQDIL-----SHKLVLD 333
F R +A+ G Y+L + +L D+N G G++ G + + + K++ D
Sbjct: 248 GFARLSAIYGGTYMLNTDIDEVLYDEN-GKVSGIKATMKDREDGGETMKFETKTKKIIAD 306
Query: 334 PSFTVPGSLASS 345
PS+ PG ++ S
Sbjct: 307 PSY-FPGKVSVS 317
Score = 118 (46.6 bits), Expect = 0.00049, P = 0.00049
Identities = 60/243 (24%), Positives = 98/243 (40%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSV 82
+D+IV+GTGL E V+S S G VLH+D N YG +S++I L F +
Sbjct: 8 YDVIVLGTGLTECVLSGVLSVKGNKVLHIDRNDHYGGEAASVNIETL--FKKYGNVRPGE 65
Query: 83 CPDPLYSDVEISNYASRLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEF-KS 141
P Y ++++ L+ P+ + +L D L K A Y++ K
Sbjct: 66 EPWKKYG--RVNDWNVDLV---PKLLMANGELTNILVSTDVTRYLEFKQIAGSYVQQGKG 120
Query: 142 IDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENNVRI 201
AT AK VP + +G+ EK + +F + V D S + I
Sbjct: 121 PKATV-----AK---VPSDAGEALRSSLMGMFEKRRAKKFLEWVGEFKEDDPSTHQGLNI 172
Query: 202 SEEDLDSPFAEFLTKMKLPHKI-KSIVLYAIAMADYDQE---VSEYVLKTRDGINRLALY 257
+ + + +F + + S+ LY DY S+ + + R +N +A Y
Sbjct: 173 ATCTMKDVYDKFSLEDNTRDFVGHSMALYQDD--DYINRPGTASDAINRIRLYVNSMARY 230
Query: 258 NSS 260
S
Sbjct: 231 GKS 233
>UNIPROTKB|G5E9U5 [details] [associations]
symbol:GDI1 "GDP dissociation inhibitor 1, isoform CRA_a"
species:9606 "Homo sapiens" [GO:0005093 "Rab GDP-dissociation
inhibitor activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR000806 PRINTS:PR00892 Pfam:PF00996
GO:GO:0015031 EMBL:CH471172 GO:GO:0005093 InterPro:IPR018203
PRINTS:PR00891 EMBL:BX936385 UniGene:Hs.595950 UniGene:Hs.74576
HGNC:HGNC:4226 ChiTaRS:GDI1 ProteinModelPortal:G5E9U5 SMR:G5E9U5
PRIDE:G5E9U5 Ensembl:ENST00000434049 ArrayExpress:G5E9U5
Bgee:G5E9U5 Uniprot:G5E9U5
Length = 147
Score = 127 (49.8 bits), Expect = 5.9e-13, Sum P(2) = 5.9e-13
Identities = 22/43 (51%), Positives = 32/43 (74%)
Query: 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS 65
+D+IV+GTGL E ++S S +GK VLH+D NP+YG SS++
Sbjct: 5 YDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSIT 47
Score = 72 (30.4 bits), Expect = 5.9e-13, Sum P(2) = 5.9e-13
Identities = 20/82 (24%), Positives = 42/82 (51%)
Query: 80 SSVCP-DPLYSDVEISNYASRLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLE 138
SS+ P + LY ++ + + R++N+D+ P+ L V ++L + + YL+
Sbjct: 44 SSITPLEELYKRFQLLEGPPESMGRG-RDWNVDLI-PKFLMANGQLVKMLLYTEVTRYLD 101
Query: 139 FKSIDATFMLDADAKLCSVPDS 160
FK ++ +F+ K+ VP +
Sbjct: 102 FKVVEGSFVYKG-GKIYKVPST 122
>UNIPROTKB|Q5SX91 [details] [associations]
symbol:GDI2 "Rab GDP dissociation inhibitor beta"
species:9606 "Homo sapiens" [GO:0005093 "Rab GDP-dissociation
inhibitor activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR000806 PRINTS:PR00892 Pfam:PF00996
GO:GO:0015031 GO:GO:0005093 InterPro:IPR018203 PRINTS:PR00891
HOVERGEN:HBG000839 EMBL:AL596094 UniGene:Hs.299055 HGNC:HGNC:4227
ChiTaRS:GDI2 SMR:Q5SX91 Ensembl:ENST00000447751
HOGENOM:HOG000171762 Uniprot:Q5SX91
Length = 203
Score = 153 (58.9 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 39/121 (32%), Positives = 65/121 (53%)
Query: 216 KMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPI 275
K L + +A+A+ D + + +T INR+ LY+ S+ R+ + +YP+
Sbjct: 2 KFDLGQDVIDFTGHALALYRTDDYLDQPCYET---INRIKLYSESLARYGKS--PYLYPL 56
Query: 276 YGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPS 335
YG GELPQ F R +A+ G Y+L P+ ++ QN G GV+ + G+ +L+ DPS
Sbjct: 57 YGLGELPQGFARLSAIYGGTYMLNKPIEEIIV-QN-GKVIGVK-SEGEIARCKQLICDPS 113
Query: 336 F 336
+
Sbjct: 114 Y 114
Score = 38 (18.4 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 13/51 (25%), Positives = 22/51 (43%)
Query: 340 GSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKP--DLSNFLVIFP 388
G +A Q + + + G+V R ICI +K D ++ +I P
Sbjct: 100 GEIARCKQLICDPSYVKDRVEKVGQVIRVICILSHPIKNTNDANSCQIIIP 150
>UNIPROTKB|F1LWU5 [details] [associations]
symbol:F1LWU5 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005093 "Rab GDP-dissociation inhibitor
activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR000806 PRINTS:PR00892 Pfam:PF00996
GO:GO:0015031 GO:GO:0005093 InterPro:IPR018203 PRINTS:PR00891
GeneTree:ENSGT00530000063044 IPI:IPI00950695
Ensembl:ENSRNOT00000066392 Uniprot:F1LWU5
Length = 317
Score = 114 (45.2 bits), Expect = 0.00070, P = 0.00070
Identities = 50/198 (25%), Positives = 88/198 (44%)
Query: 139 FKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENN 198
FK + F+ K ++P S A + L EK+ +F V + DE + N
Sbjct: 1 FKVNEGGFVYKG-GKFYNIP-SEAEALASSLMELFEKHLFRKFLVYVA---NFDEKDTRN 55
Query: 199 VRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYN 258
+ + + + K L + + IA+ Y+ ++ IN++ LY+
Sbjct: 56 FEGDPKKIST--RDVHKKFDLGQDVIDFTGHFIAL----HRSHCYLDQSCFDINKIKLYS 109
Query: 259 SSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVR 318
S+ R + +Y +YG GELPQ F +A+ G Y+L +P I +T QN G G++
Sbjct: 110 ESLAR--HGKSPYLYSLYG-GELPQGFA--SAIYGGTYMLNIP-IEEITVQN-GKVVGIK 162
Query: 319 LASGQDILSHKLVLDPSF 336
+ G+ +L+ D S+
Sbjct: 163 -SEGEIAHCKQLICDSSY 179
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.396 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 407 391 0.00094 117 3 11 22 0.37 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 68
No. of states in DFA: 611 (65 KB)
Total size of DFA: 235 KB (2128 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.73u 0.13s 33.86t Elapsed: 00:00:02
Total cpu time: 33.74u 0.13s 33.87t Elapsed: 00:00:02
Start: Fri May 10 23:39:24 2013 End: Fri May 10 23:39:26 2013