Query 015413
Match_columns 407
No_of_seqs 309 out of 1951
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 12:11:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015413.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015413hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3p1w_A Rabgdi protein; GDI RAB 100.0 3.5E-46 1.2E-50 370.3 35.8 341 19-404 17-370 (475)
2 1vg0_A RAB proteins geranylger 100.0 1E-44 3.4E-49 369.3 36.0 351 21-403 7-492 (650)
3 2bcg_G Secretory pathway GDP d 100.0 1.6E-35 5.5E-40 295.8 33.9 324 20-391 9-338 (453)
4 1d5t_A Guanine nucleotide diss 100.0 6.8E-34 2.3E-38 282.4 32.4 321 20-391 4-327 (433)
5 4dgk_A Phytoene dehydrogenase; 100.0 6.5E-32 2.2E-36 273.0 24.0 296 23-377 2-318 (501)
6 1s3e_A Amine oxidase [flavin-c 100.0 1.1E-28 3.8E-33 250.6 24.8 299 21-380 3-309 (520)
7 2yg5_A Putrescine oxidase; oxi 100.0 6.4E-28 2.2E-32 240.7 20.6 295 20-379 3-308 (453)
8 2vvm_A Monoamine oxidase N; FA 99.9 3.5E-27 1.2E-31 238.1 20.2 296 23-377 40-350 (495)
9 2ivd_A PPO, PPOX, protoporphyr 99.9 7.6E-27 2.6E-31 234.5 22.2 287 22-379 16-332 (478)
10 3nks_A Protoporphyrinogen oxid 99.9 6.4E-26 2.2E-30 227.6 19.1 297 23-385 3-334 (477)
11 3ka7_A Oxidoreductase; structu 99.9 5E-25 1.7E-29 217.8 24.2 277 23-377 1-293 (425)
12 3lov_A Protoporphyrinogen oxid 99.9 3.3E-25 1.1E-29 222.5 21.3 289 20-377 2-322 (475)
13 3i6d_A Protoporphyrinogen oxid 99.9 1.4E-25 5E-30 224.2 17.9 286 22-379 5-325 (470)
14 1sez_A Protoporphyrinogen oxid 99.9 2.9E-25 1E-29 224.4 20.3 295 20-378 11-347 (504)
15 3nrn_A Uncharacterized protein 99.9 9.4E-25 3.2E-29 215.8 21.6 274 23-376 1-280 (421)
16 1rsg_A FMS1 protein; FAD bindi 99.9 2.2E-25 7.5E-30 226.1 15.5 288 20-386 6-315 (516)
17 4gde_A UDP-galactopyranose mut 99.9 1.7E-24 5.7E-29 219.1 17.0 294 22-389 10-323 (513)
18 2iid_A L-amino-acid oxidase; f 99.9 9.5E-24 3.3E-28 213.1 17.8 286 21-379 32-338 (498)
19 1b37_A Protein (polyamine oxid 99.9 3.5E-23 1.2E-27 207.6 20.0 296 21-388 3-322 (472)
20 3k7m_X 6-hydroxy-L-nicotine ox 99.9 1.5E-22 5.2E-27 200.4 20.9 287 22-377 1-297 (431)
21 4dsg_A UDP-galactopyranose mut 99.9 5.2E-22 1.8E-26 199.5 16.4 281 21-376 8-309 (484)
22 2jae_A L-amino acid oxidase; o 99.9 2.7E-21 9.3E-26 194.6 16.6 305 21-378 10-333 (489)
23 2b9w_A Putative aminooxidase; 99.9 1E-20 3.4E-25 186.9 18.8 273 21-366 5-282 (424)
24 4gut_A Lysine-specific histone 99.8 2.1E-19 7.3E-24 188.8 20.6 277 20-378 334-626 (776)
25 2z3y_A Lysine-specific histone 99.8 1.3E-18 4.5E-23 181.1 23.1 103 269-379 391-502 (662)
26 2xag_A Lysine-specific histone 99.8 1.1E-18 3.8E-23 184.6 20.6 103 269-379 562-673 (852)
27 1v0j_A UDP-galactopyranose mut 99.8 2E-20 6.8E-25 183.5 6.0 270 21-390 6-286 (399)
28 3ayj_A Pro-enzyme of L-phenyla 99.8 4E-19 1.4E-23 183.4 15.3 108 271-380 339-496 (721)
29 1i8t_A UDP-galactopyranose mut 99.8 3.7E-19 1.3E-23 172.4 9.0 264 22-389 1-271 (367)
30 2e1m_A L-glutamate oxidase; L- 99.8 1.9E-17 6.4E-22 159.9 18.1 240 20-308 42-346 (376)
31 2bi7_A UDP-galactopyranose mut 99.7 1E-17 3.5E-22 163.2 13.3 216 20-306 1-224 (384)
32 3hdq_A UDP-galactopyranose mut 99.7 7.5E-18 2.5E-22 164.0 12.0 273 19-402 26-309 (397)
33 3qj4_A Renalase; FAD/NAD(P)-bi 99.7 1.3E-16 4.4E-21 153.0 18.4 101 271-377 104-205 (342)
34 1yvv_A Amine oxidase, flavin-c 99.4 2.7E-12 9.1E-17 122.1 17.2 94 272-378 103-198 (336)
35 3dme_A Conserved exported prot 99.3 8.1E-12 2.8E-16 120.0 12.7 53 278-332 149-203 (369)
36 3dje_A Fructosyl amine: oxygen 99.3 5.7E-11 1.9E-15 117.4 17.6 60 271-332 149-215 (438)
37 3ps9_A TRNA 5-methylaminomethy 99.2 1.2E-10 4.3E-15 121.4 16.8 59 271-332 406-467 (676)
38 3nyc_A D-arginine dehydrogenas 99.2 1.2E-10 4.3E-15 112.3 15.1 58 271-332 143-203 (381)
39 4at0_A 3-ketosteroid-delta4-5a 99.2 4.6E-10 1.6E-14 113.2 19.4 42 21-62 40-81 (510)
40 3kkj_A Amine oxidase, flavin-c 99.2 9.4E-12 3.2E-16 113.3 5.2 46 23-68 3-48 (336)
41 3nlc_A Uncharacterized protein 99.2 1.1E-09 3.6E-14 110.8 18.3 53 279-333 220-272 (549)
42 3pvc_A TRNA 5-methylaminomethy 99.2 4.3E-10 1.5E-14 117.5 15.9 59 271-332 401-463 (689)
43 3v76_A Flavoprotein; structura 99.1 1.6E-10 5.6E-15 113.4 11.4 58 271-332 124-181 (417)
44 1y0p_A Fumarate reductase flav 99.1 3.1E-09 1.1E-13 108.6 21.1 53 279-332 255-311 (571)
45 1qo8_A Flavocytochrome C3 fuma 99.1 2.2E-09 7.6E-14 109.6 19.6 59 272-332 240-306 (566)
46 2gag_B Heterotetrameric sarcos 99.1 2.8E-09 9.6E-14 103.7 19.4 59 271-332 163-224 (405)
47 2i0z_A NAD(FAD)-utilizing dehy 99.1 9.8E-10 3.4E-14 108.9 16.1 60 271-332 125-185 (447)
48 1y56_B Sarcosine oxidase; dehy 99.1 1.9E-09 6.4E-14 104.3 16.4 59 271-332 138-199 (382)
49 1pj5_A N,N-dimethylglycine oxi 99.0 4.7E-09 1.6E-13 112.0 16.1 59 271-332 140-201 (830)
50 1d4d_A Flavocytochrome C fumar 99.0 2.5E-08 8.6E-13 101.9 20.1 52 279-332 255-311 (572)
51 3oz2_A Digeranylgeranylglycero 99.0 3.8E-10 1.3E-14 109.2 5.1 42 20-61 2-43 (397)
52 3fpz_A Thiazole biosynthetic e 98.8 3.9E-09 1.3E-13 100.1 5.0 42 22-63 65-108 (326)
53 4fk1_A Putative thioredoxin re 98.7 6.2E-09 2.1E-13 97.5 5.2 42 19-61 3-44 (304)
54 3itj_A Thioredoxin reductase 1 98.7 5.7E-09 1.9E-13 98.8 4.8 60 4-63 4-67 (338)
55 4gcm_A TRXR, thioredoxin reduc 98.7 1.4E-08 4.9E-13 95.3 5.3 40 22-62 6-45 (312)
56 3lxd_A FAD-dependent pyridine 98.7 1.3E-07 4.5E-12 92.6 12.3 55 278-334 193-247 (415)
57 3cgv_A Geranylgeranyl reductas 98.6 1.6E-08 5.5E-13 98.0 5.1 42 20-61 2-43 (397)
58 4a5l_A Thioredoxin reductase; 98.6 1.9E-08 6.5E-13 94.3 5.3 36 21-56 3-38 (314)
59 1ryi_A Glycine oxidase; flavop 98.6 2.2E-08 7.5E-13 96.7 5.7 58 271-332 153-213 (382)
60 3rp8_A Flavoprotein monooxygen 98.6 2E-08 7E-13 98.0 5.0 53 7-59 8-60 (407)
61 3fg2_P Putative rubredoxin red 98.6 9.3E-07 3.2E-11 86.2 16.5 56 277-334 182-237 (404)
62 2gqf_A Hypothetical protein HI 98.6 1.7E-08 5.8E-13 98.5 3.9 43 20-62 2-44 (401)
63 4a9w_A Monooxygenase; baeyer-v 98.6 2.8E-08 9.6E-13 94.5 5.3 44 20-63 1-44 (357)
64 3urh_A Dihydrolipoyl dehydroge 98.6 2.2E-08 7.5E-13 100.4 4.2 52 11-63 15-66 (491)
65 3i3l_A Alkylhalidase CMLS; fla 98.6 4E-08 1.4E-12 100.5 6.2 53 8-60 9-61 (591)
66 2oln_A NIKD protein; flavoprot 98.6 3.9E-08 1.3E-12 95.6 5.6 58 271-332 142-202 (397)
67 3k30_A Histamine dehydrogenase 98.6 4.9E-08 1.7E-12 102.0 6.6 61 2-63 372-432 (690)
68 2gjc_A Thiazole biosynthetic e 98.6 8E-08 2.7E-12 90.4 6.9 41 22-62 65-107 (326)
69 1rp0_A ARA6, thiazole biosynth 98.6 4.2E-08 1.5E-12 91.1 4.9 41 21-61 38-79 (284)
70 2zbw_A Thioredoxin reductase; 98.5 3.8E-08 1.3E-12 93.2 4.4 43 20-62 3-45 (335)
71 3da1_A Glycerol-3-phosphate de 98.5 4.5E-08 1.6E-12 99.7 5.2 60 271-332 160-226 (561)
72 3o0h_A Glutathione reductase; 98.5 3.5E-08 1.2E-12 98.8 4.1 51 279-332 232-282 (484)
73 3l8k_A Dihydrolipoyl dehydroge 98.5 3.7E-08 1.3E-12 98.0 4.1 43 21-63 3-45 (466)
74 3ab1_A Ferredoxin--NADP reduct 98.5 4.6E-08 1.6E-12 93.8 4.4 44 19-62 11-54 (360)
75 4ap3_A Steroid monooxygenase; 98.5 4.8E-08 1.6E-12 99.2 4.8 48 19-66 18-65 (549)
76 1c0p_A D-amino acid oxidase; a 98.5 9.5E-08 3.2E-12 91.7 6.1 39 21-59 5-43 (363)
77 2uzz_A N-methyl-L-tryptophan o 98.5 7.1E-08 2.4E-12 92.7 5.2 50 279-332 149-198 (372)
78 3axb_A Putative oxidoreductase 98.5 6.3E-08 2.2E-12 95.7 4.6 51 279-332 181-248 (448)
79 3nix_A Flavoprotein/dehydrogen 98.5 8.9E-08 3.1E-12 93.6 5.6 38 21-58 4-41 (421)
80 3c96_A Flavin-containing monoo 98.5 8.4E-08 2.9E-12 93.7 5.3 42 20-61 2-44 (410)
81 3jsk_A Cypbp37 protein; octame 98.5 8.7E-08 3E-12 90.7 5.0 41 22-62 79-121 (344)
82 2qcu_A Aerobic glycerol-3-phos 98.5 9.8E-08 3.3E-12 95.9 5.6 52 278-332 148-204 (501)
83 2vdc_G Glutamate synthase [NAD 98.5 1.2E-07 4E-12 94.1 6.1 44 19-62 119-162 (456)
84 3lzw_A Ferredoxin--NADP reduct 98.5 5.7E-08 1.9E-12 91.6 3.7 42 21-62 6-47 (332)
85 3cty_A Thioredoxin reductase; 98.5 1.1E-07 3.7E-12 89.5 5.3 42 21-63 15-56 (319)
86 1w4x_A Phenylacetone monooxyge 98.5 1.1E-07 3.6E-12 96.6 5.5 44 20-63 14-57 (542)
87 2xdo_A TETX2 protein; tetracyc 98.5 1.3E-07 4.4E-12 92.0 5.9 41 20-60 24-64 (398)
88 2gf3_A MSOX, monomeric sarcosi 98.5 1.4E-07 4.7E-12 91.2 6.0 50 279-332 150-199 (389)
89 4dna_A Probable glutathione re 98.5 7.6E-08 2.6E-12 95.7 4.2 52 278-332 210-262 (463)
90 3f8d_A Thioredoxin reductase ( 98.5 1.3E-07 4.6E-12 88.6 5.5 40 22-63 15-54 (323)
91 2gv8_A Monooxygenase; FMO, FAD 98.4 1.5E-07 5.2E-12 93.1 6.1 44 20-63 4-49 (447)
92 3alj_A 2-methyl-3-hydroxypyrid 98.4 1.4E-07 4.7E-12 91.2 5.5 40 20-59 9-48 (379)
93 2cul_A Glucose-inhibited divis 98.4 1.3E-07 4.4E-12 85.0 4.8 36 20-55 1-36 (232)
94 2q7v_A Thioredoxin reductase; 98.4 1.4E-07 4.9E-12 88.9 5.2 43 20-63 6-48 (325)
95 3lad_A Dihydrolipoamide dehydr 98.4 1.3E-07 4.4E-12 94.3 5.1 41 21-61 2-42 (476)
96 1mo9_A ORF3; nucleotide bindin 98.4 2E-07 6.8E-12 94.2 5.9 44 19-62 40-83 (523)
97 3r9u_A Thioredoxin reductase; 98.4 1.4E-07 5E-12 88.0 4.5 42 21-63 3-45 (315)
98 3uox_A Otemo; baeyer-villiger 98.4 1.8E-07 6.1E-12 94.9 5.2 47 20-66 7-53 (545)
99 3gwf_A Cyclohexanone monooxyge 98.4 1.5E-07 5.1E-12 95.4 4.5 47 20-66 6-53 (540)
100 2vou_A 2,6-dihydroxypyridine h 98.4 2.2E-07 7.5E-12 90.4 5.5 38 20-57 3-40 (397)
101 3d1c_A Flavin-containing putat 98.4 1.8E-07 6.3E-12 89.6 4.8 43 20-63 2-45 (369)
102 3dk9_A Grase, GR, glutathione 98.4 1.3E-07 4.3E-12 94.5 3.7 43 20-63 18-60 (478)
103 2r0c_A REBC; flavin adenine di 98.4 2.6E-07 9E-12 93.8 5.8 40 21-60 25-64 (549)
104 1v59_A Dihydrolipoamide dehydr 98.4 1.2E-07 4.1E-12 94.7 3.2 44 20-63 3-46 (478)
105 2wdq_A Succinate dehydrogenase 98.4 1.9E-07 6.4E-12 95.6 4.6 53 279-332 143-200 (588)
106 2x3n_A Probable FAD-dependent 98.4 3E-07 1E-11 89.4 5.6 37 21-57 5-41 (399)
107 3qfa_A Thioredoxin reductase 1 98.4 2.5E-07 8.4E-12 93.4 5.1 43 21-63 31-81 (519)
108 2a87_A TRXR, TR, thioredoxin r 98.4 2.3E-07 7.9E-12 87.9 4.7 43 19-62 11-53 (335)
109 3e1t_A Halogenase; flavoprotei 98.4 2.8E-07 9.6E-12 92.8 5.5 38 20-57 5-42 (512)
110 3ces_A MNMG, tRNA uridine 5-ca 98.4 2.1E-07 7.2E-12 95.1 4.6 48 11-58 16-65 (651)
111 3c4n_A Uncharacterized protein 98.3 2.8E-07 9.6E-12 89.9 5.2 40 21-60 35-76 (405)
112 2qae_A Lipoamide, dihydrolipoy 98.3 2.2E-07 7.6E-12 92.4 4.3 42 22-63 2-43 (468)
113 1vdc_A NTR, NADPH dependent th 98.3 2.1E-07 7.1E-12 87.9 3.9 44 20-63 6-53 (333)
114 1dxl_A Dihydrolipoamide dehydr 98.3 2.8E-07 9.5E-12 91.7 5.0 44 20-63 4-47 (470)
115 3dgz_A Thioredoxin reductase 2 98.3 2.8E-07 9.6E-12 92.2 5.0 43 21-63 5-55 (488)
116 2bs2_A Quinol-fumarate reducta 98.3 2.3E-07 8E-12 95.9 4.5 52 279-332 158-214 (660)
117 3atr_A Conserved archaeal prot 98.3 1.8E-07 6.1E-12 92.7 3.5 37 21-57 5-41 (453)
118 1zmd_A Dihydrolipoyl dehydroge 98.3 2.3E-07 7.7E-12 92.5 4.2 44 20-63 4-47 (474)
119 1ojt_A Surface protein; redox- 98.3 2.1E-07 7.2E-12 93.0 4.0 43 20-62 4-46 (482)
120 1trb_A Thioredoxin reductase; 98.3 2.3E-07 8E-12 87.0 4.0 42 20-62 3-44 (320)
121 2a8x_A Dihydrolipoyl dehydroge 98.3 2.2E-07 7.4E-12 92.4 4.0 42 20-62 1-42 (464)
122 2rgh_A Alpha-glycerophosphate 98.3 3.7E-07 1.3E-11 93.1 5.8 60 271-332 178-244 (571)
123 1o94_A Tmadh, trimethylamine d 98.3 3.2E-07 1.1E-11 96.4 5.4 44 20-63 387-430 (729)
124 3ic9_A Dihydrolipoamide dehydr 98.3 2.1E-07 7E-12 93.3 3.8 40 22-62 8-47 (492)
125 2gmh_A Electron transfer flavo 98.3 3.1E-07 1.1E-11 94.0 5.1 39 22-60 35-79 (584)
126 3pl8_A Pyranose 2-oxidase; sub 98.3 4E-07 1.4E-11 93.7 5.8 42 21-62 45-86 (623)
127 2bry_A NEDD9 interacting prote 98.3 3.4E-07 1.2E-11 91.8 5.1 41 20-60 90-130 (497)
128 2yqu_A 2-oxoglutarate dehydrog 98.3 2.6E-07 8.9E-12 91.6 4.2 42 22-63 1-42 (455)
129 2zxi_A TRNA uridine 5-carboxym 98.3 3.7E-07 1.3E-11 93.0 5.3 48 12-59 15-65 (637)
130 2q0l_A TRXR, thioredoxin reduc 98.3 4.1E-07 1.4E-11 85.0 5.3 41 22-63 1-42 (311)
131 1zk7_A HGII, reductase, mercur 98.3 3.1E-07 1.1E-11 91.3 4.7 42 20-62 2-43 (467)
132 2qa1_A PGAE, polyketide oxygen 98.3 4.8E-07 1.7E-11 90.8 6.1 40 20-59 9-48 (500)
133 3ihg_A RDME; flavoenzyme, anth 98.3 5.1E-07 1.7E-11 91.4 6.3 38 21-58 4-41 (535)
134 1chu_A Protein (L-aspartate ox 98.3 3.6E-07 1.2E-11 92.6 5.1 40 21-61 7-46 (540)
135 2r9z_A Glutathione amide reduc 98.3 3.2E-07 1.1E-11 91.2 4.4 51 279-332 207-258 (463)
136 2hqm_A GR, grase, glutathione 98.3 2.9E-07 9.9E-12 91.9 4.1 42 20-62 9-50 (479)
137 3dgh_A TRXR-1, thioredoxin red 98.3 4.4E-07 1.5E-11 90.7 5.1 53 279-333 227-284 (483)
138 1ges_A Glutathione reductase; 98.3 3.3E-07 1.1E-11 90.8 4.0 51 280-332 209-259 (450)
139 2h88_A Succinate dehydrogenase 98.3 4E-07 1.4E-11 93.5 4.7 52 279-332 155-211 (621)
140 3g3e_A D-amino-acid oxidase; F 98.3 3.2E-07 1.1E-11 87.6 3.7 37 23-59 1-43 (351)
141 3gyx_A Adenylylsulfate reducta 98.3 6.6E-07 2.2E-11 92.5 6.0 52 279-332 166-227 (662)
142 3fmw_A Oxygenase; mithramycin, 98.3 7.1E-07 2.4E-11 91.0 5.8 37 22-58 49-85 (570)
143 1fec_A Trypanothione reductase 98.3 4.6E-07 1.6E-11 90.7 4.4 52 279-332 231-282 (490)
144 2eq6_A Pyruvate dehydrogenase 98.3 4.2E-07 1.4E-11 90.4 4.0 42 20-62 4-45 (464)
145 1k0i_A P-hydroxybenzoate hydro 98.2 5.1E-07 1.7E-11 87.5 4.4 35 22-56 2-36 (394)
146 3cp8_A TRNA uridine 5-carboxym 98.2 5.8E-07 2E-11 91.8 4.9 46 15-60 14-60 (641)
147 3fbs_A Oxidoreductase; structu 98.2 6E-07 2.1E-11 83.0 4.6 38 22-59 2-39 (297)
148 2qa2_A CABE, polyketide oxygen 98.2 7.9E-07 2.7E-11 89.2 5.8 39 21-59 11-49 (499)
149 2wpf_A Trypanothione reductase 98.2 4.8E-07 1.6E-11 90.7 3.8 53 279-333 235-287 (495)
150 1y56_A Hypothetical protein PH 98.2 6.4E-07 2.2E-11 89.7 4.6 42 21-63 107-148 (493)
151 4hb9_A Similarities with proba 98.2 8.7E-07 3E-11 85.9 5.3 35 23-57 2-36 (412)
152 3s5w_A L-ornithine 5-monooxyge 98.2 6.9E-07 2.3E-11 88.6 4.5 41 21-61 29-74 (463)
153 2aqj_A Tryptophan halogenase, 98.2 1.1E-06 3.8E-11 89.0 6.1 51 279-331 165-215 (538)
154 3g5s_A Methylenetetrahydrofola 98.2 1.2E-06 4E-11 83.8 5.8 39 23-61 2-40 (443)
155 3ihm_A Styrene monooxygenase A 98.2 6.7E-07 2.3E-11 88.0 4.3 33 23-55 23-55 (430)
156 2xve_A Flavin-containing monoo 98.2 9.3E-07 3.2E-11 87.9 5.3 41 23-63 3-49 (464)
157 1lvl_A Dihydrolipoamide dehydr 98.2 5.2E-07 1.8E-11 89.5 3.4 42 21-63 4-45 (458)
158 2e4g_A Tryptophan halogenase; 98.2 1.1E-06 3.7E-11 89.3 5.7 51 279-331 194-245 (550)
159 1ebd_A E3BD, dihydrolipoamide 98.2 7E-07 2.4E-11 88.5 4.0 40 22-62 3-42 (455)
160 2dkh_A 3-hydroxybenzoate hydro 98.2 1.6E-06 5.4E-11 89.7 6.8 38 21-58 31-69 (639)
161 3c4a_A Probable tryptophan hyd 98.2 9.7E-07 3.3E-11 85.3 4.9 35 23-57 1-37 (381)
162 1fl2_A Alkyl hydroperoxide red 98.2 1.1E-06 3.9E-11 81.9 5.0 39 22-62 1-39 (310)
163 1ps9_A 2,4-dienoyl-COA reducta 98.2 1.9E-06 6.6E-11 89.6 7.2 42 21-62 372-413 (671)
164 1xdi_A RV3303C-LPDA; reductase 98.2 6.4E-07 2.2E-11 89.9 3.2 50 280-332 224-273 (499)
165 1kf6_A Fumarate reductase flav 98.2 7.2E-07 2.5E-11 91.5 3.5 40 21-60 4-45 (602)
166 2ywl_A Thioredoxin reductase r 98.2 1.5E-06 5.1E-11 74.5 4.9 34 22-55 1-34 (180)
167 2e1m_B L-glutamate oxidase; L- 98.2 4.3E-07 1.5E-11 73.3 1.3 56 323-380 4-60 (130)
168 2e5v_A L-aspartate oxidase; ar 98.2 1.5E-06 5.1E-11 86.5 5.5 36 24-60 1-36 (472)
169 1onf_A GR, grase, glutathione 98.1 1E-06 3.5E-11 88.4 4.2 53 279-333 217-270 (500)
170 4b1b_A TRXR, thioredoxin reduc 98.1 1E-06 3.4E-11 89.1 4.2 52 278-332 262-313 (542)
171 3t37_A Probable dehydrogenase; 98.1 1.2E-06 4E-11 88.4 4.5 36 21-56 16-52 (526)
172 3q9t_A Choline dehydrogenase a 98.1 1.7E-06 5.8E-11 88.1 5.4 37 20-56 4-41 (577)
173 1kdg_A CDH, cellobiose dehydro 98.1 1.6E-06 5.4E-11 88.0 5.1 38 20-57 5-42 (546)
174 2gag_A Heterotetrameric sarcos 98.1 1.8E-06 6.1E-11 93.3 4.9 42 21-62 127-168 (965)
175 3cgb_A Pyridine nucleotide-dis 98.1 2E-06 6.9E-11 85.8 4.7 50 279-332 227-276 (480)
176 1jnr_A Adenylylsulfate reducta 98.1 2.6E-06 8.9E-11 88.1 5.6 52 279-332 151-212 (643)
177 2pyx_A Tryptophan halogenase; 98.1 2.3E-06 7.7E-11 86.5 4.5 51 279-331 175-226 (526)
178 1hyu_A AHPF, alkyl hydroperoxi 98.0 3.3E-06 1.1E-10 85.2 5.4 40 21-62 211-250 (521)
179 1ju2_A HydroxynitrIle lyase; f 98.0 2.1E-06 7E-11 86.9 3.9 38 21-59 25-62 (536)
180 3kd9_A Coenzyme A disulfide re 98.0 2.8E-06 9.7E-11 83.9 4.9 42 20-61 1-44 (449)
181 3ics_A Coenzyme A-disulfide re 98.0 2.8E-06 9.5E-11 87.0 5.0 49 279-332 228-276 (588)
182 1lqt_A FPRA; NADP+ derivative, 98.0 2.1E-06 7.3E-11 85.0 3.9 43 20-62 1-50 (456)
183 3iwa_A FAD-dependent pyridine 98.0 2.5E-06 8.5E-11 84.9 4.1 55 277-334 200-254 (472)
184 2weu_A Tryptophan 5-halogenase 98.0 2.3E-06 8E-11 85.9 3.5 51 279-331 173-223 (511)
185 1pn0_A Phenol 2-monooxygenase; 98.0 3.2E-06 1.1E-10 87.8 4.2 45 21-65 7-58 (665)
186 1gte_A Dihydropyrimidine dehyd 98.0 4.3E-06 1.5E-10 91.0 5.4 41 21-61 186-227 (1025)
187 3qvp_A Glucose oxidase; oxidor 98.0 4.6E-06 1.6E-10 84.9 5.1 38 18-55 15-53 (583)
188 2x8g_A Thioredoxin glutathione 98.0 5E-06 1.7E-10 85.3 5.0 35 20-54 105-139 (598)
189 1cjc_A Protein (adrenodoxin re 97.9 4.5E-06 1.5E-10 82.8 4.3 42 21-62 5-48 (460)
190 1n4w_A CHOD, cholesterol oxida 97.9 6.6E-06 2.3E-10 82.5 5.3 39 20-58 3-41 (504)
191 3oc4_A Oxidoreductase, pyridin 97.9 6.9E-06 2.4E-10 81.2 4.6 51 278-332 188-238 (452)
192 3h28_A Sulfide-quinone reducta 97.9 6.7E-06 2.3E-10 80.7 4.2 39 23-61 3-43 (430)
193 1coy_A Cholesterol oxidase; ox 97.9 1.2E-05 4.2E-10 80.7 6.0 38 20-57 9-46 (507)
194 3fim_B ARYL-alcohol oxidase; A 97.9 7.2E-06 2.5E-10 83.2 4.2 38 22-59 2-40 (566)
195 2cdu_A NADPH oxidase; flavoenz 97.9 8.9E-06 3E-10 80.4 4.7 52 278-332 190-241 (452)
196 1q1r_A Putidaredoxin reductase 97.9 1.3E-05 4.3E-10 78.8 5.7 54 278-333 190-245 (431)
197 3h8l_A NADH oxidase; membrane 97.8 6.5E-06 2.2E-10 80.2 3.3 50 279-335 218-267 (409)
198 1m6i_A Programmed cell death p 97.8 1.1E-05 3.8E-10 80.7 5.1 52 279-333 226-277 (493)
199 2v3a_A Rubredoxin reductase; a 97.8 1.2E-05 4.1E-10 77.6 4.8 52 279-333 187-238 (384)
200 1gpe_A Protein (glucose oxidas 97.8 1.2E-05 4.3E-10 82.0 5.1 38 20-57 22-60 (587)
201 2jbv_A Choline oxidase; alcoho 97.8 1.8E-05 6.2E-10 80.1 5.6 39 21-59 12-51 (546)
202 2bc0_A NADH oxidase; flavoprot 97.8 1.3E-05 4.3E-10 80.2 4.4 50 279-332 236-285 (490)
203 1nhp_A NADH peroxidase; oxidor 97.8 1.4E-05 4.7E-10 78.9 4.6 51 279-333 191-241 (447)
204 2gqw_A Ferredoxin reductase; f 97.7 1.9E-05 6.6E-10 76.9 4.8 49 279-334 187-235 (408)
205 3sx6_A Sulfide-quinone reducta 97.7 2.2E-05 7.6E-10 77.2 4.7 36 22-57 4-42 (437)
206 1xhc_A NADH oxidase /nitrite r 97.7 2.7E-05 9.2E-10 74.8 4.9 35 23-58 9-43 (367)
207 3ntd_A FAD-dependent pyridine 97.7 2.6E-05 8.8E-10 79.3 4.6 36 23-58 2-39 (565)
208 3ef6_A Toluene 1,2-dioxygenase 97.6 3.6E-05 1.2E-09 75.0 5.2 52 279-333 185-236 (410)
209 4b63_A L-ornithine N5 monooxyg 97.5 2.9E-05 1E-09 77.8 1.8 42 20-61 37-78 (501)
210 4g6h_A Rotenone-insensitive NA 97.4 8.3E-05 2.8E-09 74.4 4.6 37 20-56 40-76 (502)
211 3klj_A NAD(FAD)-dependent dehy 97.4 0.00013 4.5E-09 70.4 5.2 38 22-59 9-46 (385)
212 3vrd_B FCCB subunit, flavocyto 97.3 0.00011 3.8E-09 71.1 4.0 37 24-60 4-42 (401)
213 4eqs_A Coenzyme A disulfide re 97.3 0.00015 5E-09 71.3 4.4 48 278-332 187-234 (437)
214 3hyw_A Sulfide-quinone reducta 97.2 0.00017 5.8E-09 70.7 4.2 34 24-57 4-39 (430)
215 1nhp_A NADH peroxidase; oxidor 96.4 0.0037 1.3E-07 61.3 5.9 39 22-60 149-187 (447)
216 3klj_A NAD(FAD)-dependent dehy 96.4 0.0027 9.2E-08 61.1 4.8 39 23-61 147-185 (385)
217 4gcm_A TRXR, thioredoxin reduc 96.2 0.0042 1.4E-07 57.5 4.9 36 24-59 147-182 (312)
218 3fwz_A Inner membrane protein 96.2 0.0068 2.3E-07 49.2 5.6 33 23-55 8-40 (140)
219 1lss_A TRK system potassium up 96.1 0.0054 1.8E-07 49.3 4.8 33 23-55 5-37 (140)
220 2g1u_A Hypothetical protein TM 96.1 0.0061 2.1E-07 50.4 4.9 33 23-55 20-52 (155)
221 1lvl_A Dihydrolipoamide dehydr 95.9 0.0056 1.9E-07 60.3 4.8 37 23-59 172-208 (458)
222 2v3a_A Rubredoxin reductase; a 95.9 0.0074 2.5E-07 57.8 5.5 39 23-61 146-184 (384)
223 2eq6_A Pyruvate dehydrogenase 95.9 0.007 2.4E-07 59.7 5.2 37 23-59 170-206 (464)
224 1id1_A Putative potassium chan 95.9 0.0092 3.1E-07 49.2 5.1 34 22-55 3-36 (153)
225 1ebd_A E3BD, dihydrolipoamide 95.8 0.0074 2.5E-07 59.3 5.2 37 23-59 171-207 (455)
226 2yqu_A 2-oxoglutarate dehydrog 95.8 0.0077 2.6E-07 59.2 5.2 37 23-59 168-204 (455)
227 1v59_A Dihydrolipoamide dehydr 95.8 0.0088 3E-07 59.1 5.6 38 23-60 184-221 (478)
228 3doj_A AT3G25530, dehydrogenas 95.8 0.0083 2.8E-07 55.8 5.1 49 8-56 6-55 (310)
229 1xhc_A NADH oxidase /nitrite r 95.8 0.0077 2.6E-07 57.5 4.9 37 23-59 144-180 (367)
230 3llv_A Exopolyphosphatase-rela 95.8 0.0097 3.3E-07 48.2 4.7 33 23-55 7-39 (141)
231 3c85_A Putative glutathione-re 95.8 0.009 3.1E-07 50.8 4.7 34 22-55 39-73 (183)
232 2gqw_A Ferredoxin reductase; f 95.6 0.011 3.9E-07 57.1 5.5 38 23-60 146-183 (408)
233 4a5l_A Thioredoxin reductase; 95.6 0.011 3.6E-07 54.7 4.8 35 23-57 153-187 (314)
234 1ges_A Glutathione reductase; 95.6 0.011 3.8E-07 58.0 5.2 37 23-59 168-204 (450)
235 4e12_A Diketoreductase; oxidor 95.4 0.017 5.7E-07 53.0 5.3 35 21-55 3-37 (283)
236 3ic5_A Putative saccharopine d 95.4 0.017 5.8E-07 44.7 4.7 32 23-54 6-38 (118)
237 2r9z_A Glutathione amide reduc 95.3 0.015 5E-07 57.4 5.2 37 23-59 167-203 (463)
238 3cgb_A Pyridine nucleotide-dis 95.3 0.011 3.8E-07 58.5 4.1 37 23-59 187-223 (480)
239 1f0y_A HCDH, L-3-hydroxyacyl-C 95.3 0.018 6.3E-07 53.2 5.3 33 23-55 16-48 (302)
240 1q1r_A Putidaredoxin reductase 95.2 0.02 6.8E-07 55.8 5.5 38 23-60 150-187 (431)
241 2bc0_A NADH oxidase; flavoprot 95.2 0.017 6E-07 57.2 5.1 38 23-60 195-232 (490)
242 1zmd_A Dihydrolipoyl dehydroge 95.1 0.019 6.7E-07 56.6 5.4 37 23-59 179-215 (474)
243 2a8x_A Dihydrolipoyl dehydroge 95.1 0.019 6.4E-07 56.5 5.2 37 23-59 172-208 (464)
244 1ryi_A Glycine oxidase; flavop 95.1 0.034 1.2E-06 52.8 6.8 47 13-59 8-54 (382)
245 3k6j_A Protein F01G10.3, confi 95.1 0.025 8.7E-07 55.4 5.9 34 23-56 55-88 (460)
246 1ojt_A Surface protein; redox- 95.1 0.016 5.5E-07 57.3 4.5 37 23-59 186-222 (482)
247 3ic9_A Dihydrolipoamide dehydr 95.0 0.022 7.6E-07 56.5 5.5 38 23-60 175-212 (492)
248 3ef6_A Toluene 1,2-dioxygenase 95.0 0.021 7.2E-07 55.2 5.2 38 23-60 144-181 (410)
249 3ado_A Lambda-crystallin; L-gu 95.0 0.019 6.6E-07 53.5 4.6 34 23-56 7-40 (319)
250 3kd9_A Coenzyme A disulfide re 95.0 0.024 8.3E-07 55.5 5.5 37 24-60 150-186 (449)
251 3d1c_A Flavin-containing putat 94.9 0.021 7.3E-07 53.9 4.7 36 23-58 167-202 (369)
252 1dxl_A Dihydrolipoamide dehydr 94.9 0.017 5.8E-07 56.9 4.0 37 23-59 178-214 (470)
253 2q0l_A TRXR, thioredoxin reduc 94.8 0.025 8.7E-07 52.0 5.0 36 23-58 144-179 (311)
254 2hqm_A GR, grase, glutathione 94.8 0.025 8.7E-07 55.9 5.1 37 23-59 186-222 (479)
255 4e21_A 6-phosphogluconate dehy 94.8 0.025 8.7E-07 53.7 4.9 39 17-55 17-55 (358)
256 3gwf_A Cyclohexanone monooxyge 94.7 0.031 1.1E-06 56.2 5.7 34 23-56 179-212 (540)
257 1onf_A GR, grase, glutathione 94.7 0.027 9.1E-07 56.1 5.1 37 23-59 177-213 (500)
258 3fg2_P Putative rubredoxin red 94.7 0.032 1.1E-06 53.7 5.5 40 23-62 143-182 (404)
259 2hmt_A YUAA protein; RCK, KTN, 94.7 0.025 8.6E-07 45.4 4.0 32 23-54 7-38 (144)
260 3dtt_A NADP oxidoreductase; st 94.6 0.031 1.1E-06 50.0 4.9 37 19-55 16-52 (245)
261 1fl2_A Alkyl hydroperoxide red 94.6 0.029 9.8E-07 51.6 4.8 35 23-57 145-179 (310)
262 3axb_A Putative oxidoreductase 94.6 0.056 1.9E-06 52.7 7.0 41 20-60 21-62 (448)
263 3vtf_A UDP-glucose 6-dehydroge 94.6 0.036 1.2E-06 54.0 5.4 34 22-55 21-54 (444)
264 1zk7_A HGII, reductase, mercur 94.6 0.032 1.1E-06 54.9 5.2 37 23-59 177-213 (467)
265 3lxd_A FAD-dependent pyridine 94.6 0.036 1.2E-06 53.6 5.5 39 23-61 153-191 (415)
266 4eqs_A Coenzyme A disulfide re 94.6 0.026 9.1E-07 55.1 4.5 38 24-61 149-186 (437)
267 2cdu_A NADPH oxidase; flavoenz 94.5 0.032 1.1E-06 54.7 5.1 37 23-59 150-186 (452)
268 2qae_A Lipoamide, dihydrolipoy 94.5 0.033 1.1E-06 54.8 5.2 37 23-59 175-211 (468)
269 1bg6_A N-(1-D-carboxylethyl)-L 94.5 0.031 1.1E-06 52.7 4.9 35 21-55 3-37 (359)
270 3uox_A Otemo; baeyer-villiger 94.5 0.035 1.2E-06 55.9 5.5 35 22-56 185-219 (545)
271 2xve_A Flavin-containing monoo 94.5 0.03 1E-06 55.1 4.8 37 23-59 198-234 (464)
272 1vdc_A NTR, NADPH dependent th 94.5 0.034 1.2E-06 51.7 4.9 36 23-58 160-195 (333)
273 3l4b_C TRKA K+ channel protien 94.4 0.028 9.5E-07 49.2 4.0 32 24-55 2-33 (218)
274 3lk7_A UDP-N-acetylmuramoylala 94.4 0.038 1.3E-06 54.2 5.4 35 22-56 9-43 (451)
275 1pzg_A LDH, lactate dehydrogen 94.4 0.039 1.3E-06 51.7 5.2 33 23-55 10-43 (331)
276 4ap3_A Steroid monooxygenase; 94.4 0.026 9E-07 56.8 4.3 35 22-56 191-225 (549)
277 1trb_A Thioredoxin reductase; 94.4 0.035 1.2E-06 51.2 4.8 36 23-58 146-181 (320)
278 3qsg_A NAD-binding phosphogluc 94.4 0.029 9.9E-07 52.2 4.2 48 7-54 7-57 (312)
279 2a87_A TRXR, TR, thioredoxin r 94.4 0.036 1.2E-06 51.7 4.9 36 23-58 156-191 (335)
280 2q7v_A Thioredoxin reductase; 94.4 0.037 1.3E-06 51.3 4.9 36 23-58 153-188 (325)
281 2dpo_A L-gulonate 3-dehydrogen 94.4 0.035 1.2E-06 51.8 4.7 34 23-56 7-40 (319)
282 3k96_A Glycerol-3-phosphate de 94.3 0.039 1.3E-06 52.4 5.0 36 20-55 27-62 (356)
283 2y0c_A BCEC, UDP-glucose dehyd 94.3 0.036 1.2E-06 54.8 4.9 34 22-55 8-41 (478)
284 2zbw_A Thioredoxin reductase; 94.3 0.035 1.2E-06 51.6 4.6 37 23-59 153-189 (335)
285 2oln_A NIKD protein; flavoprot 94.3 0.11 3.6E-06 49.7 8.0 38 21-58 3-40 (397)
286 3ghy_A Ketopantoate reductase 94.2 0.039 1.3E-06 51.8 4.8 33 22-54 3-35 (335)
287 3ntd_A FAD-dependent pyridine 94.2 0.04 1.4E-06 55.5 5.2 36 24-59 153-188 (565)
288 2gv8_A Monooxygenase; FMO, FAD 94.2 0.038 1.3E-06 54.0 4.8 35 23-57 213-248 (447)
289 3urh_A Dihydrolipoyl dehydroge 94.2 0.041 1.4E-06 54.5 5.0 38 23-60 199-236 (491)
290 3e8x_A Putative NAD-dependent 94.2 0.046 1.6E-06 48.2 4.8 37 19-55 18-55 (236)
291 2ew2_A 2-dehydropantoate 2-red 94.1 0.045 1.5E-06 50.5 4.8 33 23-55 4-36 (316)
292 3da1_A Glycerol-3-phosphate de 94.0 0.062 2.1E-06 54.3 6.1 44 19-62 15-58 (561)
293 3cty_A Thioredoxin reductase; 94.0 0.045 1.5E-06 50.6 4.7 36 23-58 156-191 (319)
294 2raf_A Putative dinucleotide-b 94.0 0.057 1.9E-06 47.0 5.1 34 23-56 20-53 (209)
295 3s5w_A L-ornithine 5-monooxyge 94.0 0.034 1.2E-06 54.5 4.1 36 22-57 227-264 (463)
296 3oc4_A Oxidoreductase, pyridin 94.0 0.054 1.8E-06 53.0 5.5 38 23-60 148-185 (452)
297 3dk9_A Grase, GR, glutathione 94.0 0.05 1.7E-06 53.7 5.2 37 23-59 188-224 (478)
298 3i83_A 2-dehydropantoate 2-red 94.0 0.051 1.7E-06 50.6 4.9 33 23-55 3-35 (320)
299 3l8k_A Dihydrolipoyl dehydroge 94.0 0.08 2.7E-06 52.0 6.6 39 23-61 173-211 (466)
300 1ks9_A KPA reductase;, 2-dehyd 94.0 0.055 1.9E-06 49.3 5.1 33 24-56 2-34 (291)
301 3g79_A NDP-N-acetyl-D-galactos 93.9 0.053 1.8E-06 53.5 5.2 34 23-56 19-54 (478)
302 2cul_A Glucose-inhibited divis 93.9 0.13 4.3E-06 45.4 7.2 51 279-332 68-119 (232)
303 3g0o_A 3-hydroxyisobutyrate de 93.9 0.054 1.8E-06 50.0 4.9 34 22-55 7-40 (303)
304 3itj_A Thioredoxin reductase 1 93.8 0.053 1.8E-06 50.2 4.8 37 23-59 174-210 (338)
305 3cgv_A Geranylgeranyl reductas 93.8 0.085 2.9E-06 50.2 6.3 52 279-332 102-156 (397)
306 3hn2_A 2-dehydropantoate 2-red 93.8 0.051 1.8E-06 50.4 4.6 33 23-55 3-35 (312)
307 4a7p_A UDP-glucose dehydrogena 93.8 0.058 2E-06 52.7 5.1 35 22-56 8-42 (446)
308 2izz_A Pyrroline-5-carboxylate 93.7 0.05 1.7E-06 50.8 4.4 40 16-55 16-59 (322)
309 1mo9_A ORF3; nucleotide bindin 93.7 0.059 2E-06 53.9 5.2 38 23-60 215-252 (523)
310 3gg2_A Sugar dehydrogenase, UD 93.7 0.056 1.9E-06 53.0 4.8 33 23-55 3-35 (450)
311 2x5o_A UDP-N-acetylmuramoylala 93.7 0.039 1.3E-06 53.9 3.6 36 23-58 6-41 (439)
312 3ab1_A Ferredoxin--NADP reduct 93.7 0.059 2E-06 50.7 4.9 37 23-59 164-200 (360)
313 3lad_A Dihydrolipoamide dehydr 93.6 0.066 2.2E-06 52.7 5.2 37 23-59 181-217 (476)
314 2weu_A Tryptophan 5-halogenase 93.5 0.17 5.9E-06 50.2 8.2 34 23-56 3-39 (511)
315 1zcj_A Peroxisomal bifunctiona 93.5 0.071 2.4E-06 52.4 5.2 34 22-55 37-70 (463)
316 2uzz_A N-methyl-L-tryptophan o 93.5 0.15 5E-06 48.1 7.3 41 22-62 2-42 (372)
317 4huj_A Uncharacterized protein 93.4 0.04 1.4E-06 48.3 3.0 37 19-55 20-57 (220)
318 3ics_A Coenzyme A-disulfide re 93.4 0.077 2.6E-06 53.8 5.5 38 23-60 188-225 (588)
319 3qha_A Putative oxidoreductase 93.4 0.065 2.2E-06 49.3 4.6 35 22-56 15-49 (296)
320 1xdi_A RV3303C-LPDA; reductase 93.4 0.069 2.4E-06 53.0 5.0 38 23-60 183-220 (499)
321 2pv7_A T-protein [includes: ch 93.4 0.1 3.5E-06 48.0 5.9 34 23-56 22-56 (298)
322 2gf3_A MSOX, monomeric sarcosi 93.4 0.15 5E-06 48.4 7.1 37 22-58 3-39 (389)
323 3mog_A Probable 3-hydroxybutyr 93.3 0.07 2.4E-06 52.8 4.9 34 22-55 5-38 (483)
324 1hyu_A AHPF, alkyl hydroperoxi 93.3 0.057 1.9E-06 54.0 4.3 36 23-58 356-391 (521)
325 1mv8_A GMD, GDP-mannose 6-dehy 93.3 0.066 2.3E-06 52.2 4.6 32 24-55 2-33 (436)
326 2x8g_A Thioredoxin glutathione 93.3 0.063 2.2E-06 54.6 4.6 31 24-54 288-318 (598)
327 3dfz_A SIRC, precorrin-2 dehyd 93.3 0.081 2.8E-06 46.5 4.7 34 21-54 30-63 (223)
328 2e4g_A Tryptophan halogenase; 93.3 0.17 6E-06 50.8 7.8 44 13-56 16-62 (550)
329 2vns_A Metalloreductase steap3 93.2 0.084 2.9E-06 46.1 4.7 34 22-55 28-61 (215)
330 3atr_A Conserved archaeal prot 93.2 0.17 5.7E-06 49.4 7.4 52 279-332 100-156 (453)
331 3tl2_A Malate dehydrogenase; c 93.1 0.097 3.3E-06 48.7 5.3 37 18-54 4-41 (315)
332 4dio_A NAD(P) transhydrogenase 93.1 0.084 2.9E-06 50.7 4.9 34 23-56 191-224 (405)
333 3pid_A UDP-glucose 6-dehydroge 93.0 0.082 2.8E-06 51.3 4.7 33 23-56 37-69 (432)
334 3f8d_A Thioredoxin reductase ( 93.0 0.086 2.9E-06 48.4 4.8 37 23-59 155-191 (323)
335 1kyq_A Met8P, siroheme biosynt 93.0 0.054 1.8E-06 49.2 3.2 35 21-55 12-46 (274)
336 1zej_A HBD-9, 3-hydroxyacyl-CO 93.0 0.091 3.1E-06 48.3 4.7 33 22-55 12-44 (293)
337 2vdc_G Glutamate synthase [NAD 93.0 0.089 3E-06 51.7 5.0 35 23-57 265-300 (456)
338 2gmh_A Electron transfer flavo 92.9 0.21 7.2E-06 50.6 7.8 53 279-332 144-211 (584)
339 1evy_A Glycerol-3-phosphate de 92.9 0.069 2.4E-06 50.7 4.0 32 24-55 17-48 (366)
340 1t2d_A LDH-P, L-lactate dehydr 92.9 0.11 3.8E-06 48.5 5.3 33 23-55 5-38 (322)
341 2uyy_A N-PAC protein; long-cha 92.9 0.11 3.8E-06 48.1 5.3 35 22-56 30-64 (316)
342 3nix_A Flavoprotein/dehydrogen 92.8 0.16 5.3E-06 48.8 6.5 53 279-332 106-160 (421)
343 2x3n_A Probable FAD-dependent 92.8 0.15 5E-06 48.8 6.3 52 279-332 107-160 (399)
344 1z82_A Glycerol-3-phosphate de 92.8 0.099 3.4E-06 49.0 4.9 32 23-54 15-46 (335)
345 3hwr_A 2-dehydropantoate 2-red 92.8 0.096 3.3E-06 48.7 4.7 33 22-55 19-51 (318)
346 3dfu_A Uncharacterized protein 92.8 0.05 1.7E-06 48.1 2.6 32 23-54 7-38 (232)
347 2rgh_A Alpha-glycerophosphate 92.8 0.19 6.6E-06 50.8 7.3 40 21-60 31-70 (571)
348 2ewd_A Lactate dehydrogenase,; 92.8 0.1 3.4E-06 48.6 4.8 33 23-55 5-38 (317)
349 3r9u_A Thioredoxin reductase; 92.7 0.1 3.4E-06 47.8 4.8 35 23-57 148-182 (315)
350 4g65_A TRK system potassium up 92.7 0.067 2.3E-06 52.6 3.7 33 23-55 4-36 (461)
351 3iwa_A FAD-dependent pyridine 92.7 0.25 8.4E-06 48.5 7.9 38 21-58 2-41 (472)
352 1lld_A L-lactate dehydrogenase 92.7 0.11 3.6E-06 48.3 4.9 33 23-55 8-42 (319)
353 4dll_A 2-hydroxy-3-oxopropiona 92.7 0.11 3.8E-06 48.3 5.0 33 23-55 32-64 (320)
354 3ggo_A Prephenate dehydrogenas 92.7 0.13 4.6E-06 47.7 5.5 33 23-55 34-68 (314)
355 3lzw_A Ferredoxin--NADP reduct 92.6 0.11 3.8E-06 47.9 5.0 37 23-59 155-191 (332)
356 1fec_A Trypanothione reductase 92.6 0.26 8.8E-06 48.7 7.9 43 21-63 2-53 (490)
357 3g17_A Similar to 2-dehydropan 92.6 0.071 2.4E-06 49.0 3.5 33 23-55 3-35 (294)
358 3gpi_A NAD-dependent epimerase 92.6 0.12 4E-06 46.9 5.0 34 23-56 4-37 (286)
359 3pef_A 6-phosphogluconate dehy 92.5 0.11 3.8E-06 47.4 4.7 33 24-56 3-35 (287)
360 2wpf_A Trypanothione reductase 92.5 0.28 9.6E-06 48.5 8.0 43 21-63 6-57 (495)
361 3dgz_A Thioredoxin reductase 2 92.5 0.12 4.3E-06 50.9 5.3 34 23-56 186-219 (488)
362 3p2y_A Alanine dehydrogenase/p 92.4 0.088 3E-06 50.1 4.0 33 23-55 185-217 (381)
363 2zyd_A 6-phosphogluconate dehy 92.4 0.11 3.8E-06 51.3 4.8 36 19-54 12-47 (480)
364 3o0h_A Glutathione reductase; 92.4 0.29 1E-05 48.2 7.9 42 21-63 25-66 (484)
365 3qfa_A Thioredoxin reductase 1 92.3 0.13 4.4E-06 51.3 5.3 31 24-54 212-242 (519)
366 2o3j_A UDP-glucose 6-dehydroge 92.3 0.12 4E-06 51.2 4.8 32 23-54 10-43 (481)
367 2q3e_A UDP-glucose 6-dehydroge 92.2 0.11 3.7E-06 51.2 4.5 33 23-55 6-40 (467)
368 1m6i_A Programmed cell death p 92.2 0.36 1.2E-05 47.7 8.4 39 20-58 9-49 (493)
369 2h78_A Hibadh, 3-hydroxyisobut 92.2 0.13 4.3E-06 47.4 4.7 33 23-55 4-36 (302)
370 3pdu_A 3-hydroxyisobutyrate de 92.2 0.095 3.2E-06 47.9 3.9 33 24-56 3-35 (287)
371 3l6d_A Putative oxidoreductase 92.2 0.15 5E-06 47.1 5.2 33 23-55 10-42 (306)
372 3oj0_A Glutr, glutamyl-tRNA re 92.2 0.074 2.5E-06 43.1 2.7 33 23-55 22-54 (144)
373 3ojo_A CAP5O; rossmann fold, c 92.2 0.12 4.1E-06 50.2 4.6 34 23-56 12-45 (431)
374 2hjr_A Malate dehydrogenase; m 92.1 0.15 5.2E-06 47.6 5.1 33 23-55 15-48 (328)
375 1jay_A Coenzyme F420H2:NADP+ o 92.1 0.14 4.9E-06 44.2 4.7 32 24-55 2-34 (212)
376 1cjc_A Protein (adrenodoxin re 92.1 0.12 4.3E-06 50.6 4.7 35 23-57 146-201 (460)
377 3eag_A UDP-N-acetylmuramate:L- 92.0 0.16 5.4E-06 47.4 5.2 34 23-56 5-39 (326)
378 1dlj_A UDP-glucose dehydrogena 92.0 0.12 4.1E-06 49.8 4.5 31 24-55 2-32 (402)
379 4gwg_A 6-phosphogluconate dehy 92.0 0.15 5.1E-06 50.3 5.1 35 21-55 3-37 (484)
380 2v6b_A L-LDH, L-lactate dehydr 92.0 0.15 5E-06 47.2 4.8 32 24-55 2-35 (304)
381 1txg_A Glycerol-3-phosphate de 92.0 0.11 3.8E-06 48.4 4.1 30 24-53 2-31 (335)
382 3l9w_A Glutathione-regulated p 92.0 0.13 4.6E-06 49.6 4.7 34 23-56 5-38 (413)
383 3fbs_A Oxidoreductase; structu 92.0 0.14 4.8E-06 46.3 4.7 33 23-56 142-174 (297)
384 2wtb_A MFP2, fatty acid multif 91.9 0.19 6.4E-06 52.3 6.1 33 23-55 313-345 (725)
385 1x0v_A GPD-C, GPDH-C, glycerol 91.9 0.088 3E-06 49.6 3.4 35 22-56 8-49 (354)
386 2ywl_A Thioredoxin reductase r 91.8 0.41 1.4E-05 39.9 7.2 50 279-333 56-105 (180)
387 3i3l_A Alkylhalidase CMLS; fla 91.8 0.22 7.7E-06 50.5 6.4 52 279-332 128-182 (591)
388 2aqj_A Tryptophan halogenase, 91.7 0.34 1.2E-05 48.4 7.6 38 20-57 3-43 (538)
389 2qyt_A 2-dehydropantoate 2-red 91.7 0.11 3.8E-06 47.9 3.7 31 23-53 9-45 (317)
390 4dna_A Probable glutathione re 91.7 0.32 1.1E-05 47.5 7.3 41 21-62 4-44 (463)
391 2qcu_A Aerobic glycerol-3-phos 91.6 0.34 1.2E-05 48.0 7.5 40 20-59 1-40 (501)
392 3ego_A Probable 2-dehydropanto 91.6 0.16 5.5E-06 46.9 4.7 32 23-55 3-34 (307)
393 3cky_A 2-hydroxymethyl glutara 91.6 0.16 5.6E-06 46.4 4.8 33 23-55 5-37 (301)
394 3dgh_A TRXR-1, thioredoxin red 91.6 0.19 6.4E-06 49.6 5.4 33 23-55 188-220 (483)
395 3e1t_A Halogenase; flavoprotei 91.6 0.35 1.2E-05 48.0 7.4 52 279-332 111-166 (512)
396 2pzm_A Putative nucleotide sug 91.4 0.22 7.6E-06 46.2 5.5 48 8-55 6-54 (330)
397 3gvi_A Malate dehydrogenase; N 91.4 0.2 6.9E-06 46.7 5.1 36 20-55 5-41 (324)
398 2pyx_A Tryptophan halogenase; 91.4 0.47 1.6E-05 47.2 8.2 36 21-56 6-53 (526)
399 3ktd_A Prephenate dehydrogenas 91.4 0.19 6.7E-06 47.1 5.0 33 23-55 9-41 (341)
400 2rcy_A Pyrroline carboxylate r 91.4 0.16 5.3E-06 45.6 4.2 35 22-56 4-42 (262)
401 3k31_A Enoyl-(acyl-carrier-pro 91.3 0.29 9.9E-06 44.8 6.1 36 20-55 28-66 (296)
402 2wdq_A Succinate dehydrogenase 91.3 0.4 1.4E-05 48.5 7.6 41 21-61 6-46 (588)
403 1guz_A Malate dehydrogenase; o 91.2 0.2 6.8E-06 46.4 4.9 32 24-55 2-35 (310)
404 4ezb_A Uncharacterized conserv 91.2 0.17 5.9E-06 47.0 4.5 33 23-55 25-58 (317)
405 3c4n_A Uncharacterized protein 91.2 0.11 3.7E-06 50.0 3.1 58 271-332 161-230 (405)
406 4b1b_A TRXR, thioredoxin reduc 91.2 0.21 7.1E-06 50.1 5.3 36 23-58 224-259 (542)
407 1x13_A NAD(P) transhydrogenase 91.1 0.19 6.5E-06 48.4 4.8 33 23-55 173-205 (401)
408 2iz1_A 6-phosphogluconate dehy 91.0 0.21 7.1E-06 49.2 5.1 35 20-54 3-37 (474)
409 3c7a_A Octopine dehydrogenase; 90.9 0.18 6.2E-06 48.5 4.4 30 23-52 3-33 (404)
410 1nyt_A Shikimate 5-dehydrogena 90.9 0.28 9.5E-06 44.4 5.4 32 23-54 120-151 (271)
411 2a9f_A Putative malic enzyme ( 90.9 0.21 7.1E-06 47.6 4.6 36 20-55 186-222 (398)
412 2bs2_A Quinol-fumarate reducta 90.9 0.52 1.8E-05 48.4 8.1 41 21-61 4-44 (660)
413 3p7m_A Malate dehydrogenase; p 90.9 0.26 8.8E-06 45.9 5.3 36 20-55 3-39 (321)
414 4ffl_A PYLC; amino acid, biosy 90.9 0.22 7.6E-06 47.0 5.0 33 24-56 3-35 (363)
415 1o94_A Tmadh, trimethylamine d 90.8 0.18 6.1E-06 52.6 4.6 36 23-59 529-566 (729)
416 2f1k_A Prephenate dehydrogenas 90.8 0.23 7.9E-06 44.9 4.8 32 24-55 2-33 (279)
417 2gqf_A Hypothetical protein HI 90.8 0.54 1.8E-05 45.1 7.6 60 271-332 101-162 (401)
418 1k0i_A P-hydroxybenzoate hydro 90.7 0.27 9.2E-06 46.8 5.5 53 279-333 103-159 (394)
419 2zxi_A TRNA uridine 5-carboxym 90.7 0.5 1.7E-05 48.1 7.6 51 279-332 123-174 (637)
420 2gag_A Heterotetrameric sarcos 90.7 0.12 4.2E-06 55.6 3.3 37 23-59 285-321 (965)
421 1l7d_A Nicotinamide nucleotide 90.7 0.22 7.7E-06 47.5 4.9 33 23-55 173-205 (384)
422 2aef_A Calcium-gated potassium 90.6 0.12 4.2E-06 45.5 2.7 32 23-55 10-41 (234)
423 2h88_A Succinate dehydrogenase 90.6 0.44 1.5E-05 48.6 7.1 41 21-61 17-57 (621)
424 1yqg_A Pyrroline-5-carboxylate 90.6 0.21 7.1E-06 44.7 4.3 32 24-55 2-34 (263)
425 2qa1_A PGAE, polyketide oxygen 90.5 0.49 1.7E-05 46.9 7.2 52 279-333 106-161 (500)
426 3tri_A Pyrroline-5-carboxylate 90.4 0.26 9E-06 44.8 4.9 34 22-55 3-39 (280)
427 2eez_A Alanine dehydrogenase; 90.4 0.24 8.1E-06 47.1 4.7 33 23-55 167-199 (369)
428 1pjc_A Protein (L-alanine dehy 90.4 0.24 8.2E-06 46.9 4.7 33 23-55 168-200 (361)
429 3zwc_A Peroxisomal bifunctiona 90.4 0.33 1.1E-05 50.4 6.1 35 22-56 316-350 (742)
430 1vl6_A Malate oxidoreductase; 90.3 0.25 8.5E-06 46.9 4.6 34 21-54 191-225 (388)
431 1gte_A Dihydropyrimidine dehyd 90.3 0.22 7.4E-06 54.1 4.8 33 24-56 334-367 (1025)
432 1ur5_A Malate dehydrogenase; o 90.3 0.29 9.8E-06 45.3 5.0 33 23-55 3-36 (309)
433 2gf2_A Hibadh, 3-hydroxyisobut 90.2 0.26 8.7E-06 45.0 4.6 32 24-55 2-33 (296)
434 1a5z_A L-lactate dehydrogenase 90.1 0.23 7.8E-06 46.2 4.2 32 24-55 2-35 (319)
435 4id9_A Short-chain dehydrogena 90.1 0.27 9.2E-06 45.8 4.8 36 22-57 19-55 (347)
436 2qrj_A Saccharopine dehydrogen 90.1 0.29 9.8E-06 46.7 4.9 40 22-61 214-258 (394)
437 1w6u_A 2,4-dienoyl-COA reducta 90.1 0.53 1.8E-05 42.9 6.7 46 10-55 14-60 (302)
438 3c24_A Putative oxidoreductase 90.0 0.28 9.5E-06 44.7 4.7 33 23-55 12-45 (286)
439 1hdo_A Biliverdin IX beta redu 90.0 0.35 1.2E-05 41.0 5.0 33 23-55 4-37 (206)
440 2qa2_A CABE, polyketide oxygen 90.0 0.54 1.9E-05 46.5 7.1 52 279-333 107-162 (499)
441 1vpd_A Tartronate semialdehyde 90.0 0.27 9.3E-06 44.9 4.6 33 23-55 6-38 (299)
442 3pqe_A L-LDH, L-lactate dehydr 89.9 0.29 9.9E-06 45.6 4.7 33 22-54 5-39 (326)
443 1y6j_A L-lactate dehydrogenase 89.9 0.31 1E-05 45.3 4.9 34 22-55 7-42 (318)
444 2p4q_A 6-phosphogluconate dehy 89.9 0.28 9.7E-06 48.6 4.9 33 23-55 11-43 (497)
445 1hyh_A L-hicdh, L-2-hydroxyiso 89.8 0.25 8.6E-06 45.6 4.3 32 24-55 3-36 (309)
446 2g5c_A Prephenate dehydrogenas 89.8 0.31 1.1E-05 44.1 4.8 32 24-55 3-36 (281)
447 3k30_A Histamine dehydrogenase 89.8 0.25 8.5E-06 51.1 4.6 39 23-61 524-564 (690)
448 2pgd_A 6-phosphogluconate dehy 89.8 0.3 1E-05 48.2 5.0 33 23-55 3-35 (482)
449 3ew7_A LMO0794 protein; Q8Y8U8 89.7 0.34 1.2E-05 41.7 4.8 32 24-55 2-34 (221)
450 1jw9_B Molybdopterin biosynthe 89.7 0.27 9.1E-06 44.0 4.2 34 22-55 31-65 (249)
451 2ahr_A Putative pyrroline carb 89.7 0.32 1.1E-05 43.5 4.7 33 23-55 4-36 (259)
452 3ius_A Uncharacterized conserv 89.7 0.29 1E-05 44.1 4.6 33 23-55 6-38 (286)
453 1yj8_A Glycerol-3-phosphate de 89.7 0.22 7.5E-06 47.4 3.8 33 24-56 23-62 (375)
454 1wdk_A Fatty oxidation complex 89.6 0.26 8.7E-06 51.2 4.5 33 23-55 315-347 (715)
455 1edz_A 5,10-methylenetetrahydr 89.6 0.31 1.1E-05 45.2 4.6 42 22-63 177-227 (320)
456 1pgj_A 6PGDH, 6-PGDH, 6-phosph 89.5 0.3 1E-05 48.1 4.8 32 24-55 3-34 (478)
457 1w4x_A Phenylacetone monooxyge 89.5 0.32 1.1E-05 48.7 5.0 34 23-56 187-220 (542)
458 1p77_A Shikimate 5-dehydrogena 89.5 0.24 8.1E-06 44.9 3.7 33 23-55 120-152 (272)
459 1pjq_A CYSG, siroheme synthase 89.5 0.29 1E-05 47.9 4.6 34 21-54 11-44 (457)
460 1rp0_A ARA6, thiazole biosynth 89.4 0.66 2.3E-05 42.0 6.7 52 279-332 119-185 (284)
461 3ces_A MNMG, tRNA uridine 5-ca 89.4 0.6 2.1E-05 47.6 6.9 51 279-332 124-175 (651)
462 3h2s_A Putative NADH-flavin re 89.4 0.36 1.2E-05 41.7 4.7 31 24-54 2-33 (224)
463 3phh_A Shikimate dehydrogenase 89.3 0.39 1.3E-05 43.4 4.9 33 23-55 119-151 (269)
464 2vhw_A Alanine dehydrogenase; 89.3 0.33 1.1E-05 46.2 4.7 33 23-55 169-201 (377)
465 3orf_A Dihydropteridine reduct 89.2 0.4 1.4E-05 42.6 5.0 33 24-56 24-57 (251)
466 2cvz_A Dehydrogenase, 3-hydrox 89.2 0.32 1.1E-05 44.1 4.4 31 24-55 3-33 (289)
467 3dhn_A NAD-dependent epimerase 89.1 0.32 1.1E-05 42.2 4.2 33 23-55 5-38 (227)
468 3b1f_A Putative prephenate deh 89.0 0.31 1.1E-05 44.3 4.2 34 22-55 6-41 (290)
469 1lqt_A FPRA; NADP+ derivative, 88.9 0.34 1.2E-05 47.4 4.7 38 23-60 148-206 (456)
470 4gbj_A 6-phosphogluconate dehy 88.8 0.31 1.1E-05 44.7 4.0 33 24-56 7-39 (297)
471 1np3_A Ketol-acid reductoisome 88.7 0.39 1.3E-05 45.0 4.7 33 23-55 17-49 (338)
472 3d1l_A Putative NADP oxidoredu 88.7 0.34 1.2E-05 43.4 4.2 33 23-55 11-44 (266)
473 1yb4_A Tartronic semialdehyde 88.6 0.31 1.1E-05 44.4 3.9 32 23-55 4-35 (295)
474 4a9w_A Monooxygenase; baeyer-v 88.6 0.9 3.1E-05 42.0 7.2 51 279-332 76-126 (357)
475 2egg_A AROE, shikimate 5-dehyd 88.6 0.52 1.8E-05 43.3 5.4 32 23-54 142-174 (297)
476 1ff9_A Saccharopine reductase; 88.4 0.4 1.4E-05 46.8 4.8 32 23-54 4-35 (450)
477 4b4o_A Epimerase family protei 88.4 0.52 1.8E-05 42.8 5.3 34 24-57 2-36 (298)
478 1n4w_A CHOD, cholesterol oxida 88.3 0.53 1.8E-05 46.6 5.7 54 278-332 220-282 (504)
479 4dmm_A 3-oxoacyl-[acyl-carrier 88.3 0.38 1.3E-05 43.3 4.2 32 24-55 30-62 (269)
480 2c5a_A GDP-mannose-3', 5'-epim 88.2 0.72 2.5E-05 43.6 6.4 35 22-56 29-64 (379)
481 3d0o_A L-LDH 1, L-lactate dehy 88.2 0.42 1.4E-05 44.4 4.5 34 21-54 5-40 (317)
482 3ihg_A RDME; flavoenzyme, anth 88.2 0.64 2.2E-05 46.3 6.2 51 279-332 120-177 (535)
483 2hk9_A Shikimate dehydrogenase 88.2 0.39 1.3E-05 43.5 4.2 32 23-54 130-161 (275)
484 3gt0_A Pyrroline-5-carboxylate 88.2 0.46 1.6E-05 42.2 4.6 33 23-55 3-39 (247)
485 3ond_A Adenosylhomocysteinase; 88.2 0.44 1.5E-05 46.8 4.8 34 22-55 265-298 (488)
486 2rir_A Dipicolinate synthase, 88.1 0.47 1.6E-05 43.5 4.8 34 22-55 157-190 (300)
487 1kf6_A Fumarate reductase flav 88.0 0.8 2.7E-05 46.5 6.9 52 279-332 134-191 (602)
488 1i36_A Conserved hypothetical 88.0 0.41 1.4E-05 42.8 4.2 30 24-53 2-31 (264)
489 3ek2_A Enoyl-(acyl-carrier-pro 88.0 0.5 1.7E-05 42.2 4.8 35 21-55 13-50 (271)
490 1nvt_A Shikimate 5'-dehydrogen 87.9 0.43 1.5E-05 43.5 4.3 31 23-54 129-159 (287)
491 3rp8_A Flavoprotein monooxygen 87.6 0.78 2.7E-05 43.8 6.2 49 279-332 127-175 (407)
492 1oju_A MDH, malate dehydrogena 87.5 0.46 1.6E-05 43.6 4.2 32 24-55 2-35 (294)
493 2d5c_A AROE, shikimate 5-dehyd 87.5 0.54 1.8E-05 42.2 4.7 32 24-55 118-149 (263)
494 3d4o_A Dipicolinate synthase s 87.5 0.54 1.8E-05 43.0 4.8 34 22-55 155-188 (293)
495 3i6i_A Putative leucoanthocyan 87.5 0.52 1.8E-05 43.9 4.8 36 20-55 8-44 (346)
496 3fi9_A Malate dehydrogenase; s 87.5 0.56 1.9E-05 44.0 4.9 35 21-55 7-44 (343)
497 3qvo_A NMRA family protein; st 87.3 0.48 1.7E-05 41.5 4.2 34 22-55 23-58 (236)
498 4aj2_A L-lactate dehydrogenase 87.2 0.68 2.3E-05 43.2 5.3 34 21-54 18-53 (331)
499 2i6t_A Ubiquitin-conjugating e 87.1 0.5 1.7E-05 43.5 4.3 34 23-56 15-50 (303)
500 3q2o_A Phosphoribosylaminoimid 87.1 0.82 2.8E-05 43.5 6.0 33 23-55 15-47 (389)
No 1
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3.5e-46 Score=370.32 Aligned_cols=341 Identities=24% Similarity=0.461 Sum_probs=271.9
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccccchhhhhhhhccCCCCCCCCCCCcccccccccccc
Q 015413 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYAS 98 (407)
Q Consensus 19 ~~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (407)
++++|||||||||++|+++|+.|+++|++|+|||+++++||++.+++..++..+.. .+.+. .
T Consensus 17 ~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s~~~~~l~~~~~-~g~~~-----------------~ 78 (475)
T 3p1w_A 17 QGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETASLNLTNLYNTFK-PKENI-----------------P 78 (475)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHC-TTSCC-----------------C
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccccchhhhhhhcc-cCCCc-----------------c
Confidence 35679999999999999999999999999999999999999999999876544443 22211 0
Q ss_pred ccccCCCCceEEecCCCeEEeeCcHHHHHHHhcCcccccccccccceeeEc--------cCCceeecCCCHHHHhhhccC
Q 015413 99 RLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLD--------ADAKLCSVPDSRAAIFKDKSL 170 (407)
Q Consensus 99 ~~~~~~~~~~~idl~Gp~~~~~~~~~~~~l~~~g~~~~~~f~~~~~~~~~~--------~~g~~~~~p~~~~~~~~~~~l 170 (407)
..+ ...|.|++|+. |+++++.+.++++|.++|+.+|++|+.++..|++. ++|+++++|+++.++|+++.+
T Consensus 79 ~~~-g~~R~y~iDL~-P~~l~~~g~L~~lL~~~gv~~ylef~~~~~~y~~~~~~~~~~~~~g~~~~VPss~~e~~~~~lL 156 (475)
T 3p1w_A 79 SKY-GENRHWNVDLI-PKFILVGGNLVKILKKTRVTNYLEWLVVEGSYVYQHQKKGFLTSEKFIHKVPATDMEALVSPLL 156 (475)
T ss_dssp GGG-CCGGGCCEESS-CCBEETTSHHHHHHHHTTCGGGSCEEECSEEEEEEEECCCSSSCCEEEEECCCSHHHHHTCTTS
T ss_pred ccc-ccccceEEeec-CeEeecCcHHHHHHHHCCchheeEEEecCcceEEecCccccccCCCceEeCCCCHHHHhhccCC
Confidence 122 35689999995 99999999999999999999999999999988764 256799999999999999999
Q ss_pred ChHHHHHHHHHHHHHHhhcCCCccccccccccccccCCcHHHHHHhcCCChhhHHHHHHHHHhccCCcchhhhhhchhhH
Q 015413 171 GLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDG 250 (407)
Q Consensus 171 ~~~~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 250 (407)
++.+|+++++|+..+.++....+.... ..+..+.|+.+|++++++++.+++++.+++++... .+. ...++..+
T Consensus 157 s~~eK~~l~kFL~~l~~~~~~~~~~~~----~~~l~~~s~~e~l~~~gls~~l~~fl~~alaL~~~-~~~--~~~~a~~~ 229 (475)
T 3p1w_A 157 SLMEKNRCKNFYQYVSEWDANKRNTWD----NLDPYKLTMLEIYKHFNLCQLTIDFLGHAVALYLN-DDY--LKQPAYLT 229 (475)
T ss_dssp CHHHHHHHHHHHHHHHHCCTTCGGGST----TCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSS-SGG--GGSBHHHH
T ss_pred CHHHHHHHHHHHHHHHhhhhccchhhh----cccccCCCHHHHHHHcCCCHHHHHHHHHHHHhhcC-CCc--ccCCHHHH
Confidence 999999999999988776432211000 11234689999999999999999988777666432 121 12467778
Q ss_pred HHHHHHHHHhhccccCCCcceEeecCCcchHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEE
Q 015413 251 INRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKL 330 (407)
Q Consensus 251 l~~~~~~~~s~~~~~~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~V 330 (407)
+.++..|+.|+++|+. +++.||+||+++|+++|++.+++.|++|+++++|++|..+ +++++++|++.+|++++||+|
T Consensus 230 l~ri~~y~~Sl~~yg~--s~~~yp~gG~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d-~~g~v~gV~~~~G~~i~Ad~V 306 (475)
T 3p1w_A 230 LERIKLYMQSISAFGK--SPFIYPLYGLGGIPEGFSRMCAINGGTFMLNKNVVDFVFD-DDNKVCGIKSSDGEIAYCDKV 306 (475)
T ss_dssp HHHHHHHHHHHHHHSS--CSEEEETTCTTHHHHHHHHHHHHC--CEESSCCEEEEEEC-TTSCEEEEEETTSCEEEEEEE
T ss_pred HHHHHHHHHHHhhcCC--CceEEECCCHHHHHHHHHHHHHHcCCEEEeCCeEEEEEEe-cCCeEEEEEECCCcEEECCEE
Confidence 8888999988888874 3589999999999999999999999999999999999984 278889999989999999999
Q ss_pred EECCCCCCCCCCccchhhhhhhhhhhcccCCCceEEEEEEEeCCCCCC--CCCcEEEEeCCCC---CCceEEEEeeccC
Q 015413 331 VLDPSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKP--DLSNFLVIFPPRC---KIDSWYFCLCYAE 404 (407)
Q Consensus 331 I~~p~~~~~~~~~~~~p~lp~~~~~~~~~~~~g~~~k~i~i~~~p~~~--~~~~~~~~~p~~~---~~~~~~~~~~~~~ 404 (407)
|+++++.. ++|... ...+.++|++||.++|+.. +.++++|+||+.+ .++.|..+++++|
T Consensus 307 I~a~~~~~---------~~p~~~------~~~~~v~R~i~I~~~pi~~~~~~~~~~i~~P~~~~~~~~~iy~~~~s~~~ 370 (475)
T 3p1w_A 307 ICDPSYVM---------HLKNKI------KKIGQVIRCICILSNPIPETNQTNSCQIIIPQNQLNRKSDIYINLVSFQH 370 (475)
T ss_dssp EECGGGCT---------TSTTSE------EEEEEEEEEEEEESSCCTTSTTCSSEEEEECGGGGTSSSCEEEEEEEGGG
T ss_pred EECCCccc---------cCcccc------cccceEEEEEEEEeccCcccCCCceEEEEeCCcccCCCCCEEEEEECCCc
Confidence 99887651 122110 1257899999999999975 4567899999965 4578877777665
No 2
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=100.00 E-value=1e-44 Score=369.30 Aligned_cols=351 Identities=32% Similarity=0.536 Sum_probs=270.0
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccccchhhhhhhhccCCCCCCC------------------
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSV------------------ 82 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~------------------ 82 (407)
.+|||+|||+||.|.+.|+.|++.|++|+|+|+|++|||.+.++.+.++..|+...+.....
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~~~~l~~l~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLKEYQENNDVVTENSMWQEQILENEEAI 86 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHHHTC----------CGGGGCCTTEEEE
T ss_pred CcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCccccccHHHHHHHHHHhhccccccccccchhhhhhcchhhc
Confidence 36999999999999999999999999999999999999999999999988887655421000
Q ss_pred ---CCCCcccccccccc---------------------------------------------------------------
Q 015413 83 ---CPDPLYSDVEISNY--------------------------------------------------------------- 96 (407)
Q Consensus 83 ---~~~~~~~~~~~~~~--------------------------------------------------------------- 96 (407)
.....+++.++.++
T Consensus 87 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (650)
T 1vg0_A 87 PLSSKDKTIQHVEVFCYASQDLHKDVEEAGALQKNHASVTSAQSAEAAEAAETSCLPTAVEPLSMGSCEIPAEQSQCPGP 166 (650)
T ss_dssp EBCSSCCCEEEEEEEECSCC------------------------------------------------------------
T ss_pred cccccccccccceeEeecccccccchhhcccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 00000000000000
Q ss_pred ---------------------------------------cc--c-----cccCCCCceEEecCCCeEEeeCcHHHHHHHh
Q 015413 97 ---------------------------------------AS--R-----LLSQHPRNFNLDVSGPRVLFCADHAVDLMLK 130 (407)
Q Consensus 97 ---------------------------------------~~--~-----~~~~~~~~~~idl~Gp~~~~~~~~~~~~l~~ 130 (407)
.. . .+.+..|+|+||+ ||+++++++.++++|.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~i~~~~R~f~~DL-~PklL~~~g~lv~LL~~ 245 (650)
T 1vg0_A 167 ESSPEVNDAEATGKKENSDAKSSTEEPSENVPKVQDNTETPKKNRITYSQIIKEGRRFNIDL-VSKLLYSRGLLIDLLIK 245 (650)
T ss_dssp --------------------------------------------CCCHHHHHHTGGGCCEES-SCCCEESSSHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccchhhhcccCCCeEEee-CCeeeeCCcHHHHHHHH
Confidence 00 0 0113579999999 59999999999999999
Q ss_pred cCcccccccccccceeeEccCCceeecCCCHHHHhhhccCChHHHHHHHHHHHHHHhhcCCCccccccccccccccCCcH
Q 015413 131 SGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPF 210 (407)
Q Consensus 131 ~g~~~~~~f~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~l~~~~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 210 (407)
+|+.+|++|+.++..|++. +|+++++|+++.++|+++.+++.+|+++++|+..+.++.. .+ .....+..+|+
T Consensus 246 sgV~~yLEFk~v~~~y~~~-~G~~~~VPas~~eif~s~~Lsl~EKr~L~kFl~~~~~~~~-~p------~~~~~~d~~S~ 317 (650)
T 1vg0_A 246 SNVSRYAEFKNITRILAFR-EGTVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCVEYEE-HP------DEYRAYEGTTF 317 (650)
T ss_dssp HTGGGGCCEEECCEEEEES-SSSEEECCCSHHHHHHCSSSCHHHHHHHHHHHHHHHTGGG-CH------HHHHTTTTSBH
T ss_pred cCCcceeeEEEccceEEec-CCCEeECCCCHHHHHhCcCCCHHHHHHHHHHHHHHHHhcc-Ch------HHHhhhccCCH
Confidence 9999999999999988875 8889999999999999999999999999999998877532 11 11234567999
Q ss_pred HHHHHhcCCChhhHHHHHHHHHhccCCcchhhhhhchhhHHHHHHHHHHhhccccCCCcceEeecCCcchHHHHHHHHHH
Q 015413 211 AEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAA 290 (407)
Q Consensus 211 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~s~~~~~~~~~~~~~p~gG~~~l~~al~r~~~ 290 (407)
.+||+++++++.+++++.+.+++.+... .++..++.++..|+.++++|+. ++++||+||+++|+++|+|+++
T Consensus 318 ~d~L~~~~ls~~L~~~L~~~lal~~~~~------~pa~~~l~~i~~~l~sl~~yg~--sg~~yp~GG~g~L~qaL~r~~~ 389 (650)
T 1vg0_A 318 SEYLKTQKLTPNLQYFVLHSIAMTSETT------SCTVDGLKATKKFLQCLGRYGN--TPFLFPLYGQGELPQCFCRMCA 389 (650)
T ss_dssp HHHHTTSSSCHHHHHHHHHHTTC--CCS------CBHHHHHHHHHHHHHHTTSSSS--SSEEEETTCTTHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHhccCCCC------CchhHHHHHHHHHHHHHHhhcc--CceEEeCCchhHHHHHHHHHHH
Confidence 9999999999999998887665543221 2345556667788888888875 3589999999999999999999
Q ss_pred hcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECCCCCCCCCCccchhhhhhhhhhhcccCCCceEEEEEE
Q 015413 291 VKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGIC 370 (407)
Q Consensus 291 ~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~p~~~~~~~~~~~~p~lp~~~~~~~~~~~~g~~~k~i~ 370 (407)
+.||+|+||++|++|.++.++|++++|++.+|++++||+||++|.++..... ++..++.++|++|
T Consensus 390 ~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~~lp~~~~---------------~~~~~~~v~R~i~ 454 (650)
T 1vg0_A 390 VFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYLSENTC---------------SRVQYRQISRAVL 454 (650)
T ss_dssp HTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGGGBCTTTT---------------TTCCCEEEEEEEE
T ss_pred HcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChhhcCHhHh---------------ccccccceEEEEE
Confidence 9999999999999999972118899998888999999999998876522210 1224688999999
Q ss_pred EeCCCCCCCC---CcEEEEeCCCC--CCceEEEEeecc
Q 015413 371 ITRSSLKPDL---SNFLVIFPPRC--KIDSWYFCLCYA 403 (407)
Q Consensus 371 i~~~p~~~~~---~~~~~~~p~~~--~~~~~~~~~~~~ 403 (407)
|+++|+.+.. ..++++||+.+ ..+.+..+.+.+
T Consensus 455 i~~~pi~~~~~~~~~~~iiiP~~~g~~~~V~i~~~Ss~ 492 (650)
T 1vg0_A 455 ITDGSVLRTDADQQVSILTVPAEEPGSFAVRVIELCSS 492 (650)
T ss_dssp EESSCSSCCSCCCCCEEEEECCSSTTSCCEEEEEECGG
T ss_pred EecCCCCCcCCCcceEEEEccCccCCCCCEEEEEeCCC
Confidence 9999997543 44888999875 345555555443
No 3
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=100.00 E-value=1.6e-35 Score=295.83 Aligned_cols=324 Identities=26% Similarity=0.516 Sum_probs=238.3
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccccchhhhhhhhccCCCCCCCCCCCccccccccccccc
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (407)
+.++||||||||++||+||++|+++|++|+||||++++||+++|++.+|...+. +.+... ..+. ..
T Consensus 9 ~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~g~~~~~-d~~~~~---------~~~~----~~ 74 (453)
T 2bcg_G 9 DTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKF-KQNPIS---------KEER----ES 74 (453)
T ss_dssp CCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHH-CSSCCC---------HHHH----HH
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccceeccchhcee-ccCCcc---------ccCc----ch
Confidence 356999999999999999999999999999999999999999999987621211 111000 0000 00
Q ss_pred cccCCCCceEEecCCCeEEeeCcHHHHHHHhcCcccccccccccceeeEccCCceeecCCCHHHHhhhccCChHHHHHHH
Q 015413 100 LLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLM 179 (407)
Q Consensus 100 ~~~~~~~~~~idl~Gp~~~~~~~~~~~~l~~~g~~~~~~f~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~l~~~~k~~l~ 179 (407)
.+ .....|.+|+ +|++++..+.+.++|.++|+.+|++|...+..|.+. +|+.+++|.+..+.+....++..+++.++
T Consensus 75 ~~-~~g~~~~~~l-~P~~l~~~~~l~~ll~~lg~~~~l~~~~~~~~~~~~-~g~~~~~p~~~~~~~~~~l~~~~~~~~~~ 151 (453)
T 2bcg_G 75 KF-GKDRDWNVDL-IPKFLMANGELTNILIHTDVTRYVDFKQVSGSYVFK-QGKIYKVPANEIEAISSPLMGIFEKRRMK 151 (453)
T ss_dssp HH-CCGGGCCEES-SCCBEETTSHHHHHHHHHTGGGTCCEEECCCEEEEE-TTEEEECCSSHHHHHHCTTSCHHHHHHHH
T ss_pred hc-ccccceeecc-ccceeecCcHHHHHHHhcCCccceEEEEccceeEEe-CCeEEECCCChHHHHhhhccchhhHHHHH
Confidence 01 1235677899 499999999999999999999999999988878765 88999999986677877777888999999
Q ss_pred HHHHHHHhhcCCCccccccccccccccCCcHHHHHHhcCCChhhHHHHHHHHHhcc---CCcchhhhhhchhhHHHHHHH
Q 015413 180 RFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMAD---YDQEVSEYVLKTRDGINRLAL 256 (407)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~s~~~~l~~~~~ 256 (407)
+|++.+.++....+.. . . ..+....|+.+|+++++.++.+++++.+.+.+.. +... ++...+.++..
T Consensus 152 ~~~~~~~~~~~~~p~~--~-~-~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~l~~~~~~~~~------p~~~~~~~~~~ 221 (453)
T 2bcg_G 152 KFLEWISSYKEDDLST--H-Q-GLDLDKNTMDEVYYKFGLGNSTKEFIGHAMALWTNDDYLQQ------PARPSFERILL 221 (453)
T ss_dssp HHHHHHHHCBTTBGGG--S-T-TCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSSGGGGS------BHHHHHHHHHH
T ss_pred HHHHHHHHhccCCchh--h-h-ccccccCCHHHHHHHhCCCHHHHHHHHHHHHhccCccccCC------chHHHHHHHHH
Confidence 9998877654321110 0 0 0124578999999999999999998766544321 1111 23344555566
Q ss_pred HHHhhccccCCCcceEeecCCcchHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECCCC
Q 015413 257 YNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSF 336 (407)
Q Consensus 257 ~~~s~~~~~~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~p~~ 336 (407)
|..+++.++. +++.||+||+++|+++|++.+++.|++|+++++|++|..+.+++++++|++ +|++++||+||+++..
T Consensus 222 ~~~s~~~~~~--~~~~~p~gG~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~ 298 (453)
T 2bcg_G 222 YCQSVARYGK--SPYLYPMYGLGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTY 298 (453)
T ss_dssp HHHHHHHHSS--CSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGG
T ss_pred HHHHHHhhcC--CceEeeCCCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCc
Confidence 7777666653 347799999999999999999999999999999999987511467778886 6888999999976543
Q ss_pred CCCCCCccchhhhhhhhhhhcccCCCc-eEEEEEEEeCCCCCC--CCCcEEEEeCCCC
Q 015413 337 TVPGSLASSHQQLQESFQAFSLSDNKG-KVARGICITRSSLKP--DLSNFLVIFPPRC 391 (407)
Q Consensus 337 ~~~~~~~~~~p~lp~~~~~~~~~~~~g-~~~k~i~i~~~p~~~--~~~~~~~~~p~~~ 391 (407)
...+ + ..++ ...++++++++|+.. ...+..++||...
T Consensus 299 ~~~~---------------l---~~~~~~~~~~~~i~~~~~~~~~~~~~~~ii~~~~~ 338 (453)
T 2bcg_G 299 FPEK---------------C---KSTGQRVIRAICILNHPVPNTSNADSLQIIIPQSQ 338 (453)
T ss_dssp CGGG---------------E---EEEEEEEEEEEEEESSCCTTSTTCSSEEEEECGGG
T ss_pred cchh---------------h---cccCCcceeEEEEEccccCCCCCCccEEEEeCccc
Confidence 3111 1 1134 688999999998863 3456788888654
No 4
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=100.00 E-value=6.8e-34 Score=282.38 Aligned_cols=321 Identities=28% Similarity=0.536 Sum_probs=236.4
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccccc-hhhhhhhhccCCCCCCCCCCCcccccccccccc
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS-IADLTHFLNSHSTPSSVCPDPLYSDVEISNYAS 98 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~t~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (407)
+.++||||||||++||+||+.|+++|++|+|+|+++++||+++|++ +..... .++.+... +
T Consensus 4 ~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~~~~~~g~~-~~~~~~~~-------~---------- 65 (433)
T 1d5t_A 4 DEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYK-RFQLLEGP-------P---------- 65 (433)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEECSHHHHHH-HTTCTTCC-------C----------
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccccccHHHHHh-hccCCCCC-------h----------
Confidence 3569999999999999999999999999999999999999999998 432110 11110000 0
Q ss_pred ccccCCCCceEEecCCCeEEeeCcHHHHHHHhcCcccccccccccceeeEccCCceeecCCCHHHHhhhccCChHHHHHH
Q 015413 99 RLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQL 178 (407)
Q Consensus 99 ~~~~~~~~~~~idl~Gp~~~~~~~~~~~~l~~~g~~~~~~f~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~l~~~~k~~l 178 (407)
..+ .....|.+|+ ||++++..+.+.++|.++|+.+|++|...+..|++. +|+.+.+|.+..+.+.....+..+++.+
T Consensus 66 ~~~-~~g~~~~~d~-gP~~l~~~~~l~~ll~~lgl~~~l~~~~~~~~~~~~-~g~~~~~p~~~~~~~~~~l~~~~~~~~~ 142 (433)
T 1d5t_A 66 ETM-GRGRDWNVDL-IPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYK-GGKIYKVPSTETEALASNLMGMFEKRRF 142 (433)
T ss_dssp GGG-CCGGGCCEES-SCCBEETTSHHHHHHHHHTGGGGCCEEECCEEEEEE-TTEEEECCCSHHHHHHCSSSCHHHHHHH
T ss_pred hHh-cccCceEEcc-CcceeeccchHHHHHHHcCCccceEEEEeCceEEee-CCEEEECCCCHHHHhhCcccChhhHHHH
Confidence 001 1235688999 599998888999999999999999999988877765 8899999998767777777777789999
Q ss_pred HHHHHHHHhhcCCCccccccccccccccCCcHHHHHHhcCCChhhHHHHHHHHHhccCCcchhhhhhchhhHHHHHHHHH
Q 015413 179 MRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYN 258 (407)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~ 258 (407)
++|++.+.++....+... + ..++.++|+.+|+++++.++.+++++.+.+++.. ..++ .+.++..++..+..|.
T Consensus 143 ~~~~~~~~~~~~~~p~~~---~-~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~~-~~~~--~~~p~~~~~~~~~~~~ 215 (433)
T 1d5t_A 143 RKFLVFVANFDENDPKTF---E-GVDPQNTSMRDVYRKFDLGQDVIDFTGHALALYR-TDDY--LDQPCLETINRIKLYS 215 (433)
T ss_dssp HHHHHHHHHCCTTCGGGG---T-TCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCS-SSGG--GGSBSHHHHHHHHHHH
T ss_pred HHHHHHHHhhcccCchhc---c-ccccccCCHHHHHHHcCCCHHHHHHHHHHHHhcc-CCCc--cCCCHHHHHHHHHHHH
Confidence 999988776543222110 1 1134678999999999999999998765533321 1121 1234555566666777
Q ss_pred HhhccccCCCcceEeecCCcchHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECCCCCC
Q 015413 259 SSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSFTV 338 (407)
Q Consensus 259 ~s~~~~~~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~p~~~~ 338 (407)
.++++++. +++++|+||+++|+++|++.+++.|++|+++++|++|..+ ++++++|+ .+|++++||+||++.....
T Consensus 216 ~s~~~~g~--~~~~~p~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~--~~~v~~v~-~~g~~~~ad~VV~a~~~~~ 290 (433)
T 1d5t_A 216 ESLARYGK--SPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIME--NGKVVGVK-SEGEVARCKQLICDPSYVP 290 (433)
T ss_dssp HSCCSSSC--CSEEEETTCTTHHHHHHHHHHHHHTCCCBCSCCCCEEEEE--TTEEEEEE-ETTEEEECSEEEECGGGCG
T ss_pred HHHHhcCC--CcEEEeCcCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEe--CCEEEEEE-ECCeEEECCEEEECCCCCc
Confidence 76666653 4588999999999999999999999999999999999987 77877787 5888999999997543321
Q ss_pred CCCCccchhhhhhhhhhhcccCCCceEEEEEEEeCCCCCCC--CCcEEEEeCCCC
Q 015413 339 PGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPD--LSNFLVIFPPRC 391 (407)
Q Consensus 339 ~~~~~~~~p~lp~~~~~~~~~~~~g~~~k~i~i~~~p~~~~--~~~~~~~~p~~~ 391 (407)
.. + .. .....+++++.++|+... ..+..|+||.+.
T Consensus 291 ~~--------~----~~------~~~~~~~~~il~~~~~~~~~~~~~~i~~~~~~ 327 (433)
T 1d5t_A 291 DR--------V----RK------AGQVIRIICILSHPIKNTNDANSCQIIIPQNQ 327 (433)
T ss_dssp GG--------E----EE------EEEEEEEEEEESSCCTTSTTCSSEEEEECGGG
T ss_pred cc--------c----cc------cCcceeEEEEEcCcccccCCCceEEEEeCccc
Confidence 11 0 01 124667888899987632 357788888654
No 5
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=100.00 E-value=6.5e-32 Score=273.04 Aligned_cols=296 Identities=14% Similarity=0.137 Sum_probs=181.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccccchhhhhhhhccCCCCCCCCCCCcccccccccccccccc
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLLS 102 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (407)
.+|||||||++||+||++|+++|++|+||||++++||+++|++.+|
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~t~~~~G---------------------------------- 47 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYEDQG---------------------------------- 47 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------CEEEETT----------------------------------
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEEEEEeCC----------------------------------
Confidence 5799999999999999999999999999999999999999986543
Q ss_pred CCCCceEEecCCCeEEeeCcHHHHHHHhcC--cccccccccccceee-EccCCceeecCCCHHHHhhh-ccCChHHHHHH
Q 015413 103 QHPRNFNLDVSGPRVLFCADHAVDLMLKSG--ASHYLEFKSIDATFM-LDADAKLCSVPDSRAAIFKD-KSLGLMEKNQL 178 (407)
Q Consensus 103 ~~~~~~~idl~Gp~~~~~~~~~~~~l~~~g--~~~~~~f~~~~~~~~-~~~~g~~~~~p~~~~~~~~~-~~l~~~~k~~l 178 (407)
|.+|. |++++...+.+.+++...| +.+++++.+.+..|. ...+|+.+.++.+...+... ..+++.+...+
T Consensus 48 -----~~~D~-G~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~ 121 (501)
T 4dgk_A 48 -----FTFDA-GPTVITDPSAIEELFALAGKQLKEYVELLPVTPFYRLCWESGKVFNYDNDQTRLEAQIQQFNPRDVEGY 121 (501)
T ss_dssp -----EEEEC-SCCCBSCTHHHHHHHHTTTCCGGGTCCEEEESSSEEEEETTSCEEEECSCHHHHHHHHHHHCTHHHHHH
T ss_pred -----EEEec-CceeecCchhHHHHHHHhcchhhhceeeEecCcceEEEcCCCCEEEeeccHHHHHHHHhhcCccccchh
Confidence 45777 5887766666667777655 567888888777663 33478888888876443321 23456777788
Q ss_pred HHHHHHHHhhcCCCcc-----c-cccc---cccccc----cCCcHHHHHHhcCCChhhHHHHHH-HHHhccCCcchhhhh
Q 015413 179 MRFFKLVQGHLSLDES-----E-ENNV---RISEED----LDSPFAEFLTKMKLPHKIKSIVLY-AIAMADYDQEVSEYV 244 (407)
Q Consensus 179 ~~~~~~~~~~~~~~~~-----~-~~~~---~~~~~~----~~~s~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 244 (407)
.+|++.++........ + .... ...... ...++.+++.++..++.++.++.. +..... .+ ..
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~g~---~p--~~ 196 (501)
T 4dgk_A 122 RQFLDYSRAVFKEGYLKLGTVPFLSFRDMLRAAPQLAKLQAWRSVYSKVASYIEDEHLRQAFSFHSLLVGG---NP--FA 196 (501)
T ss_dssp HHHHHHHHHHTSSSCC--CCCCCCCHHHHHHSGGGTTTSHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHS---CC----
T ss_pred hhHHHHHHHhhhhhhhhccccccchhhhhhhhhhhhhhhhhcccHHHHHHHHhccHHHHhhhhhhhcccCC---Cc--ch
Confidence 8887766554321100 0 0000 000011 114677888888888888887653 221111 11 01
Q ss_pred hchhhHHHHHHHHHHhhccccCCCcceEeecCCcchHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcE
Q 015413 245 LKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQD 324 (407)
Q Consensus 245 ~s~~~~l~~~~~~~~s~~~~~~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~ 324 (407)
.++.. .+..+.. ...| .+||+||+++|+++|++.+++.|++|++|++|++|+++ ++++++|+++||++
T Consensus 197 ~~~~~---~~~~~~~--~~~G-----~~~p~GG~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~--~~~~~gV~~~~g~~ 264 (501)
T 4dgk_A 197 TSSIY---TLIHALE--REWG-----VWFPRGGTGALVQGMIKLFQDLGGEVVLNARVSHMETT--GNKIEAVHLEDGRR 264 (501)
T ss_dssp CCCTH---HHHHHHH--SCCC-----EEEETTHHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE--TTEEEEEEETTSCE
T ss_pred hhhhh---hhhhhhh--ccCC-----eEEeCCCCcchHHHHHHHHHHhCCceeeecceeEEEee--CCeEEEEEecCCcE
Confidence 12211 1222211 1222 67999999999999999999999999999999999997 88999999999999
Q ss_pred EEcCEEEE--CCCCCCCCCCccchhhhhhh-hhhhcccCCCceEEEEEEEeCCCCC
Q 015413 325 ILSHKLVL--DPSFTVPGSLASSHQQLQES-FQAFSLSDNKGKVARGICITRSSLK 377 (407)
Q Consensus 325 i~Ad~VI~--~p~~~~~~~~~~~~p~lp~~-~~~~~~~~~~g~~~k~i~i~~~p~~ 377 (407)
+.||+||+ +|..++..+. +. .+++.. ...+..........++.+.++++..
T Consensus 265 ~~ad~VV~~a~~~~~~~~Ll-~~-~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~ 318 (501)
T 4dgk_A 265 FLTQAVASNADVVHTYRDLL-SQ-HPAAVKQSNKLQTKRMSNSLFVLYFGLNHHHD 318 (501)
T ss_dssp EECSCEEECCC-----------------------------CCEEEEEEEEESSCCT
T ss_pred EEcCEEEECCCHHHHHHHhc-cc-cccchhhhhhhhccccCCceeEEEecccCCcc
Confidence 99999995 4666655543 21 223333 2333333334567777788887764
No 6
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.96 E-value=1.1e-28 Score=250.62 Aligned_cols=299 Identities=14% Similarity=0.063 Sum_probs=197.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccccchhhhhhhhccCCCCCCCCCCCcccccccccccccc
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRL 100 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (407)
.++||||||||++||+||+.|+++|++|+|||+++++||+++|++.+.
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~-------------------------------- 50 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQK-------------------------------- 50 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTT--------------------------------
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCC--------------------------------
Confidence 458999999999999999999999999999999999999999976431
Q ss_pred ccCCCCceEEecCCCeEEeeC-cHHHHHHHhcCcccccccccccceeeEccCCceeecCCCHHHHhhhccCChHHHHHHH
Q 015413 101 LSQHPRNFNLDVSGPRVLFCA-DHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLM 179 (407)
Q Consensus 101 ~~~~~~~~~idl~Gp~~~~~~-~~~~~~l~~~g~~~~~~f~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~l~~~~k~~l~ 179 (407)
.+.+|+ |++++... ..+.+++.+.|+..+..+..... +.+ .+|+.+.++... . ..+++.+...+.
T Consensus 51 ------g~~~d~-G~~~~~~~~~~~~~l~~~lgl~~~~~~~~~~~-~~~-~~g~~~~~~~~~----p-~~~~~~~~~~~~ 116 (520)
T 1s3e_A 51 ------VKYVDL-GGSYVGPTQNRILRLAKELGLETYKVNEVERL-IHH-VKGKSYPFRGPF----P-PVWNPITYLDHN 116 (520)
T ss_dssp ------TSCEES-SCCEECTTCHHHHHHHHHTTCCEEECCCSSEE-EEE-ETTEEEEECSSS----C-CCCSHHHHHHHH
T ss_pred ------Cccccc-CceEecCCcHHHHHHHHHcCCcceecccCCce-EEE-ECCEEEEecCCC----C-CCCCHHHHHHHH
Confidence 233677 57777543 47788888999876554432211 222 266666554320 0 012333333444
Q ss_pred HHHHHHHhhcCCCcccccc-ccccccccCCcHHHHHHhcCCChhhHHHHHHHHHhccCCcchhhhhhchhhHHHHHHHHH
Q 015413 180 RFFKLVQGHLSLDESEENN-VRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYN 258 (407)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~ 258 (407)
+++..+.+........... .....++.+.++.+|+++...++.++.++...... .+..++ .++|+...+. ++
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~-~~g~~~--~~~s~~~~~~----~~ 189 (520)
T 1s3e_A 117 NFWRTMDDMGREIPSDAPWKAPLAEEWDNMTMKELLDKLCWTESAKQLATLFVNL-CVTAET--HEVSALWFLW----YV 189 (520)
T ss_dssp HHHHHHHHHHTTSCTTCGGGSTTHHHHHTSBHHHHHHHHCSSHHHHHHHHHHHHH-HHSSCT--TTSBHHHHHH----HH
T ss_pred HHHHHHHHHHhhcCcCCCccccchhhhhccCHHHHHHhhCCCHHHHHHHHHHHhh-hcCCCh--HHhHHHHHHH----HH
Confidence 4444333322111000000 00012356789999999988888887765432111 122232 2356554332 33
Q ss_pred Hhhccc----c-CCCcceEeecCCcchHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE-
Q 015413 259 SSIGRF----Q-NALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL- 332 (407)
Q Consensus 259 ~s~~~~----~-~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~- 332 (407)
...+.+ . ...+...++.||+++|+++|++. .|++|++|++|++|..+ ++++ .|++.+|++++||+||+
T Consensus 190 ~~~g~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~---lg~~i~~~~~V~~i~~~--~~~v-~v~~~~g~~~~ad~VI~a 263 (520)
T 1s3e_A 190 KQCGGTTRIISTTNGGQERKFVGGSGQVSERIMDL---LGDRVKLERPVIYIDQT--RENV-LVETLNHEMYEAKYVISA 263 (520)
T ss_dssp HTTTCHHHHHCSTTSTTSEEETTCTHHHHHHHHHH---HGGGEESSCCEEEEECS--SSSE-EEEETTSCEEEESEEEEC
T ss_pred hhcCchhhhcccCCCcceEEEeCCHHHHHHHHHHH---cCCcEEcCCeeEEEEEC--CCeE-EEEECCCeEEEeCEEEEC
Confidence 222110 0 01123578999999999998764 48899999999999876 5554 58888999999999995
Q ss_pred CCCCCCCCCCccchhhhhhhhhhhcccCCCceEEEEEEEeCCCCCCCC
Q 015413 333 DPSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPDL 380 (407)
Q Consensus 333 ~p~~~~~~~~~~~~p~lp~~~~~~~~~~~~g~~~k~i~i~~~p~~~~~ 380 (407)
.|...+.++ .|+|+||+.+.+..++.+++.+.|+++.|++|||++.
T Consensus 264 ~p~~~l~~l--~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~ 309 (520)
T 1s3e_A 264 IPPTLGMKI--HFNPPLPMMRNQMITRVPLGSVIKCIVYYKEPFWRKK 309 (520)
T ss_dssp SCGGGGGGS--EEESCCCHHHHHHTTSCCBCCEEEEEEECSSCGGGGG
T ss_pred CCHHHHcce--eeCCCCCHHHHHHHHhCCCcceEEEEEEeCCCcccCC
Confidence 466665664 3789999988887788889999999999999998643
No 7
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.96 E-value=6.4e-28 Score=240.69 Aligned_cols=295 Identities=11% Similarity=0.101 Sum_probs=189.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccccchhhhhhhhccCCCCCCCCCCCccccccccccccc
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (407)
+.++||||||||++||+||+.|+++|++|+|||+++++||++.+.+.+|
T Consensus 3 ~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g------------------------------- 51 (453)
T 2yg5_A 3 TLQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTIDG------------------------------- 51 (453)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEETT-------------------------------
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceeccccCC-------------------------------
Confidence 4568999999999999999999999999999999999999999876432
Q ss_pred cccCCCCceEEecCCCeEEee-CcHHHHHHHhcCcccccccccccceeeEccCCceeecCCCHHHHhhhccCChHHHHHH
Q 015413 100 LLSQHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQL 178 (407)
Q Consensus 100 ~~~~~~~~~~idl~Gp~~~~~-~~~~~~~l~~~g~~~~~~f~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~l~~~~k~~l 178 (407)
+.+|+ |++++.. ...+.+++.+.|+..+..+......+. ..+|+.+.++... ..+++.....+
T Consensus 52 --------~~~~~-g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~~~~~~~------~~~~~~~~~~~ 115 (453)
T 2yg5_A 52 --------AVLEI-GGQWVSPDQTALISLLDELGLKTFERYREGESVYI-SSAGERTRYTGDS------FPTNETTKKEM 115 (453)
T ss_dssp --------EEEEC-SCCCBCTTCHHHHHHHHHTTCCEEECCCCSEEEEE-CTTSCEEEECSSS------CSCCHHHHHHH
T ss_pred --------ceecc-CCeEecCccHHHHHHHHHcCCcccccccCCCEEEE-eCCCceeeccCCC------CCCChhhHHHH
Confidence 23455 4555433 346778888899876655543222222 2125554443210 01222222222
Q ss_pred HHHHHHHH----hhcCCCccccccccccccccCCcHHHHHHhcCCChhhHHHHHHHHHhccCCcchhhh-hhchhhHHHH
Q 015413 179 MRFFKLVQ----GHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEY-VLKTRDGINR 253 (407)
Q Consensus 179 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~l~~ 253 (407)
.+++..+. ......++.. .....+.+.++.+|++++..++.++.++.... ...+..++ . ++|+...+.
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~s~~~~~~- 188 (453)
T 2yg5_A 116 DRLIDEMDDLAAQIGAEEPWAH---PLARDLDTVSFKQWLINQSDDAEARDNIGLFI-AGGMLTKP--AHSFSALQAVL- 188 (453)
T ss_dssp HHHHHHHHHHHHHHCSSCGGGS---TTHHHHHSSBHHHHHHHHCSCHHHHHHHHHHH-CCCCCCSC--TTSSBHHHHHH-
T ss_pred HHHHHHHHHHHhhcCCCCCCCC---cchhhhhhccHHHHHHhhcCCHHHHHHHHHHH-HhhcccCC--cccccHHHHHH-
Confidence 22222111 1111111100 00123457899999999888888887654332 12233333 2 366654333
Q ss_pred HHHHHHhhcccc----CCCcceEeecCCcchHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCE
Q 015413 254 LALYNSSIGRFQ----NALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHK 329 (407)
Q Consensus 254 ~~~~~~s~~~~~----~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~ 329 (407)
++...+.+. ...+...+++||+++|+++|++. .|++|++|++|++|..+ +++.+.|++ +|++++||+
T Consensus 189 ---~~~~~g~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~---lg~~i~~~~~V~~i~~~--~~~~v~v~~-~~~~~~ad~ 259 (453)
T 2yg5_A 189 ---MAASAGSFSHLVDEDFILDKRVIGGMQQVSIRMAEA---LGDDVFLNAPVRTVKWN--ESGATVLAD-GDIRVEASR 259 (453)
T ss_dssp ---HHHHTTCHHHHHCHHHHTCEEETTCTHHHHHHHHHH---HGGGEECSCCEEEEEEE--TTEEEEEET-TTEEEEEEE
T ss_pred ---HhccCCcHhhhccCCCcceEEEcCChHHHHHHHHHh---cCCcEEcCCceEEEEEe--CCceEEEEE-CCeEEEcCE
Confidence 222211110 00012568999999999998764 48899999999999986 554245764 788899999
Q ss_pred EEE-CCCCCCCCCCccchhhhhhhhhhhcccCCCceEEEEEEEeCCCCCCC
Q 015413 330 LVL-DPSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPD 379 (407)
Q Consensus 330 VI~-~p~~~~~~~~~~~~p~lp~~~~~~~~~~~~g~~~k~i~i~~~p~~~~ 379 (407)
||+ .|...+.++. |+|+||+.+.+..++.+++.+.|+.+.|++|||+.
T Consensus 260 VI~a~p~~~~~~l~--~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w~~ 308 (453)
T 2yg5_A 260 VILAVPPNLYSRIS--YDPPLPRRQHQMHQHQSLGLVIKVHAVYETPFWRE 308 (453)
T ss_dssp EEECSCGGGGGGSE--EESCCCHHHHHHGGGEEECCEEEEEEEESSCGGGG
T ss_pred EEEcCCHHHHhcCE--eCCCCCHHHHHHHhcCCCcceEEEEEEECCCCCCC
Confidence 995 4666666643 68999998777777788999999999999999854
No 8
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.95 E-value=3.5e-27 Score=238.07 Aligned_cols=296 Identities=15% Similarity=0.101 Sum_probs=190.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccccchhhhhhhhccCCCCCCCCCCCcccccccccccccccc
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLLS 102 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (407)
+||||||||++||+||..|+++|++|+|||+++++||+++|++.+|
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g---------------------------------- 85 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSNIDG---------------------------------- 85 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEEETT----------------------------------
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecccCC----------------------------------
Confidence 8999999999999999999999999999999999999999976432
Q ss_pred CCCCceEEecCCCeEEee-CcHHHHHHHhcCccccccccc----ccceeeEccC--CceeecCCCHHHHhhhccCChHHH
Q 015413 103 QHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKS----IDATFMLDAD--AKLCSVPDSRAAIFKDKSLGLMEK 175 (407)
Q Consensus 103 ~~~~~~~idl~Gp~~~~~-~~~~~~~l~~~g~~~~~~f~~----~~~~~~~~~~--g~~~~~p~~~~~~~~~~~l~~~~k 175 (407)
+.+|+ |++++.. ...+.+++.+.|+.+.+.... ....|.+. + |+...+|.. +... .-.
T Consensus 86 -----~~~d~-G~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~--~~~~------~~~ 150 (495)
T 2vvm_A 86 -----YPYEM-GGTWVHWHQSHVWREITRYKMHNALSPSFNFSRGVNHFQLR-TNPTTSTYMTHE--AEDE------LLR 150 (495)
T ss_dssp -----EEEEC-SCCCBCTTSHHHHHHHHHTTCTTCEEESCCCSSSCCEEEEE-SSTTCCEEECHH--HHHH------HHH
T ss_pred -----eeecC-CCeEecCccHHHHHHHHHcCCcceeecccccCCCceEEEec-CCCCceeecCHH--HHHH------HHH
Confidence 34677 5777653 447888888888865443332 22234333 3 455555431 1110 001
Q ss_pred HHHHHHHH----HHHhhcCCCccccccccccccccCCcHHHHHHhcC--CChhhHHHHHHHHHhccCCcchhhhhhchhh
Q 015413 176 NQLMRFFK----LVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMK--LPHKIKSIVLYAIAMADYDQEVSEYVLKTRD 249 (407)
Q Consensus 176 ~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 249 (407)
..+.+|++ ..+.... .+...........+.+.|+.+||++++ .++.++.++...+... +..++ .++|+..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~s~~~ 226 (495)
T 2vvm_A 151 SALHKFTNVDGTNGRTVLP-FPHDMFYVPEFRKYDEMSYSERIDQIRDELSLNERSSLEAFILLC-SGGTL--ENSSFGE 226 (495)
T ss_dssp HHHHHHHCSSSSTTTTTCS-CTTSTTSSTTHHHHHTSBHHHHHHHHGGGCCHHHHHHHHHHHHHH-HSSCT--TTSBHHH
T ss_pred HHHHHHHccchhhhhhcCC-CCCCcccCcchhhhhhhhHHHHHHHhhccCCHHHHHHHHHHHHHh-cCCCc--chhhHHH
Confidence 11122222 0111100 000000000112345789999999887 7887776654322111 11222 2356544
Q ss_pred HHHHHHHHHHhhccccCCCcceEeecCCcchHHHHHHHHHHhcC-cEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcC
Q 015413 250 GINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKG-CLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSH 328 (407)
Q Consensus 250 ~l~~~~~~~~s~~~~~~~~~~~~~p~gG~~~l~~al~r~~~~~G-g~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad 328 (407)
.+..+......+..+.. ....++++||+++|+++|++.+...| ++|+++++|++|..+ ++. +.|++.+|++++||
T Consensus 227 ~~~~~~~~~~~~~~~~~-~~~~~~~~gG~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~--~~~-v~v~~~~g~~~~ad 302 (495)
T 2vvm_A 227 FLHWWAMSGYTYQGCMD-CLMSYKFKDGQSAFARRFWEEAAGTGRLGYVFGCPVRSVVNE--RDA-ARVTARDGREFVAK 302 (495)
T ss_dssp HHHHHHHTTSSHHHHHH-HHHSEEETTCHHHHHHHHHHHHHTTTCEEEESSCCEEEEEEC--SSS-EEEEETTCCEEEEE
T ss_pred HHHHHHHcCCCHHHHHh-hhceEEeCCCHHHHHHHHHHHhhhcCceEEEeCCEEEEEEEc--CCE-EEEEECCCCEEEcC
Confidence 33322111000000000 01256899999999999999998888 999999999999875 444 46888888899999
Q ss_pred EEEE-CCCCCCCCCCccchhhhhhhhhhhcccCCCceEEEEEEEeCCCCC
Q 015413 329 KLVL-DPSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLK 377 (407)
Q Consensus 329 ~VI~-~p~~~~~~~~~~~~p~lp~~~~~~~~~~~~g~~~k~i~i~~~p~~ 377 (407)
+||+ .|...+.++ .|+|+||+.+.+..+...++.+.|+++.|++|+|
T Consensus 303 ~vI~a~~~~~l~~i--~~~p~lp~~~~~ai~~~~~~~~~kv~l~~~~~~~ 350 (495)
T 2vvm_A 303 RVVCTIPLNVLSTI--QFSPALSTERISAMQAGHVSMCTKVHAEVDNKDM 350 (495)
T ss_dssp EEEECCCGGGGGGS--EEESCCCHHHHHHHHHCCCCCCEEEEEEESCGGG
T ss_pred EEEECCCHHHHhhe--eeCCCCCHHHHHHHHhcCCCceeEEEEEECCccC
Confidence 9995 465665664 4789999987777677889999999999999986
No 9
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.95 E-value=7.6e-27 Score=234.49 Aligned_cols=287 Identities=16% Similarity=0.194 Sum_probs=189.3
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccccchhhhhhhhccCCCCCCCCCCCccccccccccccccc
Q 015413 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLL 101 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (407)
.+||||||||++||+||+.|+++|++|+|||+++++||+++|++.+|
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g--------------------------------- 62 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALAG--------------------------------- 62 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEETT---------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeeccCC---------------------------------
Confidence 57999999999999999999999999999999999999999986533
Q ss_pred cCCCCceEEecCCCeEEee-CcHHHHHHHhcCccccccccc--ccceeeEccCCceeecCCCHHHHhhhccCChHHHHHH
Q 015413 102 SQHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKS--IDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQL 178 (407)
Q Consensus 102 ~~~~~~~~idl~Gp~~~~~-~~~~~~~l~~~g~~~~~~f~~--~~~~~~~~~~g~~~~~p~~~~~~~~~~~l~~~~k~~l 178 (407)
+.+|. |++++.. ...+.+++.+.|+...+.+.. ....+++. +|+.+.+|.+..+++....++..++.++
T Consensus 63 ------~~~~~-g~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~-~g~~~~~p~~~~~~~~~~~~~~~~~~~~ 134 (478)
T 2ivd_A 63 ------YLVEQ-GPNSFLDREPATRALAAALNLEGRIRAADPAAKRRYVYT-RGRLRSVPASPPAFLASDILPLGARLRV 134 (478)
T ss_dssp ------EEEES-SCCCEETTCHHHHHHHHHTTCGGGEECSCSSCCCEEEEE-TTEEEECCCSHHHHHTCSSSCHHHHHHH
T ss_pred ------eeeec-ChhhhhhhhHHHHHHHHHcCCcceeeecCccccceEEEE-CCEEEECCCCHHHhccCCCCCHHHHHHH
Confidence 34677 5877755 347788899999876655432 12234443 7888888887766665445544333221
Q ss_pred HHHHHHHHhhcCCCccccccccccccccCCcHHHHHHhcCCChhhH-HHHHHH-HHhccCCcchhhhhhchhhHHHHHHH
Q 015413 179 MRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIK-SIVLYA-IAMADYDQEVSEYVLKTRDGINRLAL 256 (407)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~s~~~~l~~~~~ 256 (407)
+....... .....+.++.+|+++. +.+... .++... ... +..++ .++|+...+..+..
T Consensus 135 ------~~~~~~~~---------~~~~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~--~~~~~--~~~s~~~~~~~~~~ 194 (478)
T 2ivd_A 135 ------AGELFSRR---------APEGVDESLAAFGRRH-LGHRATQVLLDAVQTGI--YAGDV--EQLSVAATFPMLVK 194 (478)
T ss_dssp ------HGGGGCCC---------CCTTCCCBHHHHHHHH-TCHHHHHHTHHHHHHHH--HCCCT--TTBBHHHHCHHHHH
T ss_pred ------hhhhhcCC---------CCCCCCCCHHHHHHHh-hCHHHHHHHHHHHhcee--ecCCH--HHhhHHHHhHHHHH
Confidence 22221110 0124568999999875 344333 333211 111 12222 23555444433332
Q ss_pred HHHhhcc-------c----------cCCC----cceEeecCCcchHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEE
Q 015413 257 YNSSIGR-------F----------QNAL----GALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYK 315 (407)
Q Consensus 257 ~~~s~~~-------~----------~~~~----~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~ 315 (407)
+....+. . .... +.+++++||+++|+++|++.+ |++|+++++|++|..+ +++ +
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l---g~~i~~~~~V~~i~~~--~~~-~ 268 (478)
T 2ivd_A 195 MEREHRSLILGAIRAQKAQRQAALPAGTAPKLSGALSTFDGGLQVLIDALAASL---GDAAHVGARVEGLARE--DGG-W 268 (478)
T ss_dssp HHHHHSSHHHHHHHHHHHHTCC----CCSCCCCCCEEEETTCTHHHHHHHHHHH---GGGEESSEEEEEEECC----C-C
T ss_pred HHHhcCcHHHHHHHhhhccccccCcccccccccccEEEECCCHHHHHHHHHHHh---hhhEEcCCEEEEEEec--CCe-E
Confidence 2111000 0 0000 237899999999999998754 7899999999999876 444 5
Q ss_pred EEEe---CCCcEEEcCEEEE-CCCCCCCCCCccchhhhhhhhhhhcccCCCceEEEEEEEeCCCCCCC
Q 015413 316 GVRL---ASGQDILSHKLVL-DPSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPD 379 (407)
Q Consensus 316 gV~~---~~G~~i~Ad~VI~-~p~~~~~~~~~~~~p~lp~~~~~~~~~~~~g~~~k~i~i~~~p~~~~ 379 (407)
+|++ .+|++++||+||+ .|...+.++ .|+||+.+.+..+...++.+.|+++.+++|+|+.
T Consensus 269 ~v~~~~~~~g~~~~ad~vV~a~~~~~~~~l----l~~l~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~ 332 (478)
T 2ivd_A 269 RLIIEEHGRRAELSVAQVVLAAPAHATAKL----LRPLDDALAALVAGIAYAPIAVVHLGFDAGTLPA 332 (478)
T ss_dssp EEEEEETTEEEEEECSEEEECSCHHHHHHH----HTTTCHHHHHHHHTCCBCCEEEEEEEECTTSSCC
T ss_pred EEEEeecCCCceEEcCEEEECCCHHHHHHH----hhccCHHHHHHHhcCCCCcEEEEEEEEccccCCC
Confidence 7877 6788899999995 455544443 3668877666667778999999999999998764
No 10
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.94 E-value=6.4e-26 Score=227.58 Aligned_cols=297 Identities=13% Similarity=0.095 Sum_probs=182.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC--eEEEEccCCCCCCcccccchhhhhhhhccCCCCCCCCCCCcccccccccccccc
Q 015413 23 FDLIVIGTGLPESVISAAASASGK--SVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRL 100 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~--~VlvlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (407)
+||||||||++||+||+.|+++|+ +|+|||+++++||+++|....
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t~~~~--------------------------------- 49 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGP--------------------------------- 49 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCEEECT---------------------------------
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEEEecc---------------------------------
Confidence 699999999999999999999999 999999999999999986532
Q ss_pred ccCCCCceEEecCCCeEEeeC----cHHHHHHHhcCccccccccc-----ccceeeEccCCceeecCCCHHHHhhh-ccC
Q 015413 101 LSQHPRNFNLDVSGPRVLFCA----DHAVDLMLKSGASHYLEFKS-----IDATFMLDADAKLCSVPDSRAAIFKD-KSL 170 (407)
Q Consensus 101 ~~~~~~~~~idl~Gp~~~~~~----~~~~~~l~~~g~~~~~~f~~-----~~~~~~~~~~g~~~~~p~~~~~~~~~-~~l 170 (407)
..+.+|. |++.+... ..+.+++.+.|+...+.... ....|++. +|+.+++|.+...++.. ..+
T Consensus 50 -----~g~~~d~-G~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~~~~~~~~~~~~~~-~g~~~~~p~~~~~~~~~~~~~ 122 (477)
T 3nks_A 50 -----NGAIFEL-GPRGIRPAGALGARTLLLVSELGLDSEVLPVRGDHPAAQNRFLYV-GGALHALPTGLRGLLRPSPPF 122 (477)
T ss_dssp -----TSCEEES-SCCCBCCCHHHHHHHHHHHHHTTCGGGEEEECTTSHHHHCEEEEE-TTEEEECCCSSCC---CCTTS
T ss_pred -----CCeEEEe-CCCcccCCCcccHHHHHHHHHcCCcceeeecCCCCchhcceEEEE-CCEEEECCCChhhcccccchh
Confidence 1234666 47765443 25678888888865433221 11235554 78888888754333321 111
Q ss_pred ChHHHHHHHHHHHHHHhhcCCCccccccccccccccCCcHHHHHHhcCCChhhHHHHHHHHHhccCCcchhhhhhchhhH
Q 015413 171 GLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDG 250 (407)
Q Consensus 171 ~~~~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 250 (407)
.. ..+.+ .+..... + .....+.++.+|+++. +.+.+.+.+...+....+..++ .++|+...
T Consensus 123 ~~---~~~~~---~~~~~~~--~--------~~~~~~~s~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~--~~ls~~~~ 183 (477)
T 3nks_A 123 SK---PLFWA---GLRELTK--P--------RGKEPDETVHSFAQRR-LGPEVASLAMDSLCRGVFAGNS--RELSIRSC 183 (477)
T ss_dssp CS---CSSHH---HHTTTTS--C--------CCCSSCCBHHHHHHHH-HCHHHHHHTHHHHHHHHHSSCT--TTBBHHHH
T ss_pred hh---HHHHH---HHHhhhc--C--------CCCCCCcCHHHHHHHh-hCHHHHHHHHHHHhcccccCCH--HHhhHHHH
Confidence 11 11111 1112111 0 1123567999999863 3333333222111101122222 23666555
Q ss_pred HHHHHHHHHhhccc----------------------cCCCcceEeecCCcchHHHHHHHHHHhcCcEEEeCCceeEEEEe
Q 015413 251 INRLALYNSSIGRF----------------------QNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTD 308 (407)
Q Consensus 251 l~~~~~~~~s~~~~----------------------~~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~ 308 (407)
+..+..+....+.. ......+++++||++.|+++|++.+...|++|+++++|++|..+
T Consensus 184 ~~~l~~~e~~~gsl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~ 263 (477)
T 3nks_A 184 FPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALAERWSQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQ 263 (477)
T ss_dssp CHHHHHHHHHHSCHHHHHHHC-----CCCCHHHHHHHHTTCSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEEC
T ss_pred HHHHHHHHHHcCCHHHHHHHhcccccCCchhhhhhhcccCccEEEECCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEc
Confidence 44433321111100 00012378999999999999999999999999999999999886
Q ss_pred cCCCcEEEEEeCCCcEEEcCEEEE-CCCCCCCCCCccchhhhhhhhhhhcccCCCceEEEEEEEeCCCCCCCCCcEEE
Q 015413 309 QNSGSYKGVRLASGQDILSHKLVL-DPSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPDLSNFLV 385 (407)
Q Consensus 309 ~~~g~~~gV~~~~G~~i~Ad~VI~-~p~~~~~~~~~~~~p~lp~~~~~~~~~~~~g~~~k~i~i~~~p~~~~~~~~~~ 385 (407)
+++.+.|++ ++++++||+||+ .|...+.++. |++++......+..+++.+.++.+.|++|+++..+..++
T Consensus 264 --~~~~~~v~~-~~~~~~ad~vv~a~p~~~~~~ll----~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~g~l 334 (477)
T 3nks_A 264 --AEGRWKVSL-RDSSLEADHVISAIPASVLSELL----PAEAAPLARALSAITAVSVAVVNLQYQGAHLPVQGFGHL 334 (477)
T ss_dssp --GGGCEEEEC-SSCEEEESEEEECSCHHHHHHHS----CGGGHHHHHHHHTCCEEEEEEEEEEETTCCCSSCSSEEE
T ss_pred --CCceEEEEE-CCeEEEcCEEEECCCHHHHHHhc----cccCHHHHHHHhcCCCCcEEEEEEEECCCCCCCCCceEE
Confidence 444357764 666899999995 4665545442 222333333335567899999999999999865555444
No 11
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.94 E-value=5e-25 Score=217.80 Aligned_cols=277 Identities=13% Similarity=0.073 Sum_probs=175.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccccchhhhhhhhccCCCCCCCCCCCcccccccccccccccc
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLLS 102 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (407)
+||||||||++||+||+.|+++|++|+||||++++||++.++..+|
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~G---------------------------------- 46 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFTNLSYKG---------------------------------- 46 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSSEEEETT----------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCceeeeccCC----------------------------------
Confidence 5899999999999999999999999999999999999999976544
Q ss_pred CCCCceEEecCCCeEEee---CcHHHHHHHhcCcccccccccccceeeEc-cC--------CceeecCCCHHHHhhhccC
Q 015413 103 QHPRNFNLDVSGPRVLFC---ADHAVDLMLKSGASHYLEFKSIDATFMLD-AD--------AKLCSVPDSRAAIFKDKSL 170 (407)
Q Consensus 103 ~~~~~~~idl~Gp~~~~~---~~~~~~~l~~~g~~~~~~f~~~~~~~~~~-~~--------g~~~~~p~~~~~~~~~~~l 170 (407)
|.+|. ||+.+.. ...+.+++.+.|....+.... .....+. .+ ++.+.++. . ...+
T Consensus 47 -----~~~d~-G~~~~~~~~~~~~~~~l~~~lg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~ 113 (425)
T 3ka7_A 47 -----FQLSS-GAFHMLPNGPGGPLACFLKEVEASVNIVRSE-MTTVRVPLKKGNPDYVKGFKDISFND----F--PSLL 113 (425)
T ss_dssp -----EEEES-SSCSCBTTGGGSHHHHHHHHTTCCCCEEECC-CCEEEEESSTTCCSSTTCEEEEEGGG----G--GGGS
T ss_pred -----cEEcC-CCceEecCCCccHHHHHHHHhCCCceEEecC-CceEEeecCCCcccccccccceehhh----h--hhhC
Confidence 33444 3443321 125667777777654322221 1111111 01 33333321 1 1245
Q ss_pred ChHHHHHHHHHHHHHHhhcCCCccccccccccccccCCcHHHHHHhcCCChhhHHHHHHHH-HhccCCcchhhhhhchhh
Q 015413 171 GLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAI-AMADYDQEVSEYVLKTRD 249 (407)
Q Consensus 171 ~~~~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~ 249 (407)
++.++..+...+..+.. ....+.++.+|++++..++.++.++.... ... ..++ .++|+..
T Consensus 114 ~~~~~~~~~~~~~~~~~---------------~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~s~~~ 174 (425)
T 3ka7_A 114 SYKDRMKIALLIVSTRK---------------NRPSGSSLQAWIKSQVSDEWLIKFADSFCGWAL--SLKS--DEVPVEE 174 (425)
T ss_dssp CHHHHHHHHHHHHHTTT---------------SCCCSSBHHHHHHHHCCCHHHHHHHHHHHHHHH--SSCG--GGSBHHH
T ss_pred CHHHHHHHHHHHHhhhh---------------cCCCCCCHHHHHHHhcCCHHHHHHHHHHHHHHh--CCCc--ccchHHH
Confidence 56666655443322110 01245789999998766666666543211 111 1222 2356544
Q ss_pred HHHHHHHHHHhhccccCCCcceEeecCCcchHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCE
Q 015413 250 GINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHK 329 (407)
Q Consensus 250 ~l~~~~~~~~s~~~~~~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~ 329 (407)
.+..+..+ ..++ ...+++||++.|+++|++.+++.|++|+++++|++|..+ ++++++|++ +|++++||+
T Consensus 175 ~~~~~~~~----~~~~----~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~--~~~~~gv~~-~g~~~~ad~ 243 (425)
T 3ka7_A 175 VFEIIENM----YRFG----GTGIPEGGCKGIIDALETVISANGGKIHTGQEVSKILIE--NGKAAGIIA-DDRIHDADL 243 (425)
T ss_dssp HHHHHHHH----HHHC----SCEEETTSHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE--TTEEEEEEE-TTEEEECSE
T ss_pred HHHHHHHH----HhcC----CccccCCCHHHHHHHHHHHHHHcCCEEEECCceeEEEEE--CCEEEEEEE-CCEEEECCE
Confidence 44433322 1222 156899999999999999999999999999999999987 778878886 588899999
Q ss_pred EEE-CCCCCCCCCCccchhhh--hhhhhhhcccCCCceEEEEEEEeCCCCC
Q 015413 330 LVL-DPSFTVPGSLASSHQQL--QESFQAFSLSDNKGKVARGICITRSSLK 377 (407)
Q Consensus 330 VI~-~p~~~~~~~~~~~~p~l--p~~~~~~~~~~~~g~~~k~i~i~~~p~~ 377 (407)
||+ .|...+.++. +..+.+ |+.+....++..+..+.++.+.+++++.
T Consensus 244 VV~a~~~~~~~~ll-~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~ 293 (425)
T 3ka7_A 244 VISNLGHAATAVLC-SEALSKEADAAYFKMVGTLQPSAGIKICLAADEPLV 293 (425)
T ss_dssp EEECSCHHHHHHHT-TTTCCTTTTHHHHHHHHHCCCBEEEEEEEEESSCSS
T ss_pred EEECCCHHHHHHhc-CCcccccCCHHHHHHhhCcCCCceEEEEeecCCCcc
Confidence 995 3444333432 112222 4443333345557778899999999865
No 12
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.93 E-value=3.3e-25 Score=222.45 Aligned_cols=289 Identities=16% Similarity=0.189 Sum_probs=183.8
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCC--CeEEEEccCCCCCCcccccchhhhhhhhccCCCCCCCCCCCccccccccccc
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASG--KSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYA 97 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G--~~VlvlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (407)
|.++||||||||++||+||+.|+++| ++|+|||+++++||++.|....|
T Consensus 2 m~~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~~~g----------------------------- 52 (475)
T 3lov_A 2 MSSKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYREDG----------------------------- 52 (475)
T ss_dssp CCSCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEECSTT-----------------------------
T ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEeeCC-----------------------------
Confidence 44689999999999999999999999 99999999999999999876533
Q ss_pred cccccCCCCceEEecCCCeEEee-CcHHHHHHHhcCcccccccccccceeeEccCCceeecCCC--------HHHHhhhc
Q 015413 98 SRLLSQHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDS--------RAAIFKDK 168 (407)
Q Consensus 98 ~~~~~~~~~~~~idl~Gp~~~~~-~~~~~~~l~~~g~~~~~~f~~~~~~~~~~~~g~~~~~p~~--------~~~~~~~~ 168 (407)
+.+|. |++++.. ...+.+++.+.|+...+........+++. +|+...+|.+ ...++...
T Consensus 53 ----------~~~~~-g~~~~~~~~~~~~~l~~~lg~~~~~~~~~~~~~~~~~-~g~~~~~p~~~~~~~p~~~~~~~~~~ 120 (475)
T 3lov_A 53 ----------FTIER-GPDSYVARKHILTDLIEAIGLGEKLVRNNTSQAFILD-TGGLHPIPKGAVMGIPTDLDLFRQTT 120 (475)
T ss_dssp ----------CCEES-SCCCEETTSTHHHHHHHHTTCGGGEEECCCCCEEEEE-TTEEEECCSSEETTEESCHHHHTTCS
T ss_pred ----------EEEec-CchhhhcccHHHHHHHHHcCCcceEeecCCCceEEEE-CCEEEECCCcccccCcCchHHHhhcc
Confidence 22455 4655533 34788889999987665543233344444 6777776643 34455555
Q ss_pred cCChHHHHHHHHHHHHHHhhcCCCccccccccccccccCCcHHHHHHhcCCChhhHHHHHHHHHhccCCcchhhhhhchh
Q 015413 169 SLGLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTR 248 (407)
Q Consensus 169 ~l~~~~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 248 (407)
.++..++..+ ......... . ......+.++.+|+++. ..+...+.+...+....+..++ .++|+.
T Consensus 121 ~~~~~~~~~~---~~~~~~~~~--~-------~~~~~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~--~~ls~~ 185 (475)
T 3lov_A 121 LLTEEEKQEV---ADLLLHPSD--S-------LRIPEQDIPLGEYLRPR-LGDALVEKLIEPLLSGIYAGNI--DQMSTF 185 (475)
T ss_dssp SSCHHHHHHH---HHHHHSCCT--T-------CCCCSSCCBHHHHHHHH-HCHHHHHHTHHHHHHGGGCCCT--TTSBST
T ss_pred CCChhHHHHh---hCcccCCcc--c-------ccCCCCCcCHHHHHHHH-hCHHHHHHHHHHHhceeecCCh--HHcCHH
Confidence 6665555421 121111100 0 01134568999999864 3333333222211111123332 236655
Q ss_pred hHHHHHHHHHHhhccc-------c-------------CCCcceEeecCCcchHHHHHHHHHHhcCcEEEeCCceeEEEEe
Q 015413 249 DGINRLALYNSSIGRF-------Q-------------NALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTD 308 (407)
Q Consensus 249 ~~l~~~~~~~~s~~~~-------~-------------~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~ 308 (407)
..+..+..+....+.+ . ...+.+.+++||++.|+++|++.+.. ++|+++++|++|..+
T Consensus 186 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~ 263 (475)
T 3lov_A 186 ATYPQFVANEQKAGSLFEGMRLMRPLDQLPQTPQTTIKATGQFLSLETGLESLIERLEEVLER--SEIRLETPLLAISRE 263 (475)
T ss_dssp TTCHHHHHHHHHHSSHHHHHHHTCC--------------CCSEEEETTCHHHHHHHHHHHCSS--CEEESSCCCCEEEEE
T ss_pred HHHHHHHHHHHhcCcHHHHHHHhcccccccccccccccCCCcEEeeCChHHHHHHHHHhhccC--CEEEcCCeeeEEEEe
Confidence 4444443322211110 0 00134788999999999988865433 799999999999986
Q ss_pred cCCCcEEEEEeCCCcEEEcCEEEE-CCCCCCCCCCccchhhhhhhhhhhcccCCCceEEEEEEEeCCCCC
Q 015413 309 QNSGSYKGVRLASGQDILSHKLVL-DPSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLK 377 (407)
Q Consensus 309 ~~~g~~~gV~~~~G~~i~Ad~VI~-~p~~~~~~~~~~~~p~lp~~~~~~~~~~~~g~~~k~i~i~~~p~~ 377 (407)
+++ +.|++.+| +++||+||+ .|...+.++. ++|++ ...+..+++.+.++++.|++|++
T Consensus 264 --~~~-~~v~~~~g-~~~ad~vV~a~p~~~~~~ll--~~~~~-----~~~~~~~~~~~~~v~l~~~~~~~ 322 (475)
T 3lov_A 264 --DGR-YRLKTDHG-PEYADYVLLTIPHPQVVQLL--PDAHL-----PELEQLTTHSTATVTMIFDQQQS 322 (475)
T ss_dssp --TTE-EEEECTTC-CEEESEEEECSCHHHHHHHC--TTSCC-----HHHHTCCEEEEEEEEEEEECCSS
T ss_pred --CCE-EEEEECCC-eEECCEEEECCCHHHHHHHc--CccCH-----HHHhcCCCCeEEEEEEEECCcCC
Confidence 555 56887788 899999995 5666555543 23333 33356679999999999999984
No 13
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.93 E-value=1.4e-25 Score=224.23 Aligned_cols=286 Identities=13% Similarity=0.165 Sum_probs=171.9
Q ss_pred cccEEEECCChhHHHHHHHHhhCC------CeEEEEccCCCCCCcccccchhhhhhhhccCCCCCCCCCCCccccccccc
Q 015413 22 AFDLIVIGTGLPESVISAAASASG------KSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISN 95 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G------~~VlvlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (407)
++||||||||++||+||+.|+++| ++|+|||+++++||++.|...++
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~~~g--------------------------- 57 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVKKDG--------------------------- 57 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEECCTT---------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEeccCC---------------------------
Confidence 489999999999999999999999 99999999999999999976533
Q ss_pred cccccccCCCCceEEecCCCeEEee-CcHHHHHHHhcCcccccccccccceeeEccCCceeecCCCH--------HHHhh
Q 015413 96 YASRLLSQHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSR--------AAIFK 166 (407)
Q Consensus 96 ~~~~~~~~~~~~~~idl~Gp~~~~~-~~~~~~~l~~~g~~~~~~f~~~~~~~~~~~~g~~~~~p~~~--------~~~~~ 166 (407)
+.+|. |++++.. ...+.+++.+.|+...+........+++. +|+...+|.+. ..++.
T Consensus 58 ------------~~~d~-G~~~~~~~~~~~~~l~~~lgl~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~p~~~~~~~~ 123 (470)
T 3i6d_A 58 ------------YIIER-GPDSFLERKKSAPQLVKDLGLEHLLVNNATGQSYVLV-NRTLHPMPKGAVMGIPTKIAPFVS 123 (470)
T ss_dssp ------------CCEES-SCCCEETTCTHHHHHHHHTTCCTTEEECCCCCEEEEC-SSCEEECCC---------------
T ss_pred ------------EEecc-ChhhhhhCCHHHHHHHHHcCCcceeecCCCCccEEEE-CCEEEECCCCcccCCcCchHHhhc
Confidence 23556 4655533 34688889999987765533233345544 67777776531 11111
Q ss_pred hccCChHHHHHHHHHHHHHHhhcCCCccccccccccccccCCcHHHHHHhcCCChhhHH-HHHH-HHHhccCCcchhhhh
Q 015413 167 DKSLGLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKS-IVLY-AIAMADYDQEVSEYV 244 (407)
Q Consensus 167 ~~~l~~~~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~ 244 (407)
...++..++.+ ....... .. .....+.++.+|+++. ......+ ++.. ..+. +..++ .+
T Consensus 124 ~~~~~~~~~~~--~~~~~~~---~~----------~~~~~~~s~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~--~~ 183 (470)
T 3i6d_A 124 TGLFSLSGKAR--AAMDFIL---PA----------SKTKDDQSLGEFFRRR-VGDEVVENLIEPLLSGI--YAGDI--DK 183 (470)
T ss_dssp ------CCSHH--HHHHHHS---CC----------CSSSSCCBHHHHHHHH-SCHHHHHHTHHHHHHHT--TCSCT--TT
T ss_pred cCcCCHHHHHH--HhcCccc---CC----------CCCCCCcCHHHHHHHh-cCHHHHHHhccchhcEE--ecCCH--HH
Confidence 11121111111 0011110 00 1234568999999874 3433333 3222 1122 23332 23
Q ss_pred hchhhHHHHHHHHHHhhcccc-----------------CCCcceEeecCCcchHHHHHHHHHHhcCcEEEeCCceeEEEE
Q 015413 245 LKTRDGINRLALYNSSIGRFQ-----------------NALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLT 307 (407)
Q Consensus 245 ~s~~~~l~~~~~~~~s~~~~~-----------------~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~ 307 (407)
+++...+..+..+....+... ...+.+.+++||++.|+++|++.+.. ++|+++++|++|..
T Consensus 184 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~--~~i~~~~~V~~i~~ 261 (470)
T 3i6d_A 184 LSLMSTFPQFYQTEQKHRSLILGMKKTRPQGSGQQLTAKKQGQFQTLSTGLQTLVEEIEKQLKL--TKVYKGTKVTKLSH 261 (470)
T ss_dssp BBHHHHCGGGCC-------------------------------EEEETTCTHHHHHHHHHTCCS--EEEECSCCEEEEEE
T ss_pred hhHHHHHHHHHHHHHhcCcHHHHHHhhccccccccccccCCceEEEeCChHHHHHHHHHHhcCC--CEEEeCCceEEEEE
Confidence 554433222111111000000 00124778999999999988764432 79999999999998
Q ss_pred ecCCCcEEEEEeCCCcEEEcCEEEE-CCCCCCCCCCccchhhhhhhhhhhcccCCCceEEEEEEEeCCCCCCC
Q 015413 308 DQNSGSYKGVRLASGQDILSHKLVL-DPSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPD 379 (407)
Q Consensus 308 ~~~~g~~~gV~~~~G~~i~Ad~VI~-~p~~~~~~~~~~~~p~lp~~~~~~~~~~~~g~~~k~i~i~~~p~~~~ 379 (407)
+ +++ +.|++.+|++++||+||+ .|...+.++. +.|+++ ...+..+++.+.++++.|++|+|+.
T Consensus 262 ~--~~~-~~v~~~~g~~~~ad~vi~a~p~~~~~~l~--~~~~~~----~~~~~~~~~~~~~v~l~~~~~~~~~ 325 (470)
T 3i6d_A 262 S--GSC-YSLELDNGVTLDADSVIVTAPHKAAAGML--SELPAI----SHLKNMHSTSVANVALGFPEGSVQM 325 (470)
T ss_dssp C--SSS-EEEEESSSCEEEESEEEECSCHHHHHHHT--TTSTTH----HHHHTCEEEEEEEEEEEESSTTCCC
T ss_pred c--CCe-EEEEECCCCEEECCEEEECCCHHHHHHHc--CCchhh----HHHhcCCCCceEEEEEEECchhcCC
Confidence 6 444 578888998999999995 5666545543 233332 2335567999999999999999853
No 14
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.93 E-value=2.9e-25 Score=224.44 Aligned_cols=295 Identities=12% Similarity=0.095 Sum_probs=180.9
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccccchhhhhhhhccCCCCCCCCCCCccccccccccccc
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (407)
...+||||||||++||+||+.|+++|++|+|||+++++||+++|++.+|
T Consensus 11 ~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g------------------------------- 59 (504)
T 1sez_A 11 SSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDG------------------------------- 59 (504)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETT-------------------------------
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccCC-------------------------------
Confidence 3468999999999999999999999999999999999999999976433
Q ss_pred cccCCCCceEEecCCCeEEee-CcHHHHHHHhcCccccccccccc-ceeeEccCCceeecCCCHHHHhhhccCChHHHHH
Q 015413 100 LLSQHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKSID-ATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQ 177 (407)
Q Consensus 100 ~~~~~~~~~~idl~Gp~~~~~-~~~~~~~l~~~g~~~~~~f~~~~-~~~~~~~~g~~~~~p~~~~~~~~~~~l~~~~k~~ 177 (407)
+.+|. |++++.. ...+.+++.++|+...+.|.... ..+++. +|+.+.+|.+...++....++..++.+
T Consensus 60 --------~~~~~-g~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~~~-~g~~~~~p~~~~~~~~~~~~~~~~~~~ 129 (504)
T 1sez_A 60 --------LIWDE-GANTMTESEGDVTFLIDSLGLREKQQFPLSQNKRYIAR-NGTPVLLPSNPIDLIKSNFLSTGSKLQ 129 (504)
T ss_dssp --------EEEES-SCCCBCCCSHHHHHHHHHTTCGGGEECCSSCCCEEEES-SSSEEECCSSHHHHHHSSSSCHHHHHH
T ss_pred --------eEEec-CCcccccCcHHHHHHHHHcCCcccceeccCCCceEEEE-CCeEEECCCCHHHHhccccCCHHHHHH
Confidence 34666 5776654 34788899999998776664322 234443 788888998766666555555544433
Q ss_pred HHHHHHHHHhhcCCCccccccccccccccCCcHHHHHHhcCCChhhHH-HHHH-HHHhccCCcchhhhhhchhhHHHHHH
Q 015413 178 LMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKS-IVLY-AIAMADYDQEVSEYVLKTRDGINRLA 255 (407)
Q Consensus 178 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~s~~~~l~~~~ 255 (407)
+. ...+...... . . .....+.|+.+|+++. +.+...+ ++.. ..+. +..++ .++|+...+..+.
T Consensus 130 ~~--~~~~~~~~~~-~-----~--~~~~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~--~~~~~--~~~s~~~~~~~~~ 194 (504)
T 1sez_A 130 ML--LEPILWKNKK-L-----S--QVSDSHESVSGFFQRH-FGKEVVDYLIDPFVAGT--CGGDP--DSLSMHHSFPELW 194 (504)
T ss_dssp HH--THHHHC------------------CCCBHHHHHHHH-HCHHHHHTTHHHHHHHH--HSCCG--GGSBHHHHCHHHH
T ss_pred Hh--HhhhccCccc-c-----c--ccCCCCccHHHHHHHH-cCHHHHHHHHHHHHccc--cCCCh--HHhhHHHHhHHHH
Confidence 21 1111110000 0 0 0113458999999865 3333333 3321 1122 22232 2356544332222
Q ss_pred HHHHh------------hccccC-------------CCcceEeecCCcchHHHHHHHHHHhcC-cEEEeCCceeEEEEec
Q 015413 256 LYNSS------------IGRFQN-------------ALGALIYPIYGQGELPQAFCRRAAVKG-CLYVLRMPVISLLTDQ 309 (407)
Q Consensus 256 ~~~~s------------~~~~~~-------------~~~~~~~p~gG~~~l~~al~r~~~~~G-g~i~l~~~V~~I~~~~ 309 (407)
.+... +...+. ....+++++||+++|+++|++ ..| ++|++|++|++|..+
T Consensus 195 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~l~~~l~~---~l~~~~i~~~~~V~~I~~~- 270 (504)
T 1sez_A 195 NLEKRFGSVILGAIRSKLSPKNEKKQGPPKTSANKKRQRGSFSFLGGMQTLTDAICK---DLREDELRLNSRVLELSCS- 270 (504)
T ss_dssp HHHHHTSCHHHHHHHHTTC----------CCCSCCSTTCSCBEETTCTHHHHHHHHT---TSCTTTEETTCCEEEEEEE-
T ss_pred HHHHHhCCHHHHHHHhhhcccccccccccchhhccccCCceEeeCcHHHHHHHHHHh---hcccceEEcCCeEEEEEec-
Confidence 11110 000000 001267899999999998875 456 799999999999987
Q ss_pred CCCc-----EEEEEeC--CC---cEEEcCEEEE-CCCCCCCCCCcc-chhhhhhhhhhhcccCCCceEEEEEEEeCCCCC
Q 015413 310 NSGS-----YKGVRLA--SG---QDILSHKLVL-DPSFTVPGSLAS-SHQQLQESFQAFSLSDNKGKVARGICITRSSLK 377 (407)
Q Consensus 310 ~~g~-----~~gV~~~--~G---~~i~Ad~VI~-~p~~~~~~~~~~-~~p~lp~~~~~~~~~~~~g~~~k~i~i~~~p~~ 377 (407)
+++ .+.|++. +| ++++||+||+ .|...+.++... ..+++++.. .+...++.+.++++.|++++|
T Consensus 271 -~~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~~l~~ll~~~~~~~~~~~~---l~~~~~~~~~~v~l~~~~~~~ 346 (504)
T 1sez_A 271 -CTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVKSMKIAKRGNPFLLNF---IPEVDYVPLSVVITTFKRENV 346 (504)
T ss_dssp -CSSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHHHTSEEESSSSBCCCTT---SCCCCEEEEEEEEEEEEGGGB
T ss_pred -CCCCcccceEEEEEcCCCCccceeEECCEEEECCCHHHHHHHhhcccCCcccHHH---HhcCCCCceEEEEEEEchhhc
Confidence 333 2456554 45 5789999996 465555565320 112344322 344567889999999999987
Q ss_pred C
Q 015413 378 P 378 (407)
Q Consensus 378 ~ 378 (407)
+
T Consensus 347 ~ 347 (504)
T 1sez_A 347 K 347 (504)
T ss_dssp S
T ss_pred C
Confidence 4
No 15
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.93 E-value=9.4e-25 Score=215.77 Aligned_cols=274 Identities=12% Similarity=0.076 Sum_probs=173.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccccchhhhhhhhccCCCCCCCCCCCcccccccccccccccc
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLLS 102 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (407)
.||||||||++||+||+.|+++|++|+||||++++||++.++..+|
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~g---------------------------------- 46 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTNLPYKG---------------------------------- 46 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSEEEETT----------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEEeccCC----------------------------------
Confidence 3899999999999999999999999999999999999999976543
Q ss_pred CCCCceEEecCCCeEEee---CcHHHHHHHhcCcccccccccccceeeEccCCceeecCCCHHHHhhhccCChHHHHHHH
Q 015413 103 QHPRNFNLDVSGPRVLFC---ADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLM 179 (407)
Q Consensus 103 ~~~~~~~idl~Gp~~~~~---~~~~~~~l~~~g~~~~~~f~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~l~~~~k~~l~ 179 (407)
|.+|. ||+++.. ...+.+++.+.|... ++...+....+..+|+.+++|... ..+++.++..+.
T Consensus 47 -----~~~d~-G~~~~~~~~~~~~~~~l~~~lg~~~--~~~~~~~~~~~~~~g~~~~~~~~~------~~l~~~~~~~~~ 112 (421)
T 3nrn_A 47 -----FQLST-GALHMIPHGEDGPLAHLLRILGAKV--EIVNSNPKGKILWEGKIFHYRESW------KFLSVKEKAKAL 112 (421)
T ss_dssp -----EEEES-SSCSEETTTTSSHHHHHHHHHTCCC--CEEECSSSCEEEETTEEEEGGGGG------GGCC--------
T ss_pred -----EEEec-CCeEEEccCCChHHHHHHHHhCCcc--eEEECCCCeEEEECCEEEEcCCch------hhCCHhHHHHHH
Confidence 34566 4654432 236777788877642 333333222111267777776421 235556666665
Q ss_pred HHHHHHHhhcCCCccccccccccccccCCcHHHHHHhcCCC-hhhHHHHHHH-HHhccCCcchhhhhhchhhHHHHHHHH
Q 015413 180 RFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLP-HKIKSIVLYA-IAMADYDQEVSEYVLKTRDGINRLALY 257 (407)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~l~~~~~~ 257 (407)
+++....... ....+.++.+|+++++++ +.++.++... .... ..++ .++++...+..+..+
T Consensus 113 ~~~~~~~~~~-------------~~~~~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~ 175 (421)
T 3nrn_A 113 KLLAEIRMNK-------------LPKEEIPADEWIKEKIGENEFLLSVLESFAGWAD--SVSL--SDLTALELAKEIRAA 175 (421)
T ss_dssp CCHHHHHTTC-------------CCCCCSBHHHHHHHHTCCCHHHHHHHHHHHHHHH--SSCG--GGSBHHHHHHHHHHH
T ss_pred HHHHHHHhcc-------------CCCCCCCHHHHHHHhcCCcHHHHHHHHHHHHHhc--CCCc--ccCCHHHHHHHHHHH
Confidence 5544333210 012347899999987444 4444443321 1111 1222 235655444444332
Q ss_pred HHhhccccCCCcceEeecCCcchHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE-CCCC
Q 015413 258 NSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL-DPSF 336 (407)
Q Consensus 258 ~~s~~~~~~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~-~p~~ 336 (407)
. .++ ..++|+||+++|+++|++.+++.|++|+++++|++|..+ ++++ |. ++|++++||+||+ .|..
T Consensus 176 ~----~~~----g~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~--~~~v--V~-~~g~~~~ad~Vv~a~~~~ 242 (421)
T 3nrn_A 176 L----RWG----GPGLIRGGCKAVIDELERIIMENKGKILTRKEVVEINIE--EKKV--YT-RDNEEYSFDVAISNVGVR 242 (421)
T ss_dssp H----HHC----SCEEETTCHHHHHHHHHHHHHTTTCEEESSCCEEEEETT--TTEE--EE-TTCCEEECSEEEECSCHH
T ss_pred h----hcC----CcceecCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEE--CCEE--EE-eCCcEEEeCEEEECCCHH
Confidence 1 122 157899999999999999999999999999999999875 6664 64 6888999999995 3444
Q ss_pred CCCCCCccchhhhhhhhhhhcccCCCceEEEEEEEeCCCC
Q 015413 337 TVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSL 376 (407)
Q Consensus 337 ~~~~~~~~~~p~lp~~~~~~~~~~~~g~~~k~i~i~~~p~ 376 (407)
.+.++. . .+++|+......++..+..+.++.+.++++.
T Consensus 243 ~~~~ll-~-~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~ 280 (421)
T 3nrn_A 243 ETVKLI-G-RDYFDRDYLKQVDSIEPSEGIKFNLAVPGEP 280 (421)
T ss_dssp HHHHHH-C-GGGSCHHHHHHHHTCCCCCEEEEEEEEESSC
T ss_pred HHHHhc-C-cccCCHHHHHHHhCCCCCceEEEEEEEcCCc
Confidence 434432 1 2346654433334455668889999999984
No 16
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.93 E-value=2.2e-25 Score=226.11 Aligned_cols=288 Identities=15% Similarity=0.134 Sum_probs=166.4
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCC-CeEEEEccCCCCCCcccccchhhhhhhhccCCCCCCCCCCCcccccccccccc
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASG-KSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYAS 98 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G-~~VlvlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (407)
|..+||||||||++||+||+.|+++| ++|+|||+++++||+++|++..
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t~~~~------------------------------- 54 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTVTGY------------------------------- 54 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCEEECG-------------------------------
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceeeeecC-------------------------------
Confidence 55689999999999999999999999 9999999999999999997541
Q ss_pred ccccCCCCceEEecCCCeEEeeC--cHHHHHHHhcCcccccccccccceeeEccCCceeecCCCHHHHhhhccCChH-HH
Q 015413 99 RLLSQHPRNFNLDVSGPRVLFCA--DHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLM-EK 175 (407)
Q Consensus 99 ~~~~~~~~~~~idl~Gp~~~~~~--~~~~~~l~~~g~~~~~~f~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~l~~~-~k 175 (407)
..+.+|+ |++++... ..+.+++.+.++.... ..+.+. +|..+.++.+...+......... ..
T Consensus 55 -------~G~~~D~-G~~~~~~~~~~~~~~~~~~lg~~~~~------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (516)
T 1rsg_A 55 -------QGRKYDI-GASWHHDTLTNPLFLEEAQLSLNDGR------TRFVFD-DDNFIYIDEERGRVDHDKELLLEIVD 119 (516)
T ss_dssp -------GGCEEES-SCCEECCTTTCHHHHHHHHHHHHHCC------CCEECC-CCCCEEEETTTEECTTCTTTCHHHHH
T ss_pred -------CCcEEec-CCeEEecCCCChHHHHHHHhCCCCcc------eeEEEC-CCCEEEEcCCCccccccHHHHHHHHH
Confidence 1234777 58887543 3566666555542110 011111 23322222211000000000000 01
Q ss_pred HHHHHHHHHHHhhcCCCccccccccccccccCCcHHHHHHhc------CCChhhHHHHHHHHHhc-c-CCcchhhhhhch
Q 015413 176 NQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKM------KLPHKIKSIVLYAIAMA-D-YDQEVSEYVLKT 247 (407)
Q Consensus 176 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~------~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~s~ 247 (407)
..+.++... .... .....+.++.+|+.++ .+++....++...+... . +..+. ..+|+
T Consensus 120 ~~~~~~~~~---~~~~----------~~~~~d~s~~~~l~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~--~~~s~ 184 (516)
T 1rsg_A 120 NEMSKFAEL---EFHQ----------HLGVSDCSFFQLVMKYLLQRRQFLTNDQIRYLPQLCRYLELWHGLDW--KLLSA 184 (516)
T ss_dssp HHHHHHHHH---HC-----------------CCBHHHHHHHHHHHHGGGSCHHHHHHHHHHHGGGHHHHTBCT--TTSBH
T ss_pred HHHHHHHHH---Hhhh----------ccCCCCCCHHHHHHHHHHHhhcccCHHHHHHHHHHHHHHHHHhCCCh--HHCCh
Confidence 112222211 1100 0113457888877542 22322222211111000 0 00111 11332
Q ss_pred hhHHHHHHHHHHhhccccCCCcceEeecCCcchHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEc
Q 015413 248 RDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILS 327 (407)
Q Consensus 248 ~~~l~~~~~~~~s~~~~~~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A 327 (407)
.. .+ .... +...+++| +++|+++|++.+ .+++|++|++|++|..+ ++..+.|++.+|++++|
T Consensus 185 ~~-------~~---~~~~---~~~~~~~g-~~~l~~~l~~~l--~~~~i~~~~~V~~I~~~--~~~~v~v~~~~g~~~~a 246 (516)
T 1rsg_A 185 KD-------TY---FGHQ---GRNAFALN-YDSVVQRIAQSF--PQNWLKLSCEVKSITRE--PSKNVTVNCEDGTVYNA 246 (516)
T ss_dssp HH-------HC---CCCS---SCCEEESC-HHHHHHHHHTTS--CGGGEETTCCEEEEEEC--TTSCEEEEETTSCEEEE
T ss_pred HH-------HH---hhcc---CcchhhhC-HHHHHHHHHHhC--CCCEEEECCEEEEEEEc--CCCeEEEEECCCcEEEC
Confidence 11 10 0111 12346777 999998887543 23689999999999985 23336888889989999
Q ss_pred CEEEE-CCCCCCCCC---------CccchhhhhhhhhhhcccCCCceEEEEEEEeCCCCCCCCCcEEEE
Q 015413 328 HKLVL-DPSFTVPGS---------LASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPDLSNFLVI 386 (407)
Q Consensus 328 d~VI~-~p~~~~~~~---------~~~~~p~lp~~~~~~~~~~~~g~~~k~i~i~~~p~~~~~~~~~~~ 386 (407)
|+||+ .|...+... .+.|.|+||+.+.+..++..+|.+.|+++.|++|||++.......
T Consensus 247 d~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~Lp~~~~~ai~~~~~~~~~Kv~l~f~~~fW~~~~~~~~~ 315 (516)
T 1rsg_A 247 DYVIITVPQSVLNLSVQPEKNLRGRIEFQPPLKPVIQDAFDKIHFGALGKVIFEFEECCWSNESSKIVT 315 (516)
T ss_dssp EEEEECCCHHHHHGGGSSCSCSTTCCEEESCCCHHHHHHTTSSCCCCCEEEEEEESSCCSCCSCSEEEE
T ss_pred CEEEECCCHHHhhhccccccccccceEecCCCCHHHHHHHHhCCCCcceEEEEEeCCCCCCCCCCcEEE
Confidence 99996 455544321 256899999998888889999999999999999999765443333
No 17
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.92 E-value=1.7e-24 Score=219.09 Aligned_cols=294 Identities=15% Similarity=0.115 Sum_probs=168.0
Q ss_pred cccEEEECCChhHHHHHHHHhh-CCCeEEEEccCCCCCCcccccchhhhhhhhccCCCCCCCCCCCcccccccccccccc
Q 015413 22 AFDLIVIGTGLPESVISAAASA-SGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRL 100 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~-~G~~VlvlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (407)
.+||||||||++||+||++|++ .|++|+||||++++||+++|+...
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~T~~~~--------------------------------- 56 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTP--------------------------------- 56 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGCEEECT---------------------------------
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCeeeEEec---------------------------------
Confidence 5899999999999999999998 499999999999999999985321
Q ss_pred ccCCCCceEEecCCCeEEeeCc-HHHHHHHhcCcccccccccccc-eeeEccCCceeecCCCHHHHhhhccCChHHHHHH
Q 015413 101 LSQHPRNFNLDVSGPRVLFCAD-HAVDLMLKSGASHYLEFKSIDA-TFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQL 178 (407)
Q Consensus 101 ~~~~~~~~~idl~Gp~~~~~~~-~~~~~l~~~g~~~~~~f~~~~~-~~~~~~~g~~~~~p~~~~~~~~~~~l~~~~k~~l 178 (407)
..|.+|. ||++++... .+.+++.+.+... .+|...+. .+++. +|+.+++|... .+ ..+........
T Consensus 57 -----~G~~~D~-G~h~~~~~~~~v~~l~~e~~~~~-~~~~~~~~~~~i~~-~g~~~~~p~~~--~~--~~~~~~~~~~~ 124 (513)
T 4gde_A 57 -----EGFLYDV-GGHVIFSHYKYFDDCLDEALPKE-DDWYTHQRISYVRC-QGQWVPYPFQN--NI--SMLPKEEQVKC 124 (513)
T ss_dssp -----TSCEEES-SCCCCCCCBHHHHHHHHHHSCSG-GGEEEEECCEEEEE-TTEEEESSGGG--GG--GGSCHHHHHHH
T ss_pred -----CCEEEEe-CceEecCCCHHHHHHHHHhCCcc-ceeEEecCceEEEE-CCeEeecchhh--hh--hhcchhhHHHH
Confidence 2355777 588876655 6777777765432 23333222 23443 78888887531 11 12333232222
Q ss_pred H-HHHHHHHhhcCCCccccccccccccccCCcHHHHHHhcCCChhhHHHHH--HHHHhccCCcchhhhhhchhhHHH---
Q 015413 179 M-RFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVL--YAIAMADYDQEVSEYVLKTRDGIN--- 252 (407)
Q Consensus 179 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~s~~~~l~--- 252 (407)
. .++....... .......++.+|+.+. +.+.+.+.+. +..... ..++ .++++.+...
T Consensus 125 ~~~~~~~~~~~~------------~~~~~~~s~~~~~~~~-~g~~l~~~~~~~~~~~~~--~~~~--~~ls~~~~~~~~~ 187 (513)
T 4gde_A 125 IDGMIDAALEAR------------VANTKPKTFDEWIVRM-MGTGIADLFMRPYNFKVW--AVPT--TKMQCAWLGERVA 187 (513)
T ss_dssp HHHHHHHHHHHH------------TCCSCCCSHHHHHHHH-HHHHHHHHTHHHHHHHHH--SSCG--GGBCSGGGCSSCC
T ss_pred HHHHHHHHHhhh------------cccccccCHHHHHHHh-hhhhhhhhhcchhhhhhc--cCCh--HHhhHHHHHHhhc
Confidence 2 2222111110 1122346788887642 2222222211 111111 1111 1233322111
Q ss_pred ------HHHHHHHh--hccccCCCcceEe-ecCCcchHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCc
Q 015413 253 ------RLALYNSS--IGRFQNALGALIY-PIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ 323 (407)
Q Consensus 253 ------~~~~~~~s--~~~~~~~~~~~~~-p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~ 323 (407)
.+...... ...++.. ..+.+ ++||+++|+++|++.+...|++|++|++|++|..+ ++ .|++.+|+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~--~~---~v~~~~G~ 261 (513)
T 4gde_A 188 APNLKAVTTNVILGKTAGNWGPN-ATFRFPARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNAN--NK---TVTLQDGT 261 (513)
T ss_dssp CCCHHHHHHHHHHTCCCCSCBTT-BEEEEESSSHHHHHHHHHHHTSCGGGEEESGGGCEEEEETT--TT---EEEETTSC
T ss_pred ccchhhhhhhhhhcccccccccc-cceeecccCCHHHHHHHHHHHHHhcCeeeecceEEEEEEcc--CC---EEEEcCCC
Confidence 11111110 0111111 12334 58999999999999998999999999999999875 44 35578999
Q ss_pred EEEcCEEEEC-CCCCCCCCCccchhhhhhhhhhhcccCCCceEEEEEEEeCCCCCCC-CCcEEEEeCC
Q 015413 324 DILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPD-LSNFLVIFPP 389 (407)
Q Consensus 324 ~i~Ad~VI~~-p~~~~~~~~~~~~p~lp~~~~~~~~~~~~g~~~k~i~i~~~p~~~~-~~~~~~~~p~ 389 (407)
++.||+||++ |...+.++.. .++ ........++..+..+.+.++.+.... .....+.+|.
T Consensus 262 ~~~ad~vI~t~P~~~l~~~l~--~~~----~~~~~~~l~y~~~~~v~l~~~~~~~~~~~~~~~~y~~~ 323 (513)
T 4gde_A 262 TIGYKKLVSTMAVDFLAEAMN--DQE----LVGLTKQLFYSSTHVIGVGVRGSRPERIGDKCWLYFPE 323 (513)
T ss_dssp EEEEEEEEECSCHHHHHHHTT--CHH----HHHHHTTCCEEEEEEEEEEEESSCCTTTTTCCEEECCS
T ss_pred EEECCEEEECCCHHHHHHhcC--chh----hHhhhhcccCCceEEEEEEEeccccccccccceeeccC
Confidence 9999999964 6554444321 122 222334456777777778887764422 2333444443
No 18
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.91 E-value=9.5e-24 Score=213.07 Aligned_cols=286 Identities=12% Similarity=0.088 Sum_probs=171.1
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccccchhhhhhhhccCCCCCCCCCCCcccccccccccccc
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRL 100 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (407)
..+||||||||++||+||..|+++|++|+|||+++++||++.++....
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~~-------------------------------- 79 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEE-------------------------------- 79 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETT--------------------------------
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccCC--------------------------------
Confidence 357999999999999999999999999999999999999998865211
Q ss_pred ccCCCCceEEecCCCeEEeeC-cHHHHHHHhcCccccccccccc-ceeeEccCCceeecCC---CHHHHhhhccCCh---
Q 015413 101 LSQHPRNFNLDVSGPRVLFCA-DHAVDLMLKSGASHYLEFKSID-ATFMLDADAKLCSVPD---SRAAIFKDKSLGL--- 172 (407)
Q Consensus 101 ~~~~~~~~~idl~Gp~~~~~~-~~~~~~l~~~g~~~~~~f~~~~-~~~~~~~~g~~~~~p~---~~~~~~~~~~l~~--- 172 (407)
..+.+|+ |++++... ..+.+++.+.|+... .+...+ ..+... +|.....+. .. ..+.. .+.+
T Consensus 80 -----~~~~~~~-g~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~-~g~~~~~~~~~~~~-~~~~~-~~~~~~~ 149 (498)
T 2iid_A 80 -----AGWYANL-GPMRLPEKHRIVREYIRKFDLRLN-EFSQENDNAWYFI-KNIRKKVGEVKKDP-GLLKY-PVKPSEA 149 (498)
T ss_dssp -----TTEEEES-SCCCEETTCHHHHHHHHHTTCCEE-EECSCCTTSEEEE-TTEEEEHHHHHHCG-GGGCC-CCCGGGT
T ss_pred -----CCchhhc-CcccccchHHHHHHHHHHhCCCce-eecccCCccEEEe-CCeeecccccccCc-ccccc-CCCcccc
Confidence 1233566 46665443 356677888886432 222111 122221 343221110 00 00100 0111
Q ss_pred ----HHH--HHHHHHHHHHHhhcCCCccccccccccccccCCcHHHHHHhcC-CChhhHHHHHHHHHhc-cCCcchhhhh
Q 015413 173 ----MEK--NQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMK-LPHKIKSIVLYAIAMA-DYDQEVSEYV 244 (407)
Q Consensus 173 ----~~k--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~ 244 (407)
.+. ..+.++...+.... .......+.+.++.+|+.+.+ +++..+..+...+... .+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------- 214 (498)
T 2iid_A 150 GKSAGQLYEESLGKVVEELKRTN--------CSYILNKYDTYSTKEYLIKEGDLSPGAVDMIGDLLNEDSGYY------- 214 (498)
T ss_dssp TCCHHHHHHHHTHHHHHHHHHSC--------HHHHHHHHTTSBHHHHHHHTSCCCHHHHHHHHHHTTCGGGTT-------
T ss_pred CCCHHHHHHHHHHHHHHHHhhcc--------HHHHHHHhhhhhHHHHHHHccCCCHHHHHHHHHhcCcccchh-------
Confidence 110 01112222111110 000012345688999999865 5666555443221100 000
Q ss_pred hchhhHHHHHHHHHHhhccccCCCcceEeecCCcchHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCc-
Q 015413 245 LKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ- 323 (407)
Q Consensus 245 ~s~~~~l~~~~~~~~s~~~~~~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~- 323 (407)
.+....+... ..+. .. ..++++.||+++|+++|++.+ +.+|++|++|++|..+ +++ +.|++.+|+
T Consensus 215 ~~~~~~~~~~----~~~~-~~---~~~~~~~gG~~~l~~~l~~~l---~~~i~~~~~V~~I~~~--~~~-v~v~~~~~~~ 280 (498)
T 2iid_A 215 VSFIESLKHD----DIFA-YE---KRFDEIVDGMDKLPTAMYRDI---QDKVHFNAQVIKIQQN--DQK-VTVVYETLSK 280 (498)
T ss_dssp SBHHHHHHHH----HHHT-TC---CCEEEETTCTTHHHHHHHHHT---GGGEESSCEEEEEEEC--SSC-EEEEEECSSS
T ss_pred HHHHHHHHHH----hccc-cC---cceEEeCCcHHHHHHHHHHhc---ccccccCCEEEEEEEC--CCe-EEEEEecCCc
Confidence 1111111111 1111 11 237789999999999998654 3489999999999986 444 467766664
Q ss_pred ---EEEcCEEEE-CCCCCCCCCCccchhhhhhhhhhhcccCCCceEEEEEEEeCCCCCCC
Q 015413 324 ---DILSHKLVL-DPSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPD 379 (407)
Q Consensus 324 ---~i~Ad~VI~-~p~~~~~~~~~~~~p~lp~~~~~~~~~~~~g~~~k~i~i~~~p~~~~ 379 (407)
+++||+||+ .|...+.++ .|+|+||+.+.+..++..++.+.|+++.|++|||++
T Consensus 281 ~~~~~~ad~vI~t~p~~~~~~i--~f~p~Lp~~~~~ai~~l~~~~~~kv~l~~~~~~w~~ 338 (498)
T 2iid_A 281 ETPSVTADYVIVCTTSRAVRLI--KFNPPLLPKKAHALRSVHYRSGTKIFLTCTTKFWED 338 (498)
T ss_dssp CCCEEEESEEEECSCHHHHTTS--EEESCCCHHHHHHHHHCCEECEEEEEEEESSCGGGG
T ss_pred ccceEEeCEEEECCChHHHhhe--ecCCCCCHHHHHHHHhCCCcceeEEEEEeCCCCccC
Confidence 489999996 465555663 478999998888778888999999999999999854
No 19
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.91 E-value=3.5e-23 Score=207.60 Aligned_cols=296 Identities=11% Similarity=0.103 Sum_probs=173.9
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCC-eEEEEccCCCCCCcccccchhhhhhhhccCCCCCCCCCCCccccccccccccc
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~-~VlvlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (407)
..+||+|||||++||++|..|+++|+ +|+|+|+++++||++.+....+
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~~~~~------------------------------- 51 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTNFAG------------------------------- 51 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEEEETT-------------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeecccCC-------------------------------
Confidence 45899999999999999999999999 8999999999999999875432
Q ss_pred cccCCCCceEEecCCCeEEee-----CcHHHHHHHh-cCcccccc-cccccceeeEccCCceeecCCCHHHHhhhccCCh
Q 015413 100 LLSQHPRNFNLDVSGPRVLFC-----ADHAVDLMLK-SGASHYLE-FKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGL 172 (407)
Q Consensus 100 ~~~~~~~~~~idl~Gp~~~~~-----~~~~~~~l~~-~g~~~~~~-f~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~l~~ 172 (407)
+.+|+ |++++.. ...+.+++.+ +|+..+.. +... ..+++..+|+.++.+.. ...+.
T Consensus 52 --------~~~d~-g~~~~~~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~-~~~~~~~~g~~~~~~~~-~~~~~------ 114 (472)
T 1b37_A 52 --------INVEL-GANWVEGVNGGKMNPIWPIVNSTLKLRNFRSDFDYL-AQNVYKEDGGVYDEDYV-QKRIE------ 114 (472)
T ss_dssp --------EEEES-SCCEEEEESSSSCCTHHHHHHTTSCCCEEECCCTTG-GGCEECSSSSBCCHHHH-HHHHH------
T ss_pred --------cEEee-CCeEEeccCCCCCCHHHHHHHhhcCCceeeccCccc-cceeEcCCCCCCCHHHH-HHHHH------
Confidence 34677 5787752 2367888888 78765432 2111 12233335554432110 01110
Q ss_pred HHHHHHHHHHHHHHhhcCCCccccccccccccccCCcHHH--HHHhcCC--C-hhhHHHHHHHH-HhccCCcchhhhhhc
Q 015413 173 MEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAE--FLTKMKL--P-HKIKSIVLYAI-AMADYDQEVSEYVLK 246 (407)
Q Consensus 173 ~~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~--~l~~~~~--~-~~~~~~~~~~~-~~~~~~~~~~~~~~s 246 (407)
....+.++.+.+..... ...+.+.++.+ ++.+... . .....++.... .+. +..++ ..+|
T Consensus 115 -~~~~~~~~~~~~~~~~~-----------~~~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~s 179 (472)
T 1b37_A 115 -LADSVEEMGEKLSATLH-----------ASGRDDMSILAMQRLNEHQPNGPATPVDMVVDYYKFDYE-FAEPP--RVTS 179 (472)
T ss_dssp -HHHHHHHHHHHHHHTSC-----------TTCTTCCBHHHHHHHHHTSSSSCCSHHHHHHHHHHTHHH-HSSCG--GGBB
T ss_pred -HHHHHHHHHHHHHHhhc-----------cccchhhhHHHHHHHhhhcccccccHHHHHHHHHHHhhh-hcccc--cccc
Confidence 00112222222211110 01123445443 5543321 1 11222221111 000 01111 1122
Q ss_pred hhhHHHHHHHHHHhhccccCCCcceEeecCCcchHHHHHHHHHHhc--------CcEEEeCCceeEEEEecCCCcEEEEE
Q 015413 247 TRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVK--------GCLYVLRMPVISLLTDQNSGSYKGVR 318 (407)
Q Consensus 247 ~~~~l~~~~~~~~s~~~~~~~~~~~~~p~gG~~~l~~al~r~~~~~--------Gg~i~l~~~V~~I~~~~~~g~~~gV~ 318 (407)
....+. ...|. .++. ...+..++||++.|+++|++.+... |++|+++++|++|..+ ++++ .|+
T Consensus 180 ~~~~~~-~~~~~----~~~~-~~~~~~~~gG~~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~--~~~v-~v~ 250 (472)
T 1b37_A 180 LQNTVP-LATFS----DFGD-DVYFVADQRGYEAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYS--PGGV-TVK 250 (472)
T ss_dssp STTTSS-CHHHH----HHCS-EEEEECCTTCTTHHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEEC--SSCE-EEE
T ss_pred hhhccc-ccccc----ccCC-ceeeeecCCcHHHHHHHHHHhccccccccccccccEEEcCCEEEEEEEc--CCcE-EEE
Confidence 211110 00111 1111 0113345899999999998765543 7899999999999986 5554 588
Q ss_pred eCCCcEEEcCEEEE-CCCCCCCCCCccchhhhhhhhhhhcccCCCceEEEEEEEeCCCCCCCC-CcEEEEeC
Q 015413 319 LASGQDILSHKLVL-DPSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPDL-SNFLVIFP 388 (407)
Q Consensus 319 ~~~G~~i~Ad~VI~-~p~~~~~~~~~~~~p~lp~~~~~~~~~~~~g~~~k~i~i~~~p~~~~~-~~~~~~~p 388 (407)
+.+|++++||+||+ .|...+.++.+.|.|+||+.+.+..++..++.+.|+++.|++|||+.. +...++++
T Consensus 251 ~~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~~~~~~~~~~~ 322 (472)
T 1b37_A 251 TEDNSVYSADYVMVSASLGVLQSDLIQFKPKLPTWKVRAIYQFDMAVYTKIFLKFPRKFWPEGKGREFFLYA 322 (472)
T ss_dssp ETTSCEEEESEEEECSCHHHHHTTSSEEESCCCHHHHHHHHHSEEECEEEEEEECSSCCSCCSTTCSEEEEC
T ss_pred ECCCCEEEcCEEEEecCHHHhccCCeeECCCCCHHHHHHHHhcCCcceeEEEEECCCcCCCCCCCcceEEec
Confidence 88999999999995 465555555556889999987776677789999999999999999752 33344443
No 20
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.90 E-value=1.5e-22 Score=200.38 Aligned_cols=287 Identities=14% Similarity=0.085 Sum_probs=174.2
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccccchhhhhhhhccCCCCCCCCCCCccccccccccccccc
Q 015413 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLL 101 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (407)
++||||||||++||+||+.|+++|++|+|||+++++||++.+.+...
T Consensus 1 ~~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~t~~~~c--------------------------------- 47 (431)
T 3k7m_X 1 MYDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYSRESRN--------------------------------- 47 (431)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEEECSS---------------------------------
T ss_pred CCCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeecceeccC---------------------------------
Confidence 38999999999999999999999999999999999999998865421
Q ss_pred cCCCCceEEecCCCeEEee--CcHHHHHHHhcCcccccccccccceeeE-ccCCceeec-CCCHHHHhhhccCChHHHHH
Q 015413 102 SQHPRNFNLDVSGPRVLFC--ADHAVDLMLKSGASHYLEFKSIDATFML-DADAKLCSV-PDSRAAIFKDKSLGLMEKNQ 177 (407)
Q Consensus 102 ~~~~~~~~idl~Gp~~~~~--~~~~~~~l~~~g~~~~~~f~~~~~~~~~-~~~g~~~~~-p~~~~~~~~~~~l~~~~k~~ 177 (407)
...+.+|+ |++++.. ...+.+++.+.|+......... ...+ ..++..... |... +... .-+..
T Consensus 48 ---ipg~~~~~-g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~------~~~~~ 114 (431)
T 3k7m_X 48 ---VPGLRVEI-GGAYLHRKHHPRLAAELDRYGIPTAAASEFT--SFRHRLGPTAVDQAFPIPG-SEAV------AVEAA 114 (431)
T ss_dssp ---STTCEEES-SCCCBCTTTCHHHHHHHHHHTCCEEECCCCC--EECCBSCTTCCSSSSCCCG-GGHH------HHHHH
T ss_pred ---CCCceEec-CCeeeCCCCcHHHHHHHHHhCCeeeecCCCC--cEEEEecCCeecCCCCCCH-HHHH------HHHHH
Confidence 01223555 4665543 3466677777776533221111 1111 112222211 1110 1100 01222
Q ss_pred HHHHHHHHHhhcCCCccccccccccccccCCcHHHHHHhcCCChhhHHHHHHHHHhccCCcchhhhhhchhhHHHHHHHH
Q 015413 178 LMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALY 257 (407)
Q Consensus 178 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~ 257 (407)
+.+++..........+... ....+.. .++.+|+++.+.++..+.++...+... +..+. .+++....+. +
T Consensus 115 ~~~l~~~~~~~~~~~~~~~---~~~~~~d-~s~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~s~~~~~~----~ 183 (431)
T 3k7m_X 115 TYTLLRDAHRIDLEKGLEN---QDLEDLD-IPLNEYVDKLDLPPVSRQFLLAWAWNM-LGQPA--DQASALWMLQ----L 183 (431)
T ss_dssp HHHHHHHHTTCCTTTCTTS---SSCGGGC-SBHHHHHHHHTCCHHHHHHHHHHHHHH-HSSCT--TTSBHHHHHH----H
T ss_pred HHHHHHHHHhcCCCCCccC---cchhhhc-CCHHHHHHhcCCCHHHHHHHHHHHHHh-cCCCh--hhhhHHHHHH----H
Confidence 3333333333221111100 0112233 899999998888887776543221111 11121 1245443332 2
Q ss_pred HHhhc-c----ccCCCcceEeecCCcchHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 015413 258 NSSIG-R----FQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (407)
Q Consensus 258 ~~s~~-~----~~~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (407)
+...+ . +.. ... ++.+|++.+.++++ +..| +|++|++|++|..+ ++. +.|++.+|++++||+||+
T Consensus 184 ~~~~~~~~~~~~~~--~~~-~~~~g~~~l~~~~~---~~~g-~i~~~~~V~~i~~~--~~~-v~v~~~~g~~~~ad~vi~ 253 (431)
T 3k7m_X 184 VAAHHYSILGVVLS--LDE-VFSNGSADLVDAMS---QEIP-EIRLQTVVTGIDQS--GDV-VNVTVKDGHAFQAHSVIV 253 (431)
T ss_dssp HHHTTSCHHHHHHT--CCE-EETTCTHHHHHHHH---TTCS-CEESSCCEEEEECS--SSS-EEEEETTSCCEEEEEEEE
T ss_pred HHhcCCccceeecc--hhh-hcCCcHHHHHHHHH---hhCC-ceEeCCEEEEEEEc--CCe-EEEEECCCCEEEeCEEEE
Confidence 22111 0 000 113 78999999988765 4566 99999999999876 444 468888898899999995
Q ss_pred -CCCCCCCCCCccchhhhhhhhhhhcccCCCceEEEEEEEeCCCCC
Q 015413 333 -DPSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLK 377 (407)
Q Consensus 333 -~p~~~~~~~~~~~~p~lp~~~~~~~~~~~~g~~~k~i~i~~~p~~ 377 (407)
.|..++..+ .|.|+||..+.+..+...++..+|+.+.|+++|+
T Consensus 254 a~~~~~l~~i--~~~p~l~~~~~~~~~~~~~~~~~kv~~~~~~~~~ 297 (431)
T 3k7m_X 254 ATPMNTWRRI--VFTPALPERRRSVIEEGHGGQGLKILIHVRGAEA 297 (431)
T ss_dssp CSCGGGGGGS--EEESCCCHHHHHHHHHCCCCCEEEEEEEEESCCT
T ss_pred ecCcchHhhe--eeCCCCCHHHHHHHHhCCCcceEEEEEEECCCCc
Confidence 566666664 4789999987777677779999999999999986
No 21
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.88 E-value=5.2e-22 Score=199.49 Aligned_cols=281 Identities=13% Similarity=0.109 Sum_probs=167.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCC-CeEEEEccCCCCCCccccc-chhhhhhhhccCCCCCCCCCCCcccccccccccc
Q 015413 21 TAFDLIVIGTGLPESVISAAASASG-KSVLHLDPNPFYGSHFSSL-SIADLTHFLNSHSTPSSVCPDPLYSDVEISNYAS 98 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G-~~VlvlE~~~~~GG~~~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (407)
..+||+|||||++||+||+.|+++| ++|+|+|+++++||++++. ..+
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~~------------------------------- 56 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDEN------------------------------- 56 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECTT-------------------------------
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecCC-------------------------------
Confidence 4689999999999999999999999 8999999999999999985 332
Q ss_pred ccccCCCCceEEecCCCeEEeeCc-HHHHHHHhcCcccccccccccceeeEccCCceeecCCCHHHHhhhccCChHHHHH
Q 015413 99 RLLSQHPRNFNLDVSGPRVLFCAD-HAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQ 177 (407)
Q Consensus 99 ~~~~~~~~~~~idl~Gp~~~~~~~-~~~~~l~~~g~~~~~~f~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~l~~~~k~~ 177 (407)
.+.+|. |+++++... .+.+++.+.. .++..... ..+++. +|+++.+|... .+ ..++..++..
T Consensus 57 --------g~~~~~-g~~~~~~~~~~~~~l~~~~~-~~~~~~~~--~~~~~~-~g~~~~~P~~~--~~--~~l~~~~~~~ 119 (484)
T 4dsg_A 57 --------GFTWDL-GGHVIFSHYQYFDDVMDWAV-QGWNVLQR--ESWVWV-RGRWVPYPFQN--NI--HRLPEQDRKR 119 (484)
T ss_dssp --------SCEEES-SCCCBCCSBHHHHHHHHHHC-SCEEEEEC--CCEEEE-TTEEEESSGGG--CG--GGSCHHHHHH
T ss_pred --------CcEEee-CCcccccChHHHHHHHHHHh-hhhhhccC--ceEEEE-CCEEEEeCccc--hh--hhCCHHHHHH
Confidence 234666 466665444 5566666654 33333222 233443 78888888421 11 2244333322
Q ss_pred -HHHHHHHHHhhcCCCccccccccccccccCCcHHHHHHhcCCChhhHH-HHH-HHHHhccCCcchhhhhhchhhHHH--
Q 015413 178 -LMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKS-IVL-YAIAMADYDQEVSEYVLKTRDGIN-- 252 (407)
Q Consensus 178 -l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~s~~~~l~-- 252 (407)
+..++.. ... .....+.++.+|+.+. +.+.+.+ ++. +..... ..++ .++|+.+.+.
T Consensus 120 ~~~~ll~~-~~~-------------~~~~~~~s~~e~~~~~-~g~~~~~~~~~p~~~~v~--~~~~--~~ls~~~~~~r~ 180 (484)
T 4dsg_A 120 CLDELVRS-HAR-------------TYTEPPNNFEESFTRQ-FGEGIADIFMRPYNFKVW--AVPP--CLMSTEWVEERV 180 (484)
T ss_dssp HHHHHHHH-HHC-------------CCSSCCSSHHHHHHHH-HHHHHCCCCCHHHHHHHH--SSCG--GGBCSSSCTTTS
T ss_pred HHHHHHHH-Hhc-------------cCCCCCCCHHHHHHHH-hHHHHHHHHHHHHHhhhc--CCCH--HHhcHHHHhccc
Confidence 2233332 110 1123467899998753 2222111 111 111111 1222 2244432111
Q ss_pred ------H-HHHHHHhhcc--ccCCCcceEeec-CCcchHHHHHHHHHHhcCcEEEeC--CceeEEEEecCCCcEEEEEeC
Q 015413 253 ------R-LALYNSSIGR--FQNALGALIYPI-YGQGELPQAFCRRAAVKGCLYVLR--MPVISLLTDQNSGSYKGVRLA 320 (407)
Q Consensus 253 ------~-~~~~~~s~~~--~~~~~~~~~~p~-gG~~~l~~al~r~~~~~Gg~i~l~--~~V~~I~~~~~~g~~~gV~~~ 320 (407)
. +...+..... ++ ..+.+.||. ||+++|+++|++.+.. .+|+++ ++|++|..+ ++ +|+++
T Consensus 181 ~~~~l~~~~~~~~~~~~~~~~~-~~~~f~yp~~gG~~~l~~~la~~l~~--~~i~~~~~~~V~~I~~~--~~---~v~~~ 252 (484)
T 4dsg_A 181 APVDLERIRRNIQENRDDLGWG-PNATFRFPQRGGTGIIYQAIKEKLPS--EKLTFNSGFQAIAIDAD--AK---TITFS 252 (484)
T ss_dssp CCCCHHHHHHHHHHTCCCCCCS-TTSEEEEESSSCTHHHHHHHHHHSCG--GGEEECGGGCEEEEETT--TT---EEEET
T ss_pred cCCCHHHHHHHHhhcccccCCC-ccceEEeecCCCHHHHHHHHHhhhhh--CeEEECCCceeEEEEec--CC---EEEEC
Confidence 1 1111111000 11 112367775 8999999999875432 289999 569999875 45 35568
Q ss_pred CCcEEEcCEEEE-CCCCCCCCCCccchhhhhhhhhhhcccCCCceEEEEEEEeCCCC
Q 015413 321 SGQDILSHKLVL-DPSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSL 376 (407)
Q Consensus 321 ~G~~i~Ad~VI~-~p~~~~~~~~~~~~p~lp~~~~~~~~~~~~g~~~k~i~i~~~p~ 376 (407)
+|++++||+||+ .|...+.++..+..|++|+...+..+..++..+.++.+.|+++.
T Consensus 253 ~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~l~~l~y~s~~~v~l~~~~~~ 309 (484)
T 4dsg_A 253 NGEVVSYDYLISTVPFDNLLRMTKGTGFKGYDEWPAIADKMVYSSTNVIGIGVKGTP 309 (484)
T ss_dssp TSCEEECSEEEECSCHHHHHHHEECSSCTTGGGHHHHHHHCCEEEEEEEEEEEESCC
T ss_pred CCCEEECCEEEECCCHHHHHHHhhccCCCCCHHHHHHHhCCCcCceEEEEEEEcCCC
Confidence 899999999995 45554444432223457777777777888999999999999874
No 22
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.86 E-value=2.7e-21 Score=194.61 Aligned_cols=305 Identities=13% Similarity=0.104 Sum_probs=165.4
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccccchhhhhhhhccCCCCCCCCCCCcccccccccccccc
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRL 100 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (407)
..+||+|||||++||+||+.|+++|++|+|||+++++||+++|.+... .+....+.. .
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~~~~~~~~--~~~~~~~~~--------------------~ 67 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVWTARGGS--EETDLSGET--------------------Q 67 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEETTC--EEECTTSCE--------------------E
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCceeeeccCc--ccccccchh--------------------h
Confidence 467999999999999999999999999999999999999999876432 111111000 0
Q ss_pred ccCCCCceEEecCCCeEEeeCcHHHHHHHhcCcccccccccc-cceeeE-ccC----CceeecCCCHHHHhhhccCChHH
Q 015413 101 LSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSI-DATFML-DAD----AKLCSVPDSRAAIFKDKSLGLME 174 (407)
Q Consensus 101 ~~~~~~~~~idl~Gp~~~~~~~~~~~~l~~~g~~~~~~f~~~-~~~~~~-~~~----g~~~~~p~~~~~~~~~~~l~~~~ 174 (407)
.......+.+|. |+..++....+.+++.+.|+... .+... ...+++ ..+ |+...+|....+.+
T Consensus 68 ~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--------- 136 (489)
T 2jae_A 68 KCTFSEGHFYNV-GATRIPQSHITLDYCRELGVEIQ-GFGNQNANTFVNYQSDTSLSGQSVTYRAAKADTF--------- 136 (489)
T ss_dssp ECCCCTTCEEES-SCCCEETTSTHHHHHHHHTCCEE-EECCCCTTSEEECCCSSTTTTCCEEHHHHHHHHH---------
T ss_pred hhcccCCCcCCc-chhhcccHHHHHHHHHHcCCceE-EccccCCCceEEecCCcccCCccccHHHHhhhhh---------
Confidence 001123445677 57766555578888988887532 12211 123333 312 44443321110000
Q ss_pred HHHHHHHHHHHHhhcCCCccccccccccccccCCcHHHHHHhcCCCh-------h-hHHHHHHHHHhccCCcchhhhhhc
Q 015413 175 KNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPH-------K-IKSIVLYAIAMADYDQEVSEYVLK 246 (407)
Q Consensus 175 k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~s 246 (407)
..+..++....+.... . +......+.++.+|+++++... . ...++............+...++.
T Consensus 137 -~~~~~l~~~~~~~~~~-~------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (489)
T 2jae_A 137 -GYMSELLKKATDQGAL-D------QVLSREDKDALSEFLSDFGDLSDDGRYLGSSRRGYDSEPGAGLNFGTEKKPFAMQ 208 (489)
T ss_dssp -HHHHHHHHHHHHHTTT-T------TTSCHHHHHHHHHHHHHHTTCCTTSCCCCCGGGCEEECCCBTTCCCEECCCCCHH
T ss_pred -ccHHHHHHHHHhcccc-c------cccchhhHHHHHHHHHHhhhhhhccccccccchhhccCCCcccccCCCCCCcCHH
Confidence 0011111111110000 0 0000112346777777532110 0 000000000000000000000000
Q ss_pred hhhHHHHHHHHHHhhccccCCCcceEeecCCcchHHHHHHHHHHhcC-cEEEeCCceeEEEEecCCCcEEEEEeCCC---
Q 015413 247 TRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKG-CLYVLRMPVISLLTDQNSGSYKGVRLASG--- 322 (407)
Q Consensus 247 ~~~~l~~~~~~~~s~~~~~~~~~~~~~p~gG~~~l~~al~r~~~~~G-g~i~l~~~V~~I~~~~~~g~~~gV~~~~G--- 322 (407)
.... ..+..++........ ...+++++||+++|+++|++.+ + ++|++|++|++|..+ ++++ .|++.+|
T Consensus 209 ~~~~-~~~~~~~~~~~~~~~-~~~~~~~~gG~~~l~~~l~~~l---~~~~i~~~~~V~~i~~~--~~~v-~v~~~~g~~~ 280 (489)
T 2jae_A 209 EVIR-SGIGRNFSFDFGYDQ-AMMMFTPVGGMDRIYYAFQDRI---GTDNIVFGAEVTSMKNV--SEGV-TVEYTAGGSK 280 (489)
T ss_dssp HHHH-HTTTTTGGGGGCTTT-SSSEEEETTCTTHHHHHHHHHH---CGGGEETTCEEEEEEEE--TTEE-EEEEEETTEE
T ss_pred HHhh-hhHHHHHhhhhcccc-CccEEeecCCHHHHHHHHHHhc---CCCeEEECCEEEEEEEc--CCeE-EEEEecCCeE
Confidence 0000 000111111001111 1237789999999999998754 4 789999999999987 5554 5776666
Q ss_pred cEEEcCEEEE-CCCCCCCCCCccchhhhhhhhhhhcccCCCceEEEEEEEeCCCCCC
Q 015413 323 QDILSHKLVL-DPSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKP 378 (407)
Q Consensus 323 ~~i~Ad~VI~-~p~~~~~~~~~~~~p~lp~~~~~~~~~~~~g~~~k~i~i~~~p~~~ 378 (407)
++++||+||+ .|...+..+. + +||+.+....++.+++.+.|+++.|++|||+
T Consensus 281 ~~~~ad~vI~a~p~~~l~~l~--~--~l~~~~~~~l~~~~~~~~~kv~l~~~~~~w~ 333 (489)
T 2jae_A 281 KSITADYAICTIPPHLVGRLQ--N--NLPGDVLTALKAAKPSSSGKLGIEYSRRWWE 333 (489)
T ss_dssp EEEEESEEEECSCHHHHTTSE--E--CCCHHHHHHHHTEECCCEEEEEEEESSCHHH
T ss_pred EEEECCEEEECCCHHHHHhCc--c--CCCHHHHHHHHhCCCccceEEEEEeCCCCcc
Confidence 6799999995 4655666653 2 6888777766777899999999999999873
No 23
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.86 E-value=1e-20 Score=186.94 Aligned_cols=273 Identities=14% Similarity=0.129 Sum_probs=152.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCC-CeEEEEccCCCCCCcccccchhhhhhhhccCCCCCCCCCCCccccccccccccc
Q 015413 21 TAFDLIVIGTGLPESVISAAASASG-KSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G-~~VlvlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (407)
..+||||||||++||+||+.|+++| ++|+|||+++++||+++|++.+|
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~~~G------------------------------- 53 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPNYHG------------------------------- 53 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCEETT-------------------------------
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccCCCC-------------------------------
Confidence 4589999999999999999999999 99999999999999999976543
Q ss_pred cccCCCCceEEecCCCeEEeeC-cHHHHHHHhcCcccccccccccceeeEccCCceeecCCCHHHHhhhccCChHHHHHH
Q 015413 100 LLSQHPRNFNLDVSGPRVLFCA-DHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQL 178 (407)
Q Consensus 100 ~~~~~~~~~~idl~Gp~~~~~~-~~~~~~l~~~g~~~~~~f~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~l~~~~k~~l 178 (407)
+.+|+ |++++... ..+.+++.+.|+... .......+.+ .+|+.. .|.. +.... +.....+
T Consensus 54 --------~~~d~-G~~~~~~~~~~~~~l~~~~g~~~~--~~~~~~~~~~-~~g~~~-~~~~--~~~~~----~~~~~~~ 114 (424)
T 2b9w_A 54 --------RRYEM-GAIMGVPSYDTIQEIMDRTGDKVD--GPKLRREFLH-EDGEIY-VPEK--DPVRG----PQVMAAV 114 (424)
T ss_dssp --------EECCS-SCCCBCTTCHHHHHHHHHHCCCCC--SCCCCEEEEC-TTSCEE-CGGG--CTTHH----HHHHHHH
T ss_pred --------ccccc-CceeecCCcHHHHHHHHHhCCccc--cccccceeEc-CCCCEe-cccc--Ccccc----hhHHHHH
Confidence 23455 46655333 467788888886421 1111112222 255543 2211 00000 0011122
Q ss_pred HHHHHHHHhhcCCCccccccccccccccCCcHHHHHHhcCCChhhHHHHHHHHHhccCCcchhhhhhchhhHHHHHHHHH
Q 015413 179 MRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYN 258 (407)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~ 258 (407)
.++...+......... ........+.+..|+.+|+++.+.+. ..+.+...+....+. ++ .++++...+ .|.
T Consensus 115 ~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~l~~~~~~~-~~~~~~~~~~~~~~~-~~--~~~~a~~~~----~~~ 185 (424)
T 2b9w_A 115 QKLGQLLATKYQGYDA-NGHYNKVHEDLMLPFDEFLALNGCEA-ARDLWINPFTAFGYG-HF--DNVPAAYVL----KYL 185 (424)
T ss_dssp HHHHHHHHTTTTTTTS-SSSSSCCCGGGGSBHHHHHHHTTCGG-GHHHHTTTTCCCCCC-CT--TTSBHHHHH----HHS
T ss_pred HHHHHHHhhhhhhccc-ccchhhhhhhhccCHHHHHHhhCcHH-HHHHHHHHHHhhccC-Ch--HhcCHHHHH----Hhh
Confidence 2332222221111000 00000012345689999999887764 444322111111121 22 234554322 222
Q ss_pred Hhhc--cccCCCcceEeecCCcchHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE-CCC
Q 015413 259 SSIG--RFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL-DPS 335 (407)
Q Consensus 259 ~s~~--~~~~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~-~p~ 335 (407)
...+ .+.. +..+++.+|+++++++|.+ ..+.+|++|++|++|..+ ++++ .|++.+|+ ++||+||+ .|.
T Consensus 186 ~~~~~~~~~~--~~~~~~~~g~~~l~~~l~~---~l~~~v~~~~~V~~i~~~--~~~v-~v~~~~g~-~~ad~Vv~a~~~ 256 (424)
T 2b9w_A 186 DFVTMMSFAK--GDLWTWADGTQAMFEHLNA---TLEHPAERNVDITRITRE--DGKV-HIHTTDWD-RESDVLVLTVPL 256 (424)
T ss_dssp CHHHHHHHHH--TCCBCCTTCHHHHHHHHHH---HSSSCCBCSCCEEEEECC--TTCE-EEEESSCE-EEESEEEECSCH
T ss_pred hHhhhhcccC--CceEEeCChHHHHHHHHHH---hhcceEEcCCEEEEEEEE--CCEE-EEEECCCe-EEcCEEEECCCH
Confidence 1110 0110 1245789999999998864 456789999999999876 5554 58877774 99999995 344
Q ss_pred CCCCCCCccchhhhhhhhhhhcccCCCceEE
Q 015413 336 FTVPGSLASSHQQLQESFQAFSLSDNKGKVA 366 (407)
Q Consensus 336 ~~~~~~~~~~~p~lp~~~~~~~~~~~~g~~~ 366 (407)
..+.++ .|++|+.+..+ ....+..+.
T Consensus 257 ~~~~~~----l~~~~~~~~~~-~~~~~~~~~ 282 (424)
T 2b9w_A 257 EKFLDY----SDADDDEREYF-SKIIHQQYM 282 (424)
T ss_dssp HHHTTS----BCCCHHHHHHH-TTCEEEEEE
T ss_pred HHHhhc----cCCCHHHHHHH-hcCCcceeE
Confidence 433332 35556655544 333344443
No 24
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.83 E-value=2.1e-19 Score=188.84 Aligned_cols=277 Identities=12% Similarity=0.106 Sum_probs=161.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccccchhhhhhhhccCCCCCCCCCCCccccccccccccc
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (407)
+..+||||||||++||+||..|+++|++|+|||+++++||+++|....
T Consensus 334 ~~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ggri~T~~~~-------------------------------- 381 (776)
T 4gut_A 334 YHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWDDKSF-------------------------------- 381 (776)
T ss_dssp GTSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTTCCEECCS--------------------------------
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceeceeeecccc--------------------------------
Confidence 346899999999999999999999999999999999999999986421
Q ss_pred cccCCCCceEEecCCCeEEee--CcHHHHHHHhcCcccccccccccceeeEccCCceeecCCCHHHHhhhccCChHHHHH
Q 015413 100 LLSQHPRNFNLDVSGPRVLFC--ADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQ 177 (407)
Q Consensus 100 ~~~~~~~~~~idl~Gp~~~~~--~~~~~~~l~~~g~~~~~~f~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~l~~~~k~~ 177 (407)
..+.+|+ |.+++.+ ...+..++.+.|+..... ... .. ++..+|.... . .... .....
T Consensus 382 ------~G~~vd~-Ga~~i~G~~~np~~~l~~~lGl~~~~~-~~~-~~-l~~~~g~~~~----~-~~~~------~~~~~ 440 (776)
T 4gut_A 382 ------KGVTVGR-GAQIVNGCINNPVALMCEQLGISMHKF-GER-CD-LIQEGGRITD----P-TIDK------RMDFH 440 (776)
T ss_dssp ------TTCCEES-SCCEEECCTTCHHHHHHHHHTCCCEEC-CSC-CC-EECTTSCBCC----H-HHHH------HHHHH
T ss_pred ------CCeEecc-CCeEEeCCccChHHHHHHHhCCccccc-ccc-cc-eEccCCcccc----h-hHHH------HHHHH
Confidence 1233566 4666643 335666777777643211 111 01 1221332211 0 0000 00111
Q ss_pred HHHHHHHHHhhcCCCccccccccccccccCCc--------HHHHHHhcCCChhhH--HHHHH---HHHhccCCcchhhhh
Q 015413 178 LMRFFKLVQGHLSLDESEENNVRISEEDLDSP--------FAEFLTKMKLPHKIK--SIVLY---AIAMADYDQEVSEYV 244 (407)
Q Consensus 178 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s--------~~~~l~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~ 244 (407)
+.+++..+..+.... ....+.+ +.+|++..+..-... ..+.+ .+... ..... ..
T Consensus 441 ~~~ll~~~~~~~~~~----------~~~~d~sl~~~~~~~~~~~l~~~gv~~~~l~~~~l~~~~~~l~~~-~G~~l--~~ 507 (776)
T 4gut_A 441 FNALLDVVSEWRKDK----------TQLQDVPLGEKIEEIYKAFIKESGIQFSELEGQVLQFHLSNLEYA-CGSNL--HQ 507 (776)
T ss_dssp HHHHHHHHHHHGGGC----------CGGGCCBHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHH-HTSCT--TS
T ss_pred HHHHHHHHHHHhhcc----------cccccccHHHHHHHHHHHHHHhcCCCccchhHHHHHHHHHHHHHh-cCCCh--HH
Confidence 222222222221100 0112223 334445444431111 11100 00000 00000 01
Q ss_pred hchhhHHHHHHHHHHhhccccCCCcceEeecCCcchHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcE
Q 015413 245 LKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQD 324 (407)
Q Consensus 245 ~s~~~~l~~~~~~~~s~~~~~~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~ 324 (407)
++... + .....+....+....+.+|++.+.++|++ |.+|+++++|++|..+ ++. +.|++.+|++
T Consensus 508 ls~~~-------~-~~~~~~~~~~G~~~~~~~G~~~l~~aLa~-----gl~I~l~t~V~~I~~~--~~~-v~V~~~~G~~ 571 (776)
T 4gut_A 508 VSARS-------W-DHNEFFAQFAGDHTLLTPGYSVIIEKLAE-----GLDIQLKSPVQCIDYS--GDE-VQVTTTDGTG 571 (776)
T ss_dssp BBTTT-------T-TGGGGSCCCCSCEEECTTCTHHHHHHHHT-----TSCEESSCCEEEEECS--SSS-EEEEETTCCE
T ss_pred cChhh-------h-hhhhhHHhcCCCeEEECChHHHHHHHHHh-----CCcEEcCCeeEEEEEc--CCE-EEEEECCCcE
Confidence 11110 0 00001111113356789999999988763 6789999999999986 444 4688889999
Q ss_pred EEcCEEEE-CCCCCCCCCCccchhhhhhhhhhhcccCCCceEEEEEEEeCCCCCC
Q 015413 325 ILSHKLVL-DPSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKP 378 (407)
Q Consensus 325 i~Ad~VI~-~p~~~~~~~~~~~~p~lp~~~~~~~~~~~~g~~~k~i~i~~~p~~~ 378 (407)
++||+||+ .|..++.+..+.|.|+||+.+.+..+...+|.+.|+++.|++|||.
T Consensus 572 i~Ad~VIvA~P~~vL~~~~i~f~P~Lp~~~~~ai~~l~~g~~~KV~l~f~~~FW~ 626 (776)
T 4gut_A 572 YSAQKVLVTVPLALLQKGAIQFNPPLSEKKMKAINSLGAGIIEKIALQFPYRFWD 626 (776)
T ss_dssp EEESEEEECCCHHHHHTTCSEEESCCCHHHHHHHHHEEEECCEEEEEECSSCTTH
T ss_pred EEcCEEEECCCHHHHhhcccccCCCCCHHHHHHHHhCCCeeEEEEEEecCccccc
Confidence 99999995 5766655444668999999888877888899999999999999994
No 25
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.81 E-value=1.3e-18 Score=181.08 Aligned_cols=103 Identities=12% Similarity=-0.020 Sum_probs=83.4
Q ss_pred cceEeecCCcchHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCC------CcEEEcCEEEE-CCCCCCCCC
Q 015413 269 GALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLAS------GQDILSHKLVL-DPSFTVPGS 341 (407)
Q Consensus 269 ~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~------G~~i~Ad~VI~-~p~~~~~~~ 341 (407)
+.++.++||++.|+++|++ +..|+||++|++|..+ ++. +.|++.+ |++++||+||+ .|..++.++
T Consensus 391 g~~~~~~gG~~~l~~~La~-----~l~I~l~~~V~~I~~~--~~~-v~V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l 462 (662)
T 2z3y_A 391 GSHLTVRNGYSCVPVALAE-----GLDIKLNTAVRQVRYT--ASG-CEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQ 462 (662)
T ss_dssp SCCEEETTCTTHHHHHHTT-----TCEEETTEEEEEEEEE--TTE-EEEEEEESSCTTCEEEEEESEEEECCCHHHHHCS
T ss_pred CceeeecCcHHHHHHHHHh-----cCceecCCeEEEEEEC--CCc-EEEEEeecccCCCCeEEEeCEEEECCCHHHHhcc
Confidence 3467899999999998875 4589999999999987 444 4666555 56899999996 476666552
Q ss_pred --CccchhhhhhhhhhhcccCCCceEEEEEEEeCCCCCCC
Q 015413 342 --LASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPD 379 (407)
Q Consensus 342 --~~~~~p~lp~~~~~~~~~~~~g~~~k~i~i~~~p~~~~ 379 (407)
.+.|.|+||+.+.+..++..||.+.|+++.|++|||+.
T Consensus 463 ~~~i~f~P~LP~~k~~Ai~~l~~g~~~KV~l~f~~~fW~~ 502 (662)
T 2z3y_A 463 PPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDP 502 (662)
T ss_dssp SCSSEEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCT
T ss_pred cCceEEcCCCCHHHHHHHHhCCccceeEEEEEcCcccccC
Confidence 25689999998887778888999999999999999974
No 26
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.80 E-value=1.1e-18 Score=184.59 Aligned_cols=103 Identities=12% Similarity=-0.020 Sum_probs=83.3
Q ss_pred cceEeecCCcchHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCC------CcEEEcCEEEE-CCCCCCCCC
Q 015413 269 GALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLAS------GQDILSHKLVL-DPSFTVPGS 341 (407)
Q Consensus 269 ~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~------G~~i~Ad~VI~-~p~~~~~~~ 341 (407)
+.+++++||++.|+++|++ +..|+||++|++|..+ ++. +.|++.+ |++++||+||+ .|..++.++
T Consensus 562 g~~~~~~gG~~~L~~aLa~-----~l~I~Lnt~V~~I~~~--~~g-V~V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~l 633 (852)
T 2xag_A 562 GSHLTVRNGYSCVPVALAE-----GLDIKLNTAVRQVRYT--ASG-CEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQ 633 (852)
T ss_dssp SCCEEETTCTTHHHHHHTT-----TCCEECSEEEEEEEEE--TTE-EEEEEEESSSTTCEEEEEESEEEECCCHHHHHCS
T ss_pred CceEEecCcHHHHHHHHHh-----CCCEEeCCeEEEEEEc--CCc-EEEEEeecccCCCCeEEECCEEEECCCHHHHHhh
Confidence 3467899999999998875 3479999999999987 444 4566544 56899999996 476666553
Q ss_pred --CccchhhhhhhhhhhcccCCCceEEEEEEEeCCCCCCC
Q 015413 342 --LASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPD 379 (407)
Q Consensus 342 --~~~~~p~lp~~~~~~~~~~~~g~~~k~i~i~~~p~~~~ 379 (407)
.+.|.|+||+.+.+..++..+|.+.|+++.|++|||+.
T Consensus 634 ~~~I~F~P~LP~~k~~AI~~l~~g~v~KV~L~F~~~fW~~ 673 (852)
T 2xag_A 634 PPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDP 673 (852)
T ss_dssp SCSSEEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCT
T ss_pred hcccccCCCCCHHHHHHHHcCCccceEEEEEEcCCcccCC
Confidence 25689999998887778888999999999999999975
No 27
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.80 E-value=2e-20 Score=183.48 Aligned_cols=270 Identities=12% Similarity=0.109 Sum_probs=152.0
Q ss_pred CcccEEEECCChhHHHHHHHHhhC-CCeEEEEccCCCCCCcccccchhhhhhhhccCCCCCCCCCCCccccccccccccc
Q 015413 21 TAFDLIVIGTGLPESVISAAASAS-GKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~-G~~VlvlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (407)
.++||||||||++||+||..|+++ |++|+|||+++++||++.|.....
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~~~~~------------------------------- 54 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAEPQ------------------------------- 54 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEEECTT-------------------------------
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeeccccC-------------------------------
Confidence 469999999999999999999999 999999999999999999976420
Q ss_pred cccCCCCceEEe-cCCCeEEeeC-cHHHHHHHhcCcccccccccccceeeEccCCceeecCCCHHH---HhhhccCChHH
Q 015413 100 LLSQHPRNFNLD-VSGPRVLFCA-DHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAA---IFKDKSLGLME 174 (407)
Q Consensus 100 ~~~~~~~~~~id-l~Gp~~~~~~-~~~~~~l~~~g~~~~~~f~~~~~~~~~~~~g~~~~~p~~~~~---~~~~~~l~~~~ 174 (407)
..+.+| . |++++... ..+.+++.+.|.. ..+. ...+++. +|+.+++|.+... ++. ..+.+.+
T Consensus 55 ------~g~~~~~~-G~~~~~~~~~~~~~~~~~~g~~--~~~~--~~~~~~~-~G~~~~~p~~~~~~~~l~~-~~~~~~~ 121 (399)
T 1v0j_A 55 ------TGIEVHKY-GAHLFHTSNKRVWDYVRQFTDF--TDYR--HRVFAMH-NGQAYQFPMGLGLVSQFFG-KYFTPEQ 121 (399)
T ss_dssp ------TCCEEETT-SCCCEEESCHHHHHHHTTTCCB--CCCC--CCEEEEE-TTEEEEESSSHHHHHHHHT-SCCCHHH
T ss_pred ------CCEEEEeC-CCcEEcCCcHHHHHHHHHhhhh--hccc--cceEEEE-CCEEEeCCCCHHHHHHHhc-ccCCHHH
Confidence 122343 4 57766543 4778888887762 1222 1223333 7898888876422 221 1112222
Q ss_pred HHHHHHHHHHHHhhcCCCccccccccccccccCCcHHHHHHhcCCChhhHH-HHH-HHHHhccCCcchhhhhhchhhHHH
Q 015413 175 KNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKS-IVL-YAIAMADYDQEVSEYVLKTRDGIN 252 (407)
Q Consensus 175 k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~s~~~~l~ 252 (407)
+.+++....... ....+.++.+|+.+. ..+.+.+ ++. +..... ..++ .++|+....
T Consensus 122 ---~~~~l~~~~~~~-------------~~~~~~s~~e~l~~~-~g~~~~~~~~~~~~~~~~--~~~~--~~ls~~~~~- 179 (399)
T 1v0j_A 122 ---ARQLIAEQAAEI-------------DTADAQNLEEKAISL-IGRPLYEAFVKGYTAKQW--QTDP--KELPAANIT- 179 (399)
T ss_dssp ---HHHHHHHHGGGS-------------CTTC----CCHHHHH-HCHHHHHHHTHHHHHHHH--TSCG--GGSCGGGCS-
T ss_pred ---HHHHHHHHhhcc-------------CCCCcccHHHHHHHH-HhHHHHHHHHHHHHHhhc--CCCh--hhcChHhhh-
Confidence 222222211110 012346788888763 3433333 322 111222 2232 235553310
Q ss_pred HHHHHHHhhccccCCCcceE-eecCCcchHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEE-EcCEE
Q 015413 253 RLALYNSSIGRFQNALGALI-YPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDI-LSHKL 330 (407)
Q Consensus 253 ~~~~~~~s~~~~~~~~~~~~-~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i-~Ad~V 330 (407)
++.........+. ...+. +|+||+++|+++|++ ..|++|+||++|++|.. . | . ++ +||+|
T Consensus 180 ~~~~~~~~~~~~~--~~~~~~~p~gG~~~l~~~l~~---~~g~~I~l~~~V~~I~~---~-----v--~---~~~~aD~V 241 (399)
T 1v0j_A 180 RLPVRYTFDNRYF--SDTYEGLPTDGYTAWLQNMAA---DHRIEVRLNTDWFDVRG---Q-----L--R---PGSPAAPV 241 (399)
T ss_dssp CCCCCSSSCCCSC--CCSEEECBTTHHHHHHHHHTC---STTEEEECSCCHHHHHH---H-----H--T---TTSTTCCE
T ss_pred cceeEeccccchh--hhhhcccccccHHHHHHHHHh---cCCeEEEECCchhhhhh---h-----h--h---hcccCCEE
Confidence 0000000000111 01243 999999999998875 57899999999999853 1 2 1 35 79999
Q ss_pred EEC-CCCCCCCCCccchhhhhhhhhhhcccCCCceEEEEEEEeCCCCCCCCCcEEEEeCCC
Q 015413 331 VLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPDLSNFLVIFPPR 390 (407)
Q Consensus 331 I~~-p~~~~~~~~~~~~p~lp~~~~~~~~~~~~g~~~k~i~i~~~p~~~~~~~~~~~~p~~ 390 (407)
|++ |...+.++. ....++.++....+.++.|...+ ...+.+|..
T Consensus 242 I~t~p~~~l~~~~--------------l~~l~y~s~~~~~~~~~~~~~~~--~~~~~~~~~ 286 (399)
T 1v0j_A 242 VYTGPLDRYFDYA--------------EGRLGWRTLDFEVEVLPIGDFQG--TAVMNYNDL 286 (399)
T ss_dssp EECSCHHHHTTTT--------------TCCCCEEEEEEEEEEESSSCSSS--SSEEEECCT
T ss_pred EECCcHHHHHhhh--------------hCCCCcceEEEEEEEEccccCCC--CeEEEeCCC
Confidence 953 443333321 12345666677777888775432 235666653
No 28
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.80 E-value=4e-19 Score=183.41 Aligned_cols=108 Identities=9% Similarity=-0.031 Sum_probs=80.9
Q ss_pred eEeecCCcchHHHHHHHHHHhcCcEEEeCCcee--EEEEecCCC-----cEEEE-EeCCCc--EEEcCEEEE-CCCCCCC
Q 015413 271 LIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVI--SLLTDQNSG-----SYKGV-RLASGQ--DILSHKLVL-DPSFTVP 339 (407)
Q Consensus 271 ~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~--~I~~~~~~g-----~~~gV-~~~~G~--~i~Ad~VI~-~p~~~~~ 339 (407)
+.++.||+++|+++|++.+.. |+.|+|+++|+ +|.++. ++ ..+.| ...+|+ +++||+||+ .|...+.
T Consensus 339 ~~~i~GG~~~L~~aLa~~l~~-g~~I~l~~~V~~~~I~~~~-~g~~~~~~~V~V~~~~~G~~~~~~aD~VIvTvP~~~L~ 416 (721)
T 3ayj_A 339 YTLPVTENVEFIRNLFLKAQN-VGAGKLVVQVRQERVANAC-HSGTASARAQLLSYDSHNAVHSEAYDFVILAVPHDQLT 416 (721)
T ss_dssp ECCSSSSTHHHHHHHHHHHHH-HTTTSEEEEEECEEEEEEE-ECSSSSCCEEEEEEETTCCEEEEEESEEEECSCHHHHH
T ss_pred eeEECCcHHHHHHHHHHhccc-CCceEeCCEEEeeeEEECC-CCCccccceEEEEEecCCceEEEEcCEEEECCCHHHHh
Confidence 678999999999999876532 77899999999 999863 33 13466 446777 799999997 4644441
Q ss_pred ----CCCcc-------c--------------hhh-h-h-------hhhhhhcccCCCceEEEEEEEe-----CCCCCCCC
Q 015413 340 ----GSLAS-------S--------------HQQ-L-Q-------ESFQAFSLSDNKGKVARGICIT-----RSSLKPDL 380 (407)
Q Consensus 340 ----~~~~~-------~--------------~p~-l-p-------~~~~~~~~~~~~g~~~k~i~i~-----~~p~~~~~ 380 (407)
+..+. + .|| | | ..++...++..|+..+|+.+.| ++|||++.
T Consensus 417 ~~~~r~~i~~~~~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~~~s~Kv~l~~~~~~~~~~fW~~~ 496 (721)
T 3ayj_A 417 PIVSRSGFEHAASQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIGQLHMARSSKVFATVKTAALDQPWVPQW 496 (721)
T ss_dssp HHHSSSCSSCEEEEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHTCCEECEEEEEEEEEGGGGGSTTSCEE
T ss_pred hccccccccccccccccccccccccccccccCCcccCCcccccccHHHHHHHHhcCcccceEEEEEEccccCCCCccccc
Confidence 11233 2 354 6 8 7777777888899999999999 99999754
No 29
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.77 E-value=3.7e-19 Score=172.44 Aligned_cols=264 Identities=12% Similarity=0.128 Sum_probs=150.4
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccccchhhhhhhhccCCCCCCCCCCCccccccccccccccc
Q 015413 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLL 101 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (407)
++||+|||||++||+||..|+++|++|+|+|+++++||++.+...++
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g--------------------------------- 47 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTEDCEG--------------------------------- 47 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEEEETT---------------------------------
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEeeccCC---------------------------------
Confidence 37999999999999999999999999999999999999999875432
Q ss_pred cCCCCceEEe-cCCCeEEeeCc-HHHHHHHhcCcccccccccccceeeEccCCceeecCCCHHHHhhhccCChHHHHHHH
Q 015413 102 SQHPRNFNLD-VSGPRVLFCAD-HAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLM 179 (407)
Q Consensus 102 ~~~~~~~~id-l~Gp~~~~~~~-~~~~~l~~~g~~~~~~f~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~l~~~~k~~l~ 179 (407)
+.+| . |++++.... .+.+++.+.+.. ..+... .+.+. +|+.+++|.+...+... +.......+.
T Consensus 48 ------~~~~~~-G~~~~~~~~~~~~~~~~~l~~~--~~~~~~--~~~~~-~g~~~~~p~~~~~~~~l--~~~~~~~~~~ 113 (367)
T 1i8t_A 48 ------IQIHKY-GAHIFHTNDKYIWDYVNDLVEF--NRFTNS--PLAIY-KDKLFNLPFNMNTFHQM--WGVKDPQEAQ 113 (367)
T ss_dssp ------EEEETT-SCCCEEESCHHHHHHHHTTSCB--CCCCCC--CEEEE-TTEEEESSBSHHHHHHH--HCCCCHHHHH
T ss_pred ------ceeecc-CCceecCCCHHHHHHHHHhhhh--hhcccc--ceEEE-CCeEEEcCCCHHHHHHH--hccCCHHHHH
Confidence 2343 4 577765543 666777666532 222221 12222 78888888764332211 1100122233
Q ss_pred HHHHHHHhhcCCCccccccccccccccCCcHHHHHHhcCCChhhHHHHH--HHHHhccCCcchhhhhhchhhHHHHHHHH
Q 015413 180 RFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVL--YAIAMADYDQEVSEYVLKTRDGINRLALY 257 (407)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~s~~~~l~~~~~~ 257 (407)
+++....... ....+.++.+|+.+. +.+.+.+.+. +..... ..++ .++|+... .++. .
T Consensus 114 ~~l~~~~~~~-------------~~~~~~s~~~~~~~~-~g~~~~~~~~~p~~~~~~--~~~~--~~lsa~~~-~~l~-~ 173 (367)
T 1i8t_A 114 NIINAQKKKY-------------GDKVPENLEEQAISL-VGEDLYQALIKGYTEKQW--GRSA--KELPAFII-KRIP-V 173 (367)
T ss_dssp HHHHHHTTTT-------------CCCCCCSHHHHHHHH-HHHHHHHHHTHHHHHHHH--SSCG--GGSCTTSS-CCCC-B
T ss_pred HHHHHHhhcc-------------CCCCCccHHHHHHHH-HhHHHHHHHHHHHHhhhh--CCCh--HHcCHHHH-hhce-e
Confidence 4443322210 112457899999865 4444443222 111222 2333 23555321 0000 0
Q ss_pred HHhh-ccccCCCcceE-eecCCcchHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC-C
Q 015413 258 NSSI-GRFQNALGALI-YPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD-P 334 (407)
Q Consensus 258 ~~s~-~~~~~~~~~~~-~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~-p 334 (407)
.... ..+. .+.+. +|+||+++|+++|++ |++|+||++|++|.. + | ++.||+||++ |
T Consensus 174 ~~~~~~~~~--~~~~~~~p~gG~~~l~~~l~~-----g~~i~l~~~V~~i~~-----~---v------~~~~D~VV~a~p 232 (367)
T 1i8t_A 174 RFTFDNNYF--SDRYQGIPVGGYTKLIEKMLE-----GVDVKLGIDFLKDKD-----S---L------ASKAHRIIYTGP 232 (367)
T ss_dssp CSSSCCCSC--CCSEEECBTTCHHHHHHHHHT-----TSEEECSCCGGGSHH-----H---H------HTTEEEEEECSC
T ss_pred eeccccccc--cchhhcccCCCHHHHHHHHhc-----CCEEEeCCceeeech-----h---h------hccCCEEEEecc
Confidence 0000 0111 12353 999999999998875 689999999998841 1 2 2458999953 4
Q ss_pred CCCCCCCCccchhhhhhhhhhhcccCCCceEEEEEEEeCCCCCCCCCcEEEEeCC
Q 015413 335 SFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPDLSNFLVIFPP 389 (407)
Q Consensus 335 ~~~~~~~~~~~~p~lp~~~~~~~~~~~~g~~~k~i~i~~~p~~~~~~~~~~~~p~ 389 (407)
...+.++. ....++.++.-+.+.++++..++ ...+.+|.
T Consensus 233 ~~~~~~~~--------------l~~l~y~s~~~v~~~~d~~~~~~--~~~~~~~~ 271 (367)
T 1i8t_A 233 IDQYFDYR--------------FGALEYRSLKFETERHEFPNFQG--NAVINFTD 271 (367)
T ss_dssp HHHHTTTT--------------TCCCCEEEEEEEEEEESSSCSSS--SSEEEECC
T ss_pred HHHHHHHh--------------hCCCCCceEEEEEEEeccccCCC--CeEEEeCC
Confidence 33222211 12344555666666788875542 34456664
No 30
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.76 E-value=1.9e-17 Score=159.87 Aligned_cols=240 Identities=11% Similarity=0.087 Sum_probs=133.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccC-CCCCCcccccchhhhhhhhccCCCCCCCCCCCcccccccccccc
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPN-PFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYAS 98 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~-~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (407)
+..+||+|||||++||+||+.|+++|++|+|||++ +++||++.|+.... +... .|
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~~~~------~~~~--------~~---------- 97 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFHAKK------GEPS--------PF---------- 97 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEECCCT------TSCC--------SS----------
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeecccc------cccc--------cc----------
Confidence 34689999999999999999999999999999999 99999999876321 0000 00
Q ss_pred ccccCCCCceEEecCCCeEEeeC-cHHHHHHHhcCcccccccccc-----------------------------------
Q 015413 99 RLLSQHPRNFNLDVSGPRVLFCA-DHAVDLMLKSGASHYLEFKSI----------------------------------- 142 (407)
Q Consensus 99 ~~~~~~~~~~~idl~Gp~~~~~~-~~~~~~l~~~g~~~~~~f~~~----------------------------------- 142 (407)
....+.+++ |++++... ..+.+++.+.|+..+..+..-
T Consensus 98 -----~~~~~~~e~-G~~~~~~~~~~~~~~~~~lGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~q 171 (376)
T 2e1m_A 98 -----ADPAQYAEA-GAMRLPSFHPLTLALIDKLGLKRRLFFNVDIDPQTGNQDAPVPPVFYKSFKDGKTWTNGAPSPEF 171 (376)
T ss_dssp -----SSTTCCEES-SCCCEETTCHHHHHHHHHTTCCEEEECSSCCCTTSSBCSSCCCCCEEECSSTTCEEESSCCCTTC
T ss_pred -----cCCCcEEec-CceeecchHHHHHHHHHHcCCCcceeeccccccccccccccccccceeeeccceeEeccCCcccc
Confidence 012344666 47665433 356777888888765433221
Q ss_pred ------cceeeEccCCceeecC---CCHHHHhhh-ccC-------ChHH--HHHHHHHHHHHHhhcCC-------Ccc-c
Q 015413 143 ------DATFMLDADAKLCSVP---DSRAAIFKD-KSL-------GLME--KNQLMRFFKLVQGHLSL-------DES-E 195 (407)
Q Consensus 143 ------~~~~~~~~~g~~~~~p---~~~~~~~~~-~~l-------~~~~--k~~l~~~~~~~~~~~~~-------~~~-~ 195 (407)
...+++. +|+..... ... ..+.. -.+ ...+ .+.+.++++.+...... .+. .
T Consensus 172 ~~r~~~~~~~~~~-~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (376)
T 2e1m_A 172 KEPDKRNHTWIRT-NREQVRRAQYATDP-SSINEGFHLTGCETRLTVSDMVNQALEPVRDYYSVKQDDGTRVNKPFKEWL 249 (376)
T ss_dssp BCCCCCCCSEEEE-TTEEEEHHHHHHCT-HHHHHHTTCCGGGGGSCHHHHHHHHHHHHHHHHEEEETTTEEEECCHHHHH
T ss_pred cccccCCCceEEE-CCceecccccccCH-HHhccccCCchhhcccCHHHHHHHHHHHHHHhhhhccccccccccccchhh
Confidence 1111111 33322110 000 01110 001 1111 12222333322110000 000 0
Q ss_pred cccccccccccCCcHHHHHH-hcCCChhhHHHHHHHHHhccCCcchhhhhhchhhHHHHHHHHHHhhccccCCCcceEee
Q 015413 196 ENNVRISEEDLDSPFAEFLT-KMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYP 274 (407)
Q Consensus 196 ~~~~~~~~~~~~~s~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~s~~~~~~~~~~~~~p 274 (407)
....+...+++..|+.+||+ +.+.++..++++... .++... ..+|... .+. +. + .+.. ...++.+
T Consensus 250 ~~~~~~~~~lD~~S~~~~L~~~~g~s~~~~~~~~~~---~~~~~~---~~~s~l~---~l~-~~-~--~~~~-~~~~~~i 315 (376)
T 2e1m_A 250 AGWADVVRDFDGYSMGRFLREYAEFSDEAVEAIGTI---ENMTSR---LHLAFFH---SFL-GR-S--DIDP-RATYWEI 315 (376)
T ss_dssp HHHHHHHHHHTTCBHHHHHHHTSCCCHHHHHHHHHH---TTCTTT---TTSBHHH---HHH-HC-S--CSCT-TCCEEEE
T ss_pred ccchHHHHHHhCCCHHHHHhhccCCCHHHHHHHHhh---cCcccc---chhhHHH---HHH-Hh-h--hhcc-CCceEEE
Confidence 01112223467899999998 789999888765322 122221 1133322 221 11 1 1111 1347889
Q ss_pred cCCcchHHHHHHHHHHhcCcEEEeCCceeEEEEe
Q 015413 275 IYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTD 308 (407)
Q Consensus 275 ~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~ 308 (407)
.||++.|+++|++. .+..|++|++|++|..+
T Consensus 316 ~GG~~~l~~~l~~~---l~~~i~l~~~V~~I~~~ 346 (376)
T 2e1m_A 316 EGGSRMLPETLAKD---LRDQIVMGQRMVRLEYY 346 (376)
T ss_dssp TTCTTHHHHHHHHH---GGGTEECSEEEEEEEEC
T ss_pred CCcHHHHHHHHHHh---cCCcEEecCeEEEEEEC
Confidence 99999999998864 46789999999999986
No 31
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.74 E-value=1e-17 Score=163.25 Aligned_cols=216 Identities=13% Similarity=0.143 Sum_probs=126.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccccchhhhhhhhccCCCCCCCCCCCccccccccccccc
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (407)
|+++||+|||||++||++|..|+++|++|+|+|+++++||++.|.....
T Consensus 1 m~~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~------------------------------- 49 (384)
T 2bi7_A 1 MKSKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDARDSE------------------------------- 49 (384)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEEECTT-------------------------------
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccccccccC-------------------------------
Confidence 3458999999999999999999999999999999999999999875421
Q ss_pred cccCCCCceEE-ecCCCeEEeeC-cHHHHHHHhcCcccccccccccceeeEccCCceeecCCCHHHHhhh--ccCChHHH
Q 015413 100 LLSQHPRNFNL-DVSGPRVLFCA-DHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKD--KSLGLMEK 175 (407)
Q Consensus 100 ~~~~~~~~~~i-dl~Gp~~~~~~-~~~~~~l~~~g~~~~~~f~~~~~~~~~~~~g~~~~~p~~~~~~~~~--~~l~~~~k 175 (407)
..+.+ |. |++++... ..+.+++.+.+.. ..+. ...+++. +|+.+++|.+...+... ..+++.
T Consensus 50 ------~g~~~~~~-G~~~~~~~~~~~~~~~~~l~~~--~~~~--~~~~~~~-~g~~~~~P~~~~~~~~l~~~~~~~~-- 115 (384)
T 2bi7_A 50 ------TNVMVHVY-GPHIFHTDNETVWNYVNKHAEM--MPYV--NRVKATV-NGQVFSLPINLHTINQFFSKTCSPD-- 115 (384)
T ss_dssp ------TCCEEETT-SCCCEEESCHHHHHHHHTTSCE--EECC--CCEEEEE-TTEEEEESCCHHHHHHHTTCCCCHH--
T ss_pred ------CCceEeeC-CceEECCCCHHHHHHHHHHhhh--cccc--cceEEEE-CCEEEECCCChhHHHHHhcccCCHH--
Confidence 11223 44 57776543 4778888887742 1221 1222333 78888888875332111 112222
Q ss_pred HHHHHHHHHHHhhcCCCccccccccccccccCCcHHHHHHhcCCChhhHHHHH--HHHHhccCCcchhhhhhchhhHHHH
Q 015413 176 NQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVL--YAIAMADYDQEVSEYVLKTRDGINR 253 (407)
Q Consensus 176 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~s~~~~l~~ 253 (407)
.+.+++...... . ...+.++.+|+.+. ..+.+.+.+. +..+. +..++ .++|+... .+
T Consensus 116 -~~~~~l~~~~~~-------------~-~~~~~sl~e~~~~~-~g~~~~~~~~~p~~~~~--~~~~~--~~ls~~~~-~r 174 (384)
T 2bi7_A 116 -EARALIAEKGDS-------------T-IADPQTFEEEALRF-IGKELYEAFFKGYTIKQ--WGMQP--SELPASIL-KR 174 (384)
T ss_dssp -HHHHHHHHHSCC-------------S-CSSCCBHHHHHHHH-HCHHHHHHHTHHHHHHH--HSSCG--GGSBGGGC-CS
T ss_pred -HHHHHHHHhhhc-------------c-CCCCcCHHHHHHHh-hcHHHHHHHHHHHHHHH--hCCCH--HHhCHHHH-hc
Confidence 222333322110 0 13467999999865 4444444322 22222 22333 23554321 00
Q ss_pred HHHHHHhhccccCCCcceE-eecCCcchHHHHHHHHHHhcCcEEEeCCcee-EEE
Q 015413 254 LALYNSSIGRFQNALGALI-YPIYGQGELPQAFCRRAAVKGCLYVLRMPVI-SLL 306 (407)
Q Consensus 254 ~~~~~~s~~~~~~~~~~~~-~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~-~I~ 306 (407)
+.........+. .+.+. +|+||+++|+++|++ ..|++|++|++|+ +|.
T Consensus 175 ~~~~~~~~~~~~--~~~~~~~p~gG~~~l~~~l~~---~~g~~I~l~~~V~~~i~ 224 (384)
T 2bi7_A 175 LPVRFNYDDNYF--NHKFQGMPKCGYTQMIKSILN---HENIKVDLQREFIVEER 224 (384)
T ss_dssp CCCCSSSCCCSC--CCSEEEEETTHHHHHHHHHHC---STTEEEEESCCCCGGGG
T ss_pred cccccccccccc--cccccEEECcCHHHHHHHHHh---cCCCEEEECCeeehhhh
Confidence 000000000111 12353 999999999998865 4789999999999 773
No 32
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.74 E-value=7.5e-18 Score=163.96 Aligned_cols=273 Identities=13% Similarity=0.155 Sum_probs=156.7
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccccc-hhhhhhhhccCCCCCCCCCCCccccccccccc
Q 015413 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS-IADLTHFLNSHSTPSSVCPDPLYSDVEISNYA 97 (407)
Q Consensus 19 ~~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~t~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (407)
....+||+|||||++||+||..|+++|++|+|+|+++++||++.+.. ..|
T Consensus 26 ~~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~G----------------------------- 76 (397)
T 3hdq_A 26 ESKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDCYDDAG----------------------------- 76 (397)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCEECTTS-----------------------------
T ss_pred cCCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccceeeccCC-----------------------------
Confidence 34579999999999999999999999999999999999999998864 222
Q ss_pred cccccCCCCceEE-ecCCCeEEeeC-cHHHHHHHhcCcccccccccccceeeEccCCceeecCCCHHHHhh--hccCChH
Q 015413 98 SRLLSQHPRNFNL-DVSGPRVLFCA-DHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFK--DKSLGLM 173 (407)
Q Consensus 98 ~~~~~~~~~~~~i-dl~Gp~~~~~~-~~~~~~l~~~g~~~~~~f~~~~~~~~~~~~g~~~~~p~~~~~~~~--~~~l~~~ 173 (407)
+.+ |. |+++++.. ..+.+++.+.+.. ..+ ....+.+. +|+++++|.+...+.. ...+++.
T Consensus 77 ----------~~~~~~-G~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~-~g~l~~lP~~~~~~~~l~~~~~~~~ 140 (397)
T 3hdq_A 77 ----------VLIHPY-GPHIFHTNSKDVFEYLSRFTEW--RPY--QHRVLASV-DGQLLPIPINLDTVNRLYGLNLTSF 140 (397)
T ss_dssp ----------CEECTT-SCCCCEESCHHHHHHHHTSCCE--EEC--CCBEEEEE-TTEEEEESCCHHHHHHHHTCCCCHH
T ss_pred ----------ceEeec-CCcccCCChHHHHHHHHHhhhc--ccc--cccceEEE-CCEEEEcCCChHHHHHhhccCCCHH
Confidence 112 44 57766544 4677888877732 111 12233443 8999999987533211 1123332
Q ss_pred HHHHHHHHHHHHHhhcCCCccccccccccccccCCcHHHHHHhcCCChhhHH-HHH-HHHHhccCCcchhhhhhchhhHH
Q 015413 174 EKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKS-IVL-YAIAMADYDQEVSEYVLKTRDGI 251 (407)
Q Consensus 174 ~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~s~~~~l 251 (407)
. +..++.. .. .....+.++.+|+.+. +.+.+.+ ++. +.... +..++ +++|+.. +
T Consensus 141 ~---~~~~l~~-~~--------------~~~~~~~s~~e~~~~~-~G~~~~e~~~~py~~k~--~~~~~--~~Lsa~~-~ 196 (397)
T 3hdq_A 141 Q---VEEFFAS-VA--------------EKVEQVRTSEDVVVSK-VGRDLYNKFFRGYTRKQ--WGLDP--SELDASV-T 196 (397)
T ss_dssp H---HHHHHHH-HC--------------CCCSSCCBHHHHHHHH-HHHHHHHHHTHHHHHHH--HSSCG--GGSBTTT-G
T ss_pred H---HHHHHhh-cc--------------cCCCCCcCHHHHHHHh-cCHHHHHHHHHHHhCch--hCCCH--HHHHHHH-H
Confidence 2 2222221 01 1123567999998743 2233333 222 12222 23343 3477642 1
Q ss_pred HHHHHHHHhhccccCC--Ccce-EeecCCcchHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcC
Q 015413 252 NRLALYNSSIGRFQNA--LGAL-IYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSH 328 (407)
Q Consensus 252 ~~~~~~~~s~~~~~~~--~~~~-~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad 328 (407)
.++. ....+.+. .+.+ .+|+||.++|.++|+ +..|++|+||++|+++ +.++.+|
T Consensus 197 ~Rvp----~~~~~d~~yf~~~~qg~P~gGy~~l~e~l~---~~~g~~V~l~~~v~~~----------------~~~~~~d 253 (397)
T 3hdq_A 197 ARVP----TRTNRDNRYFADTYQAMPLHGYTRMFQNML---SSPNIKVMLNTDYREI----------------ADFIPFQ 253 (397)
T ss_dssp GGSC----CCSSCCCBSCCCSEEEEETTCHHHHHHHHT---CSTTEEEEESCCGGGT----------------TTTSCEE
T ss_pred HhcC----cccccCccchhhhheeccCCCHHHHHHHHH---hccCCEEEECCeEEec----------------cccccCC
Confidence 1110 00001100 1224 479999999998775 4579999999999843 2235588
Q ss_pred EEEE-CCCCCCCCCCccchhhhhhhhhhhcccCCCceEEEEEEEeCCCCCCCCCcEEEEeCCCCCCceEEEEeec
Q 015413 329 KLVL-DPSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPDLSNFLVIFPPRCKIDSWYFCLCY 402 (407)
Q Consensus 329 ~VI~-~p~~~~~~~~~~~~p~lp~~~~~~~~~~~~g~~~k~i~i~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~ 402 (407)
+||. .|...+-.. .....++.++.-....++.+... +.+.|-+|... .++.++.|
T Consensus 254 ~vI~T~P~d~~~~~--------------~~g~L~yrsl~~~~~~~~~~~~~--~~~~vn~~d~~---p~tRi~e~ 309 (397)
T 3hdq_A 254 HMIYTGPVDAFFDF--------------CYGKLPYRSLEFRHETHDTEQLL--PTGTVNYPNDY---AYTRVSEF 309 (397)
T ss_dssp EEEECSCHHHHTTT--------------TTCCCCEEEEEEEEEEESSSCSC--SSSEEECSSSS---SCSEEEEH
T ss_pred EEEEcCCHHHHHHH--------------hcCCCCCceEEEEEEEeccccCC--CCeEEEeCCCC---cceEEEee
Confidence 9995 343222110 01234466666667778866544 34456677432 44444443
No 33
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.72 E-value=1.3e-16 Score=152.96 Aligned_cols=101 Identities=11% Similarity=-0.010 Sum_probs=81.0
Q ss_pred eEeecCCcchHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE-CCCCCCCCCCccchhhh
Q 015413 271 LIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL-DPSFTVPGSLASSHQQL 349 (407)
Q Consensus 271 ~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~-~p~~~~~~~~~~~~p~l 349 (407)
.+.+.+|++.+.++|++. .|++|+++++|++|..+ +++ +.|++.+|++++||+||+ .|.....++...+.|+|
T Consensus 104 ~~~~~~g~~~l~~~l~~~---~g~~i~~~~~V~~i~~~--~~~-~~v~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l 177 (342)
T 3qj4_A 104 NFVAPQGISSIIKHYLKE---SGAEVYFRHRVTQINLR--DDK-WEVSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLI 177 (342)
T ss_dssp EEECTTCTTHHHHHHHHH---HTCEEESSCCEEEEEEC--SSS-EEEEESSSCCEEESEEEECSCHHHHTTCBSTHHHHS
T ss_pred ceecCCCHHHHHHHHHHh---cCCEEEeCCEEEEEEEc--CCE-EEEEECCCCEEEcCEEEECCCHHHHHHHhccccccc
Confidence 346789999999988764 38999999999999986 444 468888888899999995 56555566654556788
Q ss_pred hhhhhhhcccCCCceEEEEEEEeCCCCC
Q 015413 350 QESFQAFSLSDNKGKVARGICITRSSLK 377 (407)
Q Consensus 350 p~~~~~~~~~~~~g~~~k~i~i~~~p~~ 377 (407)
|+...+..+..+|+.+.++.+.|++|++
T Consensus 178 ~~~~~~~l~~~~~~~~~~v~l~~~~~~~ 205 (342)
T 3qj4_A 178 SECQRQQLEAVSYSSRYALGLFYEAGTK 205 (342)
T ss_dssp CHHHHHHHHTCCBCCEEEEEEECSSCC-
T ss_pred CHHHHHHHhcCCccccEEEEEEECCCCc
Confidence 8887777788899999999999999865
No 34
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.44 E-value=2.7e-12 Score=122.09 Aligned_cols=94 Identities=10% Similarity=0.025 Sum_probs=67.0
Q ss_pred EeecCCcchHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEE-cCEEE-ECCCCCCCCCCccchhhh
Q 015413 272 IYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDIL-SHKLV-LDPSFTVPGSLASSHQQL 349 (407)
Q Consensus 272 ~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~-Ad~VI-~~p~~~~~~~~~~~~p~l 349 (407)
+....|++.+.+++++ |.+|+++++|++|..+ ++. +.|++.+|+.+. ||.|| ++|.....++. .+.|++
T Consensus 103 ~~~~~~~~~l~~~l~~-----g~~i~~~~~v~~i~~~--~~~-~~v~~~~g~~~~~a~~vV~a~g~~~~~~~~-~~~~~l 173 (336)
T 1yvv_A 103 WVGKPGMSAITRAMRG-----DMPVSFSCRITEVFRG--EEH-WNLLDAEGQNHGPFSHVIIATPAPQASTLL-AAAPKL 173 (336)
T ss_dssp EEESSCTHHHHHHHHT-----TCCEECSCCEEEEEEC--SSC-EEEEETTSCEEEEESEEEECSCHHHHGGGG-TTCHHH
T ss_pred EEcCccHHHHHHHHHc-----cCcEEecCEEEEEEEe--CCE-EEEEeCCCcCccccCEEEEcCCHHHHHHhh-ccCHHH
Confidence 3456788888887654 7899999999999986 444 468888888764 99999 45655434432 234444
Q ss_pred hhhhhhhcccCCCceEEEEEEEeCCCCCC
Q 015413 350 QESFQAFSLSDNKGKVARGICITRSSLKP 378 (407)
Q Consensus 350 p~~~~~~~~~~~~g~~~k~i~i~~~p~~~ 378 (407)
+ ...+...++.+.++.+.|++|++.
T Consensus 174 ~----~~~~~~~~~~~~~~~~~~~~~~~~ 198 (336)
T 1yvv_A 174 A----SVVAGVKMDPTWAVALAFETPLQT 198 (336)
T ss_dssp H----HHHTTCCEEEEEEEEEEESSCCSC
T ss_pred H----HHHhhcCccceeEEEEEecCCCCC
Confidence 4 223455688999999999999874
No 35
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.32 E-value=8.1e-12 Score=120.00 Aligned_cols=53 Identities=15% Similarity=0.144 Sum_probs=43.9
Q ss_pred cchHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCC--cEEEcCEEEE
Q 015413 278 QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASG--QDILSHKLVL 332 (407)
Q Consensus 278 ~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G--~~i~Ad~VI~ 332 (407)
...+.++|.+.+++.|++|+++++|++|..+ ++..+.|++.+| .+++||+||+
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~--~~~~~~v~~~~g~~~~~~a~~VV~ 203 (369)
T 3dme_A 149 SHALMLAYQGDAESDGAQLVFHTPLIAGRVR--PEGGFELDFGGAEPMTLSCRVLIN 203 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEC--TTSSEEEEECTTSCEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCEEECCCEEEEEEEc--CCceEEEEECCCceeEEEeCEEEE
Confidence 3578899999999999999999999999986 444346887777 4799999994
No 36
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.30 E-value=5.7e-11 Score=117.37 Aligned_cols=60 Identities=22% Similarity=0.223 Sum_probs=50.8
Q ss_pred eEeecC-C---cchHHHHHHHHHHhcCcEEEeCC---ceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 015413 271 LIYPIY-G---QGELPQAFCRRAAVKGCLYVLRM---PVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (407)
Q Consensus 271 ~~~p~g-G---~~~l~~al~r~~~~~Gg~i~l~~---~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (407)
++.+.+ | ...+.++|.+.++..|++|++++ +|++|..+ ++++++|++.+|++++||+||+
T Consensus 149 ~~~~~~~g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~--~~~v~gV~t~~G~~i~Ad~VV~ 215 (438)
T 3dje_A 149 YFARSGAGWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFE--NNDVKGAVTADGKIWRAERTFL 215 (438)
T ss_dssp EEESSSCEEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEE--TTEEEEEEETTTEEEECSEEEE
T ss_pred EEeCCCCEEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEec--CCeEEEEEECCCCEEECCEEEE
Confidence 445555 4 45788999999999999999999 99999987 7788889998998899999994
No 37
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.24 E-value=1.2e-10 Score=121.41 Aligned_cols=59 Identities=19% Similarity=0.206 Sum_probs=49.1
Q ss_pred eEeecCCc---chHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 015413 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (407)
Q Consensus 271 ~~~p~gG~---~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (407)
.+++.+|. ..+.++|.+.++..|++|+++++|++|..+ +++ ++|++.+|++++||+||+
T Consensus 406 ~~~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~--~~~-v~V~t~~G~~i~Ad~VVl 467 (676)
T 3ps9_A 406 ITYPQGGWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRK--DDC-WLLNFAGDQQATHSVVVL 467 (676)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEE--TTE-EEEEETTSCEEEESEEEE
T ss_pred EEecCCeeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEe--CCe-EEEEECCCCEEECCEEEE
Confidence 44565553 678899999999999999999999999987 555 588888888999999994
No 38
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.23 E-value=1.2e-10 Score=112.32 Aligned_cols=58 Identities=17% Similarity=0.127 Sum_probs=47.5
Q ss_pred eEeecCC---cchHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 015413 271 LIYPIYG---QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (407)
Q Consensus 271 ~~~p~gG---~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (407)
.+++.+| ...+.++|.+.+++.|++|+++++|++|..+ +++ ++|++.+| +++||+||+
T Consensus 143 ~~~~~~~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~--~~~-~~V~t~~g-~i~a~~VV~ 203 (381)
T 3nyc_A 143 TYDPTGADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRV--DGA-WEVRCDAG-SYRAAVLVN 203 (381)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEE--TTE-EEEECSSE-EEEESEEEE
T ss_pred EEcCCCceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEe--CCe-EEEEeCCC-EEEcCEEEE
Confidence 4455555 2578899999999999999999999999987 555 68887766 899999995
No 39
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.22 E-value=4.6e-10 Score=113.24 Aligned_cols=42 Identities=26% Similarity=0.383 Sum_probs=39.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCccc
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (407)
.++||||||+|++||+||+.|+++|++|+||||.+.+||.+.
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG~s~ 81 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGGATA 81 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGG
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcch
Confidence 469999999999999999999999999999999999998753
No 40
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.20 E-value=9.4e-12 Score=113.29 Aligned_cols=46 Identities=26% Similarity=0.325 Sum_probs=42.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccccchhh
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIAD 68 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~t~~~~~ 68 (407)
+||+|||||++||+||+.|+++|++|+||||++++||++.+....+
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~~~~~~ 48 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDA 48 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETT
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccccccCC
Confidence 8999999999999999999999999999999999999998866543
No 41
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.15 E-value=1.1e-09 Score=110.81 Aligned_cols=53 Identities=23% Similarity=0.269 Sum_probs=45.7
Q ss_pred chHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 015413 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (407)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~ 333 (407)
..+.++|.+.++..|++|+++++|++|..+ ++++++|++.+|++++||.||+.
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~--~~~v~gV~l~~G~~i~Ad~VVlA 272 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHME--DGQITGVTLSNGEEIKSRHVVLA 272 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEES--SSBEEEEEETTSCEEECSCEEEC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEe--CCEEEEEEECCCCEEECCEEEEC
Confidence 456677778888899999999999999986 67788899999999999999954
No 42
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.15 E-value=4.3e-10 Score=117.54 Aligned_cols=59 Identities=17% Similarity=0.180 Sum_probs=48.2
Q ss_pred eEeecCCc---chHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCc-EEEcCEEEE
Q 015413 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ-DILSHKLVL 332 (407)
Q Consensus 271 ~~~p~gG~---~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~-~i~Ad~VI~ 332 (407)
.+++.+|. ..+.++|.+.++..|++|+++++|++|+.+ +++ +.|++.+|+ +++||+||+
T Consensus 401 ~~~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~--~~~-v~V~t~~G~~~i~Ad~VVl 463 (689)
T 3pvc_A 401 IHYPAGGWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRI--DSQ-WQLTFGQSQAAKHHATVIL 463 (689)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEC--SSS-EEEEEC-CCCCEEESEEEE
T ss_pred EEecCCeEECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEe--CCe-EEEEeCCCcEEEECCEEEE
Confidence 55666664 678899999999999999999999999986 555 578888887 899999994
No 43
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.14 E-value=1.6e-10 Score=113.37 Aligned_cols=58 Identities=10% Similarity=0.113 Sum_probs=48.1
Q ss_pred eEeecCCcchHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 015413 271 LIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (407)
Q Consensus 271 ~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (407)
..++......+.++|.+.+++.|++|+++++|++|..+ ++. +.|++.+| +++||.||+
T Consensus 124 ~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~--~~~-~~V~~~~g-~i~ad~VIl 181 (417)
T 3v76_A 124 QLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERT--ASG-FRVTTSAG-TVDAASLVV 181 (417)
T ss_dssp EEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEE--TTE-EEEEETTE-EEEESEEEE
T ss_pred EEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEe--CCE-EEEEECCc-EEEeeEEEE
Confidence 34566667789999999999999999999999999886 444 57887777 899999994
No 44
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.13 E-value=3.1e-09 Score=108.61 Aligned_cols=53 Identities=17% Similarity=0.243 Sum_probs=44.3
Q ss_pred chHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeC--CCc--EEEcCEEEE
Q 015413 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLA--SGQ--DILSHKLVL 332 (407)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~--~G~--~i~Ad~VI~ 332 (407)
..+.+.|.+.+++.|++|+++++|++|..+ +++++++|++. +|+ +++||.||+
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~-~~g~v~Gv~~~~~~g~~~~i~a~~VVl 311 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKD-DKGTVKGILVKGMYKGYYWVKADAVIL 311 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEC-TTSCEEEEEEEETTTEEEEEECSEEEE
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEc-CCCeEEEEEEEeCCCcEEEEECCeEEE
Confidence 578899999999999999999999999986 23888888765 575 689999994
No 45
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.13 E-value=2.2e-09 Score=109.60 Aligned_cols=59 Identities=22% Similarity=0.193 Sum_probs=47.4
Q ss_pred EeecCC---cchHHHHHHHHHHhcCcEEEeCCceeEEEEecCC-CcEEEEEeC--CCc--EEEcCEEEE
Q 015413 272 IYPIYG---QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNS-GSYKGVRLA--SGQ--DILSHKLVL 332 (407)
Q Consensus 272 ~~p~gG---~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~-g~~~gV~~~--~G~--~i~Ad~VI~ 332 (407)
.++.+| ...+.+.|.+.+++.|++|+++++|++|..+ + +++++|++. +|+ +++||.||+
T Consensus 240 ~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~--~~g~v~Gv~~~~~~g~~~~i~A~~VVl 306 (566)
T 1qo8_A 240 HRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVN--DDHSVVGAVVHGKHTGYYMIGAKSVVL 306 (566)
T ss_dssp EECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEEC--TTSBEEEEEEEETTTEEEEEEEEEEEE
T ss_pred eecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEC--CCCcEEEEEEEeCCCcEEEEEcCEEEE
Confidence 345444 3568899999999999999999999999986 5 888888765 675 689999884
No 46
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.13 E-value=2.8e-09 Score=103.75 Aligned_cols=59 Identities=25% Similarity=0.354 Sum_probs=48.9
Q ss_pred eEeecCCcc---hHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 015413 271 LIYPIYGQG---ELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (407)
Q Consensus 271 ~~~p~gG~~---~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (407)
.+++.+|.- .+.++|.+.+++.|++++++++|++|..+ ++++++|++.+| +++||.||.
T Consensus 163 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~--~~~~~~v~~~~g-~~~a~~vV~ 224 (405)
T 2gag_B 163 TWQPRAGIAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKD--GEKVTGVKTTRG-TIHAGKVAL 224 (405)
T ss_dssp EEETTCBBCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEES--SSBEEEEEETTC-CEEEEEEEE
T ss_pred EEeCCCccCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEe--CCEEEEEEeCCc-eEECCEEEE
Confidence 455666654 78888999899999999999999999886 677778888777 799999994
No 47
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.12 E-value=9.8e-10 Score=108.93 Aligned_cols=60 Identities=20% Similarity=0.319 Sum_probs=50.0
Q ss_pred eEeecC-CcchHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 015413 271 LIYPIY-GQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (407)
Q Consensus 271 ~~~p~g-G~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (407)
..+|.. ....+.++|.+.++..|++|+++++|++|..+ ++++++|++.+|++++||.||+
T Consensus 125 ~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~--~~~v~~V~~~~G~~i~Ad~VVl 185 (447)
T 2i0z_A 125 RMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYE--NGQTKAVILQTGEVLETNHVVI 185 (447)
T ss_dssp EEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE--TTEEEEEEETTCCEEECSCEEE
T ss_pred EEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEec--CCcEEEEEECCCCEEECCEEEE
Confidence 345543 35688899999999999999999999999986 6777889988888899999994
No 48
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.09 E-value=1.9e-09 Score=104.30 Aligned_cols=59 Identities=25% Similarity=0.240 Sum_probs=47.4
Q ss_pred eEeecCC---cchHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 015413 271 LIYPIYG---QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (407)
Q Consensus 271 ~~~p~gG---~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (407)
.+.+..| ...+.++|.+.+++.|++|+++++|++|..+ ++++++|++.+| +++||+||.
T Consensus 138 ~~~~~~~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~--~~~v~gv~~~~g-~i~a~~VV~ 199 (382)
T 1y56_B 138 SWNPTDGKADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIE--NNEIKGVKTNKG-IIKTGIVVN 199 (382)
T ss_dssp EEETTCCEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEES--SSBEEEEEETTE-EEECSEEEE
T ss_pred EEcCCCeeECHHHHHHHHHHHHHHCCCEEECCceEEEEEEE--CCEEEEEEECCc-EEECCEEEE
Confidence 3344444 3577888989889999999999999999986 677777887777 899999994
No 49
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.00 E-value=4.7e-09 Score=112.00 Aligned_cols=59 Identities=25% Similarity=0.296 Sum_probs=48.5
Q ss_pred eEeecCCc---chHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 015413 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (407)
Q Consensus 271 ~~~p~gG~---~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (407)
.+.+..|. ..+.++|.+.+++.|++|+++++|++|..+ ++++++|++.+| +++||+||.
T Consensus 140 ~~~~~~g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~--~~~v~~V~t~~G-~i~Ad~VV~ 201 (830)
T 1pj5_A 140 LHVPSDGLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQS--GGRVTGVQTADG-VIPADIVVS 201 (830)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE--TTEEEEEEETTE-EEECSEEEE
T ss_pred EEECCCceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEe--CCEEEEEEECCc-EEECCEEEE
Confidence 44555553 378899999999999999999999999986 677778887766 799999994
No 50
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.98 E-value=2.5e-08 Score=101.86 Aligned_cols=52 Identities=23% Similarity=0.319 Sum_probs=43.5
Q ss_pred chHHHHHHHHHHhcCcEEEeCCceeEEEEecCC-CcEEEEEeC--CCc--EEEcCEEEE
Q 015413 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNS-GSYKGVRLA--SGQ--DILSHKLVL 332 (407)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~-g~~~gV~~~--~G~--~i~Ad~VI~ 332 (407)
..+.+.|.+.+++.|++|+++++|++|..+ + +++++|++. +|+ +++||.||+
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~--~~g~v~GV~~~~~~G~~~~i~A~~VVl 311 (572)
T 1d4d_A 255 AHVAQVLWDNAVKRGTDIRLNSRVVRILED--ASGKVTGVLVKGEYTGYYVIKADAVVI 311 (572)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEC----CCEEEEEEEETTTEEEEEECSEEEE
T ss_pred HHHHHHHHHHHHHcCCeEEecCEEEEEEEC--CCCeEEEEEEEeCCCcEEEEEcCEEEE
Confidence 478899999999999999999999999886 5 888888765 565 589999994
No 51
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.95 E-value=3.8e-10 Score=109.16 Aligned_cols=42 Identities=26% Similarity=0.403 Sum_probs=38.8
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcc
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~ 61 (407)
|++|||||||||++||+||+.|+++|++|+|+|+++.+|...
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~ 43 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPV 43 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCC
Confidence 678999999999999999999999999999999999887543
No 52
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.77 E-value=3.9e-09 Score=100.06 Aligned_cols=42 Identities=14% Similarity=0.125 Sum_probs=38.5
Q ss_pred cccEEEECCChhHHHHHHHHhh--CCCeEEEEccCCCCCCcccc
Q 015413 22 AFDLIVIGTGLPESVISAAASA--SGKSVLHLDPNPFYGSHFSS 63 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~--~G~~VlvlE~~~~~GG~~~t 63 (407)
++||+|||||.+||+||++|++ +|++|+|+|+++++||.+..
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~ 108 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWL 108 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTC
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEe
Confidence 5799999999999999999974 59999999999999998764
No 53
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.74 E-value=6.2e-09 Score=97.54 Aligned_cols=42 Identities=21% Similarity=0.177 Sum_probs=35.5
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcc
Q 015413 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (407)
Q Consensus 19 ~~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~ 61 (407)
.|+.|||||||||.+||+||..|+|+|++|+|+|++ .+||..
T Consensus 3 ~M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~-~~gg~~ 44 (304)
T 4fk1_A 3 AMKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNN-TNRNRV 44 (304)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECS-CCGGGG
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCCee
Confidence 478899999999999999999999999999999997 456643
No 54
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.73 E-value=5.7e-09 Score=98.77 Aligned_cols=60 Identities=8% Similarity=0.083 Sum_probs=39.5
Q ss_pred CCCCCCCCCCCCCCCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEEcc----CCCCCCcccc
Q 015413 4 NESESELPVPPYPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDP----NPFYGSHFSS 63 (407)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~----~~~~GG~~~t 63 (407)
|-...+++.|+-++....++||+|||||++||+||..|+++|++|+|+|+ +..+||.+..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~ 67 (338)
T 3itj_A 4 SHHHHHHSSGLVPRGSHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTT 67 (338)
T ss_dssp -----------------CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGG
T ss_pred cccccccccCCCCCCCCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCccccc
Confidence 33445555555555555679999999999999999999999999999999 4589997765
No 55
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.67 E-value=1.4e-08 Score=95.29 Aligned_cols=40 Identities=20% Similarity=0.385 Sum_probs=36.7
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCccc
Q 015413 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (407)
+|||||||||.+||+||..|++.|++|+|+|++ .+||.+.
T Consensus 6 ~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~-~~gG~~~ 45 (312)
T 4gcm_A 6 DFDIAIIGAGPAGMTAAVYASRANLKTVMIERG-IPGGQMA 45 (312)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGG
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC-CCCCeee
Confidence 699999999999999999999999999999985 6888664
No 56
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.66 E-value=1.3e-07 Score=92.58 Aligned_cols=55 Identities=15% Similarity=0.175 Sum_probs=47.8
Q ss_pred cchHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECC
Q 015413 278 QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDP 334 (407)
Q Consensus 278 ~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~p 334 (407)
..++.+.+.+.+++.|.++++++.|++|..+ ++++.+|++++|+++.||.||+..
T Consensus 193 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v~~v~l~dG~~i~aD~Vv~a~ 247 (415)
T 3lxd_A 193 GEALSEFYQAEHRAHGVDLRTGAAMDCIEGD--GTKVTGVRMQDGSVIPADIVIVGI 247 (415)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEES--SSBEEEEEESSSCEEECSEEEECS
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEec--CCcEEEEEeCCCCEEEcCEEEECC
Confidence 4677888888889999999999999999875 677778999999999999999543
No 57
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.64 E-value=1.6e-08 Score=98.00 Aligned_cols=42 Identities=26% Similarity=0.403 Sum_probs=38.4
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcc
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~ 61 (407)
|+++||||||||++||++|+.|+++|++|+|+|+++.+|+..
T Consensus 2 m~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~ 43 (397)
T 3cgv_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPV 43 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSC
T ss_pred CccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCc
Confidence 457999999999999999999999999999999999887643
No 58
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.64 E-value=1.9e-08 Score=94.29 Aligned_cols=36 Identities=14% Similarity=0.162 Sum_probs=33.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (407)
+.|||||||||.+||+||..|++.|++|+|+|++..
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~ 38 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMA 38 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSG
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 469999999999999999999999999999999753
No 59
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.63 E-value=2.2e-08 Score=96.65 Aligned_cols=58 Identities=17% Similarity=0.213 Sum_probs=46.8
Q ss_pred eEeecCCc---chHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 015413 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (407)
Q Consensus 271 ~~~p~gG~---~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (407)
++++.+|. ..+.++|.+.+++.|++|+++++|++|..+ ++++ +|++.+| +++||.||.
T Consensus 153 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~--~~~~-~v~~~~g-~~~a~~vV~ 213 (382)
T 1ryi_A 153 SFIQDDVHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERD--GEAL-FIKTPSG-DVWANHVVV 213 (382)
T ss_dssp EEETTCCBCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECS--SSSE-EEEETTE-EEEEEEEEE
T ss_pred EEeCCCeEEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEE--CCEE-EEEcCCc-eEEcCEEEE
Confidence 44555554 568899999999999999999999999875 5555 7877666 899999994
No 60
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.62 E-value=2e-08 Score=97.98 Aligned_cols=53 Identities=15% Similarity=0.026 Sum_probs=34.9
Q ss_pred CCCCCCCCCCCCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 015413 7 ESELPVPPYPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (407)
Q Consensus 7 ~~~~~~~~~~~~~~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (407)
+-+++-++-++-.++.+||||||||++||++|+.|+++|++|+|+|+++.++.
T Consensus 8 ~~~~~~~~~~~~~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~ 60 (407)
T 3rp8_A 8 HHHHHSSGENLYFQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKP 60 (407)
T ss_dssp ---------------CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC--
T ss_pred cccccCCCCcccCCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCC
Confidence 33444444455556679999999999999999999999999999999987653
No 61
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.61 E-value=9.3e-07 Score=86.16 Aligned_cols=56 Identities=16% Similarity=0.219 Sum_probs=48.4
Q ss_pred CcchHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECC
Q 015413 277 GQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDP 334 (407)
Q Consensus 277 G~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~p 334 (407)
...++.+.+.+.+++.|.++++++.|++|..+ ++++.+|++++|+++.||.||+..
T Consensus 182 ~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v~~V~~~dG~~i~aD~Vv~a~ 237 (404)
T 3fg2_P 182 VTPEISSYFHDRHSGAGIRMHYGVRATEIAAE--GDRVTGVVLSDGNTLPCDLVVVGV 237 (404)
T ss_dssp SCHHHHHHHHHHHHHTTCEEECSCCEEEEEEE--TTEEEEEEETTSCEEECSEEEECC
T ss_pred cCHHHHHHHHHHHHhCCcEEEECCEEEEEEec--CCcEEEEEeCCCCEEEcCEEEECc
Confidence 35678888888889999999999999999876 677788999999999999999543
No 62
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.60 E-value=1.7e-08 Score=98.53 Aligned_cols=43 Identities=26% Similarity=0.277 Sum_probs=39.7
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCccc
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (407)
|.++||||||||.+||+||+.|+++|.+|+|+|+++.+|+.+.
T Consensus 2 M~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~ 44 (401)
T 2gqf_A 2 SQYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKIL 44 (401)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHH
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcE
Confidence 5679999999999999999999999999999999999987653
No 63
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.60 E-value=2.8e-08 Score=94.54 Aligned_cols=44 Identities=25% Similarity=0.285 Sum_probs=41.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~t 63 (407)
|+++||+|||||++||++|..|++.|++|+|+|+++.+||.+..
T Consensus 1 m~~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~ 44 (357)
T 4a9w_A 1 MDSVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQH 44 (357)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGG
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccC
Confidence 45799999999999999999999999999999999999998764
No 64
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.58 E-value=2.2e-08 Score=100.38 Aligned_cols=52 Identities=29% Similarity=0.344 Sum_probs=39.0
Q ss_pred CCCCCCCCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 015413 11 PVPPYPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (407)
Q Consensus 11 ~~~~~~~~~~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~t 63 (407)
+-..++.. |.+|||+|||||.+||+||..|++.|++|+|+|+++.+||.+..
T Consensus 15 ~~n~~~~~-m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~ 66 (491)
T 3urh_A 15 TENLYFQS-MMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLN 66 (491)
T ss_dssp ------------CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHH
T ss_pred cCCcchhh-cccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCcccc
Confidence 33344443 34699999999999999999999999999999999999997653
No 65
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.58 E-value=4e-08 Score=100.49 Aligned_cols=53 Identities=17% Similarity=0.075 Sum_probs=38.0
Q ss_pred CCCCCCCCCCCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCc
Q 015413 8 SELPVPPYPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (407)
Q Consensus 8 ~~~~~~~~~~~~~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~ 60 (407)
+++.-|+-...+|..+||||||||++||++|+.|+++|++|+|+|+++..++.
T Consensus 9 ~~~~~~~~~~~~M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~ 61 (591)
T 3i3l_A 9 HHSSGLVPRGSHMTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYR 61 (591)
T ss_dssp -----------CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCC
T ss_pred CCCCCCCCCcCcCCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCc
Confidence 33344444445567799999999999999999999999999999999766543
No 66
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.58 E-value=3.9e-08 Score=95.57 Aligned_cols=58 Identities=22% Similarity=0.219 Sum_probs=44.4
Q ss_pred eEeecCCc---chHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 015413 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (407)
Q Consensus 271 ~~~p~gG~---~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (407)
.+.+.+|. ..+.++|.+.+++.|++|+++++|++|..+ ++. +.|++.+| +++||.||.
T Consensus 142 ~~~~~~g~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~--~~~-v~v~t~~g-~i~a~~VV~ 202 (397)
T 2oln_A 142 FLQPDGGTIDVRGTLAALFTLAQAAGATLRAGETVTELVPD--ADG-VSVTTDRG-TYRAGKVVL 202 (397)
T ss_dssp EEETTCEEEEHHHHHHHHHHHHHHTTCEEEESCCEEEEEEE--TTE-EEEEESSC-EEEEEEEEE
T ss_pred EEcCCCCEEcHHHHHHHHHHHHHHcCCEEECCCEEEEEEEc--CCe-EEEEECCC-EEEcCEEEE
Confidence 44455543 467788888888899999999999999986 554 45776554 799999994
No 67
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.57 E-value=4.9e-08 Score=101.96 Aligned_cols=61 Identities=15% Similarity=0.185 Sum_probs=48.9
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 015413 2 TGNESESELPVPPYPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (407)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~t 63 (407)
+|.|.+..|..++.++ ....+||||||||.+||+||..|++.|++|+|+|+++++||.+..
T Consensus 372 ~g~e~~~~~~~~~~~~-~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~ 432 (690)
T 3k30_A 372 MGEEWRRGWHPERIRA-KESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQ 432 (690)
T ss_dssp TTTTTTTCCCSSCCCC-CSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHH
T ss_pred cCcccccccCccccCc-ccccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeee
Confidence 3555555554434444 345689999999999999999999999999999999999998654
No 68
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.56 E-value=8e-08 Score=90.41 Aligned_cols=41 Identities=15% Similarity=0.149 Sum_probs=37.9
Q ss_pred cccEEEECCChhHHHHHHHHhhC--CCeEEEEccCCCCCCccc
Q 015413 22 AFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYGSHFS 62 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~--G~~VlvlE~~~~~GG~~~ 62 (407)
++||+|||+|++||+||..|+++ |++|+|+|+++.+||.++
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~ 107 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSW 107 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTT
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcccccccc
Confidence 46999999999999999999999 999999999999998554
No 69
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.55 E-value=4.2e-08 Score=91.06 Aligned_cols=41 Identities=17% Similarity=0.191 Sum_probs=37.8
Q ss_pred CcccEEEECCChhHHHHHHHHhhC-CCeEEEEccCCCCCCcc
Q 015413 21 TAFDLIVIGTGLPESVISAAASAS-GKSVLHLDPNPFYGSHF 61 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~-G~~VlvlE~~~~~GG~~ 61 (407)
.++||||||||++||+||..|++. |.+|+|+|+++.+||.+
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~ 79 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGA 79 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTT
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCce
Confidence 358999999999999999999997 99999999999998754
No 70
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.54 E-value=3.8e-08 Score=93.20 Aligned_cols=43 Identities=21% Similarity=0.344 Sum_probs=40.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCccc
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (407)
+.++||+|||||++||+||..|++.|++|+|+|+++.+||.+.
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~ 45 (335)
T 2zbw_A 3 ADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLT 45 (335)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHH
T ss_pred CCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeee
Confidence 4579999999999999999999999999999999999998764
No 71
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.54 E-value=4.5e-08 Score=99.66 Aligned_cols=60 Identities=27% Similarity=0.356 Sum_probs=47.7
Q ss_pred eEeecCC--cchHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCC---C--cEEEcCEEEE
Q 015413 271 LIYPIYG--QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLAS---G--QDILSHKLVL 332 (407)
Q Consensus 271 ~~~p~gG--~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~---G--~~i~Ad~VI~ 332 (407)
+.|+.+- ...+..+|++.++..|++|+++++|++|..+ ++++++|++.+ | .+++||.||.
T Consensus 160 ~~~~dg~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~--~g~v~gV~~~d~~tg~~~~i~A~~VV~ 226 (561)
T 3da1_A 160 GIYVEYRTDDARLTLEIMKEAVARGAVALNYMKVESFIYD--QGKVVGVVAKDRLTDTTHTIYAKKVVN 226 (561)
T ss_dssp EEEEEEECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEE--TTEEEEEEEEETTTCCEEEEEEEEEEE
T ss_pred EEecCceEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEc--CCeEEEEEEEEcCCCceEEEECCEEEE
Confidence 4455442 3578889999999999999999999999987 77878887654 3 4689999994
No 72
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.53 E-value=3.5e-08 Score=98.77 Aligned_cols=51 Identities=22% Similarity=0.287 Sum_probs=43.2
Q ss_pred chHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 015413 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (407)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (407)
.++.+.+.+.+++.|.+++++++|++|..+ +++ +.|++.+|+++.||.||+
T Consensus 232 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~--~~~-v~v~~~~g~~i~aD~Vi~ 282 (484)
T 3o0h_A 232 YDLRQLLNDAMVAKGISIIYEATVSQVQST--ENC-YNVVLTNGQTICADRVML 282 (484)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEEC--SSS-EEEEETTSCEEEESEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEee--CCE-EEEEECCCcEEEcCEEEE
Confidence 467788888888899999999999999875 455 478888999999999994
No 73
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.53 E-value=3.7e-08 Score=98.03 Aligned_cols=43 Identities=23% Similarity=0.260 Sum_probs=40.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~t 63 (407)
.+|||||||||.+||+||..|++.|++|+++|+++.+||.+..
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~ 45 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLY 45 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHH
T ss_pred ccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccc
Confidence 4699999999999999999999999999999999999998763
No 74
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.52 E-value=4.6e-08 Score=93.76 Aligned_cols=44 Identities=18% Similarity=0.252 Sum_probs=39.8
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCccc
Q 015413 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (407)
Q Consensus 19 ~~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (407)
+|.++||+|||||++||+||..|++.|++|+|+|+++.+||.+.
T Consensus 11 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~ 54 (360)
T 3ab1_A 11 HHDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLA 54 (360)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHH
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccc
Confidence 45579999999999999999999999999999999999998775
No 75
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.52 E-value=4.8e-08 Score=99.17 Aligned_cols=48 Identities=17% Similarity=0.255 Sum_probs=41.5
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccccch
Q 015413 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSI 66 (407)
Q Consensus 19 ~~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~t~~~ 66 (407)
.+.++||||||||++|+.||..|++.|++|+|+|+++.+||.+....+
T Consensus 18 ~~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~y 65 (549)
T 4ap3_A 18 GTTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRY 65 (549)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCC
T ss_pred CCCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCC
Confidence 345799999999999999999999999999999999999997754433
No 76
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.50 E-value=9.5e-08 Score=91.68 Aligned_cols=39 Identities=18% Similarity=0.146 Sum_probs=35.4
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (407)
.++||||||||++||++|+.|+++|++|+|||++...+|
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~g 43 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDV 43 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCCc
Confidence 468999999999999999999999999999999874443
No 77
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.50 E-value=7.1e-08 Score=92.66 Aligned_cols=50 Identities=18% Similarity=0.335 Sum_probs=41.5
Q ss_pred chHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 015413 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (407)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (407)
..+.++|.+.++..|++|+.+++|++|..+ ++. +.|++.+| +++||+||+
T Consensus 149 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~--~~~-~~v~~~~g-~~~a~~vV~ 198 (372)
T 2uzz_A 149 ELAIKTWIQLAKEAGCAQLFNCPVTAIRHD--DDG-VTIETADG-EYQAKKAIV 198 (372)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEC--SSS-EEEEESSC-EEEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEEc--CCE-EEEEECCC-eEEcCEEEE
Confidence 478888999888999999999999999886 444 46777666 599999994
No 78
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.49 E-value=6.3e-08 Score=95.71 Aligned_cols=51 Identities=20% Similarity=0.332 Sum_probs=43.6
Q ss_pred chHHHHHHHHHHhcCcEEEeCCceeEEEE---------------ecCCCcEEEEEeCCCcEE--EcCEEEE
Q 015413 279 GELPQAFCRRAAVKGCLYVLRMPVISLLT---------------DQNSGSYKGVRLASGQDI--LSHKLVL 332 (407)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~---------------~~~~g~~~gV~~~~G~~i--~Ad~VI~ 332 (407)
..+.++|.+.+++.|++|+.+++|++|.. + ++++++|++.+| ++ +||+||+
T Consensus 181 ~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~--~~~v~~V~t~~g-~i~~~Ad~VV~ 248 (448)
T 3axb_A 181 EKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQ--EARASAAVLSDG-TRVEVGEKLVV 248 (448)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTS--CEEEEEEEETTS-CEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccC--CCceEEEEeCCC-EEeecCCEEEE
Confidence 47889999999999999999999999987 4 566678887777 68 9999994
No 79
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.49 E-value=8.9e-08 Score=93.64 Aligned_cols=38 Identities=26% Similarity=0.392 Sum_probs=34.9
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCC
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~G 58 (407)
.++||||||||++||++|+.|+++|++|+|+|+++..+
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~ 41 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPR 41 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSC
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 45999999999999999999999999999999997543
No 80
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.49 E-value=8.4e-08 Score=93.74 Aligned_cols=42 Identities=17% Similarity=0.218 Sum_probs=36.8
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCe-EEEEccCCCCCCcc
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGKS-VLHLDPNPFYGSHF 61 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~~-VlvlE~~~~~GG~~ 61 (407)
|..+||||||||++||++|..|+++|.+ |+|+|+++.++...
T Consensus 2 ~~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g 44 (410)
T 3c96_A 2 SEPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLG 44 (410)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccce
Confidence 5568999999999999999999999999 99999998876533
No 81
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.48 E-value=8.7e-08 Score=90.70 Aligned_cols=41 Identities=12% Similarity=0.103 Sum_probs=37.8
Q ss_pred cccEEEECCChhHHHHHHHHhhC--CCeEEEEccCCCCCCccc
Q 015413 22 AFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYGSHFS 62 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~--G~~VlvlE~~~~~GG~~~ 62 (407)
++||||||||++||+||+.|+++ |++|+|+|+++.+||.++
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~ 121 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAW 121 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTT
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccc
Confidence 58999999999999999999997 999999999999987543
No 82
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.48 E-value=9.8e-08 Score=95.91 Aligned_cols=52 Identities=19% Similarity=0.106 Sum_probs=42.8
Q ss_pred cchHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeC---CCc--EEEcCEEEE
Q 015413 278 QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLA---SGQ--DILSHKLVL 332 (407)
Q Consensus 278 ~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~---~G~--~i~Ad~VI~ 332 (407)
...+..+|.+.+++.|++|+++++|++|..+ + ++++|++. +|+ +++||.||.
T Consensus 148 ~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~--~-~~~~V~~~d~~~G~~~~i~A~~VV~ 204 (501)
T 2qcu_A 148 DARLVLANAQMVVRKGGEVLTRTRATSARRE--N-GLWIVEAEDIDTGKKYSWQARGLVN 204 (501)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSEEEEEEEEE--T-TEEEEEEEETTTCCEEEEEESCEEE
T ss_pred HHHHHHHHHHHHHHcCCEEEcCcEEEEEEEe--C-CEEEEEEEECCCCCEEEEECCEEEE
Confidence 3568888999999999999999999999986 4 55788763 575 799999994
No 83
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.48 E-value=1.2e-07 Score=94.08 Aligned_cols=44 Identities=20% Similarity=0.194 Sum_probs=40.2
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCccc
Q 015413 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (407)
Q Consensus 19 ~~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (407)
....+||+|||||.+||+||..|++.|++|+|+|+++++||.+.
T Consensus 119 ~~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~ 162 (456)
T 2vdc_G 119 RELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLV 162 (456)
T ss_dssp SSCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeee
Confidence 34568999999999999999999999999999999999999653
No 84
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.48 E-value=5.7e-08 Score=91.58 Aligned_cols=42 Identities=21% Similarity=0.324 Sum_probs=39.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCccc
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (407)
.++||+|||||++||+||..|++.|++|+|+|+++.+||.+.
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~ 47 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLS 47 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHH
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeh
Confidence 358999999999999999999999999999999999999874
No 85
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.47 E-value=1.1e-07 Score=89.47 Aligned_cols=42 Identities=29% Similarity=0.397 Sum_probs=37.8
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~t 63 (407)
.++||+|||||++||+||..|++.|++|+|+|+ +.+||.+..
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~~ 56 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDK-AVAGGLTAE 56 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SSTTGGGGG
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeC-CCCCccccc
Confidence 469999999999999999999999999999999 578887643
No 86
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.46 E-value=1.1e-07 Score=96.61 Aligned_cols=44 Identities=20% Similarity=0.296 Sum_probs=40.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~t 63 (407)
+.++||||||||++||+||..|+++|++|+|+|+++.+||.+..
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~ 57 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYW 57 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHH
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccc
Confidence 45799999999999999999999999999999999999997653
No 87
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.46 E-value=1.3e-07 Score=92.02 Aligned_cols=41 Identities=12% Similarity=0.122 Sum_probs=37.2
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCc
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~ 60 (407)
+..+||+|||||++||++|..|+++|.+|+|+|+++.++.+
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~ 64 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREAR 64 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCC
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCcccc
Confidence 35689999999999999999999999999999999877653
No 88
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.46 E-value=1.4e-07 Score=91.20 Aligned_cols=50 Identities=18% Similarity=0.221 Sum_probs=41.5
Q ss_pred chHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 015413 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (407)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (407)
..+.++|.+.++..|++++++++|++|..+ ++. +.|++.+| +++||.||.
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~--~~~-~~v~~~~g-~~~a~~vV~ 199 (389)
T 2gf3_A 150 ENCIRAYRELAEARGAKVLTHTRVEDFDIS--PDS-VKIETANG-SYTADKLIV 199 (389)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEC--SSC-EEEEETTE-EEEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEec--CCe-EEEEeCCC-EEEeCEEEE
Confidence 578889999999999999999999999885 444 46776555 799999994
No 89
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.46 E-value=7.6e-08 Score=95.69 Aligned_cols=52 Identities=13% Similarity=0.248 Sum_probs=42.7
Q ss_pred cchHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEE-eCCCcEEEcCEEEE
Q 015413 278 QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVR-LASGQDILSHKLVL 332 (407)
Q Consensus 278 ~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~-~~~G~~i~Ad~VI~ 332 (407)
-.++.+.+.+.++..|.+++++++|++|..+ ++..+.|+ +.+|+ +.||.||+
T Consensus 210 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~~~~~v~~~~~g~-i~aD~Vv~ 262 (463)
T 4dna_A 210 DQDMRRGLHAAMEEKGIRILCEDIIQSVSAD--ADGRRVATTMKHGE-IVADQVML 262 (463)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEEC--TTSCEEEEESSSCE-EEESEEEE
T ss_pred CHHHHHHHHHHHHHCCCEEECCCEEEEEEEc--CCCEEEEEEcCCCe-EEeCEEEE
Confidence 3567888888889999999999999999875 33335788 88887 99999994
No 90
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.45 E-value=1.3e-07 Score=88.56 Aligned_cols=40 Identities=18% Similarity=0.275 Sum_probs=37.6
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 015413 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~t 63 (407)
++||+|||||++||+||..|+++|++|+|+|++ +||.+..
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~ 54 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTE 54 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGG
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecc
Confidence 589999999999999999999999999999998 8988764
No 91
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.45 E-value=1.5e-07 Score=93.06 Aligned_cols=44 Identities=23% Similarity=0.252 Sum_probs=40.3
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCC--eEEEEccCCCCCCcccc
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGK--SVLHLDPNPFYGSHFSS 63 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~--~VlvlE~~~~~GG~~~t 63 (407)
+..+||+|||||++||+||..|++.|. +|+|+|+++.+||.+..
T Consensus 4 ~~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~ 49 (447)
T 2gv8_A 4 PTIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNY 49 (447)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSC
T ss_pred CCCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecC
Confidence 346899999999999999999999999 99999999999997654
No 92
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.44 E-value=1.4e-07 Score=91.15 Aligned_cols=40 Identities=15% Similarity=0.068 Sum_probs=36.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (407)
|..+||||||||++||++|..|+++|++|+|+|+++.+++
T Consensus 9 m~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~ 48 (379)
T 3alj_A 9 GKTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRA 48 (379)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCC
Confidence 4568999999999999999999999999999999988764
No 93
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.44 E-value=1.3e-07 Score=85.02 Aligned_cols=36 Identities=17% Similarity=0.285 Sum_probs=33.3
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
|.+|||||||||++||.||..|++.|.+|+|+|++.
T Consensus 1 M~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~ 36 (232)
T 2cul_A 1 MAAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSL 36 (232)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 346999999999999999999999999999999984
No 94
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.43 E-value=1.4e-07 Score=88.87 Aligned_cols=43 Identities=19% Similarity=0.315 Sum_probs=39.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~t 63 (407)
+.++||+|||||++||+||..|++.|++|+|+|++ .+||.+..
T Consensus 6 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~ 48 (325)
T 2q7v_A 6 AHDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAW 48 (325)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGG
T ss_pred cccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCccccc
Confidence 34699999999999999999999999999999999 78987653
No 95
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.43 E-value=1.3e-07 Score=94.33 Aligned_cols=41 Identities=22% Similarity=0.239 Sum_probs=37.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcc
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~ 61 (407)
.+|||+|||||.+||+||..|++.|++|+|+|+++.+||..
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~ 42 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKT 42 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCC
Confidence 46999999999999999999999999999999998666654
No 96
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.41 E-value=2e-07 Score=94.16 Aligned_cols=44 Identities=34% Similarity=0.480 Sum_probs=40.6
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCccc
Q 015413 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (407)
Q Consensus 19 ~~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (407)
++.++||||||||.+|++||..|++.|++|+|+|+++.+||.+.
T Consensus 40 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~ 83 (523)
T 1mo9_A 40 DPREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCP 83 (523)
T ss_dssp CCSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHH
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCccc
Confidence 45579999999999999999999999999999999998999764
No 97
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.41 E-value=1.4e-07 Score=88.05 Aligned_cols=42 Identities=19% Similarity=0.294 Sum_probs=38.5
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEE-EccCCCCCCcccc
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGKSVLH-LDPNPFYGSHFSS 63 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~~Vlv-lE~~~~~GG~~~t 63 (407)
.++||+|||||.+||+||..|+++|++|+| +|+ +.+||.+..
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~ 45 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITS 45 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGG
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeee
Confidence 468999999999999999999999999999 999 788997654
No 98
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.40 E-value=1.8e-07 Score=94.90 Aligned_cols=47 Identities=21% Similarity=0.287 Sum_probs=41.9
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccccch
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSI 66 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~t~~~ 66 (407)
+.++||||||||++|++||..|++.|++|+|+|+++.+||.+....+
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~y 53 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRY 53 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCC
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCC
Confidence 45689999999999999999999999999999999999998754333
No 99
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.39 E-value=1.5e-07 Score=95.37 Aligned_cols=47 Identities=17% Similarity=0.164 Sum_probs=41.7
Q ss_pred CCcccEEEECCChhHHHHHHHHh-hCCCeEEEEccCCCCCCcccccch
Q 015413 20 PTAFDLIVIGTGLPESVISAAAS-ASGKSVLHLDPNPFYGSHFSSLSI 66 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La-~~G~~VlvlE~~~~~GG~~~t~~~ 66 (407)
+.++||||||||++||+||..|+ +.|++|+|+|+++.+||.+....+
T Consensus 6 ~~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~y 53 (540)
T 3gwf_A 6 THTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRY 53 (540)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCC
Confidence 34689999999999999999999 999999999999999997754433
No 100
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.39 E-value=2.2e-07 Score=90.37 Aligned_cols=38 Identities=18% Similarity=0.228 Sum_probs=35.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCC
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~ 57 (407)
+..+||+|||||++||++|..|+++|++|+|+|+++..
T Consensus 3 ~~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 40 (397)
T 2vou_A 3 PTTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQP 40 (397)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 45689999999999999999999999999999998763
No 101
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.39 E-value=1.8e-07 Score=89.59 Aligned_cols=43 Identities=19% Similarity=0.305 Sum_probs=38.9
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCC-eEEEEccCCCCCCcccc
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNPFYGSHFSS 63 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~-~VlvlE~~~~~GG~~~t 63 (407)
|.++||+|||||++||+||..|++.|+ +|+|+|+++ +||.+..
T Consensus 2 m~~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~ 45 (369)
T 3d1c_A 2 MQHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKH 45 (369)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHT
T ss_pred CccCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCcccc
Confidence 457999999999999999999999999 999999999 9986543
No 102
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.38 E-value=1.3e-07 Score=94.51 Aligned_cols=43 Identities=19% Similarity=0.285 Sum_probs=38.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~t 63 (407)
+.+|||||||||.+||+||..|++.|++|+|+|++ .+||.+..
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~~~ 60 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGGTCVN 60 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCcccc
Confidence 45799999999999999999999999999999976 88987643
No 103
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.37 E-value=2.6e-07 Score=93.85 Aligned_cols=40 Identities=13% Similarity=0.146 Sum_probs=36.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCc
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~ 60 (407)
.++||+|||||++||++|..|+++|.+|+|||+++.++..
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~ 64 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITH 64 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCC
Confidence 3689999999999999999999999999999999887643
No 104
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.37 E-value=1.2e-07 Score=94.66 Aligned_cols=44 Identities=18% Similarity=0.257 Sum_probs=40.2
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~t 63 (407)
+.++||||||||.+|++||..|++.|++|+|+|+++.+||.+..
T Consensus 3 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~ 46 (478)
T 1v59_A 3 NKSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLN 46 (478)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccce
Confidence 34699999999999999999999999999999999999997643
No 105
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.37 E-value=1.9e-07 Score=95.61 Aligned_cols=53 Identities=13% Similarity=0.195 Sum_probs=43.4
Q ss_pred chHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEe---CCCc--EEEcCEEEE
Q 015413 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL---ASGQ--DILSHKLVL 332 (407)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~---~~G~--~i~Ad~VI~ 332 (407)
..+.++|.+.+...|++|+++++|++|..+ +++++++|.+ .+|+ +++|+.||+
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~-~~g~v~Gv~~~~~~~g~~~~i~A~~VVl 200 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKN-QDGAVVGCTALCIETGEVVYFKARATVL 200 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEEC-TTSCEEEEEEEETTTCCEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEEC-CCCEEEEEEEEEcCCCeEEEEEcCEEEE
Confidence 578888998888899999999999999985 2577888874 4565 589999984
No 106
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.36 E-value=3e-07 Score=89.39 Aligned_cols=37 Identities=14% Similarity=0.297 Sum_probs=34.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCC
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~ 57 (407)
.++||||||||++||++|..|+++|++|+|+|+++.+
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~ 41 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRE 41 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 3589999999999999999999999999999998765
No 107
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.36 E-value=2.5e-07 Score=93.39 Aligned_cols=43 Identities=30% Similarity=0.366 Sum_probs=38.8
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCC--------CCCCcccc
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP--------FYGSHFSS 63 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~--------~~GG~~~t 63 (407)
.+|||||||||.+|++||..|++.|++|+|+|+++ .+||.+..
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~ 81 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVN 81 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCC
Confidence 46999999999999999999999999999999965 78997643
No 108
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.36 E-value=2.3e-07 Score=87.92 Aligned_cols=43 Identities=21% Similarity=0.281 Sum_probs=38.3
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCccc
Q 015413 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (407)
Q Consensus 19 ~~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (407)
++..+||+|||||++||+||..|++.|++|+|+|++ .+||.+.
T Consensus 11 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~ 53 (335)
T 2a87_A 11 HHPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGALM 53 (335)
T ss_dssp CCCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGGG
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCcee
Confidence 345799999999999999999999999999999975 7888754
No 109
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.36 E-value=2.8e-07 Score=92.82 Aligned_cols=38 Identities=39% Similarity=0.621 Sum_probs=35.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCC
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~ 57 (407)
+.++||||||||++||++|+.|+++|++|+|+|+++..
T Consensus 5 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~ 42 (512)
T 3e1t_A 5 PEVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFP 42 (512)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSS
T ss_pred CccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCC
Confidence 45699999999999999999999999999999999843
No 110
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.36 E-value=2.1e-07 Score=95.09 Aligned_cols=48 Identities=33% Similarity=0.459 Sum_probs=40.6
Q ss_pred CCCCCCCCC-CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCC-CCC
Q 015413 11 PVPPYPPIE-PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP-FYG 58 (407)
Q Consensus 11 ~~~~~~~~~-~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~-~~G 58 (407)
-|||...+. ..+|||||||||++|+.||..|++.|.+|+|+|++. .+|
T Consensus 16 ~~~~~~~~~~~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG 65 (651)
T 3ces_A 16 LVPRGSHMFYPDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLG 65 (651)
T ss_dssp EECCCSCEECSSCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTT
T ss_pred CCCCCCCCCCCCcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccc
Confidence 367766653 246999999999999999999999999999999984 455
No 111
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.35 E-value=2.8e-07 Score=89.93 Aligned_cols=40 Identities=25% Similarity=0.391 Sum_probs=35.9
Q ss_pred CcccEEEECCChhHHHHHHHHhhC--CCeEEEEccCCCCCCc
Q 015413 21 TAFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYGSH 60 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~--G~~VlvlE~~~~~GG~ 60 (407)
.++||||||||++||++|+.|+++ |++|+|||+++..+|.
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~ 76 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEE 76 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTT
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcc
Confidence 359999999999999999999999 9999999998765554
No 112
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.34 E-value=2.2e-07 Score=92.43 Aligned_cols=42 Identities=24% Similarity=0.323 Sum_probs=39.3
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 015413 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~t 63 (407)
+|||||||||.+|++||..|++.|++|+|+|+++.+||.+..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 43 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLN 43 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCC
Confidence 489999999999999999999999999999999999997653
No 113
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.34 E-value=2.1e-07 Score=87.94 Aligned_cols=44 Identities=14% Similarity=0.213 Sum_probs=39.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEcc----CCCCCCcccc
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDP----NPFYGSHFSS 63 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~----~~~~GG~~~t 63 (407)
|..+||+|||||++|+++|..|++.|++|+|+|+ ....||.+..
T Consensus 6 ~~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~ 53 (333)
T 1vdc_A 6 THNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTT 53 (333)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGG
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeee
Confidence 4568999999999999999999999999999999 6678887543
No 114
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.34 E-value=2.8e-07 Score=91.74 Aligned_cols=44 Identities=18% Similarity=0.229 Sum_probs=40.4
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~t 63 (407)
+.++||||||||.+|++||..|++.|++|+|+|+++.+||.+..
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~ 47 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLN 47 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHH
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccC
Confidence 34689999999999999999999999999999999999998653
No 115
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.34 E-value=2.8e-07 Score=92.24 Aligned_cols=43 Identities=30% Similarity=0.314 Sum_probs=39.0
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEcc--------CCCCCCcccc
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDP--------NPFYGSHFSS 63 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~--------~~~~GG~~~t 63 (407)
.+|||||||||.+||+||..|++.|++|+++|+ +..+||.+..
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~ 55 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVN 55 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecc
Confidence 469999999999999999999999999999998 6789997643
No 116
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.34 E-value=2.3e-07 Score=95.92 Aligned_cols=52 Identities=15% Similarity=0.221 Sum_probs=43.6
Q ss_pred chHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEe---CCCc--EEEcCEEEE
Q 015413 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL---ASGQ--DILSHKLVL 332 (407)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~---~~G~--~i~Ad~VI~ 332 (407)
..|.++|.+.+...|++|+.++.|++|..+ +++++||.+ .+|+ .++|+.||+
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~--~g~v~Gv~~~~~~~G~~~~i~A~~VVl 214 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIHQ--DGKCYGAVVRDLVTGDIIAYVAKGTLI 214 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEE--TTEEEEEEEEETTTCCEEEEECSEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEec--CCEEEEEEEEECCCCcEEEEEcCEEEE
Confidence 478899999888899999999999999986 788888764 4566 489999994
No 117
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.34 E-value=1.8e-07 Score=92.75 Aligned_cols=37 Identities=27% Similarity=0.541 Sum_probs=34.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCC
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~ 57 (407)
.++||||||||++||+||..|+++|++|+|+|+++..
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~ 41 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWN 41 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGG
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 3689999999999999999999999999999998764
No 118
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.34 E-value=2.3e-07 Score=92.52 Aligned_cols=44 Identities=25% Similarity=0.335 Sum_probs=40.3
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~t 63 (407)
+.++||||||||.+|++||..|++.|++|+|+|+++.+||.+..
T Consensus 4 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~ 47 (474)
T 1zmd_A 4 PIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLN 47 (474)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccc
Confidence 34699999999999999999999999999999999999997643
No 119
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.33 E-value=2.1e-07 Score=93.00 Aligned_cols=43 Identities=21% Similarity=0.274 Sum_probs=39.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCccc
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (407)
+.+|||||||||.+|++||..|++.|++|+|+|+++.+||.+.
T Consensus 4 ~~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~ 46 (482)
T 1ojt_A 4 DAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCL 46 (482)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCcee
Confidence 3469999999999999999999999999999999999998654
No 120
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.33 E-value=2.3e-07 Score=87.03 Aligned_cols=42 Identities=12% Similarity=0.187 Sum_probs=37.7
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCccc
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (407)
|..+||+|||||++||+||..|++.|++|+|+|+. .+||.+.
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~ 44 (320)
T 1trb_A 3 TKHSKLLILGSGPAGYTAAVYAARANLQPVLITGM-EKGGQLT 44 (320)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS-STTGGGG
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC-CCCceEe
Confidence 45799999999999999999999999999999974 7888654
No 121
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.33 E-value=2.2e-07 Score=92.40 Aligned_cols=42 Identities=26% Similarity=0.464 Sum_probs=38.3
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCccc
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (407)
|+++||||||||++|++||..|++.|++|+|+|++ .+||.+.
T Consensus 1 M~~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~ 42 (464)
T 2a8x_A 1 MTHYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCL 42 (464)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCccc
Confidence 34699999999999999999999999999999998 7888764
No 122
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.33 E-value=3.7e-07 Score=93.12 Aligned_cols=60 Identities=18% Similarity=0.305 Sum_probs=45.7
Q ss_pred eEeecCC--cchHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeC---CCc--EEEcCEEEE
Q 015413 271 LIYPIYG--QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLA---SGQ--DILSHKLVL 332 (407)
Q Consensus 271 ~~~p~gG--~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~---~G~--~i~Ad~VI~ 332 (407)
+.|+.+. -..+..++++.++..|++|+.+++|++|..+ ++++++|++. +|+ +++||.||.
T Consensus 178 ~~~~dg~v~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~--~~~v~gV~~~d~~tg~~~~i~A~~VV~ 244 (571)
T 2rgh_A 178 GVYLDFRNNDARLVIDNIKKAAEDGAYLVSKMKAVGFLYE--GDQIVGVKARDLLTDEVIEIKAKLVIN 244 (571)
T ss_dssp EEECCEECCHHHHHHHHHHHHHHTTCEEESSEEEEEEEEE--TTEEEEEEEEETTTCCEEEEEBSCEEE
T ss_pred EEecCCeEchHHHHHHHHHHHHHcCCeEEeccEEEEEEEe--CCEEEEEEEEEcCCCCEEEEEcCEEEE
Confidence 4455432 2357788888888999999999999999987 6777788753 343 699999994
No 123
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.33 E-value=3.2e-07 Score=96.36 Aligned_cols=44 Identities=20% Similarity=0.286 Sum_probs=40.5
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~t 63 (407)
...+||+|||||.+||+||..|++.|++|+|+|+++++||.+..
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~ 430 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQ 430 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHH
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeee
Confidence 34689999999999999999999999999999999999997654
No 124
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.33 E-value=2.1e-07 Score=93.33 Aligned_cols=40 Identities=25% Similarity=0.364 Sum_probs=37.0
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCccc
Q 015413 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (407)
+|||||||||.+||+||..|++.|++|+|+|++ .+||.+.
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~-~~GGtc~ 47 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGG-AYGTTCA 47 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESS-CSSCHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCC-CCCCccc
Confidence 599999999999999999999999999999997 5999764
No 125
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.33 E-value=3.1e-07 Score=93.96 Aligned_cols=39 Identities=15% Similarity=0.283 Sum_probs=36.9
Q ss_pred cccEEEECCChhHHHHHHHHhhC------CCeEEEEccCCCCCCc
Q 015413 22 AFDLIVIGTGLPESVISAAASAS------GKSVLHLDPNPFYGSH 60 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~------G~~VlvlE~~~~~GG~ 60 (407)
++||||||||++||+||+.|++. |.+|+||||++.+|+.
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~ 79 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAH 79 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTT
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCc
Confidence 48999999999999999999999 9999999999998875
No 126
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.32 E-value=4e-07 Score=93.72 Aligned_cols=42 Identities=14% Similarity=0.237 Sum_probs=38.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCccc
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (407)
..|||||||+|++||+||..|+++|++|+|+|+.+..||.+.
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~~ 86 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLKI 86 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSST
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCccc
Confidence 469999999999999999999999999999999999998553
No 127
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.32 E-value=3.4e-07 Score=91.81 Aligned_cols=41 Identities=17% Similarity=0.202 Sum_probs=38.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCc
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~ 60 (407)
...+||+|||||++||++|..|++.|++|+|+|+++.+|+.
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~ 130 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRH 130 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCC
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCC
Confidence 34689999999999999999999999999999999999875
No 128
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.32 E-value=2.6e-07 Score=91.58 Aligned_cols=42 Identities=26% Similarity=0.333 Sum_probs=39.1
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 015413 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~t 63 (407)
+|||||||||.+|++||..|++.|++|+|+|+++.+||.+..
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 42 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLR 42 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHH
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccce
Confidence 389999999999999999999999999999999999997653
No 129
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.32 E-value=3.7e-07 Score=92.97 Aligned_cols=48 Identities=27% Similarity=0.319 Sum_probs=37.4
Q ss_pred CCCCCCCCC--CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCC-CCCC
Q 015413 12 VPPYPPIEP--TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP-FYGS 59 (407)
Q Consensus 12 ~~~~~~~~~--~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~-~~GG 59 (407)
||....+.. .+|||||||||++|+.||..|++.|.+|+|+|++. .+|+
T Consensus 15 ~~~~~~~~~~~~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~ 65 (637)
T 2zxi_A 15 VPAGSHMAWVVDEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQ 65 (637)
T ss_dssp ----CCBCCGGGCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC
T ss_pred ccccccccccCCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCC
Confidence 555554432 46999999999999999999999999999999984 5664
No 130
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.32 E-value=4.1e-07 Score=85.04 Aligned_cols=41 Identities=17% Similarity=0.293 Sum_probs=37.0
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC-eEEEEccCCCCCCcccc
Q 015413 22 AFDLIVIGTGLPESVISAAASASGK-SVLHLDPNPFYGSHFSS 63 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G~-~VlvlE~~~~~GG~~~t 63 (407)
+|||+|||||++||+||..|++.|+ +|+|+|++ .+||.+..
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~~~ 42 (311)
T 2q0l_A 1 MIDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQITG 42 (311)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGGGG
T ss_pred CceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCccccc
Confidence 3899999999999999999999999 99999995 78887653
No 131
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.32 E-value=3.1e-07 Score=91.33 Aligned_cols=42 Identities=19% Similarity=0.260 Sum_probs=38.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCccc
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (407)
+.++||||||||.+|++||..|++.|++|+|+|++ .+||.+.
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~ 43 (467)
T 1zk7_A 2 EPPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCV 43 (467)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCcccc
Confidence 35689999999999999999999999999999998 7898765
No 132
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.32 E-value=4.8e-07 Score=90.77 Aligned_cols=40 Identities=18% Similarity=0.227 Sum_probs=36.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (407)
+.++||+|||||++||++|..|+++|.+|+|||+++.++.
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~ 48 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTG 48 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CC
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 4579999999999999999999999999999999987753
No 133
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.31 E-value=5.1e-07 Score=91.40 Aligned_cols=38 Identities=24% Similarity=0.367 Sum_probs=35.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCC
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~G 58 (407)
.++||||||||++||++|+.|++.|.+|+|||+++..+
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~ 41 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLS 41 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCC
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 46899999999999999999999999999999998764
No 134
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.31 E-value=3.6e-07 Score=92.57 Aligned_cols=40 Identities=18% Similarity=0.329 Sum_probs=35.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcc
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~ 61 (407)
.++||||||+|++||+||+.|++ |.+|+||||.+..||.+
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~s 46 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGST 46 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC---
T ss_pred CCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCCh
Confidence 46899999999999999999999 99999999999887654
No 135
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.30 E-value=3.2e-07 Score=91.23 Aligned_cols=51 Identities=14% Similarity=0.094 Sum_probs=42.2
Q ss_pred chHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCc-EEEcCEEEE
Q 015413 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ-DILSHKLVL 332 (407)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~-~i~Ad~VI~ 332 (407)
.++.+.+.+.+++.|.++++++.|++|..+ ++. +.|++.+|+ ++.||.||+
T Consensus 207 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~--~~~-~~v~~~~G~~~i~~D~vv~ 258 (463)
T 2r9z_A 207 PLLSATLAENMHAQGIETHLEFAVAALERD--AQG-TTLVAQDGTRLEGFDSVIW 258 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEEE--TTE-EEEEETTCCEEEEESEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEe--CCe-EEEEEeCCcEEEEcCEEEE
Confidence 356777888888999999999999999875 333 578888998 899999994
No 136
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.30 E-value=2.9e-07 Score=91.91 Aligned_cols=42 Identities=21% Similarity=0.347 Sum_probs=38.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCccc
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (407)
+.++||||||||.+|++||..|++.|++|+|+|++ .+||.+.
T Consensus 9 ~~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~ 50 (479)
T 2hqm_A 9 TKHYDYLVIGGGSGGVASARRAASYGAKTLLVEAK-ALGGTCV 50 (479)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS-CTTHHHH
T ss_pred cccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC-CcCCcCc
Confidence 35799999999999999999999999999999998 6898765
No 137
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.29 E-value=4.4e-07 Score=90.70 Aligned_cols=53 Identities=8% Similarity=0.162 Sum_probs=40.5
Q ss_pred chHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCc-----EEEcCEEEEC
Q 015413 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ-----DILSHKLVLD 333 (407)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~-----~i~Ad~VI~~ 333 (407)
.++.+.+.+.+++.|.++++++.|++|..+ +++. +.|++.++. ++.||.||+.
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~~~-~~v~~~~~~~~~~~~~~~D~vi~a 284 (483)
T 3dgh_A 227 QQMAELVAASMEERGIPFLRKTVPLSVEKQ-DDGK-LLVKYKNVETGEESEDVYDTVLWA 284 (483)
T ss_dssp HHHHHHHHHHHHHTTCCEEETEEEEEEEEC-TTSC-EEEEEEETTTCCEEEEEESEEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEc-CCCc-EEEEEecCCCCceeEEEcCEEEEC
Confidence 467778888888999999999999999875 2444 356665554 7899999943
No 138
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.29 E-value=3.3e-07 Score=90.76 Aligned_cols=51 Identities=8% Similarity=0.094 Sum_probs=41.9
Q ss_pred hHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 015413 280 ELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (407)
Q Consensus 280 ~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (407)
++.+.+.+.+++.|.++++++.|++|..+ ++..+.|++.+|+++.||.||+
T Consensus 209 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~~~~~v~~~~g~~i~~D~vv~ 259 (450)
T 1ges_A 209 MISETLVEVMNAEGPQLHTNAIPKAVVKN--TDGSLTLELEDGRSETVDCLIW 259 (450)
T ss_dssp HHHHHHHHHHHHHSCEEECSCCEEEEEEC--TTSCEEEEETTSCEEEESEEEE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEe--CCcEEEEEECCCcEEEcCEEEE
Confidence 57788888888899999999999999865 3222467788998999999994
No 139
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.28 E-value=4e-07 Score=93.48 Aligned_cols=52 Identities=19% Similarity=0.320 Sum_probs=43.4
Q ss_pred chHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEe---CCCc--EEEcCEEEE
Q 015413 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL---ASGQ--DILSHKLVL 332 (407)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~---~~G~--~i~Ad~VI~ 332 (407)
..|.++|.+.+...|++|+.++.|++|..+ +++++||.+ .+|+ +++|+.||+
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~--~g~v~Gv~~~~~~~G~~~~i~A~~VVl 211 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLME--NGECRGVIALCIEDGTIHRFRAKNTVI 211 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEE--TTEEEEEEEEETTTCCEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEE--CCEEEEEEEEEcCCCcEEEEEcCeEEE
Confidence 478888988888899999999999999986 788888875 3565 589999884
No 140
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.28 E-value=3.2e-07 Score=87.56 Aligned_cols=37 Identities=11% Similarity=0.020 Sum_probs=33.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCC------CeEEEEccCCCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASG------KSVLHLDPNPFYGS 59 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G------~~VlvlE~~~~~GG 59 (407)
.||||||||++||++|+.|+++| ++|+|||++...+|
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~~~ 43 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLT 43 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGGGS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCCCCC
Confidence 39999999999999999999998 99999999875544
No 141
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.27 E-value=6.6e-07 Score=92.54 Aligned_cols=52 Identities=13% Similarity=0.116 Sum_probs=40.9
Q ss_pred chHHHHHHHHHHhc--CcEEEeCCceeEEEEecCCC---cEEEEEe---CCCc--EEEcCEEEE
Q 015413 279 GELPQAFCRRAAVK--GCLYVLRMPVISLLTDQNSG---SYKGVRL---ASGQ--DILSHKLVL 332 (407)
Q Consensus 279 ~~l~~al~r~~~~~--Gg~i~l~~~V~~I~~~~~~g---~~~gV~~---~~G~--~i~Ad~VI~ 332 (407)
..+..+|.+.+... |.+|+.++.|.+|..+ ++ +++||.. .+|+ +++|+.||+
T Consensus 166 ~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~--~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVL 227 (662)
T 3gyx_A 166 ESYKVIVAEAAKNALGQDRIIERIFIVKLLLD--KNTPNRIAGAVGFNLRANEVHIFKANAMVV 227 (662)
T ss_dssp TSHHHHHHHHHHHHHCTTTEECSEEECCCEEC--SSSTTBEEEEEEEESSSSCEEEEECSEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEEceEEEEEEEe--CCccceEEEEEEEEcCCCcEEEEEeCEEEE
Confidence 46777888877777 9999999999999986 44 8888864 3454 489999994
No 142
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.26 E-value=7.1e-07 Score=90.97 Aligned_cols=37 Identities=22% Similarity=0.231 Sum_probs=33.6
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCC
Q 015413 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~G 58 (407)
++||||||||++||++|+.|+++|++|+|||+++..+
T Consensus 49 ~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~ 85 (570)
T 3fmw_A 49 TTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPV 85 (570)
T ss_dssp --CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCC
Confidence 5899999999999999999999999999999988765
No 143
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.26 E-value=4.6e-07 Score=90.68 Aligned_cols=52 Identities=13% Similarity=0.144 Sum_probs=42.8
Q ss_pred chHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 015413 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (407)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (407)
.++.+.+.+.+++.|.+|++++.|++|..+ ++..+.|++.+|+++.||.||+
T Consensus 231 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~~~~v~~~~G~~i~~D~vv~ 282 (490)
T 1fec_A 231 SELRKQLTEQLRANGINVRTHENPAKVTKN--ADGTRHVVFESGAEADYDVVML 282 (490)
T ss_dssp HHHHHHHHHHHHHTTEEEEETCCEEEEEEC--TTSCEEEEETTSCEEEESEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEc--CCCEEEEEECCCcEEEcCEEEE
Confidence 367788888888999999999999999875 3322578888998999999994
No 144
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.25 E-value=4.2e-07 Score=90.36 Aligned_cols=42 Identities=31% Similarity=0.379 Sum_probs=38.4
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCccc
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (407)
|+++||||||||.+|++||..|++.|++|+|+|+++ +||.+.
T Consensus 4 m~~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~ 45 (464)
T 2eq6_A 4 MKTYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCL 45 (464)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHH
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCC
Confidence 446999999999999999999999999999999988 898654
No 145
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.25 E-value=5.1e-07 Score=87.50 Aligned_cols=35 Identities=14% Similarity=0.226 Sum_probs=33.1
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 015413 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (407)
++||+|||||++||++|..|+++|++|+|+|+++.
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 36 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTP 36 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 47999999999999999999999999999999875
No 146
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.25 E-value=5.8e-07 Score=91.81 Aligned_cols=46 Identities=20% Similarity=0.301 Sum_probs=36.4
Q ss_pred CCCCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCC-CCCCc
Q 015413 15 YPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP-FYGSH 60 (407)
Q Consensus 15 ~~~~~~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~-~~GG~ 60 (407)
..+..+.+|||||||||++|+.||..|++.|.+|+|+|++. .+|+.
T Consensus 14 ~~~~~~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~ 60 (641)
T 3cp8_A 14 LVPRGSHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARM 60 (641)
T ss_dssp ------CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCC
T ss_pred ccccccCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCC
Confidence 44444557999999999999999999999999999999985 56653
No 147
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.25 E-value=6e-07 Score=83.03 Aligned_cols=38 Identities=21% Similarity=0.311 Sum_probs=34.7
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 015413 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (407)
++||+|||||++||+||..|++.|++|+|+|+++..|+
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~ 39 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNR 39 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGG
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccc
Confidence 38999999999999999999999999999999876554
No 148
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.24 E-value=7.9e-07 Score=89.20 Aligned_cols=39 Identities=21% Similarity=0.343 Sum_probs=35.9
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (407)
.++||+|||||++||++|..|+++|.+|+|||+++..+.
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~ 49 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTG 49 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCC
Confidence 468999999999999999999999999999999987753
No 149
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.23 E-value=4.8e-07 Score=90.69 Aligned_cols=53 Identities=9% Similarity=0.156 Sum_probs=43.2
Q ss_pred chHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 015413 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (407)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~ 333 (407)
.++.+.+.+.+++.|.++++++.|++|..+ ++..+.|++.+|+++.||.||+.
T Consensus 235 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~~~~v~~~~G~~i~~D~vv~a 287 (495)
T 2wpf_A 235 ETIREEVTKQLTANGIEIMTNENPAKVSLN--TDGSKHVTFESGKTLDVDVVMMA 287 (495)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEC--TTSCEEEEETTSCEEEESEEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEc--CCceEEEEECCCcEEEcCEEEEC
Confidence 367788888888999999999999999865 33335788889999999999953
No 150
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.23 E-value=6.4e-07 Score=89.74 Aligned_cols=42 Identities=14% Similarity=0.191 Sum_probs=39.0
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~t 63 (407)
..+||||||||++||+||..|++. ++|+|+|+++++||.+..
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~ 148 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWL 148 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGG
T ss_pred ccCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeec
Confidence 468999999999999999999999 999999999999998754
No 151
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.22 E-value=8.7e-07 Score=85.92 Aligned_cols=35 Identities=17% Similarity=0.284 Sum_probs=32.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~ 57 (407)
.+|+|||||++||++|..|+++|++|+|+||++.+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAA 36 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 47999999999999999999999999999997654
No 152
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.21 E-value=6.9e-07 Score=88.61 Aligned_cols=41 Identities=29% Similarity=0.310 Sum_probs=37.8
Q ss_pred CcccEEEECCChhHHHHHHHHhhCC-----CeEEEEccCCCCCCcc
Q 015413 21 TAFDLIVIGTGLPESVISAAASASG-----KSVLHLDPNPFYGSHF 61 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G-----~~VlvlE~~~~~GG~~ 61 (407)
..+||||||||++||+||..|++.| .+|+|||+++.+|...
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~ 74 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHG 74 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSG
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcC
Confidence 4689999999999999999999999 9999999999998544
No 153
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.21 E-value=1.1e-06 Score=88.97 Aligned_cols=51 Identities=16% Similarity=0.228 Sum_probs=43.0
Q ss_pred chHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEE
Q 015413 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLV 331 (407)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI 331 (407)
..+.+.|.+.++..|++++.+ .|++|..+ +++.+++|++.+|++++||.||
T Consensus 165 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~-~~g~~~~v~~~~g~~i~ad~vV 215 (538)
T 2aqj_A 165 HLVADFLKRWAVERGVNRVVD-EVVDVRLN-NRGYISNLLTKEGRTLEADLFI 215 (538)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEEC-TTSCEEEEEETTSCEECCSEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEe-eEeEEEEc-CCCcEEEEEECCCcEEEeCEEE
Confidence 567788888888899999999 89999875 3566678888888889999999
No 154
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.21 E-value=1.2e-06 Score=83.77 Aligned_cols=39 Identities=21% Similarity=0.126 Sum_probs=34.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcc
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~ 61 (407)
+||+|||||++|+.||..|+++|++|+|+|++...+.-.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~tp~ 40 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMTPA 40 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCCSS
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCCcc
Confidence 699999999999999999999999999999987554443
No 155
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.21 E-value=6.7e-07 Score=88.00 Aligned_cols=33 Identities=9% Similarity=0.050 Sum_probs=32.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
+||+|||||++||++|+.|+++|++|+|+|+++
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 799999999999999999999999999999987
No 156
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.21 E-value=9.3e-07 Score=87.86 Aligned_cols=41 Identities=12% Similarity=0.297 Sum_probs=38.8
Q ss_pred ccEEEECCChhHHHHHHHHhh---CCCe---EEEEccCCCCCCcccc
Q 015413 23 FDLIVIGTGLPESVISAAASA---SGKS---VLHLDPNPFYGSHFSS 63 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~---~G~~---VlvlE~~~~~GG~~~t 63 (407)
+||+|||||.+||+||..|++ .|.+ |+|+|+++.+||.+..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~ 49 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNY 49 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeec
Confidence 699999999999999999999 9999 9999999999998764
No 157
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.20 E-value=5.2e-07 Score=89.50 Aligned_cols=42 Identities=19% Similarity=0.233 Sum_probs=38.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~t 63 (407)
.+|||||||||.+|++||..|++.|++|+|+|+ +.+||.+..
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~~ 45 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCLN 45 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCCC
Confidence 468999999999999999999999999999999 789998753
No 158
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.20 E-value=1.1e-06 Score=89.29 Aligned_cols=51 Identities=25% Similarity=0.234 Sum_probs=43.6
Q ss_pred chHHHHHHHHHHhc-CcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEE
Q 015413 279 GELPQAFCRRAAVK-GCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLV 331 (407)
Q Consensus 279 ~~l~~al~r~~~~~-Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI 331 (407)
..+.+.|.+.++.. |++++++ .|++|..+ +++.+++|++.+|++++||.||
T Consensus 194 ~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~-~~g~~~~v~~~~G~~i~ad~vI 245 (550)
T 2e4g_A 194 HLVADFLRRFATEKLGVRHVED-RVEHVQRD-ANGNIESVRTATGRVFDADLFV 245 (550)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEC-CEEEEEEC-TTSCEEEEEETTSCEEECSEEE
T ss_pred HHHHHHHHHHHHhcCCcEEEEC-eEeEEEEc-CCCCEEEEEECCCCEEECCEEE
Confidence 46788888888888 9999999 99999875 3566778888899889999999
No 159
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.19 E-value=7e-07 Score=88.49 Aligned_cols=40 Identities=20% Similarity=0.257 Sum_probs=37.4
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCccc
Q 015413 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (407)
+|||||||||.+|++||..|++.|++|+|+|++ .+||.+.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~ 42 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCL 42 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCc
Confidence 589999999999999999999999999999998 8898764
No 160
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.19 E-value=1.6e-06 Score=89.73 Aligned_cols=38 Identities=13% Similarity=0.181 Sum_probs=35.5
Q ss_pred CcccEEEECCChhHHHHHHHHhh-CCCeEEEEccCCCCC
Q 015413 21 TAFDLIVIGTGLPESVISAAASA-SGKSVLHLDPNPFYG 58 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~-~G~~VlvlE~~~~~G 58 (407)
.++||||||||++||++|+.|++ .|.+|+|||+++..+
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~ 69 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPM 69 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCC
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 46899999999999999999999 999999999998764
No 161
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.19 E-value=9.7e-07 Score=85.30 Aligned_cols=35 Identities=17% Similarity=0.209 Sum_probs=33.3
Q ss_pred ccEEEECCChhHHHHHHHHhhC--CCeEEEEccCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFY 57 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~--G~~VlvlE~~~~~ 57 (407)
.||||||||++||++|..|+++ |++|+|+|+++.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 3899999999999999999999 9999999999877
No 162
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.18 E-value=1.1e-06 Score=81.93 Aligned_cols=39 Identities=15% Similarity=0.382 Sum_probs=35.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCccc
Q 015413 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (407)
+|||+|||||++||+||..|++.|++|+|+|+ ++||.+.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~--~~gG~~~ 39 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGE--RFGGQIL 39 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECS--STTGGGG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeC--CCCceec
Confidence 48999999999999999999999999999986 5788765
No 163
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.18 E-value=1.9e-06 Score=89.60 Aligned_cols=42 Identities=26% Similarity=0.411 Sum_probs=39.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCccc
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (407)
..+||||||||.+|+.||..|++.|++|+|+|+++++||.+.
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~ 413 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFN 413 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeee
Confidence 458999999999999999999999999999999999999764
No 164
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.17 E-value=6.4e-07 Score=89.87 Aligned_cols=50 Identities=10% Similarity=0.123 Sum_probs=41.9
Q ss_pred hHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 015413 280 ELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (407)
Q Consensus 280 ~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (407)
++.+.+.+.+++.|.+|+++++|++|..+ +++ +.|++.+|+++.||.||+
T Consensus 224 ~~~~~l~~~l~~~GV~i~~~~~V~~i~~~--~~~-v~v~~~~g~~i~aD~Vv~ 273 (499)
T 1xdi_A 224 DAALVLEESFAERGVRLFKNARAASVTRT--GAG-VLVTMTDGRTVEGSHALM 273 (499)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEEC--SSS-EEEEETTSCEEEESEEEE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEe--CCE-EEEEECCCcEEEcCEEEE
Confidence 57788888888999999999999999875 444 467778888999999994
No 165
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.16 E-value=7.2e-07 Score=91.47 Aligned_cols=40 Identities=20% Similarity=0.179 Sum_probs=36.5
Q ss_pred CcccEEEECCChhHHHHHHHHhhCC--CeEEEEccCCCCCCc
Q 015413 21 TAFDLIVIGTGLPESVISAAASASG--KSVLHLDPNPFYGSH 60 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G--~~VlvlE~~~~~GG~ 60 (407)
.++||||||+|++||+||+.|+++| .+|+||||....+|.
T Consensus 4 ~~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~ 45 (602)
T 1kf6_A 4 FQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSH 45 (602)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSG
T ss_pred ccCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCCh
Confidence 3589999999999999999999999 999999999877664
No 166
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.16 E-value=1.5e-06 Score=74.52 Aligned_cols=34 Identities=29% Similarity=0.393 Sum_probs=32.6
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
+|||+|||||++|+.+|..|++.|++|+++|+++
T Consensus 1 ~~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 1 MWDVIVVGGGPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 3799999999999999999999999999999987
No 167
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.15 E-value=4.3e-07 Score=73.25 Aligned_cols=56 Identities=4% Similarity=-0.100 Sum_probs=48.1
Q ss_pred cEEEcCEEEEC-CCCCCCCCCccchhhhhhhhhhhcccCCCceEEEEEEEeCCCCCCCC
Q 015413 323 QDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPDL 380 (407)
Q Consensus 323 ~~i~Ad~VI~~-p~~~~~~~~~~~~p~lp~~~~~~~~~~~~g~~~k~i~i~~~p~~~~~ 380 (407)
++++||+||++ |..++.. +.|+|+||+.+.+..++..||.+.|+++.|++|||++.
T Consensus 4 ~~~~Ad~VIvTvP~~vL~~--I~F~P~LP~~k~~Ai~~l~~g~~~Kv~l~f~~~FW~~~ 60 (130)
T 2e1m_B 4 QTWTGDLAIVTIPFSSLRF--VKVTPPFSYKKRRAVIETHYDQATKVLLEFSRRWWEFT 60 (130)
T ss_dssp EEEEESEEEECSCHHHHTT--SEEESCCCHHHHHHHHHCCEECEEEEEEEESSCGGGCC
T ss_pred eEEEcCEEEEcCCHHHHhc--CcCCCCCCHHHHHHHHhCCCcceeEEEEEECCCCCCCC
Confidence 46899999964 6666676 56899999999998889999999999999999999654
No 168
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.15 E-value=1.5e-06 Score=86.54 Aligned_cols=36 Identities=22% Similarity=0.366 Sum_probs=33.6
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCc
Q 015413 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (407)
Q Consensus 24 DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~ 60 (407)
||||||+|++||+||..|+++|++|+|+||. ..||.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~ 36 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGS 36 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCch
Confidence 8999999999999999999999999999999 66664
No 169
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.15 E-value=1e-06 Score=88.42 Aligned_cols=53 Identities=8% Similarity=0.018 Sum_probs=42.9
Q ss_pred chHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcE-EEcCEEEEC
Q 015413 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQD-ILSHKLVLD 333 (407)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~-i~Ad~VI~~ 333 (407)
.++.+.+.+.+++.|.++++++.|++|..+ +++. +.|++++|++ +.||.||+.
T Consensus 217 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~~-~~v~~~~g~~~~~~D~vi~a 270 (500)
T 1onf_A 217 ESVINVLENDMKKNNINIVTFADVVEIKKV-SDKN-LSIHLSDGRIYEHFDHVIYC 270 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEES-STTC-EEEEETTSCEEEEESEEEEC
T ss_pred hhhHHHHHHHHHhCCCEEEECCEEEEEEEc-CCce-EEEEECCCcEEEECCEEEEC
Confidence 467788888888999999999999999864 1333 4677889988 999999953
No 170
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.15 E-value=1e-06 Score=89.08 Aligned_cols=52 Identities=8% Similarity=0.004 Sum_probs=44.2
Q ss_pred cchHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 015413 278 QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (407)
Q Consensus 278 ~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (407)
-.++++.+.+..+..|..+++++.|+++... ++. +.|.+.+++++.+|.|++
T Consensus 262 D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~--~~~-~~v~~~~~~~~~~D~vLv 313 (542)
T 4b1b_A 262 DQQCAVKVKLYMEEQGVMFKNGILPKKLTKM--DDK-ILVEFSDKTSELYDTVLY 313 (542)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEEE--TTE-EEEEETTSCEEEESEEEE
T ss_pred chhHHHHHHHHHHhhcceeecceEEEEEEec--CCe-EEEEEcCCCeEEEEEEEE
Confidence 4578888889899999999999999999886 554 467788899999999984
No 171
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.14 E-value=1.2e-06 Score=88.41 Aligned_cols=36 Identities=22% Similarity=0.406 Sum_probs=32.4
Q ss_pred CcccEEEECCChhHHHHHHHHhh-CCCeEEEEccCCC
Q 015413 21 TAFDLIVIGTGLPESVISAAASA-SGKSVLHLDPNPF 56 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~-~G~~VlvlE~~~~ 56 (407)
.+||+||||+|.+|+++|.+|++ .|++|+|||+..+
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 36999999999999999999998 6899999999654
No 172
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.13 E-value=1.7e-06 Score=88.07 Aligned_cols=37 Identities=16% Similarity=0.353 Sum_probs=33.9
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCC-CeEEEEccCCC
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASG-KSVLHLDPNPF 56 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G-~~VlvlE~~~~ 56 (407)
..+||+||||||.+||++|.+|++.| .+|+||||...
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 35699999999999999999999998 69999999765
No 173
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=98.13 E-value=1.6e-06 Score=88.03 Aligned_cols=38 Identities=29% Similarity=0.434 Sum_probs=34.5
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCC
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~ 57 (407)
..+||+||||+|.+|+++|.+|+++|++|+|||+....
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~ 42 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPS 42 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 35699999999999999999999999999999998753
No 174
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.09 E-value=1.8e-06 Score=93.33 Aligned_cols=42 Identities=29% Similarity=0.377 Sum_probs=40.0
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCccc
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (407)
..+||||||+|.+||+||..|++.|++|+|+|+++++||.+.
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~ 168 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL 168 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG
T ss_pred cCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec
Confidence 468999999999999999999999999999999999999887
No 175
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.08 E-value=2e-06 Score=85.80 Aligned_cols=50 Identities=8% Similarity=0.089 Sum_probs=40.0
Q ss_pred chHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 015413 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (407)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (407)
.++.+.+.+.++..|.++++++.|++|.. ++++..|.+ +++++.||.||+
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~---~~~v~~v~~-~~~~i~~D~vi~ 276 (480)
T 3cgb_A 227 GDMAEYIYKEADKHHIEILTNENVKAFKG---NERVEAVET-DKGTYKADLVLV 276 (480)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEE---SSBEEEEEE-TTEEEECSEEEE
T ss_pred HHHHHHHHHHHHHcCcEEEcCCEEEEEEc---CCcEEEEEE-CCCEEEcCEEEE
Confidence 46778888888899999999999999975 345556765 456899999994
No 176
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.07 E-value=2.6e-06 Score=88.08 Aligned_cols=52 Identities=15% Similarity=0.161 Sum_probs=40.6
Q ss_pred chHHHHHHHHHHhc-Cc-EEEeCCceeEEEEecCCC---cEEEEEe---CCCc--EEEcCEEEE
Q 015413 279 GELPQAFCRRAAVK-GC-LYVLRMPVISLLTDQNSG---SYKGVRL---ASGQ--DILSHKLVL 332 (407)
Q Consensus 279 ~~l~~al~r~~~~~-Gg-~i~l~~~V~~I~~~~~~g---~~~gV~~---~~G~--~i~Ad~VI~ 332 (407)
..+...|.+.++.. |+ +|+.++.|++|..+ ++ +++||.. .+|+ +++|+.||+
T Consensus 151 ~~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~--~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVl 212 (643)
T 1jnr_A 151 ESYKPIIAEAAKMAVGEENIYERVFIFELLKD--NNDPNAVAGAVGFSVREPKFYVFKAKAVIL 212 (643)
T ss_dssp TTHHHHHHHHHHHHHCGGGEECSEEEEEEEEC--TTCTTBEEEEEEEESSSSCEEEEECSEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEecCEEEEEEEc--CCccceeEEEEEEEecCCcEEEEEcCEEEE
Confidence 35667777777776 99 99999999999986 55 8888764 4565 589999994
No 177
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.05 E-value=2.3e-06 Score=86.45 Aligned_cols=51 Identities=10% Similarity=0.210 Sum_probs=42.0
Q ss_pred chHHHHHHHHHHh-cCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEE
Q 015413 279 GELPQAFCRRAAV-KGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLV 331 (407)
Q Consensus 279 ~~l~~al~r~~~~-~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI 331 (407)
..+.+.|.+.++. .|++++.+ .|++|..+ +++.+++|++.+|++++||.||
T Consensus 175 ~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~-~~g~~~~v~~~~g~~i~ad~vV 226 (526)
T 2pyx_A 175 AKFSQLLTEHCTQKLGVTHIRD-HVSQIINN-QHGDIEKLITKQNGEISGQLFI 226 (526)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEC-CEEEEEEC-TTSCEEEEEESSSCEEECSEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEEe-EEEEEEec-CCCcEEEEEECCCCEEEcCEEE
Confidence 4577788888888 89999999 59999876 3566668888888889999999
No 178
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.04 E-value=3.3e-06 Score=85.17 Aligned_cols=40 Identities=15% Similarity=0.372 Sum_probs=36.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCccc
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (407)
..+||+|||||.+|++||..|+++|++|+|+|+ ++||.+.
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~~~ 250 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQVL 250 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGGGT
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCccc
Confidence 469999999999999999999999999999996 5888765
No 179
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=98.04 E-value=2.1e-06 Score=86.91 Aligned_cols=38 Identities=21% Similarity=0.383 Sum_probs=34.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (407)
.+||+||||+|.+|+++|.+|++ |++|+|||+....++
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~~~ 62 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLPTA 62 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCGGG
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCcCC
Confidence 46999999999999999999999 999999999876544
No 180
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.04 E-value=2.8e-06 Score=83.92 Aligned_cols=42 Identities=10% Similarity=0.097 Sum_probs=35.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhC--CCeEEEEccCCCCCCcc
Q 015413 20 PTAFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYGSHF 61 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~--G~~VlvlE~~~~~GG~~ 61 (407)
|+++||||||||.+||+||..|++. |++|+|+|+++++|+..
T Consensus 1 M~~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~ 44 (449)
T 3kd9_A 1 MSLKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAP 44 (449)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC---
T ss_pred CCcCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCC
Confidence 3458999999999999999999998 88999999999887643
No 181
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.04 E-value=2.8e-06 Score=86.97 Aligned_cols=49 Identities=24% Similarity=0.201 Sum_probs=41.0
Q ss_pred chHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 015413 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (407)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (407)
.++.+.+.+.++..|.+++++++|++|..+ ++ +|++.+|+++.||.||+
T Consensus 228 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~---~v~~~~g~~i~~D~Vi~ 276 (588)
T 3ics_A 228 YEMAAYVHEHMKNHDVELVFEDGVDALEEN--GA---VVRLKSGSVIQTDMLIL 276 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEGG--GT---EEEETTSCEEECSEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEECCeEEEEecC--CC---EEEECCCCEEEcCEEEE
Confidence 467788888888999999999999999753 33 46778999999999994
No 182
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=98.04 E-value=2.1e-06 Score=85.00 Aligned_cols=43 Identities=14% Similarity=0.121 Sum_probs=38.9
Q ss_pred CCcccEEEECCChhHHHHHHHHhh-C------CCeEEEEccCCCCCCccc
Q 015413 20 PTAFDLIVIGTGLPESVISAAASA-S------GKSVLHLDPNPFYGSHFS 62 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~-~------G~~VlvlE~~~~~GG~~~ 62 (407)
|..+||+|||||.+|+.||..|++ . |++|+|+|+++.+||.++
T Consensus 1 m~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~ 50 (456)
T 1lqt_A 1 MRPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVR 50 (456)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHH
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccc
Confidence 346899999999999999999999 7 999999999999998764
No 183
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.02 E-value=2.5e-06 Score=84.90 Aligned_cols=55 Identities=11% Similarity=0.123 Sum_probs=45.1
Q ss_pred CcchHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECC
Q 015413 277 GQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDP 334 (407)
Q Consensus 277 G~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~p 334 (407)
-..++.+.+.+.+++.|.+++++++|++|..+ ++++ .|++.+|+++.||.||+..
T Consensus 200 ~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v-~v~~~~g~~i~aD~Vv~a~ 254 (472)
T 3iwa_A 200 TSKSLSQMLRHDLEKNDVVVHTGEKVVRLEGE--NGKV-ARVITDKRTLDADLVILAA 254 (472)
T ss_dssp SCHHHHHHHHHHHHHTTCEEECSCCEEEEEES--SSBE-EEEEESSCEEECSEEEECS
T ss_pred cCHHHHHHHHHHHHhcCCEEEeCCEEEEEEcc--CCeE-EEEEeCCCEEEcCEEEECC
Confidence 34677888888889999999999999999874 5664 4777899999999999543
No 184
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.00 E-value=2.3e-06 Score=85.95 Aligned_cols=51 Identities=22% Similarity=0.255 Sum_probs=43.4
Q ss_pred chHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEE
Q 015413 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLV 331 (407)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI 331 (407)
..+.+.|.+.+...|++++.+ .|++|..+ +++.+++|++.+|++++||.||
T Consensus 173 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~-~~~~~~~v~~~~g~~~~ad~vV 223 (511)
T 2weu_A 173 DEVARYLSEYAIARGVRHVVD-DVQHVGQD-ERGWISGVHTKQHGEISGDLFV 223 (511)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEEC-TTSCEEEEEESSSCEEECSEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEC-eEeEEEEc-CCCCEEEEEECCCCEEEcCEEE
Confidence 467788888888899999999 99999885 3566778888889899999999
No 185
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.99 E-value=3.2e-06 Score=87.77 Aligned_cols=45 Identities=16% Similarity=0.231 Sum_probs=37.9
Q ss_pred CcccEEEECCChhHHHHHHHHhh-----CCCeEEEEccCCCC--CCcccccc
Q 015413 21 TAFDLIVIGTGLPESVISAAASA-----SGKSVLHLDPNPFY--GSHFSSLS 65 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~-----~G~~VlvlE~~~~~--GG~~~t~~ 65 (407)
.++||+|||||++||++|+.|++ .|.+|+|+|+++.. .|+...+.
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~ 58 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQ 58 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEEC
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEC
Confidence 36899999999999999999999 99999999998764 45544443
No 186
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.98 E-value=4.3e-06 Score=90.98 Aligned_cols=41 Identities=10% Similarity=0.200 Sum_probs=38.5
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCC-eEEEEccCCCCCCcc
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNPFYGSHF 61 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~-~VlvlE~~~~~GG~~ 61 (407)
..+||+|||||.+||+||..|++.|+ +|+|+|+++++||..
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~ 227 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLS 227 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccc
Confidence 46899999999999999999999999 799999999999974
No 187
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.98 E-value=4.6e-06 Score=84.86 Aligned_cols=38 Identities=24% Similarity=0.375 Sum_probs=34.0
Q ss_pred CCCCcccEEEECCChhHHHHHHHHhhC-CCeEEEEccCC
Q 015413 18 IEPTAFDLIVIGTGLPESVISAAASAS-GKSVLHLDPNP 55 (407)
Q Consensus 18 ~~~~~~DVvVIGaGl~GL~aA~~La~~-G~~VlvlE~~~ 55 (407)
+...+||+||||||.+||++|.+|++. |.+|+||||..
T Consensus 15 ~~~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 15 VSGRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp TTTCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred cCCCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 344579999999999999999999975 89999999976
No 188
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.96 E-value=5e-06 Score=85.29 Aligned_cols=35 Identities=31% Similarity=0.334 Sum_probs=32.5
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccC
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~ 54 (407)
...|||+|||||.+||+||..|++.|++|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 34699999999999999999999999999999983
No 189
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.94 E-value=4.5e-06 Score=82.78 Aligned_cols=42 Identities=10% Similarity=-0.034 Sum_probs=38.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhCC--CeEEEEccCCCCCCccc
Q 015413 21 TAFDLIVIGTGLPESVISAAASASG--KSVLHLDPNPFYGSHFS 62 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G--~~VlvlE~~~~~GG~~~ 62 (407)
..+||+|||+|++|+.||..|++.| ++|+|+|+++++||+++
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~ 48 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVR 48 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceee
Confidence 3579999999999999999999999 99999999999998764
No 190
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.93 E-value=6.6e-06 Score=82.55 Aligned_cols=39 Identities=23% Similarity=0.335 Sum_probs=35.8
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCC
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~G 58 (407)
+.+||+||||+|.+|+++|.+|++.|++|+|||+..+.+
T Consensus 3 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 3 GGYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 457999999999999999999999999999999998766
No 191
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.89 E-value=6.9e-06 Score=81.22 Aligned_cols=51 Identities=6% Similarity=0.142 Sum_probs=42.3
Q ss_pred cchHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 015413 278 QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (407)
Q Consensus 278 ~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (407)
-.++.+.+.+.+++.|.+++++++|++|..+ ++++ .|++.+| ++.||.||+
T Consensus 188 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v-~v~~~~g-~i~aD~Vv~ 238 (452)
T 3oc4_A 188 DKEMVAEVQKSLEKQAVIFHFEETVLGIEET--ANGI-VLETSEQ-EISCDSGIF 238 (452)
T ss_dssp CHHHHHHHHHHHHTTTEEEEETCCEEEEEEC--SSCE-EEEESSC-EEEESEEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEeCCEEEEEEcc--CCeE-EEEECCC-EEEeCEEEE
Confidence 3567788888889999999999999999865 5555 7877666 899999994
No 192
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.88 E-value=6.7e-06 Score=80.74 Aligned_cols=39 Identities=15% Similarity=0.295 Sum_probs=36.4
Q ss_pred ccEEEECCChhHHHHHHHHhh--CCCeEEEEccCCCCCCcc
Q 015413 23 FDLIVIGTGLPESVISAAASA--SGKSVLHLDPNPFYGSHF 61 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~--~G~~VlvlE~~~~~GG~~ 61 (407)
.||||||||++||+||..|++ .|++|+|+|++++.|+..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~ 43 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTP 43 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGG
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCC
Confidence 599999999999999999999 899999999999988754
No 193
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.87 E-value=1.2e-05 Score=80.67 Aligned_cols=38 Identities=16% Similarity=0.236 Sum_probs=35.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCC
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~ 57 (407)
+.+||+||||+|.+|+++|.+|++.|++|+|||+....
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~ 46 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRSW 46 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 45799999999999999999999999999999998654
No 194
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.86 E-value=7.2e-06 Score=83.24 Aligned_cols=38 Identities=29% Similarity=0.426 Sum_probs=34.8
Q ss_pred cccEEEECCChhHHHHHHHHhh-CCCeEEEEccCCCCCC
Q 015413 22 AFDLIVIGTGLPESVISAAASA-SGKSVLHLDPNPFYGS 59 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~-~G~~VlvlE~~~~~GG 59 (407)
+||+||||+|.+|+++|.+|++ .|++|+||||....++
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~~~ 40 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSDEN 40 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCCTT
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcccC
Confidence 5999999999999999999999 7999999999877643
No 195
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.86 E-value=8.9e-06 Score=80.39 Aligned_cols=52 Identities=19% Similarity=0.229 Sum_probs=43.2
Q ss_pred cchHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 015413 278 QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (407)
Q Consensus 278 ~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (407)
-.++.+.+.+.+++.|.+++++++|++|..+ ++++..|.+ +|+++.||.||+
T Consensus 190 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~~v~~v~~-~g~~i~~D~vv~ 241 (452)
T 2cdu_A 190 DKEFTDILAKDYEAHGVNLVLGSKVAAFEEV--DDEIITKTL-DGKEIKSDIAIL 241 (452)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESSCEEEEEEE--TTEEEEEET-TSCEEEESEEEE
T ss_pred hhhHHHHHHHHHHHCCCEEEcCCeeEEEEcC--CCeEEEEEe-CCCEEECCEEEE
Confidence 4567888888889999999999999999864 566656764 888999999994
No 196
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.86 E-value=1.3e-05 Score=78.84 Aligned_cols=54 Identities=9% Similarity=0.039 Sum_probs=45.1
Q ss_pred cchHHHHHHHHHHhcCcEEEeCCceeEEEE--ecCCCcEEEEEeCCCcEEEcCEEEEC
Q 015413 278 QGELPQAFCRRAAVKGCLYVLRMPVISLLT--DQNSGSYKGVRLASGQDILSHKLVLD 333 (407)
Q Consensus 278 ~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~--~~~~g~~~gV~~~~G~~i~Ad~VI~~ 333 (407)
..++.+.+.+.+++.|.++++++.|++|.. + ++++.+|++.+|+++.||.||+.
T Consensus 190 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~--~~~v~~v~~~~G~~i~~D~Vv~a 245 (431)
T 1q1r_A 190 APPVSAFYEHLHREAGVDIRTGTQVCGFEMSTD--QQKVTAVLCEDGTRLPADLVIAG 245 (431)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCCEEEEEECTT--TCCEEEEEETTSCEEECSEEEEC
T ss_pred hHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccC--CCcEEEEEeCCCCEEEcCEEEEC
Confidence 346778888888899999999999999986 3 56666888889999999999953
No 197
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.84 E-value=6.5e-06 Score=80.19 Aligned_cols=50 Identities=14% Similarity=0.090 Sum_probs=40.5
Q ss_pred chHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECCC
Q 015413 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPS 335 (407)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~p~ 335 (407)
..+.+.+.+.+++.|.++++++.|++|.. + +|++++|+++.||.||+.+.
T Consensus 218 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~----~---~v~~~~g~~~~~D~vi~a~G 267 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKLVHNFKIKEIRE----H---EIVDEKGNTIPADITILLPP 267 (409)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEECS----S---EEEETTSCEEECSEEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEcCCceEEECC----C---eEEECCCCEEeeeEEEECCC
Confidence 46778888888899999999999999852 2 36678999999999995443
No 198
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.84 E-value=1.1e-05 Score=80.65 Aligned_cols=52 Identities=17% Similarity=0.171 Sum_probs=43.2
Q ss_pred chHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 015413 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (407)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~ 333 (407)
..+.+.+.+.+++.|.++++++.|++|..+ +++ +.|++++|+++.||.||+.
T Consensus 226 ~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~--~~~-~~v~l~dG~~i~aD~Vv~a 277 (493)
T 1m6i_A 226 EYLSNWTMEKVRREGVKVMPNAIVQSVGVS--SGK-LLIKLKDGRKVETDHIVAA 277 (493)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCCEEEEEEE--TTE-EEEEETTSCEEEESEEEEC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEec--CCe-EEEEECCCCEEECCEEEEC
Confidence 357777888888999999999999999865 454 4788889999999999953
No 199
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.82 E-value=1.2e-05 Score=77.62 Aligned_cols=52 Identities=17% Similarity=0.091 Sum_probs=43.3
Q ss_pred chHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 015413 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (407)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~ 333 (407)
.++.+.+.+.++..|.+++++++|++|..+ ++. +.|++++|++++||.||+.
T Consensus 187 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~--~~~-~~v~~~~g~~i~~d~vv~a 238 (384)
T 2v3a_A 187 PAAAKAVQAGLEGLGVRFHLGPVLASLKKA--GEG-LEAHLSDGEVIPCDLVVSA 238 (384)
T ss_dssp HHHHHHHHHHHHTTTCEEEESCCEEEEEEE--TTE-EEEEETTSCEEEESEEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEec--CCE-EEEEECCCCEEECCEEEEC
Confidence 457788888888999999999999999875 443 5788889999999999943
No 200
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.82 E-value=1.2e-05 Score=82.04 Aligned_cols=38 Identities=21% Similarity=0.366 Sum_probs=35.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhh-CCCeEEEEccCCCC
Q 015413 20 PTAFDLIVIGTGLPESVISAAASA-SGKSVLHLDPNPFY 57 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~-~G~~VlvlE~~~~~ 57 (407)
+.+||+||||+|.+|+++|.+|++ .|++|+|||+....
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 457999999999999999999999 89999999998654
No 201
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.78 E-value=1.8e-05 Score=80.14 Aligned_cols=39 Identities=28% Similarity=0.398 Sum_probs=35.5
Q ss_pred CcccEEEECCChhHHHHHHHHhhC-CCeEEEEccCCCCCC
Q 015413 21 TAFDLIVIGTGLPESVISAAASAS-GKSVLHLDPNPFYGS 59 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~-G~~VlvlE~~~~~GG 59 (407)
..||+||||+|.+|+++|.+|+++ |++|+|||+.....+
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~~~ 51 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDRG 51 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCCTT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcCCC
Confidence 469999999999999999999998 999999999877643
No 202
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.78 E-value=1.3e-05 Score=80.21 Aligned_cols=50 Identities=10% Similarity=0.160 Sum_probs=40.2
Q ss_pred chHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 015413 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (407)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (407)
.++.+.+.+.+++.|.++++++.|++|.. ++++..|.+ +|+++.||.||+
T Consensus 236 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~---~~~v~~v~~-~g~~i~~D~Vi~ 285 (490)
T 2bc0_A 236 RDLTDLMAKNMEEHGIQLAFGETVKEVAG---NGKVEKIIT-DKNEYDVDMVIL 285 (490)
T ss_dssp HHHHHHHHHHHHTTTCEEEETCCEEEEEC---SSSCCEEEE-SSCEEECSEEEE
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEc---CCcEEEEEE-CCcEEECCEEEE
Confidence 46777888888899999999999999974 344445665 788999999994
No 203
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.78 E-value=1.4e-05 Score=78.91 Aligned_cols=51 Identities=10% Similarity=0.038 Sum_probs=40.1
Q ss_pred chHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 015413 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (407)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~ 333 (407)
.++.+.+.+.+++.|.++++++.|++|.. +++++.|.+ +|++++||.||+.
T Consensus 191 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~---~~~v~~v~~-~~~~i~~d~vi~a 241 (447)
T 1nhp_A 191 KEFTDVLTEEMEANNITIATGETVERYEG---DGRVQKVVT-DKNAYDADLVVVA 241 (447)
T ss_dssp HHHHHHHHHHHHTTTEEEEESCCEEEEEC---SSBCCEEEE-SSCEEECSEEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEc---cCcEEEEEE-CCCEEECCEEEEC
Confidence 46778888888889999999999999975 344445665 6678999999943
No 204
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.74 E-value=1.9e-05 Score=76.93 Aligned_cols=49 Identities=22% Similarity=0.243 Sum_probs=40.5
Q ss_pred chHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECC
Q 015413 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDP 334 (407)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~p 334 (407)
.++.+.+.+.+++.|.++++++.|++|. + + +|++.+|+++.||.||+..
T Consensus 187 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~--~----~v~~~~g~~i~~D~vi~a~ 235 (408)
T 2gqw_A 187 ATLADFVARYHAAQGVDLRFERSVTGSV-D--G----VVLLDDGTRIAADMVVVGI 235 (408)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEE-T--T----EEEETTSCEEECSEEEECS
T ss_pred HHHHHHHHHHHHHcCcEEEeCCEEEEEE-C--C----EEEECCCCEEEcCEEEECc
Confidence 4577788888889999999999999997 4 3 5667899999999999543
No 205
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.70 E-value=2.2e-05 Score=77.19 Aligned_cols=36 Identities=17% Similarity=0.382 Sum_probs=33.8
Q ss_pred cccEEEECCChhHHHHHHHHhh---CCCeEEEEccCCCC
Q 015413 22 AFDLIVIGTGLPESVISAAASA---SGKSVLHLDPNPFY 57 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~---~G~~VlvlE~~~~~ 57 (407)
+.||||||||++|++||..|++ .|++|+|+|++++.
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~ 42 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYF 42 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCC
Confidence 4799999999999999999999 89999999999875
No 206
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.69 E-value=2.7e-05 Score=74.79 Aligned_cols=35 Identities=17% Similarity=0.225 Sum_probs=32.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~G 58 (407)
-||||||||.+|++||..|++.| +|+|+|+++..+
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~ 43 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPY 43 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCC
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCc
Confidence 59999999999999999999999 999999998753
No 207
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.67 E-value=2.6e-05 Score=79.28 Aligned_cols=36 Identities=11% Similarity=0.202 Sum_probs=34.2
Q ss_pred ccEEEECCChhHHHHHHHHhhC--CCeEEEEccCCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYG 58 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~--G~~VlvlE~~~~~G 58 (407)
.||+|||||++||+||..|++. |++|+|+|+++++|
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~ 39 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVS 39 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcc
Confidence 5899999999999999999998 89999999999987
No 208
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.65 E-value=3.6e-05 Score=75.01 Aligned_cols=52 Identities=12% Similarity=0.145 Sum_probs=43.4
Q ss_pred chHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 015413 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (407)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~ 333 (407)
.++.+.+.+.+++.|.++++++.|++|..+ +++.+|++++|+++.||.||+.
T Consensus 185 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~---~~~~~v~~~dg~~i~aD~Vv~a 236 (410)
T 3ef6_A 185 RRIGAWLRGLLTELGVQVELGTGVVGFSGE---GQLEQVMASDGRSFVADSALIC 236 (410)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEECS---SSCCEEEETTSCEEECSEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEecc---CcEEEEEECCCCEEEcCEEEEe
Confidence 456777888888899999999999999753 3556788899999999999953
No 209
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.47 E-value=2.9e-05 Score=77.76 Aligned_cols=42 Identities=17% Similarity=0.155 Sum_probs=31.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcc
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~ 61 (407)
.+.|||||||+|.+||++|+.|.++|...+++|+.+..|+..
T Consensus 37 ~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~ 78 (501)
T 4b63_A 37 DELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPK 78 (501)
T ss_dssp TSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCC
T ss_pred CCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcc
Confidence 346999999999999999999998877666666666665543
No 210
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.44 E-value=8.3e-05 Score=74.45 Aligned_cols=37 Identities=11% Similarity=0.273 Sum_probs=33.8
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (407)
.++..|||||||.+|+.+|..|++.+++|+|+|++++
T Consensus 40 ~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 40 SDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp CSSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCC
Confidence 3456899999999999999999999999999999975
No 211
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.39 E-value=0.00013 Score=70.43 Aligned_cols=38 Identities=11% Similarity=0.248 Sum_probs=35.1
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 015413 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (407)
...|||||||++|++||..|++.|.+|+|+|++++++.
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y 46 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPY 46 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCB
T ss_pred CCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCc
Confidence 45799999999999999999888999999999999874
No 212
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=97.34 E-value=0.00011 Score=71.13 Aligned_cols=37 Identities=19% Similarity=0.316 Sum_probs=32.5
Q ss_pred cEEEECCChhHHHHHHHHhhCC--CeEEEEccCCCCCCc
Q 015413 24 DLIVIGTGLPESVISAAASASG--KSVLHLDPNPFYGSH 60 (407)
Q Consensus 24 DVvVIGaGl~GL~aA~~La~~G--~~VlvlE~~~~~GG~ 60 (407)
.|||||||.+|++||.+|++.| .+|+|+|+++....+
T Consensus 4 kVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~ 42 (401)
T 3vrd_B 4 KVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTC 42 (401)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECS
T ss_pred EEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCc
Confidence 6999999999999999999877 489999999875444
No 213
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.29 E-value=0.00015 Score=71.32 Aligned_cols=48 Identities=10% Similarity=0.142 Sum_probs=39.4
Q ss_pred cchHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 015413 278 QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (407)
Q Consensus 278 ~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (407)
-.++.+.+.+..++.|.++++++.|+++. .. .|++++|+++.||.||+
T Consensus 187 d~~~~~~~~~~l~~~gV~i~~~~~v~~~~----~~---~v~~~~g~~~~~D~vl~ 234 (437)
T 4eqs_A 187 DADMNQPILDELDKREIPYRLNEEINAIN----GN---EITFKSGKVEHYDMIIE 234 (437)
T ss_dssp CGGGGHHHHHHHHHTTCCEEESCCEEEEE----TT---EEEETTSCEEECSEEEE
T ss_pred cchhHHHHHHHhhccceEEEeccEEEEec----CC---eeeecCCeEEeeeeEEE
Confidence 35677778888889999999999999874 33 36678999999999994
No 214
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=97.24 E-value=0.00017 Score=70.66 Aligned_cols=34 Identities=15% Similarity=0.313 Sum_probs=31.2
Q ss_pred cEEEECCChhHHHHHHHHhhCC--CeEEEEccCCCC
Q 015413 24 DLIVIGTGLPESVISAAASASG--KSVLHLDPNPFY 57 (407)
Q Consensus 24 DVvVIGaGl~GL~aA~~La~~G--~~VlvlE~~~~~ 57 (407)
.|||||||.+|++||..|++.+ .+|+|+|++++.
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~ 39 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYF 39 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEE
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCC
Confidence 6999999999999999999876 799999999863
No 215
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=96.37 E-value=0.0037 Score=61.33 Aligned_cols=39 Identities=23% Similarity=0.175 Sum_probs=36.0
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCc
Q 015413 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~ 60 (407)
..+++|||+|..|+.+|..|++.|.+|+++|+++++..+
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~ 187 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV 187 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccc
Confidence 368999999999999999999999999999999987764
No 216
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.37 E-value=0.0027 Score=61.14 Aligned_cols=39 Identities=15% Similarity=0.003 Sum_probs=36.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcc
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~ 61 (407)
-+|+|||+|..|+-+|..|++.|.+|+++|+++++..+.
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~ 185 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLERQ 185 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhh
Confidence 369999999999999999999999999999999987664
No 217
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=96.18 E-value=0.0042 Score=57.54 Aligned_cols=36 Identities=17% Similarity=0.085 Sum_probs=33.6
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 015413 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (407)
Q Consensus 24 DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (407)
.|+|||+|..|+-+|..|++.|.+|+++|+++++-.
T Consensus 147 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~~~ 182 (312)
T 4gcm_A 147 RLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRA 182 (312)
T ss_dssp EEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS
T ss_pred EEEEECCCHHHHHHHHHHHhcCCEEEEEecccccCc
Confidence 699999999999999999999999999999988743
No 218
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.17 E-value=0.0068 Score=49.23 Aligned_cols=33 Identities=15% Similarity=0.244 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
-.|+|||.|--|...|..|.+.|++|+++|++.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 369999999999999999999999999999974
No 219
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.13 E-value=0.0054 Score=49.29 Aligned_cols=33 Identities=18% Similarity=0.372 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
..|+|||+|..|...|..|++.|++|+++|++.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999853
No 220
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.07 E-value=0.0061 Score=50.39 Aligned_cols=33 Identities=36% Similarity=0.492 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
..|+|||+|.-|+..|..|++.|++|+++|++.
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999874
No 221
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.95 E-value=0.0056 Score=60.28 Aligned_cols=37 Identities=19% Similarity=0.168 Sum_probs=34.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (407)
-+|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 208 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILP 208 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccc
Confidence 4799999999999999999999999999999999875
No 222
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=95.93 E-value=0.0074 Score=57.85 Aligned_cols=39 Identities=15% Similarity=0.202 Sum_probs=35.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcc
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~ 61 (407)
-+++|||+|..|+-+|..|++.|.+|+++|+++++..+.
T Consensus 146 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~ 184 (384)
T 2v3a_A 146 RRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGL 184 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhcc
Confidence 479999999999999999999999999999999877654
No 223
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=95.88 E-value=0.007 Score=59.70 Aligned_cols=37 Identities=22% Similarity=0.170 Sum_probs=34.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (407)
-+++|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 206 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILP 206 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcccc
Confidence 4799999999999999999999999999999998765
No 224
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.88 E-value=0.0092 Score=49.16 Aligned_cols=34 Identities=18% Similarity=0.184 Sum_probs=31.2
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
.-.++|+|+|-.|...|..|.+.|++|+++|+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 3469999999999999999999999999999863
No 225
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.84 E-value=0.0074 Score=59.30 Aligned_cols=37 Identities=27% Similarity=0.198 Sum_probs=34.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (407)
.+|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 207 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILS 207 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc
Confidence 5799999999999999999999999999999998765
No 226
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=95.82 E-value=0.0077 Score=59.17 Aligned_cols=37 Identities=22% Similarity=0.161 Sum_probs=34.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (407)
-.|+|||+|..|+.+|..|++.|.+|+++|+++++..
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~ 204 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILP 204 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCcccc
Confidence 4699999999999999999999999999999988654
No 227
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=95.82 E-value=0.0088 Score=59.13 Aligned_cols=38 Identities=24% Similarity=0.316 Sum_probs=35.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCc
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~ 60 (407)
-.++|||+|..|+-+|..|++.|.+|+++|+++++...
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~ 221 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS 221 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc
Confidence 47999999999999999999999999999999998763
No 228
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=95.82 E-value=0.0083 Score=55.83 Aligned_cols=49 Identities=12% Similarity=0.074 Sum_probs=33.6
Q ss_pred CCCCCCCC-CCCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 015413 8 SELPVPPY-PPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (407)
Q Consensus 8 ~~~~~~~~-~~~~~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (407)
++|+.+++ +.....+..|.|||+|.-|...|..|+++|++|++++++..
T Consensus 6 ~~~~~~~~~~~~~~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 6 HHHHHSSGLVPRGSHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp ------------CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred cccccccccCcccccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 45555553 33334456899999999999999999999999999998753
No 229
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.78 E-value=0.0077 Score=57.46 Aligned_cols=37 Identities=16% Similarity=0.259 Sum_probs=34.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (407)
-+++|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 180 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG 180 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc
Confidence 4799999999999999999999999999999998766
No 230
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.76 E-value=0.0097 Score=48.15 Aligned_cols=33 Identities=30% Similarity=0.488 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
..++|+|+|.-|...|..|+++|++|+++|++.
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 469999999999999999999999999999863
No 231
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.75 E-value=0.009 Score=50.78 Aligned_cols=34 Identities=18% Similarity=0.233 Sum_probs=31.2
Q ss_pred cccEEEECCChhHHHHHHHHhhC-CCeEEEEccCC
Q 015413 22 AFDLIVIGTGLPESVISAAASAS-GKSVLHLDPNP 55 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~-G~~VlvlE~~~ 55 (407)
.-.|+|||+|..|...|..|.+. |++|+++|++.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 45799999999999999999999 99999999864
No 232
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=95.62 E-value=0.011 Score=57.09 Aligned_cols=38 Identities=24% Similarity=0.355 Sum_probs=35.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCc
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~ 60 (407)
-.|+|||+|..|+-+|..|++.|.+|+++|+++++..+
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~ 183 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSR 183 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc
Confidence 47999999999999999999999999999999988765
No 233
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=95.58 E-value=0.011 Score=54.66 Aligned_cols=35 Identities=20% Similarity=0.221 Sum_probs=32.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~ 57 (407)
..|+|||+|..|+-+|..|++.|.+|+++|+.+..
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~ 187 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAF 187 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CeEEEECCChHHHHHHHHHHHhCCeeeeecccccc
Confidence 46999999999999999999999999999987653
No 234
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=95.57 E-value=0.011 Score=58.02 Aligned_cols=37 Identities=11% Similarity=0.045 Sum_probs=34.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (407)
-.++|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 204 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLP 204 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhh
Confidence 4699999999999999999999999999999988764
No 235
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=95.36 E-value=0.017 Score=52.98 Aligned_cols=35 Identities=29% Similarity=0.326 Sum_probs=31.9
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
....|.|||+|.-|...|..|+++|++|+++|++.
T Consensus 3 ~~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 3 GITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 34579999999999999999999999999999875
No 236
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.36 E-value=0.017 Score=44.73 Aligned_cols=32 Identities=28% Similarity=0.390 Sum_probs=29.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCC-CeEEEEccC
Q 015413 23 FDLIVIGTGLPESVISAAASASG-KSVLHLDPN 54 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G-~~VlvlE~~ 54 (407)
..|+|+|+|..|...+..|.+.| ++|.+++++
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 46999999999999999999999 999999986
No 237
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=95.35 E-value=0.015 Score=57.39 Aligned_cols=37 Identities=14% Similarity=0.068 Sum_probs=34.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (407)
-.|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~ 203 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLF 203 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcccc
Confidence 3699999999999999999999999999999988754
No 238
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=95.26 E-value=0.011 Score=58.49 Aligned_cols=37 Identities=24% Similarity=0.328 Sum_probs=34.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (407)
.+|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 187 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 223 (480)
T 3cgb_A 187 EDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT 223 (480)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh
Confidence 5799999999999999999999999999999998776
No 239
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=95.25 E-value=0.018 Score=53.17 Aligned_cols=33 Identities=33% Similarity=0.477 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
..|.|||+|.-|...|..|+++|++|+++|++.
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999874
No 240
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=95.17 E-value=0.02 Score=55.83 Aligned_cols=38 Identities=26% Similarity=0.214 Sum_probs=35.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCc
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~ 60 (407)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++..+
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~ 187 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLER 187 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc
Confidence 46999999999999999999999999999999987654
No 241
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=95.16 E-value=0.017 Score=57.23 Aligned_cols=38 Identities=21% Similarity=0.211 Sum_probs=34.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCc
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~ 60 (407)
-.|+|||+|..|+-+|..|++.|.+|+++|+++++-.+
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~ 232 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAG 232 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhh
Confidence 46999999999999999999999999999999987653
No 242
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=95.14 E-value=0.019 Score=56.57 Aligned_cols=37 Identities=19% Similarity=0.249 Sum_probs=34.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (407)
-.|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 215 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGG 215 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSC
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCC
Confidence 4699999999999999999999999999999998865
No 243
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=95.11 E-value=0.019 Score=56.51 Aligned_cols=37 Identities=16% Similarity=0.087 Sum_probs=34.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (407)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 208 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALP 208 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcccc
Confidence 4799999999999999999999999999999998765
No 244
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=95.11 E-value=0.034 Score=52.80 Aligned_cols=47 Identities=17% Similarity=0.218 Sum_probs=37.1
Q ss_pred CCCCCCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 015413 13 PPYPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (407)
Q Consensus 13 ~~~~~~~~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (407)
.+.++-.+.++||||||||++||++|+.|+++|++|+|||+++..+|
T Consensus 8 ~~~~~~~~~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~~~~g 54 (382)
T 1ryi_A 8 MARIRAMKRHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTMGGR 54 (382)
T ss_dssp ------CCSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTTT
T ss_pred HHHhhccCCCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCcc
Confidence 33344345679999999999999999999999999999999975554
No 245
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=95.08 E-value=0.025 Score=55.35 Aligned_cols=34 Identities=15% Similarity=0.179 Sum_probs=31.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (407)
..|.|||+|.-|...|..|+++|++|+++|.+..
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 4699999999999999999999999999999865
No 246
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=95.06 E-value=0.016 Score=57.35 Aligned_cols=37 Identities=16% Similarity=0.108 Sum_probs=34.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (407)
-.++|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~ 222 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ 222 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc
Confidence 4799999999999999999999999999999998765
No 247
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=95.05 E-value=0.022 Score=56.51 Aligned_cols=38 Identities=18% Similarity=0.112 Sum_probs=35.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCc
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~ 60 (407)
-.|+|||+|..|+-+|..|++.|.+|+++|+++++...
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~ 212 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL 212 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc
Confidence 47999999999999999999999999999999998654
No 248
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=95.03 E-value=0.021 Score=55.23 Aligned_cols=38 Identities=24% Similarity=0.274 Sum_probs=34.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCc
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~ 60 (407)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++-.+
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~ 181 (410)
T 3ef6_A 144 TRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVR 181 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchh
Confidence 46999999999999999999999999999999987654
No 249
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=95.02 E-value=0.019 Score=53.46 Aligned_cols=34 Identities=24% Similarity=0.323 Sum_probs=31.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (407)
-.|.|||||.-|..-|..++.+|++|+++|.+..
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~ 40 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 4699999999999999999999999999998653
No 250
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=94.97 E-value=0.024 Score=55.47 Aligned_cols=37 Identities=22% Similarity=0.260 Sum_probs=35.0
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCc
Q 015413 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (407)
Q Consensus 24 DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~ 60 (407)
+++|||+|..|+-+|..|++.|.+|+++|+.+++...
T Consensus 150 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~ 186 (449)
T 3kd9_A 150 NVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRR 186 (449)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh
Confidence 7999999999999999999999999999999987765
No 251
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=94.87 E-value=0.021 Score=53.87 Aligned_cols=36 Identities=11% Similarity=0.048 Sum_probs=29.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~G 58 (407)
-.|+|||+|.+|+-+|..|++.|.+|+++++++++.
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~ 202 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLN 202 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC-----
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCC
Confidence 379999999999999999999999999999988765
No 252
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.86 E-value=0.017 Score=56.91 Aligned_cols=37 Identities=19% Similarity=0.154 Sum_probs=34.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (407)
-.|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~ 214 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVP 214 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc
Confidence 4799999999999999999999999999999998765
No 253
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=94.85 E-value=0.025 Score=51.99 Aligned_cols=36 Identities=14% Similarity=0.083 Sum_probs=33.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~G 58 (407)
..|+|||+|..|+-+|..|++.|.+|+++++++++.
T Consensus 144 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~ 179 (311)
T 2q0l_A 144 KEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR 179 (311)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC
Confidence 479999999999999999999999999999998874
No 254
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=94.79 E-value=0.025 Score=55.86 Aligned_cols=37 Identities=11% Similarity=0.073 Sum_probs=34.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (407)
-.++|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~ 222 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLR 222 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcccc
Confidence 4699999999999999999999999999999988754
No 255
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=94.78 E-value=0.025 Score=53.65 Aligned_cols=39 Identities=15% Similarity=0.157 Sum_probs=32.1
Q ss_pred CCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 17 PIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 17 ~~~~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
+++++...|.|||.|.-|...|..|+++|++|++++++.
T Consensus 17 ~~Mm~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 17 NLYFQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred hhhhcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 456666789999999999999999999999999999874
No 256
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=94.74 E-value=0.031 Score=56.18 Aligned_cols=34 Identities=18% Similarity=0.160 Sum_probs=32.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (407)
-.|+|||+|.+|+-+|..|++.|.+|+|+++.++
T Consensus 179 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 179 RRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred ceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 4799999999999999999999999999999876
No 257
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.73 E-value=0.027 Score=56.07 Aligned_cols=37 Identities=8% Similarity=0.020 Sum_probs=34.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (407)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~ 213 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILR 213 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCT
T ss_pred CeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCc
Confidence 3699999999999999999999999999999998764
No 258
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=94.70 E-value=0.032 Score=53.74 Aligned_cols=40 Identities=25% Similarity=0.270 Sum_probs=36.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCccc
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (407)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++..+..
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~~ 182 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARVV 182 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhcc
Confidence 3699999999999999999999999999999998876543
No 259
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=94.70 E-value=0.025 Score=45.40 Aligned_cols=32 Identities=31% Similarity=0.331 Sum_probs=29.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~ 54 (407)
..|+|+|+|-.|...|..|.+.|++|+++|++
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 35999999999999999999999999999976
No 260
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=94.65 E-value=0.031 Score=50.00 Aligned_cols=37 Identities=22% Similarity=0.287 Sum_probs=31.4
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 19 ~~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
......|.|||+|.-|...|..|+++|++|++.+++.
T Consensus 16 ~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 16 YFQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 3445679999999999999999999999999998864
No 261
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=94.64 E-value=0.029 Score=51.58 Aligned_cols=35 Identities=20% Similarity=0.120 Sum_probs=33.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~ 57 (407)
-.|+|||+|..|+-+|..|++.|.+|+++++++++
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 179 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEM 179 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCccc
Confidence 36999999999999999999999999999999887
No 262
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=94.61 E-value=0.056 Score=52.69 Aligned_cols=41 Identities=27% Similarity=0.294 Sum_probs=36.7
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCC-CeEEEEccCCCCCCc
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASG-KSVLHLDPNPFYGSH 60 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G-~~VlvlE~~~~~GG~ 60 (407)
|.++||||||||++||++|+.|+++| ++|+|||+++.+|+.
T Consensus 21 m~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~~~~~g 62 (448)
T 3axb_A 21 MPRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGHAPGSG 62 (448)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSSSTTCS
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCCCCCCC
Confidence 46799999999999999999999999 999999996666643
No 263
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=94.58 E-value=0.036 Score=54.00 Aligned_cols=34 Identities=29% Similarity=0.371 Sum_probs=31.3
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
+..+.|||.|..||..|..||++|++|+.+|-+.
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 4579999999999999999999999999999764
No 264
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=94.57 E-value=0.032 Score=54.91 Aligned_cols=37 Identities=24% Similarity=0.257 Sum_probs=34.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (407)
-.|+|||+|..|+-+|..|++.|.+|+++|+++++-.
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 213 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR 213 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC
Confidence 4699999999999999999999999999999988654
No 265
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=94.55 E-value=0.036 Score=53.56 Aligned_cols=39 Identities=23% Similarity=0.203 Sum_probs=35.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcc
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~ 61 (407)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++-.+.
T Consensus 153 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~ 191 (415)
T 3lxd_A 153 KNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARV 191 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhh
Confidence 469999999999999999999999999999999886654
No 266
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=94.55 E-value=0.026 Score=55.07 Aligned_cols=38 Identities=11% Similarity=0.135 Sum_probs=35.0
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcc
Q 015413 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (407)
Q Consensus 24 DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~ 61 (407)
.++|||+|..|+-.|..|++.|.+|+++|+.+++....
T Consensus 149 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~ 186 (437)
T 4eqs_A 149 KVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLM 186 (437)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTTS
T ss_pred EEEEECCccchhhhHHHHHhcCCcceeeeeeccccccc
Confidence 69999999999999999999999999999999876543
No 267
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=94.54 E-value=0.032 Score=54.68 Aligned_cols=37 Identities=19% Similarity=0.150 Sum_probs=34.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (407)
-.++|||+|..|+-+|..|++.|.+|+++|+.+++-.
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 186 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLY 186 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTT
T ss_pred CeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhh
Confidence 3699999999999999999999999999999988755
No 268
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=94.53 E-value=0.033 Score=54.84 Aligned_cols=37 Identities=19% Similarity=0.249 Sum_probs=34.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (407)
-.++|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 211 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAP 211 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccc
Confidence 4799999999999999999999999999999998765
No 269
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=94.53 E-value=0.031 Score=52.73 Aligned_cols=35 Identities=26% Similarity=0.301 Sum_probs=31.1
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
....|.|||+|..|...|..|+++|++|++++++.
T Consensus 3 ~~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 3 ESKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 34579999999999999999999999999998863
No 270
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=94.52 E-value=0.035 Score=55.85 Aligned_cols=35 Identities=26% Similarity=0.290 Sum_probs=32.6
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 015413 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (407)
.-.|+|||+|.+|+-+|..|++.|.+|+|+++.++
T Consensus 185 ~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 185 GKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 34799999999999999999999999999999876
No 271
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=94.48 E-value=0.03 Score=55.15 Aligned_cols=37 Identities=11% Similarity=0.037 Sum_probs=33.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (407)
-.|+|||+|.+|+-+|..|++.|.+|+++++++++-+
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~~~ 234 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPMG 234 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCCCC
T ss_pred CEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCCCC
Confidence 3699999999999999999999999999999877533
No 272
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=94.47 E-value=0.034 Score=51.68 Aligned_cols=36 Identities=19% Similarity=0.162 Sum_probs=33.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~G 58 (407)
-.|+|||+|..|+-+|..|++.|.+|+++++++++.
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~ 195 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFR 195 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCC
T ss_pred CeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCC
Confidence 479999999999999999999999999999998863
No 273
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.44 E-value=0.028 Score=49.20 Aligned_cols=32 Identities=13% Similarity=0.234 Sum_probs=30.0
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 24 DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
.|+|||+|--|...|..|.++|++|+++|++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 58999999999999999999999999999863
No 274
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=94.43 E-value=0.038 Score=54.18 Aligned_cols=35 Identities=20% Similarity=0.260 Sum_probs=32.0
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 015413 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (407)
...|.|||.|.+|+++|..|++.|++|++.|++..
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~ 43 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPF 43 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCG
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcc
Confidence 35799999999999999999999999999999763
No 275
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=94.43 E-value=0.039 Score=51.75 Aligned_cols=33 Identities=15% Similarity=0.194 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC-eEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~-~VlvlE~~~ 55 (407)
..|.|||||..|.+.|..|++.|+ +|.++|.+.
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 579999999999999999999998 999999875
No 276
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=94.43 E-value=0.026 Score=56.84 Aligned_cols=35 Identities=14% Similarity=0.114 Sum_probs=32.6
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 015413 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (407)
...|+|||+|.+|+-+|..|++.|.+|+|+++.++
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 34799999999999999999999999999999876
No 277
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=94.42 E-value=0.035 Score=51.22 Aligned_cols=36 Identities=17% Similarity=0.074 Sum_probs=33.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~G 58 (407)
-.|+|||+|..|+-+|..|++.|.+|+++++++.+.
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~ 181 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR 181 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccc
Confidence 479999999999999999999999999999998764
No 278
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=94.41 E-value=0.029 Score=52.19 Aligned_cols=48 Identities=21% Similarity=0.115 Sum_probs=30.6
Q ss_pred CCCCCCCC-CCCCC-CCcccEEEECCChhHHHHHHHHhhCCC-eEEEEccC
Q 015413 7 ESELPVPP-YPPIE-PTAFDLIVIGTGLPESVISAAASASGK-SVLHLDPN 54 (407)
Q Consensus 7 ~~~~~~~~-~~~~~-~~~~DVvVIGaGl~GL~aA~~La~~G~-~VlvlE~~ 54 (407)
|+-|+-+. +|.++ +....|.|||+|.-|...|..|+++|+ +|++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 7 HSSGVDLGTENLYFQSNAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp ------------------CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred cccccccCcccccccCCCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 45555444 45432 234679999999999999999999999 99999996
No 279
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=94.39 E-value=0.036 Score=51.72 Aligned_cols=36 Identities=19% Similarity=0.159 Sum_probs=33.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~G 58 (407)
-.|+|||+|..|+-.|..|++.|.+|+++++++++.
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~ 191 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFR 191 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCS
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCC
Confidence 479999999999999999999999999999998763
No 280
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=94.38 E-value=0.037 Score=51.30 Aligned_cols=36 Identities=14% Similarity=0.065 Sum_probs=33.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~G 58 (407)
-.|+|||+|..|+-+|..|++.|.+|+++++++++.
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~ 188 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLR 188 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCC
Confidence 369999999999999999999999999999998764
No 281
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=94.37 E-value=0.035 Score=51.81 Aligned_cols=34 Identities=24% Similarity=0.323 Sum_probs=31.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (407)
..|.|||+|.-|...|..|+++|++|+++|++..
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~ 40 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4699999999999999999999999999998753
No 282
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=94.33 E-value=0.039 Score=52.37 Aligned_cols=36 Identities=14% Similarity=0.254 Sum_probs=32.2
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
+....|.|||+|.-|.+.|..|+++|++|.+++++.
T Consensus 27 ~~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 27 PFKHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred ccCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 334689999999999999999999999999999863
No 283
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=94.33 E-value=0.036 Score=54.83 Aligned_cols=34 Identities=29% Similarity=0.471 Sum_probs=31.3
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
...|.|||+|..|+..|..|+++|++|+++|++.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4679999999999999999999999999999863
No 284
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=94.32 E-value=0.035 Score=51.63 Aligned_cols=37 Identities=8% Similarity=0.211 Sum_probs=34.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (407)
-.|+|||+|..|+-+|..|++.|.+|+++++++++..
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~ 189 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA 189 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc
Confidence 4799999999999999999999999999999988754
No 285
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=94.25 E-value=0.11 Score=49.69 Aligned_cols=38 Identities=24% Similarity=0.502 Sum_probs=35.4
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCC
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~G 58 (407)
.++||||||||++||++|+.|+++|++|+||||++..+
T Consensus 3 ~~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~~~ 40 (397)
T 2oln_A 3 ESYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFFN 40 (397)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCC
Confidence 35899999999999999999999999999999998765
No 286
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=94.24 E-value=0.039 Score=51.82 Aligned_cols=33 Identities=15% Similarity=0.289 Sum_probs=30.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccC
Q 015413 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~ 54 (407)
...|.|||+|.-|...|..|+++|++|++++++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 347999999999999999999999999999975
No 287
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=94.21 E-value=0.04 Score=55.51 Aligned_cols=36 Identities=14% Similarity=0.084 Sum_probs=34.0
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 015413 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (407)
Q Consensus 24 DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (407)
.|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 153 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 188 (565)
T 3ntd_A 153 HATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMT 188 (565)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCT
T ss_pred EEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccch
Confidence 799999999999999999999999999999988755
No 288
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=94.18 E-value=0.038 Score=53.97 Aligned_cols=35 Identities=9% Similarity=0.004 Sum_probs=32.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCe-EEEEccCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKS-VLHLDPNPFY 57 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~-VlvlE~~~~~ 57 (407)
-+|+|||+|.+|+-.|..|++.|.+ |+++++++.+
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~ 248 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD 248 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS
T ss_pred CEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc
Confidence 4699999999999999999999999 9999998765
No 289
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=94.18 E-value=0.041 Score=54.49 Aligned_cols=38 Identities=16% Similarity=0.110 Sum_probs=34.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCc
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~ 60 (407)
-.|+|||+|..|+-.|..|++.|.+|+++|+.+++...
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~ 236 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGG 236 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccccc
Confidence 46999999999999999999999999999999988653
No 290
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=94.16 E-value=0.046 Score=48.20 Aligned_cols=37 Identities=14% Similarity=0.222 Sum_probs=31.0
Q ss_pred CCCcccEEEECC-ChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 19 EPTAFDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 19 ~~~~~DVvVIGa-Gl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
.+....|+|.|| |.-|...|..|.++|++|.++.++.
T Consensus 18 ~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 18 YFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 344567999998 9999999999999999999998864
No 291
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=94.08 E-value=0.045 Score=50.50 Aligned_cols=33 Identities=21% Similarity=0.364 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
..|.|||+|..|...|..|+++|++|++++++.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 369999999999999999999999999998864
No 292
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=94.04 E-value=0.062 Score=54.26 Aligned_cols=44 Identities=27% Similarity=0.357 Sum_probs=39.5
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCccc
Q 015413 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (407)
Q Consensus 19 ~~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (407)
.+.+|||||||||++||++|+.|+++|++|+|||+++..||...
T Consensus 15 ~~~~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~d~~~GtS~ 58 (561)
T 3da1_A 15 SEKQLDLLVIGGGITGAGIALDAQVRGIQTGLVEMNDFASGTSS 58 (561)
T ss_dssp TTSCEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSSTTCSGGG
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCcEEEEECCCCCCCccc
Confidence 34579999999999999999999999999999999988777553
No 293
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=94.03 E-value=0.045 Score=50.60 Aligned_cols=36 Identities=22% Similarity=0.260 Sum_probs=33.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~G 58 (407)
-.|+|||+|..|+-.|..|++.|.+|+++++++++.
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~ 191 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYM 191 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccC
Confidence 369999999999999999999999999999988764
No 294
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=94.03 E-value=0.057 Score=46.99 Aligned_cols=34 Identities=15% Similarity=0.245 Sum_probs=31.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (407)
..|.|||+|..|...|..|+++|++|.+++++..
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 4699999999999999999999999999998765
No 295
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=94.01 E-value=0.034 Score=54.46 Aligned_cols=36 Identities=11% Similarity=0.075 Sum_probs=32.8
Q ss_pred cccEEEECCChhHHHHHHHHhhC--CCeEEEEccCCCC
Q 015413 22 AFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFY 57 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~--G~~VlvlE~~~~~ 57 (407)
...|+|||+|.+|+-+|..|++. |.+|+++++++.+
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~ 264 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASAL 264 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSC
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCC
Confidence 35799999999999999999999 9999999998764
No 296
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=94.01 E-value=0.054 Score=53.01 Aligned_cols=38 Identities=16% Similarity=-0.001 Sum_probs=34.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCc
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~ 60 (407)
-.++|||+|..|+-+|..|++.|.+|+++|+.+++..+
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~ 185 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPK 185 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccc
Confidence 46999999999999999999999999999999987654
No 297
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=93.99 E-value=0.05 Score=53.68 Aligned_cols=37 Identities=14% Similarity=0.065 Sum_probs=34.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (407)
-.++|||+|..|+-+|..|++.|.+|+++++.+++..
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 224 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLR 224 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCcccc
Confidence 4799999999999999999999999999999988653
No 298
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=93.96 E-value=0.051 Score=50.64 Aligned_cols=33 Identities=27% Similarity=0.412 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
..|.|||+|.-|.+.|..|+++|++|+++.+++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 369999999999999999999999999999875
No 299
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=93.96 E-value=0.08 Score=52.01 Aligned_cols=39 Identities=15% Similarity=0.107 Sum_probs=35.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcc
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~ 61 (407)
-.++|||+|..|+-+|..|++.|.+|+++|+.+++....
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~ 211 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITL 211 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCC
Confidence 469999999999999999999999999999999876543
No 300
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=93.96 E-value=0.055 Score=49.27 Aligned_cols=33 Identities=21% Similarity=0.225 Sum_probs=30.6
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 015413 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (407)
Q Consensus 24 DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (407)
.|.|||+|..|...|..|+++|++|++++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 589999999999999999999999999998753
No 301
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=93.94 E-value=0.053 Score=53.45 Aligned_cols=34 Identities=18% Similarity=0.106 Sum_probs=32.2
Q ss_pred ccEEEECCChhHHHHHHHHhhC-CC-eEEEEccCCC
Q 015413 23 FDLIVIGTGLPESVISAAASAS-GK-SVLHLDPNPF 56 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~-G~-~VlvlE~~~~ 56 (407)
..|.|||+|.-|+..|..|+++ |+ +|+++|.+..
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 4799999999999999999999 99 9999999876
No 302
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=93.90 E-value=0.13 Score=45.37 Aligned_cols=51 Identities=18% Similarity=0.064 Sum_probs=41.0
Q ss_pred chHHHHHHHHHHhc-CcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 015413 279 GELPQAFCRRAAVK-GCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (407)
Q Consensus 279 ~~l~~al~r~~~~~-Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (407)
..+.+.|.+.++.. |.+++ +++|++|..+ ++++++|++.+|++++||.||.
T Consensus 68 ~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~--~~~v~~v~~~~g~~i~a~~VV~ 119 (232)
T 2cul_A 68 WAFHARAKYLLEGLRPLHLF-QATATGLLLE--GNRVVGVRTWEGPPARGEKVVL 119 (232)
T ss_dssp HHHHHHHHHHHHTCTTEEEE-ECCEEEEEEE--TTEEEEEEETTSCCEECSEEEE
T ss_pred HHHHHHHHHHHHcCCCcEEE-EeEEEEEEEe--CCEEEEEEECCCCEEECCEEEE
Confidence 35667777777776 88887 6799999886 6777788888898999999994
No 303
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=93.87 E-value=0.054 Score=50.03 Aligned_cols=34 Identities=24% Similarity=0.290 Sum_probs=31.2
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
...|.|||+|.-|...|..|+++|++|++++++.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3579999999999999999999999999999864
No 304
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=93.84 E-value=0.053 Score=50.24 Aligned_cols=37 Identities=22% Similarity=0.168 Sum_probs=34.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (407)
..|+|||+|..|+-+|..|++.|.+|+++++++++-.
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~ 210 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA 210 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC
Confidence 4699999999999999999999999999999988754
No 305
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=93.79 E-value=0.085 Score=50.15 Aligned_cols=52 Identities=13% Similarity=0.311 Sum_probs=42.6
Q ss_pred chHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEe---CCCcEEEcCEEEE
Q 015413 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL---ASGQDILSHKLVL 332 (407)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~---~~G~~i~Ad~VI~ 332 (407)
..+.+.|.+.++..|++|+++++|++|..+ ++++++|++ .++++++||.||.
T Consensus 102 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~--~~~v~gv~~~~~~~~~~~~a~~vV~ 156 (397)
T 3cgv_A 102 DKFDKHLAALAAKAGADVWVKSPALGVIKE--NGKVAGAKIRHNNEIVDVRAKMVIA 156 (397)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEEE--TTEEEEEEEEETTEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEEe--CCEEEEEEEEECCeEEEEEcCEEEE
Confidence 356678888888899999999999999987 777766776 3566899999993
No 306
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=93.79 E-value=0.051 Score=50.41 Aligned_cols=33 Identities=21% Similarity=0.265 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
..|.|||+|--|.+.|..|+++|++|+++.++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 369999999999999999999999999999875
No 307
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=93.78 E-value=0.058 Score=52.74 Aligned_cols=35 Identities=29% Similarity=0.360 Sum_probs=32.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 015413 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (407)
...+.|||+|.-|+..|..|+++|++|++++++..
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46799999999999999999999999999998865
No 308
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=93.73 E-value=0.05 Score=50.75 Aligned_cols=40 Identities=15% Similarity=0.265 Sum_probs=31.5
Q ss_pred CCCCCCcccEEEECCChhHHHHHHHHhhCC----CeEEEEccCC
Q 015413 16 PPIEPTAFDLIVIGTGLPESVISAAASASG----KSVLHLDPNP 55 (407)
Q Consensus 16 ~~~~~~~~DVvVIGaGl~GL~aA~~La~~G----~~VlvlE~~~ 55 (407)
++++|....|.|||+|.-|...|..|+++| ++|++++++.
T Consensus 16 ~~~~~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 16 ENLYFQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp ------CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred chhccCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 445566668999999999999999999999 8999999875
No 309
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=93.70 E-value=0.059 Score=53.85 Aligned_cols=38 Identities=13% Similarity=0.095 Sum_probs=35.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCc
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~ 60 (407)
-.++|||+|..|+-+|..|++.|.+|+++|+.+++...
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~ 252 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI 252 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccccc
Confidence 57999999999999999999999999999999987653
No 310
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=93.67 E-value=0.056 Score=52.96 Aligned_cols=33 Identities=24% Similarity=0.400 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
..|.|||+|..|+..|..|+++|++|+++|++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 369999999999999999999999999999874
No 311
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=93.66 E-value=0.039 Score=53.94 Aligned_cols=36 Identities=19% Similarity=0.142 Sum_probs=32.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~G 58 (407)
..|.|||.|.+|+++|..|++.|++|++.|.+...=
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~ 41 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPP 41 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCT
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcc
Confidence 359999999999999999999999999999987653
No 312
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=93.65 E-value=0.059 Score=50.72 Aligned_cols=37 Identities=11% Similarity=0.115 Sum_probs=33.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (407)
-.|+|||+|..|+-+|..|++.|.+|+++++++++.+
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~ 200 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQG 200 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSS
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCC
Confidence 3699999999999999999999999999999987654
No 313
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=93.55 E-value=0.066 Score=52.73 Aligned_cols=37 Identities=22% Similarity=0.164 Sum_probs=34.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (407)
-.|+|||+|..|+-.|..|++.|.+|+++|+.+++..
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 217 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLP 217 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCc
Confidence 4699999999999999999999999999999998765
No 314
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=93.50 E-value=0.17 Score=50.16 Aligned_cols=34 Identities=12% Similarity=0.201 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhh---CCCeEEEEccCCC
Q 015413 23 FDLIVIGTGLPESVISAAASA---SGKSVLHLDPNPF 56 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~---~G~~VlvlE~~~~ 56 (407)
+||||||||++|+++|+.|++ +|.+|+|+|+++.
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~ 39 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNV 39 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC---
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCC
Confidence 799999999999999999999 9999999999864
No 315
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=93.49 E-value=0.071 Score=52.43 Aligned_cols=34 Identities=24% Similarity=0.331 Sum_probs=31.2
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
...|.|||+|.-|...|..|+++|++|+++|++.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3469999999999999999999999999999875
No 316
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=93.47 E-value=0.15 Score=48.07 Aligned_cols=41 Identities=32% Similarity=0.361 Sum_probs=37.3
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCccc
Q 015413 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (407)
++||||||||++||++|+.|+++|++|+|||+++..+|...
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~~~~~~~ 42 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGS 42 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCSSSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCCCC
Confidence 48999999999999999999999999999999988766543
No 317
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=93.44 E-value=0.04 Score=48.33 Aligned_cols=37 Identities=16% Similarity=0.190 Sum_probs=32.1
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEE-EccCC
Q 015413 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLH-LDPNP 55 (407)
Q Consensus 19 ~~~~~DVvVIGaGl~GL~aA~~La~~G~~Vlv-lE~~~ 55 (407)
.|.+..|.|||+|.-|...|..|+++|++|++ .+++.
T Consensus 20 ~m~mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 20 FQSMTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp GGGSCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred hhcCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 34456899999999999999999999999999 77754
No 318
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=93.43 E-value=0.077 Score=53.82 Aligned_cols=38 Identities=16% Similarity=0.073 Sum_probs=35.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCc
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~ 60 (407)
-.++|||+|..|+-+|..|++.|.+|+++|+.+++...
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~ 225 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP 225 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc
Confidence 36999999999999999999999999999999987664
No 319
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=93.42 E-value=0.065 Score=49.32 Aligned_cols=35 Identities=17% Similarity=0.045 Sum_probs=32.2
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 015413 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (407)
...|.|||.|.-|...|..|+++|++|++++++..
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 35799999999999999999999999999998764
No 320
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=93.37 E-value=0.069 Score=52.98 Aligned_cols=38 Identities=21% Similarity=0.218 Sum_probs=34.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCc
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~ 60 (407)
-.++|||+|..|+-.|..|++.|.+|+++|+.+++...
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~ 220 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPY 220 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc
Confidence 46999999999999999999999999999999987653
No 321
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=93.37 E-value=0.1 Score=48.00 Aligned_cols=34 Identities=21% Similarity=0.380 Sum_probs=31.0
Q ss_pred ccEEEEC-CChhHHHHHHHHhhCCCeEEEEccCCC
Q 015413 23 FDLIVIG-TGLPESVISAAASASGKSVLHLDPNPF 56 (407)
Q Consensus 23 ~DVvVIG-aGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (407)
..|.||| +|.-|.+.|..|+++|++|.+++++..
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~ 56 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDW 56 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence 3699999 999999999999999999999998753
No 322
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=93.37 E-value=0.15 Score=48.39 Aligned_cols=37 Identities=24% Similarity=0.264 Sum_probs=35.0
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCC
Q 015413 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~G 58 (407)
++||||||||++||++|+.|+++|++|+|||+++..+
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~~ 39 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPH 39 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCC
Confidence 5899999999999999999999999999999988766
No 323
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=93.34 E-value=0.07 Score=52.76 Aligned_cols=34 Identities=29% Similarity=0.390 Sum_probs=31.2
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
...|.|||+|.-|...|..|+++|++|+++|++.
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3469999999999999999999999999999875
No 324
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=93.32 E-value=0.057 Score=54.01 Aligned_cols=36 Identities=19% Similarity=0.107 Sum_probs=33.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~G 58 (407)
-.|+|||+|.+|+-+|..|++.|.+|+++++.+++.
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~ 391 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK 391 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccC
Confidence 479999999999999999999999999999998875
No 325
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=93.32 E-value=0.066 Score=52.24 Aligned_cols=32 Identities=25% Similarity=0.428 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 24 DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
.|.|||+|..|+..|..|+++|++|++++++.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 58999999999999999999999999999863
No 326
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=93.29 E-value=0.063 Score=54.59 Aligned_cols=31 Identities=16% Similarity=0.156 Sum_probs=30.0
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEEccC
Q 015413 24 DLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (407)
Q Consensus 24 DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~ 54 (407)
.|+|||+|..|+-+|..|++.|.+|++++++
T Consensus 288 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 288 KTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 6999999999999999999999999999987
No 327
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=93.29 E-value=0.081 Score=46.51 Aligned_cols=34 Identities=15% Similarity=0.246 Sum_probs=31.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccC
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~ 54 (407)
+...|+|||+|-.|...|..|.++|.+|+|++.+
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 4567999999999999999999999999999874
No 328
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=93.26 E-value=0.17 Score=50.76 Aligned_cols=44 Identities=9% Similarity=0.159 Sum_probs=34.8
Q ss_pred CCCCCCCCCcccEEEECCChhHHHHHHHHhh---CCCeEEEEccCCC
Q 015413 13 PPYPPIEPTAFDLIVIGTGLPESVISAAASA---SGKSVLHLDPNPF 56 (407)
Q Consensus 13 ~~~~~~~~~~~DVvVIGaGl~GL~aA~~La~---~G~~VlvlE~~~~ 56 (407)
|+...+.+..+||||||||++|+++|+.|++ .|.+|+|+|+.+.
T Consensus 16 ~~~~~M~~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~ 62 (550)
T 2e4g_A 16 PRGSHMSGKIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDI 62 (550)
T ss_dssp -----CCSCCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCC
T ss_pred cCCcccCCCCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCC
Confidence 3333333457899999999999999999999 9999999999753
No 329
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=93.19 E-value=0.084 Score=46.10 Aligned_cols=34 Identities=24% Similarity=0.253 Sum_probs=30.3
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
...+.|||+|..|...|..|+++|++|.+++++.
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999998763
No 330
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=93.19 E-value=0.17 Score=49.45 Aligned_cols=52 Identities=17% Similarity=0.142 Sum_probs=42.4
Q ss_pred chHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeC---CCc--EEEcCEEEE
Q 015413 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLA---SGQ--DILSHKLVL 332 (407)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~---~G~--~i~Ad~VI~ 332 (407)
..+.+.|.+.+...|++|++++.|++|..+ ++++++|++. +|+ +++||.||.
T Consensus 100 ~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~--~~~v~gv~~~~~~~G~~~~~~ad~VV~ 156 (453)
T 3atr_A 100 PLYNQRVLKEAQDRGVEIWDLTTAMKPIFE--DGYVKGAVLFNRRTNEELTVYSKVVVE 156 (453)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEE--TTEEEEEEEEETTTTEEEEEECSEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEeCcEEEEEEEE--CCEEEEEEEEEcCCCceEEEEcCEEEE
Confidence 357788888888899999999999999986 6777667654 676 799999993
No 331
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=93.14 E-value=0.097 Score=48.67 Aligned_cols=37 Identities=16% Similarity=0.189 Sum_probs=33.0
Q ss_pred CCCCcccEEEECCChhHHHHHHHHhhCCC-eEEEEccC
Q 015413 18 IEPTAFDLIVIGTGLPESVISAAASASGK-SVLHLDPN 54 (407)
Q Consensus 18 ~~~~~~DVvVIGaGl~GL~aA~~La~~G~-~VlvlE~~ 54 (407)
++|....|.|||+|..|...|..|+++|+ .|.++|.+
T Consensus 4 m~~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 4 MTIKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 34555689999999999999999999999 99999997
No 332
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=93.13 E-value=0.084 Score=50.67 Aligned_cols=34 Identities=26% Similarity=0.317 Sum_probs=31.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (407)
-.|+|||+|..|+.+|..|...|.+|+++|.+..
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 4799999999999999999999999999998863
No 333
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=93.03 E-value=0.082 Score=51.33 Aligned_cols=33 Identities=18% Similarity=0.196 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (407)
..|.|||+|.-|+..|..|++ |++|+++|.+..
T Consensus 37 mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~ 69 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQA 69 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHH
Confidence 579999999999999999998 999999998743
No 334
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=93.03 E-value=0.086 Score=48.39 Aligned_cols=37 Identities=16% Similarity=0.090 Sum_probs=34.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (407)
..|+|||+|..|+-+|..|++.|.+|+++++++++..
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~ 191 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA 191 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc
Confidence 4699999999999999999999999999999988765
No 335
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.01 E-value=0.054 Score=49.24 Aligned_cols=35 Identities=14% Similarity=0.160 Sum_probs=31.8
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
+...|+|||+|-.|+..|..|.+.|.+|+|++.+.
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 34579999999999999999999999999999864
No 336
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=92.96 E-value=0.091 Score=48.30 Aligned_cols=33 Identities=30% Similarity=0.370 Sum_probs=30.2
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
+..|.|||+|+.|...|..|+ +|++|+++|++.
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 457999999999999999999 999999999865
No 337
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=92.95 E-value=0.089 Score=51.65 Aligned_cols=35 Identities=23% Similarity=0.128 Sum_probs=32.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC-eEEEEccCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGK-SVLHLDPNPFY 57 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~-~VlvlE~~~~~ 57 (407)
-+|+|||+|..|+-+|..|.+.|. +|++++++++.
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~ 300 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRK 300 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCST
T ss_pred CEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCcc
Confidence 479999999999999999999997 59999998875
No 338
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=92.91 E-value=0.21 Score=50.60 Aligned_cols=53 Identities=19% Similarity=0.274 Sum_probs=43.6
Q ss_pred chHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCC------C---------cEEEcCEEEE
Q 015413 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLAS------G---------QDILSHKLVL 332 (407)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~------G---------~~i~Ad~VI~ 332 (407)
..+.+.|.+.+++.|++|+++++|++|..+ +++++++|++.+ | .+++||.||.
T Consensus 144 ~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~-~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~ 211 (584)
T 2gmh_A 144 GHLVSWMGEQAEALGVEVYPGYAAAEILFH-EDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIF 211 (584)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEEC-TTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEc-CCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEE
Confidence 477788888888899999999999999986 356777887753 3 6899999994
No 339
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=92.89 E-value=0.069 Score=50.67 Aligned_cols=32 Identities=19% Similarity=0.238 Sum_probs=30.1
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 24 DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
.|.|||+|.-|...|..|+++|++|++++++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 79999999999999999999999999998763
No 340
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=92.87 E-value=0.11 Score=48.46 Aligned_cols=33 Identities=15% Similarity=0.319 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC-eEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~-~VlvlE~~~ 55 (407)
..|.|||+|..|...|..|+..|+ +|.++|.+.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 479999999999999999999998 999999874
No 341
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=92.85 E-value=0.11 Score=48.06 Aligned_cols=35 Identities=20% Similarity=0.142 Sum_probs=31.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 015413 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (407)
...|.|||+|.-|...|..|+++|++|++++++..
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 64 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAE 64 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 35799999999999999999999999999998643
No 342
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=92.85 E-value=0.16 Score=48.84 Aligned_cols=53 Identities=15% Similarity=0.180 Sum_probs=42.4
Q ss_pred chHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCc--EEEcCEEEE
Q 015413 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ--DILSHKLVL 332 (407)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~--~i~Ad~VI~ 332 (407)
..+.+.|.+.+++.|++|+.+++|++|..+ +++..+.|++.+|+ +++||.||.
T Consensus 106 ~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~-~~~~~v~v~~~~g~~~~~~a~~vV~ 160 (421)
T 3nix_A 106 GNFDKTLADEAARQGVDVEYEVGVTDIKFF-GTDSVTTIEDINGNKREIEARFIID 160 (421)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEE-TTEEEEEEEETTSCEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEe-CCEEEEEEEcCCCCEEEEEcCEEEE
Confidence 466778888888889999999999999986 24434566667888 699999993
No 343
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=92.83 E-value=0.15 Score=48.75 Aligned_cols=52 Identities=13% Similarity=0.118 Sum_probs=42.4
Q ss_pred chHHHHHHHHHHhc-CcEEEeCCceeEEEEecCCCcEE-EEEeCCCcEEEcCEEEE
Q 015413 279 GELPQAFCRRAAVK-GCLYVLRMPVISLLTDQNSGSYK-GVRLASGQDILSHKLVL 332 (407)
Q Consensus 279 ~~l~~al~r~~~~~-Gg~i~l~~~V~~I~~~~~~g~~~-gV~~~~G~~i~Ad~VI~ 332 (407)
..+.+.|.+.+.+. |++|+++++|++|..+ ++.++ .|++.+|++++||.||.
T Consensus 107 ~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~--~~~v~g~v~~~~g~~~~ad~vV~ 160 (399)
T 2x3n_A 107 ESLRRLVLEKIDGEATVEMLFETRIEAVQRD--ERHAIDQVRLNDGRVLRPRVVVG 160 (399)
T ss_dssp HHHHHHHHHHHTTCTTEEEECSCCEEEEEEC--TTSCEEEEEETTSCEEEEEEEEE
T ss_pred HHHHHHHHHHhhhcCCcEEEcCCEEEEEEEc--CCceEEEEEECCCCEEECCEEEE
Confidence 46777888887777 8999999999999886 44443 67788898999999993
No 344
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=92.81 E-value=0.099 Score=48.95 Aligned_cols=32 Identities=19% Similarity=0.342 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~ 54 (407)
..+.|||+|--|...|..|+++|++|++++++
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 57999999999999999999999999999885
No 345
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=92.77 E-value=0.096 Score=48.71 Aligned_cols=33 Identities=15% Similarity=0.413 Sum_probs=29.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
...|.|||+|--|...|..|+++|++|+++ ++.
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 356999999999999999999999999999 654
No 346
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=92.76 E-value=0.05 Score=48.12 Aligned_cols=32 Identities=13% Similarity=0.175 Sum_probs=30.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~ 54 (407)
..|.|||+|+-|.+.|..|+++|++|+.++++
T Consensus 7 mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 7 LRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred cEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 47999999999999999999999999999885
No 347
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=92.76 E-value=0.19 Score=50.76 Aligned_cols=40 Identities=25% Similarity=0.419 Sum_probs=36.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCc
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~ 60 (407)
.++||||||||++|+++|+.|+++|++|+|||+++..+|.
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~~~~Gt 70 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQDFAEGT 70 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCSG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCc
Confidence 4699999999999999999999999999999999866663
No 348
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=92.76 E-value=0.1 Score=48.57 Aligned_cols=33 Identities=21% Similarity=0.231 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC-eEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~-~VlvlE~~~ 55 (407)
..|.|||+|..|...|..|+++|+ +|.++|.+.
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 479999999999999999999998 999999875
No 349
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=92.74 E-value=0.1 Score=47.77 Aligned_cols=35 Identities=9% Similarity=0.060 Sum_probs=33.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~ 57 (407)
-.|+|||+|..|+-+|..|++.|.+|+++++++++
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~ 182 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANICSKIYLIHRRDEF 182 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCC
Confidence 46999999999999999999999999999999887
No 350
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=92.73 E-value=0.067 Score=52.57 Aligned_cols=33 Identities=12% Similarity=0.352 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
..|||+|+|-.|...|..|++.|++|+|+|++.
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 469999999999999999999999999999874
No 351
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=92.73 E-value=0.25 Score=48.52 Aligned_cols=38 Identities=13% Similarity=0.060 Sum_probs=31.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhC--CCeEEEEccCCCCC
Q 015413 21 TAFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYG 58 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~--G~~VlvlE~~~~~G 58 (407)
.+.||||||||++||+||..|++. |++|+|+|+++.+|
T Consensus 2 ~~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~ 41 (472)
T 3iwa_A 2 SLKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRIS 41 (472)
T ss_dssp --CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC----
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccc
Confidence 357999999999999999999999 99999999999976
No 352
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=92.69 E-value=0.11 Score=48.30 Aligned_cols=33 Identities=30% Similarity=0.348 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC--eEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~--~VlvlE~~~ 55 (407)
..|+|||+|..|...|..|+++|+ +|+++|++.
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 469999999999999999999999 999999874
No 353
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=92.67 E-value=0.11 Score=48.34 Aligned_cols=33 Identities=15% Similarity=0.242 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
..|.|||+|..|...|..|+++|++|++++++.
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 479999999999999999999999999999874
No 354
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=92.66 E-value=0.13 Score=47.70 Aligned_cols=33 Identities=21% Similarity=0.439 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC--eEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~--~VlvlE~~~ 55 (407)
..|.|||+|.-|...|..|+++|+ +|.+++++.
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 579999999999999999999999 999999875
No 355
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=92.64 E-value=0.11 Score=47.88 Aligned_cols=37 Identities=11% Similarity=0.090 Sum_probs=34.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (407)
-.|+|||+|..|+-+|..|++.|.+|+++++++++.+
T Consensus 155 ~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~ 191 (332)
T 3lzw_A 155 RRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA 191 (332)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSS
T ss_pred CEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCc
Confidence 4699999999999999999999999999999988743
No 356
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=92.61 E-value=0.26 Score=48.71 Aligned_cols=43 Identities=28% Similarity=0.333 Sum_probs=38.6
Q ss_pred CcccEEEECCChhHHHHHHHHhh-CCCeEEEEc--------cCCCCCCcccc
Q 015413 21 TAFDLIVIGTGLPESVISAAASA-SGKSVLHLD--------PNPFYGSHFSS 63 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~-~G~~VlvlE--------~~~~~GG~~~t 63 (407)
.+|||||||||.+|++||..|++ .|++|+|+| +++.+||.+..
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~ 53 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVN 53 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHH
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccC
Confidence 46999999999999999999999 999999999 47789997643
No 357
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=92.61 E-value=0.071 Score=48.99 Aligned_cols=33 Identities=15% Similarity=0.210 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
..|.|||+|--|.+.|..|+++|++|++++++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 369999999999999999999999999999873
No 358
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=92.59 E-value=0.12 Score=46.94 Aligned_cols=34 Identities=18% Similarity=0.220 Sum_probs=31.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (407)
..|+|.|||.-|...+..|.++|++|.++.++..
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 4699999999999999999999999999988754
No 359
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=92.54 E-value=0.11 Score=47.44 Aligned_cols=33 Identities=24% Similarity=0.288 Sum_probs=30.7
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 015413 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (407)
Q Consensus 24 DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (407)
.|.|||+|.-|...|..|+++|++|++++++..
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred EEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 589999999999999999999999999998754
No 360
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=92.53 E-value=0.28 Score=48.52 Aligned_cols=43 Identities=33% Similarity=0.364 Sum_probs=38.8
Q ss_pred CcccEEEECCChhHHHHHHHHhh-CCCeEEEEc--------cCCCCCCcccc
Q 015413 21 TAFDLIVIGTGLPESVISAAASA-SGKSVLHLD--------PNPFYGSHFSS 63 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~-~G~~VlvlE--------~~~~~GG~~~t 63 (407)
.+|||||||||.+|++||..|++ .|++|+|+| +++.+||.+..
T Consensus 6 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~ 57 (495)
T 2wpf_A 6 KAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVN 57 (495)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHH
T ss_pred cccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeec
Confidence 46999999999999999999999 999999999 47789997643
No 361
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=92.45 E-value=0.12 Score=50.94 Aligned_cols=34 Identities=9% Similarity=-0.023 Sum_probs=31.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (407)
-.++|||+|..|+-.|..|++.|.+|+++++...
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 219 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTGIGLDTTVMMRSIP 219 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEcCcc
Confidence 3699999999999999999999999999998653
No 362
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=92.43 E-value=0.088 Score=50.09 Aligned_cols=33 Identities=24% Similarity=0.317 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
-.|+|||+|..|+.+|..|...|.+|+++|++.
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999874
No 363
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=92.35 E-value=0.11 Score=51.27 Aligned_cols=36 Identities=11% Similarity=0.158 Sum_probs=31.4
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEEccC
Q 015413 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (407)
Q Consensus 19 ~~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~ 54 (407)
.|++.+|.|||+|.-|...|..|+++|++|.+++++
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~ 47 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRS 47 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred ccCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 356678999999999999999999999999999886
No 364
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=92.35 E-value=0.29 Score=48.20 Aligned_cols=42 Identities=31% Similarity=0.296 Sum_probs=38.5
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~t 63 (407)
.+|||||||||.+||+||..|++.|++|+|+|+ +.+||.+..
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~ 66 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCVI 66 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCceec
Confidence 369999999999999999999999999999999 789997653
No 365
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=92.34 E-value=0.13 Score=51.31 Aligned_cols=31 Identities=13% Similarity=0.132 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEEccC
Q 015413 24 DLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (407)
Q Consensus 24 DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~ 54 (407)
.++|||+|..|+-.|..|++.|.+|++++++
T Consensus 212 ~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 212 KTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred eEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 5999999999999999999999999999985
No 366
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=92.31 E-value=0.12 Score=51.20 Aligned_cols=32 Identities=19% Similarity=0.234 Sum_probs=29.7
Q ss_pred ccEEEECCChhHHHHHHHHhhC--CCeEEEEccC
Q 015413 23 FDLIVIGTGLPESVISAAASAS--GKSVLHLDPN 54 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~--G~~VlvlE~~ 54 (407)
..|.|||+|..|+..|..|+++ |++|+++|++
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~ 43 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMN 43 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 4799999999999999999999 7999999975
No 367
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=92.23 E-value=0.11 Score=51.22 Aligned_cols=33 Identities=18% Similarity=0.169 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHhhC--CCeEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASAS--GKSVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~--G~~VlvlE~~~ 55 (407)
..|.|||+|..|+..|..|+++ |++|++++++.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 4799999999999999999999 89999999863
No 368
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=92.23 E-value=0.36 Score=47.68 Aligned_cols=39 Identities=23% Similarity=0.394 Sum_probs=35.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhC--CCeEEEEccCCCCC
Q 015413 20 PTAFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYG 58 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~--G~~VlvlE~~~~~G 58 (407)
+..+||||||||++|++||..|+++ |.+|+|+|++++++
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~ 49 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELP 49 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCC
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCC
Confidence 4579999999999999999999887 89999999998775
No 369
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=92.22 E-value=0.13 Score=47.36 Aligned_cols=33 Identities=15% Similarity=0.126 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
..|.|||+|..|...|..|+++|++|++++++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 469999999999999999999999999998864
No 370
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=92.22 E-value=0.095 Score=47.87 Aligned_cols=33 Identities=21% Similarity=0.265 Sum_probs=30.7
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 015413 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (407)
Q Consensus 24 DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (407)
.|.|||+|.-|...|..|+++|++|++++++..
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 589999999999999999999999999998754
No 371
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=92.22 E-value=0.15 Score=47.14 Aligned_cols=33 Identities=30% Similarity=0.505 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
..|.|||.|.-|...|..|+++|++|++++++.
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999998875
No 372
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=92.18 E-value=0.074 Score=43.08 Aligned_cols=33 Identities=21% Similarity=0.204 Sum_probs=29.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
..|+|||+|..|...|..|++.|.+|++++++.
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 469999999999999999999999999998763
No 373
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=92.16 E-value=0.12 Score=50.22 Aligned_cols=34 Identities=29% Similarity=0.264 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (407)
-..-|||.|.-|+..|..|+++|++|+++|.+..
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~ 45 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQ 45 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 3578999999999999999999999999998754
No 374
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=92.08 E-value=0.15 Score=47.62 Aligned_cols=33 Identities=21% Similarity=0.199 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC-eEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~-~VlvlE~~~ 55 (407)
..|.|||||..|...|..|+++|+ +|.++|.+.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 479999999999999999999999 999999875
No 375
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=92.07 E-value=0.14 Score=44.16 Aligned_cols=32 Identities=13% Similarity=0.184 Sum_probs=29.4
Q ss_pred cEEEEC-CChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 24 DLIVIG-TGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 24 DVvVIG-aGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
.|.||| +|..|...|..|+++|++|.+++++.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 489999 99999999999999999999998763
No 376
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=92.05 E-value=0.12 Score=50.63 Aligned_cols=35 Identities=11% Similarity=0.035 Sum_probs=31.3
Q ss_pred ccEEEECCChhHHHHHHHHh--------------------hCCC-eEEEEccCCCC
Q 015413 23 FDLIVIGTGLPESVISAAAS--------------------ASGK-SVLHLDPNPFY 57 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La--------------------~~G~-~VlvlE~~~~~ 57 (407)
-.|+|||+|..|+-+|..|+ +.|. +|+|+++++.+
T Consensus 146 ~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~ 201 (460)
T 1cjc_A 146 DTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPL 201 (460)
T ss_dssp SEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGG
T ss_pred CEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChH
Confidence 47999999999999999999 6787 79999998765
No 377
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=92.00 E-value=0.16 Score=47.42 Aligned_cols=34 Identities=24% Similarity=0.237 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHH-HHHHHhhCCCeEEEEccCCC
Q 015413 23 FDLIVIGTGLPESV-ISAAASASGKSVLHLDPNPF 56 (407)
Q Consensus 23 ~DVvVIGaGl~GL~-aA~~La~~G~~VlvlE~~~~ 56 (407)
..|.|||.|-+|++ +|..|.+.|++|.+.|+++.
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 36899999999996 78889999999999999865
No 378
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=92.00 E-value=0.12 Score=49.78 Aligned_cols=31 Identities=23% Similarity=0.264 Sum_probs=28.9
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 24 DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
.|.|||+|..|+..|..|++ |++|++++++.
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 58999999999999999999 99999999864
No 379
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=91.97 E-value=0.15 Score=50.33 Aligned_cols=35 Identities=14% Similarity=0.170 Sum_probs=32.1
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
.+.+|.|||.|.-|...|..|+++|++|++++++.
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34579999999999999999999999999999875
No 380
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=91.96 E-value=0.15 Score=47.16 Aligned_cols=32 Identities=25% Similarity=0.359 Sum_probs=30.0
Q ss_pred cEEEECCChhHHHHHHHHhhCCC--eEEEEccCC
Q 015413 24 DLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (407)
Q Consensus 24 DVvVIGaGl~GL~aA~~La~~G~--~VlvlE~~~ 55 (407)
.|.|||+|..|...|..|+.+|+ +|.++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 58999999999999999999999 999999874
No 381
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=91.96 E-value=0.11 Score=48.37 Aligned_cols=30 Identities=20% Similarity=0.265 Sum_probs=28.7
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEEcc
Q 015413 24 DLIVIGTGLPESVISAAASASGKSVLHLDP 53 (407)
Q Consensus 24 DVvVIGaGl~GL~aA~~La~~G~~VlvlE~ 53 (407)
.|.|||+|..|...|..|+++|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 489999999999999999999999999998
No 382
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=91.95 E-value=0.13 Score=49.62 Aligned_cols=34 Identities=24% Similarity=0.337 Sum_probs=31.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (407)
..|||||.|-.|...|..|.+.|++|+++|.+..
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 3699999999999999999999999999998753
No 383
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=91.95 E-value=0.14 Score=46.34 Aligned_cols=33 Identities=9% Similarity=-0.088 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (407)
..|+|||+|..|+-+|..|++.| +|+++++++.
T Consensus 142 ~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~ 174 (297)
T 3fbs_A 142 GKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV 174 (297)
T ss_dssp CEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC
T ss_pred CEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC
Confidence 47999999999999999999999 9999998776
No 384
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=91.93 E-value=0.19 Score=52.34 Aligned_cols=33 Identities=30% Similarity=0.287 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
..|.|||+|.-|...|..|+++|++|+++|++.
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 469999999999999999999999999999875
No 385
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=91.93 E-value=0.088 Score=49.60 Aligned_cols=35 Identities=14% Similarity=0.080 Sum_probs=32.1
Q ss_pred cccEEEECCChhHHHHHHHHhhCC-------CeEEEEccCCC
Q 015413 22 AFDLIVIGTGLPESVISAAASASG-------KSVLHLDPNPF 56 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G-------~~VlvlE~~~~ 56 (407)
...|.|||+|.-|...|..|+++| ++|.+++++..
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 357999999999999999999999 99999998765
No 386
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=91.81 E-value=0.41 Score=39.86 Aligned_cols=50 Identities=20% Similarity=0.074 Sum_probs=40.4
Q ss_pred chHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 015413 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (407)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~ 333 (407)
.++.+.+.+.++..|.+++++ +|++|..+ ++. +.|++.+| +++||.||..
T Consensus 56 ~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~--~~~-~~v~~~~g-~i~ad~vI~A 105 (180)
T 2ywl_A 56 EELLRRLEAHARRYGAEVRPG-VVKGVRDM--GGV-FEVETEEG-VEKAERLLLC 105 (180)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CCCEEEEC--SSS-EEEECSSC-EEEEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEeC-EEEEEEEc--CCE-EEEEECCC-EEEECEEEEC
Confidence 467777888888899999999 99999875 343 57777777 8999999953
No 387
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=91.80 E-value=0.22 Score=50.47 Aligned_cols=52 Identities=13% Similarity=0.104 Sum_probs=42.7
Q ss_pred chHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeC-CC--cEEEcCEEEE
Q 015413 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLA-SG--QDILSHKLVL 332 (407)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~-~G--~~i~Ad~VI~ 332 (407)
..+.+.|.+.++..|++++.+++|++|..+ ++..++|++. +| ++++||.||.
T Consensus 128 ~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~--~g~~~~V~~~~~G~~~~i~AdlVV~ 182 (591)
T 3i3l_A 128 EEFDKLLLDEARSRGITVHEETPVTDVDLS--DPDRVVLTVRRGGESVTVESDFVID 182 (591)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEECC--STTCEEEEEEETTEEEEEEESEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEc--CCCEEEEEEecCCceEEEEcCEEEE
Confidence 467788888888899999999999999875 4555788876 66 5799999993
No 388
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=91.74 E-value=0.34 Score=48.44 Aligned_cols=38 Identities=5% Similarity=0.161 Sum_probs=34.4
Q ss_pred CCcccEEEECCChhHHHHHHHHhh---CCCeEEEEccCCCC
Q 015413 20 PTAFDLIVIGTGLPESVISAAASA---SGKSVLHLDPNPFY 57 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~---~G~~VlvlE~~~~~ 57 (407)
+..+||||||||++||++|+.|++ .|.+|+|||+.+..
T Consensus 3 ~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~ 43 (538)
T 2aqj_A 3 KPIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAIP 43 (538)
T ss_dssp CBCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSSC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCCC
Confidence 346899999999999999999999 99999999997643
No 389
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=91.70 E-value=0.11 Score=47.92 Aligned_cols=31 Identities=19% Similarity=0.204 Sum_probs=29.1
Q ss_pred ccEEEECCChhHHHHHHHHhhC-----C-CeEEEEcc
Q 015413 23 FDLIVIGTGLPESVISAAASAS-----G-KSVLHLDP 53 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~-----G-~~VlvlE~ 53 (407)
..|.|||+|.-|...|..|+++ | ++|+++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 4799999999999999999999 9 99999986
No 390
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=91.68 E-value=0.32 Score=47.53 Aligned_cols=41 Identities=32% Similarity=0.339 Sum_probs=38.0
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCccc
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~~ 62 (407)
.+|||||||||.+||+||..|++.|++|+|+|+ +.+||.+.
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~ 44 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCV 44 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHH
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCccc
Confidence 369999999999999999999999999999999 78999664
No 391
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=91.65 E-value=0.34 Score=47.96 Aligned_cols=40 Identities=38% Similarity=0.464 Sum_probs=35.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (407)
|+++||||||||++|+++|+.|+++|++|+|||+++..+|
T Consensus 1 M~~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~~~~g 40 (501)
T 2qcu_A 1 METKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACA 40 (501)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCS
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhCCCCEEEEECCCCCCC
Confidence 3569999999999999999999999999999999875444
No 392
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=91.63 E-value=0.16 Score=46.91 Aligned_cols=32 Identities=16% Similarity=0.082 Sum_probs=29.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
..|.|||+|--|.+.|..|+ +|++|+++.++.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 36999999999999999999 999999999875
No 393
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=91.62 E-value=0.16 Score=46.45 Aligned_cols=33 Identities=18% Similarity=0.198 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
..|.|||+|..|...|..|+++|++|.+++++.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 479999999999999999999999999998764
No 394
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=91.61 E-value=0.19 Score=49.59 Aligned_cols=33 Identities=12% Similarity=0.024 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
-.++|||+|..|+-.|..|++.|.+|+++++..
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 220 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSI 220 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 369999999999999999999999999999854
No 395
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=91.58 E-value=0.35 Score=48.04 Aligned_cols=52 Identities=23% Similarity=0.226 Sum_probs=42.0
Q ss_pred chHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEe--CCCc--EEEcCEEEE
Q 015413 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL--ASGQ--DILSHKLVL 332 (407)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~--~~G~--~i~Ad~VI~ 332 (407)
..+.+.|.+.+++.|++|+++++|++|..+ ++++++|++ .+|+ +++||.||.
T Consensus 111 ~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~--~~~v~gv~~~~~dG~~~~i~ad~VI~ 166 (512)
T 3e1t_A 111 ARFDDMLLRNSERKGVDVRERHEVIDVLFE--GERAVGVRYRNTEGVELMAHARFIVD 166 (512)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEEE--TTEEEEEEEECSSSCEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEE--CCEEEEEEEEeCCCCEEEEEcCEEEE
Confidence 467778888888899999999999999987 677666654 4574 799999993
No 396
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=91.43 E-value=0.22 Score=46.17 Aligned_cols=48 Identities=13% Similarity=0.093 Sum_probs=33.2
Q ss_pred CCCCCCCCCCCCCCcccEEEECC-ChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 8 SELPVPPYPPIEPTAFDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 8 ~~~~~~~~~~~~~~~~DVvVIGa-Gl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
+|-+-+..++.......|+|.|| |.-|...+..|+++|++|.++.++.
T Consensus 6 ~~~~~~~~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (330)
T 2pzm_A 6 HHHHHSSGLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFA 54 (330)
T ss_dssp --------CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred cccccccCCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 33333344444444457999997 9999999999999999999998854
No 397
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=91.38 E-value=0.2 Score=46.65 Aligned_cols=36 Identities=17% Similarity=0.234 Sum_probs=32.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCC-eEEEEccCC
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~-~VlvlE~~~ 55 (407)
|+...|.|||+|..|.+.|..|+..|+ +|.++|.+.
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 445689999999999999999999999 999999875
No 398
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=91.38 E-value=0.47 Score=47.23 Aligned_cols=36 Identities=11% Similarity=0.255 Sum_probs=33.4
Q ss_pred CcccEEEECCChhHHHHHHHHhh------------CCCeEEEEccCCC
Q 015413 21 TAFDLIVIGTGLPESVISAAASA------------SGKSVLHLDPNPF 56 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~------------~G~~VlvlE~~~~ 56 (407)
..+||||||||++||++|+.|++ +|.+|+|+|+++.
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~ 53 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDV 53 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCC
Confidence 35899999999999999999999 9999999999764
No 399
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=91.38 E-value=0.19 Score=47.14 Aligned_cols=33 Identities=18% Similarity=0.254 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
..|.|||.|+-|.+.|..|+++|++|.+++++.
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 359999999999999999999999999999875
No 400
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=91.36 E-value=0.16 Score=45.58 Aligned_cols=35 Identities=14% Similarity=0.251 Sum_probs=31.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCC----CeEEEEccCCC
Q 015413 22 AFDLIVIGTGLPESVISAAASASG----KSVLHLDPNPF 56 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G----~~VlvlE~~~~ 56 (407)
...|.|||+|.-|...|..|+++| ++|.+++++..
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 347999999999999999999999 79999998765
No 401
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=91.29 E-value=0.29 Score=44.80 Aligned_cols=36 Identities=19% Similarity=0.074 Sum_probs=29.8
Q ss_pred CCcccEEEECCC---hhHHHHHHHHhhCCCeEEEEccCC
Q 015413 20 PTAFDLIVIGTG---LPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 20 ~~~~DVvVIGaG---l~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
++..-|+|.||+ --|...|..|+++|.+|+++.++.
T Consensus 28 l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~ 66 (296)
T 3k31_A 28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSE 66 (296)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred cCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCCh
Confidence 334458999985 678999999999999999998874
No 402
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=91.27 E-value=0.4 Score=48.55 Aligned_cols=41 Identities=29% Similarity=0.264 Sum_probs=37.5
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcc
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~ 61 (407)
.++||||||+|++||+||+.|+++|.+|+||||+...||..
T Consensus 6 ~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~s 46 (588)
T 2wdq_A 6 REFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHT 46 (588)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGG
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCcc
Confidence 46899999999999999999999999999999998876643
No 403
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=91.22 E-value=0.2 Score=46.38 Aligned_cols=32 Identities=19% Similarity=0.276 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHHHHhhC--CCeEEEEccCC
Q 015413 24 DLIVIGTGLPESVISAAASAS--GKSVLHLDPNP 55 (407)
Q Consensus 24 DVvVIGaGl~GL~aA~~La~~--G~~VlvlE~~~ 55 (407)
.|.|||+|..|...|..|+++ |++|.++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 589999999999999999985 79999999975
No 404
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=91.21 E-value=0.17 Score=46.98 Aligned_cols=33 Identities=15% Similarity=0.161 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCC-CeEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASG-KSVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G-~~VlvlE~~~ 55 (407)
..|.|||+|.-|...|..|+++| ++|++++++.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 46999999999999999999999 9999999985
No 405
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=91.18 E-value=0.11 Score=50.03 Aligned_cols=58 Identities=16% Similarity=0.088 Sum_probs=40.5
Q ss_pred eEeecCCc---chHHHHHHHHHHhcCcEEEeCCcee---------EEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 015413 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVI---------SLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (407)
Q Consensus 271 ~~~p~gG~---~~l~~al~r~~~~~Gg~i~l~~~V~---------~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (407)
.+.+..|. ..+.++|.+.+++.|++++++++|+ +|..+ ++++ +|++.+| +++||.||.
T Consensus 161 ~~~~~~g~v~~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~--~~~v-~v~~~~g-~i~a~~VV~ 230 (405)
T 3c4n_A 161 RVDPRALTYRPGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVT--NTHQ-IVVHETR-QIRAGVIIV 230 (405)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC----------CBCCE-EEEEEEEEE
T ss_pred EEcCCCEEEcHHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEee--CCeE-EEEECCc-EEECCEEEE
Confidence 33444442 5688999999989999999999999 88765 5554 7776555 899999994
No 406
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=91.17 E-value=0.21 Score=50.12 Aligned_cols=36 Identities=14% Similarity=0.008 Sum_probs=32.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~G 58 (407)
-.++|||+|..|+=.|..+++-|.+|+|+++...+-
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~ 259 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLR 259 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSST
T ss_pred ceEEEECCCHHHHHHHHHHHhcCCeEEEeccccccc
Confidence 469999999999999999999999999999866553
No 407
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=91.09 E-value=0.19 Score=48.37 Aligned_cols=33 Identities=30% Similarity=0.457 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
-.|+|||+|-.|+.+|..|...|.+|+++|++.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 469999999999999999999999999999874
No 408
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=91.04 E-value=0.21 Score=49.24 Aligned_cols=35 Identities=11% Similarity=0.157 Sum_probs=31.7
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccC
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~ 54 (407)
|+..+|.|||+|.-|...|..|+++|++|.+++++
T Consensus 3 m~~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~ 37 (474)
T 2iz1_A 3 MAQANFGVVGMAVMGKNLALNVESRGYTVAIYNRT 37 (474)
T ss_dssp CTTBSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCCCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCC
Confidence 33468999999999999999999999999999886
No 409
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=90.90 E-value=0.18 Score=48.46 Aligned_cols=30 Identities=27% Similarity=0.319 Sum_probs=27.9
Q ss_pred ccEEEECCChhHHHHHHHHhh-CCCeEEEEc
Q 015413 23 FDLIVIGTGLPESVISAAASA-SGKSVLHLD 52 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~-~G~~VlvlE 52 (407)
..|.|||+|.-|...|..|++ +|++|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 369999999999999999998 599999998
No 410
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=90.90 E-value=0.28 Score=44.42 Aligned_cols=32 Identities=13% Similarity=0.149 Sum_probs=29.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~ 54 (407)
..|+|+|+|-.|..+|..|++.|.+|+++.++
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 46999999999999999999999999999876
No 411
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=90.89 E-value=0.21 Score=47.55 Aligned_cols=36 Identities=22% Similarity=0.219 Sum_probs=32.5
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCC-eEEEEccCC
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~-~VlvlE~~~ 55 (407)
..+..|||+|||-+|..+|..|...|. +|+++|++.
T Consensus 186 l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 186 LDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 345689999999999999999999998 999999984
No 412
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=90.86 E-value=0.52 Score=48.42 Aligned_cols=41 Identities=32% Similarity=0.340 Sum_probs=37.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcc
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~ 61 (407)
.++||||||+|++||+||+.|+++|.+|+||||....||.+
T Consensus 4 ~~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~~g~s 44 (660)
T 2bs2_A 4 QYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSHS 44 (660)
T ss_dssp EECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGGGSGG
T ss_pred ccccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCCCCcc
Confidence 46899999999999999999999999999999998776544
No 413
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=90.86 E-value=0.26 Score=45.90 Aligned_cols=36 Identities=14% Similarity=0.146 Sum_probs=32.2
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCC-eEEEEccCC
Q 015413 20 PTAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (407)
Q Consensus 20 ~~~~DVvVIGaGl~GL~aA~~La~~G~-~VlvlE~~~ 55 (407)
|+...|.|||+|..|.+.|..|+..|. +|.++|.+.
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 344679999999999999999999998 999999875
No 414
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=90.85 E-value=0.22 Score=46.96 Aligned_cols=33 Identities=21% Similarity=0.319 Sum_probs=30.3
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 015413 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (407)
Q Consensus 24 DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (407)
.|+|||+|..|..+|..+.+.|++|+++|.+..
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 589999999999999999999999999998753
No 415
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=90.81 E-value=0.18 Score=52.62 Aligned_cols=36 Identities=8% Similarity=0.153 Sum_probs=33.0
Q ss_pred ccEEEEC--CChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 015413 23 FDLIVIG--TGLPESVISAAASASGKSVLHLDPNPFYGS 59 (407)
Q Consensus 23 ~DVvVIG--aGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (407)
-.|+||| +|..|+-+|..|++.|.+|+++++.+ +..
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~ 566 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LAN 566 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTH
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-ccc
Confidence 3799998 99999999999999999999999998 654
No 416
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=90.76 E-value=0.23 Score=44.91 Aligned_cols=32 Identities=16% Similarity=0.316 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 24 DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
.|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 48999999999999999999999999998764
No 417
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=90.76 E-value=0.54 Score=45.14 Aligned_cols=60 Identities=15% Similarity=0.123 Sum_probs=46.0
Q ss_pred eEeecCCcchHHHHHHHHHHhcCcEEEeCCceeEEEEecC--CCcEEEEEeCCCcEEEcCEEEE
Q 015413 271 LIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQN--SGSYKGVRLASGQDILSHKLVL 332 (407)
Q Consensus 271 ~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~--~g~~~gV~~~~G~~i~Ad~VI~ 332 (407)
..+|..-..++.+.|.+.++..|++|+++++|++|..+.+ +++ +.|++.+| +++||+||+
T Consensus 101 ~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~-~~v~~~~g-~i~ad~VVl 162 (401)
T 2gqf_A 101 QLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVR-FVLQVNST-QWQCKNLIV 162 (401)
T ss_dssp EEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCC-EEEEETTE-EEEESEEEE
T ss_pred EEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCe-EEEEECCC-EEECCEEEE
Confidence 3456555678889999999999999999999999986410 233 57776666 799999994
No 418
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=90.74 E-value=0.27 Score=46.76 Aligned_cols=53 Identities=13% Similarity=0.144 Sum_probs=40.7
Q ss_pred chHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEe-CCCc--EEEcCEEE-EC
Q 015413 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL-ASGQ--DILSHKLV-LD 333 (407)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~-~~G~--~i~Ad~VI-~~ 333 (407)
..+.+.|.+.+...|++|+++++|++|..+ +++. +.|++ .+|+ +++||.|| ++
T Consensus 103 ~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~-~~~~-~~v~~~~~g~~~~~~a~~vV~Ad 159 (394)
T 1k0i_A 103 TEVTRDLMEAREACGATTVYQAAEVRLHDL-QGER-PYVTFERDGERLRLDCDYIAGCD 159 (394)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEECT-TSSS-CEEEEEETTEEEEEECSEEEECC
T ss_pred HHHHHHHHHHHHhcCCeEEeceeEEEEEEe-cCCc-eEEEEecCCcEEEEEeCEEEECC
Confidence 466777888888889999999999999874 1233 45666 6887 79999999 44
No 419
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=90.73 E-value=0.5 Score=48.06 Aligned_cols=51 Identities=12% Similarity=0.188 Sum_probs=42.9
Q ss_pred chHHHHHHHHHHh-cCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 015413 279 GELPQAFCRRAAV-KGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (407)
Q Consensus 279 ~~l~~al~r~~~~-~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (407)
..+.+.|.+.++. .|.+| +++.|+.|..+ ++++++|.+.+|++++||.||+
T Consensus 123 ~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e--~g~V~GV~t~dG~~i~AdaVVL 174 (637)
T 2zxi_A 123 KRYREYMKKVCENQENLYI-KQEEVVDIIVK--NNQVVGVRTNLGVEYKTKAVVV 174 (637)
T ss_dssp HHHHHHHHHHHHTCTTEEE-EESCEEEEEES--SSBEEEEEETTSCEEECSEEEE
T ss_pred HHHHHHHHHHHHhCCCCEE-EEeEEEEEEec--CCEEEEEEECCCcEEEeCEEEE
Confidence 4577888888777 58888 68899999886 7788899999999999999995
No 420
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=90.72 E-value=0.12 Score=55.64 Aligned_cols=37 Identities=16% Similarity=0.116 Sum_probs=34.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG 59 (407)
-.|+|||+|..|+-+|..|++.|.+|+|+|+++++..
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~~ 321 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSISA 321 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCCH
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccch
Confidence 3699999999999999999999999999999998754
No 421
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=90.72 E-value=0.22 Score=47.54 Aligned_cols=33 Identities=24% Similarity=0.308 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
-.|+|||+|-.|+.+|..|...|.+|+++|++.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999874
No 422
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=90.59 E-value=0.12 Score=45.48 Aligned_cols=32 Identities=6% Similarity=-0.030 Sum_probs=29.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
..++|+|+|..|...|..|.+.|+ |+++|++.
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 369999999999999999999999 99999864
No 423
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=90.58 E-value=0.44 Score=48.61 Aligned_cols=41 Identities=22% Similarity=0.169 Sum_probs=37.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcc
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~ 61 (407)
.++||||||||++||+||+.|+++|.+|+||||....||.+
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g~s 57 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHT 57 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGG
T ss_pred ccCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCCCc
Confidence 46899999999999999999999999999999988776643
No 424
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=90.56 E-value=0.21 Score=44.75 Aligned_cols=32 Identities=9% Similarity=0.240 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHHHHhhCC-CeEEEEccCC
Q 015413 24 DLIVIGTGLPESVISAAASASG-KSVLHLDPNP 55 (407)
Q Consensus 24 DVvVIGaGl~GL~aA~~La~~G-~~VlvlE~~~ 55 (407)
.|.|||+|.-|...|..|+++| ++|.+++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 4899999999999999999999 9999998863
No 425
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=90.45 E-value=0.49 Score=46.86 Aligned_cols=52 Identities=19% Similarity=0.111 Sum_probs=41.1
Q ss_pred chHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCc---EEEcCEEE-EC
Q 015413 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ---DILSHKLV-LD 333 (407)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~---~i~Ad~VI-~~ 333 (407)
..+-+.|.+.+++.|++|+++++|++|+++ ++. +.|++.++. +++||.|| ++
T Consensus 106 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~--~~~-v~v~~~~~~g~~~~~a~~vVgAD 161 (500)
T 2qa1_A 106 SVTETHLEQWATGLGADIRRGHEVLSLTDD--GAG-VTVEVRGPEGKHTLRAAYLVGCD 161 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCEEEEEEEE--TTE-EEEEEEETTEEEEEEESEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEECCcEEEEEEEc--CCe-EEEEEEcCCCCEEEEeCEEEECC
Confidence 356677778888889999999999999987 444 357666664 79999999 54
No 426
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=90.44 E-value=0.26 Score=44.82 Aligned_cols=34 Identities=18% Similarity=0.169 Sum_probs=31.1
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC---eEEEEccCC
Q 015413 22 AFDLIVIGTGLPESVISAAASASGK---SVLHLDPNP 55 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G~---~VlvlE~~~ 55 (407)
...|.|||+|.-|...|..|+++|+ +|.+.+++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 3569999999999999999999999 999999875
No 427
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=90.43 E-value=0.24 Score=47.09 Aligned_cols=33 Identities=24% Similarity=0.314 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
..|+|+|+|-.|+.+|..|+..|.+|++++++.
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 469999999999999999999999999999864
No 428
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=90.42 E-value=0.24 Score=46.92 Aligned_cols=33 Identities=21% Similarity=0.285 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
-.|+|+|+|-.|+.++..|...|.+|++++++.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 469999999999999999999999999999864
No 429
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=90.40 E-value=0.33 Score=50.43 Aligned_cols=35 Identities=23% Similarity=0.290 Sum_probs=31.9
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 015413 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (407)
--.|.|||||..|.-.|..++.+|++|+++|.+..
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~ 350 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 350 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred ccEEEEEcccHHHHHHHHHHHhCCCchhcccchHh
Confidence 45799999999999999999999999999998753
No 430
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=90.31 E-value=0.25 Score=46.91 Aligned_cols=34 Identities=21% Similarity=0.237 Sum_probs=31.4
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCC-eEEEEccC
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGK-SVLHLDPN 54 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~-~VlvlE~~ 54 (407)
++..|+|+|||-+|..+|..|...|. +|+++|++
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 45689999999999999999999998 89999997
No 431
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=90.30 E-value=0.22 Score=54.07 Aligned_cols=33 Identities=24% Similarity=0.299 Sum_probs=30.9
Q ss_pred cEEEECCChhHHHHHHHHhhCCC-eEEEEccCCC
Q 015413 24 DLIVIGTGLPESVISAAASASGK-SVLHLDPNPF 56 (407)
Q Consensus 24 DVvVIGaGl~GL~aA~~La~~G~-~VlvlE~~~~ 56 (407)
+|+|||+|..|+-+|..|++.|. +|++++++++
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~ 367 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRKGF 367 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCG
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEecCh
Confidence 79999999999999999999996 9999999874
No 432
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=90.26 E-value=0.29 Score=45.31 Aligned_cols=33 Identities=21% Similarity=0.236 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC-eEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~-~VlvlE~~~ 55 (407)
..|.|||||..|...|..|+..|+ +|.++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 369999999999999999999997 999999864
No 433
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=90.23 E-value=0.26 Score=45.02 Aligned_cols=32 Identities=19% Similarity=0.209 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 24 DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
.|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 48999999999999999999999999998864
No 434
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=90.15 E-value=0.23 Score=46.19 Aligned_cols=32 Identities=19% Similarity=0.234 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhhCCC--eEEEEccCC
Q 015413 24 DLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (407)
Q Consensus 24 DVvVIGaGl~GL~aA~~La~~G~--~VlvlE~~~ 55 (407)
.|.|||+|..|...|..|+++|+ +|.++|.+.
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 58999999999999999999999 999999863
No 435
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=90.08 E-value=0.27 Score=45.80 Aligned_cols=36 Identities=25% Similarity=0.359 Sum_probs=31.1
Q ss_pred cccEEEECC-ChhHHHHHHHHhhCCCeEEEEccCCCC
Q 015413 22 AFDLIVIGT-GLPESVISAAASASGKSVLHLDPNPFY 57 (407)
Q Consensus 22 ~~DVvVIGa-Gl~GL~aA~~La~~G~~VlvlE~~~~~ 57 (407)
...|+|.|| |.-|...+..|.++|++|.++.++..-
T Consensus 19 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~ 55 (347)
T 4id9_A 19 SHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG 55 (347)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC
Confidence 456999998 999999999999999999999987643
No 436
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=90.07 E-value=0.29 Score=46.68 Aligned_cols=40 Identities=23% Similarity=0.254 Sum_probs=35.2
Q ss_pred cccEEEECC-ChhHHHHHHHHhhCCC---eEEEEccCC-CCCCcc
Q 015413 22 AFDLIVIGT-GLPESVISAAASASGK---SVLHLDPNP-FYGSHF 61 (407)
Q Consensus 22 ~~DVvVIGa-Gl~GL~aA~~La~~G~---~VlvlE~~~-~~GG~~ 61 (407)
...|+|||+ |..|+.|+..+..-|. +|+++|.+. .-||+.
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~g~~~ 258 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSRGGPF 258 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTTCSCC
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccccccCCch
Confidence 457999999 9999999999999997 999999986 457763
No 437
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=90.07 E-value=0.53 Score=42.89 Aligned_cols=46 Identities=13% Similarity=0.041 Sum_probs=34.3
Q ss_pred CCCCCCCCCCCCcccEEEECC-ChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 10 LPVPPYPPIEPTAFDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 10 ~~~~~~~~~~~~~~DVvVIGa-Gl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
++-|..+...+...-|+|.|| |--|...|..|+++|++|+++.++.
T Consensus 14 ~~~~~~~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~ 60 (302)
T 1w6u_A 14 LQKAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKM 60 (302)
T ss_dssp CCSCCSCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred ccCCCCCcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 444444444444455888875 6789999999999999999998764
No 438
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=90.04 E-value=0.28 Score=44.67 Aligned_cols=33 Identities=15% Similarity=0.279 Sum_probs=30.4
Q ss_pred ccEEEECC-ChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 23 FDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGa-Gl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
..|.|||+ |.-|...|..|+++|++|++++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 36999999 9999999999999999999998764
No 439
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=89.98 E-value=0.35 Score=41.04 Aligned_cols=33 Identities=21% Similarity=0.225 Sum_probs=29.9
Q ss_pred ccEEEECC-ChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 23 FDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGa-Gl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
..|+|+|| |.-|...+..|.++|++|.++.++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 35999998 9999999999999999999998864
No 440
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=89.97 E-value=0.54 Score=46.52 Aligned_cols=52 Identities=13% Similarity=0.114 Sum_probs=41.0
Q ss_pred chHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCc---EEEcCEEE-EC
Q 015413 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ---DILSHKLV-LD 333 (407)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~---~i~Ad~VI-~~ 333 (407)
..+-+.|.+.+++.|++|+++++|++|+.+ ++. +.|++.++. +++||.|| ++
T Consensus 107 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~--~~~-v~v~~~~~~g~~~~~a~~vVgAD 162 (499)
T 2qa2_A 107 STTESVLEEWALGRGAELLRGHTVRALTDE--GDH-VVVEVEGPDGPRSLTTRYVVGCD 162 (499)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCEEEEEEEC--SSC-EEEEEECSSCEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEe--CCE-EEEEEEcCCCcEEEEeCEEEEcc
Confidence 356677778888889999999999999986 444 357766765 79999999 54
No 441
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=89.97 E-value=0.27 Score=44.90 Aligned_cols=33 Identities=27% Similarity=0.366 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
..|.|||+|..|...|..|+++|++|.+++++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 369999999999999999999999999998864
No 442
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=89.92 E-value=0.29 Score=45.65 Aligned_cols=33 Identities=24% Similarity=0.324 Sum_probs=30.1
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC--eEEEEccC
Q 015413 22 AFDLIVIGTGLPESVISAAASASGK--SVLHLDPN 54 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G~--~VlvlE~~ 54 (407)
...|.|||+|..|.+.|..|+..|. +|.++|.+
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 3579999999999999999999997 89999985
No 443
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=89.92 E-value=0.31 Score=45.32 Aligned_cols=34 Identities=12% Similarity=0.189 Sum_probs=30.7
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC--eEEEEccCC
Q 015413 22 AFDLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G~--~VlvlE~~~ 55 (407)
...|.|||+|..|.+.|..|+..|. .|.++|.+.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3689999999999999999999998 999999874
No 444
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=89.86 E-value=0.28 Score=48.56 Aligned_cols=33 Identities=18% Similarity=0.185 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
..|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999999999999864
No 445
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=89.84 E-value=0.25 Score=45.62 Aligned_cols=32 Identities=22% Similarity=0.378 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHhhCC--CeEEEEccCC
Q 015413 24 DLIVIGTGLPESVISAAASASG--KSVLHLDPNP 55 (407)
Q Consensus 24 DVvVIGaGl~GL~aA~~La~~G--~~VlvlE~~~ 55 (407)
.|.|||+|..|...|..|+++| .+|.++|++.
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 6999999999999999999999 7999999864
No 446
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=89.83 E-value=0.31 Score=44.13 Aligned_cols=32 Identities=22% Similarity=0.480 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHhhCCC--eEEEEccCC
Q 015413 24 DLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (407)
Q Consensus 24 DVvVIGaGl~GL~aA~~La~~G~--~VlvlE~~~ 55 (407)
.|.|||+|.-|...|..|+++|+ +|++++++.
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 58999999999999999999999 999998864
No 447
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=89.79 E-value=0.25 Score=51.13 Aligned_cols=39 Identities=15% Similarity=0.121 Sum_probs=35.3
Q ss_pred ccEEEEC--CChhHHHHHHHHhhCCCeEEEEccCCCCCCcc
Q 015413 23 FDLIVIG--TGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (407)
Q Consensus 23 ~DVvVIG--aGl~GL~aA~~La~~G~~VlvlE~~~~~GG~~ 61 (407)
-+|+||| +|..|+-+|..|++.|.+|+++++.+++....
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~ 564 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWT 564 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGG
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccccccc
Confidence 3599999 99999999999999999999999999887654
No 448
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=89.76 E-value=0.3 Score=48.21 Aligned_cols=33 Identities=15% Similarity=0.176 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
.+|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 369999999999999999999999999998863
No 449
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=89.74 E-value=0.34 Score=41.67 Aligned_cols=32 Identities=28% Similarity=0.344 Sum_probs=29.1
Q ss_pred cEEEECC-ChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 24 DLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 24 DVvVIGa-Gl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
.|+|+|| |.-|...+..|.++|++|.++.++.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 4899995 9999999999999999999998864
No 450
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=89.71 E-value=0.27 Score=43.97 Aligned_cols=34 Identities=18% Similarity=0.244 Sum_probs=30.3
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC-eEEEEccCC
Q 015413 22 AFDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G~-~VlvlE~~~ 55 (407)
...|+|||+|=.|..+|..|+++|. +++++|...
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 3579999999999999999999996 899999853
No 451
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=89.70 E-value=0.32 Score=43.48 Aligned_cols=33 Identities=15% Similarity=0.200 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
..|.|||+|.-|...|..|++.|++|.+++++.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 469999999999999999999999999999864
No 452
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=89.69 E-value=0.29 Score=44.12 Aligned_cols=33 Identities=27% Similarity=0.426 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
..|+|.|||.-|...+..|.++|++|.++.++.
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 369999999999999999999999999998764
No 453
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=89.65 E-value=0.22 Score=47.37 Aligned_cols=33 Identities=21% Similarity=0.295 Sum_probs=30.9
Q ss_pred cEEEECCChhHHHHHHHHhhCC-------CeEEEEccCCC
Q 015413 24 DLIVIGTGLPESVISAAASASG-------KSVLHLDPNPF 56 (407)
Q Consensus 24 DVvVIGaGl~GL~aA~~La~~G-------~~VlvlE~~~~ 56 (407)
.|.|||+|.-|...|..|+++| ++|++++++..
T Consensus 23 kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 23 KISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred EEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 6999999999999999999999 99999998765
No 454
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=89.62 E-value=0.26 Score=51.24 Aligned_cols=33 Identities=24% Similarity=0.351 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
..|.|||+|.-|...|..|+++|++|+++|++.
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 359999999999999999999999999999875
No 455
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=89.61 E-value=0.31 Score=45.18 Aligned_cols=42 Identities=19% Similarity=0.177 Sum_probs=33.4
Q ss_pred cccEEEECCC-hhHHHHHHHHhhCCCeEEEEccC--------CCCCCcccc
Q 015413 22 AFDLIVIGTG-LPESVISAAASASGKSVLHLDPN--------PFYGSHFSS 63 (407)
Q Consensus 22 ~~DVvVIGaG-l~GL~aA~~La~~G~~VlvlE~~--------~~~GG~~~t 63 (407)
...|+|||+| +.|..+|..|...|.+|++++++ ..+++..++
T Consensus 177 gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~ 227 (320)
T 1edz_A 177 GKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHH 227 (320)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCE
T ss_pred CCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhccc
Confidence 4579999999 67999999999999999988654 555654443
No 456
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=89.51 E-value=0.3 Score=48.11 Aligned_cols=32 Identities=19% Similarity=0.262 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 24 DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
+|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 69999999999999999999999999998863
No 457
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=89.50 E-value=0.32 Score=48.71 Aligned_cols=34 Identities=21% Similarity=0.289 Sum_probs=31.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (407)
..|+|||+|.+|+-.|..|++.|.+|+++++.+.
T Consensus 187 k~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~ 220 (542)
T 1w4x_A 187 QRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPH 220 (542)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CEEEEECCCccHHHHHHHHhhcCceEEEEEcCCc
Confidence 4699999999999999999999999999998654
No 458
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=89.49 E-value=0.24 Score=44.92 Aligned_cols=33 Identities=6% Similarity=0.139 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
..++|+|+|-.|..+|..|++.|.+|+|+.++.
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 469999999999999999999999999998763
No 459
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=89.49 E-value=0.29 Score=47.94 Aligned_cols=34 Identities=12% Similarity=0.075 Sum_probs=31.1
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccC
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~ 54 (407)
+...|+|||+|-.|...|..|.++|.+|+|++.+
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 3457999999999999999999999999999975
No 460
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=89.40 E-value=0.66 Score=42.04 Aligned_cols=52 Identities=8% Similarity=0.052 Sum_probs=40.2
Q ss_pred chHHHHHHHHHHh-cCcEEEeCCceeEEEEecCCCcEEEEEeC---------CC-----cEEEcCEEEE
Q 015413 279 GELPQAFCRRAAV-KGCLYVLRMPVISLLTDQNSGSYKGVRLA---------SG-----QDILSHKLVL 332 (407)
Q Consensus 279 ~~l~~al~r~~~~-~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~---------~G-----~~i~Ad~VI~ 332 (407)
.++.+.|.+.+.+ .|.++++++.|++|..+ ++++.+|.+. +| .+++||.||.
T Consensus 119 ~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~--~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~ 185 (284)
T 1rp0_A 119 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVK--GNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVS 185 (284)
T ss_dssp HHHHHHHHHHHHTSTTEEEEETEEEEEEEEE--TTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEcCcEEEEEEec--CCeEEEEEEeccccccccCccccCceEEEECCEEEE
Confidence 4666777776665 69999999999999986 6777777653 32 5799999994
No 461
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=89.37 E-value=0.6 Score=47.64 Aligned_cols=51 Identities=16% Similarity=0.135 Sum_probs=42.3
Q ss_pred chHHHHHHHHHHh-cCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 015413 279 GELPQAFCRRAAV-KGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (407)
Q Consensus 279 ~~l~~al~r~~~~-~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (407)
..+.+.|.+.++. .|.+| +++.|+.|..+ ++++++|.+.+|.+++||.||+
T Consensus 124 ~~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e--~g~V~GV~t~dG~~I~Ad~VVL 175 (651)
T 3ces_A 124 VLYRQAVRTALENQPNLMI-FQQAVEDLIVE--NDRVVGAVTQMGLKFRAKAVVL 175 (651)
T ss_dssp HHHHHHHHHHHHTCTTEEE-EECCEEEEEES--SSBEEEEEETTSEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCCEE-EEEEEEEEEec--CCEEEEEEECCCCEEECCEEEE
Confidence 3577888887777 68888 68899999886 6788899988898899999994
No 462
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=89.35 E-value=0.36 Score=41.66 Aligned_cols=31 Identities=32% Similarity=0.464 Sum_probs=28.8
Q ss_pred cEEEECC-ChhHHHHHHHHhhCCCeEEEEccC
Q 015413 24 DLIVIGT-GLPESVISAAASASGKSVLHLDPN 54 (407)
Q Consensus 24 DVvVIGa-Gl~GL~aA~~La~~G~~VlvlE~~ 54 (407)
.|+|.|| |.-|...+..|.++|++|.++.++
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEec
Confidence 4899998 999999999999999999999876
No 463
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=89.29 E-value=0.39 Score=43.42 Aligned_cols=33 Identities=15% Similarity=0.313 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
..++|||+|-+|.++|..|++.|.+|.|+.|+.
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999997764
No 464
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=89.28 E-value=0.33 Score=46.24 Aligned_cols=33 Identities=33% Similarity=0.395 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
..|+|||+|-.|+.+|..|+..|.+|++++++.
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 469999999999999999999999999999764
No 465
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=89.22 E-value=0.4 Score=42.61 Aligned_cols=33 Identities=12% Similarity=0.206 Sum_probs=28.4
Q ss_pred cEEEECC-ChhHHHHHHHHhhCCCeEEEEccCCC
Q 015413 24 DLIVIGT-GLPESVISAAASASGKSVLHLDPNPF 56 (407)
Q Consensus 24 DVvVIGa-Gl~GL~aA~~La~~G~~VlvlE~~~~ 56 (407)
-|+|.|| |--|...|..|+++|++|+++.++..
T Consensus 24 ~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~ 57 (251)
T 3orf_A 24 NILVLGGSGALGAEVVKFFKSKSWNTISIDFREN 57 (251)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 4788886 56799999999999999999998754
No 466
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=89.19 E-value=0.32 Score=44.08 Aligned_cols=31 Identities=13% Similarity=0.082 Sum_probs=28.7
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 24 DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
.|.|||+|.-|...|..|++ |++|.+++++.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 58999999999999999999 99999998864
No 467
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=89.13 E-value=0.32 Score=42.16 Aligned_cols=33 Identities=24% Similarity=0.367 Sum_probs=30.0
Q ss_pred ccEEEECC-ChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 23 FDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGa-Gl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
..|+|.|| |.-|...+..|.++|++|.++.++.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 46999995 9999999999999999999999874
No 468
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=88.98 E-value=0.31 Score=44.33 Aligned_cols=34 Identities=9% Similarity=0.175 Sum_probs=30.0
Q ss_pred cccEEEECCChhHHHHHHHHhhC--CCeEEEEccCC
Q 015413 22 AFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNP 55 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~--G~~VlvlE~~~ 55 (407)
...|.|||+|.-|...|..|+++ |++|.+++++.
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 41 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSD 41 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSH
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCH
Confidence 35799999999999999999988 68999998763
No 469
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=88.90 E-value=0.34 Score=47.39 Aligned_cols=38 Identities=16% Similarity=0.157 Sum_probs=32.4
Q ss_pred ccEEEECCChhHHHHHHHHhhC--------------------C-CeEEEEccCCCCCCc
Q 015413 23 FDLIVIGTGLPESVISAAASAS--------------------G-KSVLHLDPNPFYGSH 60 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~--------------------G-~~VlvlE~~~~~GG~ 60 (407)
-.|+|||+|..|+-+|..|++. | .+|+++++++.+-..
T Consensus 148 ~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~ 206 (456)
T 1lqt_A 148 ARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAA 206 (456)
T ss_dssp SEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCC
T ss_pred CEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhhc
Confidence 4799999999999999999974 6 599999999876543
No 470
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=88.76 E-value=0.31 Score=44.75 Aligned_cols=33 Identities=12% Similarity=0.183 Sum_probs=27.4
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 015413 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (407)
Q Consensus 24 DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~~ 56 (407)
.|-+||-|..|..-|..|.++|++|++++++..
T Consensus 7 kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 7 KIAFLGLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred cEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 599999999999999999999999999997653
No 471
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=88.75 E-value=0.39 Score=44.98 Aligned_cols=33 Identities=18% Similarity=0.091 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
..|.|||+|.-|.+.|..|+++|++|++.+++.
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 359999999999999999999999999999875
No 472
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=88.73 E-value=0.34 Score=43.44 Aligned_cols=33 Identities=18% Similarity=0.218 Sum_probs=29.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCe-EEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKS-VLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~-VlvlE~~~ 55 (407)
..|.|||+|..|...|..|+++|++ |.+++++.
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 4699999999999999999999999 89998763
No 473
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=88.64 E-value=0.31 Score=44.38 Aligned_cols=32 Identities=19% Similarity=0.211 Sum_probs=29.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
..|.|||+|..|...|..|+++|++|.+++ +.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~ 35 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IG 35 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence 369999999999999999999999999998 54
No 474
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=88.63 E-value=0.9 Score=41.96 Aligned_cols=51 Identities=8% Similarity=-0.016 Sum_probs=40.6
Q ss_pred chHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 015413 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (407)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (407)
.++.+.+.+.++..|.++++++.|++|..+ ++.+.+|++.+| ++++|+||+
T Consensus 76 ~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~--~~~~~~v~~~~g-~~~~d~vV~ 126 (357)
T 4a9w_A 76 AEVLAYLAQYEQKYALPVLRPIRVQRVSHF--GERLRVVARDGR-QWLARAVIS 126 (357)
T ss_dssp HHHHHHHHHHHHHTTCCEECSCCEEEEEEE--TTEEEEEETTSC-EEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEC--CCcEEEEEeCCC-EEEeCEEEE
Confidence 466677777788899999999999999886 555333887666 899999994
No 475
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=88.61 E-value=0.52 Score=43.29 Aligned_cols=32 Identities=16% Similarity=0.129 Sum_probs=29.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC-eEEEEccC
Q 015413 23 FDLIVIGTGLPESVISAAASASGK-SVLHLDPN 54 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~-~VlvlE~~ 54 (407)
..|+|||+|-.|..+|..|++.|. +|+|+.++
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 469999999999999999999997 99999876
No 476
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=88.42 E-value=0.4 Score=46.82 Aligned_cols=32 Identities=16% Similarity=0.191 Sum_probs=29.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~ 54 (407)
..|+|+|+|..|...|..|++.|++|.+++++
T Consensus 4 k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~ 35 (450)
T 1ff9_A 4 KSVLMLGSGFVTRPTLDVLTDSGIKVTVACRT 35 (450)
T ss_dssp CEEEEECCSTTHHHHHHHHHTTTCEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHhCcCEEEEEECC
Confidence 46999999999999999999999999999875
No 477
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=88.36 E-value=0.52 Score=42.83 Aligned_cols=34 Identities=21% Similarity=0.290 Sum_probs=30.6
Q ss_pred cEEEECC-ChhHHHHHHHHhhCCCeEEEEccCCCC
Q 015413 24 DLIVIGT-GLPESVISAAASASGKSVLHLDPNPFY 57 (407)
Q Consensus 24 DVvVIGa-Gl~GL~aA~~La~~G~~VlvlE~~~~~ 57 (407)
.|+|.|| |+-|...+..|.++|++|.++-|+...
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~ 36 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP 36 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc
Confidence 4899998 999999999999999999999876544
No 478
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=88.33 E-value=0.53 Score=46.62 Aligned_cols=54 Identities=19% Similarity=0.193 Sum_probs=39.3
Q ss_pred cchHHHHHHHHHHhcC-cEEEeCCceeEEEEecCCC-cEEEEEeC--CC-----cEEEcCEEEE
Q 015413 278 QGELPQAFCRRAAVKG-CLYVLRMPVISLLTDQNSG-SYKGVRLA--SG-----QDILSHKLVL 332 (407)
Q Consensus 278 ~~~l~~al~r~~~~~G-g~i~l~~~V~~I~~~~~~g-~~~gV~~~--~G-----~~i~Ad~VI~ 332 (407)
-.....++.+.+...| .+|++++.|++|+.+. ++ ++++|++. +| .+++|+.||+
T Consensus 220 r~s~~~~~l~~a~~~~n~~i~~~~~V~~i~~~~-~g~~~~gV~~~~~~g~~~~~~~v~A~~VIl 282 (504)
T 1n4w_A 220 KQSLDKTYLAAALGTGKVTIQTLHQVKTIRQTK-DGGYALTVEQKDTDGKLLATKEISCRYLFL 282 (504)
T ss_dssp BCCTTTTHHHHHHHTTSEEEEESEEEEEEEECT-TSSEEEEEEEECTTCCEEEEEEEEEEEEEE
T ss_pred ccCHHHHHHHHHHhcCCcEEEeCCEEEEEEECC-CCCEEEEEEEeCCCCccceeEEEeeCEEEE
Confidence 4444455555566665 8999999999999862 34 78899874 56 3589998884
No 479
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=88.30 E-value=0.38 Score=43.32 Aligned_cols=32 Identities=19% Similarity=0.091 Sum_probs=26.3
Q ss_pred cEEEECC-ChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 24 DLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 24 DVvVIGa-Gl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
-|+|.|| |--|...|..|+++|.+|+++.+++
T Consensus 30 ~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~ 62 (269)
T 4dmm_A 30 IALVTGASRGIGRAIALELAAAGAKVAVNYASS 62 (269)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 3677776 5678999999999999999988753
No 480
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=88.24 E-value=0.72 Score=43.60 Aligned_cols=35 Identities=20% Similarity=0.256 Sum_probs=31.1
Q ss_pred cccEEEECC-ChhHHHHHHHHhhCCCeEEEEccCCC
Q 015413 22 AFDLIVIGT-GLPESVISAAASASGKSVLHLDPNPF 56 (407)
Q Consensus 22 ~~DVvVIGa-Gl~GL~aA~~La~~G~~VlvlE~~~~ 56 (407)
+..|+|.|| |.-|...+..|.++|++|.++.++..
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 64 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHEGHYVIASDWKKN 64 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCc
Confidence 356999998 99999999999999999999988753
No 481
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=88.22 E-value=0.42 Score=44.35 Aligned_cols=34 Identities=15% Similarity=0.237 Sum_probs=30.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCC--eEEEEccC
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGK--SVLHLDPN 54 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~--~VlvlE~~ 54 (407)
....|+|||+|..|.+.|..|+..|. .|.++|.+
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 34689999999999999999999985 89999976
No 482
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=88.21 E-value=0.64 Score=46.30 Aligned_cols=51 Identities=20% Similarity=0.169 Sum_probs=40.7
Q ss_pred chHHHHHHHHHHhcCcEEEeCCceeEEEEecCCC----cEEEEEeCCC---cEEEcCEEEE
Q 015413 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSG----SYKGVRLASG---QDILSHKLVL 332 (407)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g----~~~gV~~~~G---~~i~Ad~VI~ 332 (407)
..+-+.|.+.+++.|++|+++++|++|+.+ ++ . +.|++.++ .+++||.||.
T Consensus 120 ~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~--~~~~~~~-v~v~~~~~~~~~~i~a~~vV~ 177 (535)
T 3ihg_A 120 DKLEPILLAQARKHGGAIRFGTRLLSFRQH--DDDAGAG-VTARLAGPDGEYDLRAGYLVG 177 (535)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEEE--CGGGCSE-EEEEEEETTEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEC--CCCcccc-EEEEEEcCCCeEEEEeCEEEE
Confidence 466777888888899999999999999987 33 3 45666665 6799999993
No 483
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=88.21 E-value=0.39 Score=43.55 Aligned_cols=32 Identities=19% Similarity=0.302 Sum_probs=29.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~ 54 (407)
..|+|||+|-.|...|..|++.|.+|++++++
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~ 161 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRT 161 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECC
Confidence 46999999999999999999999999999876
No 484
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=88.19 E-value=0.46 Score=42.16 Aligned_cols=33 Identities=15% Similarity=0.118 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC----eEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGK----SVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~----~VlvlE~~~ 55 (407)
..|.|||+|.-|...|..|+++|+ +|.+++++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 369999999999999999999998 999999874
No 485
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=88.17 E-value=0.44 Score=46.76 Aligned_cols=34 Identities=24% Similarity=0.234 Sum_probs=30.9
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
...|+|+|+|-.|..+|..|++.|.+|++.|.+.
T Consensus 265 GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 265 GKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3469999999999999999999999999998864
No 486
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=88.08 E-value=0.47 Score=43.55 Aligned_cols=34 Identities=21% Similarity=0.195 Sum_probs=31.0
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
...|.|||+|-.|..+|..|...|.+|++++++.
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 3569999999999999999999999999999863
No 487
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=88.05 E-value=0.8 Score=46.49 Aligned_cols=52 Identities=15% Similarity=0.201 Sum_probs=42.8
Q ss_pred chHHHHHHHHHHhcC-cEEEeCCceeEEEEecCCCcEEEEEe---CCCc--EEEcCEEEE
Q 015413 279 GELPQAFCRRAAVKG-CLYVLRMPVISLLTDQNSGSYKGVRL---ASGQ--DILSHKLVL 332 (407)
Q Consensus 279 ~~l~~al~r~~~~~G-g~i~l~~~V~~I~~~~~~g~~~gV~~---~~G~--~i~Ad~VI~ 332 (407)
..|.++|.+.+...| .+|++++.|++|..+ ++++++|.. .+|+ +++|+.||+
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~--~g~v~Gv~~~~~~~G~~~~i~A~~VVl 191 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVD--DGHVRGLVAMNMMEGTLVQIRANAVVM 191 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEE--TTEEEEEEEEETTTTEEEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEe--CCEEEEEEEEEcCCCcEEEEEcCeEEE
Confidence 467888888888888 999999999999987 677777753 5676 689999984
No 488
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=87.99 E-value=0.41 Score=42.80 Aligned_cols=30 Identities=17% Similarity=0.169 Sum_probs=27.8
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEEcc
Q 015413 24 DLIVIGTGLPESVISAAASASGKSVLHLDP 53 (407)
Q Consensus 24 DVvVIGaGl~GL~aA~~La~~G~~VlvlE~ 53 (407)
.|.|||+|..|...|..|+++|++|++.++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 489999999999999999999999999765
No 489
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=87.96 E-value=0.5 Score=42.21 Aligned_cols=35 Identities=11% Similarity=0.060 Sum_probs=29.2
Q ss_pred CcccEEEECC---ChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 21 TAFDLIVIGT---GLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 21 ~~~DVvVIGa---Gl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
...-|+|.|| |--|...|..|+++|.+|+++.+++
T Consensus 13 ~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~ 50 (271)
T 3ek2_A 13 DGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGD 50 (271)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecch
Confidence 3456899996 4678999999999999999998774
No 490
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=87.86 E-value=0.43 Score=43.51 Aligned_cols=31 Identities=6% Similarity=0.263 Sum_probs=28.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~ 54 (407)
..++|+|+|-.|..+|..|++.| +|++..++
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKDN-NIIIANRT 159 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSSS-EEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEEEECC
Confidence 46999999999999999999999 99999775
No 491
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=87.63 E-value=0.78 Score=43.76 Aligned_cols=49 Identities=14% Similarity=0.062 Sum_probs=39.1
Q ss_pred chHHHHHHHHHHhcCcEEEeCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 015413 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (407)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (407)
..+-+.|.+.+.. ++|+++++|++|+.+ ++. +.|++.+|++++||.||.
T Consensus 127 ~~l~~~L~~~~~~--~~i~~~~~v~~i~~~--~~~-v~v~~~~g~~~~a~~vV~ 175 (407)
T 3rp8_A 127 AELQREMLDYWGR--DSVQFGKRVTRCEED--ADG-VTVWFTDGSSASGDLLIA 175 (407)
T ss_dssp HHHHHHHHHHHCG--GGEEESCCEEEEEEE--TTE-EEEEETTSCEEEESEEEE
T ss_pred HHHHHHHHHhCCc--CEEEECCEEEEEEec--CCc-EEEEEcCCCEEeeCEEEE
Confidence 4566677766655 889999999999987 454 568888999999999993
No 492
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=87.50 E-value=0.46 Score=43.60 Aligned_cols=32 Identities=16% Similarity=0.101 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhhCCC--eEEEEccCC
Q 015413 24 DLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (407)
Q Consensus 24 DVvVIGaGl~GL~aA~~La~~G~--~VlvlE~~~ 55 (407)
.|.|||+|..|.+.|..|++.|. +|.++|.+.
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 58999999999999999999998 999999865
No 493
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=87.48 E-value=0.54 Score=42.19 Aligned_cols=32 Identities=22% Similarity=0.356 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 24 DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
.++|||+|-.|...|..|.+.|.+|++++++.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 79999999999999999999999999998763
No 494
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=87.48 E-value=0.54 Score=42.99 Aligned_cols=34 Identities=18% Similarity=0.158 Sum_probs=30.9
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 22 ~~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
...|.|||+|-.|..+|..|+..|.+|++++++.
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3469999999999999999999999999999864
No 495
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=87.47 E-value=0.52 Score=43.90 Aligned_cols=36 Identities=11% Similarity=0.196 Sum_probs=30.7
Q ss_pred CCcccEEEECC-ChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 20 PTAFDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 20 ~~~~DVvVIGa-Gl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
|....|+|.|| |.-|...+..|.+.|++|.++.++.
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 33457999998 9999999999999999999999875
No 496
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=87.46 E-value=0.56 Score=43.99 Aligned_cols=35 Identities=23% Similarity=0.316 Sum_probs=30.3
Q ss_pred CcccEEEECC-ChhHHHHHHHHhhCCC--eEEEEccCC
Q 015413 21 TAFDLIVIGT-GLPESVISAAASASGK--SVLHLDPNP 55 (407)
Q Consensus 21 ~~~DVvVIGa-Gl~GL~aA~~La~~G~--~VlvlE~~~ 55 (407)
....|+|||+ |..|.++|+.|+..|. .|.++|.+.
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~ 44 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFA 44 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCH
T ss_pred CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCc
Confidence 3467999998 9999999999999995 899999753
No 497
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=87.34 E-value=0.48 Score=41.50 Aligned_cols=34 Identities=9% Similarity=0.162 Sum_probs=30.1
Q ss_pred cccEEEEC-CChhHHHHHHHHhhCC-CeEEEEccCC
Q 015413 22 AFDLIVIG-TGLPESVISAAASASG-KSVLHLDPNP 55 (407)
Q Consensus 22 ~~DVvVIG-aGl~GL~aA~~La~~G-~~VlvlE~~~ 55 (407)
+..|+|.| +|.-|...|..|+++| ++|+++.++.
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~ 58 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQP 58 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSG
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcCh
Confidence 35699999 6999999999999999 8999998764
No 498
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=87.23 E-value=0.68 Score=43.20 Aligned_cols=34 Identities=12% Similarity=0.097 Sum_probs=30.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCC--eEEEEccC
Q 015413 21 TAFDLIVIGTGLPESVISAAASASGK--SVLHLDPN 54 (407)
Q Consensus 21 ~~~DVvVIGaGl~GL~aA~~La~~G~--~VlvlE~~ 54 (407)
....|.|||+|..|.+.|..|+.+|. .|.++|.+
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 34579999999999999999999998 89999986
No 499
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=87.12 E-value=0.5 Score=43.52 Aligned_cols=34 Identities=26% Similarity=0.234 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC--eEEEEccCCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGK--SVLHLDPNPF 56 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~--~VlvlE~~~~ 56 (407)
..|.|||||..|...|..|+.+|. .|.++|.+..
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~ 50 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSEG 50 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC--
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcc
Confidence 579999999999999999999999 9999999863
No 500
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=87.08 E-value=0.82 Score=43.50 Aligned_cols=33 Identities=27% Similarity=0.380 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 015413 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (407)
Q Consensus 23 ~DVvVIGaGl~GL~aA~~La~~G~~VlvlE~~~ 55 (407)
..|.|||+|-.|...|..+.+.|++|.+++.+.
T Consensus 15 k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~ 47 (389)
T 3q2o_A 15 KTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTK 47 (389)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 479999999999999999999999999998764
Done!